Murinae	ANCESTRAL SPECIES	12	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #29	ENSGT00940000155951.b #30	ENSGT00940000160857 #31	ENSGT00940000160022 #32	ENSGT00940000156074 #33	ENSGT00940000157059 #34	ENSGT00940000157103 #35	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B
Mus	ANCESTRAL SPECIES	14	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #29	ENSGT00940000155951.b #30	ENSGT00940000160857 #31	ENSGT00940000160022 #32	ENSGT00940000156074 #33	ENSGT00940000157059 #34	ENSGT00940000157103 #35	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #29	ENSGT00940000155951.b #30	ENSGT00940000160857 #31	ENSGT00940000160022 #32	ENSGT00940000156074 #33	ENSGT00940000157059 #34	ENSGT00940000157103 #35	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #29	ENSGT00940000155951.b #30	ENSGT00940000160857 #31	ENSGT00940000160022 #32	ENSGT00940000156074 #33	ENSGT00940000157059 #34	ENSGT00940000157103 #35	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278 #28	ENSGT00390000017860.b #29	ENSGT00940000155951.b #30	ENSGT00940000160857 #31	ENSGT00940000160022 #32	ENSGT00940000156074 #33	ENSGT00940000157059 #34	ENSGT00940000157103 #35	ENSGT00940000156728 #36	ENSGT00390000018121 #37	ENSGT00940000154245.B
spretus	MODERN SPECIES	14	Kdr (MGP_SPRETEiJ_G0028305) #7	Kit (MGP_SPRETEiJ_G0028304) #8	Pdgfra (MGP_SPRETEiJ_G0028303) #9	Gsx2 (MGP_SPRETEiJ_G0028302) #10	Chic2 (MGP_SPRETEiJ_G0028301) #11	Lnx1 (MGP_SPRETEiJ_G0028300) #12	Fip1l1 (MGP_SPRETEiJ_G0028299) #13	Scfd2 (MGP_SPRETEiJ_G0028298) #14	Rasl11b (MGP_SPRETEiJ_G0028297) #15	Usp46 (MGP_SPRETEiJ_G0028296) #16	Spata18 (MGP_SPRETEiJ_G0028295) #17	Sgcb (MGP_SPRETEiJ_G0028294) #18	MGP_SPRETEiJ_G0028293 #19	Dcun1d4 (MGP_SPRETEiJ_G0028292) #20	Cwh43 (MGP_SPRETEiJ_G0028291) #21	Ociad2 (MGP_SPRETEiJ_G0028290) #22	Ociad1 (MGP_SPRETEiJ_G0028289) #23	Fryl (MGP_SPRETEiJ_G0028288) #24	MGP_SPRETEiJ_G0028287 #25	Slc10a4-ps (MGP_SPRETEiJ_G0028286) #26	MGP_SPRETEiJ_G0028285 #27	Gm10135 (MGP_SPRETEiJ_G0028284) #28	Slain2 (MGP_SPRETEiJ_G0028283) #29	Tec (MGP_SPRETEiJ_G0028282) #30	Txk (MGP_SPRETEiJ_G0028281) #31	Nipal1 (MGP_SPRETEiJ_G0028280) #32	Cnga1 (MGP_SPRETEiJ_G0028279) #33	Nfxl1 (MGP_SPRETEiJ_G0028278) #34	Corin (MGP_SPRETEiJ_G0028277) #35	MGP_SPRETEiJ_G0009414 #36	Commd8 (MGP_SPRETEiJ_G0028276) #37
Steppe mouse	MODERN SPECIES	274	Gsx2 (ENSMSIG00000026518) #10	Chic2 (ENSMSIG00000026507) #11	ENSMSIG00000026501	Lnx1 (ENSMSIG00000026465) #12	Fip1l1 (ENSMSIG00000026147) #13	Scfd2 (ENSMSIG00000026110) #14	Rasl11b (ENSMSIG00000026099) #15	ENSMSIG00000026077	Usp46 (ENSMSIG00000026049) #16	ENSMSIG00000026041	Spata18 (ENSMSIG00000025979) #17	Sgcb (ENSMSIG00000025957) #18	Lrrc66 (ENSMSIG00000025948)	Dcun1d4 (ENSMSIG00000025811) #20	Cwh43 (ENSMSIG00000025727) #21	ENSMSIG00000025682 #22	Ociad1 (ENSMSIG00000025586) #23	Fryl (ENSMSIG00000025235) #24	Zar1 (ENSMSIG00000025195) #25	ENSMSIG00000025179 #26	Gm10135 (ENSMSIG00000025164) #28	Slain2 (ENSMSIG00000025122) #29	Tec (ENSMSIG00000025047) #30	Txk (ENSMSIG00000024944) #31	Nipal1 (ENSMSIG00000024929) #32	ENSMSIG00000024923
Mouse	MODERN SPECIES	14	Kdr (ENSMUSG00000062960) #7	Kit (ENSMUSG00000005672) #8	Pdgfra (ENSMUSG00000029231) #9	Gsx2 (ENSMUSG00000035946) #10	Chic2 (ENSMUSG00000029229) #11	Lnx1 (ENSMUSG00000029228) #12	Fip1l1 (ENSMUSG00000029227) #13	Scfd2 (ENSMUSG00000062110) #14	Rasl11b (ENSMUSG00000049907) #15	Usp46 (ENSMUSG00000054814) #16	Spata18 (ENSMUSG00000029155) #17	Sgcb (ENSMUSG00000029156) #18	Lrrc66 (ENSMUSG00000067206)	Dcun1d4 (ENSMUSG00000051674) #20	Cwh43 (ENSMUSG00000029154) #21	Ociad2 (ENSMUSG00000029153) #22	Ociad1 (ENSMUSG00000029152) #23	Fryl (ENSMUSG00000070733) #24	Slc10a4 (ENSMUSG00000029219) #26	Gm10135 (ENSMUSG00000063656) #28	Slain2 (ENSMUSG00000036087) #29	Tec (ENSMUSG00000029217) #30	Txk (ENSMUSG00000054892) #31	Nipal1 (ENSMUSG00000067219) #32	Cnga1 (ENSMUSG00000067220) #33	Slc10a4-ps (ENSMUSG00000060204) #26	Zar1 (ENSMUSG00000063935) #25	Nfxl1 (ENSMUSG00000072889) #34	Corin (ENSMUSG00000005220) #35	Atp10d (ENSMUSG00000046808) #36	Commd8 (ENSMUSG00000029213) #37
Ryukyu mouse	MODERN SPECIES	14	Kit (MGP_CAROLIEiJ_G0027310) #8	Pdgfra (MGP_CAROLIEiJ_G0027309) #9	Bicdl1 (MGP_CAROLIEiJ_G0027308)	Gsx2 (MGP_CAROLIEiJ_G0027307) #10	Chic2 (MGP_CAROLIEiJ_G0027306) #11	Lnx1 (MGP_CAROLIEiJ_G0027305) #12	Fip1l1 (MGP_CAROLIEiJ_G0027304) #13	Scfd2 (MGP_CAROLIEiJ_G0027303) #14	Rasl11b (MGP_CAROLIEiJ_G0027302) #15	Usp46 (MGP_CAROLIEiJ_G0027301) #16	Spata18 (MGP_CAROLIEiJ_G0027300) #17	Sgcb (MGP_CAROLIEiJ_G0027299) #18	MGP_CAROLIEiJ_G0027298 #19	Dcun1d4 (MGP_CAROLIEiJ_G0027297) #20	Cwh43 (MGP_CAROLIEiJ_G0027296) #21	Ociad2 (MGP_CAROLIEiJ_G0027295) #22	Ociad1 (MGP_CAROLIEiJ_G0027294) #23	Fryl (MGP_CAROLIEiJ_G0027293) #24	Gm10135 (MGP_CAROLIEiJ_G0027292) #28	Slain2 (MGP_CAROLIEiJ_G0027291) #29	Tec (MGP_CAROLIEiJ_G0027290) #30	Txk (MGP_CAROLIEiJ_G0027289) #31	Nipal1 (MGP_CAROLIEiJ_G0027288) #32	Cnga1 (MGP_CAROLIEiJ_G0027287) #33	MGP_CAROLIEiJ_G0027285 #26	Zar1 (MGP_CAROLIEiJ_G0027284) #25	Nfxl1 (MGP_CAROLIEiJ_G0027283) #34	Corin (MGP_CAROLIEiJ_G0027282) #35	MGP_CAROLIEiJ_G0008954 #36	Commd8 (MGP_CAROLIEiJ_G0027281) #37	Gabrb1 (MGP_CAROLIEiJ_G0027280)
Shrew mouse	MODERN SPECIES	4	Kdr (MGP_PahariEiJ_G0017091) #7	Kit (MGP_PahariEiJ_G0017090) #8	Pdgfra (MGP_PahariEiJ_G0017089) #9	Gsx2 (MGP_PahariEiJ_G0017088) #10	Chic2 (MGP_PahariEiJ_G0017087) #11	Lnx1 (MGP_PahariEiJ_G0017086) #12	Fip1l1 (MGP_PahariEiJ_G0017085) #13	Scfd2 (MGP_PahariEiJ_G0017084) #14	Rasl11b (MGP_PahariEiJ_G0017083) #15	Usp46 (MGP_PahariEiJ_G0017082) #16	Spata18 (MGP_PahariEiJ_G0017081) #17	Sgcb (MGP_PahariEiJ_G0017080) #18	MGP_PahariEiJ_G0017079 #19	Dcun1d4 (MGP_PahariEiJ_G0017078) #20	Cwh43 (MGP_PahariEiJ_G0017077) #21	Ociad2 (MGP_PahariEiJ_G0017076) #22	Ociad1 (MGP_PahariEiJ_G0017075) #23	Fryl (MGP_PahariEiJ_G0017074) #24	Zar1 (MGP_PahariEiJ_G0017073) #25	Slc10a4-ps (MGP_PahariEiJ_G0017072) #26	Slc10a4 (MGP_PahariEiJ_G0017071) #26	Gm10135 (MGP_PahariEiJ_G0017070) #28	Slain2 (MGP_PahariEiJ_G0017069) #29	Tec (MGP_PahariEiJ_G0017068) #30	Txk (MGP_PahariEiJ_G0017067) #31	Nipal1 (MGP_PahariEiJ_G0017066) #32	Cnga1 (MGP_PahariEiJ_G0017065) #33	Nfxl1 (MGP_PahariEiJ_G0017064) #34	Corin (MGP_PahariEiJ_G0017063) #35	MGP_PahariEiJ_G0008413 #36	Commd8 (MGP_PahariEiJ_G0017062) #37
Rat	MODERN SPECIES	5	ENSRNOG00000063288	Pdgfra (ENSRNOG00000002244) #9	Gsx2 (ENSRNOG00000002266) #10	Chic2 (ENSRNOG00000002267) #11	Lnx1 (ENSRNOG00000002272) #12	Fip1l1 (ENSRNOG00000002275) #13	Scfd2 (ENSRNOG00000026828) #14	Rasl11b (ENSRNOG00000002097) #15	Usp46 (ENSRNOG00000002106) #16	LOC100363494 (ENSRNOG00000068757)	Spata18 (ENSRNOG00000002120) #17	Sgcb (ENSRNOG00000002135) #18	Lrrc66 (ENSRNOG00000026585)	Dcun1d4 (ENSRNOG00000002152) #20	Cwh43 (ENSRNOG00000002174) #21	Ociad2 (ENSRNOG00000002196) #22	Ociad1 (ENSRNOG00000002205) #23	Fryl (ENSRNOG00000002248) #24	Zar1 (ENSRNOG00000026150) #25	Slc10a4 (ENSRNOG00000026091) #26	Slain2 (ENSRNOG00000002271) #29	Gm10135 (ENSRNOG00000064628) #28	Tec (ENSRNOG00000002278) #30	Txk (ENSRNOG00000025925) #31	Nipal1 (ENSRNOG00000025882) #32	Cnga1 (ENSRNOG00000004778) #33	Nfxl1 (ENSRNOG00000058588) #34	Corin (ENSRNOG00000002302) #35	ENSRNOG00000069538	Atp10d (ENSRNOG00000002312) #36	Commd8 (ENSRNOG00000002320) #37