Gnathostomata	ANCESTRAL SPECIES	3	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00940000161006	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000155951.a ##28	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37	ENSGT00940000157266
Euteleostomi	ANCESTRAL SPECIES		ENSGT00390000002395	ENSGT00940000161261	ENSGT00940000163955	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00940000161006	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000155951.a ##28	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B
Sarcopterygii	ANCESTRAL SPECIES	2	ENSGT00940000179958	ENSGT00940000156021 #9	ENSGT00940000163955	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000154713.B
Tetrapoda	ANCESTRAL SPECIES	3	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000154713.B
Amniota	ANCESTRAL SPECIES	2	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Mammalia	ANCESTRAL SPECIES	1	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00390000018141	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34
Theria	ANCESTRAL SPECIES	6	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Camelidae	ANCESTRAL SPECIES	22	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	11	KDR (ENSCDRG00005002066) #7	KIT (ENSCDRG00005002100) #8	PDGFRA (ENSCDRG00005002143) #9	ENSCDRG00005002178 #10	CHIC2 (ENSCDRG00005002192) #11	LNX1 (ENSCDRG00005002225) #12	ENSCDRG00005002298 #13	SCFD2 (ENSCDRG00005002450) #14	RASL11B (ENSCDRG00005002505) #15	USP46 (ENSCDRG00005002550) #16	SPATA18 (ENSCDRG00005002631) #17	SGCB (ENSCDRG00005002679) #18	LRRC66 (ENSCDRG00005002703) #19	DCUN1D4 (ENSCDRG00005002732) #20	CWH43 (ENSCDRG00005002773) #21	OCIAD2 (ENSCDRG00005002794) #22	OCIAD1 (ENSCDRG00005002829) #23	FRYL (ENSCDRG00005002927) #24	ZAR1 (ENSCDRG00005002960) #25	SLC10A4 (ENSCDRG00005003027) #26	SLAIN2 (ENSCDRG00005003049) #27	TEC (ENSCDRG00005003076) #28	TXK (ENSCDRG00005003102) #29	NIPAL1 (ENSCDRG00005003127) #30	CNGA1 (ENSCDRG00005003141) #31	NFXL1 (ENSCDRG00005003159) #32	CORIN (ENSCDRG00005003215) #33	ATP10D (ENSCDRG00005003361) #34	COMMD8 (ENSCDRG00005003397) #35	GABRB1 (ENSCDRG00005003421) #36	GABRA4 (ENSCDRG00005003459) #37
Arabian camel	MODERN SPECIES		NDUFB4 (ENSCDRG00005010214)	HGD (ENSCDRG00005010063)	RABL3 (ENSCDRG00005009963)	GTF2E1 (ENSCDRG00005009907)	STXBP5L (ENSCDRG00005009380)	POLQ (ENSCDRG00005009042)	FBXO40 (ENSCDRG00005008889)	HCLS1 (ENSCDRG00005008645)	GOLGB1 (ENSCDRG00005008124)	IQCB1 (ENSCDRG00005008000)	EAF2 (ENSCDRG00005007901)	SLC15A2 (ENSCDRG00005007797)	ILDR1 (ENSCDRG00005007584)	CD86 (ENSCDRG00005007380)	CASR (ENSCDRG00005007236)	ENSCDRG00005007199 ##23	CSTA (ENSCDRG00005007175)	MIX23 (ENSCDRG00005007105)	FAM162A (ENSCDRG00005007051)	WDR5B (ENSCDRG00005007033)	KPNA1 (ENSCDRG00005006961)	PARP9 (ENSCDRG00005006932)	DTX3L (ENSCDRG00005006821)	PARP14 (ENSCDRG00005006749)	HSPBAP1 (ENSCDRG00005006680)	SLC49A4 (ENSCDRG00005006626)	SEMA5B (ENSCDRG00005006541)	PDIA5 (ENSCDRG00005006477)	SEC22A (ENSCDRG00005006400)	ADCY5 (ENSCDRG00005006267)	HACD2 (ENSCDRG00005006227)
Alpaca	MODERN SPECIES	4778															CWH43 (ENSVPAG00000011766) #21	OCIAD2 (ENSVPAG00000011765) #22	OCIAD1 (ENSVPAG00000011764) #23
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Cetacea	ANCESTRAL SPECIES	12	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Odontoceti_a	ANCESTRAL SPECIES	23	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Dolphin	MODERN SPECIES	3907																OCIAD2 (ENSTTRG00000000996) #22	OCIAD1 (ENSTTRG00000000995) #23	FRYL (ENSTTRG00000000992) #24
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Beluga whale	MODERN SPECIES	77	KIT (ENSDLEG00000014712) #8	PDGFRA (ENSDLEG00000014750) #9	GSX2 (ENSDLEG00000014788) #10	CHIC2 (ENSDLEG00000014791) #11	LNX1 (ENSDLEG00000014802) #12	FIP1L1 (ENSDLEG00000014828)	SCFD2 (ENSDLEG00000014865) #14	RASL11B (ENSDLEG00000014914) #15	USP46 (ENSDLEG00000014941) #16	ENSDLEG00000014974	ENSDLEG00000014987 #17	ENSDLEG00000015009 #17	SGCB (ENSDLEG00000015019) #18	LRRC66 (ENSDLEG00000015035) #19	DCUN1D4 (ENSDLEG00000007941) #20	OCIAD2 (ENSDLEG00000007977) #22	ENSDLEG00000007996	OCIAD1 (ENSDLEG00000008014) #23	FRYL (ENSDLEG00000008524) #24	ZAR1 (ENSDLEG00000010537) #25	ENSDLEG00000010664 #26	ENSDLEG00000010691 #25	ENSDLEG00000010735 #26	SLAIN2 (ENSDLEG00000010754) #27	TEC (ENSDLEG00000010828) #28	TXK (ENSDLEG00000011189) #29	NIPAL1 (ENSDLEG00000011296) #30	CNGA1 (ENSDLEG00000011319) #31	ENSDLEG00000011336 #32	ENSDLEG00000011368 #32	CORIN (ENSDLEG00000011445) #33
Narwhal	MODERN SPECIES	307	KIT (ENSMMNG00015013144) #8	PDGFRA (ENSMMNG00015013167) #9	GSX2 (ENSMMNG00015013194) #10	CHIC2 (ENSMMNG00015013218) #11	LNX1 (ENSMMNG00015013246) #12	ENSMMNG00015013310	SCFD2 (ENSMMNG00015013410) #14	RASL11B (ENSMMNG00015013438) #15	USP46 (ENSMMNG00015013470) #16	ENSMMNG00015013502	SPATA18 (ENSMMNG00015013524) #17	SGCB (ENSMMNG00015013564) #18	LRRC66 (ENSMMNG00015013581) #19	DCUN1D4 (ENSMMNG00015013609) #20	CWH43 (ENSMMNG00015013652) #21	OCIAD2 (ENSMMNG00015013680) #22	OCIAD1 (ENSMMNG00015013714) #23	FRYL (ENSMMNG00015013775) #24	ZAR1 (ENSMMNG00015013863) #25	SLC10A4 (ENSMMNG00015013870) #26	SLAIN2 (ENSMMNG00015013900) #27	TEC (ENSMMNG00015013940) #28	TXK (ENSMMNG00015013969) #29	NIPAL1 (ENSMMNG00015014041) #30	CNGA1 (ENSMMNG00015014058) #31	NFXL1 (ENSMMNG00015014090) #32	CORIN (ENSMMNG00015014182) #33	ATP10D (ENSMMNG00015014324) #34	COMMD8 (ENSMMNG00015014353) #35	GABRB1 (ENSMMNG00015005558) #36	GABRA4 (ENSMMNG00015005596) #37
Vaquita	MODERN SPECIES	16	KDR (ENSPSNG00000000325) #7	KIT (ENSPSNG00000000276) #8	PDGFRA (ENSPSNG00000000217) #9	GSX2 (ENSPSNG00000000136) #10	CHIC2 (ENSPSNG00000000109) #11	LNX1 (ENSPSNG00000005217) #12	FIP1L1 (ENSPSNG00000005133)	SCFD2 (ENSPSNG00000005058) #14	RASL11B (ENSPSNG00000005019) #15	USP46 (ENSPSNG00000004926) #16	SPATA18 (ENSPSNG00000004807) #17	SGCB (ENSPSNG00000004745) #18	LRRC66 (ENSPSNG00000004722) #19	DCUN1D4 (ENSPSNG00000004664) #20	CWH43 (ENSPSNG00000004578) #21	OCIAD2 (ENSPSNG00000004549) #22	OCIAD1 (ENSPSNG00000004449) #23	FRYL (ENSPSNG00000004311) #24	ZAR1 (ENSPSNG00000004263) #25	SLC10A4 (ENSPSNG00000004242) #26	SLAIN2 (ENSPSNG00000004185) #27	TEC (ENSPSNG00000004114) #28	TXK (ENSPSNG00000004095) #29	NIPAL1 (ENSPSNG00000004075) #30	CNGA1 (ENSPSNG00000004009) #31	NFXL1 (ENSPSNG00000003970) #32	CORIN (ENSPSNG00000003743) #33	ATP10D (ENSPSNG00000003634) #34	COMMD8 (ENSPSNG00000003600) #35	GABRB1 (ENSPSNG00000003559) #36	GABRA4 (ENSPSNG00000003529) #37
Sperm whale	MODERN SPECIES	18	ENSPCTG00005005580	PDGFRA (ENSPCTG00005005611) #9	GSX2 (ENSPCTG00005005685) #10	CHIC2 (ENSPCTG00005005704) #11	LNX1 (ENSPCTG00005005759) #12	FIP1L1 (ENSPCTG00005005849)	SCFD2 (ENSPCTG00005005926) #14	RASL11B (ENSPCTG00005006028) #15	USP46 (ENSPCTG00005006091) #16	SPATA18 (ENSPCTG00005006266) #17	SGCB (ENSPCTG00005006339) #18	LRRC66 (ENSPCTG00005006377) #19	DCUN1D4 (ENSPCTG00005006440) #20	ENSPCTG00005006507	CWH43 (ENSPCTG00005006527) #21	OCIAD2 (ENSPCTG00005006614) #22	OCIAD1 (ENSPCTG00005006672) #23	FRYL (ENSPCTG00005006911) #24	ZAR1 (ENSPCTG00005007796) #25	SLC10A4 (ENSPCTG00005007820) #26	SLAIN2 (ENSPCTG00005007837) #27	TEC (ENSPCTG00005007901) #28	TXK (ENSPCTG00005007927) #29	NIPAL1 (ENSPCTG00005008004) #30	CNGA1 (ENSPCTG00005008032) #31	NFXL1 (ENSPCTG00005008066) #32	CORIN (ENSPCTG00005008164) #33	ENSPCTG00005000323	ATP10D (ENSPCTG00005000367) #34	COMMD8 (ENSPCTG00005000436) #35	GABRB1 (ENSPCTG00005000470) #36
Blue whale	MODERN SPECIES	16	KDR (ENSBMSG00010001647) #7	KIT (ENSBMSG00010001699) #8	PDGFRA (ENSBMSG00010001797) #9	GSX2 (ENSBMSG00010001890) #10	CHIC2 (ENSBMSG00010001906) #11	LNX1 (ENSBMSG00010001954) #12	FIP1L1 (ENSBMSG00010002026)	SCFD2 (ENSBMSG00010002107) #14	RASL11B (ENSBMSG00010002125) #15	ENSBMSG00010002177 #16	SPATA18 (ENSBMSG00010002257) #17	SGCB (ENSBMSG00010002296) #18	LRRC66 (ENSBMSG00010002339) #19	DCUN1D4 (ENSBMSG00010002390) #20	CWH43 (ENSBMSG00010002456) #21	OCIAD2 (ENSBMSG00010002503) #22	ENSBMSG00010002543 #23	FRYL (ENSBMSG00010002631) #24	ZAR1 (ENSBMSG00010002777) #25	SLC10A4 (ENSBMSG00010002788) #26	SLAIN2 (ENSBMSG00010002807) #27	TEC (ENSBMSG00010002868) #28	ENSBMSG00010002879	TXK (ENSBMSG00010002895) #29	NIPAL1 (ENSBMSG00010002941) #30	CNGA1 (ENSBMSG00010003040) #31	NFXL1 (ENSBMSG00010003069) #32	CORIN (ENSBMSG00010003199) #33	ATP10D (ENSBMSG00010003602) #34	COMMD8 (ENSBMSG00010003628) #35	GABRB1 (ENSBMSG00010003647) #36
Pecora	ANCESTRAL SPECIES	15	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481.n.a.a.b.b	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.a #35	ENSGT00940000154245.B #36
Percora_a	ANCESTRAL SPECIES	18	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481.n.a.a.b.b	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.a #35	ENSGT00940000154245.B #36
Bovidae	ANCESTRAL SPECIES	18	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481.n.a.a.b.b	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.a #35	ENSGT00940000154245.B #36
Caprinae	ANCESTRAL SPECIES	13	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00910000147676	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.a #35	ENSGT00940000166149	ENSGT00940000154245.B #36
Rambouillet Sheep	MODERN SPECIES	22	KDR (ENSOARG00020015634) #7	KIT (ENSOARG00020015287) #8	ENSOARG00020015240	PDGFRA (ENSOARG00020015079) #9	ENSOARG00020015027	GSX2 (ENSOARG00020014973) #10	CHIC2 (ENSOARG00020014893) #11	LNX1 (ENSOARG00020014691) #12	SCFD2 (ENSOARG00020013824) #14	USP46 (ENSOARG00020013318) #16	ENSOARG00020013200	SPATA18 (ENSOARG00020013016) #17	SGCB (ENSOARG00020012938) #18	LRRC66 (ENSOARG00020012901) #19	DCUN1D4 (ENSOARG00020012554) #20	OCIAD2 (ENSOARG00020012338) #22	OCIAD1 (ENSOARG00020012036) #23	FRYL (ENSOARG00020010236) #24	ZAR1 (ENSOARG00020009774) #25	SLC10A4 (ENSOARG00020009737) #26	SLAIN2 (ENSOARG00020009674) #27	TEC (ENSOARG00020009559) #28	NIPAL1 (ENSOARG00020009494) #30	TXK (ENSOARG00020009330) #29	CNGA1 (ENSOARG00020009242) #31	NFXL1 (ENSOARG00020009047) #32	CORIN (ENSOARG00020008572) #33	ATP10D (ENSOARG00020008176) #34	ENSOARG00020008085 #35	ENSOARG00020008049	GABRB1 (ENSOARG00020007788) #36
Goat	MODERN SPECIES	25	PDGFRA (ENSCHIG00000005194) #9	GSX2 (ENSCHIG00000017735) #10	CHIC2 (ENSCHIG00000002107) #11	LNX1 (ENSCHIG00000017890) #12	ENSCHIG00000025903	SCFD2 (ENSCHIG00000015721) #14	RASL11B (ENSCHIG00000024365) #15	USP46 (ENSCHIG00000019211) #16	ENSCHIG00000025743	ENSCHIG00000015328	ENSCHIG00000008028	SPATA18 (ENSCHIG00000019427) #17	SGCB (ENSCHIG00000025818) #18	DCUN1D4 (ENSCHIG00000024006) #20	CWH43 (ENSCHIG00000011196) #21	OCIAD2 (ENSCHIG00000016581) #22	OCIAD1 (ENSCHIG00000024339) #23	FRYL (ENSCHIG00000012165) #24	ZAR1 (ENSCHIG00000018543) #25	SLC10A4 (ENSCHIG00000025771) #26	SLAIN2 (ENSCHIG00000013405) #27	TEC (ENSCHIG00000022693) #28	TXK (ENSCHIG00000013279) #29	NIPAL1 (ENSCHIG00000022683) #30	CNGA1 (ENSCHIG00000013825) #31	NFXL1 (ENSCHIG00000021507) #32	CORIN (ENSCHIG00000007759) #33	ATP10D (ENSCHIG00000017299) #34	ENSCHIG00000026952 #35	ENSCHIG00000014623	ENSCHIG00000019267 ##36
Bovinae	ANCESTRAL SPECIES	15	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481.n.a.a.b.b	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.a #35	ENSGT00940000154245.B #36
Bos	ANCESTRAL SPECIES	15	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481.n.a.a.b.b.b.b.a.a.b.a.b	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.a #35	ENSGT00940000154245.B #36
Bos_a	ANCESTRAL SPECIES	21	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00960000190735	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481.n.a.a.b.b.b.b.a.a.b.a.b	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.a #35	ENSGT00940000154245.B #36
Wild yak	MODERN SPECIES	918														DCUN1D4 (ENSBMUG00000011888) #20	CWH43 (ENSBMUG00000011808) #21	OCIAD2 (ENSBMUG00000011788) #22	OCIAD1 (ENSBMUG00000011754) #23	FRYL (ENSBMUG00000011661) #24	ENSBMUG00000011565 #25	SLC10A4 (ENSBMUG00000011550) #26	SLAIN2 (ENSBMUG00000011532) #27	ENSBMUG00000011492 #28
Domestic yak	MODERN SPECIES	25	PDGFRA (ENSBGRG00000024258) #9	GSX2 (ENSBGRG00000024694) #10	CHIC2 (ENSBGRG00000024725) #11	LNX1 (ENSBGRG00000024797) #12	ENSBGRG00000024926	SCFD2 (ENSBGRG00000025260) #14	RASL11B (ENSBGRG00000025282) #15	USP46 (ENSBGRG00000025311) #16	ENSBGRG00000025365	SPATA18 (ENSBGRG00000000356) #17	SGCB (ENSBGRG00000000392) #18	LRRC66 (ENSBGRG00000000416) #19	ENSBGRG00000000436	ENSBGRG00000000459 #20	CWH43 (ENSBGRG00000000567) #21	OCIAD2 (ENSBGRG00000000633) #22	OCIAD1 (ENSBGRG00000000676) #23	ENSBGRG00000000739	FRYL (ENSBGRG00000000771) #24	ZAR1 (ENSBGRG00000000826) #25	SLC10A4 (ENSBGRG00000000935) #26	SLAIN2 (ENSBGRG00000000952) #27	TEC (ENSBGRG00000000984) #28	ENSBGRG00000001028	TXK (ENSBGRG00000001037) #29	NIPAL1 (ENSBGRG00000001082) #30	CNGA1 (ENSBGRG00000001119) #31	NFXL1 (ENSBGRG00000001143) #32	ENSBGRG00000001248	CORIN (ENSBGRG00000001280) #33	ATP10D (ENSBGRG00000001458) #34
Bos_b	ANCESTRAL SPECIES	14	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00940000154598.ac.b	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.a #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Cow	MODERN SPECIES	25	KIT (ENSBTAG00000002699) #8	PDGFRA (ENSBTAG00000007173) #9	GSX2 (ENSBTAG00000045812) #10	CHIC2 (ENSBTAG00000032660) #11	LNX1 (ENSBTAG00000020658) #12	FIP1L1 (ENSBTAG00000020653)	SCFD2 (ENSBTAG00000020648) #14	RASL11B (ENSBTAG00000020647) #15	USP46 (ENSBTAG00000003443) #16	ENSBTAG00000051171	SPATA18 (ENSBTAG00000018106) #17	SGCB (ENSBTAG00000014601) #18	LRRC66 (ENSBTAG00000014599) #19	DCUN1D4 (ENSBTAG00000001600) #20	CWH43 (ENSBTAG00000021347) #21	OCIAD2 (ENSBTAG00000001839) #22	OCIAD1 (ENSBTAG00000010611) #23	FRYL (ENSBTAG00000000137) #24	ZAR1 (ENSBTAG00000004886) #25	SLC10A4 (ENSBTAG00000004888) #26	SLAIN2 (ENSBTAG00000021963) #27	ENSBTAG00000051457 #28	TEC (ENSBTAG00000005062) #28	TXK (ENSBTAG00000005055) #29	NIPAL1 (ENSBTAG00000009423) #30	CNGA1 (ENSBTAG00000002205) #31	NFXL1 (ENSBTAG00000002201) #32	ENSBTAG00000053278	CORIN (ENSBTAG00000002199) #33	ATP10D (ENSBTAG00000000473) #34	COMMD8 (ENSBTAG00000001348) #35
Hybrid Bos Indicus	MODERN SPECIES	25	LNX1 (ENSBIXG00005009701) #12	ENSBIXG00005009810	ENSBIXG00005009835	SCFD2 (ENSBIXG00005000644) #14	RASL11B (ENSBIXG00005000664) #15	ENSBIXG00005009892	ENSBIXG00005009914	USP46 (ENSBIXG00005009949) #16	ENSBIXG00005000725	SPATA18 (ENSBIXG00005010019) #17	SGCB (ENSBIXG00005010046) #18	LRRC66 (ENSBIXG00005010057) #19	ENSBIXG00005010068	DCUN1D4 (ENSBIXG00005010120) #20	CWH43 (ENSBIXG00005010255) #21	OCIAD2 (ENSBIXG00005010308) #22	OCIAD1 (ENSBIXG00005010441) #23	ENSBIXG00005010496	FRYL (ENSBIXG00005000929) #24	ZAR1 (ENSBIXG00005010742) #25	SLC10A4 (ENSBIXG00005010767) #26	SLAIN2 (ENSBIXG00005010802) #27	TEC (ENSBIXG00005010856) #28	TXK (ENSBIXG00005010905) #29	NIPAL1 (ENSBIXG00005005914) #30	CNGA1 (ENSBIXG00005000558) #31	NFXL1 (ENSBIXG00005010994) #32	ENSBIXG00005000993	ENSBIXG00005011024	CORIN (ENSBIXG00005011067) #33	ENSBIXG00005011101
American bison	MODERN SPECIES	3311														DCUN1D4 (ENSBBBG00000018193) #20	CWH43 (ENSBBBG00000018248) #21	OCIAD2 (ENSBBBG00000018293) #22	ENSBBBG00000018417 #23	FRYL (ENSBBBG00000004575) #24	ENSBBBG00000018563 #25	SLC10A4 (ENSBBBG00000008458) #26	SLAIN2 (ENSBBBG00000018594) #27	TEC (ENSBBBG00000018619) #28	TXK (ENSBBBG00000018635) #29	NIPAL1 (ENSBBBG00000018650) #30	CNGA1 (ENSBBBG00000018689) #31	NFXL1 (ENSBBBG00000018752) #32	ENSBBBG00000008354	ENSBBBG00000004703	CORIN (ENSBBBG00000018963) #33	ATP10D (ENSBBBG00000019001) #34	COMMD8 (ENSBBBG00000019012) #35
Siberian musk deer	MODERN SPECIES	1266	PDGFRA (ENSMMSG00000021277) #9	ENSMMSG00000021324	GSX2 (ENSMMSG00000021348) #10	CHIC2 (ENSMMSG00000021379) #11	ENSMMSG00000021416	LNX1 (ENSMMSG00000021431) #12	ENSMMSG00000021486	SCFD2 (ENSMMSG00000021640) #14	RASL11B (ENSMMSG00000021670) #15	USP46 (ENSMMSG00000021696) #16	SPATA18 (ENSMMSG00000021782) #17	SGCB (ENSMMSG00000021920) #18	LRRC66 (ENSMMSG00000021932) #19	ENSMMSG00000021970 #20	CWH43 (ENSMMSG00000022043) #21	OCIAD2 (ENSMMSG00000022117) #22	ENSMMSG00000022145 #23	FRYL (ENSMMSG00000022278) #24	ZAR1 (ENSMMSG00000022742) #25	SLC10A4 (ENSMMSG00000022798) #26	SLAIN2 (ENSMMSG00000022812) #27	TEC (ENSMMSG00000022841) #28	TXK (ENSMMSG00000022866) #29	NIPAL1 (ENSMMSG00000022887) #30	CNGA1 (ENSMMSG00000022893) #31	NFXL1 (ENSMMSG00000022906) #32	CORIN (ENSMMSG00000022956) #33	ATP10D (ENSMMSG00000023395) #34	ENSMMSG00000023418 #35	GABRB1 (ENSMMSG00000023423) #36	GABRA4 (ENSMMSG00000023435) #37
Yarkand deer	MODERN SPECIES	29	KIT (ENSCHYG00000013749) #8	PDGFRA (ENSCHYG00000013443) #9	GSX2 (ENSCHYG00000013391) #10	CHIC2 (ENSCHYG00000013311) #11	LNX1 (ENSCHYG00000013037) #12	ENSCHYG00000012400	SCFD2 (ENSCHYG00000012125) #14	ENSCHYG00000012033 #15	USP46 (ENSCHYG00000011853) #16	SPATA18 (ENSCHYG00000011770) #17	SGCB (ENSCHYG00000011679) #18	LRRC66 (ENSCHYG00000011643) #19	ENSCHYG00000011256 #20	CWH43 (ENSCHYG00000011014) #21	ENSCHYG00000010946	OCIAD2 (ENSCHYG00000010863) #22	ENSCHYG00000010837	ENSCHYG00000010611 #23	FRYL (ENSCHYG00000010372) #24	ZAR1 (ENSCHYG00000010019) #25	SLC10A4 (ENSCHYG00000009927) #26	SLAIN2 (ENSCHYG00000009823) #27	TEC (ENSCHYG00000009525) #28	ENSCHYG00000009480	ENSCHYG00000009456
Suina	ANCESTRAL SPECIES	33	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00730000111450.g.a	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Chacoan peccary	MODERN SPECIES	960	KIT (ENSCWAG00000014775) #8	PDGFRA (ENSCWAG00000014703) #9	GSX2 (ENSCWAG00000014666) #10	CHIC2 (ENSCWAG00000014605) #11	LNX1 (ENSCWAG00000014427) #12	FIP1L1 (ENSCWAG00000013864)	SCFD2 (ENSCWAG00000013750) #14	RASL11B (ENSCWAG00000013658) #15	ENSCWAG00000013604	USP46 (ENSCWAG00000013332) #16	SPATA18 (ENSCWAG00000012879) #17	SGCB (ENSCWAG00000012789) #18	LRRC66 (ENSCWAG00000012693) #19	DCUN1D4 (ENSCWAG00000012514) #20	CWH43 (ENSCWAG00000012257) #21	OCIAD2 (ENSCWAG00000012190) #22	OCIAD1 (ENSCWAG00000011906) #23	FRYL (ENSCWAG00000020707) #24	ZAR1 (ENSCWAG00000020692) #25	SLC10A4 (ENSCWAG00000020687) #26	SLAIN2 (ENSCWAG00000020658) #27	TEC (ENSCWAG00000020639) #28	TXK (ENSCWAG00000020613) #29	NIPAL1 (ENSCWAG00000020601) #30	CNGA1 (ENSCWAG00000020589) #31	ENSCWAG00000020564 #32	ENSCWAG00000020557 #32	CORIN (ENSCWAG00000019920) #33	ENSCWAG00000019843 #34	COMMD8 (ENSCWAG00000019821) #35	GABRB1 (ENSCWAG00000019796) #36
Pig	MODERN SPECIES	16	KIT (ENSSSCG00000008842) #8	PDGFRA (ENSSSCG00000008841) #9	GSX2 (ENSSSCG00000008840) #10	CHIC2 (ENSSSCG00000032645) #11	LNX1 (ENSSSCG00000008838) #12	ENSSSCG00000031636	SCFD2 (ENSSSCG00000008836) #14	RASL11B (ENSSSCG00000008835) #15	ENSSSCG00000021623	USP46 (ENSSSCG00000036284) #16	SPATA18 (ENSSSCG00000008834) #17	SGCB (ENSSSCG00000058015) #18	ENSSSCG00000008832 #19	DCUN1D4 (ENSSSCG00000008831) #20	CWH43 (ENSSSCG00000008830) #21	OCIAD2 (ENSSSCG00000008829) #22	OCIAD1 (ENSSSCG00000058121) #23	FRYL (ENSSSCG00000008826) #24	ZAR1 (ENSSSCG00000008824) #25	SLC10A4 (ENSSSCG00000008823) #26	SLAIN2 (ENSSSCG00000008821) #27	TEC (ENSSSCG00000008820) #28	TXK (ENSSSCG00000008819) #29	NIPAL1 (ENSSSCG00000037950) #30	CNGA1 (ENSSSCG00000038160) #31	NFXL1 (ENSSSCG00000008816) #32	CORIN (ENSSSCG00000008813) #33	ATP10D (ENSSSCG00000008812) #34	COMMD8 (ENSSSCG00000033373) #35	GABRB1 (ENSSSCG00000035621) #36	GABRA4 (ENSSSCG00000030515) #37
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00900000143503
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.d #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Equus	ANCESTRAL SPECIES	12	ENSGT00950000183144.A.i.a.b.f	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00940000154713.B	ENSGT00390000018121.d #35	ENSGT00940000154245.B #36
Horse	MODERN SPECIES	22	ENSECAG00000011833	KIT (ENSECAG00000012032) #8	PDGFRA (ENSECAG00000018176) #9	CHIC2 (ENSECAG00000014019) #11	GSX2 (ENSECAG00000013430) #10	LNX1 (ENSECAG00000017017) #12	FIP1L1 (ENSECAG00000019415)	SCFD2 (ENSECAG00000002235) #14	RASL11B (ENSECAG00000003789) #15	USP46 (ENSECAG00000009006) #16	SPATA18 (ENSECAG00000017782) #17	SGCB (ENSECAG00000020148) #18	LRRC66 (ENSECAG00000022299) #19	DCUN1D4 (ENSECAG00000023996) #20	CWH43 (ENSECAG00000024870) #21	OCIAD2 (ENSECAG00000024972) #22	OCIAD1 (ENSECAG00000024976) #23	FRYL (ENSECAG00000025119) #24	ZAR1 (ENSECAG00000021644) #25	SLC10A4 (ENSECAG00000021654) #26	SLAIN2 (ENSECAG00000023466) #27	TEC (ENSECAG00000024389) #28	TXK (ENSECAG00000057449) #29	NIPAL1 (ENSECAG00000019455) #30	CNGA1 (ENSECAG00000020953) #31	ENSECAG00000020915	NFXL1 (ENSECAG00000022401) #32	CORIN (ENSECAG00000005039) #33	ENSECAG00000037545	ATP10D (ENSECAG00000012518) #34	ENSECAG00000052249
Donkey	MODERN SPECIES	22	KIT (ENSEASG00005019490) #8	ENSEASG00005024773 #9	PDGFRA (ENSEASG00005019499) #9	GSX2 (ENSEASG00005019509) #10	CHIC2 (ENSEASG00005033054) #11	LNX1 (ENSEASG00005019513) #12	ENSEASG00005019566	SCFD2 (ENSEASG00005019936) #14	RASL11B (ENSEASG00005024651) #15	USP46 (ENSEASG00005019951) #16	SPATA18 (ENSEASG00005037001) #17	SGCB (ENSEASG00005004301) #18	LRRC66 (ENSEASG00005004297) #19	DCUN1D4 (ENSEASG00005014327) #20	CWH43 (ENSEASG00005014324) #21	OCIAD2 (ENSEASG00005014323) #22	OCIAD1 (ENSEASG00005014321) #23	FRYL (ENSEASG00005009561) #24	ZAR1 (ENSEASG00005026845) #25	SLC10A4 (ENSEASG00005009010) #26	SLAIN2 (ENSEASG00005009008) #27	TEC (ENSEASG00005008963) #28	TXK (ENSEASG00005008912) #29	NIPAL1 (ENSEASG00005029308) #30	CNGA1 (ENSEASG00005008890) #31	NFXL1 (ENSEASG00005008883) #32	ENSEASG00005038414	CORIN (ENSEASG00005008798) #33	ATP10D (ENSEASG00005008750) #34	ENSEASG00005008742	GABRA4 (ENSEASG00005008735) #37
Chiroptera	ANCESTRAL SPECIES	9	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.d #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Microchiroptera	ANCESTRAL SPECIES	10	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.c #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Greater horseshoe bat	MODERN SPECIES	23	ENSRFEG00010004600	PARD3 (ENSRFEG00010004675)	CUL2 (ENSRFEG00010004807)	CREM (ENSRFEG00010004926)	CCNY (ENSRFEG00010005023)	GJD4 (ENSRFEG00010005039)	FZD8 (ENSRFEG00010005044)	ENSRFEG00010005049	ENSRFEG00010005054 #17	ENSRFEG00010005064 #17	SGCB (ENSRFEG00010005069) #18	LRRC66 (ENSRFEG00010005085) #19	DCUN1D4 (ENSRFEG00010005107) #20	CWH43 (ENSRFEG00010005162) #21	ENSRFEG00010000225	OCIAD2 (ENSRFEG00010000268) #22	OCIAD1 (ENSRFEG00010000361) #23	FRYL (ENSRFEG00010000583) #24	ZAR1 (ENSRFEG00010000867) #25	SLC10A4 (ENSRFEG00010000879) #26	SLAIN2 (ENSRFEG00010000907) #27	TEC (ENSRFEG00010000982) #28	TXK (ENSRFEG00010001040) #29	NIPAL1 (ENSRFEG00010001063) #30	CNGA1 (ENSRFEG00010001086) #31	NFXL1 (ENSRFEG00010001130) #32	CORIN (ENSRFEG00010001293) #33	ATP10D (ENSRFEG00010001499) #34	COMMD8 (ENSRFEG00010001543) #35	GABRB1 (ENSRFEG00010001568) #36	GABRA4 (ENSRFEG00010001585) #37
Microbat	MODERN SPECIES	1286																OCIAD2 (ENSMLUG00000000693) #22	OCIAD1 (ENSMLUG00000000688) #23	FRYL (ENSMLUG00000001543) #24	ENSMLUG00000025711 #25	SLC10A4 (ENSMLUG00000001540) #26	SLAIN2 (ENSMLUG00000001539) #27	TEC (ENSMLUG00000023677) #28	TXK (ENSMLUG00000007688) #29	NIPAL1 (ENSMLUG00000007679) #30	CNGA1 (ENSMLUG00000008401) #31	NFXL1 (ENSMLUG00000008367) #32	CORIN (ENSMLUG00000006709) #33	ATP10D (ENSMLUG00000006681) #34	ENSMLUG00000011376 #35	ENSMLUG00000006663
Megabat	MODERN SPECIES	1129															CWH43 (ENSPVAG00000006050) #21	OCIAD2 (ENSPVAG00000006049) #22
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00900000143503
Felidae	ANCESTRAL SPECIES	4	ENSGT00940000156021 #9	ENSGT00940000154694.i.b	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Panthera	ANCESTRAL SPECIES	5	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000154694.i.b	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00390000017515.o.a	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503
Tiger	MODERN SPECIES	71						LNX1 (ENSPTIG00000009599) #12	FIP1L1 (ENSPTIG00000010757)	SCFD2 (ENSPTIG00000015918) #14	RASL11B (ENSPTIG00000018380) #15	USP46 (ENSPTIG00000018978) #16	SPATA18 (ENSPTIG00000020999) #17	SGCB (ENSPTIG00000006714) #18	LRRC66 (ENSPTIG00000007410) #19	DCUN1D4 (ENSPTIG00000008793) #20	CWH43 (ENSPTIG00000010287) #21	OCIAD2 (ENSPTIG00000011641) #22	OCIAD1 (ENSPTIG00000013386) #23	ENSPTIG00000006593	ENSPTIG00000018205 #24	ENSPTIG00000011485 #24	SLC10A4 (ENSPTIG00000012275) #26	SLAIN2 (ENSPTIG00000013819) #27	TEC (ENSPTIG00000014620) #28	TXK (ENSPTIG00000015124) #29	NIPAL1 (ENSPTIG00000016398) #30	CNGA1 (ENSPTIG00000017279) #31	NFXL1 (ENSPTIG00000019105) #32	CORIN (ENSPTIG00000020309) #33	ATP10D (ENSPTIG00000011079) #34	COMMD8 (ENSPTIG00000014759) #35	ENSPTIG00000007162
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000154694.i.b	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00390000017515.o.a	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503
lion	MODERN SPECIES	4	PDGFRA (ENSPLOG00000003742) #9	GSX2 (ENSPLOG00000003713) #10	CHIC2 (ENSPLOG00000003696) #11	LNX1 (ENSPLOG00000003661) #12	FIP1L1 (ENSPLOG00000003542)	SCFD2 (ENSPLOG00000003440) #14	RASL11B (ENSPLOG00000003416) #15	ENSPLOG00000003341	USP46 (ENSPLOG00000003281) #16	SPATA18 (ENSPLOG00000003154) #17	SGCB (ENSPLOG00000003110) #18	LRRC66 (ENSPLOG00000003082) #19	DCUN1D4 (ENSPLOG00000003028) #20	CWH43 (ENSPLOG00000002953) #21	ENSPLOG00000002924	OCIAD2 (ENSPLOG00000002897) #22	OCIAD1 (ENSPLOG00000002821) #23	ENSPLOG00000002793	FRYL (ENSPLOG00000002649) #24	ZAR1 (ENSPLOG00000002527) #25	SLC10A4 (ENSPLOG00000002516) #26	SLAIN2 (ENSPLOG00000002485) #27	TEC (ENSPLOG00000002458) #28	TXK (ENSPLOG00000002434) #29	NIPAL1 (ENSPLOG00000002420) #30	CNGA1 (ENSPLOG00000002326) #31	NFXL1 (ENSPLOG00000002287) #32	CORIN (ENSPLOG00000002083) #33	ATP10D (ENSPLOG00000001877) #34	COMMD8 (ENSPLOG00000001862) #35	GABRB1 (ENSPLOG00000001840) #36
leopard	MODERN SPECIES	2	PDGFRA (ENSPPRG00000004078) #9	ENSPPRG00000003939	GSX2 (ENSPPRG00000003871) #10	CHIC2 (ENSPPRG00000003452) #11	LNX1 (ENSPPRG00000003037) #12	FIP1L1 (ENSPPRG00000002221)	SCFD2 (ENSPPRG00000000228) #14	RASL11B (ENSPPRG00000023266) #15	USP46 (ENSPPRG00000023778) #16	SPATA18 (ENSPPRG00000024100) #17	SGCB (ENSPPRG00000024271) #18	LRRC66 (ENSPPRG00000024319) #19	DCUN1D4 (ENSPPRG00000024436) #20	CWH43 (ENSPPRG00000024574) #21	ENSPPRG00000024611	OCIAD2 (ENSPPRG00000024648) #22	OCIAD1 (ENSPPRG00000024770) #23	ENSPPRG00000014463	ENSPPRG00000014456	FRYL (ENSPPRG00000024950) #24	ZAR1 (ENSPPRG00000025041) #25	ENSPPRG00000025049 #26	ENSPPRG00000021184 #26	SLAIN2 (ENSPPRG00000020572) #27	TEC (ENSPPRG00000019278) #28	TXK (ENSPPRG00000018223) #29	NIPAL1 (ENSPPRG00000016505) #30	CNGA1 (ENSPPRG00000015670) #31	NFXL1 (ENSPPRG00000014939) #32	CORIN (ENSPPRG00000014127) #33	ATP10D (ENSPPRG00000011749) #34
Cat	MODERN SPECIES	235	PDGFRA (ENSFCAG00000009141) #9	ENSFCAG00000024388	GSX2 (ENSFCAG00000025271) #10	CHIC2 (ENSFCAG00000045270) #11	LNX1 (ENSFCAG00000007897) #12	FIP1L1 (ENSFCAG00000022148)	SCFD2 (ENSFCAG00000007895) #14	RASL11B (ENSFCAG00000045595) #15	ERVMER34-1 (ENSFCAG00000042785)	USP46 (ENSFCAG00000014294) #16	SPATA18 (ENSFCAG00000006689) #17	SGCB (ENSFCAG00000027835) #18	ENSFCAG00000042278 #19	DCUN1D4 (ENSFCAG00000023410) #20	CWH43 (ENSFCAG00000003695) #21	OCIAD2 (ENSFCAG00000027332) #22	OCIAD1 (ENSFCAG00000023294) #23	FRYL (ENSFCAG00000005489) #24	ZAR1 (ENSFCAG00000025777) #25	SLC10A4 (ENSFCAG00000005486) #26	SLAIN2 (ENSFCAG00000009221) #27	ENSFCAG00000048782	TEC (ENSFCAG00000014348) #28	TXK (ENSFCAG00000014347) #29	NIPAL1 (ENSFCAG00000045081) #30	CNGA1 (ENSFCAG00000009134) #31	NFXL1 (ENSFCAG00000031403) #32	CORIN (ENSFCAG00000006125) #33	ATP10D (ENSFCAG00000006122) #34	COMMD8 (ENSFCAG00000023811) #35	GABRB1 (ENSFCAG00000007122) #36
Caniformia	ANCESTRAL SPECIES	7	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000154245.B #36
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b.o #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Mustelinae	ANCESTRAL SPECIES	63	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b.o #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37	ENSGT00390000012178.h
American mink	MODERN SPECIES	36	KDR (ENSNVIG00000014095) #7	KIT (ENSNVIG00000014054) #8	PDGFRA (ENSNVIG00000014002) #9	GSX2 (ENSNVIG00000013995) #10	CHIC2 (ENSNVIG00000013967) #11	LNX1 (ENSNVIG00000013941) #12	ENSNVIG00000013777	SCFD2 (ENSNVIG00000013759) #14	RASL11B (ENSNVIG00000013741) #15	ENSNVIG00000013705 #16	SPATA18 (ENSNVIG00000013671) #17	SGCB (ENSNVIG00000013663) #18	ENSNVIG00000013642 #19	DCUN1D4 (ENSNVIG00000013585) #20	CWH43 (ENSNVIG00000013526) #21	OCAD2 (ENSNVIG00000013479) #22	ENSNVIG00000013401	FRYL (ENSNVIG00000013110) #24	ENSNVIG00000013101 #25	SLC10A4 (ENSNVIG00000013093) #26	SLAIN2 (ENSNVIG00000013057) #27	TEC (ENSNVIG00000013019) #28	TXK (ENSNVIG00000012997) #29	NIPAL1 (ENSNVIG00000012987) #30	ENSNVIG00000012974	NFXL1 (ENSNVIG00000012898) #32	CORIN (ENSNVIG00000012727) #33	ATP10D (ENSNVIG00000012669) #34	COMD8 (ENSNVIG00000012657) #35	GABRB1 (ENSNVIG00000012646) #36	GBRA4 (ENSNVIG00000012620) #37
Ferret	MODERN SPECIES	271	GSX2 (ENSMPUG00000005814) #10	CHIC2 (ENSMPUG00000005811) #11	LNX1 (ENSMPUG00000005806) #12	ENSMPUG00000005800	ENSMPUG00000005797 #14	ENSMPUG00000005794 #14	RASL11B (ENSMPUG00000005791) #15	ENSMPUG00000005778	ENSMPUG00000005776	USP46 (ENSMPUG00000005768) #16	SPATA18 (ENSMPUG00000005704) #17	SGCB (ENSMPUG00000005697) #18	LRRC66 (ENSMPUG00000005685) #19	DCUN1D4 (ENSMPUG00000005586) #20	CWH43 (ENSMPUG00000005574) #21	OCIAD2 (ENSMPUG00000005561) #22	FRYL (ENSMPUG00000005497) #24	SLC10A4 (ENSMPUG00000005489) #26	SLAIN2 (ENSMPUG00000005403) #27	TEC (ENSMPUG00000005388) #28	TXK (ENSMPUG00000005368) #29	NIPAL1 (ENSMPUG00000005324) #30	CNGA1 (ENSMPUG00000005258) #31	NFXL1 (ENSMPUG00000005201) #32	CORIN (ENSMPUG00000005053) #33	ATP10D (ENSMPUG00000005037) #34	COMMD8 (ENSMPUG00000005033) #35	GABRB1 (ENSMPUG00000005025) #36	GABRA4 (ENSMPUG00000005015) #37	COX7B2 (ENSMPUG00000018810)	ENSMPUG00000005007
Ursidae	ANCESTRAL SPECIES	29	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b.o #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Giant Panda	MODERN SPECIES	2	KIT (ENSAMEG00000018372) #8	PDGFRA (ENSAMEG00000018351) #9	GSX2 (ENSAMEG00000025732) #10	CHIC2 (ENSAMEG00000018348) #11	LNX1 (ENSAMEG00000008041) #12	ENSAMEG00000008072	ENSAMEG00000029850	SCFD2 (ENSAMEG00000008113) #14	RASL11B (ENSAMEG00000008116) #15	ENSAMEG00000008131 #16	SPATA18 (ENSAMEG00000008174) #17	SGCB (ENSAMEG00000008182) #18	ENSAMEG00000026090 #19	DCUN1D4 (ENSAMEG00000008209) #20	CWH43 (ENSAMEG00000008221) #21	OCIAD2 (ENSAMEG00000008236) #22	OCIAD1 (ENSAMEG00000008239) #23	FRYL (ENSAMEG00000002926) #24	ENSAMEG00000025345 #25	SLC10A4 (ENSAMEG00000029016) #26	SLAIN2 (ENSAMEG00000003060) #27	TEC (ENSAMEG00000003081) #28	TXK (ENSAMEG00000003170) #29	NIPAL1 (ENSAMEG00000029604) #30	CNGA1 (ENSAMEG00000003224) #31	NFXL1 (ENSAMEG00000003238) #32	CORIN (ENSAMEG00000003272) #33	ATP10D (ENSAMEG00000003322) #34	COMMD8 (ENSAMEG00000003384) #35	ENSAMEG00000003395	ENSAMEG00000029631 ##36
Ursus	ANCESTRAL SPECIES	51	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b.o #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00390000017515.o.a.m.b.a	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022.g #30	ENSGT00940000160022.h #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
American black bear	MODERN SPECIES	8141																ENSUAMG00000014817 #22	ENSUAMG00000014818	OCIAD1 (ENSUAMG00000014819) #23
Polar bear	MODERN SPECIES	234	SRD5A3 (ENSUMAG00000006102)	KDR (ENSUMAG00000005658) #7	KIT (ENSUMAG00000003838) #8	PDGFRA (ENSUMAG00000003589) #9	CHIC2 (ENSUMAG00000003571) #11	LNX1 (ENSUMAG00000003515) #12	ENSUMAG00000002758	ENSUMAG00000002706 #14	ENSUMAG00000002701 #14	USP46 (ENSUMAG00000002673) #16	SPATA18 (ENSUMAG00000002644) #17	SGCB (ENSUMAG00000002628) #18	ENSUMAG00000002626 #19	DCUN1D4 (ENSUMAG00000002532) #20	CWH43 (ENSUMAG00000002461) #21	OCIAD2 (ENSUMAG00000002455) #22	OCIAD1 (ENSUMAG00000002446) #23	ENSUMAG00000002439	ENSUMAG00000002436	ENSUMAG00000002342 #24	ENSUMAG00000002333 #24	ENSUMAG00000002324 #26	SLAIN2 (ENSUMAG00000002315) #27	TEC (ENSUMAG00000002303) #28	TXK (ENSUMAG00000002289) #29	ENSUMAG00000002272 #30	ENSUMAG00000002266 #30	CNGA1 (ENSUMAG00000002261) #31	NFXL1 (ENSUMAG00000002247) #32	CORIN (ENSUMAG00000002040) #33	ATP10D (ENSUMAG00000001980) #34
Canidae	ANCESTRAL SPECIES	51	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Red fox	MODERN SPECIES	124		ENSVVUG00000024916	ENSVVUG00000024912	PDGFRA (ENSVVUG00000024908) #9	CHIC2 (ENSVVUG00000024905) #11	LNX1 (ENSVVUG00000024901) #12	FIP1L1 (ENSVVUG00000024895)	SCFD2 (ENSVVUG00000024890) #14	RASL11B (ENSVVUG00000024884) #15	USP46 (ENSVVUG00000024880) #16	SPATA18 (ENSVVUG00000024870) #17	SGCB (ENSVVUG00000024865) #18	ENSVVUG00000024862 #19	DCUN1D4 (ENSVVUG00000024860) #20	CWH43 (ENSVVUG00000024853) #21	OCIAD2 (ENSVVUG00000024852) #22	OCIAD1 (ENSVVUG00000024850) #23	FRYL (ENSVVUG00000023775) #24	ENSVVUG00000023714 #26	ENSVVUG00000023706 #26	SLAIN2 (ENSVVUG00000023701) #27	TEC (ENSVVUG00000023694) #28	TXK (ENSVVUG00000023685) #29	NIPAL1 (ENSVVUG00000023672) #30	CNGA1 (ENSVVUG00000023669) #31	ENSVVUG00000023660 #32	ENSVVUG00000023657 #32	CORIN (ENSVVUG00000023644) #33	ATP10D (ENSVVUG00000023637) #34	COMMD8 (ENSVVUG00000023634) #35	ENSVVUG00000023173
Canis_lupus	ANCESTRAL SPECIES	19	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Dog	MODERN SPECIES	4	KDR (ENSCAFG00845012083) #7	KIT (ENSCAFG00845011904) #8	PDGFRA (ENSCAFG00845011775) #9	GSX2 (ENSCAFG00845011743) #10	CHIC2 (ENSCAFG00845011712) #11	LNX1 (ENSCAFG00845011670) #12	FIP1L1 (ENSCAFG00845011572)	SCFD2 (ENSCAFG00845011397) #14	RASL11B (ENSCAFG00845011251) #15	USP46 (ENSCAFG00845011008) #16	SPATA18 (ENSCAFG00845010886) #17	SGCB (ENSCAFG00845010845) #18	ENSCAFG00845010819 #19	DCUN1D4 (ENSCAFG00845010697) #20	CWH43 (ENSCAFG00845010559) #21	OCIAD2 (ENSCAFG00845010489) #22	OCIAD1 (ENSCAFG00845010354) #23	FRYL (ENSCAFG00845010043) #24	ENSCAFG00845009950 #25	SLC10A4 (ENSCAFG00845009926) #26	SLAIN2 (ENSCAFG00845009861) #27	TEC (ENSCAFG00845009779) #28	TXK (ENSCAFG00845009720) #29	NIPAL1 (ENSCAFG00845009684) #30	CNGA1 (ENSCAFG00845009629) #31	NFXL1 (ENSCAFG00845009403) #32	CORIN (ENSCAFG00845009036) #33	ATP10D (ENSCAFG00845008717) #34	COMMD8 (ENSCAFG00845008641) #35	ENSCAFG00845008573	GABRA4 (ENSCAFG00845008486) #37
Dingo	MODERN SPECIES	2	SRD5A3 (ENSCAFG00020000287)	KDR (ENSCAFG00020000430) #7	KIT (ENSCAFG00020001613) #8	PDGFRA (ENSCAFG00020001700) #9	GSX2 (ENSCAFG00020001709) #10	CHIC2 (ENSCAFG00020001719) #11	LNX1 (ENSCAFG00020001736) #12	ENSCAFG00020001745	SCFD2 (ENSCAFG00020001766) #14	RASL11B (ENSCAFG00020001800) #15	USP46 (ENSCAFG00020001811) #16	SPATA18 (ENSCAFG00020001878) #17	SGCB (ENSCAFG00020001898) #18	DCUN1D4 (ENSCAFG00020001922) #20	CWH43 (ENSCAFG00020001935) #21	OCIAD2 (ENSCAFG00020002015) #22	OCIAD1 (ENSCAFG00020002029) #23	FRYL (ENSCAFG00020002092) #24	ENSCAFG00020002367 #25	SLC10A4 (ENSCAFG00020002371) #26	ENSCAFG00020002381	SLAIN2 (ENSCAFG00020002388) #27	ENSCAFG00020002430 #28	TEC (ENSCAFG00020002435) #28	TXK (ENSCAFG00020002446) #29	NIPAL1 (ENSCAFG00020002496) #30	CNGA1 (ENSCAFG00020002520) #31	ENSCAFG00020002527 #32	ENSCAFG00020002539 #32	CORIN (ENSCAFG00020002573) #33	ATP10D (ENSCAFG00020002831) #34
Eulipotyphla	ANCESTRAL SPECIES	1744																ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23
Hedgehog	MODERN SPECIES	1198																OCIAD2 (ENSEEUG00000006759) #22
Common shrew	MODERN SPECIES	738																OCIAD2 (ENSSARG00000013249) #22	OCIAD1 (ENSSARG00000013243) #23
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00900000143503
Primates	ANCESTRAL SPECIES	10	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00900000143503
Haplorrhini	ANCESTRAL SPECIES	23	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00900000143503
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00900000143503
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00390000013770.d	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Vervet Monkey	MODERN SPECIES	19															CWH43 (ENSCSAG00000017220) #21	OCIAD2 (ENSCSAG00000017211) #22	OCIAD1 (ENSCSAG00000017208) #23	FRYL (ENSCSAG00000017204) #24	ZAR1 (ENSCSAG00000017185) #25	SLC10A4 (ENSCSAG00000017179) #26	SLAIN2 (ENSCSAG00000017177) #27	TEC (ENSCSAG00000017174) #28	TXK (ENSCSAG00000017171) #29	NIPAL1 (ENSCSAG00000017165) #30	CNGA1 (ENSCSAG00000017161) #31	NFXL1 (ENSCSAG00000017157) #32	CORIN (ENSCSAG00000017154) #33	ATP10D (ENSCSAG00000017150) #34	COMMD8 (ENSCSAG00000017147) #35	GABRB1 (ENSCSAG00000017141) #36	GABRA4 (ENSCSAG00000017136) #37
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00910000147676	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Macaca	ANCESTRAL SPECIES	25															ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Pig-tailed macaque	MODERN SPECIES	339															CWH43 (ENSMNEG00000027526) #21	OCIAD2 (ENSMNEG00000012283) #22	OCIAD1 (ENSMNEG00000000100) #23	FRYL (ENSMNEG00000029581) #24	ZAR1 (ENSMNEG00000034020) #25	SLC10A4 (ENSMNEG00000032486) #26
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00940000161474.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00940000157329	ENSGT00940000153771.B	ENSGT00390000004874.a.b	ENSGT00940000154298.a.b.f	ENSGT00940000157350	ENSGT00390000003791.g.b	ENSGT00530000063424.b	ENSGT01030000234574.B.c.a.c	ENSGT00940000160897	ENSGT00940000158223	ENSGT00940000155680.d	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37	ENSGT00940000157266
Crab-eating macaque	MODERN SPECIES	15	ENSMFAG00000057243	COQ2 (ENSMFAG00000033468)	HPSE (ENSMFAG00000030543)	ENSMFAG00000030001	HELQ (ENSMFAG00000040731)	MRPS18C (ENSMFAG00000003991)	ABRAXAS1 (ENSMFAG00000000267)	GPAT3 (ENSMFAG00000056266)	ENSMFAG00000060937	ENSMFAG00000051756	ENSMFAG00000055735	CDS1 (ENSMFAG00000002059)	ENSMFAG00000059818	WDFY3 (ENSMFAG00000036405)	CWH43 (ENSMFAG00000000295) #21	OCIAD2 (ENSMFAG00000000259) #22	OCIAD1 (ENSMFAG00000043928) #23	FRYL (ENSMFAG00000034687) #24	ZAR1 (ENSMFAG00000051405) #25	SLC10A4 (ENSMFAG00000001804) #26	ENSMFAG00000063563	ENSMFAG00000052688	SLAIN2 (ENSMFAG00000042290) #27	ENSMFAG00000024698	NIPAL1 (ENSMFAG00000003735) #30	TEC (ENSMFAG00000001846) #28	CNGA1 (ENSMFAG00000033706) #31	NFXL1 (ENSMFAG00000039913) #32	CORIN (ENSMFAG00000036209) #33	ATP10D (ENSMFAG00000032751) #34	COMMD8 (ENSMFAG00000041161) #35
Rhesus	MODERN SPECIES	15	COPS4 (ENSMMUG00000022312)	PLAC8 (ENSMMUG00000022311)	ENSMMUG00000053321	COQ2 (ENSMMUG00000013340)	HPSE (ENSMMUG00000013342)	ENSMMUG00000003986	HELQ (ENSMMUG00000015350)	MRPS18C (ENSMMUG00000015353)	ABRAXAS1 (ENSMMUG00000030337)	GPAT3 (ENSMMUG00000041217)	NKX6-1 (ENSMMUG00000021161)	CDS1 (ENSMMUG00000021162)	ENSMMUG00000053390	WDFY3 (ENSMMUG00000021164)	CWH43 (ENSMMUG00000014714) #21	OCIAD2 (ENSMMUG00000014869) #22	ENSMMUG00000063785	OCIAD1 (ENSMMUG00000014868) #23	ENSMMUG00000056196	ENSMMUG00000057223	FRYL (ENSMMUG00000006705) #24	ZAR1 (ENSMMUG00000006704) #25	SLC10A4 (ENSMMUG00000006703) #26	ENSMMUG00000052381	SLAIN2 (ENSMMUG00000056052) #27	TEC (ENSMMUG00000018628) #28	NIPAL1 (ENSMMUG00000018625) #30	CNGA1 (ENSMMUG00000005764) #31	NFXL1 (ENSMMUG00000021780) #32	ENSMMUG00000049414	CORIN (ENSMMUG00000021779) #33
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00910000147676	ENSGT00390000003682.ib.a.b.f.a.a.b.a.b.a.a.a.a.a	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155722.m.b.b	ENSGT00940000155951.b #28	ENSGT00390000016988.a.a.a.a.a.a.b	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Cercopithecinae_d	ANCESTRAL SPECIES	171														ENSGT00390000013354.d.a.a.a.b	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155722.m.b.b	ENSGT00940000155951.b #28	ENSGT00390000016988.a.a.a.a.a.a.b	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Drill	MODERN SPECIES	310														ENSMLEG00000028437	CWH43 (ENSMLEG00000029355) #21	OCIAD2 (ENSMLEG00000037116) #22	OCIAD1 (ENSMLEG00000032328) #23	ENSMLEG00000013264 #24
Sooty mangabey	MODERN SPECIES	241														ENSCATG00000031247	CWH43 (ENSCATG00000036392) #21	OCIAD2 (ENSCATG00000016252) #22	OCIAD1 (ENSCATG00000035190) #23	FRYL (ENSCATG00000035924) #24	ZAR1 (ENSCATG00000000461) #25	SLC10A4 (ENSCATG00000036979) #26	ENSCATG00000036193	SLAIN2 (ENSCATG00000032868) #27	TEC (ENSCATG00000008966) #28	ENSCATG00000041789	TXK (ENSCATG00000040104) #29	NIPAL1 (ENSCATG00000038035) #30	CNGA1 (ENSCATG00000007300) #31	NFXL1 (ENSCATG00000032998) #32	CORIN (ENSCATG00000033250) #33	ATP10D (ENSCATG00000035358) #34	COMMD8 (ENSCATG00000032205) #35
Olive baboon	MODERN SPECIES	13	ENSPANG00000047571	SCFD2 (ENSPANG00000017814) #14	RASL11B (ENSPANG00000038411) #15	ENSPANG00000041881	ENSPANG00000042571	ERVMER34-1 (ENSPANG00000039612)	USP46 (ENSPANG00000008485) #16	ENSPANG00000040500	SPATA18 (ENSPANG00000009236) #17	SGCB (ENSPANG00000007510) #18	LRRC66 (ENSPANG00000010298) #19	ENSPANG00000043682	ENSPANG00000000847 #20	ENSPANG00000043512	CWH43 (ENSPANG00000022291) #21	OCIAD2 (ENSPANG00000012558) #22	OCIAD1 (ENSPANG00000000147) #23	ENSPANG00000045840	FRYL (ENSPANG00000018310) #24	ZAR1 (ENSPANG00000018308) #25	SLC10A4 (ENSPANG00000018307) #26	ENSPANG00000030256	SLAIN2 (ENSPANG00000012559) #27	TEC (ENSPANG00000016343) #28	ENSPANG00000036026	TXK (ENSPANG00000021493) #29	NIPAL1 (ENSPANG00000010321) #30	CNGA1 (ENSPANG00000019103) #31	NFXL1 (ENSPANG00000025042) #32	ENSPANG00000045935	CORIN (ENSPANG00000020531) #33
Rhinopithecus	ANCESTRAL SPECIES	685																ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a.i #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26
Black snub-nosed monkey	MODERN SPECIES	609																OCIAD2 (ENSRBIG00000028894) #22	OCIAD1 (ENSRBIG00000034957) #23	FRYL (ENSRBIG00000040346) #24	ZAR1 (ENSRBIG00000033029) #25	SLC10A4 (ENSRBIG00000033513) #26
Golden snub-nosed monkey	MODERN SPECIES	2977																OCIAD2 (ENSRROG00000030073) #22	ENSRROG00000033056 #23
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00390000013770.d	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Hominidae	ANCESTRAL SPECIES	12	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00390000013770.d	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00390000013770.d	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b.m #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Gorilla	MODERN SPECIES	17	UBA6 (ENSGGOG00000014742)	ENSGGOG00000013903	GNRHR (ENSGGOG00000016163)	TMPRSS11D (ENSGGOG00000001235)	TMPRSS11A (ENSGGOG00000012506)	TMPRSS11F (ENSGGOG00000001247)	TMPRSS11B (ENSGGOG00000025912)	YTHDC1 (ENSGGOG00000021958)	TMPRSS11E (ENSGGOG00000022081)	ENSGGOG00000036668	UGT2B15 (ENSGGOG00000026833)	UGT2B10 (ENSGGOG00000001627)	UGT2A3 (ENSGGOG00000009595)	ENSGGOG00000043597	CWH43 (ENSGGOG00000014483) #21	OCIAD2 (ENSGGOG00000013778) #22	OCIAD1 (ENSGGOG00000006669) #23	FRYL (ENSGGOG00000007654) #24	ZAR1 (ENSGGOG00000007649) #25	SLC10A4 (ENSGGOG00000007646) #26	SLAIN2 (ENSGGOG00000012594) #27	TEC (ENSGGOG00000009028) #28	TXK (ENSGGOG00000009011) #29	NIPAL1 (ENSGGOG00000009006) #30	CNGA1 (ENSGGOG00000013840) #31	NFXL1 (ENSGGOG00000008489) #32	CORIN (ENSGGOG00000011143) #33	ATP10D (ENSGGOG00000008736) #34	COMMD8 (ENSGGOG00000024374) #35	ENSGGOG00000040640	GABRB1 (ENSGGOG00000034915) #36
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00390000013770.d	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b.m #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Human	MODERN SPECIES	16	PDGFRA (ENSG00000134853) #9	GSX2 (ENSG00000180613) #10	CHIC2 (ENSG00000109220) #11	LNX1 (ENSG00000072201) #12	ENSG00000282278	FIP1L1 (ENSG00000145216)	SCFD2 (ENSG00000184178) #14	RASL11B (ENSG00000128045) #15	ERVMER34-1 (ENSG00000226887)	USP46 (ENSG00000109189) #16	SPATA18 (ENSG00000163071) #17	SGCB (ENSG00000163069) #18	LRRC66 (ENSG00000188993) #19	DCUN1D4 (ENSG00000109184) #20	CWH43 (ENSG00000109182) #21	OCIAD2 (ENSG00000145247) #22	OCIAD1 (ENSG00000109180) #23	FRYL (ENSG00000075539) #24	ZAR1 (ENSG00000182223) #25	SLC10A4 (ENSG00000145248) #26	SLAIN2 (ENSG00000109171) #27	TEC (ENSG00000135605) #28	TXK (ENSG00000074966) #29	CNGA1 (ENSG00000198515) #31	NIPAL1 (ENSG00000163293) #30	NFXL1 (ENSG00000170448) #32	CORIN (ENSG00000145244) #33	ATP10D (ENSG00000145246) #34	COMMD8 (ENSG00000169019) #35	GABRB1 (ENSG00000163288) #36	GABRA4 (ENSG00000109158) #37
Pan	ANCESTRAL SPECIES	7	ENSGT00940000156043 #10	ENSGT00950000182965.a.b.b.a	ENSGT00390000003601.b #11	ENSGT00390000013770.d	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b.m #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00910000144184.q.b.b.a.a	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36
Chimpanzee	MODERN SPECIES	17	ENSPTRG00000047699	CHIC2 (ENSPTRG00000016064) #11	LNX1 (ENSPTRG00000016062) #12	ENSPTRG00000048363	FIP1L1 (ENSPTRG00000016060)	SCFD2 (ENSPTRG00000016059) #14	RASL11B (ENSPTRG00000016058) #15	ENSPTRG00000046219	ERVMER34-1 (ENSPTRG00000051750)	USP46 (ENSPTRG00000043855) #16	SPATA18 (ENSPTRG00000016054) #17	SGCB (ENSPTRG00000016053) #18	LRRC66 (ENSPTRG00000016052) #19	DCUN1D4 (ENSPTRG00000016051) #20	CWH43 (ENSPTRG00000016049) #21	OCIAD2 (ENSPTRG00000016048) #22	OCIAD1 (ENSPTRG00000016047) #23	FRYL (ENSPTRG00000016045) #24	ZAR1 (ENSPTRG00000016044) #25	SLC10A4 (ENSPTRG00000016043) #26	SLAIN2 (ENSPTRG00000016042) #27	TEC (ENSPTRG00000016041) #28	TXK (ENSPTRG00000016040) #29	NIPAL1 (ENSPTRG00000016038) #30	ENSPTRG00000039556	CNGA1 (ENSPTRG00000016036) #31	NFXL1 (ENSPTRG00000016035) #32	CORIN (ENSPTRG00000016034) #33	ENSPTRG00000052754	ATP10D (ENSPTRG00000016032) #34	COMMD8 (ENSPTRG00000016031) #35
Bonobo	MODERN SPECIES	17	ENSPPAG00000032307	CHIC2 (ENSPPAG00000010433) #11	LNX1 (ENSPPAG00000037579) #12	ENSPPAG00000032520	ENSPPAG00000029594	SCFD2 (ENSPPAG00000001904) #14	RASL11B (ENSPPAG00000031269) #15	ENSPPAG00000025880	ERVMER34-1 (ENSPPAG00000019038)	USP46 (ENSPPAG00000011705) #16	SPATA18 (ENSPPAG00000026258) #17	SGCB (ENSPPAG00000036001) #18	LRRC66 (ENSPPAG00000032413) #19	DCUN1D4 (ENSPPAG00000042595) #20	CWH43 (ENSPPAG00000039872) #21	OCIAD2 (ENSPPAG00000037380) #22	OCIAD1 (ENSPPAG00000043460) #23	FRYL (ENSPPAG00000035404) #24	ENSPPAG00000038037 #25	SLC10A4 (ENSPPAG00000042294) #26	SLAIN2 (ENSPPAG00000043404) #27	TEC (ENSPPAG00000030176) #28	TXK (ENSPPAG00000037522) #29	NIPAL1 (ENSPPAG00000031664) #30	ENSPPAG00000043420	CNGA1 (ENSPPAG00000021167) #31	NFXL1 (ENSPPAG00000043425) #32	CORIN (ENSPPAG00000032757) #33	ENSPPAG00000030943	ATP10D (ENSPPAG00000012322) #34	COMMD8 (ENSPPAG00000033705) #35
Orangutan	MODERN SPECIES	17	ENSPPYG00000037118	ADGRL3 (ENSPPYG00000014740)	TECRL (ENSPPYG00000014738)	ENSPPYG00000012305	EPHA5 (ENSPPYG00000014737)	ENSPPYG00000040221	CENPC (ENSPPYG00000014736)	STAP1 (ENSPPYG00000014735)	UBA6 (ENSPPYG00000014733)	GNRHR (ENSPPYG00000014732)	TMPRSS11D (ENSPPYG00000014731)	TMPRSS11A (ENSPPYG00000014730)	TMPRSS11F (ENSPPYG00000014728)	TMPRSS11B (ENSPPYG00000014727)	CWH43 (ENSPPYG00000014723) #21	OCIAD2 (ENSPPYG00000014722) #22	OCIAD1 (ENSPPYG00000014721) #23	FRYL (ENSPPYG00000014720) #24	ZAR1 (ENSPPYG00000014719) #25	SLC10A4 (ENSPPYG00000014718) #26	SLAIN2 (ENSPPYG00000014717) #27	TEC (ENSPPYG00000014716) #28	TXK (ENSPPYG00000014715) #29	NIPAL1 (ENSPPYG00000014714) #30	CNGA1 (ENSPPYG00000014712) #31	CORIN (ENSPPYG00000029738) #33	ATP10D (ENSPPYG00000014710) #34	COMMD8 (ENSPPYG00000014709) #35	GABRB1 (ENSPPYG00000014708) #36	GABRA4 (ENSPPYG00000014707) #37	COX7B2 (ENSPPYG00000014706)
Gibbon	MODERN SPECIES	12	ENSNLEG00000015978	GPR148 (ENSNLEG00000019096)	ARHGEF4 (ENSNLEG00000010741)	FAM168B (ENSNLEG00000027695)	PLEKHB2 (ENSNLEG00000010698)	PTPN18 (ENSNLEG00000010616)	IMP4 (ENSNLEG00000010574)	ENSNLEG00000010569	ENSNLEG00000010565	ENSNLEG00000026840	ENSNLEG00000030203	ENSNLEG00000010494	ENSNLEG00000010469	CWH43 (ENSNLEG00000017432) #21	ENSNLEG00000030034	OCIAD2 (ENSNLEG00000017430) #22	OCIAD1 (ENSNLEG00000017417) #23	FRYL (ENSNLEG00000017409) #24	ZAR1 (ENSNLEG00000017407) #25	SLC10A4 (ENSNLEG00000017405) #26	SLAIN2 (ENSNLEG00000017399) #27	TEC (ENSNLEG00000017384) #28	TXK (ENSNLEG00000017380) #29	NIPAL1 (ENSNLEG00000017377) #30	CNGA1 (ENSNLEG00000017375) #31	NFXL1 (ENSNLEG00000017372) #32	CORIN (ENSNLEG00000017357) #33	ENSNLEG00000029744	ATP10D (ENSNLEG00000017334) #34	COMMD8 (ENSNLEG00000017332) #35	ENSNLEG00000035223
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000154326.a.a.h.a.a	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b.c #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00950000182926.b.d.c.b.a.b.a	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B
Cebidae	ANCESTRAL SPECIES	4	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000154326.a.a.h.a.a	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00870000136875	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b.c #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00950000182926.b.d.c.b.a.b.a	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B
Cebidae_a	ANCESTRAL SPECIES	63	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000154326.a.a.h.a.a	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b.g #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b.c #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00950000182926.b.d.c.b.a.b.a	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503
Capuchin	MODERN SPECIES	124	CHIC2 (ENSCCAG00000030790) #11	LNX1 (ENSCCAG00000034596) #12	FIP1L1 (ENSCCAG00000021687)	SCFD2 (ENSCCAG00000031373) #14	ENSCCAG00000023197	ENSCCAG00000030526	ENSCCAG00000031404	RASL11B (ENSCCAG00000037560) #15	ENSCCAG00000032234	ENSCCAG00000030356 #16	SPATA18 (ENSCCAG00000020113) #17	SGCB (ENSCCAG00000012614) #18	LRRC66 (ENSCCAG00000037453) #19	DCUN1D4 (ENSCCAG00000016912) #20	CWH43 (ENSCCAG00000020925) #21	OCIAD2 (ENSCCAG00000031065) #22	OCIAD1 (ENSCCAG00000025450) #23	ENSCCAG00000037817	FRYL (ENSCCAG00000034554) #24	ENSCCAG00000034311 #25	SLC10A4 (ENSCCAG00000037459) #26	SLAIN2 (ENSCCAG00000008869) #27	ENSCCAG00000021799	TEC (ENSCCAG00000034761) #28	TXK (ENSCCAG00000017733) #29	NIPAL1 (ENSCCAG00000032859) #30	CNGA1 (ENSCCAG00000027342) #31	NFXL1 (ENSCCAG00000035844) #32	CORIN (ENSCCAG00000036055) #33	ATP10D (ENSCCAG00000032623) #34	COMMD8 (ENSCCAG00000037718) #35
Bolivian squirrel monkey	MODERN SPECIES	99	PDGFRA (ENSSBOG00000022806) #9	GSX2 (ENSSBOG00000035576) #10	CHIC2 (ENSSBOG00000015084) #11	ENSSBOG00000010731	LNX1 (ENSSBOG00000034544) #12	FIP1L1 (ENSSBOG00000033039)	SCFD2 (ENSSBOG00000033762) #14	RASL11B (ENSSBOG00000019612) #15	USP46 (ENSSBOG00000016128) #16	ENSSBOG00000013697	SPATA18 (ENSSBOG00000003084) #17	SGCB (ENSSBOG00000027981) #18	LRRC66 (ENSSBOG00000025555) #19	DCUN1D4 (ENSSBOG00000030384) #20	CWH43 (ENSSBOG00000032930) #21	OCIAD2 (ENSSBOG00000034198) #22	ENSSBOG00000021390 #23	FRYL (ENSSBOG00000028692) #24	ENSSBOG00000023936 #25	SLC10A4 (ENSSBOG00000024711) #26	SLAIN2 (ENSSBOG00000007441) #27	TEC (ENSSBOG00000021227) #28	TXK (ENSSBOG00000029128) #29	NIPAL1 (ENSSBOG00000035037) #30	CNGA1 (ENSSBOG00000031467) #31	NFXL1 (ENSSBOG00000003763) #32	CORIN (ENSSBOG00000016632) #33	ATP10D (ENSSBOG00000023690) #34	COMMD8 (ENSSBOG00000023425) #35	ENSSBOG00000020110	GABRB1 (ENSSBOG00000029924) #36
Marmoset	MODERN SPECIES	15	GSX2 (ENSCJAG00000018454) #10	CHIC2 (ENSCJAG00000041961) #11	ENSCJAG00000083456	ENSCJAG00000082324	LNX1 (ENSCJAG00000018469) #12	FIP1L1 (ENSCJAG00000018490)	SCFD2 (ENSCJAG00000018545) #14	ENSCJAG00000072048 #15	ERVMER34-1 (ENSCJAG00000062102)	USP46 (ENSCJAG00000018556) #16	SPATA18 (ENSCJAG00000018594) #17	SGCB (ENSCJAG00000018579) #18	LRRC66 (ENSCJAG00000018599) #19	DCUN1D4 (ENSCJAG00000018601) #20	CWH43 (ENSCJAG00000018615) #21	OCIAD2 (ENSCJAG00000018637) #22	OCIAD1 (ENSCJAG00000018644) #23	FRYL (ENSCJAG00000018669) #24	ENSCJAG00000085981	ZAR1 (ENSCJAG00000018797) #25	SLC10A4 (ENSCJAG00000018818) #26	SLAIN2 (ENSCJAG00000042883) #27	TEC (ENSCJAG00000018849) #28	ENSCJAG00000071494	TXK (ENSCJAG00000018872) #29	NIPAL1 (ENSCJAG00000060232) #30	CNGA1 (ENSCJAG00000018878) #31	NFXL1 (ENSCJAG00000018893) #32	CORIN (ENSCJAG00000018936) #33	ATP10D (ENSCJAG00000018950) #34	COMMD8 (ENSCJAG00000018967) #35
Mas night monkey	MODERN SPECIES	469	GSX2 (ENSANAG00000019366) #10	CHIC2 (ENSANAG00000028323) #11	ENSANAG00000037095	LNX1 (ENSANAG00000028251) #12	ENSANAG00000032461	SCFD2 (ENSANAG00000037492) #14	ENSANAG00000027223	ENSANAG00000036362	RASL11B (ENSANAG00000030414) #15	USP46 (ENSANAG00000037399) #16	SPATA18 (ENSANAG00000024358) #17	SGCB (ENSANAG00000037522) #18	LRRC66 (ENSANAG00000027871) #19	DCUN1D4 (ENSANAG00000006089) #20	CWH43 (ENSANAG00000036936) #21	OCIAD2 (ENSANAG00000033240) #22	OCIAD1 (ENSANAG00000037176) #23	ENSANAG00000027091	FRYL (ENSANAG00000030260) #24	ZAR1 (ENSANAG00000035179) #25	SLC10A4 (ENSANAG00000029030) #26	SLAIN2 (ENSANAG00000020742) #27	TEC (ENSANAG00000035862) #28	TXK (ENSANAG00000031213) #29	NIPAL1 (ENSANAG00000022393) #30	CNGA1 (ENSANAG00000026609) #31	NFXL1 (ENSANAG00000021407) #32	CORIN (ENSANAG00000024072) #33	ENSANAG00000020160	ATP10D (ENSANAG00000026040) #34	COMMD8 (ENSANAG00000019583) #35
Platyrrhini	ANCESTRAL SPECIES	17	ENSGT00940000157414	ENSGT00940000156907	ENSGT00940000165104	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00950000182808.b.a ##26	ENSGT00940000154634.c.ab	ENSGT00940000162398	ENSGT00940000160340.c	ENSGT00940000161845	ENSGT00940000160445	ENSGT00940000154530.r.b.a.b	ENSGT00390000002061	ENSGT00940000156172.b	ENSGT00530000063690.a.b.a.b.d #22	ENSGT00940000157988	ENSGT00940000155294	ENSGT00390000001057	ENSGT00940000157068	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00390000004451	ENSGT00940000159419	ENSGT00530000064276	ENSGT00390000001846	ENSGT00940000159542	ENSGT00860000136016	ENSGT00940000158224	ENSGT00940000156473	ENSGT00940000158635	ENSGT00940000159124
Cebidae	ANCESTRAL SPECIES	19	ENSGT00940000157414	ENSGT00940000156907	ENSGT00940000165104	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00950000182808.b.a ##26	ENSGT00940000154634.c.ab	ENSGT00940000162398	ENSGT00940000160340.c	ENSGT00940000161845	ENSGT00940000160445	ENSGT00940000154530.r.b.a.b	ENSGT00390000002061	ENSGT00940000156172.b	ENSGT00530000063690.a.b.a.b.d #22	ENSGT00940000157988	ENSGT00940000155294	ENSGT00390000001057	ENSGT00940000157068	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00390000004451	ENSGT00940000159419	ENSGT00530000064276	ENSGT00390000001846	ENSGT00940000159542	ENSGT00940000158224	ENSGT00940000156473	ENSGT00940000158635	ENSGT00940000159124	ENSGT00940000156130.b
Cebidae_a	ANCESTRAL SPECIES	61	ENSGT00940000157353	ENSGT00940000157414	ENSGT00940000156907	ENSGT00940000165104	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00940000154634.c.ab	ENSGT00940000162398	ENSGT00940000160340.c	ENSGT00940000161845	ENSGT00940000160445	ENSGT00940000154530.r.b.a.b	ENSGT00390000002061	ENSGT00940000156172.b	ENSGT00530000063690.a.b.a.b.d #22	ENSGT00940000157988	ENSGT00940000155294	ENSGT00390000001057	ENSGT00940000157068	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00390000004451	ENSGT00940000159419	ENSGT00530000064276	ENSGT00940000159542	ENSGT00940000158224	ENSGT00940000156473	ENSGT00940000158635	ENSGT00940000159124	ENSGT00940000156130.b	ENSGT00390000000742
Capuchin	MODERN SPECIES	22	RALYL (ENSCCAG00000025003)	ENSCCAG00000022816	ENSCCAG00000022591	CHMP4C (ENSCCAG00000025330)	ZFAND1 (ENSCCAG00000017281)	IMPA1 (ENSCCAG00000004352)	ENSCCAG00000022643	FABP12 (ENSCCAG00000029659)	FABP4 (ENSCCAG00000037151)	FABP9 (ENSCCAG00000034511)	PMP2 (ENSCCAG00000027113)	FABP5 (ENSCCAG00000034226)	ENSCCAG00000033845	PAG1 (ENSCCAG00000032193)	ZNF704 (ENSCCAG00000028960)	ENSCCAG00000021608 #22	ZBTB10 (ENSCCAG00000035024)	TPD52 (ENSCCAG00000028562)	MRPS28 (ENSCCAG00000022534)	HEY1 (ENSCCAG00000028786)	STMN2 (ENSCCAG00000031143)	EIF3K (ENSCCAG00000029206)	ENSCCAG00000029483	IL7 (ENSCCAG00000032867)	ZC2HC1A (ENSCCAG00000022919)	PKIA (ENSCCAG00000018464)	ENSCCAG00000000493	ZFHX4 (ENSCCAG00000026493)	ENSCCAG00000028207	HNF4G (ENSCCAG00000026351)	ENSCCAG00000037810
Tarsier	MODERN SPECIES	3871																OCIAD2 (ENSTSYG00000009227) #22	ENSTSYG00000005793 #23
Strepsirrhini	DUPLICATION
Strepsirrhini	ANCESTRAL SPECIES	18	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b.e #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000166149	ENSGT00900000143503
Lemuriformes	ANCESTRAL SPECIES	39	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b.e #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Mouse lemur	MODERN SPECIES	23	ENSMICG00000043369	MAGI1 (ENSMICG00000009535)	ENSMICG00000046117	GSX2 (ENSMICG00000027995) #10	CHIC2 (ENSMICG00000034358) #11	LNX1 (ENSMICG00000008163) #12	FIP1L1 (ENSMICG00000008149)	ENSMICG00000030479 #14	ENSMICG00000048001 #14	RASL11B (ENSMICG00000042188) #15	SPATA18 (ENSMICG00000012954) #17	SGCB (ENSMICG00000004494) #18	ENSMICG00000042369 #19	DCUN1D4 (ENSMICG00000012931) #20	CWH43 (ENSMICG00000004623) #21	OCIAD2 (ENSMICG00000006147) #22	OCIAD1 (ENSMICG00000006142) #23	FRYL (ENSMICG00000026961) #24	ENSMICG00000043813 #25	ENSMICG00000011602 #26	ENSMICG00000044443 #28	TXK (ENSMICG00000034723) #29	NIPAL1 (ENSMICG00000032802) #30	CNGA1 (ENSMICG00000036947) #31	NFXL1 (ENSMICG00000008116) #32	CORIN (ENSMICG00000010493) #33	ENSMICG00000010477 #34	ENSMICG00000010067	ENSMICG00000037942	SLC30A9 (ENSMICG00000016314)	BEND4 (ENSMICG00000014479)
Lemuriformes_a	ANCESTRAL SPECIES	30	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b.e #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Coquerels sifaka	MODERN SPECIES	170				ENSPCOG00000024908	ENSPCOG00000023015	ENSPCOG00000016401	ENSPCOG00000027286	UBQLN2 (ENSPCOG00000005719)	ENSPCOG00000023256 #14	RASL11B (ENSPCOG00000019628) #15	ENSPCOG00000007319 #16	SPATA18 (ENSPCOG00000021115) #17	LRRC66 (ENSPCOG00000022176) #19	DCUN1D4 (ENSPCOG00000022124) #20	CWH43 (ENSPCOG00000023456) #21	OCIAD2 (ENSPCOG00000018962) #22	ENSPCOG00000023894 #23	FRYL (ENSPCOG00000023750) #24	SLC10A4 (ENSPCOG00000002435) #26	SLAIN2 (ENSPCOG00000018261) #27	TEC (ENSPCOG00000014627) #28	TXK (ENSPCOG00000027175) #29	NIPAL1 (ENSPCOG00000015001) #30	CNGA1 (ENSPCOG00000005717) #31	NFXL1 (ENSPCOG00000018897) #32	CORIN (ENSPCOG00000002135) #33	ATP10D (ENSPCOG00000011573) #34	COMMD8 (ENSPCOG00000025434) #35	GABRB1 (ENSPCOG00000028325) #36	GABRA4 (ENSPCOG00000022806) #37	GABRA2 (ENSPCOG00000020347)
Greater bamboo lemur	MODERN SPECIES	178	KDR (ENSPSMG00000020248) #7	KIT (ENSPSMG00000020340) #8	PDGFRA (ENSPSMG00000020413) #9	GSX2 (ENSPSMG00000020423) #10	CHIC2 (ENSPSMG00000020440) #11	LNX1 (ENSPSMG00000020471) #12	FIP1L1 (ENSPSMG00000020888)	SCFD2 (ENSPSMG00000021233) #14	RASL11B (ENSPSMG00000021259) #15	ENSPSMG00000021331 #16	SPATA18 (ENSPSMG00000021358) #17	SGCB (ENSPSMG00000021382) #18	DCUN1D4 (ENSPSMG00000021445) #20	ENSPSMG00000021464	CWH43 (ENSPSMG00000021491) #21	OCIAD2 (ENSPSMG00000021515) #22	OCIAD1 (ENSPSMG00000021639) #23	FRYL (ENSPSMG00000021994) #24	ENSPSMG00000022122 #25	SLC10A4 (ENSPSMG00000022124) #26	SLAIN2 (ENSPSMG00000022153) #27	TEC (ENSPSMG00000022167) #28	TXK (ENSPSMG00000022176) #29	NIPAL1 (ENSPSMG00000022189) #30	CNGA1 (ENSPSMG00000022192) #31	NFXL1 (ENSPSMG00000022219) #32	CORIN (ENSPSMG00000022304) #33	ATP10D (ENSPSMG00000022336) #34	COMMD8 (ENSPSMG00000022342) #35	ENSPSMG00000022345	GABRB1 (ENSPSMG00000022375) #36
Bushbaby	MODERN SPECIES	198	ENSOGAG00000025123	PDGFRA (ENSOGAG00000012544) #9	GSX2 (ENSOGAG00000015271) #10	CHIC2 (ENSOGAG00000009570) #11	LNX1 (ENSOGAG00000009552) #12	FIP1L1 (ENSOGAG00000009545)	ENSOGAG00000009543 #14	ENSOGAG00000031587 #14	RASL11B (ENSOGAG00000009539) #15	USP46 (ENSOGAG00000008762) #16	SPATA18 (ENSOGAG00000026234) #17	SGCB (ENSOGAG00000005669) #18	LRRC66 (ENSOGAG00000025206) #19	DCUN1D4 (ENSOGAG00000012891) #20	CWH43 (ENSOGAG00000001101) #21	OCIAD2 (ENSOGAG00000011039) #22	OCIAD1 (ENSOGAG00000009160) #23	FRYL (ENSOGAG00000004514) #24	SLC10A4 (ENSOGAG00000026350) #26	SLAIN2 (ENSOGAG00000004220) #27	TEC (ENSOGAG00000004217) #28	TXK (ENSOGAG00000004215) #29	NIPAL1 (ENSOGAG00000005452) #30	CNGA1 (ENSOGAG00000026326) #31	NFXL1 (ENSOGAG00000006702) #32	CORIN (ENSOGAG00000006697) #33	ATP10D (ENSOGAG00000024677) #34	COMMD8 (ENSOGAG00000013803) #35	ENSOGAG00000013800	ENSOGAG00000024581 ##36	GABRA4 (ENSOGAG00000013796) #37
Strepsirrhini	ANCESTRAL SPECIES	15	ENSGT00940000157414	ENSGT00940000156907	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00950000182808.b.a ##26	ENSGT00940000154634.c.`b.a	ENSGT00940000154634.c.`b.b	ENSGT00940000162398	ENSGT00940000160340.c	ENSGT00940000161845	ENSGT00940000160445	ENSGT00940000154530.s	ENSGT00390000002061	ENSGT00940000156172.b	ENSGT00530000063690.a.b.a.b.f #22	ENSGT00940000157988	ENSGT00940000155294	ENSGT00390000001057	ENSGT00940000157068	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00390000004451	ENSGT00940000159419	ENSGT00530000064276	ENSGT00390000001846	ENSGT00940000159542	ENSGT00860000136016	ENSGT00940000158224	ENSGT00940000156473	ENSGT00940000158635	ENSGT00940000159124
Lemuriformes	ANCESTRAL SPECIES	24	ENSGT00940000156907	ENSGT00940000165104	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00950000182808.b.a ##26	ENSGT00940000154634.c.`b.a	ENSGT00940000154634.c.`b.b	ENSGT00940000162398	ENSGT00940000160340.c	ENSGT00940000161845	ENSGT00940000160445	ENSGT00940000154530.s	ENSGT00390000002061	ENSGT00940000156172.b	ENSGT00530000063690.a.b.a.b.f #22	ENSGT00940000157988	ENSGT00940000155294	ENSGT00390000001057	ENSGT00940000157068	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00390000004451	ENSGT00940000159419	ENSGT00530000064276	ENSGT00390000001846	ENSGT00940000159542	ENSGT00860000136016	ENSGT00940000158224	ENSGT00940000156473	ENSGT00940000158635	ENSGT00940000159124
Lemuriformes_a	ANCESTRAL SPECIES	68		ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00950000182808.b.a ##26	ENSGT00940000154634.c.`b.a	ENSGT00940000154634.c.`b.b	ENSGT00940000154634.c.ab	ENSGT00940000162398	ENSGT00940000160340.c	ENSGT00940000161845	ENSGT00940000160445	ENSGT00940000154530.s	ENSGT00390000002061	ENSGT00940000156172.b	ENSGT00530000063690.a.b.a.b.f #22	ENSGT00940000157988	ENSGT00940000155294	ENSGT00390000001057	ENSGT00940000157068	ENSGT01030000234597.a.b.b.e.a.a	ENSGT00390000004451	ENSGT00940000159419	ENSGT00530000064276	ENSGT00390000001846	ENSGT00940000159542	ENSGT00860000136016	ENSGT00940000158224	ENSGT00940000156473	ENSGT00940000158635	ENSGT00940000159124
Coquerels sifaka	MODERN SPECIES	927			ENSPCOG00000016096	SNX16 (ENSPCOG00000017653)	CHMP4C (ENSPCOG00000021797)	ENSPCOG00000027736	IMPA1 (ENSPCOG00000017260)	ENSPCOG00000017382	FABP12 (ENSPCOG00000026163)	FABP4 (ENSPCOG00000017502)	FABP9 (ENSPCOG00000028580)	PMP2 (ENSPCOG00000009800)	FABP5 (ENSPCOG00000014694)	PAG1 (ENSPCOG00000005873)	ZNF704 (ENSPCOG00000023696)	ENSPCOG00000022429 #22	ZBTB10 (ENSPCOG00000020997)	ENSPCOG00000027944	TPD52 (ENSPCOG00000026112)	MRPS28 (ENSPCOG00000003866)	HEY1 (ENSPCOG00000008994)	STMN2 (ENSPCOG00000002156)	IL7 (ENSPCOG00000015874)	PKIA (ENSPCOG00000027170)	ZFHX4 (ENSPCOG00000021426)	ENSPCOG00000020102	HNF4G (ENSPCOG00000027528)	CRISPLD1 (ENSPCOG00000023313)	PI15 (ENSPCOG00000022081)	GDAP1 (ENSPCOG00000014479)	JPH1 (ENSPCOG00000024363)
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00900000143503
Tree shrew	MODERN SPECIES	286																OCIAD2 (ENSTBEG00000012450) #22	ENSTBEG00000012373 #23
Glires	ANCESTRAL SPECIES	8	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00900000143503
Lagomorpha	ANCESTRAL SPECIES	157											ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000166149
Rabbit	MODERN SPECIES	11	CTSB (ENSOCUG00000016580)	DEFB136 (ENSOCUG00000006244)	ENSOCUG00000000221	ENSOCUG00000034389	ENSOCUG00000037755	ENSOCUG00000024761	DEFB109B (ENSOCUG00000037513)	ENSOCUG00000029122	SPATA18 (ENSOCUG00000007989) #17	ENSOCUG00000030792	SGCB (ENSOCUG00000005474) #18	LRRC66 (ENSOCUG00000005466) #19	DCUN1D4 (ENSOCUG00000012352) #20	ENSOCUG00000039350	CWH43 (ENSOCUG00000017815) #21	OCIAD2 (ENSOCUG00000007907) #22	OCIAD1 (ENSOCUG00000020964) #23	FRYL (ENSOCUG00000009628) #24	ENSOCUG00000034026 #25	SLC10A4 (ENSOCUG00000009624) #26	SLAIN2 (ENSOCUG00000009618) #27	TXK (ENSOCUG00000007648) #29	TEC (ENSOCUG00000007656) #28	NIPAL1 (ENSOCUG00000007643) #30	CNGA1 (ENSOCUG00000006384) #31	NFXL1 (ENSOCUG00000008876) #32	ENSOCUG00000033548	CORIN (ENSOCUG00000008858) #33	ATP10D (ENSOCUG00000008840) #34	COMMD8 (ENSOCUG00000008834) #35	ENSOCUG00000027343
Pika	MODERN SPECIES	155															CWH43 (ENSOPRG00000001270) #21	OCIAD2 (ENSOPRG00000001254) #22	OCIAD1 (ENSOPRG00000001239) #23
Rodentia	ANCESTRAL SPECIES	13	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00900000143503
Rodentia_B	ANCESTRAL SPECIES	19	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Kangaroo rat	MODERN SPECIES	327	Srd5a3 (ENSDORG00000008012)	Kdr (ENSDORG00000006837) #7	Kit (ENSDORG00000007317) #8	Pdgfra (ENSDORG00000002763) #9	Gsx2 (ENSDORG00000000416) #10	Chic2 (ENSDORG00000027994) #11	Lnx1 (ENSDORG00000005635) #12	ENSDORG00000005629	Scfd2 (ENSDORG00000005627) #14	Rasl11b (ENSDORG00000030008) #15	Usp46 (ENSDORG00000005800) #16	ENSDORG00000013679 #17	Sgcb (ENSDORG00000009646) #18	Dcun1d4 (ENSDORG00000009641) #20	Cwh43 (ENSDORG00000012169) #21	Ociad2 (ENSDORG00000016565) #22	ENSDORG00000014483 #23	Fryl (ENSDORG00000010559) #24	Slc10a4-ps (ENSDORG00000010557) #26	ENSDORG00000013286 #27	Tec (ENSDORG00000007674) #28	Txk (ENSDORG00000007673) #29	Nipal1 (ENSDORG00000028905) #30	ENSDORG00000004728 #31	Nfxl1 (ENSDORG00000004725) #32	Corin (ENSDORG00000016468) #33	Atp10d (ENSDORG00000016466) #34	Commd8 (ENSDORG00000023178) #35	Gabrb1 (ENSDORG00000010035) #36	Gabra4 (ENSDORG00000010032) #37	Gabra2 (ENSDORG00000011516)
Myomorpha	ANCESTRAL SPECIES	19	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00900000143492	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Lesser Egyptian jerboa	MODERN SPECIES	68	Ivns1abp (ENSJJAG00000020317)	Kit (ENSJJAG00000002257) #8	Pdgfra (ENSJJAG00000015846) #9	Gsx2 (ENSJJAG00000011370) #10	Chic2 (ENSJJAG00000022415) #11	Lnx1 (ENSJJAG00000011865) #12	ENSJJAG00000013826	ENSJJAG00000021984	Scfd2 (ENSJJAG00000012848) #14	Rasl11b (ENSJJAG00000022168) #15	Usp46 (ENSJJAG00000014611) #16	ENSJJAG00000019112 #17	Sgcb (ENSJJAG00000014651) #18	Dcun1d4 (ENSJJAG00000004315) #20	Cwh43 (ENSJJAG00000003882) #21	Ociad2 (ENSJJAG00000014970) #22	ENSJJAG00000022501 #23	ENSJJAG00000000670	ENSJJAG00000017344 #24	ENSJJAG00000000411 #24	ENSJJAG00000021698 #24	ENSJJAG00000021180 #25	Slc10a4 (ENSJJAG00000014813) #26	Gm10135 (ENSJJAG00000009677)	ENSJJAG00000005087 #27	ENSJJAG00000007686	ENSJJAG00000024258	Tec (ENSJJAG00000019635) #28	Txk (ENSJJAG00000023369) #29	Nipal1 (ENSJJAG00000005517) #30	Cnga1 (ENSJJAG00000023607) #31
Muroidea	ANCESTRAL SPECIES	17	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00900000143492	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00900000143492	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Murinae	ANCESTRAL SPECIES	12	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36
Mus	ANCESTRAL SPECIES	14	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36
Ryukyu mouse	MODERN SPECIES	14	Kit (MGP_CAROLIEiJ_G0027310) #8	Pdgfra (MGP_CAROLIEiJ_G0027309) #9	Bicdl1 (MGP_CAROLIEiJ_G0027308)	Gsx2 (MGP_CAROLIEiJ_G0027307) #10	Chic2 (MGP_CAROLIEiJ_G0027306) #11	Lnx1 (MGP_CAROLIEiJ_G0027305) #12	Fip1l1 (MGP_CAROLIEiJ_G0027304)	Scfd2 (MGP_CAROLIEiJ_G0027303) #14	Rasl11b (MGP_CAROLIEiJ_G0027302) #15	Usp46 (MGP_CAROLIEiJ_G0027301) #16	Spata18 (MGP_CAROLIEiJ_G0027300) #17	Sgcb (MGP_CAROLIEiJ_G0027299) #18	MGP_CAROLIEiJ_G0027298	Dcun1d4 (MGP_CAROLIEiJ_G0027297) #20	Cwh43 (MGP_CAROLIEiJ_G0027296) #21	Ociad2 (MGP_CAROLIEiJ_G0027295) #22	Ociad1 (MGP_CAROLIEiJ_G0027294) #23	Fryl (MGP_CAROLIEiJ_G0027293) #24	Gm10135 (MGP_CAROLIEiJ_G0027292)	Slain2 (MGP_CAROLIEiJ_G0027291) #27	Tec (MGP_CAROLIEiJ_G0027290) #28	Txk (MGP_CAROLIEiJ_G0027289) #29	Nipal1 (MGP_CAROLIEiJ_G0027288) #30	Cnga1 (MGP_CAROLIEiJ_G0027287) #31	MGP_CAROLIEiJ_G0027285 #26	Zar1 (MGP_CAROLIEiJ_G0027284) #25	Nfxl1 (MGP_CAROLIEiJ_G0027283) #32	Corin (MGP_CAROLIEiJ_G0027282) #33	MGP_CAROLIEiJ_G0008954 #34	Commd8 (MGP_CAROLIEiJ_G0027281) #35	Gabrb1 (MGP_CAROLIEiJ_G0027280) #36
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36
spretus	MODERN SPECIES	14	Kdr (MGP_SPRETEiJ_G0028305) #7	Kit (MGP_SPRETEiJ_G0028304) #8	Pdgfra (MGP_SPRETEiJ_G0028303) #9	Gsx2 (MGP_SPRETEiJ_G0028302) #10	Chic2 (MGP_SPRETEiJ_G0028301) #11	Lnx1 (MGP_SPRETEiJ_G0028300) #12	Fip1l1 (MGP_SPRETEiJ_G0028299)	Scfd2 (MGP_SPRETEiJ_G0028298) #14	Rasl11b (MGP_SPRETEiJ_G0028297) #15	Usp46 (MGP_SPRETEiJ_G0028296) #16	Spata18 (MGP_SPRETEiJ_G0028295) #17	Sgcb (MGP_SPRETEiJ_G0028294) #18	MGP_SPRETEiJ_G0028293	Dcun1d4 (MGP_SPRETEiJ_G0028292) #20	Cwh43 (MGP_SPRETEiJ_G0028291) #21	Ociad2 (MGP_SPRETEiJ_G0028290) #22	Ociad1 (MGP_SPRETEiJ_G0028289) #23	Fryl (MGP_SPRETEiJ_G0028288) #24	MGP_SPRETEiJ_G0028287 #25	Slc10a4-ps (MGP_SPRETEiJ_G0028286) #26	MGP_SPRETEiJ_G0028285 #26	Gm10135 (MGP_SPRETEiJ_G0028284)	Slain2 (MGP_SPRETEiJ_G0028283) #27	Tec (MGP_SPRETEiJ_G0028282) #28	Txk (MGP_SPRETEiJ_G0028281) #29	Nipal1 (MGP_SPRETEiJ_G0028280) #30	Cnga1 (MGP_SPRETEiJ_G0028279) #31	Nfxl1 (MGP_SPRETEiJ_G0028278) #32	Corin (MGP_SPRETEiJ_G0028277) #33	MGP_SPRETEiJ_G0009414 #34	Commd8 (MGP_SPRETEiJ_G0028276) #35
Steppe mouse	MODERN SPECIES	274	Gsx2 (ENSMSIG00000026518) #10	Chic2 (ENSMSIG00000026507) #11	ENSMSIG00000026501	Lnx1 (ENSMSIG00000026465) #12	Fip1l1 (ENSMSIG00000026147)	Scfd2 (ENSMSIG00000026110) #14	Rasl11b (ENSMSIG00000026099) #15	ENSMSIG00000026077	Usp46 (ENSMSIG00000026049) #16	ENSMSIG00000026041	Spata18 (ENSMSIG00000025979) #17	Sgcb (ENSMSIG00000025957) #18	Lrrc66 (ENSMSIG00000025948) #19	Dcun1d4 (ENSMSIG00000025811) #20	Cwh43 (ENSMSIG00000025727) #21	ENSMSIG00000025682 #22	Ociad1 (ENSMSIG00000025586) #23	Fryl (ENSMSIG00000025235) #24	Zar1 (ENSMSIG00000025195) #25	ENSMSIG00000025179 #26	Gm10135 (ENSMSIG00000025164)	Slain2 (ENSMSIG00000025122) #27	Tec (ENSMSIG00000025047) #28	Txk (ENSMSIG00000024944) #29	Nipal1 (ENSMSIG00000024929) #30	ENSMSIG00000024923
Mouse	MODERN SPECIES	14	Kdr (ENSMUSG00000062960) #7	Kit (ENSMUSG00000005672) #8	Pdgfra (ENSMUSG00000029231) #9	Gsx2 (ENSMUSG00000035946) #10	Chic2 (ENSMUSG00000029229) #11	Lnx1 (ENSMUSG00000029228) #12	Fip1l1 (ENSMUSG00000029227)	Scfd2 (ENSMUSG00000062110) #14	Rasl11b (ENSMUSG00000049907) #15	Usp46 (ENSMUSG00000054814) #16	Spata18 (ENSMUSG00000029155) #17	Sgcb (ENSMUSG00000029156) #18	Lrrc66 (ENSMUSG00000067206) #19	Dcun1d4 (ENSMUSG00000051674) #20	Cwh43 (ENSMUSG00000029154) #21	Ociad2 (ENSMUSG00000029153) #22	Ociad1 (ENSMUSG00000029152) #23	Fryl (ENSMUSG00000070733) #24	Slc10a4 (ENSMUSG00000029219) #26	Gm10135 (ENSMUSG00000063656)	Slain2 (ENSMUSG00000036087) #27	Tec (ENSMUSG00000029217) #28	Txk (ENSMUSG00000054892) #29	Nipal1 (ENSMUSG00000067219) #30	Cnga1 (ENSMUSG00000067220) #31	Slc10a4-ps (ENSMUSG00000060204) #26	Zar1 (ENSMUSG00000063935) #25	Nfxl1 (ENSMUSG00000072889) #32	Corin (ENSMUSG00000005220) #33	Atp10d (ENSMUSG00000046808) #34	Commd8 (ENSMUSG00000029213) #35
Shrew mouse	MODERN SPECIES	4	Kdr (MGP_PahariEiJ_G0017091) #7	Kit (MGP_PahariEiJ_G0017090) #8	Pdgfra (MGP_PahariEiJ_G0017089) #9	Gsx2 (MGP_PahariEiJ_G0017088) #10	Chic2 (MGP_PahariEiJ_G0017087) #11	Lnx1 (MGP_PahariEiJ_G0017086) #12	Fip1l1 (MGP_PahariEiJ_G0017085)	Scfd2 (MGP_PahariEiJ_G0017084) #14	Rasl11b (MGP_PahariEiJ_G0017083) #15	Usp46 (MGP_PahariEiJ_G0017082) #16	Spata18 (MGP_PahariEiJ_G0017081) #17	Sgcb (MGP_PahariEiJ_G0017080) #18	MGP_PahariEiJ_G0017079	Dcun1d4 (MGP_PahariEiJ_G0017078) #20	Cwh43 (MGP_PahariEiJ_G0017077) #21	Ociad2 (MGP_PahariEiJ_G0017076) #22	Ociad1 (MGP_PahariEiJ_G0017075) #23	Fryl (MGP_PahariEiJ_G0017074) #24	Zar1 (MGP_PahariEiJ_G0017073) #25	Slc10a4-ps (MGP_PahariEiJ_G0017072) #26	Slc10a4 (MGP_PahariEiJ_G0017071) #26	Gm10135 (MGP_PahariEiJ_G0017070)	Slain2 (MGP_PahariEiJ_G0017069) #27	Tec (MGP_PahariEiJ_G0017068) #28	Txk (MGP_PahariEiJ_G0017067) #29	Nipal1 (MGP_PahariEiJ_G0017066) #30	Cnga1 (MGP_PahariEiJ_G0017065) #31	Nfxl1 (MGP_PahariEiJ_G0017064) #32	Corin (MGP_PahariEiJ_G0017063) #33	MGP_PahariEiJ_G0008413 #34	Commd8 (MGP_PahariEiJ_G0017062) #35
Rat	MODERN SPECIES	5	ENSRNOG00000063288	Pdgfra (ENSRNOG00000002244) #9	Gsx2 (ENSRNOG00000002266) #10	Chic2 (ENSRNOG00000002267) #11	Lnx1 (ENSRNOG00000002272) #12	Fip1l1 (ENSRNOG00000002275)	Scfd2 (ENSRNOG00000026828) #14	Rasl11b (ENSRNOG00000002097) #15	Usp46 (ENSRNOG00000002106) #16	LOC100363494 (ENSRNOG00000068757)	Spata18 (ENSRNOG00000002120) #17	Sgcb (ENSRNOG00000002135) #18	Lrrc66 (ENSRNOG00000026585) #19	Dcun1d4 (ENSRNOG00000002152) #20	Cwh43 (ENSRNOG00000002174) #21	Ociad2 (ENSRNOG00000002196) #22	Ociad1 (ENSRNOG00000002205) #23	Fryl (ENSRNOG00000002248) #24	Zar1 (ENSRNOG00000026150) #25	Slc10a4 (ENSRNOG00000026091) #26	Slain2 (ENSRNOG00000002271) #27	Gm10135 (ENSRNOG00000064628)	Tec (ENSRNOG00000002278) #28	Txk (ENSRNOG00000025925) #29	Nipal1 (ENSRNOG00000025882) #30	Cnga1 (ENSRNOG00000004778) #31	Nfxl1 (ENSRNOG00000058588) #32	Corin (ENSRNOG00000002302) #33	ENSRNOG00000069538	Atp10d (ENSRNOG00000002312) #34	Commd8 (ENSRNOG00000002320) #35
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00900000143492	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00900000143492	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Golden Hamster	MODERN SPECIES	720	Kdr (ENSMAUG00000016126) #7	ENSMAUG00000013726 #8	Pdgfra (ENSMAUG00000018986) #9	Gsx2 (ENSMAUG00000022163) #10	Chic2 (ENSMAUG00000012879) #11	Lnx1 (ENSMAUG00000021129) #12	Fip1l1 (ENSMAUG00000010526)	Scfd2 (ENSMAUG00000011399) #14	Rasl11b (ENSMAUG00000003048) #15	Usp46 (ENSMAUG00000017316) #16	Spata18 (ENSMAUG00000011598) #17	Sgcb (ENSMAUG00000006887) #18	Lrrc66 (ENSMAUG00000009663) #19	Dcun1d4 (ENSMAUG00000000472) #20	Cwh43 (ENSMAUG00000008567) #21	Ociad2 (ENSMAUG00000014577) #22	ENSMAUG00000015840 #23	ENSMAUG00000017420	ENSMAUG00000012930 #24	ENSMAUG00000012913 #24	ENSMAUG00000016747 #26	Gm10135 (ENSMAUG00000000502)	ENSMAUG00000009182 #27	Txk (ENSMAUG00000016831) #29	Nipal1 (ENSMAUG00000016715) #30	Cnga1 (ENSMAUG00000020046) #31	Nfxl1 (ENSMAUG00000021446) #32	Corin (ENSMAUG00000013589) #33	ENSMAUG00000018427 #34	Commd8 (ENSMAUG00000019027) #35	Gabrb1 (ENSMAUG00000018940) #36
Chinese hamster chok1gshd	MODERN SPECIES	44	Chic2 (ENSCGRG00001024567) #11	Lnx1 (ENSCGRG00001011729) #12	Fip1l1 (ENSCGRG00001018568)	Scfd2 (ENSCGRG00001012042) #14	Rasl11b (ENSCGRG00001011283) #15	ENSCGRG00001002572	Usp46 (ENSCGRG00001018619) #16	ENSCGRG00001000842	ENSCGRG00001013783	Spata18 (ENSCGRG00001005385) #17	Sgcb (ENSCGRG00001022740) #18	Lrrc66 (ENSCGRG00001017360) #19	ENSCGRG00001011436	Dcun1d4 (ENSCGRG00001001891) #20	Cwh43 (ENSCGRG00001001137) #21	Ociad2 (ENSCGRG00001021466) #22	ENSCGRG00001016984 #23	Fryl (ENSCGRG00001000452) #24	Zar1 (ENSCGRG00001020317) #25	Slc10a4 (ENSCGRG00001013992) #26	Gm10135 (ENSCGRG00001010052)	Slain2 (ENSCGRG00001005700) #27	Tec (ENSCGRG00001016993) #28	Txk (ENSCGRG00001010710) #29	Nipal1 (ENSCGRG00001000663) #30	Cnga1 (ENSCGRG00001020845) #31	Nfxl1 (ENSCGRG00001013384) #32	Corin (ENSCGRG00001025041) #33	ENSCGRG00001014729 #34	ENSCGRG00001013940 #34	Commd8 (ENSCGRG00001012401) #35
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00860000136278	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36
Northern American deer mouse	MODERN SPECIES	1	ENSPEMG00000025221	Pdgfra (ENSPEMG00000007844) #9	Gsx2 (ENSPEMG00000008341) #10	Chic2 (ENSPEMG00000016307) #11	Lnx1 (ENSPEMG00000001631) #12	Fip1l1 (ENSPEMG00000002025)	ENSPEMG00000026634	Scfd2 (ENSPEMG00000009457) #14	Rasl11b (ENSPEMG00000025524) #15	Usp46 (ENSPEMG00000009974) #16	Spata18 (ENSPEMG00000024192) #17	Sgcb (ENSPEMG00000024200) #18	Lrrc66 (ENSPEMG00000017432) #19	Dcun1d4 (ENSPEMG00000009638) #20	Cwh43 (ENSPEMG00000004208) #21	Ociad2 (ENSPEMG00000003543) #22	Ociad1 (ENSPEMG00000018262) #23	Fryl (ENSPEMG00000011628) #24	Zar1 (ENSPEMG00000021539) #25	Slc10a4-ps (ENSPEMG00000027365) #26	Gm10135 (ENSPEMG00000015600)	Slain2 (ENSPEMG00000025573) #27	Tec (ENSPEMG00000008562) #28	Txk (ENSPEMG00000022661) #29	Nipal1 (ENSPEMG00000028846) #30	Cnga1 (ENSPEMG00000022363) #31	Nfxl1 (ENSPEMG00000021617) #32	Corin (ENSPEMG00000022577) #33	ENSPEMG00000025175 #34	ENSPEMG00000003618 #34	ENSPEMG00000017813 #35
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	349	Kdr (ENSMOCG00000017085) #7	Kit (ENSMOCG00000007652) #8	Pdgfra (ENSMOCG00000012103) #9	Gsx2 (ENSMOCG00000010227) #10	Chic2 (ENSMOCG00000000811) #11	Lnx1 (ENSMOCG00000015978) #12	Fip1l1 (ENSMOCG00000008020)	Scfd2 (ENSMOCG00000015774) #14	Rasl11b (ENSMOCG00000022471) #15	Usp46 (ENSMOCG00000016898) #16	Spata18 (ENSMOCG00000019737) #17	Sgcb (ENSMOCG00000000430) #18	Lrrc66 (ENSMOCG00000017330) #19	Dcun1d4 (ENSMOCG00000012545) #20	Cwh43 (ENSMOCG00000009924) #21	ENSMOCG00000000283 #22	ENSMOCG00000000836 #23	ENSMOCG00000016810	Fryl (ENSMOCG00000012881) #24	Zar1 (ENSMOCG00000001183) #25	Slc10a4-ps (ENSMOCG00000019194) #26	Gm10135 (ENSMOCG00000012163)	Slain2 (ENSMOCG00000017102) #27	Tec (ENSMOCG00000014997) #28	Txk (ENSMOCG00000007298) #29	Nipal1 (ENSMOCG00000013121) #30	Cnga1 (ENSMOCG00000022062) #31	Nfxl1 (ENSMOCG00000013575) #32	Corin (ENSMOCG00000022718) #33	Atp10d (ENSMOCG00000010507) #34	Commd8 (ENSMOCG00000010168) #35
Prairie vole	MODERN SPECIES	15	Crebbp (ENSMOCG00000016830)	Trap1 (ENSMOCG00000010441)	Dnase1 (ENSMOCG00000018529)	ENSMOCG00000004024	Nlrc3 (ENSMOCG00000009820)	Cluap1 (ENSMOCG00000004106)	1700037C18Rik (ENSMOCG00000008711)	Naa60 (ENSMOCG00000016632)	Zfp597 (ENSMOCG00000005901)	Zfp174 (ENSMOCG00000004638)	ENSMOCG00000001631	ENSMOCG00000010482	ENSMOCG00000002263	Zfp263 (ENSMOCG00000021995)	Mefv (ENSMOCG00000021086)	ENSMOCG00000008987 #22	ENSMOCG00000001000	ENSMOCG00000001991	ENSMOCG00000002042	ENSMOCG00000001457	ENSMOCG00000001722	ENSMOCG00000018631	Zfp13 (ENSMOCG00000015466)	Zfp213 (ENSMOCG00000021846)	Zscan10 (ENSMOCG00000006281)	Mmp25 (ENSMOCG00000002390)	Bicdl2 (ENSMOCG00000019311)	Thoc6 (ENSMOCG00000007877)	ENSMOCG00000022196	ENSMOCG00000022275	Cldn6 (ENSMOCG00000020385)
Rodentia_A	ANCESTRAL SPECIES	20	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00900000143503
Sciuridae	ANCESTRAL SPECIES	19	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00900000143503	ENSGT00940000154245.B #36
Marmotini	ANCESTRAL SPECIES	26	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.i #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Alpin marmot	MODERN SPECIES	9	GSX2 (ENSMMMG00000020460) #10	CHIC2 (ENSMMMG00000020457) #11	LNX1 (ENSMMMG00000020305) #12	ENSMMMG00000020140	SCFD2 (ENSMMMG00000020102) #14	RASL11B (ENSMMMG00000020096) #15	ENSMMMG00000020094	ENSMMMG00000020086	USP46 (ENSMMMG00000020069) #16	ENSMMMG00000020060 #17	ENSMMMG00000020059 #17	SGCB (ENSMMMG00000020055) #18	LRRC66 (ENSMMMG00000020043) #19	DCUN1D4 (ENSMMMG00000020029) #20	CWH43 (ENSMMMG00000019997) #21	OCIAD2 (ENSMMMG00000019984) #22	OCIAD1 (ENSMMMG00000019868) #23	FRYL (ENSMMMG00000019781) #24	ENSMMMG00000019771 #25	ENSMMMG00000019763 #26	SLAIN2 (ENSMMMG00000019758) #27	TEC (ENSMMMG00000019700) #28	TXK (ENSMMMG00000019614) #29	NIPAL1 (ENSMMMG00000019609) #30	CNGA1 (ENSMMMG00000019576) #31	NFXL1 (ENSMMMG00000019525) #32	CORIN (ENSMMMG00000019455) #33	ENSMMMG00000019438 #34	ENSMMMG00000019428 #34	COMMD8 (ENSMMMG00000019422) #35	GABRB1 (ENSMMMG00000019411) #36
Marmotini_b	ANCESTRAL SPECIES	48	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121.i #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Squirrel	MODERN SPECIES	82	PDGFRA (ENSSTOG00000011314) #9	GSX2 (ENSSTOG00000023286) #10	CHIC2 (ENSSTOG00000023668) #11	LNX1 (ENSSTOG00000012178) #12	ENSSTOG00000012166	SCFD2 (ENSSTOG00000012162) #14	RASL11B (ENSSTOG00000027610) #15	ENSSTOG00000033365	USP46 (ENSSTOG00000012149) #16	ENSSTOG00000004581 #17	ENSSTOG00000032283 #17	SGCB (ENSSTOG00000004569) #18	LRRC66 (ENSSTOG00000022844) #19	DCUN1D4 (ENSSTOG00000013799) #20	CWH43 (ENSSTOG00000014976) #21	OCIAD2 (ENSSTOG00000014971) #22	OCIAD1 (ENSSTOG00000014963) #23	FRYL (ENSSTOG00000007280) #24	ZAR1 (ENSSTOG00000031847) #25	SLC10A4 (ENSSTOG00000027820) #26	SLAIN2 (ENSSTOG00000007212) #27	TEC (ENSSTOG00000015809) #28	TXK (ENSSTOG00000015802) #29	NIPAL1 (ENSSTOG00000010605) #30	CNGA1 (ENSSTOG00000001278) #31	NFXL1 (ENSSTOG00000001258) #32	CORIN (ENSSTOG00000001240) #33	ENSSTOG00000001229 #34	ENSSTOG00000029527 #34	ENSSTOG00000031460 #35	GABRB1 (ENSSTOG00000008575) #36
Arctic ground squirrel	MODERN SPECIES	2	KIT (ENSUPAG00010020754) #8	PDGFRA (ENSUPAG00010020707) #9	GSX2 (ENSUPAG00010020700) #10	CHIC2 (ENSUPAG00010020698) #11	LNX1 (ENSUPAG00010020578) #12	ENSUPAG00010020429	SCFD2 (ENSUPAG00010020412) #14	RASL11B (ENSUPAG00010020408) #15	USP46 (ENSUPAG00010020388) #16	ENSUPAG00010020376 #17	ENSUPAG00010020374 #17	SGCB (ENSUPAG00010020369) #18	LRRC66 (ENSUPAG00010020366) #19	DCUN1D4 (ENSUPAG00010020336) #20	CWH43 (ENSUPAG00010020291) #21	OCIAD2 (ENSUPAG00010020280) #22	OCIAD1 (ENSUPAG00010020236) #23	FRYL (ENSUPAG00010020086) #24	ENSUPAG00010020079 #25	ENSUPAG00010020074 #26	SLAIN2 (ENSUPAG00010020060) #27	TEC (ENSUPAG00010020011) #28	TXK (ENSUPAG00010019947) #29	NIPAL1 (ENSUPAG00010019941) #30	CNGA1 (ENSUPAG00010019928) #31	NFXL1 (ENSUPAG00010019911) #32	CORIN (ENSUPAG00010019864) #33	ATP10D (ENSUPAG00010019845) #34	COMMD8 (ENSUPAG00010019840) #35	GABRB1 (ENSUPAG00010019831) #36	GABRA4 (ENSUPAG00010019816) #37
Eurasian red squirrel	MODERN SPECIES	18	PDGFRA (ENSSVLG00005022004) #9	GSX2 (ENSSVLG00005022055) #10	CHIC2 (ENSSVLG00005022117) #11	ENSSVLG00005022179	LNX1 (ENSSVLG00005022254) #12	FIP1L1 (ENSSVLG00005022448)	SCFD2 (ENSSVLG00005022776) #14	RASL11B (ENSSVLG00005022855) #15	ENSSVLG00005022878	USP46 (ENSSVLG00005022950) #16	SPATA18 (ENSSVLG00005023119) #17	SGCB (ENSSVLG00005023300) #18	LRRC66 (ENSSVLG00005023343) #19	ENSSVLG00005023431 #20	CWH43 (ENSSVLG00005023619) #21	OCIAD2 (ENSSVLG00005023758) #22	OCIAD1 (ENSSVLG00005023852) #23	FRYL (ENSSVLG00005023963) #24	ZAR1 (ENSSVLG00005023995) #25	SLC10A4 (ENSSVLG00005024018) #26	SLAIN2 (ENSSVLG00005024044) #27	TEC (ENSSVLG00005024112) #28	TXK (ENSSVLG00005024163) #29	ENSSVLG00005024245 #30	CNGA1 (ENSSVLG00005024292) #31	NFXL1 (ENSSVLG00005024329) #32	CORIN (ENSSVLG00005024434) #33	ATP10D (ENSSVLG00005024815) #34	COMMD8 (ENSSVLG00005024853) #35	ENSSVLG00005024866	GABRB1 (ENSSVLG00005024897) #36
Hystricomorpha	ANCESTRAL SPECIES	26	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	1	FIP1L1 (ENSHGLG00000018937)	SCFD2 (ENSHGLG00000008861) #14	ENSHGLG00000035001	RASL11B (ENSHGLG00000018686) #15	ENSHGLG00000048480	USP46 (ENSHGLG00000018346) #16	ENSHGLG00000015649	SPATA18 (ENSHGLG00000040259) #17	ENSHGLG00000038499	ENSHGLG00000040271 #19	ENSHGLG00000017366 #20	ENSHGLG00000031874	ENSHGLG00000021184	CWH43 (ENSHGLG00000017904) #21	ENSHGLG00000033110	ENSHGLG00000009214 #22	OCIAD1 (ENSHGLG00000005766) #23	ENSHGLG00000007948 #24	ENSHGLG00000045336 #24	ENSHGLG00000039998 #25	SLC10A4 (ENSHGLG00000013563) #26	ENSHGLG00000000325	SLAIN2 (ENSHGLG00000019447) #27	ENSHGLG00000043919	ENSHGLG00000042797	TEC (ENSHGLG00000015780) #28	ENSHGLG00000013808 #29	NIPAL1 (ENSHGLG00000044376) #30	CNGA1 (ENSHGLG00000018977) #31	NFXL1 (ENSHGLG00000014142) #32	CORIN (ENSHGLG00000006527) #33
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000012561	ENSHGLG00000040461	ZFC3H1 (ENSHGLG00000014297)	LGR5 (ENSHGLG00000004903)	TSPAN8 (ENSHGLG00000009287)	ENSHGLG00000048295	PTPRR (ENSHGLG00000005019)	ENSHGLG00000035838	PTPRB (ENSHGLG00000017872)	ENSHGLG00000004965	ENSHGLG00000039489	ENSHGLG00000008390	ENSHGLG00000012413	ENSHGLG00000016095	ENSHGLG00000015773	ENSHGLG00000033107 #22	BEST3 (ENSHGLG00000005639)	ENSHGLG00000032589	ENSHGLG00000008737	FRS2 (ENSHGLG00000004690)	ENSHGLG00000020270	YEATS4 (ENSHGLG00000005930)	ENSHGLG00000000765	ENSHGLG00000000750	ENSHGLG00000032896	ENSHGLG00000036390	ENSHGLG00000000792	ENSHGLG00000041415	ENSHGLG00000000831	Mdm2 (ENSHGLG00000000856)	ENSHGLG00000041090
Hystricomorpha_a	ANCESTRAL SPECIES	23	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Guinea pig	MODERN SPECIES	24	SRD5A3 (ENSCPOG00000011801)	KDR (ENSCPOG00000010001) #7	KIT (ENSCPOG00000011411) #8	PDGFRA (ENSCPOG00000011782) #9	GSX2 (ENSCPOG00000005837) #10	CHIC2 (ENSCPOG00000040036) #11	LNX1 (ENSCPOG00000010775) #12	ENSCPOG00000010770	SCFD2 (ENSCPOG00000039431) #14	RASL11B (ENSCPOG00000010760) #15	USP46 (ENSCPOG00000007660) #16	ENSCPOG00000011469 #17	SGCB (ENSCPOG00000030752) #18	DCUN1D4 (ENSCPOG00000008945) #20	CWH43 (ENSCPOG00000014177) #21	ENSCPOG00000019887 #22	OCIAD1 (ENSCPOG00000011863) #23	FRYL (ENSCPOG00000009647) #24	SLC10A4 (ENSCPOG00000009644) #26	SLAIN2 (ENSCPOG00000002806) #27	TEC (ENSCPOG00000008836) #28	TXK (ENSCPOG00000014571) #29	NIPAL1 (ENSCPOG00000036596) #30	CNGA1 (ENSCPOG00000024444) #31	NFXL1 (ENSCPOG00000014371) #32	CORIN (ENSCPOG00000006957) #33	ATP10D (ENSCPOG00000006948) #34	COMMD8 (ENSCPOG00000015113) #35	GABRB1 (ENSCPOG00000035961) #36	GABRA4 (ENSCPOG00000009388) #37	GABRA2 (ENSCPOG00000023215)
Hystricomorpha_b	ANCESTRAL SPECIES	76	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248700	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532.j #17	ENSGT00390000013532.i #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26
Long-tailed chinchilla	MODERN SPECIES	154	TMEM165 (ENSCLAG00000005359)	SRD5A3 (ENSCLAG00000014169)	KDR (ENSCLAG00000010052) #7	KIT (ENSCLAG00000006440) #8	PDGFRA (ENSCLAG00000005250) #9	CHIC2 (ENSCLAG00000005438) #11	LNX1 (ENSCLAG00000005760) #12	ENSCLAG00000003675	SCFD2 (ENSCLAG00000006610) #14	RASL11B (ENSCLAG00000005450) #15	USP46 (ENSCLAG00000006241) #16	ENSCLAG00000006715 #17	SGCB (ENSCLAG00000008014) #18	DCUN1D4 (ENSCLAG00000008724) #20	CWH43 (ENSCLAG00000011864) #21	OCIAD2 (ENSCLAG00000012791) #22	OCIAD1 (ENSCLAG00000004026) #23	FRYL (ENSCLAG00000004818) #24	SLC10A4 (ENSCLAG00000009043) #26
Degu	MODERN SPECIES	60	LNX1 (ENSODEG00000010836) #12	ENSODEG00000009001	ENSODEG00000019669	ENSODEG00000008819	SCFD2 (ENSODEG00000010104) #14	RASL11B (ENSODEG00000010294) #15	USP46 (ENSODEG00000009787) #16	ENSODEG00000008705	ENSODEG00000019795	ENSODEG00000009441 #17	ENSODEG00000009977 #17	SGCB (ENSODEG00000009784) #18	ENSODEG00000009044 #20	ENSODEG00000009096	CWH43 (ENSODEG00000009451) #21	OCIAD2 (ENSODEG00000010340) #22	ENSODEG00000010537	OCIAD1 (ENSODEG00000009198) #23	FRYL (ENSODEG00000009331) #24	ENSODEG00000008772 #25	SLC10A4 (ENSODEG00000010331) #26	ENSODEG00000008159	VSNL1 (ENSODEG00000008555)	SMC6 (ENSODEG00000008987)	GEN1 (ENSODEG00000010156)	MSGN1 (ENSODEG00000009615)	ENSODEG00000019755	KCNS3 (ENSODEG00000009066)	RDH14 (ENSODEG00000008458)	NT5C1B (ENSODEG00000008929)	OSR1 (ENSODEG00000008728)
Atlantogenata	ANCESTRAL SPECIES	25	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Xenarthra	ANCESTRAL SPECIES	129														ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000166149	ENSGT00940000154713.B
Armadillo	MODERN SPECIES	2697														ENSDNOG00000040162 #20	CWH43 (ENSDNOG00000023671) #21	OCIAD2 (ENSDNOG00000045678) #22	OCIAD1 (ENSDNOG00000044168) #23	ENSDNOG00000048297	FRYL (ENSDNOG00000018958) #24	ZAR1 (ENSDNOG00000018955) #25	SLC10A4 (ENSDNOG00000031934) #26	SLAIN2 (ENSDNOG00000025559) #27	TEC (ENSDNOG00000019174) #28	TXK (ENSDNOG00000032218) #29	NIPAL1 (ENSDNOG00000030760) #30	CNGA1 (ENSDNOG00000009673) #31	NFXL1 (ENSDNOG00000037969) #32	CORIN (ENSDNOG00000004189) #33	ATP10D (ENSDNOG00000004165) #34	COMMD8 (ENSDNOG00000049641) #35	ENSDNOG00000036944
Sloth	MODERN SPECIES	3718																OCIAD2 (ENSCHOG00000001458) #22
Afrotheria	ANCESTRAL SPECIES	78	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Tenrec	MODERN SPECIES	1160																OCIAD2 (ENSETEG00000014571) #22
Afrotheria_a	ANCESTRAL SPECIES	77	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Hyrax	MODERN SPECIES	3377																OCIAD2 (ENSPCAG00000000830) #22
Elephant	MODERN SPECIES	363	ENSLAFG00000011994	PDGFRA (ENSLAFG00000010795) #9	ENSLAFG00000028670 #10	CHIC2 (ENSLAFG00000012248) #11	LNX1 (ENSLAFG00000002608) #12	FIP1L1 (ENSLAFG00000002605)	ENSLAFG00000029777 #14	ENSLAFG00000008179 #14	RASL11B (ENSLAFG00000008178) #15	USP46 (ENSLAFG00000012660) #16	SPATA18 (ENSLAFG00000000941) #17	SGCB (ENSLAFG00000008897) #18	LRRC66 (ENSLAFG00000008892) #19	DCUN1D4 (ENSLAFG00000000325) #20	CWH43 (ENSLAFG00000016893) #21	OCIAD2 (ENSLAFG00000002182) #22	OCIAD1 (ENSLAFG00000002180) #23	FRYL (ENSLAFG00000003254) #24	ENSLAFG00000003251 #25	SLC10A4 (ENSLAFG00000003247) #26	SLAIN2 (ENSLAFG00000002270) #27	TEC (ENSLAFG00000014056) #28	TXK (ENSLAFG00000014047) #29	NIPAL1 (ENSLAFG00000000555) #30	CNGA1 (ENSLAFG00000014036) #31	NFXL1 (ENSLAFG00000014027) #32	ENSLAFG00000031883 #33	ENSLAFG00000014013 #33	ATP10D (ENSLAFG00000014000) #34	COMMD8 (ENSLAFG00000009119) #35	GABRB1 (ENSLAFG00000030534) #36
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a.v #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a.v #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Diprotodontia	ANCESTRAL SPECIES	10	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a.v #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00940000159024 #37
Diprotodontia_a	ANCESTRAL SPECIES	12	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a.v #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36	ENSGT00390000001153.f
Common wonbat	MODERN SPECIES	1054	KDR (ENSVURG00010010655) #7	KIT (ENSVURG00010010615) #8	PDGFRA (ENSVURG00010010553) #9	GSX2 (ENSVURG00010010532) #10	CHIC2 (ENSVURG00010010518) #11	LNX1 (ENSVURG00010010480) #12	ENSVURG00010010337	ENSVURG00010010317 #14	ENSVURG00010010296 #14	RASL11B (ENSVURG00010010287) #15	USP46 (ENSVURG00010010270) #16	SPATA18 (ENSVURG00010010234) #17	SGCB (ENSVURG00010010202) #18	ENSVURG00010010193 #19	DCUN1D4 (ENSVURG00010010180) #20	OCIAD2 (ENSVURG00010010169) #22	OCIAD1 (ENSVURG00010010156) #23	FRYL (ENSVURG00010009965) #24	ZAR1 (ENSVURG00010009906) #25	SLC10A4 (ENSVURG00010009890) #26	SLAIN2 (ENSVURG00010009876) #27	TEC (ENSVURG00010009844) #28	ENSVURG00010009834 #29	NIPAL1 (ENSVURG00010009830) #30	CNGA1 (ENSVURG00010009825) #31	NFXL1 (ENSVURG00010009161) #32	ENSVURG00010009110 #33	ATP10D (ENSVURG00010009080) #34	COMMD8 (ENSVURG00010009076) #35	GABRB1 (ENSVURG00010009037) #36	ENSVURG00010008948
koala	MODERN SPECIES	2					LNX1 (ENSPCIG00000006544) #12	ENSPCIG00000019318	ENSPCIG00000019814 #14	ENSPCIG00000014778 #14	RASL11B (ENSPCIG00000014777) #15	USP46 (ENSPCIG00000014769) #16	SPATA18 (ENSPCIG00000007327) #17	SGCB (ENSPCIG00000007333) #18	ENSPCIG00000007334 #19	DCUN1D4 (ENSPCIG00000007336) #20	ENSPCIG00000037400	OCIAD2 (ENSPCIG00000014376) #22	ENSPCIG00000014375 #23	FRYL (ENSPCIG00000033749) #24	ENSPCIG00000004401 #25	SLC10A4 (ENSPCIG00000004406) #26	SLAIN2 (ENSPCIG00000004414) #27	TEC (ENSPCIG00000004431) #28	TXK (ENSPCIG00000004439) #29	NIPAL1 (ENSPCIG00000004445) #30	CNGA1 (ENSPCIG00000004457) #31	NFXL1 (ENSPCIG00000004519) #32	ENSPCIG00000037372 #33	ATP10D (ENSPCIG00000013820) #34	COMMD8 (ENSPCIG00000037161) #35	ENSPCIG00000032215	ENSPCIG00000032330 ##36
Opossum	MODERN SPECIES	4	LNX1 (ENSMODG00000020659) #12	ENSMODG00000020654	ENSMODG00000020649 #14	ENSMODG00000029714	ENSMODG00000024853	ENSMODG00000036443 #14	ENSMODG00000048285	RASL11B (ENSMODG00000047546) #15	ENSMODG00000044858	USP46 (ENSMODG00000020647) #16	ENSMODG00000020645 #17	SGCB (ENSMODG00000020644) #18	ENSMODG00000027580 #19	ENSMODG00000045030	DCUN1D4 (ENSMODG00000020643) #20	ENSMODG00000046359 #22	OCIAD1 (ENSMODG00000020640) #23	ENSMODG00000039904	FRYL (ENSMODG00000020638) #24	ENSMODG00000020634 #25	SLC10A4 (ENSMODG00000020633) #26	SLAIN2 (ENSMODG00000020631) #27	TEC (ENSMODG00000020628) #28	TXK (ENSMODG00000020625) #29	ENSMODG00000043371 #30	ENSMODG00000039081 #30	CNGA1 (ENSMODG00000020622) #31	NFXL1 (ENSMODG00000020621) #32	CORIN (ENSMODG00000020619) #33	ENSMODG00000050772	ATP10D (ENSMODG00000020617) #34
Sauria	ANCESTRAL SPECIES	6	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00960000189468	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.q.a #26	ENSGT00950000182808.a.a.b.b.q.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33
Archelosauria	ANCESTRAL SPECIES	4	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00960000189468	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000177950.a	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B
Cryptodira	ANCESTRAL SPECIES	2	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.q.a #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000177950.a	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B
Testudinoidea	ANCESTRAL SPECIES	10	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935.b.b #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.q.a #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000177950.a	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B
Testudinidae	ANCESTRAL SPECIES	11	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00940000156935.b.b #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.q.a #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000177950.a	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B
Abingdon island giant tortoise	MODERN SPECIES	2665											CCDC6 (ENSCABG00000006931)	SLC16A9 (ENSCABG00000006928)	ENSCABG00000006926	ENSCABG00000006925	CWH43 (ENSCABG00000006917) #21	OCIAD2 (ENSCABG00000006915) #22	OCIAD1 (ENSCABG00000006914) #23
Goode s thornscrub tortoise	MODERN SPECIES	19	ENSGEVG00005018831	KIT (ENSGEVG00005015429) #8	PDGFRA (ENSGEVG00005014354) #9	GSX2 (ENSGEVG00005014314) #10	CHIC2 (ENSGEVG00005014301) #11	LNX1 (ENSGEVG00005013644) #12	ENSGEVG00005013350	SCFD2 (ENSGEVG00005013200) #14	RASL11B (ENSGEVG00005013148) #15	USP46 (ENSGEVG00005013092) #16	ENSGEVG00005012992 #17	ENSGEVG00005012945 #17	SGCB (ENSGEVG00005012678) #18	DCUN1D4 (ENSGEVG00005012584) #20	CWH43 (ENSGEVG00005012465) #21	OCIAD2 (ENSGEVG00005012436) #22	OCIAD1 (ENSGEVG00005012410) #23	FRYL (ENSGEVG00005012010) #24	ZAR1 (ENSGEVG00005011641) #25	SLC10A4 (ENSGEVG00005011595) #26	SLAIN2 (ENSGEVG00005011517) #27	TEC (ENSGEVG00005011447) #28	ENSGEVG00005011413	TXK (ENSGEVG00005011330) #29	NIPAL1 (ENSGEVG00005010932) #30	CNGA1 (ENSGEVG00005010834) #31	NFXL1 (ENSGEVG00005010333) #32	CORIN (ENSGEVG00005010056) #33	ATP10D (ENSGEVG00005009982) #34	COMMD8 (ENSGEVG00005009671) #35	ENSGEVG00005009566
Emydidae	ANCESTRAL SPECIES	1	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935.b.b #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.q.a #26	ENSGT00950000182808.a.a.b.b.q.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b.a #28	ENSGT00940000177950.a	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
painted turtle	MODERN SPECIES	13	PDGFRA (ENSCPBG00000025039) #9	GSX2 (ENSCPBG00000025035) #10	CHIC2 (ENSCPBG00000025032) #11	ENSCPBG00000025030	ENSCPBG00000025027 #12	ENSCPBG00000025024 #12	ENSCPBG00000025019	SCFD2 (ENSCPBG00000025016) #14	RASL11B (ENSCPBG00000025014) #15	ENSCPBG00000025012	USP46 (ENSCPBG00000025005) #16	SPATA18 (ENSCPBG00000025002) #17	SGCB (ENSCPBG00000024999) #18	DCUN1D4 (ENSCPBG00000024995) #20	CWH43 (ENSCPBG00000024990) #21	OCIAD2 (ENSCPBG00000024984) #22	OCIAD1 (ENSCPBG00000024981) #23	FRYL (ENSCPBG00000024971) #24	ZAR1 (ENSCPBG00000024965) #25	ENSCPBG00000024962 #26	ENSCPBG00000024959 #26	SLAIN2 (ENSCPBG00000024953) #27	ENSCPBG00000024950 #28	ENSCPBG00000024944 #28	TXK (ENSCPBG00000024941) #29	NIPAL1 (ENSCPBG00000024934) #30	CNGA1 (ENSCPBG00000024931) #31	NFXL1 (ENSCPBG00000024927) #32	ENSCPBG00000024920 #33	ENSCPBG00000024917	SEMA6D (ENSCPBG00000024906)
Three-toed box turtle	MODERN SPECIES	570																OCIAD2 (ENSTMTG00000011830) #22
Chinese turtle	MODERN SPECIES	318	ENSPSIG00000000785	KIT (ENSPSIG00000008233) #8	PDGFRA (ENSPSIG00000006648) #9	GSX2 (ENSPSIG00000006477) #10	CHIC2 (ENSPSIG00000006349) #11	LNX1 (ENSPSIG00000005862) #12	ENSPSIG00000005407 #13	ENSPSIG00000005201 #14	ENSPSIG00000005150 #14	RASL11B (ENSPSIG00000005031) #15	USP46 (ENSPSIG00000017105) #16	SPATA18 (ENSPSIG00000016758) #17	SGCB (ENSPSIG00000016727) #18	DCUN1D4 (ENSPSIG00000016618) #20	CWH43 (ENSPSIG00000016496) #21	OCIAD2 (ENSPSIG00000016365) #22	OCIAD1 (ENSPSIG00000016211) #23	FRYL (ENSPSIG00000015534) #24	ZAR1 (ENSPSIG00000015524) #25	SLC10A4 (ENSPSIG00000015496) #26	SLAIN2 (ENSPSIG00000015175) #27	TEC (ENSPSIG00000013492) #28	TXK (ENSPSIG00000012790) #29	NIPAL1 (ENSPSIG00000011781) #30	CNGA1 (ENSPSIG00000011134) #31	NFXL1 (ENSPSIG00000010167) #32
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00960000189468	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000177950.a	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B
Aves	ANCESTRAL SPECIES	3	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Neognathae	ANCESTRAL SPECIES	5	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Passeriformes	ANCESTRAL SPECIES	4	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Passeriformes_d	ANCESTRAL SPECIES	4	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757.d #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Passeriformes_g	ANCESTRAL SPECIES	5	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757.d #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Medium ground finch	MODERN SPECIES		PDGFRA (ENSGFOG00000005584) #9	GSX2 (ENSGFOG00000005577) #10	CHIC2 (ENSGFOG00000005570) #11	ENSGFOG00000005563 #12	ENSGFOG00000005531 #12	ENSGFOG00000005511 #13	ENSGFOG00000005500	SCFD2 (ENSGFOG00000005487) #14	RASL11B (ENSGFOG00000005477) #15	USP46 (ENSGFOG00000005447) #16	ENSGFOG00000005412 #17	SGCB (ENSGFOG00000005393) #18	LRRC66 (ENSGFOG00000005375) #19	DCUN1D4 (ENSGFOG00000005349) #20	CWH43 (ENSGFOG00000005301) #21	OCIAD2 (ENSGFOG00000005274) #22	OCIAD1 (ENSGFOG00000005266) #23	FRYL (ENSGFOG00000002783) #24	SLC10A4 (ENSGFOG00000002588) #26	SLAIN2 (ENSGFOG00000002577) #27	TEC (ENSGFOG00000005021) #28	ENSGFOG00000004998 #29	ENSGFOG00000004991 #30	ENSGFOG00000004984 #30	CNGA1 (ENSGFOG00000004967) #31	ENSGFOG00000004961 #32	ENSGFOG00000004945 #32	CORIN (ENSGFOG00000004927) #33	ATP10D (ENSGFOG00000004905) #34	COMMD8 (ENSGFOG00000004879) #35	ENSGFOG00000004868
Passeroidea	ANCESTRAL SPECIES	4	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757.d #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Common canary	MODERN SPECIES	2	KIT (ENSSCAG00000008259) #8	PDGFRA (ENSSCAG00000008151) #9	GSX2 (ENSSCAG00000008146) #10	CHIC2 (ENSSCAG00000008137) #11	LNX1 (ENSSCAG00000008067) #12	ENSSCAG00000008059	SCFD2 (ENSSCAG00000007948) #14	RASL11B (ENSSCAG00000007937) #15	USP46 (ENSSCAG00000007932) #16	ENSSCAG00000007920 #17	ENSSCAG00000007917	SGCB (ENSSCAG00000007916) #18	ENSSCAG00000007913 #19	DCUN1D4 (ENSSCAG00000007905) #20	CWH43 (ENSSCAG00000007896) #21	OCIAD2 (ENSSCAG00000007887) #22	OCIAD1 (ENSSCAG00000007876) #23	FRYL (ENSSCAG00000007815) #24	SLC10A4 (ENSSCAG00000007792) #26	SLAIN2 (ENSSCAG00000007781) #27	TEC (ENSSCAG00000007764) #28	TXK (ENSSCAG00000007746) #29	NIPAL1 (ENSSCAG00000007741) #30	CNGA1 (ENSSCAG00000007738) #31	NFXL1 (ENSSCAG00000007647) #32	CORIN (ENSSCAG00000007634) #33	ATP10D (ENSSCAG00000007414) #34	COMMD8 (ENSSCAG00000007370) #35	ENSSCAG00000007365	GABRA4 (ENSSCAG00000007358) #37	GABRA2 (ENSSCAG00000007350)
Flycatcher	MODERN SPECIES	22	KIT (ENSFALG00000003481) #8	PDGFRA (ENSFALG00000003428) #9	GSX2 (ENSFALG00000026716) #10	CHIC2 (ENSFALG00000010780) #11	LNX1 (ENSFALG00000003386) #12	ENSFALG00000003360	SCFD2 (ENSFALG00000003345) #14	RASL11B (ENSFALG00000028359) #15	USP46 (ENSFALG00000003314) #16	ENSFALG00000003298 #17	SGCB (ENSFALG00000003287) #18	DCUN1D4 (ENSFALG00000003259) #20	ENSFALG00000028702 #19	CWH43 (ENSFALG00000003237) #21	OCIAD1 (ENSFALG00000027572) #23	OCIAD2 (ENSFALG00000027775) #22	FRYL (ENSFALG00000003186) #24	ZAR1 (ENSFALG00000026000) #25	SLC10A4 (ENSFALG00000003162) #26	SLAIN2 (ENSFALG00000003145) #27	TEC (ENSFALG00000003111) #28	TXK (ENSFALG00000026995) #29	NIPAL1 (ENSFALG00000003084) #30	CNGA1 (ENSFALG00000003076) #31	NFXL1 (ENSFALG00000003060) #32	CORIN (ENSFALG00000003050) #33	ATP10D (ENSFALG00000003019) #34	COMMD8 (ENSFALG00000003000) #35	ENSFALG00000002986	GABRA4 (ENSFALG00000002976) #37	GABRA2 (ENSFALG00000002972)
Galloanserae	ANCESTRAL SPECIES	5	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Anatidae	ANCESTRAL SPECIES	2	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000159024 #37
Duck	MODERN SPECIES	22	SRD5A3 (ENSAPLG00000007156)	KDR (ENSAPLG00000005535) #7	KIT (ENSAPLG00000004054) #8	PDGFRA (ENSAPLG00000003497) #9	CHIC2 (ENSAPLG00000022741) #11	LNX1 (ENSAPLG00000003420) #12	ENSAPLG00000003042	SCFD2 (ENSAPLG00000022972) #14	RASL11B (ENSAPLG00000002875) #15	USP46 (ENSAPLG00000003005) #16	SPATA18 (ENSAPLG00000003130) #17	SGCB (ENSAPLG00000003393) #18	ENSAPLG00000024904 #19	DCUN1D4 (ENSAPLG00000003414) #20	CWH43 (ENSAPLG00000003773) #21	OCIAD2 (ENSAPLG00000026944) #22	OCIAD1 (ENSAPLG00000027836) #23	FRYL (ENSAPLG00000004113) #24	ZAR1 (ENSAPLG00000020654) #25	SLC10A4 (ENSAPLG00000001667) #26	SLAIN2 (ENSAPLG00000005671) #27	TEC (ENSAPLG00000009593) #28	TXK (ENSAPLG00000010285) #29	NIPAL1 (ENSAPLG00000026168) #30	CNGA1 (ENSAPLG00000010470) #31	CORIN (ENSAPLG00000010874) #33	NFXL1 (ENSAPLG00000010735) #32	ATP10D (ENSAPLG00000011330) #34	COMMD8 (ENSAPLG00000011707) #35	ENSAPLG00000021812	ENSAPLG00000011813
African ostrich	MODERN SPECIES	856			GSX2 (ENSSCUG00000018300) #10	CHIC2 (ENSSCUG00000018301) #11	ENSSCUG00000018304 #12	ENSSCUG00000018305 #12	ENSSCUG00000018306 #13	SCFD2 (ENSSCUG00000018310) #14	RASL11B (ENSSCUG00000018316) #15	USP46 (ENSSCUG00000018319) #16	SPATA18 (ENSSCUG00000018323) #17	SGCB (ENSSCUG00000018326) #18	ENSSCUG00000018327 #19	DCUN1D4 (ENSSCUG00000018328) #20	CWH43 (ENSSCUG00000018330) #21	OCIAD2 (ENSSCUG00000018332) #22	OCIAD1 (ENSSCUG00000018333) #23	FRYL (ENSSCUG00000018539) #24	SLAIN2 (ENSSCUG00000018723) #27	TEC (ENSSCUG00000018724) #28	TXK (ENSSCUG00000018725) #29	NIPAL1 (ENSSCUG00000018726) #30	CNGA1 (ENSSCUG00000018727) #31	NFXL1 (ENSSCUG00000018729) #32	CORIN (ENSSCUG00000018731) #33	ATP10D (ENSSCUG00000018732) #34	COMMD8 (ENSSCUG00000018735) #35	ENSSCUG00000018737	GABRA4 (ENSSCUG00000018739) #37	GABRA2 (ENSSCUG00000018740)	ENSSCUG00000018741
Lepidosauria	ANCESTRAL SPECIES	9	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532.q #17	ENSGT00960000189468	ENSGT00390000013532.r #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160857 #29	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00390000018141.bb	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34
Episquamata	ANCESTRAL SPECIES	3	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532.q #17	ENSGT00960000189468	ENSGT00390000013532.r #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00390000018141.bb	ENSGT01100000263481	ENSGT00940000162286.a.a	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35
Laterata	ANCESTRAL SPECIES	21	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT01080000257472	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532.q #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00510000048509 #21	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b.r #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00390000018141.bb	ENSGT01100000263481	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154245.B #36
Common wall lizard	MODERN SPECIES	17	RFC1 (ENSPMRG00000013977)	KLB (ENSPMRG00000013996)	ENSPMRG00000014016	LIAS (ENSPMRG00000014026)	UGDH (ENSPMRG00000014040)	SMIM14 (ENSPMRG00000014058)	UBE2K (ENSPMRG00000014068)	PDS5A (ENSPMRG00000014082)	N4BP2 (ENSPMRG00000014104)	RHOH (ENSPMRG00000014130)	CHRNA9 (ENSPMRG00000009026)	RBM47 (ENSPMRG00000009040)	SGCB (ENSPMRG00000009051) #18	DCUN1D4 (ENSPMRG00000009062) #20	CWH43 (ENSPMRG00000009074) #21	OCIAD2 (ENSPMRG00000009088) #22	OCIAD1 (ENSPMRG00000009093) #23	FRYL (ENSPMRG00000009473) #24	ZAR1 (ENSPMRG00000011637) #25	ENSPMRG00000011646 #26	ENSPMRG00000011653 #26	SLAIN2 (ENSPMRG00000011657) #27	TEC (ENSPMRG00000011722) #28	NIPAL1 (ENSPMRG00000011955) #30	CNGA1 (ENSPMRG00000011962) #31	NFXL1 (ENSPMRG00000011979) #32	ENSPMRG00000012048	CORIN (ENSPMRG00000012049) #33	ATP10D (ENSPMRG00000012061) #34	COMMD8 (ENSPMRG00000012073) #35	ENSPMRG00000012076
Argentine black and white tegu	MODERN SPECIES	1	GABRA4 (ENSSMRG00000003686) #37	GABRB1 (ENSSMRG00000003697) #36	COMMD8 (ENSSMRG00000004239) #35	ATP10D (ENSSMRG00000004241) #34	CORIN (ENSSMRG00000004292) #33	NFXL1 (ENSSMRG00000004304) #32	CNGA1 (ENSSMRG00000004318) #31	ENSSMRG00000004324 #30	ENSSMRG00000004325 #30	TEC (ENSSMRG00000004335) #28	SLAIN2 (ENSSMRG00000004587) #27	ENSSMRG00000004588 #26	ENSSMRG00000004603 #26	ZAR1 (ENSSMRG00000004606) #25	FRYL (ENSSMRG00000004609) #24	ENSSMRG00000004807 #22	OCIAD1 (ENSSMRG00000004814) #23	DCUN1D4 (ENSSMRG00000004820) #20	SGCB (ENSSMRG00000004829) #18	SPATA18 (ENSSMRG00000004846) #17	USP46 (ENSSMRG00000004888) #16	RASL11B (ENSSMRG00000004911) #15	SCFD2 (ENSSMRG00000004955) #14	FIP1L1 (ENSSMRG00000004969)	LNX1 (ENSSMRG00000005012) #12	CHIC2 (ENSSMRG00000005056) #11	GSX2 (ENSSMRG00000005064) #10	PDGFRA (ENSSMRG00000005069) #9	KIT (ENSSMRG00000005119) #8	KDR (ENSSMRG00000005164) #7	SRD5A3 (ENSSMRG00000005180)
Anura	ANCESTRAL SPECIES	2	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.b ##23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00940000155951.b #28	ENSGT00940000160022 #30	ENSGT00940000156074 #31	ENSGT00940000157059 #32	ENSGT00940000157103 #33	ENSGT00940000156728 #34	ENSGT00390000018121 #35	ENSGT00940000154713.B	ENSGT00940000157266	ENSGT00550000074940
Frog	MODERN SPECIES		kdr (ENSXETG00000021061) #7	kit (ENSXETG00000021049) #8	ENSXETG00000047975	ENSXETG00000048091	ENSXETG00000047744	znf84 (ENSXETG00000021035) #9	gsx2 (ENSXETG00000021030) #10	chic2 (ENSXETG00000011681) #11	lnx1 (ENSXETG00000011680) #12	fip1l1 (ENSXETG00000011679)	ENSXETG00000041706	scfd2 (ENSXETG00000011678) #14	rasl11b (ENSXETG00000011677) #15	sgcb (ENSXETG00000011676) #18	ENSXETG00000044544 #19	ociad2 (ENSXETG00000011674) #22	ociad1 (ENSXETG00000011673) ##23	fryl (ENSXETG00000004391) #24	zar1 (ENSXETG00000041194) #25	slc10a4 (ENSXETG00000047027) #26	slain2 (ENSXETG00000009829) #27	dennd1a (ENSXETG00000009831) #28	nipal1 (ENSXETG00000038744) #30	cnga1 (ENSXETG00000009833) #31	nfxl1 (ENSXETG00000009836) #32	rbm42 (ENSXETG00000009837) #33	atp10d (ENSXETG00000009839) #34	commd8 (ENSXETG00000009843) #35	gabrb1 (ENSXETG00000009845)	gabra2 (ENSXETG00000008421)	guf1 (ENSXETG00000008432)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000006587	SCFD2 (ENSLLEG00000006719) #14	ENSLLEG00000006806	ENSLLEG00000006821	ENSLLEG00000006828	RASL11B (ENSLLEG00000006844) #15	ENSLLEG00000006883	ENSLLEG00000006974	SGCB (ENSLLEG00000007000) #18	ENSLLEG00000007092 #17	ENSLLEG00000007195 #17	ENSLLEG00000007269 #19	DCUN1D4 (ENSLLEG00000007342) #20	ENSLLEG00000007709	ENSLLEG00000007718	OCIAD2 (ENSLLEG00000007734) #22	ENSLLEG00000007766 ##23	FRYL (ENSLLEG00000007825) #24	ZAR1 (ENSLLEG00000008045) #25	SLC10A4 (ENSLLEG00000008161) #26	SLAIN2 (ENSLLEG00000008258) #27	TEC (ENSLLEG00000008350) #28	NIPAL1 (ENSLLEG00000008866) #30	ENSLLEG00000008940	CNGA1 (ENSLLEG00000009154) #31	NFXL1 (ENSLLEG00000009241) #32	CORIN (ENSLLEG00000009613) #33	ENSLLEG00000010080	ATP10D (ENSLLEG00000010120) #34	COMMD8 (ENSLLEG00000010299) #35	ENSLLEG00000010418
Coelacanth	MODERN SPECIES	680													SGCB (ENSLACG00000015531) #18	DCUN1D4 (ENSLACG00000015075) #20	CWH43 (ENSLACG00000014726) #21	OCIAD2 (ENSLACG00000014231) #22	ENSLACG00000014161	OCIAD1 (ENSLACG00000014002) #23	FRYL (ENSLACG00000011439) #24	ZAR1 (ENSLACG00000011230) #25	SLAIN2 (ENSLACG00000009763) #27	TEC (ENSLACG00000005869) #28	TXK (ENSLACG00000002886) #29	ENSLACG00000000510 #30
Actinopterygii	ANCESTRAL SPECIES	21	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000161261	ENSGT00940000163955	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.b.a.a #23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460
Neopterygii	ANCESTRAL SPECIES	2	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000163955	ENSGT00940000156043 #10	ENSGT00390000003601.b #11	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460
Osteoglossocephalai	ANCESTRAL SPECIES	156	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.a ##23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460
Osteoglossiformes	ANCESTRAL SPECIES	175												ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00980000203285	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.a ##23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460.a	ENSGT00940000153284.b #16	ENSGT00940000158643 #15	ENSGT00390000011192 #14	ENSGT00940000162578	ENSGT00940000158757 #12
P. kingsleyae	MODERN SPECIES	20	shrprbck1r (ENSPKIG00000006933)	oplah (ENSPKIG00000006711)	foxh1 (ENSPKIG00000006628)	GPT (ENSPKIG00000006566)	ENSPKIG00000006547	ENSPKIG00000006488	ENSPKIG00000006463	CPEB2 (ENSPKIG00000006396)	C1QTNF7 (ENSPKIG00000006363)	CC2D2A (ENSPKIG00000006303)	fbxl5 (ENSPKIG00000006259)	ENSPKIG00000005063	spata18 (ENSPKIG00000004474) #17	sgcb (ENSPKIG00000004440) #18	dcun1d4 (ENSPKIG00000004419) #20	ociad2 (ENSPKIG00000004397) #22	ENSPKIG00000004311 ##23	fryl (ENSPKIG00000004222) #24	zar1 (ENSPKIG00000004141) #25	SLC10A4 (ENSPKIG00000004106) #26	slain2 (ENSPKIG00000004084) #27	anapc4 (ENSPKIG00000004047)	ENSPKIG00000004025	ENSPKIG00000004020	PALLD (ENSPKIG00000003966)	cbr4 (ENSPKIG00000003928)	sh3rf1 (ENSPKIG00000003890)	NEK1 (ENSPKIG00000003655)	usp46 (ENSPKIG00000003550) #16	rasl11b (ENSPKIG00000003511) #15	scfd2 (ENSPKIG00000003465) #14
Asian bonytongue	MODERN SPECIES	24	ENSSFOG00015013762	ENSSFOG00015020265	ENSSFOG00015020245	ENSSFOG00015020156	ENSSFOG00015018614	ENSSFOG00015021707	ENSSFOG00015028335	fbxl5 (ENSSFOG00015018467)	CC2D2A (ENSSFOG00015018346)	C1QTNF7 (ENSSFOG00015018314)	CPEB2 (ENSSFOG00015018275)	spata18 (ENSSFOG00015018236) #17	sgcb (ENSSFOG00015026975) #18	ENSSFOG00015028426	dcun1d4 (ENSSFOG00015018188) #20	ociad2 (ENSSFOG00015018166) #22	ENSSFOG00015018154 ##23	fryl (ENSSFOG00015018034) #24	zar1 (ENSSFOG00015031952) #25	SLC10A4 (ENSSFOG00015031170) #26	slain2 (ENSSFOG00015026091) #27	anapc4 (ENSSFOG00015017880)	PALLD (ENSSFOG00015017783)	cbr4 (ENSSFOG00015017754)	sh3rf1 (ENSSFOG00015017718)	NEK1 (ENSSFOG00015028419)	ENSSFOG00015019906	usp46 (ENSSFOG00015017679) #16	scfd2 (ENSSFOG00015032215) #14	fip1l1b (ENSSFOG00015017653)	lnx1 (ENSSFOG00015017637) #12
Clupeocephala	ANCESTRAL SPECIES	165	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT01030000234788	ENSGT00390000017765.a	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT01100000263516.a.b.a
Otomorpha	ANCESTRAL SPECIES	206	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT01100000263516.a.b.a
Otophysi	ANCESTRAL SPECIES	12	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.a ##23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00940000165355	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000158460
Characiphysae	ANCESTRAL SPECIES	24	ENSGT00390000014886	ENSGT00390000008371.a	ENSGT00390000003574.a	ENSGT00940000154149.b.a.g.b	ENSGT00530000063646.a	ENSGT00940000157620	ENSGT00940000153441.a.a	ENSGT00390000004612	ENSGT00390000017860.b #27	ENSGT00940000165355	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000012305.a #25	ENSGT00610000086058.a #24	ENSGT00530000063690.a.a ##23	ENSGT00390000003601.b.c.b #11	ENSGT00530000063690.a.b.a.b #22	ENSGT00940000156935 #20	ENSGT00390000014817 #19	ENSGT00390000008110 #18	ENSGT00390000013532 #17	ENSGT00940000153284.b #16	ENSGT00940000158643 #15	ENSGT00390000011192 #14	ENSGT00940000162578	ENSGT00940000158757 #12	ENSGT00940000175494	ENSGT00940000156021 #9	ENSGT00940000155626 #8	ENSGT00940000156710 #7	ENSGT00500000044920	ENSGT00390000005261
Channel catfish	MODERN SPECIES	17	gorab (ENSIPUG00000008452)	mettl11b (ENSIPUG00000008461)	KIFAP3 (ENSIPUG00000008497)	niban1a (ENSIPUG00000008779)	c25h12orf57 (ENSIPUG00000008823)	srd5a3 (ENSIPUG00000008842)	TRMT1L (ENSIPUG00000008873)	cbr4 (ENSIPUG00000008908)	PALLD (ENSIPUG00000008999)	anapc4 (ENSIPUG00000009114)	slain2 (ENSIPUG00000009191) #27	lrg1 (ENSIPUG00000009218)	SLC10A4 (ENSIPUG00000009233) #26	zar1 (ENSIPUG00000009252) #25	FRYL (ENSIPUG00000009363) #24	OCIAD2 (ENSIPUG00000009794) #22	dcun1d4 (ENSIPUG00000009816) #20	lrrc66 (ENSIPUG00000009822) #19	SGCB (ENSIPUG00000009827) #18	spata18 (ENSIPUG00000009850) #17	usp46 (ENSIPUG00000009880) #16	rasl11b (ENSIPUG00000009956) #15	Scfd2 (ENSIPUG00000009970) #14	lnx1 (ENSIPUG00000010012) #12	gsx2 (ENSIPUG00000010087) #10	ENSIPUG00000010094	pdgfra (ENSIPUG00000010113) #9	kit (ENSIPUG00000010216) #8	kdr (ENSIPUG00000010273) #7	TMEM165 (ENSIPUG00000010308)	clock (ENSIPUG00000010325)
Characiphysae_b	ANCESTRAL SPECIES	23	ENSGT00390000014886	ENSGT00390000008371.a	ENSGT00390000003574.a	ENSGT00940000154149.b.a.g.b	ENSGT00530000063646.a	ENSGT00940000157620	ENSGT00940000153441.a.a	ENSGT00390000004612	ENSGT00390000017860.b #27	ENSGT00940000165355	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000012305.a #25	ENSGT00610000086058.a #24	ENSGT00530000063690.a.a ##23	ENSGT00390000003601.b.c.b #11	ENSGT00530000063690.a.b.a.b #22	ENSGT00940000156935 #20	ENSGT00390000014817 #19	ENSGT00390000008110 #18	ENSGT00390000013532 #17	ENSGT00940000153284.b #16	ENSGT00940000158643 #15	ENSGT00390000011192 #14	ENSGT00940000162578	ENSGT00940000158757 #12	ENSGT00940000175494	ENSGT00940000156021 #9	ENSGT00940000155626 #8	ENSGT00940000156710 #7	ENSGT00500000044920	ENSGT00390000005261
Characoidei	ANCESTRAL SPECIES	21	ENSGT00390000014886	ENSGT00390000008371.a	ENSGT00390000003574.a	ENSGT00940000154149.b.a.g.b	ENSGT00530000063646.a	ENSGT00940000157620	ENSGT00940000153441.a.a	ENSGT00390000004612	ENSGT00390000017860.b #27	ENSGT00940000165355	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000012305.a #25	ENSGT00610000086058.a #24	ENSGT00530000063690.a.a ##23	ENSGT00390000003601.b.c.b #11	ENSGT00530000063690.a.b.a.b #22	ENSGT00940000156935 #20	ENSGT00390000014817 #19	ENSGT00390000008110 #18	ENSGT00390000013532 #17	ENSGT00940000153284.b #16	ENSGT00940000158643 #15	ENSGT00390000011192 #14	ENSGT00940000162578	ENSGT00940000158757 #12	ENSGT00940000156021 #9	ENSGT00940000155626 #8	ENSGT00940000156710 #7	ENSGT00500000044920	ENSGT00390000005261	ENSGT00940000157580.a.a
Mexicana tetra	MODERN SPECIES	18	ENSAMXG00000030767	ENSAMXG00000002407	ENSAMXG00000002421	ttr (ENSAMXG00000002423)	b4galt6 (ENSAMXG00000002432)	opn7a (ENSAMXG00000040803)	TRAPPC8 (ENSAMXG00000002438)	anapc4 (ENSAMXG00000002444)	slain2 (ENSAMXG00000002454) #27	ENSAMXG00000002464	ENSAMXG00000002468 #26	SLC10A4 (ENSAMXG00000030076) #26	zar1 (ENSAMXG00000030044) #25	fryl (ENSAMXG00000002511) #24	ociad1 (ENSAMXG00000035482) ##23	ociad2 (ENSAMXG00000040066) #22	dcun1d4 (ENSAMXG00000002575) #20	ENSAMXG00000038151 #19	sgcb (ENSAMXG00000002583) #18	spata18 (ENSAMXG00000040413) #17	usp46 (ENSAMXG00000002600) #16	rasl11b (ENSAMXG00000042814) #15	scfd2 (ENSAMXG00000002603) #14	ENSAMXG00000033362	ENSAMXG00000031045	lnx1 (ENSAMXG00000002610) #12	gsx2 (ENSAMXG00000041308) #10	ENSAMXG00000036677	pdgfra (ENSAMXG00000002629) #9	kita (ENSAMXG00000002687) #8	kdr (ENSAMXG00000043598) #7
Red-bellied piranha	MODERN SPECIES	13						cbr4 (ENSPNAG00000010608)	PALLD (ENSPNAG00000010591)	anapc4 (ENSPNAG00000010526)	slain2 (ENSPNAG00000010380) #27	ENSPNAG00000010343	SLC10A4 (ENSPNAG00000010338) #26	zar1 (ENSPNAG00000010311) #25	ENSPNAG00000010279 #24	fryl (ENSPNAG00000001380) #24	ociad1 (ENSPNAG00000010095) ##23	ociad2 (ENSPNAG00000010069) #22	dcun1d4 (ENSPNAG00000010034) #20	ENSPNAG00000009987 #19	sgcb (ENSPNAG00000009982) #18	spata18 (ENSPNAG00000005012) #17	usp46 (ENSPNAG00000009931) #16	rasl11b (ENSPNAG00000001348) #15	scfd2 (ENSPNAG00000009871) #14	ENSPNAG00000009853	lnx1 (ENSPNAG00000009829) #12	gsx2 (ENSPNAG00000009791) #10	ENSPNAG00000009786	pdgfra (ENSPNAG00000006989) #9	kita (ENSPNAG00000009655) #8	kdr (ENSPNAG00000009632) #7	srd5a3 (ENSPNAG00000009614)
Electric eel	MODERN SPECIES	427							ENSEEEG00000020682	anapc4 (ENSEEEG00000020673)	ENSEEEG00000020671 #27	slain2 (ENSEEEG00000020670) #27	ENSEEEG00000020667	SLC10A4 (ENSEEEG00000020666) #26	zar1 (ENSEEEG00000020665) #25	fryl (ENSEEEG00000019114) #24	ociad1 (ENSEEEG00000019012) ##23	ENSEEEG00000019010 #22	dcun1d4 (ENSEEEG00000018982) #20	ENSEEEG00000018974	sgcb (ENSEEEG00000018973) #18	spata18 (ENSEEEG00000018971) #17	usp46 (ENSEEEG00000018968) #16	rasl11b (ENSEEEG00000018963) #15	scfd2 (ENSEEEG00000018961) #14	lnx1 (ENSEEEG00000018958) #12
Cyprinoidei	ANCESTRAL SPECIES	11	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00980000203285	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.a ##23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00940000165355	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000158460	ENSGT00940000156933.c.c	ENSGT00390000008373	ENSGT00940000156638	ENSGT00550000074802	ENSGT00620000088063
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	101	ENSGT00940000155626.ld.a.a #8	ENSGT00940000156021.h.b #9	ENSGT00940000175494	ENSGT00940000156043.ic #10	ENSGT00940000158757.i #12	ENSGT00940000162578.sc.b.b	ENSGT00390000011192.wb #14	ENSGT00940000158643.d #15	ENSGT00940000153284.b.w.b #16	ENSGT00940000153284.b.w.a #16	ENSGT00390000013532 #17	ENSGT00390000008110.d #18	ENSGT00940000156935.o.a.a #20	ENSGT00390000014817 #19	ENSGT00940000156935.p #20	ENSGT00530000063690.a.b.a.b.k #22	ENSGT00940000153284.b.x #16	ENSGT00390000008110.c #18	ENSGT00980000203285	ENSGT00940000156935.o.b #20	ENSGT00530000063690.a.b.a.b.l #22	ENSGT00530000063690.a.a.t ##23	ENSGT00610000086058.a.gb.b #24	ENSGT00390000012305.a.e #25	ENSGT00950000182808.a.a.b.b.m #26	ENSGT00940000165355	ENSGT00390000017860.b.c #27	ENSGT00390000004612.f	ENSGT00610000086058.a.gb.a #24	ENSGT00390000012305.a.f #25	ENSGT00950000182808.a.a.b.b.n #26
Cyprininae_a	ANCESTRAL SPECIES	34	ENSGT00940000156710.z.b #7	ENSGT00940000155626.ld.a.a #8	ENSGT00940000156021.h.b #9	ENSGT00940000175494	ENSGT00940000156043.ic #10	ENSGT00940000158757.i #12	ENSGT00940000162578.sc.b.b	ENSGT00390000011192.wb #14	ENSGT00940000158643.d #15	ENSGT00940000153284.b.w.b #16	ENSGT00940000153284.b.w.a #16	ENSGT00390000013532 #17	ENSGT00390000008110.d #18	ENSGT00390000014817 #19	ENSGT00940000156935.p #20	ENSGT00530000063690.a.b.a.b.k #22	ENSGT00530000063690.a.a.t.c.a ##23	ENSGT00610000086058.a.gb.b #24	ENSGT00390000012305.a.e #25	ENSGT00950000182808.a.a.b.b.m #26	ENSGT00940000165355	ENSGT00390000017860.b.c #27	ENSGT00390000004612.f	ENSGT00940000153441.a.a.ob.a	ENSGT00940000157620.a	ENSGT00940000158460	ENSGT00940000155875.l.b	ENSGT00940000156933.c.c.b	ENSGT00390000008373.f	ENSGT00940000156638.`b	ENSGT00550000074802
Golden-line barbel	MODERN SPECIES	231		kita (ENSSGRG00000038098) #8	pdgfra (ENSSGRG00000038102) #9	ENSSGRG00000038110	gsx2 (ENSSGRG00000038111) #10	gsx2 (ENSSGRG00000038113) #10	lnx1 (ENSSGRG00000038114) #12	ENSSGRG00000038120	SCFD2 (ENSSGRG00000038122) #14	rasl11b (ENSSGRG00000038134) #15	usp46 (ENSSGRG00000038140) #16	spata18 (ENSSGRG00000038720) #17	sgcb (ENSSGRG00000038722) #18	ENSSGRG00000038723	dcun1d4 (ENSSGRG00000038726) #20	ociad2 (ENSSGRG00000038730) #22	ociad1 (ENSSGRG00000038731) ##23	fryl (ENSSGRG00000038743) #24	zar1 (ENSSGRG00000038759) #25	SLC10A4 (ENSSGRG00000038762) #26	si:dkey-90m5.4 (ENSSGRG00000038763)	slain2 (ENSSGRG00000038776) #27	anapc4 (ENSSGRG00000038893)	PALLD (ENSSGRG00000038898)	cbr4 (ENSSGRG00000038904)	sh3rf1 (ENSSGRG00000038978)	tnfa (ENSSGRG00000039026)	ginm1 (ENSSGRG00000039028)	katna1 (ENSSGRG00000039030)	casp8ap2 (ENSSGRG00000039189)	GJA10 (ENSSGRG00000039191)
Common carp reference	MODERN SPECIES	28	nmu (ENSCCRG00000015667)	clocka (ENSCCRG00000023096)	tmem165 (ENSCCRG00000003531)	kdr (ENSCCRG00000033392) #7	srd5a3 (ENSCCRG00000003520)	kita (ENSCCRG00000031619) #8	pdgfra (ENSCCRG00000033797) #9	gsx2 (ENSCCRG00000072413) #10	lnx1 (ENSCCRG00000016556) #12	ENSCCRG00000039407	SCFD2 (ENSCCRG00000039417) #14	rasl11b (ENSCCRG00000065537) #15	usp46 (ENSCCRG00000070413) #16	ENSCCRG00000072074 #19	dcun1d4 (ENSCCRG00000008818) #20	ociad2 (ENSCCRG00000076431) #22	ociad1 (ENSCCRG00000042678) ##23	fryl (ENSCCRG00000033884) #24	zar1 (ENSCCRG00000033869) #25	SLC10A4 (ENSCCRG00000062621) #26	si:dkey-90m5.4 (ENSCCRG00000033865)	slain2 (ENSCCRG00000033859) #27	anapc4 (ENSCCRG00000030776)	ENSCCRG00000051209	cbr4 (ENSCCRG00000061232)	ENSCCRG00000051206	ENSCCRG00000082041	sh3rf1 (ENSCCRG00000003515)	ENSCCRG00000003692	ENSCCRG00000003544	ginm1 (ENSCCRG00000054912)
Goldfish	MODERN SPECIES	39	clocka (ENSCARG00000019991)	tmem165 (ENSCARG00000019914)	srd5a3 (ENSCARG00000019904)	kdr (ENSCARG00000019566) #7	kita (ENSCARG00000017223) #8	pdgfra (ENSCARG00000016648) #9	gsx2 (ENSCARG00000016582) #10	lnx1 (ENSCARG00000016553) #12	ENSCARG00000016514	SCFD2 (ENSCARG00000016491) #14	rasl11b (ENSCARG00000016476) #15	ENSCARG00000016472	usp46 (ENSCARG00000016391) #16	sgcb (ENSCARG00000016371) #18	dcun1d4 (ENSCARG00000016357) #20	ociad2 (ENSCARG00000016348) #22	ENSCARG00000016334	fryl (ENSCARG00000015858) #24	ccm2 (ENSCARG00000015784)	fam167ab (ENSCARG00000015775)	enpp5 (ENSCARG00000015770)	eif5 (ENSCARG00000015740)	zar1 (ENSCARG00000015732) #25	SLC10A4 (ENSCARG00000015725) #26	SLC10A4 (ENSCARG00000015719) #26	slain2 (ENSCARG00000015695) #27	tdh (ENSCARG00000015681)	pinx1 (ENSCARG00000015676)	sox7 (ENSCARG00000015672)	dab1a (ENSCARG00000015668)	PRKAA2 (ENSCARG00000015659)
Cyprininae	ANCESTRAL SPECIES	101	ENSGT00940000162578.sc.b.b	ENSGT00390000011192.wb #14	ENSGT00940000158643.d #15	ENSGT00940000153284.b.w.b #16	ENSGT00940000153284.b.w.a #16	ENSGT00390000013532 #17	ENSGT00390000008110.d #18	ENSGT00940000156935.o.a.a #20	ENSGT00390000014817 #19	ENSGT00940000156935.p #20	ENSGT00530000063690.a.b.a.b.k #22	ENSGT00940000153284.b.x #16	ENSGT00390000008110.c #18	ENSGT00980000203285	ENSGT00940000156935.o.b #20	ENSGT00530000063690.a.b.a.b.l #22	ENSGT00530000063690.a.a.t ##23	ENSGT00610000086058.a.gb.b #24	ENSGT00390000012305.a.e #25	ENSGT00950000182808.a.a.b.b.m #26	ENSGT00940000165355	ENSGT00390000017860.b.c #27	ENSGT00390000004612.f	ENSGT00610000086058.a.gb.a #24	ENSGT00390000012305.a.f #25	ENSGT00950000182808.a.a.b.b.n #26	ENSGT00940000159375.d	ENSGT00390000017860.b.d #27	ENSGT00390000004612.e	ENSGT00940000153441.a.a.ob.b
Goldfish	MODERN SPECIES	12	ENSCARG00000003877 #24	zar1 (ENSCARG00000003852) #25	SLC10A4 (ENSCARG00000003826) #26	ENSCARG00000003812	ENSCARG00000003794	map3k7 (ENSCARG00000003710)	lnx1 (ENSCARG00000053128) #12	ENSCARG00000053102	SCFD2 (ENSCARG00000053067) #14	rasl11b (ENSCARG00000053044) #15	usp46 (ENSCARG00000052907) #16	spata18 (ENSCARG00000052868) #17	sgcb (ENSCARG00000052785) #18	ENSCARG00000052740	dcun1d4 (ENSCARG00000052659) #20	ociad2 (ENSCARG00000052643) #22	ociad1 (ENSCARG00000052634) ##23	fryl (ENSCARG00000052352) #24	esr2a (ENSCARG00000052187)	ENSCARG00000052145	ENSCARG00000052095	L3HYPDH (ENSCARG00000052080)	daam1b (ENSCARG00000051851)	nmu (ENSCARG00000051614)	clocka (ENSCARG00000050592)	tmem165 (ENSCARG00000050481)	kdr (ENSCARG00000050175) #7	kita (ENSCARG00000049128) #8	pdgfra (ENSCARG00000045218) #9	gsx2 (ENSCARG00000044940) #10	epha7 (ENSCARG00000044897)
Cyprininae_a	ANCESTRAL SPECIES	407	ENSGT00940000157580.a.a.a	ENSGT00390000005261.c.b	ENSGT00500000044920.d	ENSGT00940000156710.z.a #7	ENSGT00940000155626.ld.a.b #8	ENSGT00940000156021.h.a #9	ENSGT00940000156043.hc #10	ENSGT00940000158757.j #12	ENSGT00940000162578.sc.b.a	ENSGT00390000011192.vb.a #14	ENSGT00940000158643.c #15	ENSGT00940000153284.b.x #16	ENSGT00390000008110.c #18	ENSGT00980000203285	ENSGT00940000156935.o.b #20	ENSGT00530000063690.a.b.a.b.l #22	ENSGT00530000063690.a.a.t.c.b ##23
Common carp reference	MODERN SPECIES	34	tmem165 (ENSCCRG00000064973)	srd5a3 (ENSCCRG00000022915)	kdr (ENSCCRG00000022891) #7	kita (ENSCCRG00000038896) #8	pdgfra (ENSCCRG00000037125) #9	gsx2 (ENSCCRG00000038849) #10	lnx1 (ENSCCRG00000008890) #12	ENSCCRG00000064573	rasl11b (ENSCCRG00000005928) #15	SCFD2 (ENSCCRG00000017641) #14	usp46 (ENSCCRG00000034058) #16	spata18 (ENSCCRG00000034049) #17	sgcb (ENSCCRG00000077383) #18	ENSCCRG00000034033	dcun1d4 (ENSCCRG00000034028) #20	ociad2 (ENSCCRG00000034017) #22	ociad1 (ENSCCRG00000079949) ##23	fryl (ENSCCRG00000033998) #24	zar1 (ENSCCRG00000052868) #25	SLC10A4 (ENSCCRG00000053158) #26	ENSCCRG00000030662	slain2 (ENSCCRG00000030298) #27	anapc4 (ENSCCRG00000030267)	ENSCCRG00000031871	cbr4 (ENSCCRG00000064012)	ENSCCRG00000072123	sh3rf1 (ENSCCRG00000057790)	ENSCCRG00000003533	ENSCCRG00000060644	ginm1 (ENSCCRG00000003564)	katna1 (ENSCCRG00000061290)
Zebrafish	MODERN SPECIES	12	kdr (ENSDARG00000017321) #7	kita (ENSDARG00000043317) #8	pdgfra (ENSDARG00000070494) #9	gsx2 (ENSDARG00000043322) #10	lnx1 (ENSDARG00000043323) #12	ENSDARG00000043328	scfd2 (ENSDARG00000040005) #14	ENSDARG00000115492 #14	ENSDARG00000093336 #14	rasl11b (ENSDARG00000015611) #15	usp46 (ENSDARG00000045343) #16	spata18 (ENSDARG00000052343) #17	sgcb (ENSDARG00000052341) #18	ENSDARG00000093370	dcun1d4 (ENSDARG00000092394) #20	ociad2 (ENSDARG00000052336) #22	ociad1 (ENSDARG00000052334) ##23	fryl (ENSDARG00000040001) #24	zar1 (ENSDARG00000019706) #25	slc10a4 (ENSDARG00000009131) #26	si:dkey-90m5.4 (ENSDARG00000029388)	slain2 (ENSDARG00000032114) #27	anapc4 (ENSDARG00000032237)	PALLD (ENSDARG00000040009)	cbr4 (ENSDARG00000009074)	ENSDARG00000090836	ENSDARG00000022350	sh3rf1 (ENSDARG00000070470)	si:dkey-15j16.3 (ENSDARG00000042683)	ENSDARG00000042698	ginm1 (ENSDARG00000021975)
Clupeiformes	ANCESTRAL SPECIES	9	ENSGT00940000157580.a.a	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	18	ENSDCDG00000032157	ENSDCDG00000021061	ENSDCDG00000020796	SHISA6 (ENSDCDG00000020791)	ENSDCDG00000020787	ENSDCDG00000020786	ENSDCDG00000020785	ENSDCDG00000020783	ENSDCDG00000019541	dhrs7cb (ENSDCDG00000019458)	hs3st3l (ENSDCDG00000019455)	ENSDCDG00000019452	ENSDCDG00000018943	rcvrnb (ENSDCDG00000018925)	PTS (ENSDCDG00000018924)	ENSDCDG00000018914 #22	ENSDCDG00000017499	adprm (ENSDCDG00000017443)	map2k4b (ENSDCDG00000017363)	ENSDCDG00000017356	ENSDCDG00000017342	ENSDCDG00000017337	ENSDCDG00000017331	rac1a (ENSDCDG00000017323)	crym (ENSDCDG00000017288)	ENSDCDG00000017281	ENSDCDG00000017278	uqcrc2b (ENSDCDG00000017066)	mosmob (ENSDCDG00000017054)	eef2k (ENSDCDG00000017014)	polr3e (ENSDCDG00000016985)
Denticle herring	MODERN SPECIES	57									dhrs7cb (ENSDCDG00000018841)	hs3st3l (ENSDCDG00000018835)	ENSDCDG00000018833	ENSDCDG00000018831	rcvrnb (ENSDCDG00000018829)	PTS (ENSDCDG00000018828)	ENSDCDG00000018823	ENSDCDG00000018817 #22	ENSDCDG00000018816
Atlantic herring	MODERN SPECIES	1	kdr (ENSCHAG00000010465) #7	clocka (ENSCHAG00000007302)	kita (ENSCHAG00000006618) #8	pdgfra (ENSCHAG00000001576) #9	ENSCHAG00000001249	gsx2 (ENSCHAG00000001217) #10	lnx1 (ENSCHAG00000001104) #12	ENSCHAG00000001041	scfd2 (ENSCHAG00000000822) #14	rasl11b (ENSCHAG00000000664) #15	usp46 (ENSCHAG00000025013) #16	spata18 (ENSCHAG00000025006) #17	sgcb (ENSCHAG00000024997) #18	ENSCHAG00000024991 #19	dcun1d4 (ENSCHAG00000024952) #20	ociad2 (ENSCHAG00000024945) #22	ociad1 (ENSCHAG00000024930) ##23	fryl (ENSCHAG00000023473) #24	zar1 (ENSCHAG00000023410) #25	SLC10A4 (ENSCHAG00000023407) #26	ENSCHAG00000023399	ENSCHAG00000023390	slain2 (ENSCHAG00000023374) #27	anapc4 (ENSCHAG00000023313)	PALLD (ENSCHAG00000023299)	cbr4 (ENSCHAG00000023283)	NEK1 (ENSCHAG00000023205)	ENSCHAG00000023198	cyp2n13 (ENSCHAG00000023056)	cyp2ad2 (ENSCHAG00000022999)	ENSCHAG00000022879
Euteleosteomorpha	ANCESTRAL SPECIES	23	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT01030000234788	ENSGT00390000017765.a	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Acanthomorphata	ANCESTRAL SPECIES	21	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	9	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Percomorphaceae	ANCESTRAL SPECIES	12	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Tiger tail seahorse	MODERN SPECIES	469	clocka (ENSHCOG00000015967)	tmem165 (ENSHCOG00000015910)	srd5a3 (ENSHCOG00000015899)	kdr (ENSHCOG00000015875) #7	ENSHCOG00000015807 #8	pdgfra (ENSHCOG00000015380) #9	gsx2 (ENSHCOG00000015334) #10	lnx1 (ENSHCOG00000015309) #12	scfd2 (ENSHCOG00000015269) #14	rasl11b (ENSHCOG00000015260) #15	usp46 (ENSHCOG00000015254) #16	ENSHCOG00000015224	spata18 (ENSHCOG00000015207) #17	sgcb (ENSHCOG00000015143) #18	dcun1d4 (ENSHCOG00000015127) #20	ociad2 (ENSHCOG00000015099) #22	fryl (ENSHCOG00000015075) #24	fryl (ENSHCOG00000014981) #24	zar1 (ENSHCOG00000014941) #25	SLC10A4 (ENSHCOG00000014933) #26	slain2 (ENSHCOG00000014917) #27	ENSHCOG00000014891	ENSHCOG00000014887	ENSHCOG00000014881	ENSHCOG00000014874	ENSHCOG00000014861	ENSHCOG00000014855	ENSHCOG00000014850	hdlbpa (ENSHCOG00000014837)	ENSHCOG00000014788	ENSHCOG00000014764
Percomorphaceae_B	ANCESTRAL SPECIES	9	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357
Percomorphaceae_C	ANCESTRAL SPECIES	8	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357
Eupercaria	ANCESTRAL SPECIES	8	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357
Tetraodontidae	ANCESTRAL SPECIES	27	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482.h	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Tetraodon	MODERN SPECIES		ENSTNIG00000000636	tmem165 (ENSTNIG00000017653)	clocka (ENSTNIG00000017652)	srd5a3 (ENSTNIG00000017654)	kdr (ENSTNIG00000017655) #7	ENSTNIG00000017656 #8	pdgfra (ENSTNIG00000017657) #9	gsx2 (ENSTNIG00000017658) #10	lnx1 (ENSTNIG00000017659) #12	scfd2 (ENSTNIG00000017660) #14	rasl11b (ENSTNIG00000017661) #15	usp46 (ENSTNIG00000017662) #16	spata18 (ENSTNIG00000017663) #17	sgcb (ENSTNIG00000017664) #18	dcun1d4 (ENSTNIG00000017665) #20	ociad2 (ENSTNIG00000001106) #22	fryl (ENSTNIG00000017666) #24	zar1 (ENSTNIG00000017667) #25	SLC10A4 (ENSTNIG00000017668) #26	slain2 (ENSTNIG00000017669) #27	anapc4 (ENSTNIG00000017670)	PALLD (ENSTNIG00000017671)	cbr4 (ENSTNIG00000017672)	sh3rf1 (ENSTNIG00000017673)	NEK1 (ENSTNIG00000017674)	fbxl5 (ENSTNIG00000017675)	CC2D2A (ENSTNIG00000017676)	C1QTNF7 (ENSTNIG00000017677)	CPEB2 (ENSTNIG00000017678)	ndnf (ENSTNIG00000005902)	prdm5 (ENSTNIG00000005901)
Fugu	MODERN SPECIES	12	srd5a3 (ENSTRUG00000020286)	kdr (ENSTRUG00000015383) #7	ENSTRUG00000015193 #8	pdgfra (ENSTRUG00000015076) #9	gsx2 (ENSTRUG00000015060) #10	lnx1 (ENSTRUG00000014995) #12	ENSTRUG00000031012	scfd2 (ENSTRUG00000014970) #14	rasl11b (ENSTRUG00000021970) #15	ENSTRUG00000027153	usp46 (ENSTRUG00000014912) #16	sgcb (ENSTRUG00000014878) #18	spata18 (ENSTRUG00000014899) #17	ENSTRUG00000033037 #19	dcun1d4 (ENSTRUG00000014849) #20	ociad2 (ENSTRUG00000022946) #22	fryl (ENSTRUG00000024952) #24	zar1 (ENSTRUG00000020011) #25	SLC10A4 (ENSTRUG00000014657) #26	anapc4 (ENSTRUG00000014626)	PALLD (ENSTRUG00000014392)	cbr4 (ENSTRUG00000014365)	sh3rf1 (ENSTRUG00000014310)	NEK1 (ENSTRUG00000014162)	ENSTRUG00000031868	fbxl5 (ENSTRUG00000014096)	C1QTNF7 (ENSTRUG00000014007)	CPEB2 (ENSTRUG00000022887)	ndnf (ENSTRUG00000013940)	prdm5 (ENSTRUG00000013850)	ENSTRUG00000013725
Eupecaria_A	ANCESTRAL SPECIES	11	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Eupecaria_B	ANCESTRAL SPECIES	10	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Eupecaria_C	ANCESTRAL SPECIES	4	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	3	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b	ENSGT00940000158340
European seabass	MODERN SPECIES	17	clocka (ENSDLAG00005012393)	tmem165 (ENSDLAG00005029939)	srd5a3 (ENSDLAG00005031727)	kdr (ENSDLAG00005012762) #7	ENSDLAG00005013194 #8	pdgfra (ENSDLAG00005013835) #9	gsx2 (ENSDLAG00005029442) #10	lnx1 (ENSDLAG00005015045) #12	ENSDLAG00005026603 #13	scfd2 (ENSDLAG00005015123) #14	rasl11b (ENSDLAG00005031620) #15	usp46 (ENSDLAG00005015238) #16	spata18 (ENSDLAG00005015274) #17	sgcb (ENSDLAG00005027765) #18	dcun1d4 (ENSDLAG00005033853) #20	ociad2 (ENSDLAG00005029470) #22	fryl (ENSDLAG00005015397) #24	SLC10A4 (ENSDLAG00005007479) #26	slain2 (ENSDLAG00005027601) #27	anapc4 (ENSDLAG00005007507)	PALLD (ENSDLAG00005007614)	cbr4 (ENSDLAG00005008237)	SH3RF1 (ENSDLAG00005008256)	NEK1 (ENSDLAG00005028775)	NEK1 (ENSDLAG00005034737)	FBXL5 (ENSDLAG00005008511)	CC2D2A (ENSDLAG00005008561)	C1QTNF7 (ENSDLAG00005008816)	CPEB2 (ENSDLAG00005008843)	ndnf (ENSDLAG00005009239)	prdm5 (ENSDLAG00005009250)
Large yellow croaker	MODERN SPECIES	489	tmem165 (ENSLCRG00005013576)	srd5a3 (ENSLCRG00005013579)	kdr (ENSLCRG00005013596) #7	ENSLCRG00005015456 #8	pdgfra (ENSLCRG00005015728) #9	gsx2 (ENSLCRG00005015875) #10	lnx1 (ENSLCRG00005015879) #12	scfd2 (ENSLCRG00005015885) #14	rasl11b (ENSLCRG00005015887) #15	usp46 (ENSLCRG00005015888) #16	usp46 (ENSLCRG00005015890) #16	spata18 (ENSLCRG00005015892) #17	sgcb (ENSLCRG00005015901) #18	ENSLCRG00005015902 #19	dcun1d4 (ENSLCRG00005015903) #20	ociad2 (ENSLCRG00005015906) #22	fryl (ENSLCRG00005015909) #24	zar1 (ENSLCRG00005016132) #25	SLC10A4 (ENSLCRG00005016133) #26	slain2 (ENSLCRG00005016134) #27	anapc4 (ENSLCRG00005016142)	PALLD (ENSLCRG00005016345)	cbr4 (ENSLCRG00005016605)	sh3rf1 (ENSLCRG00005016607)	NEK1 (ENSLCRG00005016613)	fbxl5 (ENSLCRG00005016780)	CC2D2A (ENSLCRG00005016798)	C1QTNF7 (ENSLCRG00005016802)	CPEB2 (ENSLCRG00005016806)	ndnf (ENSLCRG00005016848)	prdm5 (ENSLCRG00005016849)
Gilthead seabream	MODERN SPECIES	2	tmem165 (ENSSAUG00010001335)	srd5a3 (ENSSAUG00010001331)	kdr (ENSSAUG00010024898) #7	ENSSAUG00010024844 #8	pdgfra (ENSSAUG00010024687) #9	gsx2 (ENSSAUG00010024685) #10	lnx1 (ENSSAUG00010024684) #12	ENSSAUG00010024682 #13	scfd2 (ENSSAUG00010024662) #14	rasl11b (ENSSAUG00010024650) #15	ENSSAUG00010024639	usp46 (ENSSAUG00010024606) #16	spata18 (ENSSAUG00010024599) #17	sgcb (ENSSAUG00010024598) #18	dcun1d4 (ENSSAUG00010024596) #20	ociad2 (ENSSAUG00010024595) #22	fryl (ENSSAUG00010016788) #24	zar1 (ENSSAUG00010016671) #25	SLC10A4 (ENSSAUG00010016668) #26	slain2 (ENSSAUG00010016664) #27	anapc4 (ENSSAUG00010016513)	PALLD (ENSSAUG00010016266)	cbr4 (ENSSAUG00010016261)	sh3rf1 (ENSSAUG00010016212)	NEK1 (ENSSAUG00010016170)	fbxl5 (ENSSAUG00010016165)	CC2D2A (ENSSAUG00010016064)	ENSSAUG00010016047	C1QTNF7 (ENSSAUG00010016044)	CPEB2 (ENSSAUG00010015982)	ndnf (ENSSAUG00010015963)
Perciformes	ANCESTRAL SPECIES	8	ENSGT00940000176973	ENSGT00940000157580.a.a	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626.b #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b	ENSGT00940000158340
Perciformes_a	ANCESTRAL SPECIES	6	ENSGT00940000176973	ENSGT00940000157580.a.a	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626.b #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b	ENSGT00940000158340
Channel bull blenny	MODERN SPECIES	18	clocka (ENSCGOG00000023370)	tmem165 (ENSCGOG00000023290)	srd5a3 (ENSCGOG00000023287)	kdr (ENSCGOG00000023197) #7	ENSCGOG00000023192	ENSCGOG00000023191 #8	pdgfra (ENSCGOG00000023117) #9	gsx2 (ENSCGOG00000023110) #10	lnx1 (ENSCGOG00000023107) #12	scfd2 (ENSCGOG00000023069) #14	rasl11b (ENSCGOG00000023066) #15	usp46 (ENSCGOG00000022939) #16	spata18 (ENSCGOG00000022931) #17	sgcb (ENSCGOG00000022930) #18	dcun1d4 (ENSCGOG00000022900) #20	ociad2 (ENSCGOG00000022889) #22	zgc:153738 (ENSCGOG00000022879)	ENSCGOG00000022876	ENSCGOG00000022874	nexn (ENSCGOG00000022862)	tab3 (ENSCGOG00000022855)	tmem47 (ENSCGOG00000022852)	prrg1 (ENSCGOG00000022851)	cpox (ENSCGOG00000022837)	ENSCGOG00000022834	P3H2 (ENSCGOG00000022639)	ENSCGOG00000022625	ENSCGOG00000022623	ENSCGOG00000022620	ENSCGOG00000022610	PEX5L (ENSCGOG00000022592)
Ballan wrasse	MODERN SPECIES	883												spata18 (ENSLBEG00000028360) #17	sgcb (ENSLBEG00000028358) #18	dcun1d4 (ENSLBEG00000028353) #20	ENSLBEG00000028351	ociad2 (ENSLBEG00000028349) #22
Percomorphaceae_D	ANCESTRAL SPECIES	8	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Anabantaria	ANCESTRAL SPECIES	7	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Anabantoidei	ANCESTRAL SPECIES	6	ENSGT00940000157580.a.a	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Climbing perch	MODERN SPECIES	17	tmem165 (ENSATEG00000015107)	srd5a3 (ENSATEG00000015099)	kdr (ENSATEG00000015075) #7	ENSATEG00000015042 #8	pdgfra (ENSATEG00000014902) #9	gsx2 (ENSATEG00000014864) #10	lnx1 (ENSATEG00000014847) #12	ENSATEG00000025905	scfd2 (ENSATEG00000014799) #14	rasl11b (ENSATEG00000014839) #15	ENSATEG00000014784	usp46 (ENSATEG00000014752) #16	spata18 (ENSATEG00000014736) #17	sgcb (ENSATEG00000014716) #18	dcun1d4 (ENSATEG00000014690) #20	ociad2 (ENSATEG00000014671) #22	fryl (ENSATEG00000014583) #24	zar1 (ENSATEG00000014450) #25	SLC10A4 (ENSATEG00000014429) #26	slain2 (ENSATEG00000014363) #27	anapc4 (ENSATEG00000014342)	PALLD (ENSATEG00000014297)	cbr4 (ENSATEG00000014282)	SH3RF1 (ENSATEG00000014208)	NEK1 (ENSATEG00000014184)	FBXL5 (ENSATEG00000014125)	CC2D2A (ENSATEG00000013985)	ENSATEG00000013967	C1QTNF7 (ENSATEG00000013953)	CPEB2 (ENSATEG00000013906)	ndnf (ENSATEG00000013882)
Siamese fighting fish	MODERN SPECIES	15	ENSBSLG00000000874	clocka (ENSBSLG00000001299)	tmem165 (ENSBSLG00000001359)	srd5a3 (ENSBSLG00000001368)	kdr (ENSBSLG00000001394) #7	ENSBSLG00000001473 #8	pdgfra (ENSBSLG00000001662) #9	gsx2 (ENSBSLG00000002005) #10	lnx1 (ENSBSLG00000002161) #12	scfd2 (ENSBSLG00000002299) #14	rasl11b (ENSBSLG00000002539) #15	usp46 (ENSBSLG00000002578) #16	spata18 (ENSBSLG00000002795) #17	ENSBSLG00000002837 #18	dcun1d4 (ENSBSLG00000002858) #20	ociad2 (ENSBSLG00000002877) #22	fryl (ENSBSLG00000002973) #24	zar1 (ENSBSLG00000003261) #25	SLC10A4 (ENSBSLG00000003264) #26	slain2 (ENSBSLG00000003290) #27	anapc4 (ENSBSLG00000003280)	PALLD (ENSBSLG00000003301)	cbr4 (ENSBSLG00000003321)	sh3rf1 (ENSBSLG00000003324)	NEK1 (ENSBSLG00000003333)	fbxl5 (ENSBSLG00000003348)	CC2D2A (ENSBSLG00000003358)	CPEB2 (ENSBSLG00000003372)	ENSBSLG00000003386	ndnf (ENSBSLG00000003389)	prdm5 (ENSBSLG00000003396)
Carangaria	ANCESTRAL SPECIES	7	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357
Pleuronectoidei	ANCESTRAL SPECIES	29	ENSGT00940000157580.a.a	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588
Tongue sole	MODERN SPECIES	11	ENSCSEG00000020166	ENSCSEG00000020170	dnttip2 (ENSCSEG00000020173)	gclm (ENSCSEG00000020177)	ccl25b (ENSCSEG00000020188)	ENSCSEG00000020189	pole4 (ENSCSEG00000020195)	ENSCSEG00000020199	scfd2 (ENSCSEG00000020203) #14	rasl11b (ENSCSEG00000020208) #15	usp46 (ENSCSEG00000020211) #16	spata18 (ENSCSEG00000020214) #17	sgcb (ENSCSEG00000020217) #18	ENSCSEG00000020226 #19	dcun1d4 (ENSCSEG00000020229) #20	ociad2 (ENSCSEG00000020241) #22	fryl (ENSCSEG00000020247) #24	ENSCSEG00000020258 #24	zar1 (ENSCSEG00000020262) #25	SLC10A4 (ENSCSEG00000020265) #26	yjefn3 (ENSCSEG00000020267)	slain2 (ENSCSEG00000000198) #27	anapc4 (ENSCSEG00000000203)	ENSCSEG00000000206	ENSCSEG00000000209	ENSCSEG00000000222	ENSCSEG00000000223	XCR1 (ENSCSEG00000000226)	ENSCSEG00000000228	ENSCSEG00000000231	OLFML2B (ENSCSEG00000000234)
Turbot	MODERN SPECIES	3	tmem165 (ENSSMAG00000014283)	srd5a3 (ENSSMAG00000014270)	kdr (ENSSMAG00000014257) #7	ENSSMAG00000014222 #8	pdgfra (ENSSMAG00000014178) #9	gsx2 (ENSSMAG00000014168) #10	ENSSMAG00000023937	lnx1 (ENSSMAG00000014117) #12	scfd2 (ENSSMAG00000014072) #14	rasl11b (ENSSMAG00000027898) #15	usp46 (ENSSMAG00000014024) #16	spata18 (ENSSMAG00000013996) #17	sgcb (ENSSMAG00000013971) #18	ENSSMAG00000013966 #19	dcun1d4 (ENSSMAG00000013914) #20	ociad2 (ENSSMAG00000013902) #22	fryl (ENSSMAG00000013398) #24	zar1 (ENSSMAG00000013312) #25	SLC10A4 (ENSSMAG00000013305) #26	slain2 (ENSSMAG00000013223) #27	anapc4 (ENSSMAG00000013200)	PALLD (ENSSMAG00000013023)	cbr4 (ENSSMAG00000013008)	SH3RF1 (ENSSMAG00000012966)	NEK1 (ENSSMAG00000012933)	FBXL5 (ENSSMAG00000012902)	ENSSMAG00000012885	ENSSMAG00000030569	ENSSMAG00000032953	ENSSMAG00000018806	ENSSMAG00000018835
Carangaria_A	ANCESTRAL SPECIES	3	ENSGT00940000156710.r #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357
Seriola	ANCESTRAL SPECIES	39	ENSGT00500000044920	ENSGT00940000156710.r #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000157895	ENSGT00390000014380.h.b.b.i.b.a.a.a	ENSGT00940000154713.A.c.a	ENSGT00940000156234.a.a	ENSGT00940000155607.mc.a
Yellowtail amberjack	MODERN SPECIES	2913										usp46 (ENSSLDG00000021228) #16	ENSSLDG00000021254	spata18 (ENSSLDG00000021266) #17	sgcb (ENSSLDG00000021301) #18	ENSSLDG00000021323 #19	dcun1d4 (ENSSLDG00000021342) #20	ociad2 (ENSSLDG00000021385) #22	fryl (ENSSLDG00000021420) #24	zar1 (ENSSLDG00000021533) #25	SLC10A4 (ENSSLDG00000021574) #26	slain2 (ENSSLDG00000021599) #27	anapc4 (ENSSLDG00000021676)	PALLD (ENSSLDG00000021747)	cbr4 (ENSSLDG00000021791)	sh3rf1 (ENSSLDG00000021808)	ENSSLDG00000021827	fbxl5 (ENSSLDG00000021849)	ATP10A (ENSSLDG00000021882)	ENSSLDG00000021945	GABRB3 (ENSSLDG00000022178)	GABRA5 (ENSSLDG00000022210)	GABRG3 (ENSSLDG00000022244)
Greater amberjack	MODERN SPECIES	65	clocka (ENSSDUG00000022844)	tmem165 (ENSSDUG00000022862)	srd5a3 (ENSSDUG00000022865)	kdr (ENSSDUG00000022869) #7	ENSSDUG00000022885 #8	pdgfra (ENSSDUG00000022930) #9	gsx2 (ENSSDUG00000022937) #10	lnx1 (ENSSDUG00000022944) #12	scfd2 (ENSSDUG00000022953) #14	rasl11b (ENSSDUG00000022959) #15	usp46 (ENSSDUG00000022963) #16	ENSSDUG00000022974	spata18 (ENSSDUG00000022982) #17	sgcb (ENSSDUG00000022996) #18	dcun1d4 (ENSSDUG00000023011) #20	ociad2 (ENSSDUG00000023024) #22	fryl (ENSSDUG00000000072) #24	zar1 (ENSSDUG00000000360) #25	SLC10A4 (ENSSDUG00000000455) #26	slain2 (ENSSDUG00000000470) #27	anapc4 (ENSSDUG00000000515)	PALLD (ENSSDUG00000000615)	cbr4 (ENSSDUG00000000676)	sh3rf1 (ENSSDUG00000000698)	ENSSDUG00000000765	fbxl5 (ENSSDUG00000000831)	ATP10A (ENSSDUG00000000897)	ENSSDUG00000001018	GABRB3 (ENSSDUG00000001328)	GABRA5 (ENSSDUG00000001377)	GABRG3 (ENSSDUG00000001399)
Barramundi perch	MODERN SPECIES	106										rasl11b (ENSLCAG00010016692) #15	usp46 (ENSLCAG00010016685) #16	spata18 (ENSLCAG00010016676) #17	sgcb (ENSLCAG00010016669) #18	ENSLCAG00010016666 #19	dcun1d4 (ENSLCAG00010016657) #20	ociad2 (ENSLCAG00010016650) #22	fryl (ENSLCAG00010015518) #24	zar1 (ENSLCAG00010015307) #25	SLC10A4 (ENSLCAG00010015302) #26	slain2 (ENSLCAG00010015293) #27	anapc4 (ENSLCAG00010015267)	PALLD (ENSLCAG00010015151)	cbr4 (ENSLCAG00010015096)	sh3rf1 (ENSLCAG00010015087)	NEK1 (ENSLCAG00010015049)	fbxl5 (ENSLCAG00010015032)	CC2D2A (ENSLCAG00010014952)	C1QTNF7 (ENSLCAG00010014917)	CPEB2 (ENSLCAG00010014889)	ndnf (ENSLCAG00010014869)	prdm5 (ENSLCAG00010014865)
Ovalentaria	ANCESTRAL SPECIES	9	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357
Atherinomorphae	ANCESTRAL SPECIES	7	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	7	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192.qb #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Aplocheiloidei	ANCESTRAL SPECIES	72									ENSGT00390000011192.qb #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b	ENSGT00940000158340.j
Turquoise killifish	MODERN SPECIES	7												usp46 (ENSNFUG00015021629) #16	spata18 (ENSNFUG00015022088) #17	SGCB (ENSNFUG00015022094) #18	DCUN1D4 (ENSNFUG00015022101) #20	ociad2 (ENSNFUG00015022114) #22	fryl (ENSNFUG00015022124) #24	zar1 (ENSNFUG00015022150) #25	SLC10A4 (ENSNFUG00015022151) #26	SLAIN2 (ENSNFUG00015022153) #27	anapc4 (ENSNFUG00015022163)	PALLD (ENSNFUG00015022197)	ENSNFUG00015022380	CBR4 (ENSNFUG00015022382)	SH3RF1 (ENSNFUG00015014099)
Mangrove rivulus	MODERN SPECIES	71							ENSKMAG00000012594 #14	rasl11b (ENSKMAG00000012603) #15	ENSKMAG00000012619	ENSKMAG00000012631	usp46 (ENSKMAG00000012660) #16	spata18 (ENSKMAG00000012693) #17	sgcb (ENSKMAG00000012713) #18	ENSKMAG00000012738 #19	dcun1d4 (ENSKMAG00000012750) #20	ociad2 (ENSKMAG00000012793) #22	fryl (ENSKMAG00000012844) #24	zar1 (ENSKMAG00000012972) #25	SLC10A4 (ENSKMAG00000012986) #26	slain2 (ENSKMAG00000013020) #27	anapc4 (ENSKMAG00000013084)	PALLD (ENSKMAG00000013195)	cbr4 (ENSKMAG00000013237)	sh3rf1 (ENSKMAG00000013260)	ENSKMAG00000013302	fbxl5 (ENSKMAG00000013329)	CC2D2A (ENSKMAG00000013398)	C1QTNF7 (ENSKMAG00000013560)	CPEB2 (ENSKMAG00000013593)	ndnf (ENSKMAG00000013632)	prdm5 (ENSKMAG00000013663)
Cyprinodontoidei	ANCESTRAL SPECIES	10	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192.qb #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT01100000266834	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
NAME_4	ANCESTRAL SPECIES	11	ENSGT00940000157580.a.a	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192.qb #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT01100000266834	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Mummichog	MODERN SPECIES	2185															dcun1d4 (ENSFHEG00000014115) #20	ociad2 (ENSFHEG00000014069) #22	fryl (ENSFHEG00000014043) #24	zar1 (ENSFHEG00000013858) #25	SLC10A4 (ENSFHEG00000013725) #26	slain2 (ENSFHEG00000013686) #27	anapc4 (ENSFHEG00000013665)	PALLD (ENSFHEG00000000323)	cbr4 (ENSFHEG00000013565)	sh3rf1 (ENSFHEG00000013553)	NEK1 (ENSFHEG00000013544)	ENSFHEG00000013507	fbxl5 (ENSFHEG00000013473)	CC2D2A (ENSFHEG00000013423)	C1QTNF7 (ENSFHEG00000000298)	CPEB2 (ENSFHEG00000013134)	ndnf (ENSFHEG00000013063)
Sheepshead minnow	MODERN SPECIES	790									ENSCVAG00000005208 #14	rasl11b (ENSCVAG00000005192) #15	usp46 (ENSCVAG00000005185) #16	ENSCVAG00000005133	spata18 (ENSCVAG00000005117) #17	sgcb (ENSCVAG00000004982) #18	dcun1d4 (ENSCVAG00000004946) #20	ociad2 (ENSCVAG00000004891) #22	fryl (ENSCVAG00000004876) #24	ENSCVAG00000004753 #24	zar1 (ENSCVAG00000004736) #25	SLC10A4 (ENSCVAG00000004678) #26	slain2 (ENSCVAG00000000140) #27	ENSCVAG00000004557	pomgnt1 (ENSCVAG00000004548)	ENSCVAG00000004498	ENSCVAG00000004483	ENSCVAG00000004473	ENSCVAG00000000130
Poeciliinae	ANCESTRAL SPECIES	7	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192.qb #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT01100000266834	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Poecilia	ANCESTRAL SPECIES	1	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192.qb #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT01100000266834	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
NAME_6	ANCESTRAL SPECIES	15	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192.qb #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT01100000266834	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Amazon molly	MODERN SPECIES	289	clocka (ENSPFOG00000017215)	tmem165 (ENSPFOG00000017287)	srd5a3 (ENSPFOG00000017304)	kdr (ENSPFOG00000017312) #7	ENSPFOG00000017402 #8	pdgfra (ENSPFOG00000017594) #9	gsx2 (ENSPFOG00000017687) #10	lnx1 (ENSPFOG00000017706) #12	scfd2 (ENSPFOG00000017765) #14	rasl11b (ENSPFOG00000017780) #15	usp46 (ENSPFOG00000017792) #16	spata18 (ENSPFOG00000017824) #17	sgcb (ENSPFOG00000017856) #18	ENSPFOG00000024831 #19	dcun1d4 (ENSPFOG00000017866) #20	ociad2 (ENSPFOG00000017894) #22	fryl (ENSPFOG00000017964) #24	zar1 (ENSPFOG00000018279) #25	SLC10A4 (ENSPFOG00000018286) #26	slain2 (ENSPFOG00000018380) #27	anapc4 (ENSPFOG00000018317)	PALLD (ENSPFOG00000018424)	SLC10A4 (ENSPFOG00000018374) #26	cbr4 (ENSPFOG00000018457)	sh3rf1 (ENSPFOG00000018468)	NEK1 (ENSPFOG00000018496)	fbxl5 (ENSPFOG00000018518)	CC2D2A (ENSPFOG00000018536)	C1QTNF7 (ENSPFOG00000018594)	CPEB2 (ENSPFOG00000018603)	ndnf (ENSPFOG00000018615)
Sailfin molly	MODERN SPECIES	2360														sgcb (ENSPLAG00000002010) #18	dcun1d4 (ENSPLAG00000001997) #20	ociad2 (ENSPLAG00000001990) #22	ENSPLAG00000001981 #24	fryl (ENSPLAG00000001969) #24
Guppy	MODERN SPECIES	456	tmem165 (ENSPREG00000019820)	srd5a3 (ENSPREG00000019800)	kdr (ENSPREG00000019671) #7	kit (ENSPREG00000019556) #8	pdgfra (ENSPREG00000019463) #9	gsx2 (ENSPREG00000019445) #10	lnx1 (ENSPREG00000019417) #12	scfd2 (ENSPREG00000019404) #14	rasl11b (ENSPREG00000019386) #15	ENSPREG00000019383	usp46 (ENSPREG00000019366) #16	spata18 (ENSPREG00000019322) #17	sgcb (ENSPREG00000019293) #18	ENSPREG00000019283 #19	dcun1d4 (ENSPREG00000019250) #20	ociad2 (ENSPREG00000019231) #22	fryl (ENSPREG00000018949) #24	zar1 (ENSPREG00000018864) #25	SLC10A4 (ENSPREG00000018855) #26	slain2 (ENSPREG00000018818) #27	anapc4 (ENSPREG00000018731)	PALLD (ENSPREG00000018684)	cbr4 (ENSPREG00000018660)	sh3rf1 (ENSPREG00000018641)	ENSPREG00000018620	fbxl5 (ENSPREG00000018585)	CC2D2A (ENSPREG00000018436)	C1QTNF7 (ENSPREG00000018410)	CPEB2 (ENSPREG00000018393)	ndnf (ENSPREG00000018382)	prdm5 (ENSPREG00000018366)
Platyfish	MODERN SPECIES	23	clocka (ENSXMAG00000016928)	tmem165 (ENSXMAG00000016958)	srd5a3 (ENSXMAG00000021890)	kdr (ENSXMAG00000013541) #7	ENSXMAG00000013503 #8	pdgfra (ENSXMAG00000014365) #9	gsx2 (ENSXMAG00000014362) #10	lnx1 (ENSXMAG00000014349) #12	scfd2 (ENSXMAG00000024678) #14	rasl11b (ENSXMAG00000014332) #15	usp46 (ENSXMAG00000014314) #16	spata18 (ENSXMAG00000014298) #17	sgcb (ENSXMAG00000014291) #18	ENSXMAG00000029549 #19	dcun1d4 (ENSXMAG00000014276) #20	ociad2 (ENSXMAG00000014272) #22	ENSXMAG00000014195 #24	fryl (ENSXMAG00000025446) #24	zar1 (ENSXMAG00000011812) #25	SLC10A4 (ENSXMAG00000011809) #26	slain2 (ENSXMAG00000011799) #27	anapc4 (ENSXMAG00000011744)	PALLD (ENSXMAG00000014163)	cbr4 (ENSXMAG00000014153)	sh3rf1 (ENSXMAG00000014129)	ENSXMAG00000011778	fbxl5 (ENSXMAG00000005214)	CC2D2A (ENSXMAG00000011784)	C1QTNF7 (ENSXMAG00000026559)	CPEB2 (ENSXMAG00000002128)	ndnf (ENSXMAG00000013814)
Oryzias	ANCESTRAL SPECIES	30	ENSGT00940000155528.t.d.a	ENSGT00940000157639	ENSGT00390000000289	ENSGT00390000013329	ENSGT00390000003821	ENSGT01030000234624.b.b.c.a.a.m	ENSGT00390000000568	ENSGT00940000157546	ENSGT00730000111147.d	ENSGT00940000165304	ENSGT00500000044869.a.b	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000153284.b #16	ENSGT00940000178313	ENSGT00940000158643 #15	ENSGT00390000011192 #14	ENSGT00940000158757.l #12	ENSGT00940000156043 #10
Oryzias_b	ANCESTRAL SPECIES	35	ENSGT00940000155528.t.d.a	ENSGT00940000157639	ENSGT00390000013329	ENSGT00390000000289	ENSGT00390000003821	ENSGT01030000234624.b.b.c.a.a.m	ENSGT00390000000568	ENSGT00940000157546	ENSGT00730000111147.d	ENSGT00940000165304	ENSGT00500000044869.a.b	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000153284.b #16	ENSGT00940000158643 #15	ENSGT00390000011192 #14	ENSGT00940000158757.l #12	ENSGT00940000156043 #10	ENSGT00940000156021 #9
Indian medaka	MODERN SPECIES	34			wdr18 (ENSOMEG00000017497)	med16 (ENSOMEG00000017424)	ENSOMEG00000017333	TRAPPC8 (ENSOMEG00000017264)	ENSOMEG00000017106	slc5a9 (ENSOMEG00000017016)	cherp (ENSOMEG00000016947)	dohh (ENSOMEG00000016754)	RSPH6A (ENSOMEG00000016720)	spata18 (ENSOMEG00000016688) #17	sgcb (ENSOMEG00000016672) #18	ENSOMEG00000016648 #19	dcun1d4 (ENSOMEG00000016634) #20	ociad2 (ENSOMEG00000016589) #22	ENSOMEG00000016555 #24	fryl (ENSOMEG00000016516) #24	zar1 (ENSOMEG00000016476) #25	SLC10A4 (ENSOMEG00000016428) #26	slain2 (ENSOMEG00000016407) #27	ENSOMEG00000016390	ENSOMEG00000016376	ENSOMEG00000016354	cbr4 (ENSOMEG00000016327)	sh3rf1 (ENSOMEG00000016279)	NEK1 (ENSOMEG00000016168)	usp46 (ENSOMEG00000015795) #16	rasl11b (ENSOMEG00000015767) #15	scfd2 (ENSOMEG00000015755) #14	lnx1 (ENSOMEG00000015729) #12
Javanese ricefish	MODERN SPECIES	18	TMEM259 (ENSOJAG00000002320)	wdr18 (ENSOJAG00000002300)	ENSOJAG00000002195	ENSOJAG00000002188	TRAPPC8 (ENSOJAG00000002056)	ENSOJAG00000001937	slc5a9 (ENSOJAG00000000943)	cherp (ENSOJAG00000000538)	dohh (ENSOJAG00000000505)	RSPH6A (ENSOJAG00000000497)	spata18 (ENSOJAG00000000487) #17	ENSOJAG00000000479	sgcb (ENSOJAG00000000472) #18	ENSOJAG00000000463 #19	dcun1d4 (ENSOJAG00000000446) #20	ociad2 (ENSOJAG00000000433) #22	zar1 (ENSOJAG00000000186) #25	SLC10A4 (ENSOJAG00000000178) #26	slain2 (ENSOJAG00000000153) #27	ENSOJAG00000000071	anapc4 (ENSOJAG00000013498)	PALLD (ENSOJAG00000012805)	cbr4 (ENSOJAG00000012724)	sh3rf1 (ENSOJAG00000012598)	ENSOJAG00000012542	usp46 (ENSOJAG00000012313) #16	rasl11b (ENSOJAG00000012284) #15	scfd2 (ENSOJAG00000012150) #14	lnx1 (ENSOJAG00000012082) #12	gsx2 (ENSOJAG00000012065) #10	pdgfra (ENSOJAG00000010790) #9
Oryzias_a	ANCESTRAL SPECIES	87						ENSGT01030000234624.b.b.c.a.a.m	ENSGT00390000000568	ENSGT00940000157546	ENSGT00730000111147.d	ENSGT00940000165304	ENSGT00500000044869.a.b	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000158460	ENSGT00940000153284.b #16	ENSGT00940000178313	ENSGT00940000158643 #15	ENSGT00390000011192 #14	ENSGT00940000158757.l #12	ENSGT00940000156043 #10	ENSGT00940000156021 #9
Japanese Medaka HdrR	MODERN SPECIES	18	MED16 (ENSORLG00000000109)	ENSORLG00000025503	ENSORLG00000000110	ENSORLG00000029104	TRAPPC8 (ENSORLG00000000118)	ENSORLG00000023122	slc5a9 (ENSORLG00000000128)	cherp (ENSORLG00000000138)	dohh (ENSORLG00000000152)	RSPH6A (ENSORLG00000029539)	spata18 (ENSORLG00000000158) #17	ENSORLG00000024361	sgcb (ENSORLG00000000171) #18	ENSORLG00000028975 #19	dcun1d4 (ENSORLG00000000179) #20	ociad2 (ENSORLG00000000187) #22	fryl (ENSORLG00000000234) #24	zar1 (ENSORLG00000000251) #25	SLC10A4 (ENSORLG00000000255) #26	slain2 (ENSORLG00000000260) #27	anapc4 (ENSORLG00000000318)	cbr4 (ENSORLG00000000359)	PALLD (ENSORLG00000000345)	sh3rf1 (ENSORLG00000000379)	ENSORLG00000000439	ENSORLG00000022131	usp46 (ENSORLG00000000451) #16	rasl11b (ENSORLG00000000467) #15	scfd2 (ENSORLG00000000475) #14	lnx1 (ENSORLG00000000492) #12	ENSORLG00000022408
Chinese medaka	MODERN SPECIES	1165													sgcb (ENSOSIG00000019046) #18	ENSOSIG00000019049 #19	dcun1d4 (ENSOSIG00000019058) #20	ociad2 (ENSOSIG00000019065) #22	anapc4 (ENSOSIG00000019234)	sh3rf1 (ENSOSIG00000019240)	ENSOSIG00000019253	usp46 (ENSOSIG00000019257) #16
Ovalentaria_B	ANCESTRAL SPECIES	8	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357
Pomacentridae	ANCESTRAL SPECIES	14	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875.mb	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Pomacentridae_A	ANCESTRAL SPECIES		ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875.mb	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Amphiprion	ANCESTRAL SPECIES	2	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT01060000248860 #13	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875.mb	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT01030000235096	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Orange clownfish	MODERN SPECIES	11	clocka (ENSAPEG00000015065)	tmem165 (ENSAPEG00000015106)	srd5a3 (ENSAPEG00000015129)	kdr (ENSAPEG00000015136) #7	ENSAPEG00000015242 #8	pdgfra (ENSAPEG00000015265) #9	gsx2 (ENSAPEG00000015352) #10	lnx1 (ENSAPEG00000015366) #12	scfd2 (ENSAPEG00000015405) #14	rasl11b (ENSAPEG00000015415) #15	usp46 (ENSAPEG00000015425) #16	spata18 (ENSAPEG00000015467) #17	sgcb (ENSAPEG00000015597) #18	ENSAPEG00000015623 #19	dcun1d4 (ENSAPEG00000015630) #20	ociad2 (ENSAPEG00000015671) #22	fryl (ENSAPEG00000015684) #24	ENSAPEG00000015838 #24	zar1 (ENSAPEG00000015876) #25	SLC10A4 (ENSAPEG00000015883) #26	slain2 (ENSAPEG00000015904) #27	anapc4 (ENSAPEG00000015942)	PALLD (ENSAPEG00000016082)	cbr4 (ENSAPEG00000016348)	sh3rf1 (ENSAPEG00000016378)	ENSAPEG00000016430	fbxl5 (ENSAPEG00000016481)	CC2D2A (ENSAPEG00000016528)	C1QTNF7 (ENSAPEG00000016743)	CPEB2 (ENSAPEG00000016778)	ndnf (ENSAPEG00000016834)
Clown anemonefish	MODERN SPECIES	2134												spata18 (ENSAOCG00000019932) #17	sgcb (ENSAOCG00000001474) #18	ENSAOCG00000019985 #19	dcun1d4 (ENSAOCG00000020017) #20	ociad2 (ENSAOCG00000001482) #22	fryl (ENSAOCG00000001495) #24	ENSAOCG00000020258 #24	zar1 (ENSAOCG00000020348) #25	SLC10A4 (ENSAOCG00000020358) #26
Spiny chromis	MODERN SPECIES	371													spata18 (ENSAPOG00000022046) #17	sgcb (ENSAPOG00000022076) #18	dcun1d4 (ENSAPOG00000022112) #20	ociad2 (ENSAPOG00000022128) #22	fryl (ENSAPOG00000022328) #24	zar1 (ENSAPOG00000022372) #25	SLC10A4 (ENSAPOG00000022380) #26	slain2 (ENSAPOG00000022406) #27	anapc4 (ENSAPOG00000022595)	PALLD (ENSAPOG00000022626)	cbr4 (ENSAPOG00000022649)	sh3rf1 (ENSAPOG00000022695)	ENSAPOG00000022747	fbxl5 (ENSAPOG00000022790)	CC2D2A (ENSAPOG00000022966)	ENSAPOG00000022998	C1QTNF7 (ENSAPOG00000023030)	CPEB2 (ENSAPOG00000023124)	ndnf (ENSAPOG00000023171)
Bicolor damselfish	MODERN SPECIES	266	ENSSPAG00000015386	clocka (ENSSPAG00000015313)	tmem165 (ENSSPAG00000015288)	srd5a3 (ENSSPAG00000015273)	kdr (ENSSPAG00000015223) #7	ENSSPAG00000015156 #8	pdgfra (ENSSPAG00000015026) #9	gsx2 (ENSSPAG00000014991) #10	lnx1 (ENSSPAG00000014954) #12	scfd2 (ENSSPAG00000014934) #14	rasl11b (ENSSPAG00000014922) #15	usp46 (ENSSPAG00000014882) #16	spata18 (ENSSPAG00000014812) #17	sgcb (ENSSPAG00000014775) #18	dcun1d4 (ENSSPAG00000014740) #20	ociad2 (ENSSPAG00000014723) #22	fryl (ENSSPAG00000014622) #24	ENSSPAG00000014589 #24	zar1 (ENSSPAG00000014544) #25	SLC10A4 (ENSSPAG00000014528) #26	slain2 (ENSSPAG00000014473) #27	anapc4 (ENSSPAG00000014363)	PALLD (ENSSPAG00000014197)	cbr4 (ENSSPAG00000014157)	sh3rf1 (ENSSPAG00000014116)	ENSSPAG00000014095	fbxl5 (ENSSPAG00000014052)	CC2D2A (ENSSPAG00000014001)	C1QTNF7 (ENSSPAG00000013964)	CPEB2 (ENSSPAG00000013922)	ndnf (ENSSPAG00000013901)
Cichlidae	ANCESTRAL SPECIES	17	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000175494	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	10	ENSGT00940000157580.a.a	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o.c.b.a	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	16	ENSGT00940000157580.a.a	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o.c.b.a	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00940000157580.a.a	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o.c.b.a	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Burton s mouthbrooder	MODERN SPECIES	324	clock (ENSHBUG00000015414)	tmem165 (ENSHBUG00000015171)	srd5a3 (ENSHBUG00000015146)	kdr (ENSHBUG00000015135) #7	ENSHBUG00000015115 #8	pdgfra (ENSHBUG00000015082) #9	gsx2 (ENSHBUG00000015055) #10	lnx1 (ENSHBUG00000015040) #12	scfd2 (ENSHBUG00000014957) #14	rasl11b (ENSHBUG00000014917) #15	usp46 (ENSHBUG00000014894) #16	spata18 (ENSHBUG00000014854) #17	sgcb (ENSHBUG00000014847) #18	ENSHBUG00000014822 #19	dcun1d4 (ENSHBUG00000014816) #20	ociad2 (ENSHBUG00000000434) #22	fryl (ENSHBUG00000014763) #24	zar1 (ENSHBUG00000014633) #25	SLC10A4 (ENSHBUG00000014576) #26	slain2 (ENSHBUG00000014536) #27	anapc4 (ENSHBUG00000014486)	PALLD (ENSHBUG00000014424)	cbr4 (ENSHBUG00000014376)	sh3rf1 (ENSHBUG00000014351)	NEK1 (ENSHBUG00000014287)
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT00940000176973	ENSGT00940000157580.a.a	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00940000160136.o.c.b.a	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
P. nyererei	MODERN SPECIES	341	clocka (ENSPNYG00000010759)	tmem165 (ENSPNYG00000010804)	srd5a3 (ENSPNYG00000010823)	kdr (ENSPNYG00000010836) #7	ENSPNYG00000010935 #8	pdgfra (ENSPNYG00000011115) #9	gsx2 (ENSPNYG00000011191) #10	ENSPNYG00000011200	lnx1 (ENSPNYG00000011221) #12	scfd2 (ENSPNYG00000011260) #14	rasl11b (ENSPNYG00000011286) #15	usp46 (ENSPNYG00000011311) #16	spata18 (ENSPNYG00000011335) #17	sgcb (ENSPNYG00000011404) #18	dcun1d4 (ENSPNYG00000011443) #20	ociad2 (ENSPNYG00000011490) #22	fryl (ENSPNYG00000011531) #24	zar1 (ENSPNYG00000011639) #25	SLC10A4 (ENSPNYG00000011655) #26	slain2 (ENSPNYG00000011682) #27	anapc4 (ENSPNYG00000011714)	PALLD (ENSPNYG00000011751)	cbr4 (ENSPNYG00000011777)	sh3rf1 (ENSPNYG00000011802)	NEK1 (ENSPNYG00000011841)	fbxl5 (ENSPNYG00000011894)	CC2D2A (ENSPNYG00000011949)	C1QTNF7 (ENSPNYG00000012100)	CPEB2 (ENSPNYG00000012125)	ndnf (ENSPNYG00000012171)	prdm5 (ENSPNYG00000012194)
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT00940000176973	ENSGT00940000157580.a.a	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000158460	ENSGT00940000160136.o.c.b.a	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b	ENSGT00940000158340
Zebra mbuna	MODERN SPECIES	1105	ENSMZEG00005020197	clocka (ENSMZEG00005020202)	tmem165 (ENSMZEG00005020209)	srd5a3 (ENSMZEG00005020214)	kdr (ENSMZEG00005020217) #7	ENSMZEG00005020225 #8	pdgfra (ENSMZEG00005020232) #9	gsx2 (ENSMZEG00005020245) #10	lnx1 (ENSMZEG00005020255) #12	scfd2 (ENSMZEG00005020271) #14	rasl11b (ENSMZEG00005020278) #15	usp46 (ENSMZEG00005020283) #16	spata18 (ENSMZEG00005020290) #17	sgcb (ENSMZEG00005020295) #18	dcun1d4 (ENSMZEG00005020307) #20	ociad2 (ENSMZEG00005020319) #22	fryl (ENSMZEG00005020330) #24	zar1 (ENSMZEG00005020354) #25	ENSMZEG00005020371	ENSMZEG00005020463 #24	SLC10A4 (ENSMZEG00005020481) #26	slain2 (ENSMZEG00005020490) #27	anapc4 (ENSMZEG00005020501)	PALLD (ENSMZEG00005020519)	cbr4 (ENSMZEG00005020546)	sh3rf1 (ENSMZEG00005020554)	ENSMZEG00005020564	ENSMZEG00005020570	ENSMZEG00005020577	ENSMZEG00005020582	ENSMZEG00005020589
Eastern happy	MODERN SPECIES	14	srd5a3 (ENSACLG00000015777)	kdr (ENSACLG00000015795) #7	ENSACLG00000015839 #8	pdgfra (ENSACLG00000015927) #9	gsx2 (ENSACLG00000016041) #10	ENSACLG00000016058	lnx1 (ENSACLG00000016117) #12	scfd2 (ENSACLG00000016140) #14	rasl11b (ENSACLG00000016163) #15	usp46 (ENSACLG00000016187) #16	ENSACLG00000016231	ENSACLG00000016237	spata18 (ENSACLG00000016247) #17	sgcb (ENSACLG00000016281) #18	dcun1d4 (ENSACLG00000016317) #20	ociad2 (ENSACLG00000016413) #22	fryl (ENSACLG00000016455) #24	zar1 (ENSACLG00000016994) #25	SLC10A4 (ENSACLG00000017060) #26	slain2 (ENSACLG00000017115) #27	anapc4 (ENSACLG00000017144)	PALLD (ENSACLG00000017313)	cbr4 (ENSACLG00000017477)	sh3rf1 (ENSACLG00000017503)	ENSACLG00000017553	ENSACLG00000017566	ENSACLG00000017593	fbxl5 (ENSACLG00000017609)	CC2D2A (ENSACLG00000017663)	C1QTNF7 (ENSACLG00000017876)	CPEB2 (ENSACLG00000017893)
Lyretail cichlid	MODERN SPECIES	307	ENSNBRG00000003145	clocka (ENSNBRG00000003188)	tmem165 (ENSNBRG00000003248)	srd5a3 (ENSNBRG00000003273)	kdr (ENSNBRG00000003289) #7	ENSNBRG00000003427 #8	pdgfra (ENSNBRG00000003739) #9	gsx2 (ENSNBRG00000003825) #10	lnx1 (ENSNBRG00000003845) #12	scfd2 (ENSNBRG00000003901) #14	rasl11b (ENSNBRG00000003915) #15	usp46 (ENSNBRG00000003927) #16	spata18 (ENSNBRG00000003958) #17	sgcb (ENSNBRG00000004007) #18	dcun1d4 (ENSNBRG00000004035) #20	ociad2 (ENSNBRG00000004076) #22	fryl (ENSNBRG00000004127) #24	zar1 (ENSNBRG00000004254) #25	SLC10A4 (ENSNBRG00000004325) #26	slain2 (ENSNBRG00000004362) #27	anapc4 (ENSNBRG00000004410)	PALLD (ENSNBRG00000004482)	cbr4 (ENSNBRG00000004516)	sh3rf1 (ENSNBRG00000004551)	ENSNBRG00000004599	fbxl5 (ENSNBRG00000004641)	CC2D2A (ENSNBRG00000004707)	C1QTNF7 (ENSNBRG00000004916)	CPEB2 (ENSNBRG00000004949)	ndnf (ENSNBRG00000004962)	prdm5 (ENSNBRG00000004976)
Nile tilapia	MODERN SPECIES	14	clocka (ENSONIG00000002943)	tmem165 (ENSONIG00000002956)	srd5a3 (ENSONIG00000027790)	kdr (ENSONIG00000002960) #7	ENSONIG00000002981 #8	pdgfra (ENSONIG00000003001) #9	gsx2 (ENSONIG00000003021) #10	ENSONIG00000037500	lnx1 (ENSONIG00000003022) #12	scfd2 (ENSONIG00000003029) #14	rasl11b (ENSONIG00000003031) #15	usp46 (ENSONIG00000003033) #16	spata18 (ENSONIG00000003034) #17	sgcb (ENSONIG00000003042) #18	dcun1d4 (ENSONIG00000003048) #20	ociad2 (ENSONIG00000003049) #22	fryl (ENSONIG00000003053) #24	zar1 (ENSONIG00000003067) #25	SLC10A4 (ENSONIG00000003068) #26	slain2 (ENSONIG00000028891) #27	anapc4 (ENSONIG00000003071)	PALLD (ENSONIG00000003079)	cbr4 (ENSONIG00000003085)	sh3rf1 (ENSONIG00000003088)	NEK1 (ENSONIG00000003091)	fbxl5 (ENSONIG00000003097)	CC2D2A (ENSONIG00000003099)	C1QTNF7 (ENSONIG00000030192)	CPEB2 (ENSONIG00000003107)	ndnf (ENSONIG00000029693)	prdm5 (ENSONIG00000003111)
Midas cichlid	MODERN SPECIES	922	ENSACIG00000023317	kdr (ENSACIG00000023323) #7	ENSACIG00000023347 #8	pdgfra (ENSACIG00000023436) #9	ENSACIG00000023450	gsx2 (ENSACIG00000023455) #10	lnx1 (ENSACIG00000023458) #12	scfd2 (ENSACIG00000023467) #14	rasl11b (ENSACIG00000023481) #15	usp46 (ENSACIG00000023483) #16	ENSACIG00000023489	ENSACIG00000023499	spata18 (ENSACIG00000023503) #17	sgcb (ENSACIG00000023518) #18	dcun1d4 (ENSACIG00000023521) #20	ociad2 (ENSACIG00000023525) #22	fryl (ENSACIG00000023550) #24	zar1 (ENSACIG00000023635) #25	SLC10A4 (ENSACIG00000023642) #26	slain2 (ENSACIG00000023645) #27	anapc4 (ENSACIG00000023649)	PALLD (ENSACIG00000023654)	cbr4 (ENSACIG00000023661)	sh3rf1 (ENSACIG00000023666)	ENSACIG00000023672	fbxl5 (ENSACIG00000000172)	CC2D2A (ENSACIG00000000246)	C1QTNF7 (ENSACIG00000000334)	CPEB2 (ENSACIG00000000358)	ndnf (ENSACIG00000000389)	prdm5 (ENSACIG00000000406)
Pinecone sodierfish	MODERN SPECIES	18	clocka (ENSMMDG00005021791)	tmem165 (ENSMMDG00005021793)	srd5a3 (ENSMMDG00005021794)	kdr (ENSMMDG00005021797) #7	ENSMMDG00005021802 #8	pdgfra (ENSMMDG00005021927) #9	ENSMMDG00005021934	gsx2 (ENSMMDG00005021936) #10	lnx1 (ENSMMDG00005021939) #12	scfd2 (ENSMMDG00005021950) #14	rasl11b (ENSMMDG00005021969) #15	usp46 (ENSMMDG00005021982) #16	spata18 (ENSMMDG00005022136) #17	sgcb (ENSMMDG00005022139) #18	dcun1d4 (ENSMMDG00005022142) #20	ociad2 (ENSMMDG00005000093) #22	fryl (ENSMMDG00005000565) #24	zar1 (ENSMMDG00005008904) #25	SLC10A4 (ENSMMDG00005008905) #26	slain2 (ENSMMDG00005008913) #27	anapc4 (ENSMMDG00005008935)	PALLD (ENSMMDG00005009027)	cbr4 (ENSMMDG00005009093)	sh3rf1 (ENSMMDG00005009097)	ENSMMDG00005009099	fbxl5 (ENSMMDG00005009104)	CC2D2A (ENSMMDG00005009121)	C1QTNF7 (ENSMMDG00005009143)	CPEB2 (ENSMMDG00005009150)	ndnf (ENSMMDG00005009257)	prdm5 (ENSMMDG00005009261)
Protacanthopterygii	ANCESTRAL SPECIES	34	ENSGT00940000156710 #7	ENSGT00940000155626 #8	ENSGT00940000156021 #9	ENSGT00940000163955	ENSGT00940000156043 #10	ENSGT00940000158757 #12	ENSGT00940000162578	ENSGT00390000011192 #14	ENSGT00940000158643 #15	ENSGT00940000178313	ENSGT00940000153284.b #16	ENSGT00390000013532 #17	ENSGT00390000008110 #18	ENSGT00390000014817 #19	ENSGT00940000156935 #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.a ##23	ENSGT00610000086058.a #24	ENSGT00390000012305.a #25	ENSGT00950000182808.a.a.b.b #26	ENSGT00390000017860.b #27	ENSGT00390000004612	ENSGT00940000153441.a.a	ENSGT00940000157620	ENSGT00940000155875	ENSGT00940000158460	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00390000007586.a.b
Salmoninae	ANCESTRAL SPECIES	15	ENSGT00510000048726.b	ENSGT00940000157580.a.a.c	ENSGT00390000005261.f	ENSGT00940000155626.fd.b #8	ENSGT00940000156021.d #9	ENSGT00940000163955.u.b	ENSGT00940000156043.gb.a #10	ENSGT00940000158757.m #12	ENSGT00390000011192.ob.a.a #14	ENSGT00940000158643.h #15	ENSGT00940000153284.b.q #16	ENSGT00390000013532.t #17	ENSGT00390000008110.f #18	ENSGT00390000014817.b #19	ENSGT00940000156935.r #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00390000003601.b #11	ENSGT00530000063690.a.a ##23	ENSGT00610000086058.a.ib.b #24	ENSGT00390000012305.a.j #25	ENSGT00950000182808.a.a.b.b.i #26	ENSGT00390000017860.b.h #27	ENSGT00390000004612.c	ENSGT00940000153441.a.a.hb.a	ENSGT00940000157620.e.b	ENSGT00940000155875.s.b.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.c.a	ENSGT00390000006172.c	ENSGT00940000155482	ENSGT00940000159588.c	ENSGT00940000160357.c
Huchen	MODERN SPECIES	638										SCFD2 (ENSHHUG00000039261) #14	rasl11b (ENSHHUG00000039256) #15	usp46 (ENSHHUG00000039217) #16	sgcb (ENSHHUG00000039212) #18	ENSHHUG00000039207 #19	dcun1d4 (ENSHHUG00000039167) #20	ociad2 (ENSHHUG00000039156) #22	ociad1 (ENSHHUG00000039126) ##23	FRYL (ENSHHUG00000038724) #24	zar1 (ENSHHUG00000038706) #25	SLC10A4 (ENSHHUG00000038703) #26	slain2 (ENSHHUG00000038681) #27	anapc4 (ENSHHUG00000038615)	ENSHHUG00000038608	PALLD (ENSHHUG00000038591)	cbr4 (ENSHHUG00000038575)	sh3rf1 (ENSHHUG00000038485)
Salmoninae_a	ANCESTRAL SPECIES	9	ENSGT00510000048726.b	ENSGT00940000157580.a.a.c	ENSGT00390000005261.f	ENSGT00940000155626.fd.b #8	ENSGT00940000156021.d #9	ENSGT00940000163955.u.b	ENSGT00940000156043.gb.a #10	ENSGT00940000158757.m #12	ENSGT00390000011192.ob.a.a #14	ENSGT00940000158643.h #15	ENSGT00940000153284.b.q #16	ENSGT00390000013532.t #17	ENSGT00390000008110.f #18	ENSGT00390000014817.b #19	ENSGT00940000156935.r #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.a ##23	ENSGT00610000086058.a.ib.b #24	ENSGT00390000012305.a.j #25	ENSGT00950000182808.a.a.b.b.i #26	ENSGT00390000017860.b.h #27	ENSGT00390000004612.c	ENSGT00940000153441.a.a.hb.a	ENSGT00940000157620.e.b	ENSGT00940000155875.s.b.b	ENSGT00940000158460	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.c.b	ENSGT00390000006172.d	ENSGT01060000249188.A	ENSGT00940000159588.d	ENSGT00940000160357.d
Salmo	ANCESTRAL SPECIES	14	ENSGT00510000048726.b	ENSGT00940000157580.a.a.c	ENSGT00390000005261.f	ENSGT00940000155626.fd.b #8	ENSGT00940000156021.d #9	ENSGT00940000163955.u.b	ENSGT00940000156043.gb.a #10	ENSGT00940000158757.m #12	ENSGT00390000011192.ob.b #14	ENSGT00940000158643.h #15	ENSGT00940000153284.b.q #16	ENSGT00390000013532.t #17	ENSGT00390000008110.f #18	ENSGT00390000014817.b #19	ENSGT00940000156935.r #20	ENSGT00530000063690.a.b.a.b #22	ENSGT01100000263620.C	ENSGT00390000003601.b.a.b #11	ENSGT00530000063690.a.a ##23	ENSGT00610000086058.a.ib.b #24	ENSGT00390000012305.a.j #25	ENSGT00950000182808.a.a.b.b.i #26	ENSGT00390000017860.b.h #27	ENSGT00390000004612.c	ENSGT00940000153441.a.a.hb.a	ENSGT00940000157620.e.b	ENSGT00940000155875.s.b.b	ENSGT00940000158460.n.b.a	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.c.a	ENSGT00390000006172.c	ENSGT00940000155482
River trout	MODERN SPECIES	14	tmem165 (ENSSTUG00000010472)	ENSSTUG00000010274 #8	pdgfra (ENSSTUG00000008915) #9	ENSSTUG00000008879	gsx2 (ENSSTUG00000008864) #10	lnx1 (ENSSTUG00000008761) #12	SCFD2 (ENSSTUG00000008595) #14	rasl11b (ENSSTUG00000008586) #15	ENSSTUG00000008583	ENSSTUG00000008575	usp46 (ENSSTUG00000008460) #16	spata18 (ENSSTUG00000008438) #17	sgcb (ENSSTUG00000008425) #18	ENSSTUG00000008416 #19	dcun1d4 (ENSSTUG00000008338) #20	ociad2 (ENSSTUG00000008331) #22	ociad1 (ENSSTUG00000008310) ##23	zar1 (ENSSTUG00000008006) #25	SLC10A4 (ENSSTUG00000007975) #26	slain2 (ENSSTUG00000007943) #27	anapc4 (ENSSTUG00000007734)	ENSSTUG00000007713	PALLD (ENSSTUG00000007648)	cbr4 (ENSSTUG00000007622)	sh3rf1 (ENSSTUG00000007535)	NEK1 (ENSSTUG00000007429)	ENSSTUG00000007416	fbxl5 (ENSSTUG00000007370)	CC2D2A (ENSSTUG00000007241)	C1QTNF7 (ENSSTUG00000007234)	CPEB2 (ENSSTUG00000006885)
Atlantic salmon	MODERN SPECIES	1	CLOCK (ENSSSAG00000003979)	tmem165 (ENSSSAG00000105925)	ENSSSAG00000003744 #8	pdgfra (ENSSSAG00000002530) #9	ENSSSAG00000070284	gsx2 (ENSSSAG00000070282) #10	lnx1 (ENSSSAG00000070275) #12	ENSSSAG00000113298	SCFD2 (ENSSSAG00000070240) #14	rasl11b (ENSSSAG00000105180) #15	usp46 (ENSSSAG00000070233) #16	spata18 (ENSSSAG00000118912) #17	ENSSSAG00000070115 #19	ENSSSAG00000091912	dcun1d4 (ENSSSAG00000070090) #20	ociad2 (ENSSSAG00000105886) #22	ociad1 (ENSSSAG00000093626) ##23	fryl (ENSSSAG00000068854) #24	SLC10A4 (ENSSSAG00000117822) #26	ENSSSAG00000068790	slain2 (ENSSSAG00000068771) #27	ENSSSAG00000103529	anapc4 (ENSSSAG00000116228)	anapc4 (ENSSSAG00000068615)	ENSSSAG00000117090	PALLD (ENSSSAG00000068098)	cbr4 (ENSSSAG00000068087)	SH3RF1 (ENSSSAG00000068074)	NEK1 (ENSSSAG00000068004)	ENSSSAG00000067971	FBXL5 (ENSSSAG00000067925)
Oncorhynchus	ANCESTRAL SPECIES	8	ENSGT00510000048726.b	ENSGT00940000157580.a.a.c	ENSGT00390000005261.f	ENSGT00940000155626.fd.b #8	ENSGT00940000156021.d #9	ENSGT00940000163955.u.b	ENSGT00940000156043.gb.a #10	ENSGT00940000158757.m #12	ENSGT00390000011192.ob.a.a #14	ENSGT00940000158643.h #15	ENSGT00940000153284.b.q #16	ENSGT00390000013532.t #17	ENSGT00390000008110.f #18	ENSGT00390000014817.b #19	ENSGT00940000156935.r #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.a ##23	ENSGT00610000086058.a.ib.b #24	ENSGT00390000012305.a.j #25	ENSGT00950000182808.a.a.b.b.i #26	ENSGT00390000017860.b.h #27	ENSGT00390000004612.c	ENSGT00940000153441.a.a.hb.a	ENSGT01010000225520	ENSGT00940000155875.s.b.b	ENSGT00940000158460	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.c.a	ENSGT00390000006172.c	ENSGT00940000155482	ENSGT00940000159588.c	ENSGT00940000160357.c
Oncorhynchus_a	ANCESTRAL SPECIES	14	ENSGT00510000048726.b	ENSGT00940000157580.a.a.c	ENSGT00390000005261.f	ENSGT00940000155626.fd.b #8	ENSGT00940000156021.d #9	ENSGT00940000163955.u.b	ENSGT00940000156043.gb.a #10	ENSGT00940000158757.m #12	ENSGT00390000011192.ob.a.a #14	ENSGT00940000158643.h #15	ENSGT00940000153284.b.q #16	ENSGT00390000013532.t #17	ENSGT00390000008110.f #18	ENSGT00390000014817.b #19	ENSGT00940000156935.r #20	ENSGT00530000063690.a.b.a.b #22	ENSGT00530000063690.a.a ##23	ENSGT00610000086058.a.ib.b #24	ENSGT00390000012305.a.j #25	ENSGT00950000182808.a.a.b.b.i #26	ENSGT00390000017860.b.h #27	ENSGT00390000004612.c	ENSGT00940000153441.a.a.hb.a	ENSGT01010000225520	ENSGT00940000155875.s.b.b	ENSGT00940000158460	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.c.a	ENSGT00390000006172.c	ENSGT00940000155482	ENSGT00940000159588.c	ENSGT00940000154998.a.b.b.a
Chinook salmon	MODERN SPECIES	29	tmem165 (ENSOTSG00005019289)	KIT (ENSOTSG00005019264) #8	pdgfra (ENSOTSG00005017035) #9	ENSOTSG00005017022	gsx2 (ENSOTSG00005017019) #10	ENSOTSG00005017018	ENSOTSG00005017015	lnx1 (ENSOTSG00005017009) #12	SCFD2 (ENSOTSG00005017001) #14	rasl11b (ENSOTSG00005016997) #15	usp46 (ENSOTSG00005016996) #16	spata18 (ENSOTSG00005016994) #17	sgcb (ENSOTSG00005016991) #18	ENSOTSG00005016990 #19	dcun1d4 (ENSOTSG00005016987) #20	ociad2 (ENSOTSG00005016984) #22	ociad1 (ENSOTSG00005016981) ##23	fryl (ENSOTSG00005016907) #24	zar1 (ENSOTSG00005016906) #25	SLC10A4 (ENSOTSG00005016905) #26	slain2 (ENSOTSG00005016903) #27	anapc4 (ENSOTSG00005015428)	PALLD (ENSOTSG00005015155)	ENSOTSG00005015152	sh3rf1 (ENSOTSG00005015149)	NEK1 (ENSOTSG00005015119)	ENSOTSG00005015117	fbxl5 (ENSOTSG00005015116)	CC2D2A (ENSOTSG00005014977)	C1QTNF7 (ENSOTSG00005014965)	ENSOTSG00005014960
Coho salmon	MODERN SPECIES	4	CLOCK (ENSOKIG00005048996)	tmem165 (ENSOKIG00005049269)	ENSOKIG00005049332 #8	pdgfra (ENSOKIG00005049586) #9	ENSOKIG00005049791	gsx2 (ENSOKIG00005049795) #10	lnx1 (ENSOKIG00005049798) #12	SCFD2 (ENSOKIG00005049808) #14	rasl11b (ENSOKIG00005049820) #15	spata18 (ENSOKIG00005003783) #17	ENSOKIG00005003785	ENSOKIG00005003789	sgcb (ENSOKIG00005003791) #18	ENSOKIG00005003798 #19	dcun1d4 (ENSOKIG00005003806) #20	ociad2 (ENSOKIG00005003830) #22	ociad1 (ENSOKIG00005003845) ##23	fryl (ENSOKIG00005004077) #24	ENSOKIG00005008450	zar1 (ENSOKIG00005008460) #25	SLC10A4 (ENSOKIG00005008472) #26	slain2 (ENSOKIG00005008486) #27	anapc4 (ENSOKIG00005008651)	PALLD (ENSOKIG00005010206)	ENSOKIG00005010721	SH3RF1 (ENSOKIG00005010735)	NEK1 (ENSOKIG00005010834)	ENSOKIG00005010917	FBXL5 (ENSOKIG00005010930)	CC2D2A (ENSOKIG00005011011)	C1QTNF7 (ENSOKIG00005011354)
Rainbow trout	MODERN SPECIES	26	ENSOMYG00000005906 #8	ENSOMYG00000055731	pdgfra (ENSOMYG00000005391) #9	ENSOMYG00000005122	gsx2 (ENSOMYG00000005114) #10	ENSOMYG00000048305	ENSOMYG00000064916	lnx1 (ENSOMYG00000005078) #12	ENSOMYG00000017091	scfd2 (ENSOMYG00000004941) #14	rasl11b (ENSOMYG00000004952) #15	usp46 (ENSOMYG00000004784) #16	spata18 (ENSOMYG00000004567) #17	sgcb (ENSOMYG00000004528) #18	dcun1d4 (ENSOMYG00000004415) #20	ociad2 (ENSOMYG00000004247) #22	ociad1 (ENSOMYG00000004217) ##23	fryl (ENSOMYG00000003024) #24	zar1 (ENSOMYG00000002296) #25	SLC10A4 (ENSOMYG00000002262) #26	slain2 (ENSOMYG00000002235) #27	anapc4 (ENSOMYG00000002137)	PALLD (ENSOMYG00000001881)	ENSOMYG00000001778	SH3RF1 (ENSOMYG00000001738)	NEK1 (ENSOMYG00000001651)	ENSOMYG00000001465	FBXL5 (ENSOMYG00000001417)	CC2D2A (ENSOMYG00000001240)	C1QTNF7 (ENSOMYG00000001129)	CPEB2 (ENSOMYG00000036647)
Elephant shark	MODERN SPECIES	1510	srd5a3 (ENSCMIG00000013006)	kdr (ENSCMIG00000012774) #7	ENSCMIG00000012689 #8	pdgfra (ENSCMIG00000012550) #9	gsx2 (ENSCMIG00000012506) #10	CHIC2 (ENSCMIG00000012504) #11	LNX1 (ENSCMIG00000012496) #12	ENSCMIG00000012487	scfd2 (ENSCMIG00000012479) #14	rasl11b (ENSCMIG00000012475) #15	USP46 (ENSCMIG00000012383) #16	spata18 (ENSCMIG00000012353) #17	sgcb (ENSCMIG00000012345) #18	dcun1d4 (ENSCMIG00000012304) #20	CWH43 (ENSCMIG00000012282) #21	ENSCMIG00000012278 #22	OCIAD1 (ENSCMIG00000012271) #23	fryl (ENSCMIG00000011534) #24	ZAR1 (ENSCMIG00000011272) #25	SLC10A4 (ENSCMIG00000011270) #26	ENSCMIG00000011267 #26	ENSCMIG00000011245	slain2 (ENSCMIG00000011224) #27	tec (ENSCMIG00000011174) #28	ENSCMIG00000011110 ##28	ENSCMIG00000011095	NIPAL1 (ENSCMIG00000011093) #30	ENSCMIG00000011090	cnga1a (ENSCMIG00000011087) #31	ENSCMIG00000011061	NFXL1 (ENSCMIG00000010935) #32