Tetrapoda	ANCESTRAL SPECIES	20	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902	ENSGT00390000012030.b.a	ENSGT00390000012178	ENSGT00940000159568	ENSGT00940000163576	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00390000008820.f	ENSGT00940000159055	ENSGT01060000248594.e.a	ENSGT00940000159922.b	ENSGT00510000047493	ENSGT00950000183232	ENSGT00940000161570	ENSGT00940000156128.b	ENSGT00950000182988.a.b.b.b	ENSGT00940000160983
Amniota	ANCESTRAL SPECIES	107											ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000161180 #30	ENSGT00940000154363.A #31
Mammalia	ANCESTRAL SPECIES	95				ENSGT01100000263479.A ##8	ENSGT00730000111056 #12	ENSGT00990000204044	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00960000189159	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.e.b ##32	ENSGT00530000063351 #34	ENSGT00940000153599.B.a	ENSGT00940000160803	ENSGT00940000159046.C	ENSGT00940000162551	ENSGT00390000004140.a	ENSGT00510000048991
Theria	ANCESTRAL SPECIES	27				ENSGT01100000263479.A ##8	ENSGT00730000111056 #12	ENSGT00990000204044	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00960000189159	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f #32	ENSGT00940000161904 #33	ENSGT00530000063351.a #34	ENSGT00530000063351.b ##34	ENSGT00940000153599.B.a	ENSGT00940000160803	ENSGT00940000159046.C
Eutheria	ANCESTRAL SPECIES	29		ENSGT00530000063351.a.a ##34	ENSGT01100000263479.D.a #10	ENSGT00390000002861 #11	ENSGT00730000111056 #12	ENSGT00990000204044	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f #32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34	ENSGT00530000063351.b ##34	ENSGT00940000153599.B.a	ENSGT00940000160803	ENSGT00940000159046.C
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319 #7	ENSGT00730000111056 #12	ENSGT00990000204044	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f #32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34	ENSGT01100000263479.D.a #10	ENSGT00530000063351.a.a ##34	ENSGT00530000063351.b ##34	ENSGT00940000164580
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319 #7	ENSGT01100000263479.D.a.d ##8	ENSGT01100000263479.F ##8	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f #32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34	ENSGT01100000263479.D.a.c.b #10	ENSGT01100000263479.H ##8	ENSGT00990000204044	ENSGT00940000171483
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00390000006319 #7	ENSGT01100000263479.D.a.c.b #10	ENSGT00390000002861 #11	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f #32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34	ENSGT00530000063351.a.a.z ##34	ENSGT00530000063351.b ##34	ENSGT00940000164580	ENSGT00940000153599.B.a
Glires	ANCESTRAL SPECIES	6	ENSGT00390000006319 #7	ENSGT01100000263479.D.a.c.b #10	ENSGT00390000002861 #11	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f #32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34	ENSGT00530000063351.a.a.z ##34	ENSGT00530000063351.b ##34	ENSGT00940000164580	ENSGT00940000153599.B.a
Rodentia	ANCESTRAL SPECIES	8	ENSGT00390000006319 #7	ENSGT01100000263479.D.a.c.b.a.b ##8	ENSGT00390000002861 #11	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f #32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34	ENSGT01100000263479.D.a.c.b.b ##8	ENSGT00530000063351.a.a.z ##34	ENSGT00530000063351.b ##34	ENSGT00940000153599.B.a
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00390000006319 #7	ENSGT01100000263479.D.a.c.b.a.b ##8	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f #32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34	ENSGT00530000063351.a.a.z ##34	ENSGT01100000263479.A ##8	ENSGT00530000063351.a.a.y ##34	ENSGT00530000063351.b ##34
Myomorpha	ANCESTRAL SPECIES	20	ENSGT00940000160500	ENSGT00390000006319 #7	ENSGT01100000263479.D.a.c.b.a.b ##8	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f #32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00530000063351.a.a.z ##34	ENSGT01100000263479.A ##8	ENSGT00530000063351.a.a.y ##34
Muroidea	ANCESTRAL SPECIES	18	ENSGT00940000160500	ENSGT00390000006319 #7	ENSGT01100000263479.D.a.c.b.a.b ##8	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f.p ##32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00530000063351.a.a.z ##34	ENSGT00530000063351.a.a.y ##34	ENSGT00530000063351.b ##34
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00940000160500	ENSGT00390000006319 #7	ENSGT01100000263479.D.a.c.b.a.b ##8	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00960000192716 #23	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f.p ##32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00530000063351.a.a.z ##34	ENSGT00530000063351.a.a.y ##34
Cricetidae	ANCESTRAL SPECIES	26				ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00960000192716 #23	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f.o.b #32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34	ENSGT00530000063351.a.a.z ##34	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00390000006319 #7
Cricetidae_B	ANCESTRAL SPECIES	41	ENSGT00940000153599.B.a	ENSGT00530000063351.b ##34	ENSGT00530000063351.a.a.z ##34	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00390000002861 #11	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00960000192716 #23	ENSGT00940000160115 #24	ENSGT00940000161799 #25	ENSGT00940000158852 #26	ENSGT00940000160476 #27	ENSGT00390000010549 #28	ENSGT00940000163212.A #29	ENSGT00940000161180 #30	ENSGT00940000154363.A #31	ENSGT00390000013102.f.o.b #32	ENSGT00390000013102.f.p ##32	ENSGT00940000161904 #33	ENSGT00530000063351.a.b #34
Northern American deer mouse	MODERN SPECIES		Erich4 (ENSPEMG00000029662) #7	ENSPEMG00000031064 #8	ENSPEMG00000017731 #9	ENSPEMG00000012395 #10	Cxcl17 (ENSPEMG00000013212) #11	Lipe (ENSPEMG00000018430) #12	Cnfn (ENSPEMG00000008799) #13	Megf8 (ENSPEMG00000015992) #14	Tmem145 (ENSPEMG00000008836) #15	Prr19 (ENSPEMG00000017854) #16	Pafah1b3 (ENSPEMG00000009631) #17	Cic (ENSPEMG00000009522) #18	Erf (ENSPEMG00000015322) #19	Gsk3a (ENSPEMG00000009695) #20	Zfp526 (ENSPEMG00000000499) #21	Dedd2 (ENSPEMG00000029729) #22	ENSPEMG00000024366 #23	Pou2f2 (ENSPEMG00000019227) #24	Zfp574 (ENSPEMG00000016061) #25	Grik5 (ENSPEMG00000017219) #26	Atp1a3 (ENSPEMG00000011099) #27	Rabac1 (ENSPEMG00000002744) #28	Erfl (ENSPEMG00000018034) #29	Arhgef1 (ENSPEMG00000012222) #30	Cd79a (ENSPEMG00000015673) #31	Rps19 (ENSPEMG00000015926) #32	Dmrtc2 (ENSPEMG00000002536) #33	Lypd4 (ENSPEMG00000007549) #34	ENSPEMG00000029955 #35	ENSPEMG00000005613 #36	ENSPEMG00000031346 #37