Glires	ANCESTRAL SPECIES	6	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b #10	ENSGT00390000002861 #11	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.b ##32	ENSGT00940000164580	ENSGT00940000153599.B.a
Rodentia	ANCESTRAL SPECIES	8	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.D.a.c.b.b ##9	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.b ##32	ENSGT00940000153599.B.a
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT00530000063351.a.a.z ##32	ENSGT01100000263479.A ##9	ENSGT00530000063351.a.a.y ##32	ENSGT00530000063351.b ##32
Myomorpha	ANCESTRAL SPECIES	20	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00530000063351.a.a.z ##32	ENSGT01100000263479.A ##9	ENSGT00530000063351.a.a.y ##32
Muroidea	ANCESTRAL SPECIES	18	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f.p #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.a.a.y ##32	ENSGT00530000063351.b ##32
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00960000192716	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f.p #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.a.a.y ##32
Cricetidae	ANCESTRAL SPECIES	26				ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00960000192716	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f.o.b ##30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT00530000063351.a.a.z ##32	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00390000006319
Cricetidae_B	ANCESTRAL SPECIES	41	ENSGT00940000153599.B.a	ENSGT00530000063351.b ##32	ENSGT00530000063351.a.a.z ##32	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00390000002861 #11	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00960000192716	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f.o.b ##30	ENSGT00390000013102.f.p #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32
Prairie vole	MODERN SPECIES	354	Cyp2s1 (ENSMOCG00000019209) #7	ENSMOCG00000002001 #8	ENSMOCG00000017362 #9	ENSMOCG00000002667 #10	Cxcl17 (ENSMOCG00000013452) #11	Lipe (ENSMOCG00000004098) #12	Cnfn (ENSMOCG00000010534) #13	Megf8 (ENSMOCG00000009971) #14	Tmem145 (ENSMOCG00000011577) #15	Prr19 (ENSMOCG00000022197) #16	Pafah1b3 (ENSMOCG00000011582) #17	Cic (ENSMOCG00000012897) #18	Erf (ENSMOCG00000009581) #19	Gsk3a (ENSMOCG00000013617) #20	Zfp526 (ENSMOCG00000022993) #21	Dedd2 (ENSMOCG00000017087) #22	Pou2f2 (ENSMOCG00000015602) #23	Zfp574 (ENSMOCG00000016268) #24	Grik5 (ENSMOCG00000001917) #25	Atp1a3 (ENSMOCG00000015750) #26	Rabac1 (ENSMOCG00000002729) #27	ENSMOCG00000011140 #28	Arhgef1 (ENSMOCG00000009746) #29	Rps19 (ENSMOCG00000022408) #30	Dmrtc2 (ENSMOCG00000018292) #31	Lypd4 (ENSMOCG00000008530) #32	ENSMOCG00000015518 #33	Ethe1 (ENSMOCG00000006120) #34	Zfp575 (ENSMOCG00000017783) #35	Xrcc1 (ENSMOCG00000022521) #36	Pinlyp (ENSMOCG00000013333) #37
Northern American deer mouse	MODERN SPECIES		Erich4 (ENSPEMG00000029662)	ENSPEMG00000031064 ##9	ENSPEMG00000017731	ENSPEMG00000012395 #10	Cxcl17 (ENSPEMG00000013212) #11	Lipe (ENSPEMG00000018430) #12	Cnfn (ENSPEMG00000008799) #13	Megf8 (ENSPEMG00000015992) #14	Tmem145 (ENSPEMG00000008836) #15	Prr19 (ENSPEMG00000017854) #16	Pafah1b3 (ENSPEMG00000009631) #17	Cic (ENSPEMG00000009522) #18	Erf (ENSPEMG00000015322) #19	Gsk3a (ENSPEMG00000009695) #20	Zfp526 (ENSPEMG00000000499) #21	Dedd2 (ENSPEMG00000029729) #22	ENSPEMG00000024366	Pou2f2 (ENSPEMG00000019227) #23	Zfp574 (ENSPEMG00000016061) #24	Grik5 (ENSPEMG00000017219) #25	Atp1a3 (ENSPEMG00000011099) #26	Rabac1 (ENSPEMG00000002744) #27	Erfl (ENSPEMG00000018034)	Arhgef1 (ENSPEMG00000012222) #29	Cd79a (ENSPEMG00000015673)	Rps19 (ENSPEMG00000015926) ##30	Dmrtc2 (ENSPEMG00000002536) #31	Lypd4 (ENSPEMG00000007549) #32	ENSPEMG00000029955 ##9	ENSPEMG00000005613	ENSPEMG00000031346
Cricetinae	ANCESTRAL SPECIES	34			ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f.o.b ##30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT00530000063351.a.a.z ##32	ENSGT00390000006319	ENSGT00940000160500	ENSGT00940000161895
Golden Hamster	MODERN SPECIES	863			ENSMAUG00000000868 #10	Cxcl17 (ENSMAUG00000016706) #11	ENSMAUG00000004744	Lipe (ENSMAUG00000004660) #12	Cnfn (ENSMAUG00000021910) #13	Megf8 (ENSMAUG00000017117) #14	Tmem145 (ENSMAUG00000012415) #15	Prr19 (ENSMAUG00000005563) #16	Pafah1b3 (ENSMAUG00000009456) #17	Cic (ENSMAUG00000001079) #18	Erf (ENSMAUG00000008527) #19	Gsk3a (ENSMAUG00000014364) #20	Zfp526 (ENSMAUG00000016121) #21	Dedd2 (ENSMAUG00000014233) #22	Pou2f2 (ENSMAUG00000010807) #23	Zfp574 (ENSMAUG00000018252) #24	Grik5 (ENSMAUG00000004340) #25	Erfl (ENSMAUG00000020529)	Arhgef1 (ENSMAUG00000013887) #29	ENSMAUG00000011201 ##30	Dmrtc2 (ENSMAUG00000016876) #31	Lypd4 (ENSMAUG00000012812) #32	Cd177 (ENSMAUG00000013142) ##32
Chinese hamster chok1gshd	MODERN SPECIES	295				Cxcl17 (ENSCGRG00001017481) #11	ENSCGRG00001023649	Lipe (ENSCGRG00001001445) #12	Cnfn (ENSCGRG00001021600) #13	Megf8 (ENSCGRG00001015887) #14	Tmem145 (ENSCGRG00001023312) #15	Prr19 (ENSCGRG00001013680) #16	Pafah1b3 (ENSCGRG00001008696) #17	Cic (ENSCGRG00001017203) #18	Erf (ENSCGRG00001022509) #19	Gsk3a (ENSCGRG00001015543) #20	Zfp526 (ENSCGRG00001008967) #21	Dedd2 (ENSCGRG00001011876) #22	Pou2f2 (ENSCGRG00001013142) #23	Zfp574 (ENSCGRG00001001429) #24	Grik5 (ENSCGRG00001001142) #25	Atp1a3 (ENSCGRG00001010759) #26	Rabac1 (ENSCGRG00001021463) #27	Erfl (ENSCGRG00001017704)	Arhgef1 (ENSCGRG00001000673) #29	Cd79a (ENSCGRG00001018881)	ENSCGRG00001017202 ##30	Dmrtc2 (ENSCGRG00001016626) #31	Lypd4 (ENSCGRG00001023965) #32	Erich4 (ENSCGRG00001023074)	Dmac2 (ENSCGRG00001017864)	B3gnt8 (ENSCGRG00001010163)	Bckdha (ENSCGRG00001018437)
Murinae	ANCESTRAL SPECIES	19	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00960000192716	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f.p #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.a.a.y.a.a.a ##32
Mus	ANCESTRAL SPECIES		ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00960000192716	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f.p #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.a.a.y.a.a.a ##32
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00960000192716	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f.p #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.a.a.y.a.a.a ##32
Mus_B	ANCESTRAL SPECIES		ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00960000192716	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f.p #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT00530000063351.a.a.y.a.a.b ##32	ENSGT00530000063351.b ##32	ENSGT00940000153599.B.a
Mouse	MODERN SPECIES	16	Dmac2 (ENSMUSG00000057229)	Erich4 (ENSMUSG00000074261)	Ceacam2 (ENSMUSG00000054385) ##9	Ceacam1 (ENSMUSG00000074272) ##9	Cxcl17 (ENSMUSG00000060188) #11	Lipe (ENSMUSG00000003123) #12	Cnfn (ENSMUSG00000063651) #13	Megf8 (ENSMUSG00000045039) #14	Tmem145 (ENSMUSG00000043843) #15	Prr19 (ENSMUSG00000058741) #16	Pafah1b3 (ENSMUSG00000005447) #17	Cic (ENSMUSG00000005442) #18	Erf (ENSMUSG00000040857) #19	Gsk3a (ENSMUSG00000057177) #20	Zfp526 (ENSMUSG00000046541) #21	Dedd2 (ENSMUSG00000054499) #22	Pou2f2 (ENSMUSG00000008496) #23	Zfp574 (ENSMUSG00000045252) #24	Grik5 (ENSMUSG00000003378) #25	Atp1a3 (ENSMUSG00000040907) #26	Rabac1 (ENSMUSG00000003380) #27	Erfl (ENSMUSG00000108367)	Arhgef1 (ENSMUSG00000040940) #29	Cd79a (ENSMUSG00000003379)	Rps19 (ENSMUSG00000040952) #30	Dmrtc2 (ENSMUSG00000011349) #31	Lypd4 (ENSMUSG00000062732) #32	Tmsb10b (ENSMUSG00000091955)	Ceacam10 (ENSMUSG00000054169) #10	Cd177 (ENSMUSG00000052212) ##32	Lypd11 (ENSMUSG00000058717) ##32
Mus_C	ANCESTRAL SPECIES	15	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00960000192716	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f.p #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.A ##9	ENSGT00530000063351.a.a.y.a.a.a ##32	ENSGT00530000063351.a.a.z ##32
Steppe mouse	MODERN SPECIES	2675			ENSMSIG00000012187 #11	ENSMSIG00000012175	Lipe (ENSMSIG00000012081) #12	Cnfn (ENSMSIG00000012052) #13	Megf8 (ENSMSIG00000012015) #14	Tmem145 (ENSMSIG00000011940) #15	ENSMSIG00000011932 #16	Pafah1b3 (ENSMSIG00000011919) #17	Cic (ENSMSIG00000011872) #18	Erf (ENSMSIG00000011854) #19	ENSMSIG00000011846	Gsk3a (ENSMSIG00000011808) #20	Zfp526 (ENSMSIG00000011798) #21	Dedd2 (ENSMSIG00000011774) #22	ENSMSIG00000011759	Pou2f2 (ENSMSIG00000010661) #23	Zfp574 (ENSMSIG00000010639) #24	ENSMSIG00000010626	Grik5 (ENSMSIG00000010580) #25	Atp1a3 (ENSMSIG00000010376) #26	ENSMSIG00000010352 #27	Erfl (ENSMSIG00000010340)	Arhgef1 (ENSMSIG00000009574) #29	Cd79a (ENSMSIG00000009558)	ENSMSIG00000009499 #30	Dmrtc2 (ENSMSIG00000009458) #31	Lypd4 (ENSMSIG00000009428) #32	ENSMSIG00000009400 ##9	ENSMSIG00000009382 ##9
spretus	MODERN SPECIES	16	B3gnt8 (MGP_SPRETEiJ_G0030470)	Dmac2 (MGP_SPRETEiJ_G0030469)	Erich4 (MGP_SPRETEiJ_G0030468)	MGP_SPRETEiJ_G0030467	Cxcl17 (MGP_SPRETEiJ_G0030466) #11	Lipe (MGP_SPRETEiJ_G0030465) #12	Cnfn (MGP_SPRETEiJ_G0030464) #13	Megf8 (MGP_SPRETEiJ_G0030463) #14	Tmem145 (MGP_SPRETEiJ_G0030462) #15	Prr19 (MGP_SPRETEiJ_G0030461) #16	Pafah1b3 (MGP_SPRETEiJ_G0030460) #17	Cic (MGP_SPRETEiJ_G0030459) #18	Erf (MGP_SPRETEiJ_G0030458) #19	Gsk3a (MGP_SPRETEiJ_G0030457) #20	Zfp526 (MGP_SPRETEiJ_G0030456) #21	Dedd2 (MGP_SPRETEiJ_G0030455) #22	Pou2f2 (MGP_SPRETEiJ_G0030454) #23	Zfp574 (MGP_SPRETEiJ_G0030453) #24	Grik5 (MGP_SPRETEiJ_G0030452) #25	Atp1a3 (MGP_SPRETEiJ_G0030451) #26	Rabac1 (MGP_SPRETEiJ_G0030450) #27	Arhgef1 (MGP_SPRETEiJ_G0030448) #29	Cd79a (MGP_SPRETEiJ_G0030447)	MGP_SPRETEiJ_G0030446 #30	Dmrtc2 (MGP_SPRETEiJ_G0030445) #31	Lypd4 (MGP_SPRETEiJ_G0030444) #32	MGP_SPRETEiJ_G0030443 ##9	Cd177 (MGP_SPRETEiJ_G0030442) ##32	Lypd11 (MGP_SPRETEiJ_G0030441) ##32	MGP_SPRETEiJ_G0030440	Tex101 (MGP_SPRETEiJ_G0030439) ##32
Ryukyu mouse	MODERN SPECIES	16	Dmac2 (MGP_CAROLIEiJ_G0029373)	Erich4 (MGP_CAROLIEiJ_G0029372)	MGP_CAROLIEiJ_G0029371 ##9	MGP_CAROLIEiJ_G0029370 ##9	Cxcl17 (MGP_CAROLIEiJ_G0029369) #11	Lipe (MGP_CAROLIEiJ_G0029368) #12	Cnfn (MGP_CAROLIEiJ_G0029367) #13	Megf8 (MGP_CAROLIEiJ_G0029366) #14	Tmem145 (MGP_CAROLIEiJ_G0029365) #15	Prr19 (MGP_CAROLIEiJ_G0029364) #16	Pafah1b3 (MGP_CAROLIEiJ_G0029363) #17	Cic (MGP_CAROLIEiJ_G0029362) #18	Erf (MGP_CAROLIEiJ_G0029361) #19	Gsk3a (MGP_CAROLIEiJ_G0029360) #20	Zfp526 (MGP_CAROLIEiJ_G0029359) #21	Dedd2 (MGP_CAROLIEiJ_G0029358) #22	Pou2f2 (MGP_CAROLIEiJ_G0029357) #23	Zfp574 (MGP_CAROLIEiJ_G0029356) #24	Grik5 (MGP_CAROLIEiJ_G0029355) #25	Atp1a3 (MGP_CAROLIEiJ_G0029354) #26	Rabac1 (MGP_CAROLIEiJ_G0029353) #27	Arhgef1 (MGP_CAROLIEiJ_G0029351) #29	Cd79a (MGP_CAROLIEiJ_G0029350)	MGP_CAROLIEiJ_G0029349 #30	Dmrtc2 (MGP_CAROLIEiJ_G0029348) #31	Lypd4 (MGP_CAROLIEiJ_G0029347) #32	Ceacam10 (MGP_CAROLIEiJ_G0029346) #10	Tex101 (MGP_CAROLIEiJ_G0029345) ##32	Lypd3 (MGP_CAROLIEiJ_G0029344)	Phldb3 (MGP_CAROLIEiJ_G0029343) #33	Ethe1 (MGP_CAROLIEiJ_G0029342) #34
Shrew mouse	MODERN SPECIES	10	Dmac2 (MGP_PahariEiJ_G0021226)	Erich4 (MGP_PahariEiJ_G0021225)	MGP_PahariEiJ_G0021224 ##9	MGP_PahariEiJ_G0021223 ##9	Cxcl17 (MGP_PahariEiJ_G0021222) #11	Lipe (MGP_PahariEiJ_G0021221) #12	Cnfn (MGP_PahariEiJ_G0021220) #13	Megf8 (MGP_PahariEiJ_G0021219) #14	Tmem145 (MGP_PahariEiJ_G0021218) #15	Prr19 (MGP_PahariEiJ_G0021217) #16	Pafah1b3 (MGP_PahariEiJ_G0021216) #17	Cic (MGP_PahariEiJ_G0021215) #18	Erf (MGP_PahariEiJ_G0021214) #19	Gsk3a (MGP_PahariEiJ_G0021213) #20	Zfp526 (MGP_PahariEiJ_G0021212) #21	Dedd2 (MGP_PahariEiJ_G0021211) #22	Pou2f2 (MGP_PahariEiJ_G0021210) #23	Zfp574 (MGP_PahariEiJ_G0021209) #24	Grik5 (MGP_PahariEiJ_G0021208) #25	Atp1a3 (MGP_PahariEiJ_G0021207) #26	MGP_PahariEiJ_G0021206 #27	Arhgef1 (MGP_PahariEiJ_G0021204) #29	Cd79a (MGP_PahariEiJ_G0021203)	MGP_PahariEiJ_G0021202 ##30	Dmrtc2 (MGP_PahariEiJ_G0021201) #31	Lypd4 (MGP_PahariEiJ_G0021200) #32	Ceacam10 (MGP_PahariEiJ_G0021199) #10	Cd177 (MGP_PahariEiJ_G0021198) ##32	Tex101 (MGP_PahariEiJ_G0021196) ##32	Lypd3 (MGP_PahariEiJ_G0021195)	Phldb3 (MGP_PahariEiJ_G0021194) #33
Rat	MODERN SPECIES		Dmac2 (ENSRNOG00000020596)	Erich4 (ENSRNOG00000037798)	Ceacam1 (ENSRNOG00000020578) #10	Cxcl17 (ENSRNOG00000037814) #11	AC121639.1 (ENSRNOG00000020538)	Lipe (ENSRNOG00000020546) #12	Cnfn (ENSRNOG00000020530) #13	Megf8 (ENSRNOG00000052687) #14	Tmem145 (ENSRNOG00000020489) #15	Prr19 (ENSRNOG00000043154) #16	Pafah1b3 (ENSRNOG00000020481) #17	Cic (ENSRNOG00000056118) #18	Erf (ENSRNOG00000020426) #19	Gsk3a (ENSRNOG00000020417) #20	Zfp526 (ENSRNOG00000047526) #21	Dedd2 (ENSRNOG00000046112) #22	Pou2f2 (ENSRNOG00000055650) #23	Zfp574 (ENSRNOG00000055761) #24	Grik5 (ENSRNOG00000020310) #25	Atp1a3 (ENSRNOG00000020263) #26	Rabac1 (ENSRNOG00000020233) #27	Erfl (ENSRNOG00000068986)	Arhgef1 (ENSRNOG00000020130) #29	Cd79a (ENSRNOG00000020125)	Rps19 (ENSRNOG00000037897) #30	Dmrtc2 (ENSRNOG00000020109) #31	Lypd4 (ENSRNOG00000020098) #32	Ceacam6 (ENSRNOG00000030331) ##9	Ceacam4 (ENSRNOG00000046222) #10	Cd177 (ENSRNOG00000022669) ##32	Lypd10 (ENSRNOG00000047176) ##32
Upper Galilee mountains blind mole rat	MODERN SPECIES	1327				ENSNGAG00000024225 ##9	Lipe (ENSNGAG00000023105) #12	Cnfn (ENSNGAG00000005377) #13	Megf8 (ENSNGAG00000014330) #14	Tmem145 (ENSNGAG00000007684) #15	Prr19 (ENSNGAG00000012197) #16	Pafah1b3 (ENSNGAG00000017511) #17	ENSNGAG00000020734	ENSNGAG00000014614 #18	Erf (ENSNGAG00000005013) #19	Gsk3a (ENSNGAG00000018555) #20	Zfp526 (ENSNGAG00000018114) #21	Dedd2 (ENSNGAG00000021900) #22	Pou2f2 (ENSNGAG00000021598) #23	Zfp574 (ENSNGAG00000001555) #24	Grik5 (ENSNGAG00000024062) #25	Atp1a3 (ENSNGAG00000012235) #26	Rabac1 (ENSNGAG00000024184) #27	Erfl (ENSNGAG00000024008)	Arhgef1 (ENSNGAG00000004918) #29	Cd79a (ENSNGAG00000016621)	ENSNGAG00000023087	ENSNGAG00000015795 ##30	ENSNGAG00000015634 #32	Dmrtc2 (ENSNGAG00000006066) #31
Lesser Egyptian jerboa	MODERN SPECIES	186	Ethe1 (ENSJJAG00000013800) #34	ENSJJAG00000013197 #33	Lypd3 (ENSJJAG00000012768)	ENSJJAG00000016385 ##9	ENSJJAG00000015232	ENSJJAG00000014623 #12	Cnfn (ENSJJAG00000013769) #13	ENSJJAG00000013061 #14	Tmem145 (ENSJJAG00000012149) #15	Prr19 (ENSJJAG00000011188) #16	Pafah1b3 (ENSJJAG00000010925) #17	Cic (ENSJJAG00000004156) #18	Erf (ENSJJAG00000000412) #19	Gsk3a (ENSJJAG00000000137) #20	Zfp526 (ENSJJAG00000014793) #21	ENSJJAG00000022418 #22	Pou2f2 (ENSJJAG00000022155) #23	Zfp574 (ENSJJAG00000021785) #24	Grik5 (ENSJJAG00000015626) #25	Atp1a3 (ENSJJAG00000012190) #26	Erfl (ENSJJAG00000003327)	Arhgef1 (ENSJJAG00000019422) #29	Cd79a (ENSJJAG00000016983)	ENSJJAG00000016317 #30	Dmrtc2 (ENSJJAG00000016059) #31	Lypd4 (ENSJJAG00000015698) #32	Erich4 (ENSJJAG00000015588)	Dmac2 (ENSJJAG00000015253)	B3gnt8 (ENSJJAG00000013842)	Bckdha (ENSJJAG00000014599)	Exosc5 (ENSJJAG00000013914)
Kangaroo rat	MODERN SPECIES	475	Xrcc1 (ENSDORG00000006108) #36	Ethe1 (ENSDORG00000002169) #34	Phldb3 (ENSDORG00000002164) #33	Lypd3 (ENSDORG00000010164)	ENSDORG00000006243 ##9	Lipe (ENSDORG00000007951) #12	Cnfn (ENSDORG00000007950) #13	Megf8 (ENSDORG00000007946) #14	Tmem145 (ENSDORG00000007941) #15	Prr19 (ENSDORG00000007940) #16	Pafah1b3 (ENSDORG00000008817) #17	Cic (ENSDORG00000008822) #18	Erf (ENSDORG00000008823) #19	Gsk3a (ENSDORG00000008826) #20	Zfp526 (ENSDORG00000024798) #21	Dedd2 (ENSDORG00000026250) #22	Pou2f2 (ENSDORG00000025719) #23	Zfp574 (ENSDORG00000009702) #24	Grik5 (ENSDORG00000013438) #25	Atp1a3 (ENSDORG00000006771) #26	Rabac1 (ENSDORG00000006773) #27	Erfl (ENSDORG00000024424)	Arhgef1 (ENSDORG00000010815) #29	Cd79a (ENSDORG00000010814)	ENSDORG00000010812 ##30	Dmrtc2 (ENSDORG00000010810) #31	ENSDORG00000026563	Ttc9b (ENSDORG00000023658)	Akt2 (ENSDORG00000003591)	2310022A10Rik (ENSDORG00000012625)	Pld3 (ENSDORG00000011428)
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.D.a.c.b.b ##9	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.b ##32	ENSGT00940000153599.B.a
Sciuridae	ANCESTRAL SPECIES	5	ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.e.b ##30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.D.a.c.b.b.a ##9	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.b ##32	ENSGT00940000153599.B.a
Marmotini	ANCESTRAL SPECIES	7	ENSGT01100000263479.D.a.c.b.b.b ##9	ENSGT01100000263479.D.a.c.b.a.b ##9	ENSGT00390000002861 #11	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.D.a.c.b.b.a ##9	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.b ##32	ENSGT00940000153599.B.a
Marmotini_b	ANCESTRAL SPECIES	49		ENSGT01100000263479.D.a.c.b.a.a #10	ENSGT00390000002861 #11	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT01100000263479.D.a.c.b.b.a ##9	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.b ##32	ENSGT00940000153599.B.a
Arctic ground squirrel	MODERN SPECIES	297		ENSUPAG00010001516 #10	CXCL17 (ENSUPAG00010001506) #11	ENSUPAG00010001502	ENSUPAG00010001487	LIPE (ENSUPAG00010001422) #12	CNFN (ENSUPAG00010001399) #13	MEGF8 (ENSUPAG00010001326) #14	TMEM145 (ENSUPAG00010001258) #15	PRR19 (ENSUPAG00010001251) #16	PAFAH1B3 (ENSUPAG00010001213) #17	CIC (ENSUPAG00010000939) #18	ERF (ENSUPAG00010000918) #19	GSK3A (ENSUPAG00010000883) #20	ZNF526 (ENSUPAG00010000881) #21	DEDD2 (ENSUPAG00010000870) #22	POU2F2 (ENSUPAG00010000238) #23	ZNF574 (ENSUPAG00010000222) #24	GRIK5 (ENSUPAG00010000202) #25	ATP1A3 (ENSUPAG00010000095) #26	RABAC1 (ENSUPAG00010000053) #27	ERFL (ENSUPAG00010021971)	ARHGEF1 (ENSUPAG00010021957) #29	CD79A (ENSUPAG00010021954)	RPS19 (ENSUPAG00010021947) #30	DMRTC2 (ENSUPAG00010021944) #31	LYPD4 (ENSUPAG00010021943) #32	ENSUPAG00010021938 ##9	ENSUPAG00010021937 ##32	TEX101 (ENSUPAG00010021935) ##32	LYPD3 (ENSUPAG00010021933)
Squirrel	MODERN SPECIES	306					CXCL17 (ENSSTOG00000011599) #11	Lipe (ENSSTOG00000011564) #12	CNFN (ENSSTOG00000020414) #13	MEGF8 (ENSSTOG00000000868) #14	TMEM145 (ENSSTOG00000022861) #15	PRR19 (ENSSTOG00000024823) #16	PAFAH1B3 (ENSSTOG00000000864) #17	CIC (ENSSTOG00000000852) #18	ERF (ENSSTOG00000000849) #19	GSK3A (ENSSTOG00000000841) #20	ZNF526 (ENSSTOG00000019390) #21	DEDD2 (ENSSTOG00000020972) #22	POU2F2 (ENSSTOG00000021390) #23	ZNF574 (ENSSTOG00000028612) #24	GRIK5 (ENSSTOG00000011995) #25	ATP1A3 (ENSSTOG00000004030) #26	RABAC1 (ENSSTOG00000022795) #27	ENSSTOG00000032462 #19	ARHGEF1 (ENSSTOG00000003526) #29	CD79A (ENSSTOG00000003518)	ENSSTOG00000003502 ##30	DMRTC2 (ENSSTOG00000003484) #31	LYPD3 (ENSSTOG00000003599)	ENSSTOG00000028708 #33	ETHE1 (ENSSTOG00000023958) #34	XRCC1 (ENSSTOG00000019809) #36	ZNF575 (ENSSTOG00000011869) #35
Alpin marmot	MODERN SPECIES	45	ENSMMMG00000018966 ##9	CXCL17 (ENSMMMG00000018960) #11	ENSMMMG00000018958	ENSMMMG00000018948	LIPE (ENSMMMG00000018935) #12	CNFN (ENSMMMG00000018928) #13	MEGF8 (ENSMMMG00000018897) #14	TMEM145 (ENSMMMG00000018870) #15	ENSMMMG00000018865	PRR19 (ENSMMMG00000018862) #16	PAFAH1B3 (ENSMMMG00000018822) #17	CIC (ENSMMMG00000018746) #18	ERF (ENSMMMG00000018735) #19	GSK3A (ENSMMMG00000018714) #20	ZNF526 (ENSMMMG00000018710) #21	DEDD2 (ENSMMMG00000018702) #22	POU2F2 (ENSMMMG00000018186) #23	ZNF574 (ENSMMMG00000018163) #24	GRIK5 (ENSMMMG00000018145) #25	ATP1A3 (ENSMMMG00000018094) #26	RABAC1 (ENSMMMG00000018088) #27	ERFL (ENSMMMG00000018083)	ARHGEF1 (ENSMMMG00000016411) #29	CD79A (ENSMMMG00000016388)	RPS19 (ENSMMMG00000016380) ##30	DMRTC2 (ENSMMMG00000016375) #31	LYPD4 (ENSMMMG00000016374) #32	ENSMMMG00000016289 ##9	CD177 (ENSMMMG00000016255) ##32	TEX101 (ENSMMMG00000016239) ##32	LYPD3 (ENSMMMG00000016227)
Eurasian red squirrel	MODERN SPECIES	8	ENSSVLG00005023751 #10	ENSSVLG00005024022	ENSSVLG00005024078 ##9	CXCL17 (ENSSVLG00005024192) #11	ENSSVLG00005024214	LIPE (ENSSVLG00005024237) #12	CNFN (ENSSVLG00005024319) #13	MEGF8 (ENSSVLG00005024356) #14	TMEM145 (ENSSVLG00005024411) #15	PRR19 (ENSSVLG00005024445) #16	PAFAH1B3 (ENSSVLG00005024469) #17	CIC (ENSSVLG00005024515) #18	ERF (ENSSVLG00005024686) #19	GSK3A (ENSSVLG00005024717) #20	ZNF526 (ENSSVLG00005024751) #21	DEDD2 (ENSSVLG00005024774) #22	POU2F2 (ENSSVLG00005024957) #23	ZNF574 (ENSSVLG00005025008) #24	GRIK5 (ENSSVLG00005025036) #25	ATP1A3 (ENSSVLG00005025087) #26	RABAC1 (ENSSVLG00005025214) #27	ERFL (ENSSVLG00005025238)	ARHGEF1 (ENSSVLG00005025285) #29	CD79A (ENSSVLG00005025331)	RPS19 (ENSSVLG00005025346) ##30	DMRTC2 (ENSSVLG00005025370) #31	LYPD4 (ENSSVLG00005025397) #32	ENSSVLG00005025430 ##9	CD177 (ENSSVLG00005025475) ##32	TEX101 (ENSSVLG00005025538) ##32	LYPD3 (ENSSVLG00005025547)
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.b ##9	ENSGT00390000002861 #11	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.b ##32	ENSGT00940000153599.B.a	ENSGT00940000160803 #33
Naked mole-rat female	MODERN SPECIES	21	B3GNT8 (ENSHGLG00000010364)	ERICH4 (ENSHGLG00000048703)	ENSHGLG00000011199 ##9	ENSHGLG00000009638 #11	ATP5SL (ENSHGLG00000039004)	LIPE (ENSHGLG00000002222) #12	CNFN (ENSHGLG00000046457) #13	MEGF8 (ENSHGLG00000010524) #14	TMEM145 (ENSHGLG00000010011) #15	PRR19 (ENSHGLG00000003163) #16	PAFAH1B3 (ENSHGLG00000003652) #17	CIC (ENSHGLG00000019229) #18	ERF (ENSHGLG00000003539) #19	GSK3A (ENSHGLG00000004094) #20	ZNF526 (ENSHGLG00000002054) #21	DEDD2 (ENSHGLG00000002113) #22	POU2F2 (ENSHGLG00000002691) #23	ZNF574 (ENSHGLG00000003903) #24	GRIK5 (ENSHGLG00000004011) #25	ATP1A3 (ENSHGLG00000004227) #26	RABAC1 (ENSHGLG00000006853) #27	ERFL (ENSHGLG00000002910)	ARHGEF1 (ENSHGLG00000003059) #29	CD79A (ENSHGLG00000001725)	ENSHGLG00000040845	ENSHGLG00000050295 #30	ENSHGLG00000002035 #31	LYPD4 (ENSHGLG00000002114) #32	ENSHGLG00000045941	ENSHGLG00000002138	ENSHGLG00000033997 ##9
Hystricomorpha_a	ANCESTRAL SPECIES	39	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.a ##9	ENSGT00390000002861 #11	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.b ##32	ENSGT00940000153599.B.a	ENSGT00940000160803 #33
Hystricomorpha_b	ANCESTRAL SPECIES	49	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.a ##9	ENSGT00390000002861 #11	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24	ENSGT00940000158852 #25	ENSGT00940000160476 #26	ENSGT00390000010549 #27	ENSGT00940000163212.A	ENSGT00940000161180 #29	ENSGT00940000154363.A	ENSGT00390000013102.f #30	ENSGT00940000161904 #31	ENSGT00530000063351.a.b #32	ENSGT00530000063351.a.a.z ##32	ENSGT00530000063351.b ##32	ENSGT00940000153599.B.a	ENSGT00940000160803 #33
Long-tailed chinchilla	MODERN SPECIES	262	B3GNT8 (ENSCLAG00000001017)	DMAC2 (ENSCLAG00000001090)	ERICH4 (ENSCLAG00000000843)	ENSCLAG00000001267 ##9	CXCL17 (ENSCLAG00000001312) #11	LIPE (ENSCLAG00000001355) #12	CNFN (ENSCLAG00000001511) #13	MEGF8 (ENSCLAG00000002648) #14	TMEM145 (ENSCLAG00000003087) #15	PRR19 (ENSCLAG00000000685) #16	PAFAH1B3 (ENSCLAG00000000723) #17	CIC (ENSCLAG00000000862) #18	ERF (ENSCLAG00000002511) #19	GSK3A (ENSCLAG00000002825) #20	ZNF526 (ENSCLAG00000002951) #21	DEDD2 (ENSCLAG00000002983) #22	POU2F2 (ENSCLAG00000004593) #23	ZNF574 (ENSCLAG00000006252) #24	GRIK5 (ENSCLAG00000006835) #25	ATP1A3 (ENSCLAG00000001351) #26	RABAC1 (ENSCLAG00000001671) #27	ERFL (ENSCLAG00000001752)	ENSCLAG00000001895 #29	CD79A (ENSCLAG00000001020)	RPS19 (ENSCLAG00000001110) #30	DMRTC2 (ENSCLAG00000001131) #31	LYPD4 (ENSCLAG00000001144) #32	TEX101 (ENSCLAG00000001178) ##32	ENSCLAG00000001219	LYPD3 (ENSCLAG00000001283)	PHLDB3 (ENSCLAG00000001550) #33
Degu	MODERN SPECIES	238		ENSODEG00000010092 ##9	ENSODEG00000010781 ##9	ENSODEG00000019766	CXCL17 (ENSODEG00000010054) #11	LIPE (ENSODEG00000009773) #12	CNFN (ENSODEG00000010917) #13	MEGF8 (ENSODEG00000010413) #14	TMEM145 (ENSODEG00000010150) #15	PRR19 (ENSODEG00000009341) #16	PAFAH1B3 (ENSODEG00000011390) #17	CIC (ENSODEG00000011664) #18	ERF (ENSODEG00000009178) #19	GSK3A (ENSODEG00000014312) #20	ZNF526 (ENSODEG00000019954) #21	DEDD2 (ENSODEG00000010982) #22	POU2F2 (ENSODEG00000011310) #23	ZNF574 (ENSODEG00000013318) #24	GRIK5 (ENSODEG00000012165) #25	ATP1A3 (ENSODEG00000009220) #26	RABAC1 (ENSODEG00000008871) #27	ERFL (ENSODEG00000009283)	ARHGEF1 (ENSODEG00000009700) #29	CD79A (ENSODEG00000009588)	RPS19 (ENSODEG00000009249) ##30	DMRTC2 (ENSODEG00000009170) #31	LYPD4 (ENSODEG00000009945) #32	ENSODEG00000009641 ##32	ENSODEG00000009652	ENSODEG00000008792	LYPD3 (ENSODEG00000009353)
Guinea pig	MODERN SPECIES	80	ENSCPOG00000008853	ENSCPOG00000030322 ##9	ENSCPOG00000012967	ENSCPOG00000007329 ##9	CXCL17 (ENSCPOG00000039366) #11	LIPE (ENSCPOG00000020887) #12	CNFN (ENSCPOG00000034761) #13	MEGF8 (ENSCPOG00000012979) #14	TMEM145 (ENSCPOG00000012974) #15	PRR19 (ENSCPOG00000024016) #16	PAFAH1B3 (ENSCPOG00000004397) #17	CIC (ENSCPOG00000004391) #18	ENSCPOG00000001808 #19	GSK3A (ENSCPOG00000026896) #20	ZNF526 (ENSCPOG00000034474) #21	DEDD2 (ENSCPOG00000019827) #22	POU2F2 (ENSCPOG00000000781) #23	ZNF574 (ENSCPOG00000000780) #24	GRIK5 (ENSCPOG00000018909) #25	ATP1A3 (ENSCPOG00000010576) #26	RABAC1 (ENSCPOG00000021982) #27	ENSCPOG00000031488 #29	ENSCPOG00000034092 #29	CD79A (ENSCPOG00000011889)	RPS19 (ENSCPOG00000025140) #30	DMRTC2 (ENSCPOG00000001805) #31	LYPD4 (ENSCPOG00000001804) #32	ENSCPOG00000030020 ##32	TEX101 (ENSCPOG00000000483) ##32	LYPD3 (ENSCPOG00000002284)	ENSCPOG00000020180 #33
Lagomorpha	ANCESTRAL SPECIES	152	ENSGT00390000006319	ENSGT00940000160500	ENSGT01100000263479.D.a.c.a ##9	ENSGT00390000002861 #11	ENSGT00990000204044	ENSGT00730000111056 #12	ENSGT00940000161202.b #13	ENSGT00940000160262 #14	ENSGT00940000153981.B #15	ENSGT00390000010703 #16	ENSGT00950000183199.a.b #17	ENSGT00940000159960 #18	ENSGT00940000157292 #19	ENSGT00520000055635.c.b #20	ENSGT00940000162624 #21	ENSGT00390000008714.b #22	ENSGT00940000160115 #23	ENSGT00940000161799 #24
Rabbit	MODERN SPECIES	522	ERICH4 (ENSOCUG00000029714)	DMAC2 (ENSOCUG00000029322)	ENSOCUG00000008689 ##9	CXCL17 (ENSOCUG00000021666) #11	ENSOCUG00000035805	LIPE (ENSOCUG00000000017) #12	CNFN (ENSOCUG00000006494) #13	ENSOCUG00000006479 #14	TMEM145 (ENSOCUG00000004380) #15	PRR19 (ENSOCUG00000023652) #16	PAFAH1B3 (ENSOCUG00000006470) #17	CIC (ENSOCUG00000006458) #18	ERF (ENSOCUG00000039541) #19	GSK3A (ENSOCUG00000006441) #20	ZNF526 (ENSOCUG00000029615) #21	DEDD2 (ENSOCUG00000006435) #22	POU2F2 (ENSOCUG00000021776) #23	ZNF574 (ENSOCUG00000037409) #24
Pika	MODERN SPECIES	2615														GSK3A (ENSOPRG00000010851) #20	ZNF526 (ENSOPRG00000010847) #21	DEDD2 (ENSOPRG00000010833) #22