Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT01030000235549	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b ##24	ENSGT00940000153201.j.k.a.b ##24	ENSGT01030000235549	ENSGT00940000153201.j.l #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00910000147241	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Glires	ANCESTRAL SPECIES	1	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00910000147241	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Rodentia	ANCESTRAL SPECIES	1	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00910000147241	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.a.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e ##24	ENSGT00390000015066 #25	ENSGT00940000170775 #26	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00910000147241	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.a.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e ##24	ENSGT00390000015066 #25	ENSGT00940000170775 #26	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.p	ENSGT00390000004737.a	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Myomorpha	ANCESTRAL SPECIES	13	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00910000147241	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.a.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01040000242986	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e ##24	ENSGT00390000015066 #25	ENSGT00940000170775 #26	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.p	ENSGT00390000004737.a	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Muroidea	ANCESTRAL SPECIES	65	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00910000147241	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.a.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01040000242986	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e ##24	ENSGT00390000015066 #25	ENSGT00940000170775 #26	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Muroidea_A	ANCESTRAL SPECIES		ENSGT00910000147241	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01040000242986	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e ##24	ENSGT00390000015066 #25	ENSGT00940000170775 #26	ENSGT00940000155818 #27	ENSGT00390000004737.a	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Cricetidae	ANCESTRAL SPECIES	34	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.b.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.b.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000246786 #19	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e ##24	ENSGT00390000015066.j #25	ENSGT00940000170775 #26	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.p
Cricetinae	ANCESTRAL SPECIES	52	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.b.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000246786 #19	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e.i ##24	ENSGT00390000015066.j #25	ENSGT00940000170775 #26	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.p
Golden Hamster	MODERN SPECIES	908									ENSMAUG00000014319 #15	Ptpn5 (ENSMAUG00000017057) #16	Tmem86a (ENSMAUG00000015010) #17	Spty2d1 (ENSMAUG00000015865) #18	ENSMAUG00000013699 #19	Misfa (ENSMAUG00000013290) #20	Uevld (ENSMAUG00000013172) #21	Tsg101 (ENSMAUG00000014719) #22	Ldhc (ENSMAUG00000011667) #23	ENSMAUG00000010401 #24	ENSMAUG00000009338 #25	ENSMAUG00000015950 #26	ENSMAUG00000010870 #27
Chinese hamster chok1gshd	MODERN SPECIES	226	ENSCGRG00001015132 ##15	ENSCGRG00001013322 ##15	ENSCGRG00001017168 ##15	ENSCGRG00001013950 ##15	ENSCGRG00001000128 ##15	Mrgprx1 (ENSCGRG00001013350) ##15	ENSCGRG00001003638	ENSCGRG00001004027 #15	ENSCGRG00001005262	Ptpn5 (ENSCGRG00001019501) #16	Tmem86a (ENSCGRG00001000634) #17	Spty2d1 (ENSCGRG00001015942) #18	ENSCGRG00001020032	Misfa (ENSCGRG00001020067) #20	Uevld (ENSCGRG00001020288) #21	Tsg101 (ENSCGRG00001022420) #22	Ldhc (ENSCGRG00001018177) #23	ENSCGRG00001003218 ##24	Gtf2h1 (ENSCGRG00001007611) #25	Hps5 (ENSCGRG00001010559) #27	ENSCGRG00001012513	ENSCGRG00001012524
Cricetidae_B	ANCESTRAL SPECIES	73								ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000246786 #19	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e ##24	ENSGT00390000015066.j #25	ENSGT00940000155818 #27
Prairie vole	MODERN SPECIES	9	Svip (ENSMOCG00000012616)	ENSMOCG00000001550	ENSMOCG00000000184	ENSMOCG00000017120 ##15	ENSMOCG00000012949	ENSMOCG00000000883 ##15	ENSMOCG00000009273	Mrgprx1 (ENSMOCG00000021193) ##15	ENSMOCG00000020275 #15	Ptpn5 (ENSMOCG00000002109) #16	Tmem86a (ENSMOCG00000018896) #17	Spty2d1 (ENSMOCG00000016496) #18	ENSMOCG00000010923 #19	Misfa (ENSMOCG00000010685) #20	ENSMOCG00000001154 #21	Tsg101 (ENSMOCG00000019743) #22	ENSMOCG00000016749	ENSMOCG00000015487 #23	ENSMOCG00000002442 #23	ENSMOCG00000020016 ##24	Gtf2h1 (ENSMOCG00000008606) #25	Hps5 (ENSMOCG00000010495) #27	ENSMOCG00000002900	Gabrb3 (ENSMOCG00000022638)	Gabra5 (ENSMOCG00000001448)	Gabrg3 (ENSMOCG00000013639)	Oca2 (ENSMOCG00000009585)	Herc2 (ENSMOCG00000003463)	Nipa1 (ENSMOCG00000008975)	Nipa2 (ENSMOCG00000015300)	Cyfip1 (ENSMOCG00000018559)
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000028866	ENSPEMG00000029784	ENSPEMG00000024562	ENSPEMG00000027816	ENSPEMG00000027080	ENSPEMG00000025968	Mrgprx1 (ENSPEMG00000007777) ##15	ENSPEMG00000022426	ENSPEMG00000021299 #15	Ptpn5 (ENSPEMG00000022553) #16	Tmem86a (ENSPEMG00000024287) #17	ENSPEMG00000023153 #18	ENSPEMG00000021660 #19	Misfa (ENSPEMG00000021845) #20	Uevld (ENSPEMG00000012328) #21	ENSPEMG00000022662 #22	ENSPEMG00000022031 #23	ENSPEMG00000011562 ##24	ENSPEMG00000013216 #25	ENSPEMG00000028549	ENSPEMG00000019594	ENSPEMG00000028728	Luzp2 (ENSPEMG00000019695)	Siglech (ENSPEMG00000016963)	Tubgcp5 (ENSPEMG00000017749)	Cyfip1 (ENSPEMG00000020064)	Nipa2 (ENSPEMG00000028381)	Nipa1 (ENSPEMG00000011557)	Herc2 (ENSPEMG00000019120)	Oca2 (ENSPEMG00000020098)	Gabrg3 (ENSPEMG00000019431)
Northern American deer mouse	MODERN SPECIES	475	ENSPEMG00000029647	ENSPEMG00000030086	Egfl6 (ENSPEMG00000012250)	Tceanc (ENSPEMG00000025764)	ENSPEMG00000013920	ENSPEMG00000030200	ENSPEMG00000013968	ENSPEMG00000014145	Rab9 (ENSPEMG00000027764)	Trappc2 (ENSPEMG00000016002)	Ofd1 (ENSPEMG00000017896)	Gpm6b (ENSPEMG00000000655)	ENSPEMG00000024383	ENSPEMG00000009181	Glra2 (ENSPEMG00000010716)	ENSPEMG00000012662 #22	Fancb (ENSPEMG00000014927)	Mospd2 (ENSPEMG00000016810)	Asb9 (ENSPEMG00000012020)	Asb11 (ENSPEMG00000004210)	Piga (ENSPEMG00000029436)	Vegfd (ENSPEMG00000012888)	Pir (ENSPEMG00000014083)	Bmx (ENSPEMG00000017739)	Ace2 (ENSPEMG00000016498)	Cltrn (ENSPEMG00000009108)	Car5b (ENSPEMG00000014305)	ENSPEMG00000026938	ENSPEMG00000018871	Ap1s2 (ENSPEMG00000007373)	Rnf138rt1 (ENSPEMG00000025202)
Murinae	ANCESTRAL SPECIES		ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00960000190993	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a.c.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a.c.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b
Mus	ANCESTRAL SPECIES		ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00960000190993	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a.c.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a.c.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a.d ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.a.d ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.p	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Mus_A	ANCESTRAL SPECIES	1	ENSGT00960000190993	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a.c.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a.c.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a.d ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.b.c ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.b.d ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.b.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.a.c ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e.f.b ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.p.c	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Mus_B	ANCESTRAL SPECIES		ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a.c.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a.d ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.b.c ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.b.d ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.b.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.a.d.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.a.c.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b.d.a.a.b #15	ENSGT01030000234639.A.b.a.b.a.b.a.b.c.a.b.a #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e.f.b ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.p.c	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Mouse	MODERN SPECIES	16	Mrgprb4 (ENSMUSG00000070550) ##15	Mrgprb5 (ENSMUSG00000070551) ##15	Mrgprx1 (ENSMUSG00000070552) ##15	Mrgpra4 (ENSMUSG00000067173) #15	Mrgpra3 (ENSMUSG00000078698) #15	Mrgpra2b (ENSMUSG00000096719) #15	Mrgpra2a (ENSMUSG00000093973) #15	Mrgpra1 (ENSMUSG00000050650) #15	Mrgpra9 (ENSMUSG00000074111) #15	Mrgpra6 (ENSMUSG00000052303) #15	Ptpn5 (ENSMUSG00000030854) #16	Tmem86a (ENSMUSG00000010307) #17	Spty2d1 (ENSMUSG00000049516) #18	Misfa (ENSMUSG00000056509) #20	Uevld (ENSMUSG00000043262) #21	Tsg101 (ENSMUSG00000014402) #22	Ldhc (ENSMUSG00000030851) #23	Ldha (ENSMUSG00000063229) ##24	Gtf2h1 (ENSMUSG00000006599) #25	Hps5 (ENSMUSG00000014418) #27	Saa2 (ENSMUSG00000057465)	Saa1 (ENSMUSG00000074115)	Saa4 (ENSMUSG00000040017)	Saa3 (ENSMUSG00000040026)	Saal1 (ENSMUSG00000006763)	Tph1 (ENSMUSG00000040046)	Sergef (ENSMUSG00000030839)	Kcnc1 (ENSMUSG00000058975)	Myod1 (ENSMUSG00000009471)	Otog (ENSMUSG00000009487)	Ush1c (ENSMUSG00000030838)
Mus_C	ANCESTRAL SPECIES	13	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.a.d ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.b.c ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.c.a.b.d ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.b.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.a.d.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.d.a.c.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b.c.b #15	ENSGT01030000234639.A.b.a.b.a.b.a.b.c.a.b.a #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000246954	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e.f.a.a.b ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.p.c	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
spretus	MODERN SPECIES	16	Mrgprb3 (MGP_SPRETEiJ_G0030886) ##15	Mrgprb2 (MGP_SPRETEiJ_G0030885) ##15	Mrgprx2 (MGP_SPRETEiJ_G0030884) ##15	Mrgprb1 (MGP_SPRETEiJ_G0030883) ##15	Mrgprb8 (MGP_SPRETEiJ_G0030882) ##15	Mrgprb5 (MGP_SPRETEiJ_G0030881) ##15	Mrgprx1 (MGP_SPRETEiJ_G0030880) ##15	MGP_SPRETEiJ_G0030879 #15	MGP_SPRETEiJ_G0030878 #15	Mrgpra6 (MGP_SPRETEiJ_G0030877) #15	Ptpn5 (MGP_SPRETEiJ_G0030876) #16	Tmem86a (MGP_SPRETEiJ_G0030875) #17	Spty2d1 (MGP_SPRETEiJ_G0030874) #18	MGP_SPRETEiJ_G0030873	Uevld (MGP_SPRETEiJ_G0030872) #21	MGP_SPRETEiJ_G0030871 #22	Ldhc (MGP_SPRETEiJ_G0030870) #23	Ldha (MGP_SPRETEiJ_G0030869) ##24	Gtf2h1 (MGP_SPRETEiJ_G0030868) #25	Hps5 (MGP_SPRETEiJ_G0030867) #27	MGP_SPRETEiJ_G0030866	MGP_SPRETEiJ_G0030865	Saa4 (MGP_SPRETEiJ_G0030864)	Saa3 (MGP_SPRETEiJ_G0030863)	Saal1 (MGP_SPRETEiJ_G0030862)	Tph1 (MGP_SPRETEiJ_G0030861)	Sergef (MGP_SPRETEiJ_G0030860)	Kcnc1 (MGP_SPRETEiJ_G0030859)	Myod1 (MGP_SPRETEiJ_G0030858)	Otog (MGP_SPRETEiJ_G0030857)	Ush1c (MGP_SPRETEiJ_G0030856)
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	2560					ENSMSIG00000005653 #15	ENSMSIG00000005637 #15	ENSMSIG00000005598 #15	ENSMSIG00000005594	ENSMSIG00000005585 #15	Ptpn5 (ENSMSIG00000005507) #16	Tmem86a (ENSMSIG00000005482) #17	Spty2d1 (ENSMSIG00000005441) #18	ENSMSIG00000005426	Misfa (ENSMSIG00000005413) #20	Uevld (ENSMSIG00000005367) #21	ENSMSIG00000005342 #22	Ldhc (ENSMSIG00000005281) #23	ENSMSIG00000005205 ##24	Gtf2h1 (ENSMSIG00000005013) #25	Hps5 (ENSMSIG00000004919) #27	ENSMSIG00000004906
Steppe mouse	MODERN SPECIES	3179														Myc (ENSMSIG00000013529)	ENSMSIG00000013621	ENSMSIG00000013666 #22
Ryukyu mouse	MODERN SPECIES	16	Dbx1 (MGP_CAROLIEiJ_G0029788)	Nav2 (MGP_CAROLIEiJ_G0029787)	E2f8 (MGP_CAROLIEiJ_G0029786)	Csrp3 (MGP_CAROLIEiJ_G0029785)	Zdhhc13 (MGP_CAROLIEiJ_G0029784)	Mrgprb3 (MGP_CAROLIEiJ_G0029783) ##15	Mrgprx2 (MGP_CAROLIEiJ_G0029782) ##15	Mrgprb1 (MGP_CAROLIEiJ_G0029781) ##15	Mrgprb8 (MGP_CAROLIEiJ_G0029780) ##15	Mrgprx1 (MGP_CAROLIEiJ_G0029779) ##15	Ptpn5 (MGP_CAROLIEiJ_G0029778) #16	Tmem86a (MGP_CAROLIEiJ_G0029777) #17	Spty2d1 (MGP_CAROLIEiJ_G0029776) #18	MGP_CAROLIEiJ_G0029775	Uevld (MGP_CAROLIEiJ_G0029774) #21	Tsg101 (MGP_CAROLIEiJ_G0029773) #22	MGP_CAROLIEiJ_G0029772 #23	Ldha (MGP_CAROLIEiJ_G0029771) ##24	Gtf2h1 (MGP_CAROLIEiJ_G0029770) #25	Hps5 (MGP_CAROLIEiJ_G0029769) #27	MGP_CAROLIEiJ_G0029768	MGP_CAROLIEiJ_G0029767	Saa4 (MGP_CAROLIEiJ_G0029766)	Saa3 (MGP_CAROLIEiJ_G0029765)	Saal1 (MGP_CAROLIEiJ_G0029764)	Tph1 (MGP_CAROLIEiJ_G0029763)	Sergef (MGP_CAROLIEiJ_G0029762)	Kcnc1 (MGP_CAROLIEiJ_G0029761)	Myod1 (MGP_CAROLIEiJ_G0029760)	Otog (MGP_CAROLIEiJ_G0029759)	Ush1c (MGP_CAROLIEiJ_G0029758)
Shrew mouse	MODERN SPECIES		Dbx1 (MGP_PahariEiJ_G0013013)	Nav2 (MGP_PahariEiJ_G0013012)	E2f8 (MGP_PahariEiJ_G0013011)	Csrp3 (MGP_PahariEiJ_G0013010)	Zdhhc13 (MGP_PahariEiJ_G0013009)	Mrgprb3 (MGP_PahariEiJ_G0013008) ##15	Mrgprb2 (MGP_PahariEiJ_G0013007) ##15	MGP_PahariEiJ_G0013006	MGP_PahariEiJ_G0013005 ##15	MGP_PahariEiJ_G0013004 ##15	Ptpn5 (MGP_PahariEiJ_G0013003) #16	Tmem86a (MGP_PahariEiJ_G0013002) #17	Spty2d1 (MGP_PahariEiJ_G0013001) #18	MGP_PahariEiJ_G0013000	Uevld (MGP_PahariEiJ_G0012999) #21	Tsg101 (MGP_PahariEiJ_G0012998) #22	Ldhc (MGP_PahariEiJ_G0012997) #23	MGP_PahariEiJ_G0012996 ##24	Gtf2h1 (MGP_PahariEiJ_G0012995) #25	Hps5 (MGP_PahariEiJ_G0012994) #27	MGP_PahariEiJ_G0012993	MGP_PahariEiJ_G0012992	Saa4 (MGP_PahariEiJ_G0012991)	Saa3 (MGP_PahariEiJ_G0012990)	Saal1 (MGP_PahariEiJ_G0012989)	Tph1 (MGP_PahariEiJ_G0012988)	MGP_PahariEiJ_G0012987	Kcnc1 (MGP_PahariEiJ_G0012986)	Myod1 (MGP_PahariEiJ_G0012985)	Otog (MGP_PahariEiJ_G0012984)	Ush1c (MGP_PahariEiJ_G0012983)
Rat	MODERN SPECIES		ENSRNOG00000068609	LOC120093062 (ENSRNOG00000064044) ##15	Mrgprb13-ps2 (ENSRNOG00000070585) ##15	Mrgprb13 (ENSRNOG00000064327) ##15	Mrgprb5 (ENSRNOG00000022703) ##15	ENSRNOG00000064833	Mrgprb4 (ENSRNOG00000033021) ##15	Mrgprx1 (ENSRNOG00000014242) ##15	Mrgprx3 (ENSRNOG00000014227) #15	Ptpn5 (ENSRNOG00000013981) #16	Tmem86a (ENSRNOG00000013663) #17	AABR07003273.1 (ENSRNOG00000050257)	Spty2d1 (ENSRNOG00000070392) #18	LOC100911574 (ENSRNOG00000066101) #20	Uevld (ENSRNOG00000013624) #21	Tsg101 (ENSRNOG00000013381) #22	Ldhc (ENSRNOG00000013103) #23	Ldha (ENSRNOG00000013009) ##24	Gtf2h1 (ENSRNOG00000012360) #25	Saa4 (ENSRNOG00000055531) #27	Saal1 (ENSRNOG00000011895)	Tph1 (ENSRNOG00000011672)	Sergef (ENSRNOG00000011488)	Kcnc1 (ENSRNOG00000055401)	Myod1 (ENSRNOG00000011306)	Otog (ENSRNOG00000010983)	Ush1c (ENSRNOG00000021149)	Abcc8 (ENSRNOG00000021130)	Kcnj11 (ENSRNOG00000021128)	Ncr3lg1 (ENSRNOG00000070704)	Nomo1 (ENSRNOG00000021118)
Upper Galilee mountains blind mole rat	MODERN SPECIES	765									Mrgprx1 (ENSNGAG00000002808) ##15	Ptpn5 (ENSNGAG00000012788) #16	Tmem86a (ENSNGAG00000016657) #17	ENSNGAG00000007901	ENSNGAG00000018377	Misfa (ENSNGAG00000016983) #20	Uevld (ENSNGAG00000022777) #21	Tsg101 (ENSNGAG00000014332) #22	Ldhc (ENSNGAG00000024361) #23	ENSNGAG00000013575 ##24	Gtf2h1 (ENSNGAG00000002626) #25	Hps5 (ENSNGAG00000005510) #27	ENSNGAG00000015160	ENSNGAG00000012157
Lesser Egyptian jerboa	MODERN SPECIES	43	Dbx1 (ENSJJAG00000015647)	Nav2 (ENSJJAG00000016851)	ENSJJAG00000013317	E2f8 (ENSJJAG00000022430)	Csrp3 (ENSJJAG00000017164)	Zdhhc13 (ENSJJAG00000020502)	ENSJJAG00000016490 #15	ENSJJAG00000016364	ENSJJAG00000023767	Ptpn5 (ENSJJAG00000016907) #16	Tmem86a (ENSJJAG00000020148) #17	Spty2d1 (ENSJJAG00000005658) #18	ENSJJAG00000012407	Misfa (ENSJJAG00000015453) #20	ENSJJAG00000017053	Tsg101 (ENSJJAG00000016833) #22	Ldhc (ENSJJAG00000010418) #23	ENSJJAG00000000482 ##24	ENSJJAG00000012155 #25	ENSJJAG00000013414 #27	ENSJJAG00000012248	Saa3 (ENSJJAG00000017766)
Kangaroo rat	MODERN SPECIES	365	Htatip2 (ENSDORG00000005011)	Dbx1 (ENSDORG00000009286)	Nav2 (ENSDORG00000004179)	E2f8 (ENSDORG00000000040)	Csrp3 (ENSDORG00000000039)	Zdhhc13 (ENSDORG00000000038)	Mrgprx1 (ENSDORG00000023393) ##15	ENSDORG00000025419 #15	ENSDORG00000027554 #15	Ptpn5 (ENSDORG00000005711) #16	Tmem86a (ENSDORG00000026848) #17	Spty2d1 (ENSDORG00000024232) #18	ENSDORG00000030236	Misfa (ENSDORG00000027621) #20	Uevld (ENSDORG00000005099) #21	Tsg101 (ENSDORG00000013773) #22	Ldhc (ENSDORG00000003526) #23	ENSDORG00000003524 ##24	ENSDORG00000004145 #25	ENSDORG00000027902 #27
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.a.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.f.a.a.a ##24	ENSGT00390000015066 #25	ENSGT00940000170775 #26	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.a ##15	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a.b.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a.b.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.f.a.a.a.a ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005013618	ENSSVLG00005013656 ##15	ENSSVLG00005013725	ENSSVLG00005013794 ##15	ENSSVLG00005013852 ##15	ENSSVLG00005013891 ##15	ENSSVLG00005013942 ##15	ENSSVLG00005014019	ENSSVLG00005014064 #15	PTPN5 (ENSSVLG00005014173) #16	IGSF22 (ENSSVLG00005014642)	TMEM86A (ENSSVLG00005014883) #17	SPTY2D1 (ENSSVLG00005014914) #18	ENSSVLG00005014961	UEVLD (ENSSVLG00005015052) #21	TSG101 (ENSSVLG00005015216) #22	LDHC (ENSSVLG00005015342) #23	ENSSVLG00005015754 ##24	GTF2H1 (ENSSVLG00005016086) #25	HPS5 (ENSSVLG00005004813) #27	ENSSVLG00005004846	ENSSVLG00005004866	ENSSVLG00005004896	SAA4 (ENSSVLG00005004914)	ENSSVLG00005004937	SAAL1 (ENSSVLG00005004983)	TPH1 (ENSSVLG00005005094)	SERGEF (ENSSVLG00005005160)	KCNC1 (ENSSVLG00005005188)	MYOD1 (ENSSVLG00005005222)	OTOG (ENSSVLG00005005330)
Marmotini	ANCESTRAL SPECIES	22	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.t.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.b.t.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.b.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a.b.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a.b.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01040000242859	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.f.a.a.a.a ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b
Alpin marmot	MODERN SPECIES	3	ENSMMMG00000005582 ##15	ENSMMMG00000005573 ##15	ENSMMMG00000005563 ##15	ENSMMMG00000005501 ##15	ENSMMMG00000005493 ##15	ENSMMMG00000005471 ##15	ENSMMMG00000005461	ENSMMMG00000005438 ##15	ENSMMMG00000005434 #15	PTPN5 (ENSMMMG00000005398) #16	TMEM86A (ENSMMMG00000005376) #17	SPTY2D1 (ENSMMMG00000005363) #18	ENSMMMG00000005356	ENSMMMG00000005344 #20	UEVLD (ENSMMMG00000005312) #21	TSG101 (ENSMMMG00000005296) #22	ENSMMMG00000005255 #23	ENSMMMG00000005208 ##24	GTF2H1 (ENSMMMG00000005016) #25	HPS5 (ENSMMMG00000004900) #27	SAA4 (ENSMMMG00000004885)	ENSMMMG00000004876	SAAL1 (ENSMMMG00000004860)	ENSMMMG00000004842	TPH1 (ENSMMMG00000004814)	SERGEF (ENSMMMG00000004759)	ENSMMMG00000004750	KCNC1 (ENSMMMG00000004744)	MYOD1 (ENSMMMG00000004739)	ENSMMMG00000004715	USH1C (ENSMMMG00000004314)
Marmotini_b	ANCESTRAL SPECIES	61					ENSGT01030000234639.A.b.a.b.a.b.a.a.b.a.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a.b.b ##15	ENSGT01030000234639.A.b.a.b.a.b.a.a.a.b.a ##15	ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01040000242859	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.f.a.a.a.a ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00900000143156.a	ENSGT01090000260040.a.a.a.r	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Arctic ground squirrel	MODERN SPECIES	621						ENSUPAG00010010725 ##15	ENSUPAG00010010717 ##15	ENSUPAG00010010710	ENSUPAG00010010705 #15	PTPN5 (ENSUPAG00010010679) #16	IGSF22 (ENSUPAG00010010659)	TMEM86A (ENSUPAG00010010657) #17	ENSUPAG00010010643	ENSUPAG00010010639 #20	UEVLD (ENSUPAG00010010594) #21	TSG101 (ENSUPAG00010010565) #22	LDHC (ENSUPAG00010010550) #23	ENSUPAG00010010535 ##24	GTF2H1 (ENSUPAG00010010513) #25	HPS5 (ENSUPAG00010010479) #27
Squirrel	DUPLICATION
Squirrel	MODERN SPECIES	128				ENSSTOG00000026033 ##15	ENSSTOG00000030069 ##15	ENSSTOG00000032510 ##15	ENSSTOG00000032916 ##15	ENSSTOG00000032362	ENSSTOG00000025927 #15	PTPN5 (ENSSTOG00000000962) #16	TMEM86A (ENSSTOG00000001110) #17	SPTY2D1 (ENSSTOG00000009291) #18	ENSSTOG00000032201	ENSSTOG00000032227 #20	UEVLD (ENSSTOG00000009271) #21	TSG101 (ENSSTOG00000024403) #22	LDHC (ENSSTOG00000032003) #23	ENSSTOG00000000014 ##24	ENSSTOG00000033703	GTF2H1 (ENSSTOG00000000013) #25	HPS5 (ENSSTOG00000000011) #27	ENSSTOG00000000012	ENSSTOG00000022064	SAAL1 (ENSSTOG00000003419)	ENSSTOG00000031021	TPH1 (ENSSTOG00000003404)	SERGEF (ENSSTOG00000003395)	KCNC1 (ENSSTOG00000019519)	MYOD1 (ENSSTOG00000011556)	OTOG (ENSSTOG00000025595)	USH1C (ENSSTOG00000001933)
Squirrel	MODERN SPECIES	190															NPBWR1 (ENSSTOG00000031799)	ENSSTOG00000033788 #22	RB1CC1 (ENSSTOG00000003037)	ALKAL1 (ENSSTOG00000003032)	ST18 (ENSSTOG00000016500)	ENSSTOG00000027757	PCMTD1 (ENSSTOG00000005412)	SNTG1 (ENSSTOG00000006780)	SNAI2 (ENSSTOG00000028743)	CLXN (ENSSTOG00000005832)	ENSSTOG00000033326	UBE2V2 (ENSSTOG00000021769)	MCM4 (ENSSTOG00000009905)	PRKDC (ENSSTOG00000009784)	SPIDR (ENSSTOG00000010890)
Hystricomorpha	ANCESTRAL SPECIES	5								ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000248165	ENSGT00940000164956	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.f.a.a.b.b.a ##24	ENSGT00390000015066 #25	ENSGT00940000170775 #26	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000041424 ##15	ENSHGLG00000046737 ##15	ENSHGLG00000035050 #15	ENSHGLG00000004153	ENSHGLG00000039941 #15	ENSHGLG00000038400	ENSHGLG00000009118 #16	ENSHGLG00000008779	TMEM86A (ENSHGLG00000048247) #17	ENSHGLG00000046693	ENSHGLG00000008282	ENSHGLG00000035318	ENSHGLG00000048762	ENSHGLG00000046195 #20	UEVLD (ENSHGLG00000008452) #21	TSG101 (ENSHGLG00000013227) #22	LDHC (ENSHGLG00000015435) #23	ENSHGLG00000015168 ##24	ENSHGLG00000015129 #25	HPS5 (ENSHGLG00000010391) #27	SAA4 (ENSHGLG00000042878)	ENSHGLG00000039519	SAAL1 (ENSHGLG00000007181)	TPH1 (ENSHGLG00000033079)	SERGEF (ENSHGLG00000005775)	KCNC1 (ENSHGLG00000005420)	MYOD1 (ENSHGLG00000004984)	ENSHGLG00000006891	USH1C (ENSHGLG00000010904)	ABCC8 (ENSHGLG00000008993)	KCNJ11 (ENSHGLG00000037268)
Hystricomorpha_a	ANCESTRAL SPECIES	47									ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000248165	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.f.a.a.b.b.a.a ##24	ENSGT00390000015066 #25	ENSGT00940000170775 #26	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Guinea pig	MODERN SPECIES	215							ENSCPOG00000037848 ##15	ENSCPOG00000003861 #15	PTPN5 (ENSCPOG00000011812) #16	TMEM86A (ENSCPOG00000035510) #17	SPTY2D1 (ENSCPOG00000012002) #18	ENSCPOG00000034821	ENSCPOG00000035484 #20	UEVLD (ENSCPOG00000011997) #21	ENSCPOG00000027522	TSG101 (ENSCPOG00000011994) #22	LDHC (ENSCPOG00000011926) #23	LDHA (ENSCPOG00000031440) ##24	GTF2H1 (ENSCPOG00000004348) #25	HPS5 (ENSCPOG00000004341) #27
Hystricomorpha_b	ANCESTRAL SPECIES	5									ENSGT01030000234639.A.b.a.b.a.b.a.b #15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01090000262692	ENSGT00970000193605 #20	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l.e ##24	ENSGT00390000015066 #25	ENSGT00940000170775 #26	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Long-tailed chinchilla	MODERN SPECIES	121								ENSCLAG00000017259 #15	ENSCLAG00000017279	PTPN5 (ENSCLAG00000016396) #16	TMEM86A (ENSCLAG00000017173) #17	SPTY2D1 (ENSCLAG00000017224) #18	ENSCLAG00000017004	ENSCLAG00000017270 #20	UEVLD (ENSCLAG00000017090) #21	TSG101 (ENSCLAG00000017169) #22	LDHC (ENSCLAG00000017086) #23	ENSCLAG00000017061 ##24	GTF2H1 (ENSCLAG00000016966) #25	HPS5 (ENSCLAG00000017249) #27	SAA4 (ENSCLAG00000016977)	ENSCLAG00000016741	SAAL1 (ENSCLAG00000017121)	TPH1 (ENSCLAG00000017233)	SERGEF (ENSCLAG00000016819)	KCNC1 (ENSCLAG00000017208)	MYOD1 (ENSCLAG00000016988)	OTOG (ENSCLAG00000017199)	USH1C (ENSCLAG00000017070)	ABCC8 (ENSCLAG00000017273)	KCNJ11 (ENSCLAG00000018089)
Degu	DUPLICATION
Degu	MODERN SPECIES	108						ENSODEG00000010363	ENSODEG00000011399 #15	PTPN5 (ENSODEG00000011115) #16	TMEM86A (ENSODEG00000012064) #17	ENSODEG00000019868	ENSODEG00000010606	ENSODEG00000009912 #20	SPTY2D1 (ENSODEG00000011157) #18	ENSODEG00000010073	ENSODEG00000009385	TSG101 (ENSODEG00000011046) #22	ENSODEG00000010760 #23	ENSODEG00000010324 ##24	ENSODEG00000009666 #25	ENSODEG00000019665 #26	ENSODEG00000010218 #27	ENSODEG00000009884 #27	ENSODEG00000009628	ENSODEG00000009541 ##24	ENSODEG00000009128	SAAL1 (ENSODEG00000013515)	TPH1 (ENSODEG00000009357)	KCNC1 (ENSODEG00000009078)	MYOD1 (ENSODEG00000009827)	OTOG (ENSODEG00000012735)	USH1C (ENSODEG00000009175)
Degu	MODERN SPECIES	224	ENSODEG00000004868	ENSODEG00000004915	ENSODEG00000004024	ADH7 (ENSODEG00000004048)	ENSODEG00000004193	TRMT10A (ENSODEG00000004213)	MTTP (ENSODEG00000004277)	C4orf54 (ENSODEG00000004434)	DAPP1 (ENSODEG00000004478)	ENSODEG00000004603	DNAJB14 (ENSODEG00000002881)	ENSODEG00000003190	ENSODEG00000003228	PPP3CA (ENSODEG00000003402)	BANK1 (ENSODEG00000003823)	ENSODEG00000003969 #22	SLC39A8 (ENSODEG00000004017)	NFKB1 (ENSODEG00000004140)	MANBA (ENSODEG00000004246)	ENSODEG00000004308	ENSODEG00000019071	CISD2 (ENSODEG00000004362)	SLC9B1 (ENSODEG00000004412)	ENSODEG00000004446	SLC9B2 (ENSODEG00000002935)	BDH2 (ENSODEG00000002968)	CENPE (ENSODEG00000003022)	ENSODEG00000003075	ENSODEG00000003090	ENSODEG00000003102	ENSODEG00000003124
Lagomorpha	ANCESTRAL SPECIES	4	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.l #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.a	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Rabbit	MODERN SPECIES	466												TMEM86A (ENSOCUG00000003954) #17	SPTY2D1 (ENSOCUG00000025674) #18	MISFA (ENSOCUG00000038035)	UEVLD (ENSOCUG00000013952) #21	TSG101 (ENSOCUG00000013940) #22	LDHC (ENSOCUG00000027929) #23	ENSOCUG00000015939 #24	ENSOCUG00000017633 #25	HPS5 (ENSOCUG00000017624) #27	ENSOCUG00000021891	ENSOCUG00000017620	SAA4 (ENSOCUG00000024412)	ENSOCUG00000002424	SAAL1 (ENSOCUG00000002418)	SERGEF (ENSOCUG00000002409)	KCNC1 (ENSOCUG00000025304)	MYOD1 (ENSOCUG00000021405)	OTOG (ENSOCUG00000006205)	USH1C (ENSOCUG00000002028)	ENSOCUG00000039600
Pika	MODERN SPECIES	3556														SPTY2D1 (ENSOPRG00000014500) #18	UEVLD (ENSOPRG00000014486) #21	TSG101 (ENSOPRG00000014461) #22
Tree shrew	MODERN SPECIES	360															ENSTBEG00000012098 #21	ENSTBEG00000011836 #22	LDHC (ENSTBEG00000011741) #23	ENSTBEG00000011714 #24	GTF2H1 (ENSTBEG00000011488) #25
Primates	ANCESTRAL SPECIES		ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.a.a ##24	ENSGT00940000153201.j.k.a.b ##24	ENSGT01030000235549	ENSGT00940000153201.j.k.a.a.b ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.b ##24	ENSGT01030000235549	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490
Bushbaby	MODERN SPECIES	116	HTATIP2 (ENSOGAG00000008274)	DBX1 (ENSOGAG00000014591)	ENSOGAG00000014577	E2F8 (ENSOGAG00000005774)	CSRP3 (ENSOGAG00000005772)	ZDHHC13 (ENSOGAG00000005767)	ENSOGAG00000005766 ##15	ENSOGAG00000033775 ##15	ENSOGAG00000031800 ##15	ENSOGAG00000032813 ##15	PTPN5 (ENSOGAG00000016683) #16	IGSF22 (ENSOGAG00000008964)	TMEM86A (ENSOGAG00000004415) #17	SPTY2D1 (ENSOGAG00000031814) #18	ENSOGAG00000009268 #23	TSG101 (ENSOGAG00000009264) #22	LDHAL6A (ENSOGAG00000009261)	LDHC (ENSOGAG00000003725) #23	GTF2H1 (ENSOGAG00000000710) #25	HPS5 (ENSOGAG00000011208) #27	ENSOGAG00000011206	ENSOGAG00000027885 #27	ENSOGAG00000029424	SAAL1 (ENSOGAG00000011202)	TPH1 (ENSOGAG00000011200)	SERGEF (ENSOGAG00000011195)	KCNC1 (ENSOGAG00000011185)	MYOD1 (ENSOGAG00000029784)	OTOG (ENSOGAG00000033908)	USH1C (ENSOGAG00000006113)	ABCC8 (ENSOGAG00000006103)
Lemuriformes	ANCESTRAL SPECIES	16	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.b ##24	ENSGT01030000235549	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	27	NELL1 (ENSMICG00000017138)	SLC6A5 (ENSMICG00000017129)	PRMT3 (ENSMICG00000042200)	HTATIP2 (ENSMICG00000017114)	ENSMICG00000037823	DBX1 (ENSMICG00000017111)	NAV2 (ENSMICG00000017096)	E2F8 (ENSMICG00000017089)	CSRP3 (ENSMICG00000044417)	ZDHHC13 (ENSMICG00000017083)	PTPN5 (ENSMICG00000017605) #16	TMEM86A (ENSMICG00000046987) #17	SPTY2D1 (ENSMICG00000017602) #18	ENSMICG00000027423	ENSMICG00000003117	TSG101 (ENSMICG00000008879) #22	LDHAL6A (ENSMICG00000008876)	LDHC (ENSMICG00000009475) #23	LDHA (ENSMICG00000029727) ##24	ENSMICG00000036424	GTF2H1 (ENSMICG00000009467) #25	HPS5 (ENSMICG00000005626) #27	SAA4 (ENSMICG00000036934)	ENSMICG00000005619	ENSMICG00000042946	ENSMICG00000042509	SAAL1 (ENSMICG00000005592)	TPH1 (ENSMICG00000005586)	SERGEF (ENSMICG00000005579)	KCNC1 (ENSMICG00000005569)	MYOD1 (ENSMICG00000005566)
Mouse lemur	MODERN SPECIES	20	FAM241A (ENSMICG00000048071)	PITX2 (ENSMICG00000002070)	ENPEP (ENSMICG00000042642)	ENSMICG00000045345	ELOVL6 (ENSMICG00000045952)	LRIT3 (ENSMICG00000036410)	RRH (ENSMICG00000038685)	GAR1 (ENSMICG00000003326)	CFI (ENSMICG00000003323)	PLA2G12A (ENSMICG00000010304)	CASP6 (ENSMICG00000010297)	ENSMICG00000037926	SEC24B (ENSMICG00000010277)	ENSMICG00000036525	COL25A1 (ENSMICG00000002737)	ENSMICG00000037629 #22	ENSMICG00000002187	OSTC (ENSMICG00000002182)	ENSMICG00000041882	LEF1 (ENSMICG00000012833)	HADH (ENSMICG00000012822)	CYP2U1 (ENSMICG00000012817)	SGMS2 (ENSMICG00000008740)	PAPSS1 (ENSMICG00000016262)	ENSMICG00000017692	DKK2 (ENSMICG00000027157)	GIMD1 (ENSMICG00000045116)	AIMP1 (ENSMICG00000010202)	TBCK (ENSMICG00000010786)	NPNT (ENSMICG00000010776)	GSTCD (ENSMICG00000030887)
Lemuriformes_a	ANCESTRAL SPECIES	24	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.k.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.k.a ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.b ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Greater bamboo lemur	MODERN SPECIES	809										TCAIM (ENSPSMG00000022586)	TOPAZ1 (ENSPSMG00000022561)	ZNF445 (ENSPSMG00000022546)	SPTY2D1 (ENSPSMG00000022528) #18	ENSPSMG00000022520	UEVLD (ENSPSMG00000022445) #21	TSG101 (ENSPSMG00000022312) #22	ENSPSMG00000022283	LDHC (ENSPSMG00000022259) #23	LDHA (ENSPSMG00000022183) ##24	GTF2H1 (ENSPSMG00000022156) #25	ENSPSMG00000022128	HPS5 (ENSPSMG00000022113) #27
Coquerels sifaka	MODERN SPECIES	591	ENSPCOG00000026464	HTATIP2 (ENSPCOG00000013907)	DBX1 (ENSPCOG00000019760)	NAV2 (ENSPCOG00000017617)	E2F8 (ENSPCOG00000018715)	CSRP3 (ENSPCOG00000027335)	ZDHHC13 (ENSPCOG00000005078)	ENSPCOG00000002623 ##15	ENSPCOG00000017911 ##15	PTPN5 (ENSPCOG00000018291) #16	IGSF22 (ENSPCOG00000021301)	TMEM86A (ENSPCOG00000015643) #17	SPTY2D1 (ENSPCOG00000020606) #18	ENSPCOG00000015051	UEVLD (ENSPCOG00000016777) #21	TSG101 (ENSPCOG00000022058) #22	ENSPCOG00000022047 #23	ENSPCOG00000025606	GTF2H1 (ENSPCOG00000016794) #25	HPS5 (ENSPCOG00000018482) #27	SAA4 (ENSPCOG00000014650)	ENSPCOG00000008984	ENSPCOG00000023938	SAAL1 (ENSPCOG00000013362)	TPH1 (ENSPCOG00000022787)	SERGEF (ENSPCOG00000015228)	KCNC1 (ENSPCOG00000028118)	MYOD1 (ENSPCOG00000028149)	OTOG (ENSPCOG00000023596)	USH1C (ENSPCOG00000024567)	ABCC8 (ENSPCOG00000018480)
Haplorrhini	ANCESTRAL SPECIES		ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Tarsier	MODERN SPECIES	4895													SPTY2D1 (ENSTSYG00000011672)	ENSTSYG00000031331	UEVLD (ENSTSYG00000009319) #21	TSG101 (ENSTSYG00000009228) #22	LDHAL6A (ENSTSYG00000009217)	ENSTSYG00000005772	ENSTSYG00000027606 #23
Simiiformes	ANCESTRAL SPECIES		ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.c ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000154770.q.b	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.a.a.f.a ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00940000155622.g	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Mas night monkey	MODERN SPECIES	830	DBX1 (ENSANAG00000026125)	ENSANAG00000024944	NAV2 (ENSANAG00000034282)	E2F8 (ENSANAG00000021738)	CSRP3 (ENSANAG00000020288)	ZDHHC13 (ENSANAG00000021790)	ENSANAG00000021063 ##15	ENSANAG00000016865 ##15	PTPN5 (ENSANAG00000021912) #16	IGSF22 (ENSANAG00000025272)	TMEM86A (ENSANAG00000019649) #17	SPTY2D1 (ENSANAG00000008192) #18	ENSANAG00000024616	UEVLD (ENSANAG00000027080) #21	ENSANAG00000022035	TSG101 (ENSANAG00000019676) #22	LDHAL6A (ENSANAG00000023203)	LDHC (ENSANAG00000037671) #23	ENSANAG00000037705 ##24	GTF2H1 (ENSANAG00000023697) #25	HPS5 (ENSANAG00000018225) #27	ENSANAG00000021057	SAA4 (ENSANAG00000020818)	ENSANAG00000021597	SAAL1 (ENSANAG00000036857)	TPH1 (ENSANAG00000018818)	SERGEF (ENSANAG00000036496)	KCNC1 (ENSANAG00000034875)	MYOD1 (ENSANAG00000032905)	OTOG (ENSANAG00000035931)	USH1C (ENSANAG00000033372)
Cebidae	ANCESTRAL SPECIES		ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.c ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000154770.q.b	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.a.a.f.a ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00940000155622.g	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Marmoset	MODERN SPECIES	2	DBX1 (ENSCJAG00000006734)	ENSCJAG00000087227	NAV2 (ENSCJAG00000006739)	E2F8 (ENSCJAG00000006811)	CSRP3 (ENSCJAG00000006844)	ZDHHC13 (ENSCJAG00000006851)	MRGPRX2 (ENSCJAG00000006924) ##15	ENSCJAG00000022906 ##15	PTPN5 (ENSCJAG00000009164) #16	IGSF22 (ENSCJAG00000006935)	TMEM86A (ENSCJAG00000076554) #17	SPTY2D1 (ENSCJAG00000006985) #18	ENSCJAG00000080960	ENSCJAG00000075110 #20	UEVLD (ENSCJAG00000007006) #21	TSG101 (ENSCJAG00000086769) #22	LDHAL6A (ENSCJAG00000007067)	ENSCJAG00000080933	LDHC (ENSCJAG00000007081) #23	GTF2H1 (ENSCJAG00000007129) #25	ENSCJAG00000074922	HPS5 (ENSCJAG00000007185) #27	ENSCJAG00000007204	ENSCJAG00000081433	SAA4 (ENSCJAG00000007213)	ENSCJAG00000043934	ENSCJAG00000007283	KCNC1 (ENSCJAG00000007290)	MYOD1 (ENSCJAG00000009258)	OTOG (ENSCJAG00000009263)	USH1C (ENSCJAG00000009310)
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.j.c ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A.i #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000154770.q.b	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.a.a.f.a.a ##24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00940000155622.g	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Capuchin	MODERN SPECIES	39	DBX1 (ENSCCAG00000030638)	ENSCCAG00000030549	ENSCCAG00000030635	NAV2 (ENSCCAG00000023073)	E2F8 (ENSCCAG00000032678)	CSRP3 (ENSCCAG00000037898)	ZDHHC13 (ENSCCAG00000031657)	PTPN5 (ENSCCAG00000031767) #16	IGSF22 (ENSCCAG00000015473)	TMEM86A (ENSCCAG00000022653) #17	ENSCCAG00000030365	ENSCCAG00000036425 #18	ENSCCAG00000037680	UEVLD (ENSCCAG00000036814) #21	ENSCCAG00000033011	TSG101 (ENSCCAG00000036169) #22	ENSCCAG00000020722	LDHAL6A (ENSCCAG00000031041)	LDHC (ENSCCAG00000031200) #23	ENSCCAG00000029060 ##24	ENSCCAG00000028937	GTF2H1 (ENSCCAG00000028407) #25	HPS5 (ENSCCAG00000032081) #27	ENSCCAG00000024577	ENSCCAG00000024041	SAA4 (ENSCCAG00000025050)	ENSCCAG00000022385	SAAL1 (ENSCCAG00000025101)	TPH1 (ENSCCAG00000023915)	SERGEF (ENSCCAG00000037352)	KCNC1 (ENSCCAG00000033090)
Bolivian squirrel monkey	MODERN SPECIES	42	DBX1 (ENSSBOG00000028890)	ENSSBOG00000034512	NAV2 (ENSSBOG00000031555)	E2F8 (ENSSBOG00000014864)	CSRP3 (ENSSBOG00000026732)	ZDHHC13 (ENSSBOG00000023472)	ENSSBOG00000023462 ##15	PTPN5 (ENSSBOG00000022094) #16	IGSF22 (ENSSBOG00000035057)	TMEM86A (ENSSBOG00000022647) #17	SPTY2D1 (ENSSBOG00000019822) #18	ENSSBOG00000018184	UEVLD (ENSSBOG00000020574) #21	ENSSBOG00000023915	ENSSBOG00000016234	TSG101 (ENSSBOG00000032898) #22	LDHAL6A (ENSSBOG00000032789)	LDHC (ENSSBOG00000029573) #23	ENSSBOG00000023979 ##24	GTF2H1 (ENSSBOG00000035194) #25	HPS5 (ENSSBOG00000034848) #27	ENSSBOG00000025130	SAA4 (ENSSBOG00000035220)	SAAL1 (ENSSBOG00000000873)	TPH1 (ENSSBOG00000021704)	SERGEF (ENSSBOG00000021636)	KCNC1 (ENSSBOG00000032934)	MYOD1 (ENSSBOG00000032168)	OTOG (ENSSBOG00000031057)	USH1C (ENSSBOG00000030041)	ABCC8 (ENSSBOG00000021007)
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00940000155622.f	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00960000187178	ENSGT00390000004965.eb	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00910000144115.a.lb	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.c.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00940000155622.f	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912
Gibbon	MODERN SPECIES	5	NAV2 (ENSNLEG00000017807)	ENSNLEG00000028986	ENSNLEG00000033072	E2F8 (ENSNLEG00000017803)	CSRP3 (ENSNLEG00000017801)	ZDHHC13 (ENSNLEG00000017797)	ENSNLEG00000031608 ##15	ENSNLEG00000032837 ##15	PTPN5 (ENSNLEG00000017791) #16	IGSF22 (ENSNLEG00000017788)	TMEM86A (ENSNLEG00000017787) #17	ENSNLEG00000030606	SPTY2D1 (ENSNLEG00000017786) #18	ENSNLEG00000030850	UEVLD (ENSNLEG00000017785) #21	TSG101 (ENSNLEG00000017783) #22	LDHAL6A (ENSNLEG00000017780)	LDHC (ENSNLEG00000028060) #23	LDHA (ENSNLEG00000030432) ##24	GTF2H1 (ENSNLEG00000017760) #25	HPS5 (ENSNLEG00000017752) #27	ENSNLEG00000017749	ENSNLEG00000028928	ENSNLEG00000017750	SAAL1 (ENSNLEG00000017747)	TPH1 (ENSNLEG00000017744)	SERGEF (ENSNLEG00000017742)	KCNC1 (ENSNLEG00000017741)	OTOG (ENSNLEG00000017737)	USH1C (ENSNLEG00000017735)	ENSNLEG00000034870
Hominidae	ANCESTRAL SPECIES	1	ENSGT00960000187178	ENSGT00390000004965.eb	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00910000144115.a.lb	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.c.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00940000155622.f	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912
Orangutan	MODERN SPECIES	2	DBX1 (ENSPPYG00000003422)	NAV2 (ENSPPYG00000003423)	ENSPPYG00000033030	ENSPPYG00000031150	E2F8 (ENSPPYG00000003424)	CSRP3 (ENSPPYG00000003425)	ZDHHC13 (ENSPPYG00000003426)	MRGPRX1 (ENSPPYG00000034469) ##15	PTPN5 (ENSPPYG00000003430) #16	IGSF22 (ENSPPYG00000039072)	TMEM86A (ENSPPYG00000003431) #17	SPTY2D1 (ENSPPYG00000003432) #18	MISFA (ENSPPYG00000040732)	ENSPPYG00000002907	UEVLD (ENSPPYG00000003433) #21	TSG101 (ENSPPYG00000003434) #22	LDHAL6A (ENSPPYG00000003435)	LDHC (ENSPPYG00000003436) #23	LDHA (ENSPPYG00000003437) ##24	GTF2H1 (ENSPPYG00000003438) #25	HPS5 (ENSPPYG00000003439) #27	ENSPPYG00000036972	SAA2 (ENSPPYG00000003440)	SAA4 (ENSPPYG00000031722)	MRGPRX4 (ENSPPYG00000039348) ##15	ENSPPYG00000003442	MRGPRX3 (ENSPPYG00000038501) ##15	SAAL1 (ENSPPYG00000039447)	TPH1 (ENSPPYG00000003445)	SERGEF (ENSPPYG00000003446)	KCNC1 (ENSPPYG00000003448)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	20	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00910000144115.a.lb	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b.db	ENSGT00390000004737.b.a.o.a.b.c.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00940000155622.f	ENSGT00940000155182.b.e.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684
Gorilla	MODERN SPECIES	2	NAV2 (ENSGGOG00000006949)	ENSGGOG00000042400	E2F8 (ENSGGOG00000011430)	CSRP3 (ENSGGOG00000004823)	ZDHHC13 (ENSGGOG00000004817)	MRGPRX2 (ENSGGOG00000015832) ##15	ENSGGOG00000024277 ##15	ENSGGOG00000025813 ##15	PTPN5 (ENSGGOG00000007218) #16	IGSF22 (ENSGGOG00000007208)	TMEM86A (ENSGGOG00000007204) #17	ENSGGOG00000041151	SPTY2D1 (ENSGGOG00000010379) #18	ENSGGOG00000043165	UEVLD (ENSGGOG00000010367) #21	TSG101 (ENSGGOG00000010359) #22	LDHAL6A (ENSGGOG00000039584)	LDHC (ENSGGOG00000015884) #23	LDHA (ENSGGOG00000010350) ##24	GTF2H1 (ENSGGOG00000008405) #25	HPS5 (ENSGGOG00000010309) #27	ENSGGOG00000006531	ENSGGOG00000010297	SAA2 (ENSGGOG00000010301)	SAA4 (ENSGGOG00000003359)	ENSGGOG00000025669	ENSGGOG00000039414	MRGPRX4 (ENSGGOG00000016538) ##15	TPH1 (ENSGGOG00000009041)	SERGEF (ENSGGOG00000000685)	KCNC1 (ENSGGOG00000015717)
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00910000144115.a.lb	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b.cb.a	ENSGT00390000004737.b.a.o.a.b.c.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00940000155622.f	ENSGT00940000155182.b.e.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684
Human	MODERN SPECIES	2	PRMT3 (ENSG00000185238)	HTATIP2 (ENSG00000109854)	DBX1 (ENSG00000109851)	NAV2 (ENSG00000166833)	E2F8 (ENSG00000129173)	CSRP3 (ENSG00000129170)	ZDHHC13 (ENSG00000177054)	MRGPRX2 (ENSG00000183695) ##15	MRGPRX1 (ENSG00000170255) ##15	PTPN5 (ENSG00000110786) #16	IGSF22 (ENSG00000179057)	TMEM86A (ENSG00000151117) #17	SPTY2D1 (ENSG00000179119) #18	MISFA (ENSG00000247595)	UEVLD (ENSG00000151116) #21	TSG101 (ENSG00000074319) #22	LDHAL6A (ENSG00000166800)	LDHC (ENSG00000166796) #23	LDHA (ENSG00000134333) ##24	GTF2H1 (ENSG00000110768) #25	HPS5 (ENSG00000110756) #27	SAA1 (ENSG00000173432)	SAA2 (ENSG00000134339)	SAA2-SAA4 (ENSG00000255071)	SAA4 (ENSG00000148965)	MRGPRX4 (ENSG00000179817) ##15	MRGPRX3 (ENSG00000179826) ##15	SAAL1 (ENSG00000166788)	TPH1 (ENSG00000129167)	SERGEF (ENSG00000129158)	KCNC1 (ENSG00000129159)
Pan	ANCESTRAL SPECIES	1	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00910000144115.a.lb	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b.cb.a	ENSGT00390000001347.wb	ENSGT00390000004737.b.a.o.a.b.c.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00940000155622.f	ENSGT00940000155182.b.e.b	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a
Bonobo	MODERN SPECIES	2	ENSPPAG00000038816	NAV2 (ENSPPAG00000033637)	E2F8 (ENSPPAG00000034910)	CSRP3 (ENSPPAG00000034864)	ZDHHC13 (ENSPPAG00000044061)	MRGPRX2 (ENSPPAG00000020811) ##15	MRGPRX1 (ENSPPAG00000021579) ##15	PTPN5 (ENSPPAG00000029191) #16	IGSF22 (ENSPPAG00000041033)	TMEM86A (ENSPPAG00000030156) #17	ENSPPAG00000028152	SPTY2D1 (ENSPPAG00000032171) #18	ENSPPAG00000021694	ENSPPAG00000028789	UEVLD (ENSPPAG00000028010) #21	TSG101 (ENSPPAG00000032909) #22	LDHAL6A (ENSPPAG00000021825)	LDHC (ENSPPAG00000038065) #23	LDHA (ENSPPAG00000043477) ##24	GTF2H1 (ENSPPAG00000029804) #25	HPS5 (ENSPPAG00000039372) #27	SAA1 (ENSPPAG00000039165)	ENSPPAG00000041426	ENSPPAG00000031094	SAA4 (ENSPPAG00000036586)	ENSPPAG00000039649	MRGPRX4 (ENSPPAG00000008504) ##15	MRGPRX3 (ENSPPAG00000011150) ##15	SAAL1 (ENSPPAG00000035982)	TPH1 (ENSPPAG00000038830)	ENSPPAG00000041411
Chimpanzee	MODERN SPECIES	2	ENSPTRG00000043037	NAV2 (ENSPTRG00000003436)	E2F8 (ENSPTRG00000003435)	CSRP3 (ENSPTRG00000003434)	ZDHHC13 (ENSPTRG00000003433)	MRGPRX2 (ENSPTRG00000003432) ##15	MRGPRX1 (ENSPTRG00000051611) ##15	PTPN5 (ENSPTRG00000003430) #16	IGSF22 (ENSPTRG00000003429)	TMEM86A (ENSPTRG00000003428) #17	ENSPTRG00000041876	SPTY2D1 (ENSPTRG00000003426) #18	ENSPTRG00000049900	ENSPTRG00000045305	UEVLD (ENSPTRG00000003425) #21	TSG101 (ENSPTRG00000003424) #22	LDHAL6A (ENSPTRG00000003423)	LDHC (ENSPTRG00000003422) #23	LDHA (ENSPTRG00000003421) ##24	GTF2H1 (ENSPTRG00000003420) #25	HPS5 (ENSPTRG00000003419) #27	SAA1 (ENSPTRG00000022627)	ENSPTRG00000052833	SAA2 (ENSPTRG00000003416)	SAA4 (ENSPTRG00000003415)	ENSPTRG00000050361	ENSPTRG00000039747	MRGPRX4 (ENSPTRG00000045402) ##15	MRGPRX3 (ENSPTRG00000052640) ##15	SAAL1 (ENSPTRG00000003410)	TPH1 (ENSPTRG00000003409)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b.a.a.a.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00940000155622.f	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Rhinopithecus	ANCESTRAL SPECIES	188	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00390000003721.d.a.c.b	ENSGT00940000153201.j.k.a.a.b.a.a.a.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00940000155622.f	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00390000004737.b.a.o.a.a.b
Golden snub-nosed monkey	MODERN SPECIES	1485										PTPN5 (ENSRROG00000034386) #16	IGSF22 (ENSRROG00000033236)	TMEM86A (ENSRROG00000039497) #17	SPTY2D1 (ENSRROG00000038958) #18	ENSRROG00000029345	UEVLD (ENSRROG00000043503) #21	TSG101 (ENSRROG00000007381) #22	LDHAL6A (ENSRROG00000041316)	ENSRROG00000029002	LDHC (ENSRROG00000025865) #23	ENSRROG00000034244 ##24	GTF2H1 (ENSRROG00000044245) #25	HPS5 (ENSRROG00000045543) #27	ENSRROG00000032522	SAA4 (ENSRROG00000041678)	ENSRROG00000030356	MRGPRX3 (ENSRROG00000022175) ##15	ENSRROG00000042459	SAAL1 (ENSRROG00000035972)	TPH1 (ENSRROG00000040674)	SERGEF (ENSRROG00000044406)	KCNC1 (ENSRROG00000025905)
Black snub-nosed monkey	MODERN SPECIES	167	SLC6A5 (ENSRBIG00000041447)	PRMT3 (ENSRBIG00000032769)	HTATIP2 (ENSRBIG00000040284)	DBX1 (ENSRBIG00000027962)	ENSRBIG00000041586	NAV2 (ENSRBIG00000035173)	E2F8 (ENSRBIG00000042597)	CSRP3 (ENSRBIG00000032571)	ZDHHC13 (ENSRBIG00000037316)	PTPN5 (ENSRBIG00000030553) #16	IGSF22 (ENSRBIG00000037442)	TMEM86A (ENSRBIG00000027698) #17	SPTY2D1 (ENSRBIG00000037131) #18	ENSRBIG00000034293	UEVLD (ENSRBIG00000030739) #21	TSG101 (ENSRBIG00000043582) #22	LDHAL6A (ENSRBIG00000037637)	ENSRBIG00000029108	LDHC (ENSRBIG00000039182) #23	ENSRBIG00000003809 ##24	GTF2H1 (ENSRBIG00000027586) #25	HPS5 (ENSRBIG00000030954) #27	ENSRBIG00000041504
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b.a.a.a.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.a ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Vervet Monkey	MODERN SPECIES		SLC6A5 (ENSCSAG00000005149)	PRMT3 (ENSCSAG00000005127)	HTATIP2 (ENSCSAG00000005121)	DBX1 (ENSCSAG00000005115)	NAV2 (ENSCSAG00000005106)	E2F8 (ENSCSAG00000005093)	CSRP3 (ENSCSAG00000005088)	ZDHHC13 (ENSCSAG00000005077)	MRGPRX2 (ENSCSAG00000019321) ##15	MRGPRX1 (ENSCSAG00000019322) ##15	PTPN5 (ENSCSAG00000005069) #16	IGSF22 (ENSCSAG00000005064)	TMEM86A (ENSCSAG00000005058) #17	SPTY2D1 (ENSCSAG00000005056) #18	UEVLD (ENSCSAG00000005052) #21	TSG101 (ENSCSAG00000005050) #22	LDHAL6A (ENSCSAG00000005046)	LDHC (ENSCSAG00000005043) #23	ENSCSAG00000005035 ##24	GTF2H1 (ENSCSAG00000005008) #25	HPS5 (ENSCSAG00000005000) #27	ENSCSAG00000004969	ENSCSAG00000004965	SAA4 (ENSCSAG00000004962)	MRGPRX4 (ENSCSAG00000004961) ##15	ENSCSAG00000004958 ##15	ENSCSAG00000019323 ##15	SAAL1 (ENSCSAG00000004954)	TPH1 (ENSCSAG00000004950)	SERGEF (ENSCSAG00000004946)	KCNC1 (ENSCSAG00000004936)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b.a.a.a.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b.d	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490
Macaca	ANCESTRAL SPECIES	2	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b.a.a.a.a ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b.v	ENSGT00390000004737.b.a.o.a.a.b.w	ENSGT00390000004737.b.a.o.a.b.d	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.i ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.a.a ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00970000193605 #20	ENSGT01100000263539.a.a.b.a.a.a.a.a.a	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b.a.a.a.b.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b.v	ENSGT00390000004737.b.a.o.a.a.b.w	ENSGT00390000004737.b.a.o.a.b.d	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.b ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Crab-eating macaque	MODERN SPECIES	5	ENSMFAG00000061124	ENSMFAG00000065444	E2F8 (ENSMFAG00000046393)	CSRP3 (ENSMFAG00000020396)	ZDHHC13 (ENSMFAG00000044093)	MRGPRX2 (ENSMFAG00000053055) ##15	ENSMFAG00000058700 ##15	MRGPRX1 (ENSMFAG00000061091) ##15	PTPN5 (ENSMFAG00000034300) #16	IGSF22 (ENSMFAG00000000462)	TMEM86A (ENSMFAG00000060167) #17	SPTY2D1 (ENSMFAG00000044194) #18	ENSMFAG00000001697 #20	ENSMFAG00000051133	ENSMFAG00000000553 #23	TSG101 (ENSMFAG00000032321) #22	ENSMFAG00000058819	LDHAL6A (ENSMFAG00000050157)	LDHC (ENSMFAG00000003940) #23	ENSMFAG00000027126	ENSMFAG00000054002 ##24	GTF2H1 (ENSMFAG00000032995) #25	HPS5 (ENSMFAG00000044104) #27	ENSMFAG00000025977	SAA2 (ENSMFAG00000044536)	SAA4 (ENSMFAG00000038106)	MRGPRX4 (ENSMFAG00000056317) ##15	MRGPRX3 (ENSMFAG00000052090) ##15	SAAL1 (ENSMFAG00000037334)	ENSMFAG00000065213	SERGEF (ENSMFAG00000000777)
Rhesus	MODERN SPECIES	5	PRMT3 (ENSMMUG00000010719)	DBX1 (ENSMMUG00000040777)	NAV2 (ENSMMUG00000016942)	ENSMMUG00000064922	E2F8 (ENSMMUG00000010853)	CSRP3 (ENSMMUG00000019119)	ZDHHC13 (ENSMMUG00000007041)	MRGPRX1 (ENSMMUG00000060151) ##15	PTPN5 (ENSMMUG00000007133) #16	IGSF22 (ENSMMUG00000063818)	TMEM86A (ENSMMUG00000041731) #17	SPTY2D1 (ENSMMUG00000019329) #18	MISFA (ENSMMUG00000044847)	ENSMMUG00000064700	UEVLD (ENSMMUG00000000336) #21	TSG101 (ENSMMUG00000014613) #22	LDHAL6A (ENSMMUG00000014614)	LDHC (ENSMMUG00000014615) #23	LDHA (ENSMMUG00000031024) ##24	GTF2H1 (ENSMMUG00000017959) #25	HPS5 (ENSMMUG00000017958) #27	ENSMMUG00000060306	ENSMMUG00000011177	SAA4 (ENSMMUG00000017960)	MRGPRX4 (ENSMMUG00000055303) ##15	ENSMMUG00000054997	MRGPRX3 (ENSMMUG00000060779) ##15	SAAL1 (ENSMMUG00000014377)	TPH1 (ENSMMUG00000006096)	SERGEF (ENSMMUG00000006405)	KCNC1 (ENSMMUG00000006403)
Pig-tailed macaque	MODERN SPECIES	131	HTATIP2 (ENSMNEG00000030788)	DBX1 (ENSMNEG00000041763)	ENSMNEG00000027094	ENSMNEG00000021455	NAV2 (ENSMNEG00000043339)	ENSMNEG00000045165	E2F8 (ENSMNEG00000040013)	CSRP3 (ENSMNEG00000033382)	ZDHHC13 (ENSMNEG00000037030)	PTPN5 (ENSMNEG00000032650) #16	IGSF22 (ENSMNEG00000035177)	TMEM86A (ENSMNEG00000041047) #17	SPTY2D1 (ENSMNEG00000038544) #18	ENSMNEG00000044112	UEVLD (ENSMNEG00000034421) #21	TSG101 (ENSMNEG00000041853) #22	LDHAL6A (ENSMNEG00000041126)	ENSMNEG00000024949	LDHC (ENSMNEG00000033782) #23	ENSMNEG00000042413 ##24	GTF2H1 (ENSMNEG00000036878) #25	ENSMNEG00000042089	HPS5 (ENSMNEG00000030883) #27	SAA2 (ENSMNEG00000041389)	SAA4 (ENSMNEG00000043404)	ENSMNEG00000035570	SAAL1 (ENSMNEG00000021954)	TPH1 (ENSMNEG00000028667)	SERGEF (ENSMNEG00000043939)	KCNC1 (ENSMNEG00000029034)	MYOD1 (ENSMNEG00000044032)
Cercopithecinae_b	ANCESTRAL SPECIES	27	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00910000147178	ENSGT00950000182891.a.a.b.a.b.b.b.o	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.a.a ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b.a.a.a.b ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b.y	ENSGT00390000004737.b.a.o.a.a.b.x	ENSGT00390000004737.b.a.o.a.b.d	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.a ##15	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.b.b ##15	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Olive baboon	MODERN SPECIES	3	ENSPANG00000029965	NAV2 (ENSPANG00000017038)	E2F8 (ENSPANG00000005225)	CSRP3 (ENSPANG00000005742)	ZDHHC13 (ENSPANG00000026209)	MRGPRX2 (ENSPANG00000044494) ##15	ENSPANG00000048137	PTPN5 (ENSPANG00000019133) #16	IGSF22 (ENSPANG00000025559)	TMEM86A (ENSPANG00000047838) #17	ENSPANG00000051041	SPTY2D1 (ENSPANG00000007552) #18	ENSPANG00000040640	UEVLD (ENSPANG00000007976) #21	ENSPANG00000044560	TSG101 (ENSPANG00000005375) #22	LDHAL6A (ENSPANG00000008347)	ENSPANG00000047131	LDHC (ENSPANG00000025849) #23	LDHA (ENSPANG00000019081) ##24	GTF2H1 (ENSPANG00000002504) #25	HPS5 (ENSPANG00000000205) #27	ENSPANG00000025709	SAA4 (ENSPANG00000012057)	ENSPANG00000040114 ##15	ENSPANG00000044809 ##15	SAAL1 (ENSPANG00000006539)	TPH1 (ENSPANG00000007046)	SERGEF (ENSPANG00000025793)	KCNC1 (ENSPANG00000015328)	MYOD1 (ENSPANG00000011946)
Cercopithecinae_d	ANCESTRAL SPECIES	99							ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.j.a.a.a.a ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j.k.a.a.b.a.a.a.a ##24	ENSGT00390000015066.c #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b.y	ENSGT00390000004737.b.a.o.a.a.b.x	ENSGT00390000004737.b.a.o.a.b.d	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Drill	MODERN SPECIES	1100																TSG101 (ENSMLEG00000036515) #22	LDHAL6A (ENSMLEG00000041786)	LDHC (ENSMLEG00000028242) #23	ENSMLEG00000003699 ##24	GTF2H1 (ENSMLEG00000042426) #25	HPS5 (ENSMLEG00000035748) #27	ENSMLEG00000028344	ENSMLEG00000028895	SAA4 (ENSMLEG00000032527)	SAAL1 (ENSMLEG00000012869)	TPH1 (ENSMLEG00000032014)	SERGEF (ENSMLEG00000042345)	KCNC1 (ENSMLEG00000033839)	MYOD1 (ENSMLEG00000031495)	OTOG (ENSMLEG00000027393)	USH1C (ENSMLEG00000038490)
Sooty mangabey	MODERN SPECIES	290							CSRP3 (ENSCATG00000030525)	ZDHHC13 (ENSCATG00000009429)	ENSCATG00000035106 ##15	PTPN5 (ENSCATG00000015959) #16	IGSF22 (ENSCATG00000042436)	TMEM86A (ENSCATG00000029000) #17	SPTY2D1 (ENSCATG00000036164) #18	ENSCATG00000033511	UEVLD (ENSCATG00000038967) #21	TSG101 (ENSCATG00000009882) #22	LDHAL6A (ENSCATG00000032545)	ENSCATG00000039048 ##24	GTF2H1 (ENSCATG00000035696) #25	HPS5 (ENSCATG00000035219) #27	ENSCATG00000031928	ENSCATG00000043701	SAA4 (ENSCATG00000033584)	SAAL1 (ENSCATG00000028077)	TPH1 (ENSCATG00000040162)	SERGEF (ENSCATG00000039738)	KCNC1 (ENSCATG00000031951)	MYOD1 (ENSCATG00000031639)	OTOG (ENSCATG00000036498)	USH1C (ENSCATG00000025153)	ABCC8 (ENSCATG00000031694)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT01030000235549	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Eulipotyphla	ANCESTRAL SPECIES	46														ENSGT00940000154133.A #18	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT00390000015066 #25
Hedgehog	MODERN SPECIES	4154																TSG101 (ENSEEUG00000004924) #22	LDHAL6A (ENSEEUG00000004902)	LDHC (ENSEEUG00000004634) #23	LDHA (ENSEEUG00000004603) #24
Common shrew	MODERN SPECIES	832														SPTY2D1 (ENSSARG00000001287) #18	UEVLD (ENSSARG00000001266) #21	TSG101 (ENSSARG00000001249) #22	LDHC (ENSSARG00000001238) #23	LDHA (ENSSARG00000001224) #24	GTF2H1 (ENSSARG00000001210) #25	ENSSARG00000001190	HPS5 (ENSSARG00000001180) #27
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT01030000235549	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT01030000235549	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Suina	ANCESTRAL SPECIES	34	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT01030000235549	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Chacoan peccary	MODERN SPECIES	919	SLC6A5 (ENSCWAG00000007819)	PRMT3 (ENSCWAG00000007978)	HTATIP2 (ENSCWAG00000008210)	DBX1 (ENSCWAG00000008345)	NAV2 (ENSCWAG00000008613)	E2F8 (ENSCWAG00000013295)	CSRP3 (ENSCWAG00000013430)	ZDHHC13 (ENSCWAG00000013556)	ENSCWAG00000013674 ##15	PTPN5 (ENSCWAG00000013752) #16	IGSF22 (ENSCWAG00000014237)	TMEM86A (ENSCWAG00000014433) #17	SPTY2D1 (ENSCWAG00000014459) #18	ENSCWAG00000014496	ENSCWAG00000014527 #21	TSG101 (ENSCWAG00000014545) #22	LDHC (ENSCWAG00000014623) #23	ENSCWAG00000015128	ENSCWAG00000015145 #24	ENSCWAG00000015174	GTF2H1 (ENSCWAG00000015209) #25	HPS5 (ENSCWAG00000015353) #27	SAA4 (ENSCWAG00000015410)	ENSCWAG00000015451	SAAL1 (ENSCWAG00000015499)	TPH1 (ENSCWAG00000015561)	SERGEF (ENSCWAG00000015651)	KCNC1 (ENSCWAG00000015694)	MYOD1 (ENSCWAG00000015755)	OTOG (ENSCWAG00000015797)	USH1C (ENSCWAG00000016103)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT01030000235549	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Camelidae	ANCESTRAL SPECIES	25	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00910000147241	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT01030000235549	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00990000212997	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Alpaca	MODERN SPECIES	296													TMEM86A (ENSVPAG00000010221) #17	SPTY2D1 (ENSVPAG00000010220) #18	UEVLD (ENSVPAG00000010219) #21	TSG101 (ENSVPAG00000010218) #22	LDHAL6A (ENSVPAG00000010217)	LDHC (ENSVPAG00000010216) #23	LDHA (ENSVPAG00000010215) #24	GTF2H1 (ENSVPAG00000010213) #25	HPS5 (ENSVPAG00000010212) #27	ENSVPAG00000010210	SAAL1 (ENSVPAG00000010209)	TPH1 (ENSVPAG00000010206)	SERGEF (ENSVPAG00000010204)
Arabian camel	MODERN SPECIES	1	SLC6A5 (ENSCDRG00005009100)	PRMT3 (ENSCDRG00005009301)	HTATIP2 (ENSCDRG00005009706)	DBX1 (ENSCDRG00005009814)	NAV2 (ENSCDRG00005009941)	ENSCDRG00005010656	E2F8 (ENSCDRG00005010690)	CSRP3 (ENSCDRG00005010820)	ZDHHC13 (ENSCDRG00005010952)	ENSCDRG00005011022 ##15	PTPN5 (ENSCDRG00005011174) #16	TMEM86A (ENSCDRG00005011463) #17	SPTY2D1 (ENSCDRG00005011497) #18	ENSCDRG00005011524	UEVLD (ENSCDRG00005011579) #21	TSG101 (ENSCDRG00005011857) #22	LDHC (ENSCDRG00005012071) #23	ENSCDRG00005013169 #24	ENSCDRG00005013197	GTF2H1 (ENSCDRG00005013223) #25	HPS5 (ENSCDRG00005013369) #27	ENSCDRG00005013545	ENSCDRG00005013613	SAAL1 (ENSCDRG00005013646)	TPH1 (ENSCDRG00005013726)	SERGEF (ENSCDRG00005013823)	KCNC1 (ENSCDRG00005013940)	MYOD1 (ENSCDRG00005014006)	OTOG (ENSCDRG00005014084)	USH1C (ENSCDRG00005014521)	ABCC8 (ENSCDRG00005014728)
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b
Pecora	DUPLICATION
Pecora	DUPLICATION
Pecora	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.a #22
Yarkand deer	MODERN SPECIES	11	PRMT3 (ENSCHYG00000010820)	ENSCHYG00000011190	ENSCHYG00000011455	DBX1 (ENSCHYG00000011489)	NAV2 (ENSCHYG00000011779)	E2F8 (ENSCHYG00000016190)	CSRP3 (ENSCHYG00000016300)	ZDHHC13 (ENSCHYG00000016429)	ENSCHYG00000016803 ##15	PTPN5 (ENSCHYG00000016835) #16	TMEM86A (ENSCHYG00000017014) #17	SPTY2D1 (ENSCHYG00000017059) #18	MISFA (ENSCHYG00000017128)	UEVLD (ENSCHYG00000017172) #21	ENSCHYG00000017450	ENSCHYG00000017501 #22	LDHC (ENSCHYG00000018080) #23	ENSCHYG00000018608 #24	GTF2H1 (ENSCHYG00000019337) #25	HPS5 (ENSCHYG00000019515) #27	ENSCHYG00000020233	SAA4 (ENSCHYG00000020291)	ENSCHYG00000020339	ENSCHYG00000020374	ENSCHYG00000020410	ENSCHYG00000020435	OR4D5 (ENSCHYG00000020491)	ENSCHYG00000020518	OR10S1 (ENSCHYG00000020561)	OR10G6 (ENSCHYG00000020583)	ENSCHYG00000020602
Percora_a	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.a #22
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	1224	HTATIP2 (ENSMMSG00000022848)	ENSMMSG00000022836	DBX1 (ENSMMSG00000022828)	NAV2 (ENSMMSG00000022421)	ENSMMSG00000022344	E2F8 (ENSMMSG00000022333)	CSRP3 (ENSMMSG00000022318)	ZDHHC13 (ENSMMSG00000022294)	ENSMMSG00000022286 ##15	PTPN5 (ENSMMSG00000022223) #16	TMEM86A (ENSMMSG00000022196) #17	SPTY2D1 (ENSMMSG00000022187) #18	ENSMMSG00000022175	MISFA (ENSMMSG00000022162)	UEVLD (ENSMMSG00000022084) #21	ENSMMSG00000022013 #22	LDHC (ENSMMSG00000021972) #23	LDHA (ENSMMSG00000021827) #24	GTF2H1 (ENSMMSG00000021771) #25	HPS5 (ENSMMSG00000021689) #27	ENSMMSG00000021661	ENSMMSG00000021636	ENSMMSG00000021614	SAA4 (ENSMMSG00000021593)	ENSMMSG00000021585	ENSMMSG00000021574	ENSMMSG00000021570	ENSMMSG00000021557	ENSMMSG00000021549	ENSMMSG00000021489	ENSMMSG00000021465
Siberian musk deer	MODERN SPECIES	70	HACD3 (ENSMMSG00000000485)	ENSMMSG00000000445	DPP8 (ENSMMSG00000000258)	IGDCC4 (ENSMMSG00000000147)	IGDCC3 (ENSMMSG00000000099)	PARP16 (ENSMMSG00000019586)	CILP (ENSMMSG00000019540)	CLPX (ENSMMSG00000019476)	PDCD7 (ENSMMSG00000019450)	UBAP1L (ENSMMSG00000019405)	KBTBD13 (ENSMMSG00000019390)	RASL12 (ENSMMSG00000019343)	SLC51B (ENSMMSG00000019303)	MTFMT (ENSMMSG00000019272)	SPG21 (ENSMMSG00000019185)	ENSMMSG00000019166 #22	PTGER2 (ENSMMSG00000019132)	TXNDC16 (ENSMMSG00000019070)	GPR137C (ENSMMSG00000018995)	ERO1A (ENSMMSG00000018893)	PSMC6 (ENSMMSG00000018802)	STYX (ENSMMSG00000018735)	GNPNAT1 (ENSMMSG00000018679)	ENSMMSG00000018656	SERINC5 (ENSMMSG00000018616)	ENSMMSG00000018594	THBS4 (ENSMMSG00000018524)	MTX3 (ENSMMSG00000018473)	ENSMMSG00000018450	CMYA5 (ENSMMSG00000018378)	TENT2 (ENSMMSG00000018319)
Bovidae	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.a #22
Caprinae	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.a #22
Goat	MODERN SPECIES	11	CCDC93 (ENSCHIG00000013749)	INSIG2 (ENSCHIG00000017903)	ENSCHIG00000005523	ENSCHIG00000021503	EN1 (ENSCHIG00000017355)	ENSCHIG00000024655	C1QL2 (ENSCHIG00000018522)	ENSCHIG00000010820	STEAP3 (ENSCHIG00000020375)	C2orf76 (ENSCHIG00000017290)	DBI (ENSCHIG00000015289)	TMEM37 (ENSCHIG00000008579)	SCTR (ENSCHIG00000023110)	CFAP221 (ENSCHIG00000017692)	TMEM177 (ENSCHIG00000013456)	ENSCHIG00000021745 #22	PTPN4 (ENSCHIG00000012348)	ENSCHIG00000018796	ENSCHIG00000014138	ENSCHIG00000009337	TMEM185B (ENSCHIG00000012850)	RALB (ENSCHIG00000019125)	INHBB (ENSCHIG00000024398)	GLI2 (ENSCHIG00000017600)	TFCP2L1 (ENSCHIG00000014608)	ENSCHIG00000010032	CLASP1 (ENSCHIG00000022334)	NIFK (ENSCHIG00000010512)	TSN (ENSCHIG00000010715)	ENSCHIG00000020518	ENSCHIG00000012076
Bovinae	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.a #22
American bison	MODERN SPECIES	1907																ENSBBBG00000019746 #22
Pecora	ANCESTRAL SPECIES	13	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00390000016292.i.b	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.k.b #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT01010000222320.a.a.a.b.h.b.b.a.a.b.b	ENSGT01010000222320.a.a.a.a.a	ENSGT01010000222320.a.b.a.a	ENSGT01010000222320.a.b.b	ENSGT01010000222320.a.a.b.a.c	ENSGT01010000222320.a.a.b.a.d.b.b	ENSGT01010000222320.a.a.b.a.d.b.a	ENSGT01040000240383.a.b.g.b	ENSGT01040000240383.a.b.g.a.a
Yarkand deer	MODERN SPECIES	31	MARS2 (ENSCHYG00000013177)	BOLL (ENSCHYG00000012765)	PLCL1 (ENSCHYG00000012427)	ENSCHYG00000012371	SATB2 (ENSCHYG00000012100)	ENSCHYG00000011965	C2orf69 (ENSCHYG00000011903)	TYW5 (ENSCHYG00000011850)	MAIP1 (ENSCHYG00000011759)	ENSCHYG00000011736	SPATS2L (ENSCHYG00000011390)	KCTD18 (ENSCHYG00000011325)	SGO2 (ENSCHYG00000011236)	AOX1 (ENSCHYG00000010517)	ENSCHYG00000010452	ENSCHYG00000010410 #22	ENSCHYG00000009851	ENSCHYG00000009654	BZW1 (ENSCHYG00000009251)	ENSCHYG00000004999	CLK1 (ENSCHYG00000004911)	PPIL3 (ENSCHYG00000004901)	NIF3L1 (ENSCHYG00000004879)	ORC2 (ENSCHYG00000004839)	HYCC2 (ENSCHYG00000004790)	ENSCHYG00000004767	CFLAR (ENSCHYG00000004722)	CASP8 (ENSCHYG00000004683)	FLACC1 (ENSCHYG00000004659)	TRAK2 (ENSCHYG00000004632)	STRADB (ENSCHYG00000004596)
Percora_a	ANCESTRAL SPECIES	16	ENSGT00390000008184	ENSGT00390000016292.i.b	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000248204	ENSGT01100000266516	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.k.b #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a.p.b	ENSGT00390000004737.b.a.o.a.a.a.a.p.a	ENSGT00390000004737.b.a.o.a.a.a.a.o	ENSGT00390000004737.b.a.o.a.b	ENSGT01010000222320.a.a.a.b.h.b.b.a.b	ENSGT01050000244869.a.a.b	ENSGT01050000244869.a.a.a.a	ENSGT01050000244869.b.qb.b	ENSGT01050000244869.a.a.a.b.a.a.b.b	ENSGT01050000244869.a.a.a.b.a.a.b.a.d	ENSGT01050000244869.a.a.a.b.a.a.a.a.a
Bovidae	ANCESTRAL SPECIES	16	ENSGT00390000008184	ENSGT00390000016292.i.b	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000248204	ENSGT01100000266516	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.k.b #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a.o	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.a.p.b	ENSGT01090000260086.B.a.a.c.a.a	ENSGT01090000260086.B.a.a.c.a.b	ENSGT01090000260086.B.a.a.d	ENSGT01090000260086.B.a.b	ENSGT01040000240383.b.a.b	ENSGT00940000163057	ENSGT01090000260086.A.c.a.a	ENSGT01010000222320.a.a.a.a.b.f.a
Caprinae	ANCESTRAL SPECIES	29	ENSGT00390000008184	ENSGT00390000016292.i.b	ENSGT00940000163089.b.x.b.b	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000266516	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.k.b #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a.p.b.e	ENSGT00390000004737.b.a.o.a.a.a.a.p.a	ENSGT00390000004737.b.a.o.a.a.a.a.o	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.a.p.b.f	ENSGT01090000260086.B.a.a.c.a.a	ENSGT01090000260086.B.a.a.c.a.b	ENSGT01090000260086.B.a.a.d	ENSGT01090000260086.B.a.b	ENSGT01040000240383.b.a.b	ENSGT00940000163057
Goat	MODERN SPECIES	21	HTATIP2 (ENSCHIG00000024838)	ENSCHIG00000015616	ENSCHIG00000007650	DBX1 (ENSCHIG00000023301)	NAV2 (ENSCHIG00000000920)	E2F8 (ENSCHIG00000023407)	CSRP3 (ENSCHIG00000023005)	ZDHHC13 (ENSCHIG00000024992)	ENSCHIG00000020480 ##15	PTPN5 (ENSCHIG00000008345) #16	TMEM86A (ENSCHIG00000020591) #17	SPTY2D1 (ENSCHIG00000020220) #18	MISFA (ENSCHIG00000005517)	ENSCHIG00000024305	ENSCHIG00000024712	ENSCHIG00000013413 #22	LDHC (ENSCHIG00000013476) #23	LDH-A (ENSCHIG00000018372) #24	GTF2H1 (ENSCHIG00000014725) #25	HPS5 (ENSCHIG00000009350) #27	ENSCHIG00000022162	ENSCHIG00000016791	ENSCHIG00000022653	SAA4 (ENSCHIG00000023600)	ENSCHIG00000012548	ENSCHIG00000020533	ENSCHIG00000003817	ENSCHIG00000019742	ENSCHIG00000007311	OR8D4 (ENSCHIG00000008168)	OR4D5 (ENSCHIG00000022238)
Rambouillet Sheep	MODERN SPECIES	13	ENSOARG00020025682	DBX1 (ENSOARG00020025685)	NAV2 (ENSOARG00020025736)	E2F8 (ENSOARG00020025926)	ENSOARG00020025934	CSRP3 (ENSOARG00020025944)	ZDHHC13 (ENSOARG00020025951)	ENSOARG00020025964 ##15	PTPN5 (ENSOARG00020025965) #16	TMEM86A (ENSOARG00020025974) #17	SPTY2D1 (ENSOARG00020025977) #18	ENSOARG00020025980	ENSOARG00020025982	UEVLD (ENSOARG00020026000) #21	ENSOARG00020026044	TSG101 (ENSOARG00020026047) #22	ENSOARG00020026053 #23	LDHA (ENSOARG00020026056) #24	GTF2H1 (ENSOARG00020026060) #25	HPS5 (ENSOARG00020026065) #27	ENSOARG00020026068	ENSOARG00020026070	ENSOARG00020026073	ENSOARG00020026078	ENSOARG00020026082	ENSOARG00020026085	ENSOARG00020026088	ENSOARG00020026089	ENSOARG00020012600	OR8D4 (ENSOARG00020012620)	OR4D5 (ENSOARG00020012654)
Bovinae	DUPLICATION
Bovinae	DUPLICATION
Bovinae	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.b.a.a #22
American bison	MODERN SPECIES	3103	H2AC6 (ENSBBBG00000006761)	ENSBBBG00000007868	H1-6 (ENSBBBG00000025458)	ENSBBBG00000008266	HFE (ENSBBBG00000025427)	H1-2 (ENSBBBG00000025348)	ENSBBBG00000025339	ENSBBBG00000025330	ENSBBBG00000025323	ENSBBBG00000025318	ENSBBBG00000006706	ENSBBBG00000025309	ENSBBBG00000025303	H1-1 (ENSBBBG00000007772)	TRIM38 (ENSBBBG00000025295)	ENSBBBG00000025278 #22	SLC17A2 (ENSBBBG00000025265)	SLC17A3 (ENSBBBG00000006673)	SLC17A1 (ENSBBBG00000007749)	SLC17A4 (ENSBBBG00000008071)	ENSBBBG00000008238	H2BC1 (ENSBBBG00000024995)	SCGN (ENSBBBG00000024988)	CARMIL1 (ENSBBBG00000024962)	ENSBBBG00000024875	RIPOR2 (ENSBBBG00000024682)	ARMH2 (ENSBBBG00000024330)	GMNN (ENSBBBG00000008707)	C6orf62 (ENSBBBG00000024286)	ACOT13 (ENSBBBG00000000283)	TDP2 (ENSBBBG00000024232)
Bovinae	DUPLICATION
Bovinae	ANCESTRAL SPECIES	27	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00390000016292.i.b	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.k.b.a.b.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u.i.b #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a.p.b	ENSGT00390000004737.b.a.o.a.a.a.a.o.b	ENSGT00390000004737.b.a.o.a.a.a.a.o.a	ENSGT00390000004737.b.a.o.a.b	ENSGT01090000260086.B.a.a.c.a.a	ENSGT01090000260086.B.a.a.c.a.b	ENSGT01090000260086.B.a.a.d	ENSGT01090000260086.B.a.b	ENSGT01040000240383.b.a.b	ENSGT00940000163057	ENSGT01010000222320.a.a.a.a.b.f.a
Bos	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.b.a.b.a #22
Bos_b	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.b.a.b.a #22
Hybrid Bos Indicus	MODERN SPECIES	21	ENSBIXG00005022254	HTATIP2 (ENSBIXG00005022339)	DBX1 (ENSBIXG00005022387)	ENSBIXG00005022396	ENSBIXG00005007225	NAV2 (ENSBIXG00005023131)	E2F8 (ENSBIXG00005023306)	CSRP3 (ENSBIXG00005023367)	ZDHHC13 (ENSBIXG00005023459)	ENSBIXG00005023495 ##15	PTPN5 (ENSBIXG00005023528) #16	TMEM86A (ENSBIXG00005004037) #17	SPTY2D1 (ENSBIXG00005023655) #18	ENSBIXG00005023672	UEVLD (ENSBIXG00005007235) #21	ENSBIXG00005007624 #22	LDHC (ENSBIXG00005023917) #23	ENSBIXG00005024064 #24	GTF2H1 (ENSBIXG00005004134) #25	HPS5 (ENSBIXG00005024315) #27	ENSBIXG00005004162	ENSBIXG00005024453	ENSBIXG00005004178	ENSBIXG00005024490	ENSBIXG00005004182	ENSBIXG00005024511	OR8D4 (ENSBIXG00005024533)	ENSBIXG00005024579	OR10S1 (ENSBIXG00005024588)	OR10G6 (ENSBIXG00005024593)	ENSBIXG00005024601
American bison	MODERN SPECIES	3302	HTATIP2 (ENSBBBG00000013427)	ENSBBBG00000013401	DBX1 (ENSBBBG00000013393)	NAV2 (ENSBBBG00000001584)	ENSBBBG00000001687	E2F8 (ENSBBBG00000013084)	CSRP3 (ENSBBBG00000013070)	ZDHHC13 (ENSBBBG00000013052)	ENSBBBG00000013032 ##15	PTPN5 (ENSBBBG00000013029) #16	TMEM86A (ENSBBBG00000002600) #17	SPTY2D1 (ENSBBBG00000013009) #18	ENSBBBG00000012981	MISFA (ENSBBBG00000012977)	UEVLD (ENSBBBG00000012967) #21	ENSBBBG00000002528 #22	LDHC (ENSBBBG00000012846) #23	ENSBBBG00000001786 #24	GTF2H1 (ENSBBBG00000002487) #25	HPS5 (ENSBBBG00000007648) #27	ENSBBBG00000012737	ENSBBBG00000012698	ENSBBBG00000012686	SAA4 (ENSBBBG00000002439)	ENSBBBG00000012666	ENSBBBG00000012663	OR8D4 (ENSBBBG00000002436)	OR4D5 (ENSBBBG00000012653)	OR10S1 (ENSBBBG00000002433)	OR10G6 (ENSBBBG00000002432)	ENSBBBG00000012644
Bovinae	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.b.a.b.b #22
Bos	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.b.a.b.b #22
Bos_b	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.b.a.b.b #22
Hybrid Bos Indicus	MODERN SPECIES	14	KLHDC8B (ENSBIXG00005011961)	CCDC71 (ENSBIXG00005000414)	ENSBIXG00005002536	LAMB2 (ENSBIXG00005016314)	USP19 (ENSBIXG00005017369)	QARS1 (ENSBIXG00005017449)	QRICH1 (ENSBIXG00005017495)	IMPDH2 (ENSBIXG00005002847)	NDUFAF3 (ENSBIXG00005002855)	DALRD3 (ENSBIXG00005017624)	P4HTM (ENSBIXG00005002875)	WDR6 (ENSBIXG00005017807)	ARIH2 (ENSBIXG00005002897)	ENSBIXG00005002903	ENSBIXG00005017902	ENSBIXG00005017935 #22	PRKAR2A (ENSBIXG00005018013)	IP6K2 (ENSBIXG00005018059)	NCKIPSD (ENSBIXG00005002932)	CELSR3 (ENSBIXG00005018136)	SLC26A6 (ENSBIXG00005018196)	TMEM89 (ENSBIXG00005018210)	ENSBIXG00005018217	UQCRC1 (ENSBIXG00005007288)	UCN2 (ENSBIXG00005005662)	ENSBIXG00005018733	PFKFB4 (ENSBIXG00005018806)	ENSBIXG00005006874	SHISA5 (ENSBIXG00005018853)	TREX1 (ENSBIXG00005018879)	ATRIP (ENSBIXG00005003099)
Bovinae	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.k.b.b #22
Bos	ANCESTRAL SPECIES	11	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00390000016292.i.b	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000248204	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.k.b.b #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u.i.a #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a.p.b.d	ENSGT00390000004737.b.a.o.a.a.a.a.o.b	ENSGT00390000004737.b.a.o.a.a.a.a.o.a	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.a.p.b.c	ENSGT01090000260086.B.a.a.c.a.a	ENSGT01090000260086.B.a.a.c.a.b	ENSGT01090000260086.B.a.a.d	ENSGT01090000260086.B.a.b	ENSGT01040000240383.b.a.b	ENSGT00940000163057
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00390000016292.i.b	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000248204	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.k.b.b #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u.i.a #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a.p.b.d	ENSGT00390000004737.b.a.o.a.a.a.a.o.b	ENSGT00390000004737.b.a.o.a.a.a.a.o.a	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.a.a.p.b.c	ENSGT01090000260086.B.a.a.c.a.a	ENSGT01090000260086.B.a.a.c.a.b	ENSGT01090000260086.B.a.a.d	ENSGT01090000260086.B.a.b	ENSGT01040000240383.b.a.b	ENSGT00940000163057
Cow	MODERN SPECIES	21	ENSBTAG00000048576	SLC6A5 (ENSBTAG00000014300)	PRMT3 (ENSBTAG00000013421)	HTATIP2 (ENSBTAG00000013419)	ENSBTAG00000008684	DBX1 (ENSBTAG00000002733)	NAV2 (ENSBTAG00000018431)	E2F8 (ENSBTAG00000017446)	CSRP3 (ENSBTAG00000011869)	ZDHHC13 (ENSBTAG00000020642)	MRGPRX2 (ENSBTAG00000002245) ##15	PTPN5 (ENSBTAG00000020257) #16	TMEM86A (ENSBTAG00000048059) #17	SPTY2D1 (ENSBTAG00000001660) #18	UEVLD (ENSBTAG00000013568) #21	TSG101 (ENSBTAG00000013563) #22	LDHC (ENSBTAG00000002488) #23	LDHA (ENSBTAG00000008683) #24	GTF2H1 (ENSBTAG00000005160) #25	HPS5 (ENSBTAG00000005147) #27	SAA3 (ENSBTAG00000049589)	ENSBTAG00000022395	SAA2 (ENSBTAG00000022394)	SAA4 (ENSBTAG00000002963)	M-SAA3.2 (ENSBTAG00000054278)	OR6M2 (ENSBTAG00000040020)	OR6M2C (ENSBTAG00000052437)	OR6M7 (ENSBTAG00000037485)	OR8D4 (ENSBTAG00000038802)	OR4D5 (ENSBTAG00000006634)	OR8B72 (ENSBTAG00000049492)
Bos_a	ANCESTRAL SPECIES	106							ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000266516	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.k.b.b #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u.i.b #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27
Wild yak	MODERN SPECIES	1200							E2F8 (ENSBMUG00000021434)	CSRP3 (ENSBMUG00000021458)	ZDHHC13 (ENSBMUG00000021491)	ENSBMUG00000021522 ##15	PTPN5 (ENSBMUG00000021545) #16	TMEM86A (ENSBMUG00000021555) #17	SPTY2D1 (ENSBMUG00000021567) #18	ENSBMUG00000021575	UEVLD (ENSBMUG00000021628) #21	TSG101 (ENSBMUG00000021667) #22	ENSBMUG00000021687 #23	ENSBMUG00000021774 #24	GTF2H1 (ENSBMUG00000021811) #25	HPS5 (ENSBMUG00000021851) #27	ENSBMUG00000021888
Domestic yak	MODERN SPECIES	16	H2AC6 (ENSBGRG00000016006)	ENSBGRG00000015917	ENSBGRG00000015895	HFE (ENSBGRG00000015583)	H1-2 (ENSBGRG00000015537)	ENSBGRG00000015501	ENSBGRG00000015470	H2BC3 (ENSBGRG00000015451)	H2AC4 (ENSBGRG00000015427)	ENSBGRG00000015411	ENSBGRG00000015388	ENSBGRG00000015354	ENSBGRG00000015308	H1-1 (ENSBGRG00000015287)	TRIM38 (ENSBGRG00000015165)	ENSBGRG00000015087 #22	SLC17A2 (ENSBGRG00000014879)	SLC17A3 (ENSBGRG00000014693)	SLC17A1 (ENSBGRG00000014550)	SLC17A4 (ENSBGRG00000014488)	ENSBGRG00000014466	ENSBGRG00000014416	SCGN (ENSBGRG00000014256)	CARMIL1 (ENSBGRG00000014134)	ENSBGRG00000013998	ENSBGRG00000013804	RIPOR2 (ENSBGRG00000013386)	ARMH2 (ENSBGRG00000013330)	GMNN (ENSBGRG00000023920)	C6orf62 (ENSBGRG00000023815)	ACOT13 (ENSBGRG00000023740)
Pecora	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.l #22
Percora_a	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.l #22
Bovidae	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.l #22
Bovinae	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.l #22
Bos	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.l #22
Bos_a	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.l #22
Domestic yak	MODERN SPECIES	12	WDR88 (ENSBGRG00000012742)	LRP3 (ENSBGRG00000012595)	SLC7A10 (ENSBGRG00000012434)	ENSBGRG00000012424	ENSBGRG00000012376	CEBPG (ENSBGRG00000012352)	PEPD (ENSBGRG00000011874)	CHST8 (ENSBGRG00000011805)	KCTD15 (ENSBGRG00000011698)	LSM14A (ENSBGRG00000011045)	GARRE1 (ENSBGRG00000010861)	GPI (ENSBGRG00000022167)	PDCD2L (ENSBGRG00000022086)	ENSBGRG00000022026	WTIP (ENSBGRG00000021906)	ENSBGRG00000021883 #22	ENSBGRG00000021783	ENSBGRG00000021728	ENSBGRG00000021684	ENSBGRG00000021636	ENSBGRG00000021609	ENSBGRG00000021563	ENSBGRG00000021528	ENSBGRG00000021504
Caprinae	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.l #22
Rambouillet Sheep	MODERN SPECIES	11	ENSOARG00020022402	DDX18 (ENSOARG00020022459)	ENSOARG00020022526	CCDC93 (ENSOARG00020022566)	Insig2 (ENSOARG00020022883)	EN1 (ENSOARG00020022915)	C1QL2 (ENSOARG00020022941)	STEAP3 (ENSOARG00020022977)	C2orf76 (ENSOARG00020023056)	DBI (ENSOARG00020023089)	TMEM37 (ENSOARG00020023172)	SCTR (ENSOARG00020023191)	CFAP221 (ENSOARG00020023250)	TMEM177 (ENSOARG00020023343)	PTPN4 (ENSOARG00020023367)	ENSOARG00020023578 #22	EPB41L5 (ENSOARG00020023616)	TMEM185B (ENSOARG00020023687)	RALB (ENSOARG00020023701)	INHBB (ENSOARG00020023725)	GLI2 (ENSOARG00020023763)	TFCP2L1 (ENSOARG00020023824)	ENSOARG00020023891	CLASP1 (ENSOARG00020023927)	ENSOARG00020024020	NIFK (ENSOARG00020024037)	TSN (ENSOARG00020024047)	ENSOARG00020024083	ENSOARG00020024099	ENSOARG00020006534	ENSOARG00020006557
Cetacea	DUPLICATION
Cetacea	DUPLICATION
Cetacea	ANCESTRAL SPECIES	4	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00940000164956	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.m.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.m.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.m.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00390000012981.rb.a.a	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.m.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00390000004147.d	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00390000012981.rb.a.a	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a.m.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.u #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b	ENSGT00940000163348.e
Beluga whale	MODERN SPECIES	32	SLC6A5 (ENSDLEG00000014762)	PRMT3 (ENSDLEG00000014804)	HTATIP2 (ENSDLEG00000014829)	DBX1 (ENSDLEG00000014842)	NAV2 (ENSDLEG00000014897)	ENSDLEG00000015354	E2F8 (ENSDLEG00000015370)	CSRP3 (ENSDLEG00000015409)	ZDHHC13 (ENSDLEG00000015429)	PTPN5 (ENSDLEG00000015461) #16	TMEM86A (ENSDLEG00000015500) #17	ENSDLEG00000015507	MISFA (ENSDLEG00000015517)	UEVLD (ENSDLEG00000015524) #21	ENSDLEG00000015553	TSG101 (ENSDLEG00000015564) #22	ENSDLEG00000015577 #23	ENSDLEG00000015586 #24	GTF2H1 (ENSDLEG00000015605) #25	HPS5 (ENSDLEG00000015626) #27	ENSDLEG00000015657	SAAL1 (ENSDLEG00000015675)	TPH1 (ENSDLEG00000015701)	SERGEF (ENSDLEG00000015727)	KCNC1 (ENSDLEG00000015743)	MYOD1 (ENSDLEG00000015755)	OTOG (ENSDLEG00000015797)	USH1C (ENSDLEG00000016116)	ABCC8 (ENSDLEG00000016659)	KCNJ11 (ENSDLEG00000020835)	ENSDLEG00000020840
Narwhal	MODERN SPECIES	314	PRMT3 (ENSMMNG00015016799)	HTATIP2 (ENSMMNG00015016730)	DBX1 (ENSMMNG00015016689)	ENSMMNG00015016644	NAV2 (ENSMMNG00015016103)	E2F8 (ENSMMNG00015015849)	CSRP3 (ENSMMNG00015015807)	ZDHHC13 (ENSMMNG00015021814)	PTPN5 (ENSMMNG00015021793) #16	IGSF22 (ENSMMNG00015021782)	TMEM86A (ENSMMNG00015021775) #17	SPTY2D1 (ENSMMNG00015021771) #18	MISFA (ENSMMNG00015021767)	ENSMMNG00015021762	UEVLD (ENSMMNG00015021744) #21	TSG101 (ENSMMNG00015021720) #22	ENSMMNG00015021710 #23	ENSMMNG00015021702 #24	ENSMMNG00015021700	ENSMMNG00015021692	GTF2H1 (ENSMMNG00015021680) #25	HPS5 (ENSMMNG00015021667) #27	ENSMMNG00015021655	ENSMMNG00015021651	ENSMMNG00015021647	SAAL1 (ENSMMNG00015021635)	TPH1 (ENSMMNG00015021621)	SERGEF (ENSMMNG00015021595)	KCNC1 (ENSMMNG00015021571)	MYOD1 (ENSMMNG00015021563)	OTOG (ENSMMNG00015021531)
Dolphin	MODERN SPECIES	3409											PTPN5 (ENSTTRG00000013763) #16	IGSF22 (ENSTTRG00000013762)	TMEM86A (ENSTTRG00000013761) #17	ENSTTRG00000013760	UEVLD (ENSTTRG00000013759) #21	TSG101 (ENSTTRG00000013758) #22	LDHAL6A (ENSTTRG00000013757)	LDHA (ENSTTRG00000013756) #24	GTF2H1 (ENSTTRG00000013755) #25	HPS5 (ENSTTRG00000013754) #27
Sperm whale	MODERN SPECIES	7	PRMT3 (ENSPCTG00005008136)	HTATIP2 (ENSPCTG00005008097)	DBX1 (ENSPCTG00005008072)	ENSPCTG00005008063	E2F8 (ENSPCTG00005008024)	CSRP3 (ENSPCTG00005007959)	ZDHHC13 (ENSPCTG00005007891)	ENSPCTG00005007781 ##15	ENSPCTG00005007749	PTPN5 (ENSPCTG00005007677) #16	IGSF22 (ENSPCTG00005007611)	TMEM86A (ENSPCTG00005007580) #17	SPTY2D1 (ENSPCTG00005007559) #18	MISFA (ENSPCTG00005007534)	UEVLD (ENSPCTG00005007495) #21	TSG101 (ENSPCTG00005007406) #22	ENSPCTG00005007383	LDHC (ENSPCTG00005007321) #23	LDHA (ENSPCTG00005007271) #24	ENSPCTG00005007257	GTF2H1 (ENSPCTG00005007039) #25	HPS5 (ENSPCTG00005006903) #27	ENSPCTG00005006852	ENSPCTG00005006824	ENSPCTG00005006800	SAAL1 (ENSPCTG00005006752)	TPH1 (ENSPCTG00005006667)	SERGEF (ENSPCTG00005006546)	KCNC1 (ENSPCTG00005006503)	MYOD1 (ENSPCTG00005006484)	OTOG (ENSPCTG00005006334)
Blue whale	MODERN SPECIES	19	PRMT3 (ENSBMSG00010010920)	HTATIP2 (ENSBMSG00010010875)	DBX1 (ENSBMSG00010010849)	ENSBMSG00010010837	NAV2 (ENSBMSG00010010470)	E2F8 (ENSBMSG00010010293)	CSRP3 (ENSBMSG00010010253)	ZDHHC13 (ENSBMSG00010010191)	ENSBMSG00010010155	PTPN5 (ENSBMSG00010010102) #16	IGSF22 (ENSBMSG00010010054)	TMEM86A (ENSBMSG00010010029) #17	ENSBMSG00010010018	MISFA (ENSBMSG00010010000)	UEVLD (ENSBMSG00010009936) #21	ENSBMSG00010009877 #22	ENSBMSG00010009854	LDHC (ENSBMSG00010009652) #23	ENSBMSG00010009579 #24	GTF2H1 (ENSBMSG00010009536) #25	HPS5 (ENSBMSG00010009507) #27	ENSBMSG00010009483	ENSBMSG00010009474	ENSBMSG00010009467	SAAL1 (ENSBMSG00010012874)	TPH1 (ENSBMSG00010012841)	ENSBMSG00010012824	SERGEF (ENSBMSG00010012809)	KCNC1 (ENSBMSG00010012786)	MYOD1 (ENSBMSG00010012778)	OTOG (ENSBMSG00010012712)
Cetacea	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.m.b #22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.m.b #22
Sperm whale	MODERN SPECIES	16	GRB10 (ENSPCTG00005001292)	ENSPCTG00005001225	ENSPCTG00005001218	VSTM2A (ENSPCTG00005001196)	SEC61G (ENSPCTG00005001175)	EGFR (ENSPCTG00005001100)	LANCL2 (ENSPCTG00005001055)	VOPP1 (ENSPCTG00005000911)	PGAM2 (ENSPCTG00005000870)	DBNL (ENSPCTG00005000789)	UBE2D4 (ENSPCTG00005000753)	ENSPCTG00005000738	IGFBP3 (ENSPCTG00005000698)	IGFBP1 (ENSPCTG00005000667)	ADCY1 (ENSPCTG00005000587)	ENSPCTG00005000553 #22	RAMP3 (ENSPCTG00005000535)	ENSPCTG00005000520	TBRG4 (ENSPCTG00005000487)	ENSPCTG00005000414	CCM2 (ENSPCTG00005000360)	ENSPCTG00005000278	ENSPCTG00005000252	PURB (ENSPCTG00005000229)	H2AZ2 (ENSPCTG00005006851)	ENSPCTG00005006814	ENSPCTG00005006010	ENSPCTG00005005920	CAMK2B (ENSPCTG00005005842)	YKT6 (ENSPCTG00005005767)	GCK (ENSPCTG00005005671)
Blue whale	MODERN SPECIES	20	ENSBMSG00010015380	VSTM2A (ENSBMSG00010015308)	ENSBMSG00010015274	EGFR (ENSBMSG00010015093)	ENSBMSG00010015050	VOPP1 (ENSBMSG00010014847)	PGAM2 (ENSBMSG00010014799)	DBNL (ENSBMSG00010014621)	ENSBMSG00010014534	URGCP (ENSBMSG00010014423)	ENSBMSG00010014382	TNS3 (ENSBMSG00010014209)	IGFBP3 (ENSBMSG00010014079)	IGFBP1 (ENSBMSG00010013990)	ADCY1 (ENSBMSG00010013864)	ENSBMSG00010011864 #22	ENSBMSG00010011856	RAMP3 (ENSBMSG00010011842)	ENSBMSG00010011823	TBRG4 (ENSBMSG00010011787)	ENSBMSG00010011679	CCM2 (ENSBMSG00010011613)	MYO1G (ENSBMSG00010011571)	PURB (ENSBMSG00010011548)	H2AZ2 (ENSBMSG00010011437)	ENSBMSG00010011406	ZMIZ2 (ENSBMSG00010011312)	OGDH (ENSBMSG00010011176)	TMED4 (ENSBMSG00010011091)	DDX56 (ENSBMSG00010011061)	NPC1L1 (ENSBMSG00010010957)
Cetacea	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.n #22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.n #22
Odontoceti_a	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.n #22
Odontoceti_b	ANCESTRAL SPECIES																	ENSGT00940000153903.a.a.n #22
Vaquita	MODERN SPECIES	19	HTATIP2 (ENSPSNG00000014906)	DBX1 (ENSPSNG00000014795)	ENSPSNG00000014727	ENSPSNG00000014664	NAV2 (ENSPSNG00000012172)	E2F8 (ENSPSNG00000011946)	CSRP3 (ENSPSNG00000011781)	ZDHHC13 (ENSPSNG00000011708)	PTPN5 (ENSPSNG00000011269) #16	IGSF22 (ENSPSNG00000011018)	TMEM86A (ENSPSNG00000010973) #17	SPTY2D1 (ENSPSNG00000010952) #18	MISFA (ENSPSNG00000010875)	ENSPSNG00000010762	UEVLD (ENSPSNG00000010589) #21	TSG101 (ENSPSNG00000010472) #22	ENSPSNG00000010416 #23	ENSPSNG00000010383 #24	ENSPSNG00000010281	GTF2H1 (ENSPSNG00000010188) #25	HPS5 (ENSPSNG00000009992) #27	ENSPSNG00000009837	ENSPSNG00000009755	ENSPSNG00000009709	ENSPSNG00000009625	ENSPSNG00000009564	SAAL1 (ENSPSNG00000009495)	TPH1 (ENSPSNG00000009426)	SERGEF (ENSPSNG00000009362)	KCNC1 (ENSPSNG00000009240)	MYOD1 (ENSPSNG00000009194)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT01030000235549	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Carnivora	ANCESTRAL SPECIES	7	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.m.b #24	ENSGT00940000153201.j.n #24	ENSGT01030000235549	ENSGT00940000153201.j.m.a #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Felidae	ANCESTRAL SPECIES		ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.m.b #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684.g	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b
Panthera	ANCESTRAL SPECIES	13	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.m.b #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b.l	ENSGT00390000004737.b.a.o.a.a.a.a.g	ENSGT00390000004737.b.a.o.a.a.a.a.h	ENSGT00390000004737.b.a.o.a.a.a.b.k	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684.g	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
Panthera_a	ANCESTRAL SPECIES	20	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.m.b #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b.l	ENSGT00390000004737.b.a.o.a.a.a.a.g	ENSGT00390000004737.b.a.o.a.a.a.a.h	ENSGT00390000004737.b.a.o.a.a.a.b.k	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684.g	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A
lion	MODERN SPECIES	10	DBX1 (ENSPLOG00000019812)	ENSPLOG00000019783	ENSPLOG00000019733	NAV2 (ENSPLOG00000017874)	E2F8 (ENSPLOG00000017576)	CSRP3 (ENSPLOG00000017516)	ZDHHC13 (ENSPLOG00000017457)	ENSPLOG00000017425 ##15	PTPN5 (ENSPLOG00000017060) #16	IGSF22 (ENSPLOG00000016855)	TMEM86A (ENSPLOG00000016800) #17	SPTY2D1 (ENSPLOG00000016758) #18	ENSPLOG00000016726	MISFA (ENSPLOG00000016698)	UEVLD (ENSPLOG00000016574) #21	TSG101 (ENSPLOG00000016477) #22	LDHC (ENSPLOG00000016357) #23	ENSPLOG00000016282 #24	GTF2H1 (ENSPLOG00000016181) #25	HPS5 (ENSPLOG00000016112) #27	ENSPLOG00000016063	ENSPLOG00000016007	SAAL1 (ENSPLOG00000015945)	TPH1 (ENSPLOG00000015838)	SERGEF (ENSPLOG00000015624)	KCNC1 (ENSPLOG00000015532)	MYOD1 (ENSPLOG00000015478)	OTOG (ENSPLOG00000014950)	USH1C (ENSPLOG00000014009)	ABCC8 (ENSPLOG00000011679)	KCNJ11 (ENSPLOG00000011463)
leopard	MODERN SPECIES	29	NELL1 (ENSPPRG00000000327)	SLC6A5 (ENSPPRG00000000873)	PRMT3 (ENSPPRG00000001326)	HTATIP2 (ENSPPRG00000002560)	DBX1 (ENSPPRG00000002780)	NAV2 (ENSPPRG00000013270)	E2F8 (ENSPPRG00000014115)	ENSPPRG00000015668	ZDHHC13 (ENSPPRG00000020544)	PTPN5 (ENSPPRG00000000183) #16	IGSF22 (ENSPPRG00000000851)	TMEM86A (ENSPPRG00000001090) #17	SPTY2D1 (ENSPPRG00000001541) #18	ENSPPRG00000001886	UEVLD (ENSPPRG00000003736) #21	TSG101 (ENSPPRG00000004620) #22	ENSPPRG00000006170	ENSPPRG00000008586	LDHC (ENSPPRG00000010475) #23	ENSPPRG00000014382 #24	GTF2H1 (ENSPPRG00000020251) #25	HPS5 (ENSPPRG00000022226) #27	ENSPPRG00000024363	ENSPPRG00000024065	ENSPPRG00000023577	ENSPPRG00000000993	SAAL1 (ENSPPRG00000001488)	TPH1 (ENSPPRG00000001846)	SERGEF (ENSPPRG00000003386)	KCNC1 (ENSPPRG00000003611)	MYOD1 (ENSPPRG00000003796)
Tiger	MODERN SPECIES	586	SLC6A5 (ENSPTIG00000019076)	PRMT3 (ENSPTIG00000016281)	HTATIP2 (ENSPTIG00000013551)	DBX1 (ENSPTIG00000012810)	NAV2 (ENSPTIG00000012689)	E2F8 (ENSPTIG00000011789)	CSRP3 (ENSPTIG00000011374)	ZDHHC13 (ENSPTIG00000007499)	ENSPTIG00000007006 ##15	PTPN5 (ENSPTIG00000020942) #16	IGSF22 (ENSPTIG00000020496)	TMEM86A (ENSPTIG00000020012) #17	SPTY2D1 (ENSPTIG00000019614) #18	ENSPTIG00000019097	UEVLD (ENSPTIG00000013958) #21	TSG101 (ENSPTIG00000011586) #22	ENSPTIG00000011335	LDHC (ENSPTIG00000007918) #23	LDHA (ENSPTIG00000016734) #24	GTF2H1 (ENSPTIG00000015340) #25	HPS5 (ENSPTIG00000010507) #27	ENSPTIG00000010049	ENSPTIG00000008520	ENSPTIG00000005766	ENSPTIG00000005385	SAAL1 (ENSPTIG00000020213)	TPH1 (ENSPTIG00000019857)	SERGEF (ENSPTIG00000016255)	KCNC1 (ENSPTIG00000014448)	ENSPTIG00000013033
Cat	MODERN SPECIES	241	HTATIP2 (ENSFCAG00000030053)	DBX1 (ENSFCAG00000028654)	NAV2 (ENSFCAG00000001793)	ENSFCAG00000022292	E2F8 (ENSFCAG00000010706)	CSRP3 (ENSFCAG00000010704)	ZDHHC13 (ENSFCAG00000010703)	ENSFCAG00000010700 ##15	PTPN5 (ENSFCAG00000002890) #16	IGSF22 (ENSFCAG00000043784)	TMEM86A (ENSFCAG00000015745) #17	SPTY2D1 (ENSFCAG00000015743) #18	ENSFCAG00000048198	MISFA (ENSFCAG00000035445)	UEVLD (ENSFCAG00000015742) #21	TSG101 (ENSFCAG00000028742) #22	LDHC (ENSFCAG00000034264) #23	LDHA (ENSFCAG00000015735) #24	GTF2H1 (ENSFCAG00000007117) #25	HPS5 (ENSFCAG00000011158) #27	ENSFCAG00000042268	ENSFCAG00000046392	SAAL1 (ENSFCAG00000000210)	TPH1 (ENSFCAG00000025053)	SERGEF (ENSFCAG00000000209)	KCNC1 (ENSFCAG00000004974)	MYOD1 (ENSFCAG00000004973)	OTOG (ENSFCAG00000004972)	USH1C (ENSFCAG00000004971)	ABCC8 (ENSFCAG00000004967)	KCNJ11 (ENSFCAG00000007305)
Caniformia	ANCESTRAL SPECIES	25	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.n #24	ENSGT01030000235549	ENSGT00940000153201.j.m.a #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.m.a #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b
Mustelinae	ANCESTRAL SPECIES	30	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479.e #23	ENSGT00940000153201.j.n #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b
American mink	DUPLICATION
American mink	MODERN SPECIES	13	HTATIP2 (ENSNVIG00000017546)	DBX1 (ENSNVIG00000017634)	NAV2 (ENSNVIG00000017681)	ENSNVIG00000018341	E2F8 (ENSNVIG00000018359)	CSRP3 (ENSNVIG00000018395)	ZDHHC13 (ENSNVIG00000018438)	ENSNVIG00000018465 ##15	PTPN5 (ENSNVIG00000018475) #16	IGSF22 (ENSNVIG00000018521)	TM86A (ENSNVIG00000018560) #17	SPTY2D1 (ENSNVIG00000018574) #18	ENSNVIG00000018581	MISFA (ENSNVIG00000018586)	UEVLD (ENSNVIG00000018596) #21	ENSNVIG00000018751 #22	LDHC (ENSNVIG00000018779) #23	ENSNVIG00000018827	TF2H1 (ENSNVIG00000018843) #25	HPS5 (ENSNVIG00000018867) #27	ENSNVIG00000018923	ENSNVIG00000018941	ENSNVIG00000018957	SAAL1 (ENSNVIG00000018995)	TPH1 (ENSNVIG00000019049)	SERGEF (ENSNVIG00000019122)	KCNC1 (ENSNVIG00000019159)	MYOD1 (ENSNVIG00000019177)	OTOG (ENSNVIG00000019193)	USH1C (ENSNVIG00000019256)	ABCC8 (ENSNVIG00000019489)
American mink	MODERN SPECIES	308									ENSNVIG00000006838	GPR137B (ENSNVIG00000006852)	NID1 (ENSNVIG00000006876)	LYST (ENSNVIG00000006945)	GNG4 (ENSNVIG00000007063)	B3GALNT2 (ENSNVIG00000007076)	TBCE (ENSNVIG00000007098)	ENSNVIG00000007226 #22	GGPS1 (ENSNVIG00000007231)	ARID4B (ENSNVIG00000007256)	RBM34 (ENSNVIG00000007398)	TOM20 (ENSNVIG00000007428)	IRF2BP2 (ENSNVIG00000007464)	TARBP1 (ENSNVIG00000007492)	ENSNVIG00000007537	SLC35F3 (ENSNVIG00000007554)
Ferret	MODERN SPECIES	194	SLC6A5 (ENSMPUG00000013929)	PRMT3 (ENSMPUG00000013923)	HTATIP2 (ENSMPUG00000013921)	ENSMPUG00000013918	DBX1 (ENSMPUG00000013914)	NAV2 (ENSMPUG00000013905)	E2F8 (ENSMPUG00000013899)	CSRP3 (ENSMPUG00000013898)	ZDHHC13 (ENSMPUG00000013842)	ENSMPUG00000019449 ##15	PTPN5 (ENSMPUG00000013839) #16	IGSF22 (ENSMPUG00000013835)	TMEM86A (ENSMPUG00000013825) #17	SPTY2D1 (ENSMPUG00000013816) #18	UEVLD (ENSMPUG00000013774) #21	TSG101 (ENSMPUG00000013769) #22	ENSMPUG00000013766 #23	ENSMPUG00000013730 #24	GTF2H1 (ENSMPUG00000013729) #25	HPS5 (ENSMPUG00000013726) #27	ENSMPUG00000013724	ENSMPUG00000013721	SAAL1 (ENSMPUG00000013717)	TPH1 (ENSMPUG00000013571)	SERGEF (ENSMPUG00000013567)	KCNC1 (ENSMPUG00000013565)	MYOD1 (ENSMPUG00000013563)	OTOG (ENSMPUG00000013475)	USH1C (ENSMPUG00000013383)	ABCC8 (ENSMPUG00000013368)	KCNJ11 (ENSMPUG00000019000)
Ursidae	ANCESTRAL SPECIES	2	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00910000147178	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.m.a #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b
Ursus	ANCESTRAL SPECIES	69	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00960000187178	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.m.a #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a
Polar bear	MODERN SPECIES	141	SLC6A5 (ENSUMAG00000019945)	PRMT3 (ENSUMAG00000020026)	HTATIP2 (ENSUMAG00000020143)	DBX1 (ENSUMAG00000020160)	NAV2 (ENSUMAG00000020189)	ENSUMAG00000020361	E2F8 (ENSUMAG00000020364)	CSRP3 (ENSUMAG00000020368)	ZDHHC13 (ENSUMAG00000020381)	ENSUMAG00000020470 ##15	PTPN5 (ENSUMAG00000020473) #16	TMEM86A (ENSUMAG00000020480) #17	SPTY2D1 (ENSUMAG00000020482) #18	MISFA (ENSUMAG00000020486)	UEVLD (ENSUMAG00000020491) #21	TSG101 (ENSUMAG00000020496) #22	ENSUMAG00000020503 #23	ENSUMAG00000020508 #23	LDHA (ENSUMAG00000020515) #24	GTF2H1 (ENSUMAG00000020519) #25	ENSUMAG00000020540 #27	ENSUMAG00000020566 #27	ENSUMAG00000020602	ENSUMAG00000020619
American black bear	MODERN SPECIES	1429												SPTY2D1 (ENSUAMG00000019113) #18	MISFA (ENSUAMG00000019114)	ENSUAMG00000019115 #21	ENSUAMG00000019116	TSG101 (ENSUAMG00000019117) #22	ENSUAMG00000019118 #23	ENSUAMG00000019119 #23	LDHA (ENSUAMG00000019120) #24	GTF2H1 (ENSUAMG00000019123) #25	HPS5 (ENSUAMG00000019163) #27
Giant Panda	MODERN SPECIES	7	HTATIP2 (ENSAMEG00000004668)	DBX1 (ENSAMEG00000004660)	ENSAMEG00000029262	NAV2 (ENSAMEG00000004597)	E2F8 (ENSAMEG00000017950)	CSRP3 (ENSAMEG00000017946)	ZDHHC13 (ENSAMEG00000017928)	ENSAMEG00000019312 ##15	PTPN5 (ENSAMEG00000017915) #16	IGSF22 (ENSAMEG00000017913)	TMEM86A (ENSAMEG00000017911) #17	SPTY2D1 (ENSAMEG00000017906) #18	ENSAMEG00000028723	MISFA (ENSAMEG00000017904)	UEVLD (ENSAMEG00000017885) #21	TSG101 (ENSAMEG00000017874) #22	LDHC (ENSAMEG00000017872) #23	ENSAMEG00000017854 #24	GTF2H1 (ENSAMEG00000017836) #25	HPS5 (ENSAMEG00000017819) #27	ENSAMEG00000023602	ENSAMEG00000024218	SAAL1 (ENSAMEG00000018204)	TPH1 (ENSAMEG00000018200)	SERGEF (ENSAMEG00000028965)	KCNC1 (ENSAMEG00000018198)	MYOD1 (ENSAMEG00000018197)	OTOG (ENSAMEG00000003146)	USH1C (ENSAMEG00000003181)	ABCC8 (ENSAMEG00000003026)	KCNJ11 (ENSAMEG00000019510)
Canidae	ANCESTRAL SPECIES	1	ENSGT00410000029064	ENSGT00390000011749	ENSGT00940000159617	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01100000263734	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.n.j #24	ENSGT01030000235549	ENSGT00940000153201.j.m.a.f #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490
Red fox	MODERN SPECIES	266				ENSVVUG00000001719	ENSVVUG00000001736	E2F8 (ENSVVUG00000001762)	CSRP3 (ENSVVUG00000001781)	ZDHHC13 (ENSVVUG00000001822)	ENSVVUG00000002374 ##15	PTPN5 (ENSVVUG00000002423) #16	IGSF22 (ENSVVUG00000002474)	TMEM86A (ENSVVUG00000002500) #17	SPTY2D1 (ENSVVUG00000002505) #18	ENSVVUG00000002512	UEVLD (ENSVVUG00000002533) #21	TSG101 (ENSVVUG00000002567) #22	ENSVVUG00000002657	LDHC (ENSVVUG00000002685) #23	ENSVVUG00000002716	ENSVVUG00000002728 #24	GTF2H1 (ENSVVUG00000002738) #25	HPS5 (ENSVVUG00000002771) #27	ENSVVUG00000004133
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00950000183093.B	ENSGT00910000147241	ENSGT00940000155663	ENSGT00390000015930.ab	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000247925	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j.n.j #24	ENSGT01030000235549	ENSGT00940000153201.j.m.a.f #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b.n.a	ENSGT00390000004737.b.a.o.a.a.a.a.c	ENSGT00390000004737.b.a.o.a.a.a.b.m	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490
Dingo	DUPLICATION
Dingo	MODERN SPECIES	231	SLC6A5 (ENSCAFG00020019350)	PRMT3 (ENSCAFG00020019297)	HTATIP2 (ENSCAFG00020019284)	DBX1 (ENSCAFG00020019280)	NAV2 (ENSCAFG00020019081)	ENSCAFG00020019024	E2F8 (ENSCAFG00020019000)	CSRP3 (ENSCAFG00020018980)	ZDHHC13 (ENSCAFG00020018891)	ENSCAFG00020018860 ##15	PTPN5 (ENSCAFG00020018854) #16	TMEM86A (ENSCAFG00020018853) #17	SPTY2D1 (ENSCAFG00020018850) #18	MISFA (ENSCAFG00020018848)	UEVLD (ENSCAFG00020018838) #21	ENSCAFG00020018792 #22	ENSCAFG00020018780	LDHC (ENSCAFG00020018722) #23	ENSCAFG00020018694 #24	GTF2H1 (ENSCAFG00020018689) #25	HPS5 (ENSCAFG00020018444) #27	ENSCAFG00020018420	ENSCAFG00020018417	ENSCAFG00020018412	ENSCAFG00020018410	ENSCAFG00020018409	SAAL1 (ENSCAFG00020018406)	TPH1 (ENSCAFG00020018391)	SERGEF (ENSCAFG00020018379)	KCNC1 (ENSCAFG00020018373)	MYOD1 (ENSCAFG00020018371)
Dingo	MODERN SPECIES	398	ENSCAFG00020004700	HSPD1 (ENSCAFG00020004710)	ENSCAFG00020004741	COQ10B (ENSCAFG00020004745)	SF3B1 (ENSCAFG00020004750)	ANKRD44 (ENSCAFG00020004766)	PGAP1 (ENSCAFG00020004924)	GTF3C3 (ENSCAFG00020004945)	CCDC150 (ENSCAFG00020004958)	ENSCAFG00020004995	ENSCAFG00020005006	ENSCAFG00020005013	STK17B (ENSCAFG00020005103)	DNAH7 (ENSCAFG00020005129)	SLC39A10 (ENSCAFG00020005340)	ENSCAFG00020005359 #22	TMEFF2 (ENSCAFG00020005361)	CAVIN2 (ENSCAFG00020005369)	NABP1 (ENSCAFG00020005380)	MYO1B (ENSCAFG00020005407)	ENSCAFG00020005473	ENSCAFG00020005479	STAT1 (ENSCAFG00020005482)	GLS (ENSCAFG00020005567)	NAB1 (ENSCAFG00020006552)	NEMP2 (ENSCAFG00020006586)	MFSD6 (ENSCAFG00020006595)	INPP1 (ENSCAFG00020006605)	HIBCH (ENSCAFG00020006616)	C2orf88 (ENSCAFG00020006638)	MSTN (ENSCAFG00020006640)
Dog	DUPLICATION
Dog	MODERN SPECIES	13	DBX1 (ENSCAFG00845021224)	ENSCAFG00845021177	ENSCAFG00845021130	NAV2 (ENSCAFG00845019323)	E2F8 (ENSCAFG00845018868)	CSRP3 (ENSCAFG00845018814)	ZDHHC13 (ENSCAFG00845018721)	MRGPRX (ENSCAFG00845018660) ##15	IGSF22 (ENSCAFG00845018417)	TMEM86A (ENSCAFG00845018325) #17	SPTY2D1 (ENSCAFG00845018254) #18	ENSCAFG00845018219	MISFA (ENSCAFG00845018190)	ENSCAFG00845017589 #16	UEVLD (ENSCAFG00845017016) #21	TSG101 (ENSCAFG00845016679) #22	LDHC (ENSCAFG00845016401) #23	ENSCAFG00845016146 #24	ENSCAFG00845016105	GTF2H1 (ENSCAFG00845016048) #25	HPS5 (ENSCAFG00845015814) #27	ENSCAFG00845015612	SAA1 (ENSCAFG00845015494)	ENSCAFG00845015397	SAAL1 (ENSCAFG00845015248)	TPH1 (ENSCAFG00845015143)	SERGEF (ENSCAFG00845015032)	KCNC1 (ENSCAFG00845014972)	MYOD1 (ENSCAFG00845014938)	OTOG (ENSCAFG00845014610)	USH1C (ENSCAFG00845014411)
Dog	MODERN SPECIES	30	HSPE1 (ENSCAFG00845027216)	HSPD1 (ENSCAFG00845027075)	SF3B1 (ENSCAFG00845026632)	COQ10B (ENSCAFG00845026337)	ENSCAFG00845026214	ANKRD44 (ENSCAFG00845025354)	PGAP1 (ENSCAFG00845024751)	C2orf66 (ENSCAFG00845024629)	GTF3C3 (ENSCAFG00845024524)	CCDC150 (ENSCAFG00845023218)	ENSCAFG00845022790	HECW2 (ENSCAFG00845022474)	STK17B (ENSCAFG00845022333)	DNAH7 (ENSCAFG00845021093)	SLC39A10 (ENSCAFG00845020786)	ENSCAFG00845020706 #22	TMEFF2 (ENSCAFG00845020476)	CAVIN2 (ENSCAFG00845020388)	NABP1 (ENSCAFG00845020299)	MYO1B (ENSCAFG00845019502)	STAT4 (ENSCAFG00845026634)	STAT1 (ENSCAFG00845025854)	GLS (ENSCAFG00845025512)	ENSCAFG00845025429	NAB1 (ENSCAFG00845025364)	NEMP2 (ENSCAFG00845025264)	MFSD6 (ENSCAFG00845025050)	INPP1 (ENSCAFG00845024963)	HIBCH (ENSCAFG00845024697)	MSTN (ENSCAFG00845024446)	ORMDL1 (ENSCAFG00845024320)
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.b	ENSGT00390000004737.b.a.o.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00950000182989.D.a.a.g.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000164064	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Microchiroptera	ANCESTRAL SPECIES	31	ENSGT00950000182989.D.a.a.g.b	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b ##15	ENSGT00940000159916 #16	ENSGT00940000160123	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000163242.a	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.a.a.a	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b	ENSGT00940000157490	ENSGT00950000183002.A	ENSGT00940000156626
Microbat	MODERN SPECIES	1061	ENSMLUG00000016135	ENSMLUG00000023303 ##15	ENSMLUG00000006167 ##15	ENSMLUG00000024710 ##15	ENSMLUG00000022292 ##15	ENSMLUG00000027629 ##15	ENSMLUG00000011979	ENSMLUG00000024671 ##15	ENSMLUG00000028143 ##15	ENSMLUG00000024241 ##15	PTPN5 (ENSMLUG00000016411) #16	IGSF22 (ENSMLUG00000016399)	TMEM86A (ENSMLUG00000016391) #17	ENSMLUG00000027941 #18	UEVLD (ENSMLUG00000016358) #21	TSG101 (ENSMLUG00000016353) #22	LDHC (ENSMLUG00000016348) #23	ENSMLUG00000016343 #24	GTF2H1 (ENSMLUG00000016329) #25	HPS5 (ENSMLUG00000016318) #27	ENSMLUG00000008051	ENSMLUG00000016314	ENSMLUG00000028709	SAAL1 (ENSMLUG00000008022)	TPH1 (ENSMLUG00000008011)	ENSMLUG00000007974	KCNC1 (ENSMLUG00000007950)	MYOD1 (ENSMLUG00000007940)	ENSMLUG00000029772	OTOG (ENSMLUG00000002545)	USH1C (ENSMLUG00000002529)
Greater horseshoe bat	MODERN SPECIES	2	DBX1 (ENSRFEG00010015442)	NAV2 (ENSRFEG00010015693)	ENSRFEG00010018702	E2F8 (ENSRFEG00010018740)	CSRP3 (ENSRFEG00010018867)	ZDHHC13 (ENSRFEG00010018909)	ENSRFEG00010018972 ##15	ENSRFEG00010019036 ##15	ENSRFEG00010019099 ##15	ENSRFEG00010019112 ##15	PTPN5 (ENSRFEG00010019203) #16	IGSF22 (ENSRFEG00010019473)	TMEM86A (ENSRFEG00010019663) #17	SPTY2D1 (ENSRFEG00010019685) #18	ENSRFEG00010019723	ENSRFEG00010019776 #22	ENSRFEG00010019955	LDHC (ENSRFEG00010020017) #23	ENSRFEG00010020271 #24	GTF2H1 (ENSRFEG00010020416) #25	HPS5 (ENSRFEG00010020475) #27	ENSRFEG00010020515	ENSRFEG00010020556	ENSRFEG00010020584	ENSRFEG00010020599	SAAL1 (ENSRFEG00010020641)	TPH1 (ENSRFEG00010020684)	SERGEF (ENSRFEG00010020728)	ENSRFEG00010020796	KCNC1 (ENSRFEG00010020809)	MYOD1 (ENSRFEG00010020830)
Megabat	MODERN SPECIES	1666														SPTY2D1 (ENSPVAG00000007215) #18	UEVLD (ENSPVAG00000007211) #21	TSG101 (ENSPVAG00000007210) #22	LDHAL6A (ENSPVAG00000007209)	LDHC (ENSPVAG00000007207) #23	LDHA (ENSPVAG00000007206) #24	GTF2H1 (ENSPVAG00000007205) #25	HPS5 (ENSPVAG00000007202) #27
Equus	ANCESTRAL SPECIES	40	ENSGT00810000125439.A	ENSGT00940000154963	ENSGT00940000156825	ENSGT00390000008184	ENSGT00950000183093.B	ENSGT00940000155663	ENSGT00940000158651	ENSGT00940000159533	ENSGT00530000063074.b.a	ENSGT01030000234639.A.b.a.b.a.b.b.e.a.a ##15	ENSGT00940000159916 #16	ENSGT00390000007101.d.b #17	ENSGT00940000154133.A #18	ENSGT01050000245084	ENSGT00940000153903.a.b.b #21	ENSGT00940000153903.a.a #22	ENSGT00940000161479 #23	ENSGT00940000153201.j #24	ENSGT00390000015066 #25	ENSGT00940000155818 #27	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.a.o.a.b.f.a.b	ENSGT00390000004737.b.a.o.a.a.b.fb.a	ENSGT00390000004737.b.a.o.a.a.b.eb.b	ENSGT01030000234639.A.b.a.b.a.b.b.e.b.a ##15	ENSGT00390000004737.b.a.o.a.b.e	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684	ENSGT00940000156912	ENSGT00950000182959.b.b
Donkey	MODERN SPECIES	12	SLC6A5 (ENSEASG00005013072)	PRMT3 (ENSEASG00005013043)	HTATIP2 (ENSEASG00005036432)	DBX1 (ENSEASG00005013038)	ENSEASG00005035973	NAV2 (ENSEASG00005013028)	E2F8 (ENSEASG00005013023)	CSRP3 (ENSEASG00005035822)	ZDHHC13 (ENSEASG00005013019)	ENSEASG00005013011 ##15	PTPN5 (ENSEASG00005012958) #16	TMEM86A (ENSEASG00005030607) #17	SPTY2D1 (ENSEASG00005012954) #18	MISFA (ENSEASG00005032488)	UEVLD (ENSEASG00005012948) #21	TSG101 (ENSEASG00005012943) #22	LDHC (ENSEASG00005012917) #23	LDHA (ENSEASG00005012914) #24	GTF2H1 (ENSEASG00005012908) #25	HPS5 (ENSEASG00005012900) #27	ENSEASG00005026588	ENSEASG00005035302	ENSEASG00005035911	ENSEASG00005037086	ENSEASG00005012966 ##15	ENSEASG00005031856	ENSEASG00005034187	ENSEASG00005030092	ENSEASG00005023828	ENSEASG00005007576	ENSEASG00005007574
Horse	MODERN SPECIES	28	SLC6A5 (ENSECAG00000022340)	PRMT3 (ENSECAG00000021124)	HTATIP2 (ENSECAG00000050787)	ENSECAG00000041222	DBX1 (ENSECAG00000019994)	NAV2 (ENSECAG00000017807)	ENSECAG00000037265	MGRG1 (ENSECAG00000003099) ##15	ENSECAG00000001949 ##15	ENSECAG00000039541 ##15	PTPN5 (ENSECAG00000011842) #16	TMEM86A (ENSECAG00000011358) #17	SPTY2D1 (ENSECAG00000011055) #18	ENSECAG00000050200	UEVLD (ENSECAG00000009898) #21	TSG101 (ENSECAG00000004362) #22	LDHC (ENSECAG00000022126) #23	LDHA (ENSECAG00000020669) #24	GTF2H1 (ENSECAG00000019056) #25	HPS5 (ENSECAG00000015720) #27	ENSECAG00000036499	ENSECAG00000048632	ENSECAG00000034393 ##15	ENSECAG00000013758	ENSECAG00000030592	ENSECAG00000032096	ENSECAG00000011404	SAAL1 (ENSECAG00000009781)	SERGEF (ENSECAG00000005626)	SERGEF (ENSECAG00000056096)	KCNC1 (ENSECAG00000002236)