Bilateria	DUPLICATION
Bilateria	ANCESTRAL SPECIES																	ENSGT00940000153766.A #22
Chordata	ANCESTRAL SPECIES																	ENSGT00940000153766.A #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000153766.A #22
Gnathostomata	ANCESTRAL SPECIES	948														ENSGT00390000002970	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22
Euteleostomi	ANCESTRAL SPECIES	86		ENSGT00950000182834.B	ENSGT00940000153634.b	ENSGT00950000182834.A.a.b.c	ENSGT00940000165101	ENSGT00390000000417.a.a.b.a.b	ENSGT00940000165801	ENSGT00940000157376	ENSGT00390000018505	ENSGT00390000002210.d	ENSGT00940000170165	ENSGT00570000079239	ENSGT00390000013448.a.a	ENSGT00390000002970	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT01030000234620.a.a.a.b	ENSGT00390000016927	ENSGT00390000001216 #33	ENSGT00940000153954 #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000165109	ENSGT00940000164764	ENSGT00950000183209.b.a.a	ENSGT00390000003866.a.a
Sarcopterygii	ANCESTRAL SPECIES	478															ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29
Tetrapoda	ANCESTRAL SPECIES	185									ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000175262	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29
Amniota	ANCESTRAL SPECIES	12	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000175262	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29
Mammalia	ANCESTRAL SPECIES	2	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a #9	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954 #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00530000064271
Theria	ANCESTRAL SPECIES	4	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a #9	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954 #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00530000064271
Eutheria	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Glires	ANCESTRAL SPECIES	5	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Muroidea	ANCESTRAL SPECIES	42	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Upper Galilee mountains blind mole rat	MODERN SPECIES	633	Nfkbie (ENSNGAG00000021559) #7	Slc35b2 (ENSNGAG00000016794) #8	Hsp90ab1 (ENSNGAG00000017929) #9	Slc29a1 (ENSNGAG00000021923) #10	Capn11 (ENSNGAG00000007388) #11	Tmem63b (ENSNGAG00000014742) #12	Mrpl14 (ENSNGAG00000016826) #13	Vegfa (ENSNGAG00000018293) #14	Mrps18a (ENSNGAG00000020052) #15	Rsph9 (ENSNGAG00000020871) #16	Mad2l1bp (ENSNGAG00000021195) #17	Gtpbp2 (ENSNGAG00000021674) #18	Polh (ENSNGAG00000022986) #19	Xpo5 (ENSNGAG00000015950) #20	Polr1c (ENSNGAG00000023487) #21	Yipf3 (ENSNGAG00000023784) #22	Lrrc73 (ENSNGAG00000023998) #23	Tjap1 (ENSNGAG00000001708) #24	Dlk2 (ENSNGAG00000010416) #25	ENSNGAG00000013794 #26	ENSNGAG00000016294 #27	ENSNGAG00000007514 #28	ENSNGAG00000013729 #29	Crip3 (ENSNGAG00000016800) #30	Slc22a7 (ENSNGAG00000021459) #31	ENSNGAG00000022106 #32	Dnph1 (ENSNGAG00000023055) #33	Cul9 (ENSNGAG00000014662) #34	Srf (ENSNGAG00000002363) #35	Ptk7 (ENSNGAG00000007758) #36	Klc4 (ENSNGAG00000013283) #37
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Cricetidae	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f.a ##34
Cricetinae	ANCESTRAL SPECIES	28	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f.a ##34
Chinese hamster chok1gshd	MODERN SPECIES	184	Mdfi (ENSCGRG00001012532)	Tfeb (ENSCGRG00001012215)	Pgc (ENSCGRG00001020240)	Frs3 (ENSCGRG00001017194)	Prickle4 (ENSCGRG00001021444)	Tomm6 (ENSCGRG00001023467)	Usp49 (ENSCGRG00001017792)	Med20 (ENSCGRG00001018311)	ENSCGRG00001022668	Rsph9 (ENSCGRG00001023633) #16	ENSCGRG00001000765 #17	Gtpbp2 (ENSCGRG00001006422) #18	Polh (ENSCGRG00001013398) #19	Xpo5 (ENSCGRG00001010034) #20	Polr1c (ENSCGRG00001017533) #21	Yipf3 (ENSCGRG00001020265) #22	Lrrc73 (ENSCGRG00001018661) #23	Tjap1 (ENSCGRG00001020623) #24	Dlk2 (ENSCGRG00001003035) #25	Abcc10 (ENSCGRG00001021477) #28	Zfp318 (ENSCGRG00001000676) #29	Crip3 (ENSCGRG00001019575) #30	Slc22a7 (ENSCGRG00001000068) #31	Ttbk1 (ENSCGRG00001012675) #32	DNPH1 (ENSCGRG00001016615) #33	Cul9 (ENSCGRG00001021627) #34	Srf (ENSCGRG00001015130) #35	Ptk7 (ENSCGRG00001019336) #36	Klc4 (ENSCGRG00001014841) #37	Mrpl2 (ENSCGRG00001022895)	Cul7 (ENSCGRG00001018296) ##34
Golden Hamster	MODERN SPECIES	649	ENSMAUG00000010907	Nfkbie (ENSMAUG00000012047) #7	Slc35b2 (ENSMAUG00000017236) #8	Hsp90ab1 (ENSMAUG00000018422) #9	Slc29a1 (ENSMAUG00000006341) #10	Capn11 (ENSMAUG00000001798) #11	Tmem63b (ENSMAUG00000007946) #12	Mrpl14 (ENSMAUG00000017756) #13	Vegfa (ENSMAUG00000007292) #14	Rsph9 (ENSMAUG00000010828) #16	Mad2l1bp (ENSMAUG00000011492) #17	Gtpbp2 (ENSMAUG00000011899) #18	Polh (ENSMAUG00000009711) #19	Xpo5 (ENSMAUG00000011670) #20	Polr1c (ENSMAUG00000014329) #21	Yipf3 (ENSMAUG00000019181) #22	Lrrc73 (ENSMAUG00000019479) #23	Tjap1 (ENSMAUG00000000201) #24	Dlk2 (ENSMAUG00000005674) #25	Abcc10 (ENSMAUG00000008720) #28	Zfp318 (ENSMAUG00000016068) #29	Crip3 (ENSMAUG00000018230) #30	Slc22a7 (ENSMAUG00000003584) #31	Ttbk1 (ENSMAUG00000008529) #32	Dnph1 (ENSMAUG00000003688) #33	Cul9 (ENSMAUG00000010584) #34	Srf (ENSMAUG00000018159) #35	Ptk7 (ENSMAUG00000000440) #36	Klc4 (ENSMAUG00000000606) #37	Mrpl2 (ENSMAUG00000008326)	Cul7 (ENSMAUG00000015878) ##34
Cricetidae_B	ANCESTRAL SPECIES	32	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f.a ##34
Prairie vole	MODERN SPECIES	352	Adgrf4 (ENSMOCG00000007247)	Opn5 (ENSMOCG00000015157)	Ptchd4 (ENSMOCG00000009170)	Mmut (ENSMOCG00000006660)	Cenpq (ENSMOCG00000020003)	Glyatl3 (ENSMOCG00000010563)	Rhag (ENSMOCG00000017965)	Crisp2 (ENSMOCG00000015071)	ENSMOCG00000007214	ENSMOCG00000006213	Mad2l1bp (ENSMOCG00000010147) #17	Gtpbp2 (ENSMOCG00000014945) #18	Polh (ENSMOCG00000014193) #19	Xpo5 (ENSMOCG00000016105) #20	Polr1c (ENSMOCG00000017549) #21	Yipf3 (ENSMOCG00000013556) #22	Lrrc73 (ENSMOCG00000013005) #23	Tjap1 (ENSMOCG00000019758) #24	Dlk2 (ENSMOCG00000010846) #25	ENSMOCG00000011089 #28	ENSMOCG00000003424 #28	ENSMOCG00000019472 #28	Zfp318 (ENSMOCG00000017163) #29	Crip3 (ENSMOCG00000016524) #30	Slc22a7 (ENSMOCG00000019817) #31	Ttbk1 (ENSMOCG00000017960) #32	Dnph1 (ENSMOCG00000016980) #33	Cul9 (ENSMOCG00000012664) #34	Srf (ENSMOCG00000018008) #35	Ptk7 (ENSMOCG00000006889) #36	Klc4 (ENSMOCG00000001647) #37
Northern American deer mouse	MODERN SPECIES	13	Slc35b2 (ENSPEMG00000010433) #8	ENSPEMG00000020801 #9	Slc29a1 (ENSPEMG00000012099) #10	Mymx (ENSPEMG00000031136)	Capn11 (ENSPEMG00000016267) #11	Tmem63b (ENSPEMG00000020790) #12	ENSPEMG00000007451 #13	Vegfa (ENSPEMG00000023496) #14	Mrps18a (ENSPEMG00000000405) #15	Rsph9 (ENSPEMG00000011206) #16	Mad2l1bp (ENSPEMG00000003113) #17	Gtpbp2 (ENSPEMG00000021976) #18	Polh (ENSPEMG00000014884) #19	Xpo5 (ENSPEMG00000020387) #20	Polr1c (ENSPEMG00000006970) #21	Yipf3 (ENSPEMG00000013680) #22	Lrrc73 (ENSPEMG00000010422) #23	Tjap1 (ENSPEMG00000000063) #24	Dlk2 (ENSPEMG00000014891) #25	Abcc10 (ENSPEMG00000008293) #28	ENSPEMG00000024236 #29	Crip3 (ENSPEMG00000015270) #30	Slc22a7 (ENSPEMG00000010267) #31	Ttbk1 (ENSPEMG00000023732) #32	Dnph1 (ENSPEMG00000017242) #33	Cul9 (ENSPEMG00000023429) #34	Srf (ENSPEMG00000024074) #35	Ptk7 (ENSPEMG00000008577) #36	Klc4 (ENSPEMG00000013017) #37	Mrpl2 (ENSPEMG00000009477)	ENSPEMG00000029429 ##34
Murinae	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Mus	ANCESTRAL SPECIES	16	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Mus_A	ANCESTRAL SPECIES	10	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Mus_B	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Mus_C	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
spretus	MODERN SPECIES	8	Hsp90ab1 (MGP_SPRETEiJ_G0022560) #9	Slc29a1 (MGP_SPRETEiJ_G0022561) #10	Mymx (MGP_SPRETEiJ_G0022562)	Capn11 (MGP_SPRETEiJ_G0022563) #11	Tmem63b (MGP_SPRETEiJ_G0022564) #12	Mrpl14 (MGP_SPRETEiJ_G0022565) #13	1600014C23Rik (MGP_SPRETEiJ_G0022566)	Vegfa (MGP_SPRETEiJ_G0022567) #14	Mrps18a (MGP_SPRETEiJ_G0022568) #15	Rsph9 (MGP_SPRETEiJ_G0022569) #16	Mad2l1bp (MGP_SPRETEiJ_G0022570) #17	Gtpbp2 (MGP_SPRETEiJ_G0022571) #18	Polh (MGP_SPRETEiJ_G0022572) #19	Xpo5 (MGP_SPRETEiJ_G0022573) #20	Polr1c (MGP_SPRETEiJ_G0022574) #21	Yipf3 (MGP_SPRETEiJ_G0022575) #22	Lrrc73 (MGP_SPRETEiJ_G0022576) #23	Tjap1 (MGP_SPRETEiJ_G0022577) #24	Dlk2 (MGP_SPRETEiJ_G0022578) #25	Abcc10 (MGP_SPRETEiJ_G0022579) #28	Zfp318 (MGP_SPRETEiJ_G0022580) #29	Crip3 (MGP_SPRETEiJ_G0022581) #30	Slc22a7 (MGP_SPRETEiJ_G0022582) #31	MGP_SPRETEiJ_G0022583	Ttbk1 (MGP_SPRETEiJ_G0022584) #32	Dnph1 (MGP_SPRETEiJ_G0022585) #33	Cul9 (MGP_SPRETEiJ_G0022586) #34	Srf (MGP_SPRETEiJ_G0022587) #35	Ptk7 (MGP_SPRETEiJ_G0022588) #36	Klc4 (MGP_SPRETEiJ_G0022589) #37	Mrpl2 (MGP_SPRETEiJ_G0022590)
Steppe mouse	MODERN SPECIES	2906							ENSMSIG00000012779	Vegfa (ENSMSIG00000012606) #14	Mrps18a (ENSMSIG00000012569) #15	Rsph9 (ENSMSIG00000012557) #16	Mad2l1bp (ENSMSIG00000012546) #17	Gtpbp2 (ENSMSIG00000012510) #18	Polh (ENSMSIG00000012488) #19	Xpo5 (ENSMSIG00000012426) #20	Polr1c (ENSMSIG00000012395) #21	Yipf3 (ENSMSIG00000012375) #22	Lrrc73 (ENSMSIG00000012347) #23	Tjap1 (ENSMSIG00000012119) #24	Dlk2 (ENSMSIG00000012088) #25	Abcc10 (ENSMSIG00000011931) #28	Zfp318 (ENSMSIG00000011902) #29	Crip3 (ENSMSIG00000011845) #30	Slc22a7 (ENSMSIG00000011832) #31	Ttbk1 (ENSMSIG00000011787) #32	ENSMSIG00000011778 #33	Cul9 (ENSMSIG00000011560) #34	Srf (ENSMSIG00000011548) #35	Ptk7 (ENSMSIG00000011532) #36	Klc4 (ENSMSIG00000011494) #37	Mrpl2 (ENSMSIG00000011453)	Cul7 (ENSMSIG00000011412) ##34
Mouse	MODERN SPECIES	8	Hsp90ab1 (ENSMUSG00000023944) #9	Slc29a1 (ENSMUSG00000023942) #10	Mymx (ENSMUSG00000079471)	Capn11 (ENSMUSG00000058626) #11	Tmem63b (ENSMUSG00000036026) #12	Mrpl14 (ENSMUSG00000023939) #13	1600014C23Rik (ENSMUSG00000094690)	Vegfa (ENSMUSG00000023951) #14	Mrps18a (ENSMUSG00000023967) #15	Rsph9 (ENSMUSG00000023966) #16	Mad2l1bp (ENSMUSG00000034509) #17	Gtpbp2 (ENSMUSG00000023952) #18	Polh (ENSMUSG00000023953) #19	Xpo5 (ENSMUSG00000067150) #20	Polr1c (ENSMUSG00000067148) #21	Yipf3 (ENSMUSG00000071074) #22	Lrrc73 (ENSMUSG00000071073) #23	Tjap1 (ENSMUSG00000012296) #24	Dlk2 (ENSMUSG00000047428) #25	Abcc10 (ENSMUSG00000032842) #28	Zfp318 (ENSMUSG00000015597) #29	Crip3 (ENSMUSG00000023968) #30	Slc22a7 (ENSMUSG00000067144) #31	Ttbk1 (ENSMUSG00000015599) #32	Dnph1 (ENSMUSG00000040658) #33	Cul9 (ENSMUSG00000040327) #34	Srf (ENSMUSG00000015605) #35	Ptk7 (ENSMUSG00000023972) #36	Klc4 (ENSMUSG00000003546) #37	Mrpl2 (ENSMUSG00000002767)	Cul7 (ENSMUSG00000038545) ##34
Ryukyu mouse	MODERN SPECIES	8	Hsp90ab1 (MGP_CAROLIEiJ_G0021648) #9	Slc29a1 (MGP_CAROLIEiJ_G0021649) #10	MGP_CAROLIEiJ_G0021650	Capn11 (MGP_CAROLIEiJ_G0021651) #11	Tmem63b (MGP_CAROLIEiJ_G0021652) #12	Mrpl14 (MGP_CAROLIEiJ_G0021653) #13	MGP_CAROLIEiJ_G0021654	MGP_CAROLIEiJ_G0021655 #14	Mrps18a (MGP_CAROLIEiJ_G0021656) #15	Rsph9 (MGP_CAROLIEiJ_G0021657) #16	Mad2l1bp (MGP_CAROLIEiJ_G0021658) #17	Gtpbp2 (MGP_CAROLIEiJ_G0021659) #18	Polh (MGP_CAROLIEiJ_G0021660) #19	Xpo5 (MGP_CAROLIEiJ_G0021661) #20	Polr1c (MGP_CAROLIEiJ_G0021662) #21	Yipf3 (MGP_CAROLIEiJ_G0021663) #22	Lrrc73 (MGP_CAROLIEiJ_G0021664) #23	Tjap1 (MGP_CAROLIEiJ_G0021665) #24	Dlk2 (MGP_CAROLIEiJ_G0021666) #25	Abcc10 (MGP_CAROLIEiJ_G0021667) #28	Zfp318 (MGP_CAROLIEiJ_G0021668) #29	Crip3 (MGP_CAROLIEiJ_G0021669) #30	Slc22a7 (MGP_CAROLIEiJ_G0021670) #31	MGP_CAROLIEiJ_G0021671	Ttbk1 (MGP_CAROLIEiJ_G0021672) #32	Dnph1 (MGP_CAROLIEiJ_G0021673) #33	Cul9 (MGP_CAROLIEiJ_G0021674) #34	Srf (MGP_CAROLIEiJ_G0021675) #35	Ptk7 (MGP_CAROLIEiJ_G0021676) #36	Klc4 (MGP_CAROLIEiJ_G0021677) #37	Mrpl2 (MGP_CAROLIEiJ_G0021678)
Shrew mouse	MODERN SPECIES	9	MGP_PahariEiJ_G0020640 ##9	Slc29a1 (MGP_PahariEiJ_G0020641) #10	MGP_PahariEiJ_G0020642	Capn11 (MGP_PahariEiJ_G0020643) #11	Tmem63b (MGP_PahariEiJ_G0020644) #12	Mrpl14 (MGP_PahariEiJ_G0020645) #13	1600014C23Rik (MGP_PahariEiJ_G0020646)	Vegfa (MGP_PahariEiJ_G0020647) #14	Mrps18a (MGP_PahariEiJ_G0020648) #15	Rsph9 (MGP_PahariEiJ_G0020649) #16	Mad2l1bp (MGP_PahariEiJ_G0020650) #17	Gtpbp2 (MGP_PahariEiJ_G0020651) #18	Polh (MGP_PahariEiJ_G0020652) #19	Xpo5 (MGP_PahariEiJ_G0020653) #20	Polr1c (MGP_PahariEiJ_G0020654) #21	Yipf3 (MGP_PahariEiJ_G0020655) #22	Lrrc73 (MGP_PahariEiJ_G0020656) #23	MGP_PahariEiJ_G0020657	Dlk2 (MGP_PahariEiJ_G0020658) #25	Abcc10 (MGP_PahariEiJ_G0020659) #28	Zfp318 (MGP_PahariEiJ_G0020660) #29	MGP_PahariEiJ_G0020661 #30	Slc22a7 (MGP_PahariEiJ_G0020662) #31	Ttbk1 (MGP_PahariEiJ_G0020663) #32	Dnph1 (MGP_PahariEiJ_G0020664) #33	Cul9 (MGP_PahariEiJ_G0020665) #34	Srf (MGP_PahariEiJ_G0020666) #35	Ptk7 (MGP_PahariEiJ_G0020667) #36	Klc4 (MGP_PahariEiJ_G0020668) #37	Mrpl2 (MGP_PahariEiJ_G0020669)	Cul7 (MGP_PahariEiJ_G0020670) ##34
Rat	MODERN SPECIES	19	Slc29a1 (ENSRNOG00000019752) #10	Mymx (ENSRNOG00000042497)	Capn11 (ENSRNOG00000026025) #11	Tmem63b (ENSRNOG00000019743) #12	Mrpl14 (ENSRNOG00000019734) #13	Aars2 (ENSRNOG00000025808)	Vegfa (ENSRNOG00000019598) #14	Mrps18a (ENSRNOG00000019511) #15	Rsph9 (ENSRNOG00000019474) #16	Mad2l1bp (ENSRNOG00000019463) #17	Rps2-ps6 (ENSRNOG00000022934)	Gtpbp2 (ENSRNOG00000019332) #18	Polh (ENSRNOG00000019195) #19	Xpo5 (ENSRNOG00000019085) #20	Polr1c (ENSRNOG00000019079) #21	Yipf3 (ENSRNOG00000018998) #22	Lrrc73 (ENSRNOG00000039856) #23	Tjap1 (ENSRNOG00000018980)	Dlk2 (ENSRNOG00000018949) #25	Abcc10 (ENSRNOG00000018863) #28	Zfp318 (ENSRNOG00000018741) #29	Crip3 (ENSRNOG00000018613) #30	Slc22a7 (ENSRNOG00000018420) #31	Ttbk1 (ENSRNOG00000018416) #32	Dnph1 (ENSRNOG00000018397) #33	Cul9 (ENSRNOG00000018372) #34	Srf (ENSRNOG00000018232) #35	Ptk7 (ENSRNOG00000039976) #36	Klc4 (ENSRNOG00000018168) #37	Mrpl2 (ENSRNOG00000018057)	Cul7 (ENSRNOG00000017857) ##34
Lesser Egyptian jerboa	MODERN SPECIES	41	Slc35b2 (ENSJJAG00000020418) #8	Hsp90ab1 (ENSJJAG00000018744) #9	ENSJJAG00000021418 #10	Mymx (ENSJJAG00000013992)	Capn11 (ENSJJAG00000023762) #11	Tmem63b (ENSJJAG00000021961) #12	Mrpl14 (ENSJJAG00000021477) #13	Vegfa (ENSJJAG00000007689) #14	Mrps18a (ENSJJAG00000006567) #15	Rsph9 (ENSJJAG00000019847) #16	Mad2l1bp (ENSJJAG00000022925) #17	Gtpbp2 (ENSJJAG00000023430) #18	Polh (ENSJJAG00000013744) #19	Xpo5 (ENSJJAG00000009521) #20	Polr1c (ENSJJAG00000023110) #21	Yipf3 (ENSJJAG00000021863) #22	Lrrc73 (ENSJJAG00000022553) #23	ENSJJAG00000000504	Dlk2 (ENSJJAG00000013128) #25	Abcc10 (ENSJJAG00000023168) #28	Zfp318 (ENSJJAG00000018552) #29	Crip3 (ENSJJAG00000011758) #30	Slc22a7 (ENSJJAG00000013095) #31	ENSJJAG00000019825 #32	ENSJJAG00000022638 #33	Cul9 (ENSJJAG00000012861) #34	Srf (ENSJJAG00000021937) #35	Ptk7 (ENSJJAG00000015230) #36	Klc4 (ENSJJAG00000015105) #37	Mrpl2 (ENSJJAG00000009715)	Cul7 (ENSJJAG00000010201) ##34
Kangaroo rat	MODERN SPECIES	363	Hsp90ab1 (ENSDORG00000010981) #9	ENSDORG00000006421	Capn11 (ENSDORG00000026068) #11	Tmem63b (ENSDORG00000008237) #12	Mrpl14 (ENSDORG00000008236) #13	ENSDORG00000025211	ENSDORG00000027181 #14	ENSDORG00000023174 #14	Mrps18a (ENSDORG00000014583) #15	Rsph9 (ENSDORG00000014581) #16	Mad2l1bp (ENSDORG00000027056) #17	Gtpbp2 (ENSDORG00000000443) #18	Polh (ENSDORG00000000441) #19	Xpo5 (ENSDORG00000000432) #20	Polr1c (ENSDORG00000000429) #21	Yipf3 (ENSDORG00000000424) #22	Lrrc73 (ENSDORG00000023671) #23	Tjap1 (ENSDORG00000000420) #24	Dlk2 (ENSDORG00000001159) #25	Abcc10 (ENSDORG00000001157) #28	Zfp318 (ENSDORG00000010890) #29	Crip3 (ENSDORG00000010889) #30	Slc22a7 (ENSDORG00000010888) #31	ENSDORG00000010886 #32	ENSDORG00000026406 #33	Cul9 (ENSDORG00000002811) #34	Srf (ENSDORG00000000859) #35	Ptk7 (ENSDORG00000012193) #36	Klc4 (ENSDORG00000012190) #37	Mrpl2 (ENSDORG00000012189)	Rrp36 (ENSDORG00000012186)
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Marmotini	ANCESTRAL SPECIES	18	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00960000190714	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812.h #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Marmotini_b	ANCESTRAL SPECIES	8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00960000190714	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812.h #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Arctic ground squirrel	MODERN SPECIES	25											MAD2L1BP (ENSUPAG00010018636) #17	GTPBP2 (ENSUPAG00010018626) #18	POLH (ENSUPAG00010018589) #19	XPO5 (ENSUPAG00010018556) #20	POLR1C (ENSUPAG00010018540) #21	YIPF3 (ENSUPAG00010018525) #22	LRRC73 (ENSUPAG00010018517) #23	TJAP1 (ENSUPAG00010018437) #24	DLK2 (ENSUPAG00010018412) #25	ABCC10 (ENSUPAG00010018361) #28	ZNF318 (ENSUPAG00010018340) #29	CRIP3 (ENSUPAG00010018305) #30	SLC22A7 (ENSUPAG00010018280) #31	TTBK1 (ENSUPAG00010018241) #32	DNPH1 (ENSUPAG00010018235) #33	ENSUPAG00010018229 #34	ENSUPAG00010018129 #34	SRF (ENSUPAG00010018113) #35	PTK7 (ENSUPAG00010018092) #36	KLC4 (ENSUPAG00010018084) #37	MRPL2 (ENSUPAG00010018077)
Squirrel	MODERN SPECIES	76	SLC35B2 (ENSSTOG00000026446) #8	HSP90AB1 (ENSSTOG00000024614) #9	SLC29A1 (ENSSTOG00000003337) #10	MYMX (ENSSTOG00000030271)	CAPN11 (ENSSTOG00000003304) #11	TMEM63B (ENSSTOG00000007096) #12	MRPL14 (ENSSTOG00000004549) #13	VEGFA (ENSSTOG00000008877) #14	MRPS18A (ENSSTOG00000004490) #15	RSPH9 (ENSSTOG00000028063) #16	MAD2L1BP (ENSSTOG00000028891) #17	GTPBP2 (ENSSTOG00000021274) #18	POLH (ENSSTOG00000010681) #19	XPO5 (ENSSTOG00000020172) #20	POLR1C (ENSSTOG00000010631) #21	YIPF3 (ENSSTOG00000010624) #22	LRRC73 (ENSSTOG00000010618) #23	TJAP1 (ENSSTOG00000010606) #24	DLK2 (ENSSTOG00000010600) #25	ABCC10 (ENSSTOG00000010566) #28	ENSSTOG00000012280 #29	CRIP3 (ENSSTOG00000024025) #30	SLC22A7 (ENSSTOG00000024272) #31	TTBK1 (ENSSTOG00000014248) #32	DNPH1 (ENSSTOG00000026925) #33	CUL9 (ENSSTOG00000014226) #34	SRF (ENSSTOG00000014222) #35	PTK7 (ENSSTOG00000014198) #36	KLC4 (ENSSTOG00000014183) #37	MRPL2 (ENSSTOG00000023948)	CUL7 (ENSSTOG00000009522) ##34
Alpin marmot	MODERN SPECIES	20	HSP90AB1 (ENSMMMG00000024577) #9	SLC29A1 (ENSMMMG00000024571) #10	MYMX (ENSMMMG00000024570)	CAPN11 (ENSMMMG00000024569) #11	TMEM63B (ENSMMMG00000024568) #12	MRPL14 (ENSMMMG00000024567) #13	ENSMMMG00000024566	VEGFA (ENSMMMG00000024565) #14	MRPS18A (ENSMMMG00000024564) #15	RSPH9 (ENSMMMG00000024563) #16	ENSMMMG00000024562 #17	GTPBP2 (ENSMMMG00000024561) #18	POLH (ENSMMMG00000024560) #19	XPO5 (ENSMMMG00000024559) #20	POLR1C (ENSMMMG00000024558) #21	YIPF3 (ENSMMMG00000024557) #22	LRRC73 (ENSMMMG00000024556) #23	TJAP1 (ENSMMMG00000024555) #24	DLK2 (ENSMMMG00000024553) #25	ABCC10 (ENSMMMG00000024552) #28	ENSMMMG00000024551	ZNF318 (ENSMMMG00000024550) #29	CRIP3 (ENSMMMG00000024549) #30	SLC22A7 (ENSMMMG00000024548) #31	TTBK1 (ENSMMMG00000024547) #32	DNPH1 (ENSMMMG00000024546) #33	CUL9 (ENSMMMG00000024544) #34	SRF (ENSMMMG00000024543) #35	PTK7 (ENSMMMG00000024542) #36	KLC4 (ENSMMMG00000024541) #37	MRPL2 (ENSMMMG00000024538)
Eurasian red squirrel	MODERN SPECIES	16	HSP90AB1 (ENSSVLG00005004982) #9	SLC29A1 (ENSSVLG00005004999) #10	MYMX (ENSSVLG00005005017)	CAPN11 (ENSSVLG00005005041) #11	TMEM63B (ENSSVLG00005005124) #12	MRPL14 (ENSSVLG00005005175) #13	VEGFA (ENSSVLG00005005248) #14	MRPS18A (ENSSVLG00005005389) #15	RSPH9 (ENSSVLG00005005429) #16	MAD2L1BP (ENSSVLG00005005455) #17	ENSSVLG00005005500 #18	POLH (ENSSVLG00005005606) #19	ENSSVLG00005005709	XPO5 (ENSSVLG00005005755) #20	POLR1C (ENSSVLG00005005820) #21	YIPF3 (ENSSVLG00005005873) #22	LRRC73 (ENSSVLG00005005929) #23	TJAP1 (ENSSVLG00005005960) #24	DLK2 (ENSSVLG00005006024) #25	ABCC10 (ENSSVLG00005006073) #28	ZNF318 (ENSSVLG00005006110) #29	CRIP3 (ENSSVLG00005006201) #30	SLC22A7 (ENSSVLG00005006303) #31	TTBK1 (ENSSVLG00005006427) #32	DNPH1 (ENSSVLG00005006570) #33	CUL9 (ENSSVLG00005006664) #34	SRF (ENSSVLG00005006722) #35	PTK7 (ENSSVLG00005006890) #36	KLC4 (ENSSVLG00005007306) #37	MRPL2 (ENSSVLG00005007449)	CUL7 (ENSSVLG00005007507) ##34
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Naked mole-rat female	MODERN SPECIES	4	SLC35B2 (ENSHGLG00000013337) #8	HSP90AB1 (ENSHGLG00000013490) #9	SLC29A1 (ENSHGLG00000013873) #10	MYMX (ENSHGLG00000014348)	ENSHGLG00000034302 #11	TMEM63B (ENSHGLG00000014725) #12	MRPL14 (ENSHGLG00000048124) #13	VEGFA (ENSHGLG00000045954) #14	MRPS18A (ENSHGLG00000014356) #15	RSPH9 (ENSHGLG00000050155) #16	MAD2L1BP (ENSHGLG00000014709) #17	GTPBP2 (ENSHGLG00000014886) #18	POLH (ENSHGLG00000019433) #19	XPO5 (ENSHGLG00000019191) #20	POLR1C (ENSHGLG00000039530) #21	YIPF3 (ENSHGLG00000019245) #22	LRRC73 (ENSHGLG00000019162) #23	TJAP1 (ENSHGLG00000050716) #24	DLK2 (ENSHGLG00000017186) #25	ABCC10 (ENSHGLG00000017199) #28	ZNF318 (ENSHGLG00000017209) #29	CRIP3 (ENSHGLG00000017216) #30	SLC22A7 (ENSHGLG00000019228) #31	TTBK1 (ENSHGLG00000019189) #32	DNPH1 (ENSHGLG00000045212) #33	CUL9 (ENSHGLG00000019373) #34	ENSHGLG00000019183 #35	ENSHGLG00000049441 #36	ENSHGLG00000032903	ENSHGLG00000017195	ZBTB22 (ENSHGLG00000017146)
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000159120 #7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Hystricomorpha_b	ANCESTRAL SPECIES	3	ENSGT00940000159120 #7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Long-tailed chinchilla	MODERN SPECIES	144	NFKBIE (ENSCLAG00000011710) #7	SLC35B2 (ENSCLAG00000010878) #8	HSP90AB1 (ENSCLAG00000015740) #9	SLC29A1 (ENSCLAG00000010529) #10	CAPN11 (ENSCLAG00000013084) #11	TMEM63B (ENSCLAG00000014238) #12	MRPL14 (ENSCLAG00000016855) #13	ENSCLAG00000014201 #14	MRPS18A (ENSCLAG00000012929) #15	RSPH9 (ENSCLAG00000012706) #16	MAD2L1BP (ENSCLAG00000011121) #17	GTPBP2 (ENSCLAG00000010271) #18	POLH (ENSCLAG00000010068) #19	XPO5 (ENSCLAG00000009723) #20	POLR1C (ENSCLAG00000009266) #21	YIPF3 (ENSCLAG00000015747) #22	LRRC73 (ENSCLAG00000015757) #23	TJAP1 (ENSCLAG00000009058) #24	DLK2 (ENSCLAG00000012976) #25	ABCC10 (ENSCLAG00000012360) #28	ZNF318 (ENSCLAG00000009156) #29	CRIP3 (ENSCLAG00000010491) #30	SLC22A7 (ENSCLAG00000009201) #31	TTBK1 (ENSCLAG00000012525) #32	DNPH1 (ENSCLAG00000011315) #33	CUL9 (ENSCLAG00000013036) #34	SRF (ENSCLAG00000010541) #35	PTK7 (ENSCLAG00000011720) #36	KLC4 (ENSCLAG00000012910) #37	MRPL2 (ENSCLAG00000011117)	CUL7 (ENSCLAG00000009633) ##34
Degu	MODERN SPECIES	46	NFKBIE (ENSODEG00000015243) #7	SLC35B2 (ENSODEG00000015458) #8	ENSODEG00000015488 ##9	ENSODEG00000015863	CAPN11 (ENSODEG00000015728) #11	TMEM63B (ENSODEG00000015474) #12	MRPL14 (ENSODEG00000015718) #13	ENSODEG00000016904 #14	MRPS18A (ENSODEG00000015388) #15	RSPH9 (ENSODEG00000015426) #16	MAD2L1BP (ENSODEG00000015761) #17	GTPBP2 (ENSODEG00000015979) #18	POLH (ENSODEG00000015994) #19	XPO5 (ENSODEG00000017078) #20	ENSODEG00000015831 #21	YIPF3 (ENSODEG00000016177) #22	LRRC73 (ENSODEG00000015609) #23	TJAP1 (ENSODEG00000016503) #24	DLK2 (ENSODEG00000015810) #25	ABCC10 (ENSODEG00000016331) #28	ZNF318 (ENSODEG00000015646) #29	ENSODEG00000020345	CRIP3 (ENSODEG00000015500) #30	SLC22A7 (ENSODEG00000016284) #31	ENSODEG00000015919 #32	DNPH1 (ENSODEG00000015708) #33	CUL9 (ENSODEG00000016007) #34	SRF (ENSODEG00000016147) #35	PTK7 (ENSODEG00000015717) #36	KLC4 (ENSODEG00000016341) #37	MRPL2 (ENSODEG00000015619)
Guinea pig	MODERN SPECIES	15	NFKBIE (ENSCPOG00000020455) #7	SLC35B2 (ENSCPOG00000032240) #8	HSP90AB1 (ENSCPOG00000003887) #9	SLC29A1 (ENSCPOG00000005137) #10	CAPN11 (ENSCPOG00000020426) #11	TMEM63B (ENSCPOG00000026287) #12	MRPL14 (ENSCPOG00000031064) #13	ENSCPOG00000013559 #14	MRPS18A (ENSCPOG00000022949) #15	RSPH9 (ENSCPOG00000020076) #16	MAD2L1BP (ENSCPOG00000036430) #17	GTPBP2 (ENSCPOG00000026957) #18	POLH (ENSCPOG00000013907) #19	XPO5 (ENSCPOG00000009917) #20	POLR1C (ENSCPOG00000038098) #21	YIPF3 (ENSCPOG00000009908) #22	LRRC73 (ENSCPOG00000024689) #23	TJAP1 (ENSCPOG00000009903) #24	DLK2 (ENSCPOG00000037284) #25	ABCC10 (ENSCPOG00000009891) #28	ZNF318 (ENSCPOG00000009884) #29	CRIP3 (ENSCPOG00000025292) #30	SLC22A7 (ENSCPOG00000012952) #31	TTBK1 (ENSCPOG00000039436) #32	DNPH1 (ENSCPOG00000025216) #33	CUL9 (ENSCPOG00000003615) #34	SRF (ENSCPOG00000022327) #35	PTK7 (ENSCPOG00000003045) #36	KLC4 (ENSCPOG00000000230) #37	MRPL2 (ENSCPOG00000024326)	CUL7 (ENSCPOG00000008848) ##34
Lagomorpha	ANCESTRAL SPECIES	2	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Rabbit	MODERN SPECIES	3	SLC35B2 (ENSOCUG00000017893) #8	HSP90AB1 (ENSOCUG00000012842) ##9	SLC29A1 (ENSOCUG00000017891) #10	MYMX (ENSOCUG00000034679)	CAPN11 (ENSOCUG00000017535) #11	ENSOCUG00000015740 #13	TMEM63B (ENSOCUG00000003464) #12	VEGFA (ENSOCUG00000011610) #14	MRPS18A (ENSOCUG00000005544) #15	RSPH9 (ENSOCUG00000005537) #16	MAD2L1BP (ENSOCUG00000005532) #17	GTPBP2 (ENSOCUG00000005529) #18	POLH (ENSOCUG00000005525) #19	XPO5 (ENSOCUG00000005510) #20	POLR1C (ENSOCUG00000005504) #21	YIPF3 (ENSOCUG00000005499) #22	LRRC73 (ENSOCUG00000005243) #23	TJAP1 (ENSOCUG00000023704) #24	DLK2 (ENSOCUG00000004371) #25	ABCC10 (ENSOCUG00000004357) #28	ZNF318 (ENSOCUG00000002302) #29	CRIP3 (ENSOCUG00000005795) #30	SLC22A7 (ENSOCUG00000005788) #31	TTBK1 (ENSOCUG00000028112) #32	DNPH1 (ENSOCUG00000021203) #33	CUL9 (ENSOCUG00000002897) #34	SRF (ENSOCUG00000002892) #35	PTK7 (ENSOCUG00000002874) #36	KLC4 (ENSOCUG00000001590) #37	MRPL2 (ENSOCUG00000001586)	CUL7 (ENSOCUG00000001578) ##34
Pika	MODERN SPECIES	817												GTPBP2 (ENSOPRG00000000150) #18	POLH (ENSOPRG00000000149) #19	XPO5 (ENSOPRG00000000146) #20	POLR1C (ENSOPRG00000000145) #21	YIPF3 (ENSOPRG00000000143) #22	LRRC73 (ENSOPRG00000000142) #23	TJAP1 (ENSOPRG00000000141) #24	ABCC10 (ENSOPRG00000000128) #28
Primates	ANCESTRAL SPECIES	5	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Mouse lemur	MODERN SPECIES	28	SLC35B2 (ENSMICG00000027103) #8	ENSMICG00000013394 ##9	SLC29A1 (ENSMICG00000038074) #10	CAPN11 (ENSMICG00000013043) #11	TMEM63B (ENSMICG00000013024) #12	MRPL14 (ENSMICG00000013022) #13	VEGFA (ENSMICG00000005068) #14	MRPS18A (ENSMICG00000005062) #15	RSPH9 (ENSMICG00000005058) #16	ENSMICG00000036804	MAD2L1BP (ENSMICG00000005055) #17	GTPBP2 (ENSMICG00000005049) #18	POLH (ENSMICG00000005044) #19	XPO5 (ENSMICG00000005032) #20	POLR1C (ENSMICG00000005027) #21	YIPF3 (ENSMICG00000005021) #22	LRRC73 (ENSMICG00000005015) #23	TJAP1 (ENSMICG00000005000) #24	DLK2 (ENSMICG00000008948) #25	ABCC10 (ENSMICG00000004986) #28	ZNF318 (ENSMICG00000008398) #29	CRIP3 (ENSMICG00000008393) #30	SLC22A7 (ENSMICG00000008384) #31	TTBK1 (ENSMICG00000008369) #32	DNPH1 (ENSMICG00000008364) #33	CUL9 (ENSMICG00000008335) #34	SRF (ENSMICG00000027236) #35	PTK7 (ENSMICG00000008302) #36	KLC4 (ENSMICG00000008292) #37	MRPL2 (ENSMICG00000008282)	CUL7 (ENSMICG00000008269) ##34
Lemuriformes_a	ANCESTRAL SPECIES	4	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Coquerels sifaka	MODERN SPECIES	209	NFKBIE (ENSPCOG00000017997) #7	SLC35B2 (ENSPCOG00000022881) #8	HSP90AB1 (ENSPCOG00000014792) #9	SLC29A1 (ENSPCOG00000026818) #10	CAPN11 (ENSPCOG00000022203) #11	TMEM63B (ENSPCOG00000010720) #12	MRPL14 (ENSPCOG00000018403) #13	VEGFA (ENSPCOG00000024221) #14	MRPS18A (ENSPCOG00000014911) #15	RSPH9 (ENSPCOG00000013626) #16	MAD2L1BP (ENSPCOG00000018428) #17	GTPBP2 (ENSPCOG00000013032) #18	POLH (ENSPCOG00000016246) #19	XPO5 (ENSPCOG00000028854) #20	POLR1C (ENSPCOG00000024628) #21	YIPF3 (ENSPCOG00000022721) #22	LRRC73 (ENSPCOG00000026727) #23	TJAP1 (ENSPCOG00000017355) #24	DLK2 (ENSPCOG00000017798) #25	ABCC10 (ENSPCOG00000024127) #28	ZNF318 (ENSPCOG00000028612) #29	CRIP3 (ENSPCOG00000023062) #30	SLC22A7 (ENSPCOG00000016937) #31	ENSPCOG00000025230 #32	DNPH1 (ENSPCOG00000020070) #33	CUL9 (ENSPCOG00000019251) #34	SRF (ENSPCOG00000022006) #35	PTK7 (ENSPCOG00000017949) #36	KLC4 (ENSPCOG00000025855) #37	MRPL2 (ENSPCOG00000016309)	CUL7 (ENSPCOG00000019001) ##34
Greater bamboo lemur	MODERN SPECIES	305	SLC35B2 (ENSPSMG00000019040) #8	HSP90AB1 (ENSPSMG00000018961) #9	SLC29A1 (ENSPSMG00000018858) #10	MYMX (ENSPSMG00000018800)	CAPN11 (ENSPSMG00000018791) #11	TMEM63B (ENSPSMG00000018668) #12	MRPL14 (ENSPSMG00000018525) #13	VEGFA (ENSPSMG00000018375) #14	MRPS18A (ENSPSMG00000018246) #15	RSPH9 (ENSPSMG00000018228) #16	MAD2L1BP (ENSPSMG00000018221) #17	GTPBP2 (ENSPSMG00000018214) #18	POLH (ENSPSMG00000018199) #19	XPO5 (ENSPSMG00000018128) #20	POLR1C (ENSPSMG00000018003) #21	YIPF3 (ENSPSMG00000017965) #22	LRRC73 (ENSPSMG00000017951) #23	TJAP1 (ENSPSMG00000017881) #24	DLK2 (ENSPSMG00000017798) #25	ABCC10 (ENSPSMG00000017786) #28	ZNF318 (ENSPSMG00000017751) #29	CRIP3 (ENSPSMG00000017742) #30	SLC22A7 (ENSPSMG00000017736) #31	TTBK1 (ENSPSMG00000017724) #32	DNPH1 (ENSPSMG00000017681) #33	CUL9 (ENSPSMG00000017664) #34	SRF (ENSPSMG00000017620) #35	PTK7 (ENSPSMG00000017499) #36	KLC4 (ENSPSMG00000017239) #37	MRPL2 (ENSPSMG00000017209)	CUL7 (ENSPSMG00000016995) ##34
Bushbaby	MODERN SPECIES	146	NFKBIE (ENSOGAG00000028890) #7	SLC35B2 (ENSOGAG00000029873) #8	ENSOGAG00000011961 ##9	SLC29A1 (ENSOGAG00000011955) #10	CAPN11 (ENSOGAG00000012715) #11	TMEM63B (ENSOGAG00000001281) #12	MRPL14 (ENSOGAG00000024589) #13	ENSOGAG00000000338 #14	MRPS18A (ENSOGAG00000026551) #15	RSPH9 (ENSOGAG00000016981) #16	MAD2L1BP (ENSOGAG00000016977) #17	GTPBP2 (ENSOGAG00000014246) #18	POLH (ENSOGAG00000016976) #19	XPO5 (ENSOGAG00000016321) #20	POLR1C (ENSOGAG00000016318) #21	YIPF3 (ENSOGAG00000016312) #22	LRRC73 (ENSOGAG00000016310) #23	TJAP1 (ENSOGAG00000016307) #24	DLK2 (ENSOGAG00000027836) #25	ABCC10 (ENSOGAG00000016288) #28	ZNF318 (ENSOGAG00000016276) #29	CRIP3 (ENSOGAG00000016274) #30	SLC22A7 (ENSOGAG00000025350) #31	TTBK1 (ENSOGAG00000016267) #32	DNPH1 (ENSOGAG00000027385) #33	CUL9 (ENSOGAG00000016252) #34	SRF (ENSOGAG00000029623) #35	PTK7 (ENSOGAG00000016239) #36	KLC4 (ENSOGAG00000012712) #37	MRPL2 (ENSOGAG00000034421)	CUL7 (ENSOGAG00000012700) ##34
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Tarsier	MODERN SPECIES	5049													FUBP3 (ENSTSYG00000028199)	ENSTSYG00000035070 #20	POLR1C (ENSTSYG00000011921) #21	YIPF3 (ENSTSYG00000003148) #22	LRRC73 (ENSTSYG00000003976) #23	TJAP1 (ENSTSYG00000034623) #24	DLK2 (ENSTSYG00000034289) #25	ABCC10 (ENSTSYG00000005414) #28
Simiiformes	ANCESTRAL SPECIES	5	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048.i #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Cebidae	ANCESTRAL SPECIES	5	ENSGT01020000230401.a.a.a.i.a.a.l #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048.i #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Cebidae_a	ANCESTRAL SPECIES	25	ENSGT01020000230401.a.a.a.i.a.a.l #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048.i #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Capuchin	MODERN SPECIES	197	SLC35B2 (ENSCCAG00000036364) #8	ENSCCAG00000028238 #9	SLC29A1 (ENSCCAG00000037630) #10	ENSCCAG00000036544	CAPN11 (ENSCCAG00000030442) #11	TMEM63B (ENSCCAG00000000296) #12	MRPL14 (ENSCCAG00000010453) #13	ENSCCAG00000024490	VEGFA (ENSCCAG00000032427) #14	MRPS18A (ENSCCAG00000021108) #15	RSPH9 (ENSCCAG00000037740) #16	ENSCCAG00000026449 #17	GTPBP2 (ENSCCAG00000034278) #18	POLH (ENSCCAG00000037764) #19	XPO5 (ENSCCAG00000017800) #20	YIPF3 (ENSCCAG00000022689) #22	POLR1C (ENSCCAG00000020169) #21	LRRC73 (ENSCCAG00000024158) #23	TJAP1 (ENSCCAG00000020836) #24	DLK2 (ENSCCAG00000033179) #25	ABCC10 (ENSCCAG00000027143) #28	ZNF318 (ENSCCAG00000032591) #29	CRIP3 (ENSCCAG00000026017) #30	SLC22A7 (ENSCCAG00000029157) #31	TTBK1 (ENSCCAG00000030223) #32	DNPH1 (ENSCCAG00000021417) #33	CUL9 (ENSCCAG00000024058) #34	SRF (ENSCCAG00000037773) #35	PTK7 (ENSCCAG00000037314) #36	KLC4 (ENSCCAG00000036348) #37	MRPL2 (ENSCCAG00000037139)
Bolivian squirrel monkey	MODERN SPECIES	49	SLC29A1 (ENSSBOG00000025930) #10	MYMX (ENSSBOG00000019228)	ENSSBOG00000033471	CAPN11 (ENSSBOG00000026495) #11	TMEM63B (ENSSBOG00000035379) #12	MRPL14 (ENSSBOG00000028248) #13	ENSSBOG00000029474	ENSSBOG00000030789 #14	MRPS18A (ENSSBOG00000019943) #15	RSPH9 (ENSSBOG00000031703) #16	MAD2L1BP (ENSSBOG00000029545) #17	GTPBP2 (ENSSBOG00000033640) #18	POLH (ENSSBOG00000021399) #19	XPO5 (ENSSBOG00000004763) #20	POLR1C (ENSSBOG00000025735) #21	YIPF3 (ENSSBOG00000020836) #22	LRRC73 (ENSSBOG00000029933) #23	TJAP1 (ENSSBOG00000034133) #24	DLK2 (ENSSBOG00000029284) #25	ABCC10 (ENSSBOG00000030546) #28	ZNF318 (ENSSBOG00000021601) #29	CRIP3 (ENSSBOG00000029366) #30	SLC22A7 (ENSSBOG00000022201) #31	TTBK1 (ENSSBOG00000023302) #32	ENSSBOG00000033212	DNPH1 (ENSSBOG00000035435) #33	CUL9 (ENSSBOG00000033084) #34	SRF (ENSSBOG00000033949) #35	PTK7 (ENSSBOG00000021487) #36	KLC4 (ENSSBOG00000023983) #37	MRPL2 (ENSSBOG00000034838)
Marmoset	MODERN SPECIES	16	SLC35B2 (ENSCJAG00000046050) #8	HSP90AB1 (ENSCJAG00000046966) #9	SLC29A1 (ENSCJAG00000012328) #10	MYMX (ENSCJAG00000022396)	ENSCJAG00000046846	CAPN11 (ENSCJAG00000012346) #11	TMEM63B (ENSCJAG00000012369) #12	MRPL14 (ENSCJAG00000012454) #13	VEGFA (ENSCJAG00000012459) #14	MRPS18A (ENSCJAG00000017382) #15	RSPH9 (ENSCJAG00000017374) #16	MAD2L1BP (ENSCJAG00000005854) #17	GTPBP2 (ENSCJAG00000005800) #18	POLH (ENSCJAG00000005770) #19	XPO5 (ENSCJAG00000005612) #20	YIPF3 (ENSCJAG00000005563) #22	LRRC73 (ENSCJAG00000005532) #23	TJAP1 (ENSCJAG00000005594) #24	DLK2 (ENSCJAG00000005485) #25	ABCC10 (ENSCJAG00000005446) #28	ENSCJAG00000086465	ZNF318 (ENSCJAG00000005420) #29	CRIP3 (ENSCJAG00000005390) #30	SLC22A7 (ENSCJAG00000005355) #31	TTBK1 (ENSCJAG00000005343) #32	DNPH1 (ENSCJAG00000005337) #33	CUL9 (ENSCJAG00000005240) #34	SRF (ENSCJAG00000005223) #35	PTK7 (ENSCJAG00000005136) #36	KLC4 (ENSCJAG00000004979) #37	MRPL2 (ENSCJAG00000073816)
Mas night monkey	MODERN SPECIES	882	MYMX (ENSANAG00000019285)	CAPN11 (ENSANAG00000021503) #11	ENSANAG00000022828	TMEM63B (ENSANAG00000025745) #12	MRPL14 (ENSANAG00000025052) #13	ENSANAG00000026877	VEGFA (ENSANAG00000021825) #14	ENSANAG00000019769	MRPS18A (ENSANAG00000030889) #15	RSPH9 (ENSANAG00000034070) #16	MAD2L1BP (ENSANAG00000031169) #17	GTPBP2 (ENSANAG00000037352) #18	POLH (ENSANAG00000036689) #19	XPO5 (ENSANAG00000029648) #20	POLR1C (ENSANAG00000025805) #21	YIPF3 (ENSANAG00000038223) #22	LRRC73 (ENSANAG00000030063) #23	TJAP1 (ENSANAG00000034946) #24	DLK2 (ENSANAG00000022648) #25	ABCC10 (ENSANAG00000020430) #28	ENSANAG00000026475	ZNF318 (ENSANAG00000032798) #29	CRIP3 (ENSANAG00000025487) #30	SLC22A7 (ENSANAG00000012666) #31	TTBK1 (ENSANAG00000037774) #32	DNPH1 (ENSANAG00000025672) #33	CUL9 (ENSANAG00000010029) #34	SRF (ENSANAG00000010879) #35	PTK7 (ENSANAG00000028874) #36	KLC4 (ENSANAG00000037680) #37	MRPL2 (ENSANAG00000037029)
Catarrhini	ANCESTRAL SPECIES	5	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000154259.l.c.a.a	ENSGT00940000161323 #37	ENSGT00940000153244.A
Vervet Monkey	MODERN SPECIES	8	HSP90AB1 (ENSCSAG00000012423) #9	SLC35B2 (ENSCSAG00000012413) #8	SLC29A1 (ENSCSAG00000012409) #10	CAPN11 (ENSCSAG00000012369) #11	TMEM63B (ENSCSAG00000012227) #12	ENSCSAG00000012220 #13	ENSCSAG00000012214	VEGFA (ENSCSAG00000012195) #14	MRPS18A (ENSCSAG00000012127) #15	RSPH9 (ENSCSAG00000012119) #16	MAD2L1BP (ENSCSAG00000012107) #17	GTPBP2 (ENSCSAG00000012105) #18	POLH (ENSCSAG00000012095) #19	XPO5 (ENSCSAG00000012047) #20	POLR1C (ENSCSAG00000011913) #21	YIPF3 (ENSCSAG00000011892) #22	LRRC73 (ENSCSAG00000011840) #23	TJAP1 (ENSCSAG00000011836) #24	DLK2 (ENSCSAG00000011827) #25	ABCC10 (ENSCSAG00000011802) #28	ZNF318 (ENSCSAG00000011718) #29	CRIP3 (ENSCSAG00000011708) #30	SLC22A7 (ENSCSAG00000011701) #31	TTBK1 (ENSCSAG00000011686) #32	DNPH1 (ENSCSAG00000011657) #33	CUL9 (ENSCSAG00000011645) #34	SRF (ENSCSAG00000011622) #35	PTK7 (ENSCSAG00000011617) #36	ENSCSAG00000019299	KLC4 (ENSCSAG00000011604) #37	MRPL2 (ENSCSAG00000011591)
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000154259.l.c.a.a.a	ENSGT00940000161323 #37	ENSGT00940000153244.A
Macaca	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00950000183198.c.a.b.a.a	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A
Pig-tailed macaque	MODERN SPECIES	157	HSP90AB1 (ENSMNEG00000034241) #9	SLC29A1 (ENSMNEG00000029998) #10	MYMX (ENSMNEG00000010782)	CAPN11 (ENSMNEG00000029403) #11	TMEM63B (ENSMNEG00000039311) #12	MRPL14 (ENSMNEG00000034641) #13	ENSMNEG00000029690	VEGFA (ENSMNEG00000041005) #14	MRPS18A (ENSMNEG00000044642) #15	RSPH9 (ENSMNEG00000045520) #16	MAD2L1BP (ENSMNEG00000042395) #17	GTPBP2 (ENSMNEG00000029284) #18	POLH (ENSMNEG00000042281) #19	XPO5 (ENSMNEG00000035404) #20	POLR1C (ENSMNEG00000028073) #21	YIPF3 (ENSMNEG00000044770) #22	LRRC73 (ENSMNEG00000033430) #23	TJAP1 (ENSMNEG00000025245) #24	DLK2 (ENSMNEG00000029917) #25	ABCC10 (ENSMNEG00000036492) #28	ZNF318 (ENSMNEG00000039136) #29	CRIP3 (ENSMNEG00000034964) #30	SLC22A7 (ENSMNEG00000033416) #31	TTBK1 (ENSMNEG00000034929) #32	DNPH1 (ENSMNEG00000026166) #33	CUL9 (ENSMNEG00000029802) #34	SRF (ENSMNEG00000041345) #35	ENSMNEG00000036785	PTK7 (ENSMNEG00000036909) #36	KLC4 (ENSMNEG00000044930) #37	MRPL2 (ENSMNEG00000029931)
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000159120 #7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Rhesus	MODERN SPECIES	14	SLC35B2 (ENSMMUG00000022687) #8	HSP90AB1 (ENSMMUG00000022685) #9	TMEM63B (ENSMMUG00000016230) #12	MRPL14 (ENSMMUG00000055882) #13	LINC03040 (ENSMMUG00000011364)	VEGFA (ENSMMUG00000004577) #14	ENSMMUG00000060582	MRPS18A (ENSMMUG00000014749) #15	RSPH9 (ENSMMUG00000053865) #16	MAD2L1BP (ENSMMUG00000059717) #17	GTPBP2 (ENSMMUG00000008890) #18	ENSMMUG00000055195	POLH (ENSMMUG00000008903) #19	XPO5 (ENSMMUG00000015193) #20	POLR1C (ENSMMUG00000015192) #21	YIPF3 (ENSMMUG00000023322) #22	LRRC73 (ENSMMUG00000051917) #23	TJAP1 (ENSMMUG00000023319) #24	ABCC10 (ENSMMUG00000015569) #28	DLK2 (ENSMMUG00000062054) #25	ZNF318 (ENSMMUG00000011567) #29	CRIP3 (ENSMMUG00000022942) #30	SLC22A7 (ENSMMUG00000022941) #31	TTBK1 (ENSMMUG00000017322) #32	DNPH1 (ENSMMUG00000013990) #33	CUL9 (ENSMMUG00000005434) #34	SRF (ENSMMUG00000000033) #35	PTK7 (ENSMMUG00000011670) #36	KLC4 (ENSMMUG00000011668) #37	CUL7 (ENSMMUG00000002451) ##34	RRP36 (ENSMMUG00000057976)
Crab-eating macaque	MODERN SPECIES	14	TCTE1 (ENSMFAG00000033042)	TMEM63B (ENSMFAG00000041643) #12	NFKBIE (ENSMFAG00000037930) #7	SLC35B2 (ENSMFAG00000037986) #8	HSP90AB1 (ENSMFAG00000038525) #9	MRPL14 (ENSMFAG00000041809) #13	ENSMFAG00000059266	VEGFA (ENSMFAG00000043991) #14	MRPS18A (ENSMFAG00000038311) #15	RSPH9 (ENSMFAG00000003254) #16	MAD2L1BP (ENSMFAG00000038892) #17	GTPBP2 (ENSMFAG00000037532) #18	POLH (ENSMFAG00000045603) #19	XPO5 (ENSMFAG00000038120) #20	POLR1C (ENSMFAG00000046295) #21	YIPF3 (ENSMFAG00000032170) #22	LRRC73 (ENSMFAG00000033631) #23	TJAP1 (ENSMFAG00000030989) #24	DLK2 (ENSMFAG00000000134) #25	ABCC10 (ENSMFAG00000036554) #28	ZNF318 (ENSMFAG00000019122) #29	CRIP3 (ENSMFAG00000030762) #30	SLC22A7 (ENSMFAG00000000127) #31	ENSMFAG00000034632 #32	DNPH1 (ENSMFAG00000038043) #33	CUL9 (ENSMFAG00000001906) #34	SRF (ENSMFAG00000043125) #35	PTK7 (ENSMFAG00000044413) #36	ENSMFAG00000053834	ENSMFAG00000034748	KLC4 (ENSMFAG00000038153) #37
Cercopithecinae_b	ANCESTRAL SPECIES	18	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000154259.l.c.a.a.a	ENSGT00940000161323 #37	ENSGT00940000153244.A
Olive baboon	MODERN SPECIES	16	HSP90AB1 (ENSPANG00000000442) #9	SLC29A1 (ENSPANG00000023625) #10	MYMX (ENSPANG00000034855)	CAPN11 (ENSPANG00000023068) #11	TMEM63B (ENSPANG00000023571) #12	ENSPANG00000046969 #13	ENSPANG00000005020	VEGFA (ENSPANG00000004079) #14	MRPS18A (ENSPANG00000006967) #15	RSPH9 (ENSPANG00000030372) #16	MAD2L1BP (ENSPANG00000020360) #17	GTPBP2 (ENSPANG00000023626) #18	POLH (ENSPANG00000016473) #19	XPO5 (ENSPANG00000004080) #20	POLR1C (ENSPANG00000009025) #21	YIPF3 (ENSPANG00000023627) #22	LRRC73 (ENSPANG00000005641) #23	TJAP1 (ENSPANG00000045338) #24	DLK2 (ENSPANG00000023628) #25	ABCC10 (ENSPANG00000015995) #28	ZNF318 (ENSPANG00000008158) #29	CRIP3 (ENSPANG00000007156) #30	SLC22A7 (ENSPANG00000024486) #31	TTBK1 (ENSPANG00000021604) #32	DNPH1 (ENSPANG00000020870) #33	CUL9 (ENSPANG00000023069) #34	SRF (ENSPANG00000006410) #35	PTK7 (ENSPANG00000015745) #36	KLC4 (ENSPANG00000007016) #37	MRPL2 (ENSPANG00000022610)	CUL7 (ENSPANG00000020449) ##34
Cercopithecinae_d	ANCESTRAL SPECIES	13	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000154259.l.c.a.a.a	ENSGT00940000161323 #37	ENSGT00940000153244.A
Sooty mangabey	MODERN SPECIES	97	HSP90AB1 (ENSCATG00000035400) #9	SLC29A1 (ENSCATG00000025154) #10	MYMX (ENSCATG00000020334)	CAPN11 (ENSCATG00000040416) #11	TMEM63B (ENSCATG00000041638) #12	MRPL14 (ENSCATG00000027037) #13	ENSCATG00000029856	VEGFA (ENSCATG00000030128) #14	MRPS18A (ENSCATG00000012963) #15	RSPH9 (ENSCATG00000030811) #16	MAD2L1BP (ENSCATG00000042247) #17	GTPBP2 (ENSCATG00000044605) #18	POLH (ENSCATG00000041260) #19	XPO5 (ENSCATG00000036321) #20	POLR1C (ENSCATG00000044045) #21	YIPF3 (ENSCATG00000038097) #22	LRRC73 (ENSCATG00000041876) #23	TJAP1 (ENSCATG00000037638) #24	DLK2 (ENSCATG00000044667) #25	ABCC10 (ENSCATG00000027767) #28	ZNF318 (ENSCATG00000018061) #29	ENSCATG00000032161	CRIP3 (ENSCATG00000039382) #30	SLC22A7 (ENSCATG00000041755) #31	TTBK1 (ENSCATG00000038616) #32	DNPH1 (ENSCATG00000034825) #33	CUL9 (ENSCATG00000036803) #34	SRF (ENSCATG00000033129) #35	ENSCATG00000036503	PTK7 (ENSCATG00000037287) #36	KLC4 (ENSCATG00000036991) #37
Drill	MODERN SPECIES	941	HSP90AB1 (ENSMLEG00000024522) #9	SLC29A1 (ENSMLEG00000037598) #10	MYMX (ENSMLEG00000024197)	CAPN11 (ENSMLEG00000032534) #11	TMEM63B (ENSMLEG00000036196) #12	MRPL14 (ENSMLEG00000030732) #13	ENSMLEG00000032234	ENSMLEG00000038668 #14	MRPS18A (ENSMLEG00000041828) #15	RSPH9 (ENSMLEG00000038825) #16	MAD2L1BP (ENSMLEG00000028705) #17	GTPBP2 (ENSMLEG00000020440) #18	POLH (ENSMLEG00000035423) #19	XPO5 (ENSMLEG00000035689) #20	POLR1C (ENSMLEG00000034818) #21	YIPF3 (ENSMLEG00000036767) #22	LRRC73 (ENSMLEG00000042718) #23	TJAP1 (ENSMLEG00000036943) #24	DLK2 (ENSMLEG00000032200) #25	ABCC10 (ENSMLEG00000043799) #28	ENSMLEG00000043913	ZNF318 (ENSMLEG00000036305) #29	CRIP3 (ENSMLEG00000041577) #30	SLC22A7 (ENSMLEG00000033756) #31	TTBK1 (ENSMLEG00000042191) #32	DNPH1 (ENSMLEG00000041639) #33	CUL9 (ENSMLEG00000032343) #34	SRF (ENSMLEG00000010779) #35	ENSMLEG00000035203	ENSMLEG00000036459	PTK7 (ENSMLEG00000033822) #36
Rhinopithecus	ANCESTRAL SPECIES	26	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493.g #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00950000183198.c.a.b.a.a.u.a	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A
Black snub-nosed monkey	MODERN SPECIES	593	SLC35B2 (ENSRBIG00000034146) #8	ENSRBIG00000042211 #9	SLC29A1 (ENSRBIG00000042697) #10	CAPN11 (ENSRBIG00000011545) #11	TMEM63B (ENSRBIG00000044671) #12	MRPL14 (ENSRBIG00000033909) #13	ENSRBIG00000039088	VEGFA (ENSRBIG00000041235) #14	MRPS18A (ENSRBIG00000028789) #15	RSPH9 (ENSRBIG00000040189) #16	MAD2L1BP (ENSRBIG00000030116) #17	GTPBP2 (ENSRBIG00000029462) #18	POLH (ENSRBIG00000028330) #19	XPO5 (ENSRBIG00000027492) #20	POLR1C (ENSRBIG00000007155) #21	YIPF3 (ENSRBIG00000024553) #22	LRRC73 (ENSRBIG00000013069) #23	TJAP1 (ENSRBIG00000026502) #24	DLK2 (ENSRBIG00000027824) #25	ABCC10 (ENSRBIG00000038106) #28	ZNF318 (ENSRBIG00000028800) #29	ENSRBIG00000035779	CRIP3 (ENSRBIG00000032426) #30	SLC22A7 (ENSRBIG00000035223) #31	TTBK1 (ENSRBIG00000034564) #32	DNPH1 (ENSRBIG00000033326) #33	CUL9 (ENSRBIG00000038845) #34	SRF (ENSRBIG00000000055) #35	PTK7 (ENSRBIG00000029424) #36	ENSRBIG00000026114	KLC4 (ENSRBIG00000036599) #37
Golden snub-nosed monkey	MODERN SPECIES	1467	SLC35B2 (ENSRROG00000032586) #8	ENSRROG00000044790 #9	SLC29A1 (ENSRROG00000028919) #10	CAPN11 (ENSRROG00000041564) #11	TMEM63B (ENSRROG00000033277) #12	MRPL14 (ENSRROG00000032944) #13	ENSRROG00000036982	VEGFA (ENSRROG00000043969) #14	ENSRROG00000042368 #15	RSPH9 (ENSRROG00000044978) #16	MAD2L1BP (ENSRROG00000032041) #17	GTPBP2 (ENSRROG00000027613) #18	POLH (ENSRROG00000036383) #19	XPO5 (ENSRROG00000030655) #20	POLR1C (ENSRROG00000000257) #21	YIPF3 (ENSRROG00000035727) #22	LRRC73 (ENSRROG00000014260) #23	TJAP1 (ENSRROG00000040743) #24	DLK2 (ENSRROG00000045486) #25	ABCC10 (ENSRROG00000037318) #28	ZNF318 (ENSRROG00000038950) #29	CRIP3 (ENSRROG00000029473) #30	SLC22A7 (ENSRROG00000013937) #31	TTBK1 (ENSRROG00000044648) #32	DNPH1 (ENSRROG00000012689) #33	CUL9 (ENSRROG00000034859) #34	SRF (ENSRROG00000034320) #35	ENSRROG00000004596	PTK7 (ENSRROG00000042804) #36	KLC4 (ENSRROG00000045767) #37	MRPL2 (ENSRROG00000032437)
Hominoidea	ANCESTRAL SPECIES	4	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Gibbon	MODERN SPECIES	7	SLC35B2 (ENSNLEG00000003703) #8	ENSNLEG00000029372 ##9	SLC29A1 (ENSNLEG00000003716) #10	MYMX (ENSNLEG00000019018)	ENSNLEG00000003797 #11	TMEM63B (ENSNLEG00000003801) #12	ENSNLEG00000003824	VEGFA (ENSNLEG00000003829) #14	MRPS18A (ENSNLEG00000003865) #15	ENSNLEG00000003901 #16	MAD2L1BP (ENSNLEG00000033665) #17	GTPBP2 (ENSNLEG00000003909) #18	POLH (ENSNLEG00000003958) #19	XPO5 (ENSNLEG00000003966) #20	POLR1C (ENSNLEG00000004035) #21	ENSNLEG00000004074 #22	LRRC73 (ENSNLEG00000004080) #23	ENSNLEG00000029088	DLK2 (ENSNLEG00000030265) #25	ABCC10 (ENSNLEG00000004134) #28	ZNF318 (ENSNLEG00000004151) #29	CRIP3 (ENSNLEG00000004164) #30	SLC22A7 (ENSNLEG00000004171) #31	ENSNLEG00000004198 #32	SRF (ENSNLEG00000004203) #35	PTK7 (ENSNLEG00000004223) #36	KLC4 (ENSNLEG00000004359) #37	MRPL2 (ENSNLEG00000004370)	CUL7 (ENSNLEG00000027449) ##34	RRP36 (ENSNLEG00000033289)	KLHDC3 (ENSNLEG00000004399)
Hominidae	ANCESTRAL SPECIES	5	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Orangutan	MODERN SPECIES	19	SLC35B2 (ENSPPYG00000032493) #8	HSP90AB1 (ENSPPYG00000016655) #9	SLC29A1 (ENSPPYG00000016654) #10	MYMX (ENSPPYG00000039061)	CAPN11 (ENSPPYG00000016652) #11	TMEM63B (ENSPPYG00000016651) #12	MRPL14 (ENSPPYG00000016650) #13	ENSPPYG00000016649	VEGFA (ENSPPYG00000016647) #14	MRPS18A (ENSPPYG00000017282) #15	MAD2L1BP (ENSPPYG00000017281) #17	GTPBP2 (ENSPPYG00000017279) #18	POLH (ENSPPYG00000033093) #19	XPO5 (ENSPPYG00000016646) #20	POLR1C (ENSPPYG00000016645) #21	YIPF3 (ENSPPYG00000016644) #22	ENSPPYG00000016643 #23	TJAP1 (ENSPPYG00000016642) #24	DLK2 (ENSPPYG00000016641) #25	ABCC10 (ENSPPYG00000016640) #28	ZNF318 (ENSPPYG00000016639) #29	CRIP3 (ENSPPYG00000016638) #30	SLC22A7 (ENSPPYG00000016637) #31	TTBK1 (ENSPPYG00000016636) #32	ENSPPYG00000016635 #33	CUL9 (ENSPPYG00000016634) #34	SRF (ENSPPYG00000016633) #35	PTK7 (ENSPPYG00000016632) #36	KLC4 (ENSPPYG00000016631) #37	MRPL2 (ENSPPYG00000016630)	CUL7 (ENSPPYG00000016629) ##34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00910000148752	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Gorilla	MODERN SPECIES	19	SLC29A1 (ENSGGOG00000008377) #10	MYMX (ENSGGOG00000022349)	CAPN11 (ENSGGOG00000003079) #11	TMEM63B (ENSGGOG00000003071) #12	MRPL14 (ENSGGOG00000006098) #13	ENSGGOG00000043300	ENSGGOG00000043498	VEGFA (ENSGGOG00000012714) #14	ENSGGOG00000006303 #15	ENSGGOG00000006299 #16	MAD2L1BP (ENSGGOG00000023906) #17	GTPBP2 (ENSGGOG00000014744) #18	ENSGGOG00000043699 #19	XPO5 (ENSGGOG00000007940) #20	POLR1C (ENSGGOG00000010903) #21	ENSGGOG00000010894 #22	LRRC73 (ENSGGOG00000015189) #23	TJAP1 (ENSGGOG00000015185) #24	DLK2 (ENSGGOG00000008606) #25	ABCC10 (ENSGGOG00000026443) #28	ZNF318 (ENSGGOG00000012851) #29	CRIP3 (ENSGGOG00000015193) #30	SLC22A7 (ENSGGOG00000015187) #31	TTBK1 (ENSGGOG00000000442) #32	ENSGGOG00000011357 #33	CUL9 (ENSGGOG00000005599) #34	ENSGGOG00000006293 #35	PTK7 (ENSGGOG00000010579) #36	KLC4 (ENSGGOG00000010558) #37	MRPL2 (ENSGGOG00000010552)	CUL7 (ENSGGOG00000010532) ##34
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00910000148752	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Human	MODERN SPECIES	18	NFKBIE (ENSG00000146232) #7	SLC35B2 (ENSG00000157593) #8	HSP90AB1 (ENSG00000096384) #9	SLC29A1 (ENSG00000112759) #10	MYMX (ENSG00000262179)	CAPN11 (ENSG00000137225) #11	TMEM63B (ENSG00000137216) #12	MRPL14 (ENSG00000180992) #13	VEGFA (ENSG00000112715) #14	MRPS18A (ENSG00000096080) #15	RSPH9 (ENSG00000172426) #16	MAD2L1BP (ENSG00000124688) #17	GTPBP2 (ENSG00000172432) #18	POLH (ENSG00000170734) #19	XPO5 (ENSG00000124571) #20	YIPF3 (ENSG00000137207) #22	POLR1C (ENSG00000171453) #21	LRRC73 (ENSG00000204052) #23	TJAP1 (ENSG00000137221) #24	DLK2 (ENSG00000171462) #25	ABCC10 (ENSG00000124574) #28	ZNF318 (ENSG00000171467) #29	CRIP3 (ENSG00000146215) #30	SLC22A7 (ENSG00000137204) #31	TTBK1 (ENSG00000146216) #32	DNPH1 (ENSG00000112667) #33	CUL9 (ENSG00000112659) #34	SRF (ENSG00000112658) #35	PTK7 (ENSG00000112655) #36	MRPL2 (ENSG00000112651)	KLC4 (ENSG00000137171) #37
Pan	ANCESTRAL SPECIES	5	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00910000148752	ENSGT00390000005085	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543.e #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Chimpanzee	MODERN SPECIES	19	MYMX (ENSPTRG00000043831)	CAPN11 (ENSPTRG00000018215) #11	TMEM63B (ENSPTRG00000018214) #12	MRPL14 (ENSPTRG00000018213) #13	ENSPTRG00000046423	LINC03040 (ENSPTRG00000044964)	VEGFA (ENSPTRG00000043213) #14	MRPS18A (ENSPTRG00000018209) #15	RSPH9 (ENSPTRG00000052351) #16	MAD2L1BP (ENSPTRG00000018207) #17	GTPBP2 (ENSPTRG00000018206) #18	POLH (ENSPTRG00000018205) #19	ENSPTRG00000047136	XPO5 (ENSPTRG00000018204) #20	POLR1C (ENSPTRG00000018202) #21	YIPF3 (ENSPTRG00000018201) #22	LRRC73 (ENSPTRG00000034451) #23	TJAP1 (ENSPTRG00000018199) #24	DLK2 (ENSPTRG00000018198) #25	ABCC10 (ENSPTRG00000018197) #28	ZNF318 (ENSPTRG00000018196) #29	CRIP3 (ENSPTRG00000018195) #30	SLC22A7 (ENSPTRG00000018194) #31	TTBK1 (ENSPTRG00000018193) #32	DNPH1 (ENSPTRG00000029662) #33	CUL9 (ENSPTRG00000018191) #34	SRF (ENSPTRG00000018189) #35	PTK7 (ENSPTRG00000018188) #36	KLC4 (ENSPTRG00000018187) #37	MRPL2 (ENSPTRG00000018186)	CUL7 (ENSPTRG00000018185) ##34
Bonobo	MODERN SPECIES	19	MYMX (ENSPPAG00000026302)	CAPN11 (ENSPPAG00000035892) #11	TMEM63B (ENSPPAG00000027102) #12	MRPL14 (ENSPPAG00000036858) #13	ENSPPAG00000041620	ENSPPAG00000033753	VEGFA (ENSPPAG00000027018) #14	MRPS18A (ENSPPAG00000036291) #15	ENSPPAG00000040963 #16	MAD2L1BP (ENSPPAG00000041364) #17	GTPBP2 (ENSPPAG00000034475) #18	POLH (ENSPPAG00000038133) #19	ENSPPAG00000040669	XPO5 (ENSPPAG00000039971) #20	POLR1C (ENSPPAG00000043678) #21	ENSPPAG00000015711 #22	LRRC73 (ENSPPAG00000041796) #23	TJAP1 (ENSPPAG00000029733) #24	DLK2 (ENSPPAG00000026818) #25	ABCC10 (ENSPPAG00000000313) #28	ZNF318 (ENSPPAG00000029882) #29	CRIP3 (ENSPPAG00000038946) #30	SLC22A7 (ENSPPAG00000038526) #31	TTBK1 (ENSPPAG00000033408) #32	ENSPPAG00000039553 #33	CUL9 (ENSPPAG00000036258) #34	SRF (ENSPPAG00000028594) #35	PTK7 (ENSPPAG00000039415) #36	KLC4 (ENSPPAG00000031629) #37	MRPL2 (ENSPPAG00000036609)	CUL7 (ENSPPAG00000035495) ##34
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Artiodactyla	ANCESTRAL SPECIES	15	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Suina	ANCESTRAL SPECIES	17	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Pig	MODERN SPECIES	15	SLC35B2 (ENSSSCG00000001702) #8	HSP90AB1 (ENSSSCG00000001701) #9	SLC29A1 (ENSSSCG00000001700) #10	MYMX (ENSSSCG00000053910)	CAPN11 (ENSSSCG00000001698) #11	TMEM63B (ENSSSCG00000001697) #12	ENSSSCG00000001696 #13	VEGFA (ENSSSCG00000001695) #14	MRPS18A (ENSSSCG00000001692) #15	RSPH9 (ENSSSCG00000001691) #16	MAD2L1BP (ENSSSCG00000016346) #17	GTPBP2 (ENSSSCG00000001689) #18	POLH (ENSSSCG00000001683) #19	XPO5 (ENSSSCG00000001679) #20	POLR1C (ENSSSCG00000028007) #21	YIPF3 (ENSSSCG00000033627) #22	LRRC73 (ENSSSCG00000001676) #23	TJAP1 (ENSSSCG00000001688) #24	DLK2 (ENSSSCG00000001682) #25	ABCC10 (ENSSSCG00000001680) #28	ZNF318 (ENSSSCG00000001667) #29	CRIP3 (ENSSSCG00000001672) #30	SLC22A7 (ENSSSCG00000027796) #31	TTBK1 (ENSSSCG00000001664) #32	DNPH1 (ENSSSCG00000026568) #33	CUL9 (ENSSSCG00000030196) #34	SRF (ENSSSCG00000001661) #35	PTK7 (ENSSSCG00000001660) #36	KLC4 (ENSSSCG00000001659) #37	MRPL2 (ENSSSCG00000001658)	CUL7 (ENSSSCG00000001657) ##34
Chacoan peccary	MODERN SPECIES	781	SLC35B2 (ENSCWAG00000013979) #8	HSP90AB1 (ENSCWAG00000014052) #9	SLC29A1 (ENSCWAG00000014160) #10	MYMX (ENSCWAG00000014424)	CAPN11 (ENSCWAG00000014460) #11	TMEM63B (ENSCWAG00000014863) #12	MRPL14 (ENSCWAG00000014930) #13	VEGFA (ENSCWAG00000015280) #14	MRPS18A (ENSCWAG00000015571) #15	RSPH9 (ENSCWAG00000015624) #16	MAD2L1BP (ENSCWAG00000015648) #17	GTPBP2 (ENSCWAG00000015681) #18	POLH (ENSCWAG00000015745) #19	XPO5 (ENSCWAG00000015792) #20	POLR1C (ENSCWAG00000015847) #21	YIPF3 (ENSCWAG00000015909) #22	LRRC73 (ENSCWAG00000015949) #23	TJAP1 (ENSCWAG00000015999) #24	DLK2 (ENSCWAG00000016037) #25	ABCC10 (ENSCWAG00000016106) #28	ZNF318 (ENSCWAG00000016153) #29	CRIP3 (ENSCWAG00000016242) #30	SLC22A7 (ENSCWAG00000016355) #31	TTBK1 (ENSCWAG00000016552) #32	CUL9 (ENSCWAG00000016761) #34	SRF (ENSCWAG00000016822) #35	PTK7 (ENSCWAG00000016875) #36	KLC4 (ENSCWAG00000017149) #37	MRPL2 (ENSCWAG00000017372)	CUL7 (ENSCWAG00000017434) ##34	RRP36 (ENSCWAG00000017498)
Artiodactyla_a	ANCESTRAL SPECIES	19	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Camelidae	ANCESTRAL SPECIES	13	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Arabian camel	MODERN SPECIES	12	SLC35B2 (ENSCDRG00005016257) #8	HSP90AB1 (ENSCDRG00005016031) #9	SLC29A1 (ENSCDRG00005015969) #10	MYMX (ENSCDRG00005015949)	CAPN11 (ENSCDRG00005015801) #11	TMEM63B (ENSCDRG00005015620) #12	ENSCDRG00005015582 #13	VEGFA (ENSCDRG00005015143) #14	MRPS18A (ENSCDRG00005015039) #15	RSPH9 (ENSCDRG00005014999) #16	MAD2L1BP (ENSCDRG00005014925) #17	GTPBP2 (ENSCDRG00005014856) #18	POLH (ENSCDRG00005014731) #19	XPO5 (ENSCDRG00005014588) #20	POLR1C (ENSCDRG00005014297) #21	YIPF3 (ENSCDRG00005014231) #22	LRRC73 (ENSCDRG00005014167) #23	TJAP1 (ENSCDRG00005014032) #24	DLK2 (ENSCDRG00005013956) #25	ABCC10 (ENSCDRG00005013835) #28	ZNF318 (ENSCDRG00005013778) #29	CRIP3 (ENSCDRG00005013526) #30	SLC22A7 (ENSCDRG00005013276) #31	ENSCDRG00005013231	TTBK1 (ENSCDRG00005013065) #32	DNPH1 (ENSCDRG00005012978) #33	CUL9 (ENSCDRG00005012732) #34	SRF (ENSCDRG00005012609) #35	ENSCDRG00005010109 #36	KLC4 (ENSCDRG00005009630) #37	MRPL2 (ENSCDRG00005009331)
Artiodactyla_b	ANCESTRAL SPECIES	15	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Cetacea	ANCESTRAL SPECIES	7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048.f #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Dolphin	MODERN SPECIES	904									MRPS18A (ENSTTRG00000006354) #15	ENSTTRG00000006353 #16	MAD2L1BP (ENSTTRG00000006352) #17	GTPBP2 (ENSTTRG00000006351) #18	POLH (ENSTTRG00000006350) #19	XPO5 (ENSTTRG00000006347) #20	POLR1C (ENSTTRG00000006344) #21	YIPF3 (ENSTTRG00000006343) #22	LRRC73 (ENSTTRG00000006341) #23	TJAP1 (ENSTTRG00000006339) #24	DLK2 (ENSTTRG00000006338) #25	ABCC10 (ENSTTRG00000006336) #28	ZNF318 (ENSTTRG00000006335) #29	CRIP3 (ENSTTRG00000006334) #30	SLC22A7 (ENSTTRG00000006330) #31	TTBK1 (ENSTTRG00000006319) #32
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048.f #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b.c #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Vaquita	MODERN SPECIES	2	SLC35B2 (ENSPSNG00000021691) #8	ENSPSNG00000021648 ##9	SLC29A1 (ENSPSNG00000021618) #10	MYMX (ENSPSNG00000021603)	CAPN11 (ENSPSNG00000021548) #11	TMEM63B (ENSPSNG00000021472) #12	MRPL14 (ENSPSNG00000021435) #13	VEGFA (ENSPSNG00000021211) #14	MRPS18A (ENSPSNG00000021141) #15	RSPH9 (ENSPSNG00000021111) #16	MAD2L1BP (ENSPSNG00000021072) #17	GTPBP2 (ENSPSNG00000021031) #18	ENSPSNG00000020987 #19	XPO5 (ENSPSNG00000020944) #20	POLR1C (ENSPSNG00000020863) #21	YIPF3 (ENSPSNG00000020740) #22	LRRC73 (ENSPSNG00000020698) #23	TJAP1 (ENSPSNG00000020662) #24	DLK2 (ENSPSNG00000020605) #25	ABCC10 (ENSPSNG00000020536) #28	ZNF318 (ENSPSNG00000020437) #29	CRIP3 (ENSPSNG00000020368) #30	SLC22A7 (ENSPSNG00000020232) #31	TTBK1 (ENSPSNG00000020172) #32	DNPH1 (ENSPSNG00000020109) #33	CUL9 (ENSPSNG00000017060) #34	SRF (ENSPSNG00000016782) #35	PTK7 (ENSPSNG00000016551) #36	KLC4 (ENSPSNG00000016174) #37	MRPL2 (ENSPSNG00000015994)	CUL7 (ENSPSNG00000015864) ##34
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048.f #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b.c #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Narwhal	MODERN SPECIES	310	SLC35B2 (ENSMMNG00015009735) #8	ENSMMNG00015009748 ##9	SLC29A1 (ENSMMNG00015009769) #10	MYMX (ENSMMNG00015009791)	CAPN11 (ENSMMNG00015009805) #11	TMEM63B (ENSMMNG00015009841) #12	MRPL14 (ENSMMNG00015009865) #13	VEGFA (ENSMMNG00015009915) #14	MRPS18A (ENSMMNG00015009954) #15	RSPH9 (ENSMMNG00015009969) #16	MAD2L1BP (ENSMMNG00015009979) #17	GTPBP2 (ENSMMNG00015009992) #18	POLH (ENSMMNG00015010012) #19	XPO5 (ENSMMNG00015010045) #20	POLR1C (ENSMMNG00015010142) #21	YIPF3 (ENSMMNG00015010162) #22	LRRC73 (ENSMMNG00015010202) #23	TJAP1 (ENSMMNG00015010214) #24	ENSMMNG00015010222	DLK2 (ENSMMNG00015010233) #25	ABCC10 (ENSMMNG00015010292) #28	ZNF318 (ENSMMNG00015010415) #29	CRIP3 (ENSMMNG00015010473) #30	SLC22A7 (ENSMMNG00015010512) #31	TTBK1 (ENSMMNG00015010569) #32	ENSMMNG00015010617 #33	CUL9 (ENSMMNG00015010945) #34	SRF (ENSMMNG00015011705) #35	PTK7 (ENSMMNG00015011763) #36	KLC4 (ENSMMNG00015011828) #37	MRPL2 (ENSMMNG00015011886)
Beluga whale	MODERN SPECIES	8	HSP90AB1 (ENSDLEG00000000345) ##9	SLC29A1 (ENSDLEG00000000310) #10	MYMX (ENSDLEG00000000300)	CAPN11 (ENSDLEG00000000227) #11	TMEM63B (ENSDLEG00000000075) #12	MRPL14 (ENSDLEG00000014995) #13	VEGFA (ENSDLEG00000014948) #14	MRPS18A (ENSDLEG00000014862) #15	RSPH9 (ENSDLEG00000014838) #16	MAD2L1BP (ENSDLEG00000014832) #17	GTPBP2 (ENSDLEG00000014789) #18	POLH (ENSDLEG00000014779) #19	ENSDLEG00000014771 #20	ENSDLEG00000014725 #20	POLR1C (ENSDLEG00000014677) #21	YIPF3 (ENSDLEG00000014644) #22	LRRC73 (ENSDLEG00000014586) #23	TJAP1 (ENSDLEG00000014550) #24	DLK2 (ENSDLEG00000014516) #25	ABCC10 (ENSDLEG00000014264) #28	ZNF318 (ENSDLEG00000014114) #29	CRIP3 (ENSDLEG00000014037) #30	ENSDLEG00000014003 #31	ENSDLEG00000013988 #31	ENSDLEG00000013865 #32	DNPH1 (ENSDLEG00000013851) #33	CUL9 (ENSDLEG00000013572) #34	SRF (ENSDLEG00000013532) #35	PTK7 (ENSDLEG00000013064) #36	KLC4 (ENSDLEG00000012979) #37	MRPL2 (ENSDLEG00000012957)
Sperm whale	MODERN SPECIES	1018														ENSPCTG00005012363 #20	POLR1C (ENSPCTG00005012391) #21	YIPF3 (ENSPCTG00005012464) #22
Blue whale	MODERN SPECIES	2	SLC35B2 (ENSBMSG00010018830) #8	ENSBMSG00010018890 ##9	SLC29A1 (ENSBMSG00010018936) #10	MYMX (ENSBMSG00010018956)	CAPN11 (ENSBMSG00010019043) #11	TMEM63B (ENSBMSG00010019402) #12	MRPL14 (ENSBMSG00010019442) #13	VEGFA (ENSBMSG00010019559) #14	MRPS18A (ENSBMSG00010020183) #15	RSPH9 (ENSBMSG00010020198) #16	MAD2L1BP (ENSBMSG00010020207) #17	GTPBP2 (ENSBMSG00010020226) #18	POLH (ENSBMSG00010020260) #19	XPO5 (ENSBMSG00010020321) #20	POLR1C (ENSBMSG00010020382) #21	YIPF3 (ENSBMSG00010020476) #22	LRRC73 (ENSBMSG00010020508) #23	ENSBMSG00010020526 #24	ENSBMSG00010020540	DLK2 (ENSBMSG00010020550) #25	ABCC10 (ENSBMSG00010020569) #28	ZNF318 (ENSBMSG00010020591) #29	CRIP3 (ENSBMSG00010020626) #30	SLC22A7 (ENSBMSG00010020677) #31	TTBK1 (ENSBMSG00010020721) #32	ENSBMSG00010020771 #33	CUL9 (ENSBMSG00010020813) #34	SRF (ENSBMSG00010020833) #35	PTK7 (ENSBMSG00010020901) #36	KLC4 (ENSBMSG00010009441) #37	MRPL2 (ENSBMSG00010009514)
Pecora	ANCESTRAL SPECIES	21	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Yarkand deer	MODERN SPECIES	30	ENSCHYG00000003288 ##9	SLC29A1 (ENSCHYG00000003261) #10	MYMX (ENSCHYG00000003237)	CAPN11 (ENSCHYG00000003195) #11	TMEM63B (ENSCHYG00000003109) #12	MRPL14 (ENSCHYG00000003077) #13	ENSCHYG00000003034	VEGFA (ENSCHYG00000002863) #14	MRPS18A (ENSCHYG00000002800) #15	RSPH9 (ENSCHYG00000002772) #16	ENSCHYG00000002760 #17	GTPBP2 (ENSCHYG00000002731) #18	POLH (ENSCHYG00000002691) #19	XPO5 (ENSCHYG00000002599) #20	POLR1C (ENSCHYG00000002490) #21	YIPF3 (ENSCHYG00000002418) #22	LRRC73 (ENSCHYG00000002399) #23	TJAP1 (ENSCHYG00000002358) #24	DLK2 (ENSCHYG00000002324) #25	ABCC10 (ENSCHYG00000002262) #28	ZNF318 (ENSCHYG00000002228) #29	CRIP3 (ENSCHYG00000002176) #30	SLC22A7 (ENSCHYG00000002139) #31	TTBK1 (ENSCHYG00000002102) #32	DNPH1 (ENSCHYG00000002079) #33	CUL9 (ENSCHYG00000001955) #34	SRF (ENSCHYG00000001910) #35	PTK7 (ENSCHYG00000001713) #36	KLC4 (ENSCHYG00000001448) #37	MRPL2 (ENSCHYG00000001334)	CUL7 (ENSCHYG00000001274) ##34
Percora_a	ANCESTRAL SPECIES	12	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Siberian musk deer	MODERN SPECIES	355	SLC35B2 (ENSMMSG00000008039) #8	ENSMMSG00000007967 ##9	SLC29A1 (ENSMMSG00000007929) #10	MYMX (ENSMMSG00000007910)	CAPN11 (ENSMMSG00000007786) #11	TMEM63B (ENSMMSG00000007690) #12	MRPL14 (ENSMMSG00000007639) #13	VEGFA (ENSMMSG00000007348) #14	MRPS18A (ENSMMSG00000007259) #15	RSPH9 (ENSMMSG00000007231) #16	MAD2L1BP (ENSMMSG00000007200) #17	GTPBP2 (ENSMMSG00000007098) #18	POLH (ENSMMSG00000007030) #19	XPO5 (ENSMMSG00000006908) #20	POLR1C (ENSMMSG00000006780) #21	YIPF3 (ENSMMSG00000006698) #22	LRRC73 (ENSMMSG00000006666) #23	TJAP1 (ENSMMSG00000006591) #24	DLK2 (ENSMMSG00000006539) #25	ABCC10 (ENSMMSG00000006490) #28	ZNF318 (ENSMMSG00000006414) #29	CRIP3 (ENSMMSG00000006365) #30	SLC22A7 (ENSMMSG00000006264) #31	ENSMMSG00000006214 #32	CUL9 (ENSMMSG00000005991) #34	SRF (ENSMMSG00000005948) #35	PTK7 (ENSMMSG00000005723) #36	KLC4 (ENSMMSG00000005498) #37	MRPL2 (ENSMMSG00000005368)	CUL7 (ENSMMSG00000005254) ##34	KLHDC3 (ENSMMSG00000005069)
Bovidae	ANCESTRAL SPECIES	13	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000165752	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Caprinae	ANCESTRAL SPECIES	16	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000165752	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Goat	MODERN SPECIES	15	ENSCHIG00000017807 ##9	SLC29A1 (ENSCHIG00000022410) #10	CAPN11 (ENSCHIG00000010362) #11	ENSCHIG00000017964	TMEM63B (ENSCHIG00000010295) #12	MRPL14 (ENSCHIG00000016433) #13	VEGFA (ENSCHIG00000009242) #14	MRPS18A (ENSCHIG00000013039) #15	ENSCHIG00000006683	RSPH9 (ENSCHIG00000014085) #16	MAD2L1BP (ENSCHIG00000008563) #17	GTPBP2 (ENSCHIG00000011328) #18	POLH (ENSCHIG00000010328) #19	XPO5 (ENSCHIG00000011271) #20	POLR1C (ENSCHIG00000004352) #21	YIPF3 (ENSCHIG00000012623) #22	TJAP1 (ENSCHIG00000021772) #24	LRRC73 (ENSCHIG00000022549) #23	DLK2 (ENSCHIG00000005158) #25	ABCC10 (ENSCHIG00000016995) #28	ZNF318 (ENSCHIG00000003026) #29	CRIP3 (ENSCHIG00000016523) #30	SLC22A7 (ENSCHIG00000017192) #31	TTBK1 (ENSCHIG00000011661) #32	DNPH1 (ENSCHIG00000014711) #33	CUL9 (ENSCHIG00000014269) #34	SRF (ENSCHIG00000012065) #35	PTK7 (ENSCHIG00000019771) #36	KLC4 (ENSCHIG00000010669) #37	MRPL2 (ENSCHIG00000017416)	CUL7 (ENSCHIG00000015144) ##34
Rambouillet Sheep	MODERN SPECIES	12	HSP90AB1 (ENSOARG00020024426) ##9	SLC29A1 (ENSOARG00020024417) #10	MYMX (ENSOARG00020024406)	CAPN11 (ENSOARG00020024352) #11	TMEM63B (ENSOARG00020024328) #12	MRPL14 (ENSOARG00020024309) #13	VEGFA (ENSOARG00020022857) #14	ENSOARG00020022732	MRPS18A (ENSOARG00020022680) #15	RSPH9 (ENSOARG00020022645) #16	MAD2L1BP (ENSOARG00020022622) #17	GTPBP2 (ENSOARG00020022529) #18	POLH (ENSOARG00020022497) #19	XPO5 (ENSOARG00020022433) #20	POLR1C (ENSOARG00020022290) #21	YIPF3 (ENSOARG00020022197) #22	LRRC73 (ENSOARG00020022144) #23	TJAP1 (ENSOARG00020021973) #24	DLK2 (ENSOARG00020021941) #25	ABCC10 (ENSOARG00020021781) #28	ZNF318 (ENSOARG00020021662) #29	CRIP3 (ENSOARG00020021515) #30	SLC22A7 (ENSOARG00020021341) #31	TTBK1 (ENSOARG00020020989) #32	DNPH1 (ENSOARG00020020949) #33	CUL9 (ENSOARG00020019931) #34	SRF (ENSOARG00020019777) #35	KLC4 (ENSOARG00020019543) #37	MRPL2 (ENSOARG00020019391)	CUL7 (ENSOARG00020019219) ##34	RRP36 (ENSOARG00020019171)
Bovinae	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000165752	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216.d.b #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
American bison	MODERN SPECIES	3345	ENSBBBG00000009167 ##9	SLC29A1 (ENSBBBG00000019250) #10	MYMX (ENSBBBG00000019201)	CAPN11 (ENSBBBG00000004944) #11	ENSBBBG00000019176	TMEM63B (ENSBBBG00000019165) #12	MRPL14 (ENSBBBG00000019131) #13	VEGFA (ENSBBBG00000004895) #14	MRPS18A (ENSBBBG00000019022) #15	RSPH9 (ENSBBBG00000004846) #16	MAD2L1BP (ENSBBBG00000004843) #17	GTPBP2 (ENSBBBG00000004840) #18	POLH (ENSBBBG00000004824) #19	XPO5 (ENSBBBG00000018959) #20	POLR1C (ENSBBBG00000018932) #21	YIPF3 (ENSBBBG00000004770) #22	LRRC73 (ENSBBBG00000018869) #23	ENSBBBG00000018854	DLK2 (ENSBBBG00000018845) #25	ABCC10 (ENSBBBG00000018811) #28	ZNF318 (ENSBBBG00000004718) #29	CRIP3 (ENSBBBG00000004705) #30	SLC22A7 (ENSBBBG00000018739) #31	TTBK1 (ENSBBBG00000018712) #32	ENSBBBG00000018693 #33	CUL9 (ENSBBBG00000018662) #34	SRF (ENSBBBG00000018544) #35	PTK7 (ENSBBBG00000004566) #36	KLC4 (ENSBBBG00000018482) #37	MRPL2 (ENSBBBG00000018394)	ENSBBBG00000018349 ##34
Bos	ANCESTRAL SPECIES	17	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000165752	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216.d.b #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Bos_a	ANCESTRAL SPECIES	11	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000165752	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216.d.b #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Wild yak	MODERN SPECIES	1156	ENSBMUG00000011676 ##9	SLC29A1 (ENSBMUG00000011739) #10	MYMX (ENSBMUG00000011878)	CAPN11 (ENSBMUG00000011894) #11	ENSBMUG00000011908	TMEM63B (ENSBMUG00000011927) #12	MRPL14 (ENSBMUG00000011949) #13	ENSBMUG00000011996 #14	MRPS18A (ENSBMUG00000012027) #15	RSPH9 (ENSBMUG00000012049) #16	MAD2L1BP (ENSBMUG00000012054) #17	GTPBP2 (ENSBMUG00000012068) #18	POLH (ENSBMUG00000012084) #19	XPO5 (ENSBMUG00000012108) #20	POLR1C (ENSBMUG00000012129) #21	YIPF3 (ENSBMUG00000012145) #22	LRRC73 (ENSBMUG00000012153) #23	TJAP1 (ENSBMUG00000012199) #24	DLK2 (ENSBMUG00000012238) #25	ABCC10 (ENSBMUG00000012259) #28	ZNF318 (ENSBMUG00000012273) #29	CRIP3 (ENSBMUG00000012319) #30	SLC22A7 (ENSBMUG00000012334) #31	TTBK1 (ENSBMUG00000012411) #32	DNPH1 (ENSBMUG00000012524) #33	CUL9 (ENSBMUG00000012576) #34	SRF (ENSBMUG00000012595) #35	PTK7 (ENSBMUG00000012742) #36	KLC4 (ENSBMUG00000012876) #37	MRPL2 (ENSBMUG00000012933)	CUL7 (ENSBMUG00000012982) ##34
Domestic yak	MODERN SPECIES	16	SLC35B2 (ENSBGRG00000007502) #8	SLC29A1 (ENSBGRG00000007719) #10	MYMX (ENSBGRG00000008830)	ENSBGRG00000008841	TMEM63B (ENSBGRG00000008917) #12	ENSBGRG00000009756	ENSBGRG00000009813 #13	VEGFA (ENSBGRG00000010227) #14	ENSBGRG00000010432 #15	RSPH9 (ENSBGRG00000010763) #16	MAD2L1BP (ENSBGRG00000010868) #17	GTPBP2 (ENSBGRG00000011005) #18	POLH (ENSBGRG00000011380) #19	XPO5 (ENSBGRG00000011470) #20	POLR1C (ENSBGRG00000011968) #21	YIPF3 (ENSBGRG00000012257) #22	LRRC73 (ENSBGRG00000012584) #23	TJAP1 (ENSBGRG00000012682) #24	DLK2 (ENSBGRG00000012938) #25	ABCC10 (ENSBGRG00000012998) #28	ZNF318 (ENSBGRG00000013542) #29	CRIP3 (ENSBGRG00000013743) #30	SLC22A7 (ENSBGRG00000014004) #31	ENSBGRG00000014322 #32	ENSBGRG00000014485 #33	SRF (ENSBGRG00000018179) #35	PTK7 (ENSBGRG00000018313) #36	KLC4 (ENSBGRG00000019525) #37	MRPL2 (ENSBGRG00000019931)	CUL7 (ENSBGRG00000020196) ##34	RRP36 (ENSBGRG00000020475)
Bos_b	ANCESTRAL SPECIES	8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000165752	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216.d.b #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Cow	MODERN SPECIES	15	SLC29A1 (ENSBTAG00000015131) #10	MYMX (ENSBTAG00000049369)	ENSBTAG00000053551 #11	ENSBTAG00000050117	CAPN11 (ENSBTAG00000021066) #11	TMEM63B (ENSBTAG00000032680) #12	ENSBTAG00000050249	VEGFA (ENSBTAG00000005339) #14	MRPS18A (ENSBTAG00000025571) #15	RSPH9 (ENSBTAG00000009549) #16	MAD2L1BP (ENSBTAG00000009548) #17	GTPBP2 (ENSBTAG00000006016) #18	POLH (ENSBTAG00000006015) #19	XPO5 (ENSBTAG00000018970) #20	POLR1C (ENSBTAG00000018969) #21	YIPF3 (ENSBTAG00000018967) #22	LRRC73 (ENSBTAG00000025554) #23	TJAP1 (ENSBTAG00000011189) #24	DLK2 (ENSBTAG00000005850) #25	ABCC10 (ENSBTAG00000005842) #28	ZNF318 (ENSBTAG00000010217) #29	CRIP3 (ENSBTAG00000006357) #30	SLC22A7 (ENSBTAG00000006350) #31	TTBK1 (ENSBTAG00000046107) #32	DNPH1 (ENSBTAG00000019913) #33	CUL9 (ENSBTAG00000019908) #34	SRF (ENSBTAG00000012777) #35	PTK7 (ENSBTAG00000012761) #36	KLC4 (ENSBTAG00000012755) #37	MRPL2 (ENSBTAG00000012752)	CUL7 (ENSBTAG00000012749) ##34
Hybrid Bos Indicus	MODERN SPECIES	15	SLC35B2 (ENSBIXG00005028950) #8	ENSBIXG00005005101 ##9	SLC29A1 (ENSBIXG00005029077) #10	MYMX (ENSBIXG00005029092)	ENSBIXG00005001907	TMEM63B (ENSBIXG00005029176) #12	ENSBIXG00005029198 #13	VEGFA (ENSBIXG00005029350) #14	MRPS18A (ENSBIXG00005029321) #15	RSPH9 (ENSBIXG00005029313) #16	MAD2L1BP (ENSBIXG00005029309) #17	GTPBP2 (ENSBIXG00005029285) #18	POLH (ENSBIXG00005029268) #19	XPO5 (ENSBIXG00005000022) #20	POLR1C (ENSBIXG00005007888) #21	YIPF3 (ENSBIXG00005007907) #22	LRRC73 (ENSBIXG00005007915) #23	TJAP1 (ENSBIXG00005007955) #24	DLK2 (ENSBIXG00005007975) #25	ABCC10 (ENSBIXG00005007997) #28	ZNF318 (ENSBIXG00005008030) #29	CRIP3 (ENSBIXG00005008099) #30	SLC22A7 (ENSBIXG00005000127) #31	ENSBIXG00005008144 #33	ENSBIXG00005008153 #33	CUL9 (ENSBIXG00005008227) #34	SRF (ENSBIXG00005008263) #35	ENSBIXG00005008279	PTK7 (ENSBIXG00005008336) #36	KLC4 (ENSBIXG00005008424) #37	MRPL2 (ENSBIXG00005008468)
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Microbat	MODERN SPECIES	1255								VEGFA (ENSMLUG00000014519) #14	MRPS18A (ENSMLUG00000017755) #15	ENSMLUG00000017754 #16	MAD2L1BP (ENSMLUG00000016690) #17	GTPBP2 (ENSMLUG00000017753) #18	POLH (ENSMLUG00000003839) #19	XPO5 (ENSMLUG00000017752) #20	POLR1C (ENSMLUG00000017751) #21	YIPF3 (ENSMLUG00000017750) #22	LRRC73 (ENSMLUG00000017749) #23	TJAP1 (ENSMLUG00000026181) #24	DLK2 (ENSMLUG00000017748) #25	ABCC10 (ENSMLUG00000017747) #28	ZNF318 (ENSMLUG00000009010) #29	CRIP3 (ENSMLUG00000008998) #30	SLC22A7 (ENSMLUG00000008975) #31	TTBK1 (ENSMLUG00000008941) #32	CUL9 (ENSMLUG00000008847) #34	SRF (ENSMLUG00000008828) #35	PTK7 (ENSMLUG00000012218) #36	KLC4 (ENSMLUG00000012206) #37	MRPL2 (ENSMLUG00000012198)	CUL7 (ENSMLUG00000012163) ##34	KLHDC3 (ENSMLUG00000012143)
Greater horseshoe bat	MODERN SPECIES	21	SLC35B2 (ENSRFEG00010005829) #8	ENSRFEG00010005791 ##9	SLC29A1 (ENSRFEG00010005739) #10	MYMX (ENSRFEG00010005710)	CAPN11 (ENSRFEG00010005643) #11	TMEM63B (ENSRFEG00010005508) #12	MRPL14 (ENSRFEG00010005426) #13	ENSRFEG00010005409	VEGFA (ENSRFEG00010005317) #14	MRPS18A (ENSRFEG00010005273) #15	RSPH9 (ENSRFEG00010005257) #16	MAD2L1BP (ENSRFEG00010005237) #17	GTPBP2 (ENSRFEG00010005213) #18	POLH (ENSRFEG00010005154) #19	XPO5 (ENSRFEG00010005070) #20	YIPF3 (ENSRFEG00010005052) #22	POLR1C (ENSRFEG00010005036) #21	LRRC73 (ENSRFEG00010005019) #23	TJAP1 (ENSRFEG00010005002) #24	DLK2 (ENSRFEG00010004985) #25	ABCC10 (ENSRFEG00010004971) #28	ZNF318 (ENSRFEG00010004955) #29	CRIP3 (ENSRFEG00010004932) #30	SLC22A7 (ENSRFEG00010004909) #31	TTBK1 (ENSRFEG00010004875) #32	DNPH1 (ENSRFEG00010003593) #33	CUL9 (ENSRFEG00010003523) #34	SRF (ENSRFEG00010003481) #35	PTK7 (ENSRFEG00010003407) #36	KLC4 (ENSRFEG00010003303) #37	MRPL2 (ENSRFEG00010003195)
Megabat	MODERN SPECIES	333											MAD2L1BP (ENSPVAG00000005700) #17	GTPBP2 (ENSPVAG00000005698) #18	POLH (ENSPVAG00000005696) #19	XPO5 (ENSPVAG00000005691) #20	POLR1C (ENSPVAG00000005689) #21	YIPF3 (ENSPVAG00000005688) #22	LRRC73 (ENSPVAG00000005686) #23	TJAP1 (ENSPVAG00000005684) #24	DLK2 (ENSPVAG00000005683) #25	ABCC10 (ENSPVAG00000005677) #28
Equus	ANCESTRAL SPECIES	10	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Donkey	MODERN SPECIES	28	SLC35B2 (ENSEASG00005034890) #8	HSP90AB1 (ENSEASG00005003711) #9	SLC29A1 (ENSEASG00005003698) #10	MYMX (ENSEASG00005036007)	CAPN11 (ENSEASG00005003548) #11	TMEM63B (ENSEASG00005003502) #12	ENSEASG00005003494 #13	VEGFA (ENSEASG00005003487) #14	RSPH9 (ENSEASG00005003482) #16	MRPS18A (ENSEASG00005035068) #15	MAD2L1BP (ENSEASG00005003479) #17	GTPBP2 (ENSEASG00005003383) #18	POLH (ENSEASG00005003364) #19	XPO5 (ENSEASG00005003351) #20	POLR1C (ENSEASG00005003338) #21	YIPF3 (ENSEASG00005003330) #22	LRRC73 (ENSEASG00005003324) #23	TJAP1 (ENSEASG00005003315) #24	DLK2 (ENSEASG00005034606) #25	ABCC10 (ENSEASG00005003283) #28	CRIP3 (ENSEASG00005036888) #30	SLC22A7 (ENSEASG00005003255) #31	TTBK1 (ENSEASG00005003245) #32	DNPH1 (ENSEASG00005029866) #33	CUL9 (ENSEASG00005003226) #34	SRF (ENSEASG00005003218) #35	PTK7 (ENSEASG00005003204) #36	KLC4 (ENSEASG00005003191) #37	MRPL2 (ENSEASG00005003182)	CUL7 (ENSEASG00005003176) ##34	RRP36 (ENSEASG00005003169)
Horse	MODERN SPECIES	12	TMEM151B (ENSECAG00000000710)	NFKBIE (ENSECAG00000019914) #7	SLC35B2 (ENSECAG00000017860) #8	HSP90AB1 (ENSECAG00000008511) #9	SLC29A1 (ENSECAG00000008083) #10	CAPN11 (ENSECAG00000000758) #11	TMEM63B (ENSECAG00000013055) #12	MRPL14 (ENSECAG00000012726) #13	VEGFA (ENSECAG00000009402) #14	RSPH9 (ENSECAG00000000696) #16	MRPS18A (ENSECAG00000004870) #15	MAD2L1BP (ENSECAG00000025158) #17	GTPBP2 (ENSECAG00000024984) #18	POLH (ENSECAG00000024522) #19	XPO5 (ENSECAG00000032788) #20	YIPF3 (ENSECAG00000016807) #22	POLR1C (ENSECAG00000023516) #21	LRRC73 (ENSECAG00000015814) #23	TJAP1 (ENSECAG00000013159) #24	DLK2 (ENSECAG00000011919) #25	ABCC10 (ENSECAG00000005169) #28	ZNF318 (ENSECAG00000001119) #29	CRIP3 (ENSECAG00000017732) #30	SLC22A7 (ENSECAG00000008551) #31	TTBK1 (ENSECAG00000007438) #32	DNPH1 (ENSECAG00000006660) #33	CUL9 (ENSECAG00000011751) #34	SRF (ENSECAG00000009068) #35	PTK7 (ENSECAG00000011101) #36	KLC4 (ENSECAG00000022228) #37	MRPL2 (ENSECAG00000020273)
Carnivora	ANCESTRAL SPECIES	4	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Felidae	ANCESTRAL SPECIES	5	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Panthera	ANCESTRAL SPECIES	7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Tiger	MODERN SPECIES	220	SLC35B2 (ENSPTIG00000013686) #8	HSP90AB1 (ENSPTIG00000015152) #9	SLC29A1 (ENSPTIG00000017507) #10	MYMX (ENSPTIG00000006118)	CAPN11 (ENSPTIG00000019831) #11	TMEM63B (ENSPTIG00000005040) #12	MRPL14 (ENSPTIG00000019208) #13	ENSPTIG00000020469 #14	MRPS18A (ENSPTIG00000001653) #15	RSPH9 (ENSPTIG00000005598) #16	MAD2L1BP (ENSPTIG00000006700) #17	GTPBP2 (ENSPTIG00000007044) #18	POLH (ENSPTIG00000009782) #19	XPO5 (ENSPTIG00000011671) #20	POLR1C (ENSPTIG00000014813) #21	YIPF3 (ENSPTIG00000015815) #22	LRRC73 (ENSPTIG00000016671) #23	TJAP1 (ENSPTIG00000017372) #24	DLK2 (ENSPTIG00000018767) #25	ABCC10 (ENSPTIG00000019297) #28	ZNF318 (ENSPTIG00000009921) #29	CRIP3 (ENSPTIG00000011347) #30	SLC22A7 (ENSPTIG00000012865) #31	TTBK1 (ENSPTIG00000016224) #32	DNPH1 (ENSPTIG00000017589) #33	CUL9 (ENSPTIG00000018185) #34	SRF (ENSPTIG00000008482) #35	PTK7 (ENSPTIG00000009629) #36	KLC4 (ENSPTIG00000014698) #37	MRPL2 (ENSPTIG00000019266)	CUL7 (ENSPTIG00000020970) ##34
Panthera_a	ANCESTRAL SPECIES	4	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
leopard	MODERN SPECIES	30	SLC35B2 (ENSPPRG00000024707) #8	HSP90AB1 (ENSPPRG00000024108) #9	SLC29A1 (ENSPPRG00000023900) #10	MYMX (ENSPPRG00000014823)	CAPN11 (ENSPPRG00000023373) #11	TMEM63B (ENSPPRG00000000314) #12	MRPL14 (ENSPPRG00000000343) #13	VEGFA (ENSPPRG00000004713) #14	MRPS18A (ENSPPRG00000006429) #15	RSPH9 (ENSPPRG00000006715) #16	MAD2L1BP (ENSPPRG00000007127) #17	GTPBP2 (ENSPPRG00000007313) #18	POLH (ENSPPRG00000007763) #19	XPO5 (ENSPPRG00000009028) #20	POLR1C (ENSPPRG00000009760) #21	YIPF3 (ENSPPRG00000010151) #22	LRRC73 (ENSPPRG00000010283) #23	ENSPPRG00000010486 #24	ENSPPRG00000011131 #24	DLK2 (ENSPPRG00000011806) #25	ABCC10 (ENSPPRG00000012637) #28	ZNF318 (ENSPPRG00000014156) #29	CRIP3 (ENSPPRG00000020042) #30	SLC22A7 (ENSPPRG00000022671) #31	TTBK1 (ENSPPRG00000000583) #32	DNPH1 (ENSPPRG00000000794) #33	CUL9 (ENSPPRG00000003699) #34	SRF (ENSPPRG00000004209) #35	PTK7 (ENSPPRG00000008108) #36	KLC4 (ENSPPRG00000011006) #37	MRPL2 (ENSPPRG00000012024)
lion	MODERN SPECIES	5	SLC35B2 (ENSPLOG00000001133) #8	HSP90AB1 (ENSPLOG00000001099) #9	SLC29A1 (ENSPLOG00000001064) #10	MYMX (ENSPLOG00000001047)	CAPN11 (ENSPLOG00000000991) #11	TMEM63B (ENSPLOG00000000941) #12	MRPL14 (ENSPLOG00000000912) #13	VEGFA (ENSPLOG00000000793) #14	MRPS18A (ENSPLOG00000000703) #15	RSPH9 (ENSPLOG00000000669) #16	MAD2L1BP (ENSPLOG00000000642) #17	GTPBP2 (ENSPLOG00000000576) #18	POLH (ENSPLOG00000000519) #19	XPO5 (ENSPLOG00000000454) #20	POLR1C (ENSPLOG00000000371) #21	YIPF3 (ENSPLOG00000000311) #22	LRRC73 (ENSPLOG00000000285) #23	TJAP1 (ENSPLOG00000000250) #24	DLK2 (ENSPLOG00000004572) #25	ABCC10 (ENSPLOG00000004547) #28	ZNF318 (ENSPLOG00000004500) #29	CRIP3 (ENSPLOG00000004485) #30	SLC22A7 (ENSPLOG00000004471) #31	TTBK1 (ENSPLOG00000004440) #32	ENSPLOG00000004417 #33	CUL9 (ENSPLOG00000004400) #34	SRF (ENSPLOG00000004381) #35	PTK7 (ENSPLOG00000004352) #36	KLC4 (ENSPLOG00000004281) #37	MRPL2 (ENSPLOG00000004216)	CUL7 (ENSPLOG00000004140) ##34
Cat	MODERN SPECIES	236	SLC35B2 (ENSFCAG00000038971) #8	ENSFCAG00000009764 ##9	MYMX (ENSFCAG00000042737)	CAPN11 (ENSFCAG00000009759) #11	TMEM63B (ENSFCAG00000009756) #12	MRPL14 (ENSFCAG00000009755) #13	ENSFCAG00000037864	VEGFA (ENSFCAG00000026462) #14	MRPS18A (ENSFCAG00000036031) #15	RSPH9 (ENSFCAG00000009746) #16	MAD2L1BP (ENSFCAG00000009744) #17	GTPBP2 (ENSFCAG00000009742) #18	POLH (ENSFCAG00000009740) #19	XPO5 (ENSFCAG00000009737) #20	POLR1C (ENSFCAG00000009735) #21	YIPF3 (ENSFCAG00000009731) #22	LRRC73 (ENSFCAG00000033302) #23	DLK2 (ENSFCAG00000030746) #25	ABCC10 (ENSFCAG00000009727) #28	ZNF318 (ENSFCAG00000009726) #29	CRIP3 (ENSFCAG00000009725) #30	SLC22A7 (ENSFCAG00000009724) #31	TTBK1 (ENSFCAG00000009723) #32	DNPH1 (ENSFCAG00000009722) #33	CUL9 (ENSFCAG00000009721) #34	SRF (ENSFCAG00000025180) #35	PTK7 (ENSFCAG00000009719) #36	KLC4 (ENSFCAG00000009718) #37	MRPL2 (ENSFCAG00000028089)	CUL7 (ENSFCAG00000009717) ##34	RRP36 (ENSFCAG00000043818)
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Ursidae	ANCESTRAL SPECIES	35	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Ursus	ANCESTRAL SPECIES	28	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Polar bear	MODERN SPECIES	174	SLC35B2 (ENSUMAG00000005353) #8	SLC29A1 (ENSUMAG00000005359) #10	MYMX (ENSUMAG00000005365)	CAPN11 (ENSUMAG00000005384) #11	TMEM63B (ENSUMAG00000005638) #12	MRPL14 (ENSUMAG00000005898) #13	ENSUMAG00000005907 #14	MRPS18A (ENSUMAG00000005910) #15	RSPH9 (ENSUMAG00000005912) #16	MAD2L1BP (ENSUMAG00000005918) #17	ENSUMAG00000005920 #18	POLH (ENSUMAG00000005923) #19	XPO5 (ENSUMAG00000005928) #20	POLR1C (ENSUMAG00000005938) #21	ENSUMAG00000005941	YIPF3 (ENSUMAG00000005949) #22	LRRC73 (ENSUMAG00000005952) #23	TJAP1 (ENSUMAG00000005956) #24	DLK2 (ENSUMAG00000005958) #25	ABCC10 (ENSUMAG00000005978) #28	ZNF318 (ENSUMAG00000006092) #29	CRIP3 (ENSUMAG00000006105) #30	SLC22A7 (ENSUMAG00000006113) #31	ENSUMAG00000006123 #32	DNPH1 (ENSUMAG00000006141) #33	CUL9 (ENSUMAG00000006362) #34	SRF (ENSUMAG00000008409) #35	PTK7 (ENSUMAG00000008520) #36	KLC4 (ENSUMAG00000008716) #37	MRPL2 (ENSUMAG00000008717)	ENSUMAG00000008719 ##34
American black bear	MODERN SPECIES	2037												ENSUAMG00000025609 #19	ENSUAMG00000025608 #20	ENSUAMG00000025603 #20	POLR1C (ENSUAMG00000025602) #21	YIPF3 (ENSUAMG00000025601) #22	LRRC73 (ENSUAMG00000025600) #23	TJAP1 (ENSUAMG00000025599) #24	DLK2 (ENSUAMG00000025597) #25	ABCC10 (ENSUAMG00000025596) #28
Giant Panda	MODERN SPECIES	10	SLC35B2 (ENSAMEG00000023493) #8	ENSAMEG00000011809 ##9	SLC29A1 (ENSAMEG00000011849) #10	MYMX (ENSAMEG00000019314)	CAPN11 (ENSAMEG00000011874) #11	TMEM63B (ENSAMEG00000012014) #12	MRPL14 (ENSAMEG00000012068) #13	VEGFA (ENSAMEG00000027031) #14	MRPS18A (ENSAMEG00000012117) #15	RSPH9 (ENSAMEG00000012125) #16	MAD2L1BP (ENSAMEG00000030881) #17	GTPBP2 (ENSAMEG00000012148) #18	POLH (ENSAMEG00000012174) #19	XPO5 (ENSAMEG00000012197) #20	POLR1C (ENSAMEG00000012205) #21	YIPF3 (ENSAMEG00000012224) #22	LRRC73 (ENSAMEG00000012262) #23	TJAP1 (ENSAMEG00000029348) #24	DLK2 (ENSAMEG00000012279) #25	ABCC10 (ENSAMEG00000012285) #28	ZNF318 (ENSAMEG00000012073) #29	CRIP3 (ENSAMEG00000012312) #30	SLC22A7 (ENSAMEG00000012335) #31	TTBK1 (ENSAMEG00000012383) #32	DNPH1 (ENSAMEG00000012390) #33	CUL9 (ENSAMEG00000012395) #34	SRF (ENSAMEG00000031186) #35	PTK7 (ENSAMEG00000012469) #36	KLC4 (ENSAMEG00000012512) #37	MRPL2 (ENSAMEG00000012573)	CUL7 (ENSAMEG00000012585) ##34
Mustelinae	ANCESTRAL SPECIES	8	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
American mink	MODERN SPECIES	50	SLC35B2 (ENSNVIG00000009456) #8	SLC29A1 (ENSNVIG00000009505) #10	MYMX (ENSNVIG00000009592)	CAPN11 (ENSNVIG00000009603) #11	TMEM63B (ENSNVIG00000009636) #12	MRPL14 (ENSNVIG00000009675) #13	VEGFA (ENSNVIG00000009743) #14	MRPS18A (ENSNVIG00000010007) #15	RSPH9 (ENSNVIG00000010032) #16	MAD2L1BP (ENSNVIG00000010045) #17	ENSNVIG00000010051	GTPBP2 (ENSNVIG00000010057) #18	POLH (ENSNVIG00000010078) #19	XPO5 (ENSNVIG00000010082) #20	POLR1C (ENSNVIG00000010123) #21	YIPF3 (ENSNVIG00000010157) #22	LRRC73 (ENSNVIG00000010186) #23	TJAP1 (ENSNVIG00000010205) #24	DLK2 (ENSNVIG00000010255) #25	ABCC10 (ENSNVIG00000010266) #28	ENSNVIG00000010313	ZNF318 (ENSNVIG00000010318) #29	CRIP3 (ENSNVIG00000010347) #30	SLC22A7 (ENSNVIG00000010392) #31	TTBK1 (ENSNVIG00000010429) #32	DNPH1 (ENSNVIG00000010495) #33	CUL9 (ENSNVIG00000010520) #34	SRF (ENSNVIG00000011434) #35	PTK7 (ENSNVIG00000011458) #36	KLC4 (ENSNVIG00000011605) #37	MRPL2 (ENSNVIG00000011714)
Ferret	MODERN SPECIES	166	SLC29A1 (ENSMPUG00000012621) #10	CAPN11 (ENSMPUG00000012627) #11	TMEM63B (ENSMPUG00000012791) #12	MRPL14 (ENSMPUG00000012804) #13	ENSMPUG00000018840	ENSMPUG00000012812	VEGFA (ENSMPUG00000012815) #14	MRPS18A (ENSMPUG00000012868) #15	RSPH9 (ENSMPUG00000012871) #16	MAD2L1BP (ENSMPUG00000012889) #17	GTPBP2 (ENSMPUG00000012898) #18	POLH (ENSMPUG00000012900) #19	ENSMPUG00000012904 #20	ENSMPUG00000012910 #20	POLR1C (ENSMPUG00000012916) #21	YIPF3 (ENSMPUG00000012921) #22	LRRC73 (ENSMPUG00000012974) #23	TJAP1 (ENSMPUG00000012969) #24	DLK2 (ENSMPUG00000013001) #25	ABCC10 (ENSMPUG00000012993) #28	ENSMPUG00000013012	ENSMPUG00000018843	ZNF318 (ENSMPUG00000013027) #29	CRIP3 (ENSMPUG00000013043) #30	SLC22A7 (ENSMPUG00000013035) #31	TTBK1 (ENSMPUG00000013048) #32	CUL9 (ENSMPUG00000013074) #34	SRF (ENSMPUG00000013090) #35	PTK7 (ENSMPUG00000013097) #36	KLC4 (ENSMPUG00000013106) #37	CUL7 (ENSMPUG00000013115) ##34
Canidae	ANCESTRAL SPECIES	6	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493.i #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34	ENSGT00530000064271
Red fox	MODERN SPECIES	7	SLC35B2 (ENSVVUG00000029223) #8	ENSVVUG00000029141 ##9	SLC29A1 (ENSVVUG00000029123) #10	MYMX (ENSVVUG00000029121)	CAPN11 (ENSVVUG00000029116) #11	TMEM63B (ENSVVUG00000029109) #12	MRPL14 (ENSVVUG00000029108) #13	VEGFA (ENSVVUG00000029100) #14	MRPS18A (ENSVVUG00000029092) #15	RSPH9 (ENSVVUG00000029090) #16	MAD2L1BP (ENSVVUG00000029089) #17	GTPBP2 (ENSVVUG00000029087) #18	POLH (ENSVVUG00000029086) #19	XPO5 (ENSVVUG00000028952) #20	POLR1C (ENSVVUG00000028922) #21	YIPF3 (ENSVVUG00000028909) #22	LRRC73 (ENSVVUG00000028906) #23	TJAP1 (ENSVVUG00000028902) #24	DLK2 (ENSVVUG00000028897) #25	ABCC10 (ENSVVUG00000028864) #28	ZNF318 (ENSVVUG00000028861) #29	CRIP3 (ENSVVUG00000028856) #30	TTBK1 (ENSVVUG00000028855) #32	CUL9 (ENSVVUG00000028747) #34	SRF (ENSVVUG00000028693) #35	PTK7 (ENSVVUG00000028602) #36	KLC4 (ENSVVUG00000028214) #37	MRPL2 (ENSVVUG00000028143)	CUL7 (ENSVVUG00000027838) ##34	RRP36 (ENSVVUG00000027816)	KLHDC3 (ENSVVUG00000027805)
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493.i #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A.d #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34	ENSGT00530000064271
Dog	MODERN SPECIES	3	SLC35B2 (ENSCAFG00845011652) #8	ENSCAFG00845011600 #9	SLC29A1 (ENSCAFG00845011282) #10	MYMX (ENSCAFG00845011194)	CAPN11 (ENSCAFG00845011002) #11	TMEM63B (ENSCAFG00845010814) #12	MRPL14 (ENSCAFG00845010714) #13	VEGFA (ENSCAFG00845010533) #14	MRPS18A (ENSCAFG00845010419) #15	RSPH9 (ENSCAFG00845010362) #16	MAD2L1BP (ENSCAFG00845010340) #17	GTPBP2 (ENSCAFG00845010282) #18	POLH (ENSCAFG00845010148) #19	XPO5 (ENSCAFG00845009741) #20	POLR1C (ENSCAFG00845009541) #21	YIPF3 (ENSCAFG00845009430) #22	LRRC73 (ENSCAFG00845009293) #23	TJAP1 (ENSCAFG00845009226) #24	DLK2 (ENSCAFG00845009184) #25	ABCC10 (ENSCAFG00845009128) #28	ZNF318 (ENSCAFG00845009007) #29	CRIP3 (ENSCAFG00845008907) #30	TTBK1 (ENSCAFG00845008729) #32	DNPH1 (ENSCAFG00845008662) #33	CUL9 (ENSCAFG00845008524) #34	SRF (ENSCAFG00845008446) #35	PTK7 (ENSCAFG00845008248) #36	KLC4 (ENSCAFG00845007804) #37	MRPL2 (ENSCAFG00845007665)	CUL7 (ENSCAFG00845007591) ##34	KLHDC3 (ENSCAFG00845007294)
Dingo	DUPLICATION
Dingo	MODERN SPECIES	276	SLC29A1 (ENSCAFG00020012121) #10	MYMX (ENSCAFG00020012114)	ENSCAFG00020012105 #11	ENSCAFG00020012093 #11	TMEM63B (ENSCAFG00020012080) #12	MRPL14 (ENSCAFG00020012077) #13	VEGFA (ENSCAFG00020012066) #14	MRPS18A (ENSCAFG00020012064) #15	RSPH9 (ENSCAFG00020012059) #16	MAD2L1BP (ENSCAFG00020012055) #17	GTPBP2 (ENSCAFG00020012050) #18	POLH (ENSCAFG00020012045) #19	ENSCAFG00020012040 #20	ENSCAFG00020012020 #20	POLR1C (ENSCAFG00020012018) #21	ENSCAFG00020012005 #22	ENSCAFG00020011999 #23	ENSCAFG00020011996 #24	DLK2 (ENSCAFG00020011986) #25	ENSCAFG00020011962 #28	ZNF318 (ENSCAFG00020011950) #29	CRIP3 (ENSCAFG00020011945) #30	TTBK1 (ENSCAFG00020011920) #32	DNPH1 (ENSCAFG00020011915) #33	CUL9 (ENSCAFG00020011438) #34	SRF (ENSCAFG00020011367) #35	PTK7 (ENSCAFG00020011360) #36	KLC4 (ENSCAFG00020011139) #37	MRPL2 (ENSCAFG00020011096)	CUL7 (ENSCAFG00020011080) ##34	RRP36 (ENSCAFG00020011057)
Dingo	MODERN SPECIES	272																ENSCAFG00020010874 #22	ENSCAFG00020010863 #23	ENSCAFG00020010848 #24	ENSCAFG00020010844 #28
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000153766.A #22
Hedgehog	MODERN SPECIES	3451																YIPF3 (ENSEEUG00000012721) #22
Common shrew	MODERN SPECIES	2594															XPO5 (ENSSARG00000001349) #20	YIPF3 (ENSSARG00000001336) #22	ENSSARG00000001312 #24
Atlantogenata	ANCESTRAL SPECIES	3	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Xenarthra	ANCESTRAL SPECIES	231								ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32
Armadillo	MODERN SPECIES	3031								VEGFA (ENSDNOG00000039695) #14	MRPS18A (ENSDNOG00000035755) #15	RSPH9 (ENSDNOG00000007094) #16	MAD2L1BP (ENSDNOG00000032600) #17	GTPBP2 (ENSDNOG00000037272) #18	POLH (ENSDNOG00000047483) #19	XPO5 (ENSDNOG00000009443) #20	POLR1C (ENSDNOG00000042693) #21	YIPF3 (ENSDNOG00000034003) #22	LRRC73 (ENSDNOG00000009434) #23	ENSDNOG00000036766 #24	ABCC10 (ENSDNOG00000010523) #28	ZNF318 (ENSDNOG00000031395) #29	CRIP3 (ENSDNOG00000044010) #30	SLC22A7 (ENSDNOG00000031145) #31	TTBK1 (ENSDNOG00000044367) #32
Afrotheria	ANCESTRAL SPECIES	24	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Tenrec	MODERN SPECIES	8397												POLH (ENSETEG00000010819) #19	GTPBP2 (ENSETEG00000010814) #18	XPO5 (ENSETEG00000010810) #20	POLR1C (ENSETEG00000010807) #21	YIPF3 (ENSETEG00000010804) #22	LRRC73 (ENSETEG00000010799) #23
Afrotheria_a	ANCESTRAL SPECIES	23	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.a.a #9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00490000044373	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.e #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.f ##34
Hyrax	MODERN SPECIES	2715													GTPBP2 (ENSPCAG00000005341) #18	POLH (ENSPCAG00000005241) #19	XPO5 (ENSPCAG00000005038) #20	YIPF3 (ENSPCAG00000004973) #22	LRRC73 (ENSPCAG00000004927) #23	TJAP1 (ENSPCAG00000004887) #24
Elephant	MODERN SPECIES	1	HSP90AB1 (ENSLAFG00000028485) #9	SLC29A1 (ENSLAFG00000010303) #10	MYMX (ENSLAFG00000027922)	ENSLAFG00000028863 #11	ENSLAFG00000027870 #11	TMEM63B (ENSLAFG00000015940) #12	MRPL14 (ENSLAFG00000015932) #13	VEGFA (ENSLAFG00000032226) #14	MRPS18A (ENSLAFG00000001168) #15	RSPH9 (ENSLAFG00000001166) #16	MAD2L1BP (ENSLAFG00000025941) #17	GTPBP2 (ENSLAFG00000022990) #18	POLH (ENSLAFG00000000571) #19	XPO5 (ENSLAFG00000000567) #20	POLR1C (ENSLAFG00000026248) #21	YIPF3 (ENSLAFG00000000565) #22	LRRC73 (ENSLAFG00000017215) #23	TJAP1 (ENSLAFG00000017208) #24	DLK2 (ENSLAFG00000003181) #25	ABCC10 (ENSLAFG00000003182) #28	ZNF318 (ENSLAFG00000006589) #29	ENSLAFG00000006584 #30	ENSLAFG00000027999 #31	TTBK1 (ENSLAFG00000017449) #32	DNPH1 (ENSLAFG00000010299) #33	CUL9 (ENSLAFG00000010286) #34	SRF (ENSLAFG00000010278) #35	PTK7 (ENSLAFG00000017257) #36	KLC4 (ENSLAFG00000022928) #37	MRPL2 (ENSLAFG00000017251)	CUL7 (ENSLAFG00000017234) ##34
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00390000013762.b.a	ENSGT00940000159120 #7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000161082 #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.g #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.h #34
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00390000013762.b.a	ENSGT00940000159120 #7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000161082.g #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.g #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.h #34
Diprotodontia	ANCESTRAL SPECIES	37	ENSGT00390000013762.b.a	ENSGT00940000159120 #7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b.e #10	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000161082.g #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.g #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.h #34
Diprotodontia_a	ANCESTRAL SPECIES	36	ENSGT00390000013762.b.a	ENSGT00940000159120 #7	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b.e #10	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000161082.g #28	ENSGT00390000000614 #29	ENSGT00940000161321 #30	ENSGT00940000154922.b #31	ENSGT00940000160981 #32	ENSGT00390000001216 #33	ENSGT00940000153954.g #34	ENSGT00400000022158 #35	ENSGT00940000157908 #36	ENSGT00940000161323 #37	ENSGT00940000153244.A	ENSGT00940000153954.h #34
koala	MODERN SPECIES	301								VEGFA (ENSPCIG00000004426) #14	MRPS18A (ENSPCIG00000024858) #15	RSPH9 (ENSPCIG00000024854) #16	MAD2L1BP (ENSPCIG00000028516) #17	GTPBP2 (ENSPCIG00000028513) #18	POLH (ENSPCIG00000028510) #19	XPO5 (ENSPCIG00000028142) #20	POLR1C (ENSPCIG00000028137) #21	YIPF3 (ENSPCIG00000028134) #22	LRRC73 (ENSPCIG00000028132) #23	ENSPCIG00000028130	DLK2 (ENSPCIG00000028126) #25	ENSPCIG00000031242 #28	ENSPCIG00000028124 #28	ZNF318 (ENSPCIG00000028122) #29	CRIP3 (ENSPCIG00000028120) #30	SLC22A7 (ENSPCIG00000028118) #31	ENSPCIG00000030687 #33	TTBK1 (ENSPCIG00000028115) #32	ENSPCIG00000027657 #34	SRF (ENSPCIG00000034256) #35	PTK7 (ENSPCIG00000028200) #36	KLC4 (ENSPCIG00000028199) #37	MRPL2 (ENSPCIG00000028198)
Common wonbat	MODERN SPECIES	1061	TCTE1 (ENSVURG00010004721)	TMEM151B (ENSVURG00010004729)	NFKBIE (ENSVURG00010004736) #7	SLC35B2 (ENSVURG00010004750) #8	ENSVURG00010004773 ##9	SLC29A1 (ENSVURG00010004838) #10	TMEM63B (ENSVURG00010004884) #12	MRPL14 (ENSVURG00010004920) #13	VEGFA (ENSVURG00010004952) #14	RSPH9 (ENSVURG00010005039) #16	MAD2L1BP (ENSVURG00010005048) #17	GTPBP2 (ENSVURG00010005065) #18	POLH (ENSVURG00010005103) #19	XPO5 (ENSVURG00010005144) #20	POLR1C (ENSVURG00010005191) #21	YIPF3 (ENSVURG00010005213) #22	LRRC73 (ENSVURG00010005229) #23	ENSVURG00010005241	DLK2 (ENSVURG00010005262) #25	ABCC10 (ENSVURG00010005277) #28	ZNF318 (ENSVURG00010005303) #29	CRIP3 (ENSVURG00010005334) #30	SLC22A7 (ENSVURG00010005350) #31	ENSVURG00010005373 #32	DNPH1 (ENSVURG00010005393) #33	ENSVURG00010005541 #34	SRF (ENSVURG00010005986) #35	PTK7 (ENSVURG00010006011) #36	KLC4 (ENSVURG00010006197) #37	MRPL2 (ENSVURG00010006236)	ENSVURG00010006264 #34
Wallaby	MODERN SPECIES	4385														XPO5 (ENSMEUG00000006794) #20	POLR1C (ENSMEUG00000006778) #21	YIPF3 (ENSMEUG00000006760) #22
Tasmanian devil	MODERN SPECIES	3	NFKBIE (ENSSHAG00000021391) #7	TMEM151B (ENSSHAG00000024559)	SLC35B2 (ENSSHAG00000023658) #8	ENSSHAG00000017428 ##9	SLC29A1 (ENSSHAG00000017372) #10	TMEM63B (ENSSHAG00000017114) #12	MRPL14 (ENSSHAG00000001453) #13	ENSSHAG00000015515 #14	MRPS18A (ENSSHAG00000030116) #15	RSPH9 (ENSSHAG00000014967) #16	MAD2L1BP (ENSSHAG00000030158) #17	GTPBP2 (ENSSHAG00000024911) #18	POLH (ENSSHAG00000014751) #19	XPO5 (ENSSHAG00000014472) #20	POLR1C (ENSSHAG00000014456) #21	YIPF3 (ENSSHAG00000014415) #22	LRRC73 (ENSSHAG00000023876) #23	ENSSHAG00000020933	DLK2 (ENSSHAG00000014178) #25	ABCC10 (ENSSHAG00000014014) #28	ZNF318 (ENSSHAG00000013823) #29	CRIP3 (ENSSHAG00000013569) #30	SLC22A7 (ENSSHAG00000013527) #31	TTBK1 (ENSSHAG00000013135) #32	DNPH1 (ENSSHAG00000029523) #33	ENSSHAG00000012816 #34	SRF (ENSSHAG00000031032) #35	PTK7 (ENSSHAG00000012466) #36	MRPL2 (ENSSHAG00000012091)	KLC4 (ENSSHAG00000012140) #37	ENSSHAG00000027243 #34
Opossum	MODERN SPECIES	1	SLC35B2 (ENSMODG00000018930) #8	ENSMODG00000018933 ##9	ENSMODG00000018935 #10	TMEM63B (ENSMODG00000018941) #12	MRPL14 (ENSMODG00000018945) #13	ENSMODG00000025685	VEGFA (ENSMODG00000018950) #14	MRPS18A (ENSMODG00000018952) #15	ENSMODG00000038008	RSPH9 (ENSMODG00000018954) #16	MAD2L1BP (ENSMODG00000018956) #17	GTPBP2 (ENSMODG00000018959) #18	POLH (ENSMODG00000018961) #19	XPO5 (ENSMODG00000018963) #20	POLR1C (ENSMODG00000018964) #21	YIPF3 (ENSMODG00000018967) #22	LRRC73 (ENSMODG00000018969) #23	TJAP1 (ENSMODG00000038004)	DLK2 (ENSMODG00000018972) #25	ABCC10 (ENSMODG00000018973) #28	ZNF318 (ENSMODG00000018974) #29	CRIP3 (ENSMODG00000018977) #30	SLC22A7 (ENSMODG00000018975) #31	ENSMODG00000018978 #32	DNPH1 (ENSMODG00000018979) #33	ENSMODG00000018980 #34	SRF (ENSMODG00000018981) #35	PTK7 (ENSMODG00000018983) #36	KLC4 (ENSMODG00000018988) #37	MRPL2 (ENSMODG00000018989)	ENSMODG00000018990 #34
Platypus	MODERN SPECIES	10	NFKBIE (ENSOANG00000048935) #7	SLC35B2 (ENSOANG00000047499) #8	ENSOANG00000048138 ##9	SLC29A1 (ENSOANG00000007211) #10	CAPN11 (ENSOANG00000009824) #11	TMEM63B (ENSOANG00000049821) #12	MRPL14 (ENSOANG00000012556) #13	ENSOANG00000044033 #14	MRPS18A (ENSOANG00000043266) #15	RSPH9 (ENSOANG00000001956) #16	MAD2L1BP (ENSOANG00000001957) #17	GTPBP2 (ENSOANG00000037369) #18	POLH (ENSOANG00000041331) #19	XPO5 (ENSOANG00000012106) #20	POLR1C (ENSOANG00000003043) #21	YIPF3 (ENSOANG00000045097) #22	LRRC73 (ENSOANG00000043842) #23	ENSOANG00000051088	DLK2 (ENSOANG00000044569) #25	ABCC10 (ENSOANG00000003601) #28	ENSOANG00000005203 #29	CRIP3 (ENSOANG00000007234) #30	SLC22A7 (ENSOANG00000007235) #31	TTBK1 (ENSOANG00000014492) #32	ENSOANG00000002285 #34	SRF (ENSOANG00000046298) #35	PTK7 (ENSOANG00000008446) #36	KLC4 (ENSOANG00000008447) #37	MRPL2 (ENSOANG00000008451)	ENSOANG00000008452 #34	ENSOANG00000050999
Sauria	ANCESTRAL SPECIES	1	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000175262	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00900000143268	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a
Archelosauria	ANCESTRAL SPECIES	1	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000175262	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00900000143268	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a
Archosauria	ANCESTRAL SPECIES	3	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000175262	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00900000143268	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a
Aves	ANCESTRAL SPECIES	12	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000175262	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00900000143268	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a
Neognathae	ANCESTRAL SPECIES	2	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000175262	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00900000143268	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Neognathae_c	ANCESTRAL SPECIES	5	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Kakapo	MODERN SPECIES	2	SLC35B2 (ENSSHBG00005014749) #8	HSP90AB1 (ENSSHBG00005014736) ##9	SLC29A1 (ENSSHBG00005014731) #10	CAPN11 (ENSSHBG00005014708) #11	TMEM63B (ENSSHBG00005014680) #12	MRPL14 (ENSSHBG00005014668) #13	VEGFA (ENSSHBG00005014659) #14	MRPS18A (ENSSHBG00005014654) #15	RSPH9 (ENSSHBG00005014647) #16	ENSSHBG00005014638	MAD2L1BP (ENSSHBG00005014623) #17	GTPBP2 (ENSSHBG00005014597) #18	POLH (ENSSHBG00005014580) #19	XPO5 (ENSSHBG00005014565) #20	POLR1C (ENSSHBG00005014540) #21	YIPF3 (ENSSHBG00005014530) #22	LRRC73 (ENSSHBG00005014520) #23	ENSSHBG00005014511	DLK2 (ENSSHBG00005014499) #25	ENSSHBG00005014480	ZNF318 (ENSSHBG00005014455) #29	FAM98A (ENSSHBG00005014442)	RASGRP3 (ENSSHBG00005014292)	LTBP1 (ENSSHBG00005008823)	TTC27 (ENSSHBG00005008683)	BIRC6 (ENSSHBG00005008645)	YIPF4 (ENSSHBG00005008611)	CDC42EP3 (ENSSHBG00005008604)	ENSSHBG00005008600	CYP1B1 (ENSSHBG00005008591)	NANP (ENSSHBG00005008587)
Golden eagle	MODERN SPECIES	4	NFKBIE (ENSACCG00020011172) #7	SLC35B2 (ENSACCG00020011178) #8	HSP90AB1 (ENSACCG00020011199) ##9	CAPN11 (ENSACCG00020011220) #11	TMEM63B (ENSACCG00020011246) #12	MRPL14 (ENSACCG00020011271) #13	VEGFA (ENSACCG00020005257) #14	MRPS18A (ENSACCG00020005293) #15	RSPH9 (ENSACCG00020005305) #16	ENSACCG00020005317	MAD2L1BP (ENSACCG00020005329) #17	GTPBP2 (ENSACCG00020005334) #18	POLH (ENSACCG00020005375) #19	XPO5 (ENSACCG00020005466) #20	POLR1C (ENSACCG00020005565) #21	YIPF3 (ENSACCG00020005591) #22	LRRC73 (ENSACCG00020005615) #23	ENSACCG00020005643	DLK2 (ENSACCG00020005660) #25	ENSACCG00020005692	ZNF318 (ENSACCG00020005716) #29	FAM98A (ENSACCG00020005757)	RASGRP3 (ENSACCG00020005971)	LTBP1 (ENSACCG00020006465)	TTC27 (ENSACCG00020006876)	BIRC6 (ENSACCG00020007337)	YIPF4 (ENSACCG00020007785)	NLRC4 (ENSACCG00020007809)	CDC42EP3 (ENSACCG00020007817)	RMDN2 (ENSACCG00020007831)	CYP1B1 (ENSACCG00020007875)
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00390000018525.a.a	ENSGT00940000157912	ENSGT00940000156543	ENSGT00940000155310.b	ENSGT00940000157330	ENSGT00390000011034	ENSGT00950000182836.b.b.b.b	ENSGT00880000138034	ENSGT00940000155208.u.b.b	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a	ENSGT00390000003094
Great tit	MODERN SPECIES	22	TBXT (ENSPMJG00000001409)	PDE10A (ENSPMJG00000001349)	QKI (ENSPMJG00000001265)	PACRG (ENSPMJG00000001232)	PRKN (ENSPMJG00000001036)	AGPAT4 (ENSPMJG00000000867)	MAP3K4 (ENSPMJG00000000617)	ENSPMJG00000000606	ENSPMJG00000000596	ENSPMJG00000000582	MAD2L1BP (ENSPMJG00000000572) #17	GTPBP2 (ENSPMJG00000000553) #18	POLH (ENSPMJG00000000538) #19	XPO5 (ENSPMJG00000000397) #20	POLR1C (ENSPMJG00000000376) #21	YIPF3 (ENSPMJG00000000350) #22	LRRC73 (ENSPMJG00000000341) #23	ENSPMJG00000000325	DLK2 (ENSPMJG00000000211) #25	ENSPMJG00000000117	ZNF318 (ENSPMJG00000000093) #29	FAM98A (ENSPMJG00000000067)	RASGRP3 (ENSPMJG00000015611)	LTBP1 (ENSPMJG00000015609)	TTC27 (ENSPMJG00000015606)	BIRC6 (ENSPMJG00000015182)	YIPF4 (ENSPMJG00000015181)	CDC42EP3 (ENSPMJG00000015180)	RMDN2 (ENSPMJG00000015178)	CYP1B1 (ENSPMJG00000015177)	NANP (ENSPMJG00000015175)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00390000018525.a.a	ENSGT00940000157912	ENSGT00940000156543	ENSGT00940000155310.b	ENSGT00940000157330	ENSGT00390000011034	ENSGT00950000182836.b.b.b.b	ENSGT00880000138034	ENSGT00940000155208.u.b.b	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a	ENSGT00390000003094
Flycatcher	MODERN SPECIES	21	MPC1 (ENSFALG00000029027)	SFT2D1 (ENSFALG00000012238)	TBXT (ENSFALG00000012218)	PDE10A (ENSFALG00000012196)	QKI (ENSFALG00000012183)	PACRG (ENSFALG00000028276)	PRKN (ENSFALG00000012173)	AGPAT4 (ENSFALG00000012170)	MAP3K4 (ENSFALG00000012168)	ENSFALG00000012162	MAD2L1BP (ENSFALG00000012156) #17	GTPBP2 (ENSFALG00000012153) #18	POLH (ENSFALG00000012144) #19	XPO5 (ENSFALG00000012130) #20	POLR1C (ENSFALG00000012111) #21	YIPF3 (ENSFALG00000012092) #22	LRRC73 (ENSFALG00000012083) #23	ENSFALG00000012158	ENSFALG00000012070	DLK2 (ENSFALG00000028588) #25	ENSFALG00000012056	ZNF318 (ENSFALG00000012050) #29	FAM98A (ENSFALG00000012034)	RASGRP3 (ENSFALG00000012022)	LTBP1 (ENSFALG00000012012)	TTC27 (ENSFALG00000011986)	BIRC6 (ENSFALG00000011954)	YIPF4 (ENSFALG00000024112)	CDC42EP3 (ENSFALG00000015279)	ENSFALG00000011921	CYP1B1 (ENSFALG00000027315)
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00390000018525.a.a	ENSGT00940000157912	ENSGT00940000156543	ENSGT00940000155310.b	ENSGT00940000157330	ENSGT00390000011034	ENSGT00950000182836.b.b.b.b	ENSGT00880000138034	ENSGT00940000155208.u.b.b	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a	ENSGT00390000003094
Medium ground finch	MODERN SPECIES	2	MPC1 (ENSGFOG00000001931)	SFT2D1 (ENSGFOG00000001923)	TBXT (ENSGFOG00000001906)	PDE10A (ENSGFOG00000001765)	QKI (ENSGFOG00000001715)	PACRG (ENSGFOG00000001701)	PRKN (ENSGFOG00000001685)	AGPAT4 (ENSGFOG00000001673)	MAP3K4 (ENSGFOG00000001636)	ENSGFOG00000001616	ENSGFOG00000001595	GTPBP2 (ENSGFOG00000001562) #18	POLH (ENSGFOG00000001545) #19	XPO5 (ENSGFOG00000001501) #20	POLR1C (ENSGFOG00000001471) #21	YIPF3 (ENSGFOG00000001426) #22	LRRC73 (ENSGFOG00000001411) #23	ENSGFOG00000001396	DLK2 (ENSGFOG00000001388) #25	ENSGFOG00000001376	ZNF318 (ENSGFOG00000001362) #29	FAM98A (ENSGFOG00000001348)	RASGRP3 (ENSGFOG00000001339)	LTBP1 (ENSGFOG00000001307)	TTC27 (ENSGFOG00000001282)	BIRC6 (ENSGFOG00000001003)	YIPF4 (ENSGFOG00000000969)	RMDN2 (ENSGFOG00000000949)	CYP1B1 (ENSGFOG00000000943)	EIF2AK2 (ENSGFOG00000000927)	GPATCH11 (ENSGFOG00000000909)
Passeroidea	ANCESTRAL SPECIES		ENSGT00390000018525.a.a	ENSGT00940000157912	ENSGT00940000156543	ENSGT00940000155310.b	ENSGT00940000157330	ENSGT00390000011034	ENSGT00950000182836.b.b.b.b	ENSGT00880000138034	ENSGT00940000155208.u.b.b	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a	ENSGT00390000003094
Zebra finch	MODERN SPECIES	23	HNRNPU (ENSTGUG00000008309)	EFCAB2 (ENSTGUG00000019448)	KIF26B (ENSTGUG00000008377)	ENSTGUG00000029207	ENSTGUG00000021382	TFB2M (ENSTGUG00000008396)	CNST (ENSTGUG00000008403)	ENSTGUG00000009271	ENSTGUG00000009240	ENSTGUG00000009224	MAD2L1BP (ENSTGUG00000025478) #17	GTPBP2 (ENSTGUG00000009198) #18	POLH (ENSTGUG00000009195) #19	XPO5 (ENSTGUG00000009168) #20	POLR1C (ENSTGUG00000009159) #21	YIPF3 (ENSTGUG00000009133) #22	LRRC73 (ENSTGUG00000009122) #23	ENSTGUG00000026328	DLK2 (ENSTGUG00000021435) #25	ENSTGUG00000009082	ZNF318 (ENSTGUG00000009066) #29	FAM98A (ENSTGUG00000009042)	RASGRP3 (ENSTGUG00000009015)	LTBP1 (ENSTGUG00000008923)	TTC27 (ENSTGUG00000008893)	BIRC6 (ENSTGUG00000008833)	YIPF4 (ENSTGUG00000008824)	CDC42EP3 (ENSTGUG00000008820)	RMDN2 (ENSTGUG00000008805)	CYP1B1 (ENSTGUG00000029201)	NANP (ENSTGUG00000008794)
Common canary	MODERN SPECIES	1	RNASET2 (ENSSCAG00000010909)	RPS6KA2 (ENSSCAG00000010979)	MPC1 (ENSSCAG00000011139)	SFT2D1 (ENSSCAG00000011142)	TBXT (ENSSCAG00000011145)	PRKN (ENSSCAG00000011159)	AGPAT4 (ENSSCAG00000011164)	MAP3K4 (ENSSCAG00000011173)	ENSSCAG00000011197	ENSSCAG00000011226	MAD2L1BP (ENSSCAG00000011236) #17	GTPBP2 (ENSSCAG00000011243) #18	POLH (ENSSCAG00000011258) #19	XPO5 (ENSSCAG00000011278) #20	POLR1C (ENSSCAG00000011320) #21	YIPF3 (ENSSCAG00000011383) #22	LRRC73 (ENSSCAG00000011465) #23	ENSSCAG00000011471	DLK2 (ENSSCAG00000011474) #25	ENSSCAG00000011480	ZNF318 (ENSSCAG00000011502) #29	FAM98A (ENSSCAG00000011521)	RASGRP3 (ENSSCAG00000011543)	LTBP1 (ENSSCAG00000011687)	TTC27 (ENSSCAG00000011710)	BIRC6 (ENSSCAG00000011748)	YIPF4 (ENSSCAG00000011797)	CDC42EP3 (ENSSCAG00000011801)	RMDN2 (ENSSCAG00000011811)	CYP1B1 (ENSSCAG00000011814)	NANP (ENSSCAG00000011820)
Galloanserae	ANCESTRAL SPECIES	2	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000175262	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00900000143268	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Anatidae	ANCESTRAL SPECIES	11	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000175262	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00900000143268	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Pink-footed goose	MODERN SPECIES	64	HSP90AB1 (ENSABRG00000019643) ##9	SLC29A1 (ENSABRG00000019642) #10	SLC35B2 (ENSABRG00000019639) #8	CAPN11 (ENSABRG00000019619) #11	TMEM63B (ENSABRG00000019612) #12	MRPL14 (ENSABRG00000019610) #13	VEGFA (ENSABRG00000019601) #14	MRPS18A (ENSABRG00000019591) #15	RSPH9 (ENSABRG00000019585) #16	ENSABRG00000019574	MAD2L1BP (ENSABRG00000019569) #17	GTPBP2 (ENSABRG00000019486) #18	POLH (ENSABRG00000019452) #19	XPO5 (ENSABRG00000019302) #20	POLR1C (ENSABRG00000019257) #21	YIPF3 (ENSABRG00000019216) #22	LRRC73 (ENSABRG00000019200) #23	ENSABRG00000019032	DLK2 (ENSABRG00000019020) #25	ENSABRG00000018966	ZNF318 (ENSABRG00000018946) #29	FAM98A (ENSABRG00000018938)	RASGRP3 (ENSABRG00000018738)	LTBP1 (ENSABRG00000018707)	TTC27 (ENSABRG00000018604)	YIPF4 (ENSABRG00000018191)	CDC42EP3 (ENSABRG00000018188)	RMDN2 (ENSABRG00000018186)	CYP1B1 (ENSABRG00000018162)	NANP (ENSABRG00000018160)	EIF2AK2 (ENSABRG00000018144)
Duck	MODERN SPECIES	21	NFKBIE (ENSAPLG00000015410) #7	SLC35B2 (ENSAPLG00000015415) #8	ENSAPLG00000024554	TMEM63B (ENSAPLG00000016007) #12	MRPL14 (ENSAPLG00000016246) #13	VEGFA (ENSAPLG00000025704) #14	RSPH9 (ENSAPLG00000016326) #16	MRPS18A (ENSAPLG00000016280) #15	ENSAPLG00000016336	MAD2L1BP (ENSAPLG00000016405) #17	ENSAPLG00000017749 #18	ENSAPLG00000024510	POLH (ENSAPLG00000001092) #19	XPO5 (ENSAPLG00000001469) #20	POLR1C (ENSAPLG00000002908) #21	YIPF3 (ENSAPLG00000003089) #22	ZNF318 (ENSAPLG00000004126) #29	ENSAPLG00000003561	FAM98A (ENSAPLG00000012120)	RASGRP3 (ENSAPLG00000012309)	LTBP1 (ENSAPLG00000012621)	ENSAPLG00000018058	TTC27 (ENSAPLG00000013557)	BIRC6 (ENSAPLG00000014195)	YIPF4 (ENSAPLG00000007556)	CDC42EP3 (ENSAPLG00000011470)	ENSAPLG00000015804	CYP1B1 (ENSAPLG00000001407)	NANP (ENSAPLG00000015758)	EIF2AK2 (ENSAPLG00000030443)	GPATCH11 (ENSAPLG00000009863)
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084.a #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a	ENSGT00390000003094
Japanese quail	MODERN SPECIES	21	SLC35B2 (ENSCJPG00005010304) #8	HSP90AB1 (ENSCJPG00005010305) ##9	SLC29A1 (ENSCJPG00005010306) #10	CAPN11 (ENSCJPG00005010310) #11	TMEM63B (ENSCJPG00005010350) #12	MRPL14 (ENSCJPG00005011305) #13	VEGFA (ENSCJPG00005011306) #14	MRPS18A (ENSCJPG00005011323) #15	RSPH9 (ENSCJPG00005011325) #16	ENSCJPG00005011327	MAD2L1BP (ENSCJPG00005011328) #17	GTPBP2 (ENSCJPG00005011329) #18	POLH (ENSCJPG00005011345) #19	XPO5 (ENSCJPG00005011348) #20	POLR1C (ENSCJPG00005011351) #21	YIPF3 (ENSCJPG00005011353) #22	LRRC73 (ENSCJPG00005011357) #23	ENSCJPG00005011358	DLK2 (ENSCJPG00005011361) #25	ENSCJPG00005011364	ZNF318 (ENSCJPG00005011371) #29	FAM98A (ENSCJPG00005011373)	RASGRP3 (ENSCJPG00005011374)	LTBP1 (ENSCJPG00005011381)	TTC27 (ENSCJPG00005011386)	BIRC6 (ENSCJPG00005011541)	YIPF4 (ENSCJPG00005012134)	ENSCJPG00005012135	CDC42EP3 (ENSCJPG00005012136)	RMDN2 (ENSCJPG00005012138)	CYP1B1 (ENSCJPG00005012140)
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000170208	ENSGT00940000158672 #11	ENSGT00940000157084.a #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a	ENSGT00390000003094
Chicken	MODERN SPECIES	22	HSP90AB1 (ENSGALG00010019591) ##9	SLC29A1 (ENSGALG00010019602) #10	ENSGALG00010019621	CAPN11 (ENSGALG00010019641) #11	TMEM63B (ENSGALG00010019649) #12	MRPL14 (ENSGALG00010019659) #13	VEGFA (ENSGALG00010019716) #14	MRPS18A (ENSGALG00010019761) #15	RSPH9 (ENSGALG00010019794) #16	EPHX1L (ENSGALG00010019813)	MAD2L1BP (ENSGALG00010019832) #17	GTPBP2 (ENSGALG00010006983) #18	POLH (ENSGALG00010006998) #19	XPO5 (ENSGALG00010009623) #20	POLR1C (ENSGALG00010009699) #21	YIPF3 (ENSGALG00010009719) #22	LRRC73 (ENSGALG00010009740) #23	ENSGALG00010009778	DLK2 (ENSGALG00010007626) #25	ENSGALG00010007633	ZNF318 (ENSGALG00010007642) #29	FAM98A (ENSGALG00010007660)	RASGRP3 (ENSGALG00010007695)	LTBP1 (ENSGALG00010007719)	TTC27 (ENSGALG00010007588)	BIRC6 (ENSGALG00010007614)	YIPF4 (ENSGALG00010009798)	CDC42EP3 (ENSGALG00010010080)	RMDN2 (ENSGALG00010007318)	CYP1B1 (ENSGALG00010007388)	NANP (ENSGALG00010007391)
Turkey	MODERN SPECIES	11	ENSMGAG00000011172	ENSMGAG00000011167	ENSMGAG00000015830	ENSMGAG00000011163	ENSMGAG00000011117	ENSMGAG00000018176	ENSMGAG00000011074	ENSMGAG00000011063	ENSMGAG00000010985	ENSMGAG00000022571	ENSMGAG00000011056 #29	ENSMGAG00000011037 #25	ENSMGAG00000011043	LRRC73 (ENSMGAG00000011029) #23	ENSMGAG00000021748	ENSMGAG00000011023 #22	XPO5 (ENSMGAG00000010938) #20	ENSMGAG00000011020 #21	ENSMGAG00000010916 #18	ENSMGAG00000010927 #19	ENSMGAG00000010904	MAD2L1BP (ENSMGAG00000010914) #17	ENSMGAG00000010915 #15	ENSMGAG00000015828 #16	VEGFA (ENSMGAG00000010893) #14	ENSMGAG00000010889 #13	ENSMGAG00000010869 #12	ENSMGAG00000021459 #12	ENSMGAG00000010826 #11	SLC35B2 (ENSMGAG00000010805) #8	ENSMGAG00000010808 ##9
African ostrich	MODERN SPECIES	1025	NFKBIE (ENSSCUG00000016047) #7	SLC35B2 (ENSSCUG00000016046) #8	HSP90AB1 (ENSSCUG00000016042) ##9	SLC29A1 (ENSSCUG00000016037) #10	CAPN11 (ENSSCUG00000016021) #11	TMEM63B (ENSSCUG00000016008) #12	MRPL14 (ENSSCUG00000016000) #13	VEGFA (ENSSCUG00000015978) #14	MRPS18A (ENSSCUG00000015974) #15	RSPH9 (ENSSCUG00000015972) #16	ENSSCUG00000015969	GTPBP2 (ENSSCUG00000015963) #18	POLH (ENSSCUG00000015946) #19	XPO5 (ENSSCUG00000015928) #20	POLR1C (ENSSCUG00000015922) #21	YIPF3 (ENSSCUG00000015920) #22	LRRC73 (ENSSCUG00000015918) #23	ENSSCUG00000015916	DLK2 (ENSSCUG00000015914) #25	ENSSCUG00000015910	ZNF318 (ENSSCUG00000015909) #29	FAM98A (ENSSCUG00000015907)	RASGRP3 (ENSSCUG00000015905)	LTBP1 (ENSSCUG00000015855)	TTC27 (ENSSCUG00000015808)	BIRC6 (ENSSCUG00000015733)	YIPF4 (ENSSCUG00000015690)	CDC42EP3 (ENSSCUG00000015688)	RMDN2 (ENSSCUG00000015681)	ENSSCUG00000015677	NANP (ENSSCUG00000015675)
Australian saltwater crocodile	MODERN SPECIES	60	SLC35B2 (ENSCPRG00005010751) #8	ENSCPRG00005010794 ##9	SLC29A1 (ENSCPRG00005010797) #10	CAPN11 (ENSCPRG00005010843) #11	TMEM63B (ENSCPRG00005011287) #12	MRPL14 (ENSCPRG00005011733) #13	VEGFA (ENSCPRG00005011788) #14	MRPS18A (ENSCPRG00005011796) #15	RSPH9 (ENSCPRG00005011824) #16	ENSCPRG00005011829	MAD2L1BP (ENSCPRG00005011837) #17	GTPBP2 (ENSCPRG00005011854) #18	POLH (ENSCPRG00005011913) #19	XPO5 (ENSCPRG00005012025) #20	POLR1C (ENSCPRG00005012578) #21	YIPF3 (ENSCPRG00005012654) #22	LRRC73 (ENSCPRG00005012658) #23	ENSCPRG00005012660	DLK2 (ENSCPRG00005012664) #25	ENSCPRG00005012699	ZNF318 (ENSCPRG00005012721) #29	FAM98A (ENSCPRG00005012727)	RASGRP3 (ENSCPRG00005012741)	LTBP1 (ENSCPRG00005012908)	TTC27 (ENSCPRG00005013242)	BIRC6 (ENSCPRG00005013299)	YIPF4 (ENSCPRG00005013351)	NLRC4 (ENSCPRG00005013358)	CDC42EP3 (ENSCPRG00005013362)	RMDN2 (ENSCPRG00005013368)	ENSCPRG00005013369
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00900000143268	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Testudinoidea	ANCESTRAL SPECIES		ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00900000143268	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Emydidae	ANCESTRAL SPECIES		ENSGT00950000182898.a.a.a.a.b #10	ENSGT00950000182841.b.b.a.d	ENSGT00940000170208	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a	ENSGT00390000003094
Three-toed box turtle	MODERN SPECIES	31	ENSTMTG00000002413 ##9	SLC29A1 (ENSTMTG00000002421) #10	ENSTMTG00000002425	CAPN11 (ENSTMTG00000002428) #11	TMEM63B (ENSTMTG00000002440) #12	MRPL14 (ENSTMTG00000002471) #13	VEGFA (ENSTMTG00000002476) #14	MRPS18A (ENSTMTG00000002483) #15	RSPH9 (ENSTMTG00000002489) #16	ENSTMTG00000002495	MAD2L1BP (ENSTMTG00000002503) #17	GTPBP2 (ENSTMTG00000002512) #18	POLH (ENSTMTG00000002520) #19	XPO5 (ENSTMTG00000002578) #20	POLR1C (ENSTMTG00000002745) #21	YIPF3 (ENSTMTG00000002751) #22	LRRC73 (ENSTMTG00000002759) #23	ENSTMTG00000002763	DLK2 (ENSTMTG00000002768) #25	ENSTMTG00000002783	ZNF318 (ENSTMTG00000002828) #29	FAM98A (ENSTMTG00000002840)	RASGRP3 (ENSTMTG00000002848)	LTBP1 (ENSTMTG00000002913)	TTC27 (ENSTMTG00000003241)	BIRC6 (ENSTMTG00000004123)	YIPF4 (ENSTMTG00000004722)	CDC42EP3 (ENSTMTG00000004738)	RMDN2 (ENSTMTG00000004753)	CYP1B1 (ENSTMTG00000004779)	NANP (ENSTMTG00000004793)
painted turtle	MODERN SPECIES	12	SLC29A1 (ENSCPBG00000025308) #10	ENSCPBG00000025302	ENSCPBG00000025291	CAPN11 (ENSCPBG00000025283) #11	TMEM63B (ENSCPBG00000025267) #12	MRPL14 (ENSCPBG00000025263) #13	VEGFA (ENSCPBG00000025256) #14	MRPS18A (ENSCPBG00000025243) #15	RSPH9 (ENSCPBG00000025233) #16	ENSCPBG00000025231	MAD2L1BP (ENSCPBG00000025229) #17	GTPBP2 (ENSCPBG00000025223) #18	POLH (ENSCPBG00000025219) #19	XPO5 (ENSCPBG00000025210) #20	POLR1C (ENSCPBG00000025203) #21	YIPF3 (ENSCPBG00000025201) #22	LRRC73 (ENSCPBG00000025198) #23	ENSCPBG00000025194	DLK2 (ENSCPBG00000025191) #25	ENSCPBG00000025164	ZNF318 (ENSCPBG00000025150) #29	FAM98A (ENSCPBG00000025148)	RASGRP3 (ENSCPBG00000025146)	LTBP1 (ENSCPBG00000025144)	TTC27 (ENSCPBG00000025140)	ENSCPBG00000025139	BIRC6 (ENSCPBG00000024856)	YIPF4 (ENSCPBG00000024825)	CDC42EP3 (ENSCPBG00000024824)	CYP1B1 (ENSCPBG00000024820)	RMDN2 (ENSCPBG00000024816)
Testudinidae	ANCESTRAL SPECIES	6	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.i.b ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00900000143268	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Abingdon island giant tortoise	MODERN SPECIES	2764			SLC29A1 (ENSCABG00000020740) #10	CAPN11 (ENSCABG00000020734) #11	TMEM63B (ENSCABG00000020007) #12	MRPL14 (ENSCABG00000019872) #13	VEGFA (ENSCABG00000019852) #14	MRPS18A (ENSCABG00000019843) #15	RSPH9 (ENSCABG00000019828) #16	ENSCABG00000019821	MAD2L1BP (ENSCABG00000019817) #17	GTPBP2 (ENSCABG00000019815) #18	POLH (ENSCABG00000019813) #19	XPO5 (ENSCABG00000019702) #20	POLR1C (ENSCABG00000019684) #21	YIPF3 (ENSCABG00000019683) #22	LRRC73 (ENSCABG00000019682) #23	ENSCABG00000019681	DLK2 (ENSCABG00000019679) #25	ENSCABG00000019675	ZNF318 (ENSCABG00000019668) #29	FAM98A (ENSCABG00000019663)	RASGRP3 (ENSCABG00000019657)	LTBP1 (ENSCABG00000019638)
Goode s thornscrub tortoise	MODERN SPECIES	17	ENSGEVG00005014173	SLC29A1 (ENSGEVG00005014138) #10	CAPN11 (ENSGEVG00005014087) #11	TMEM63B (ENSGEVG00005013984) #12	MRPL14 (ENSGEVG00005013942) #13	VEGFA (ENSGEVG00005013826) #14	MRPS18A (ENSGEVG00005013782) #15	RSPH9 (ENSGEVG00005013714) #16	ENSGEVG00005013690	MAD2L1BP (ENSGEVG00005013653) #17	GTPBP2 (ENSGEVG00005013624) #18	ENSGEVG00005013611	POLH (ENSGEVG00005013584) #19	XPO5 (ENSGEVG00005013480) #20	POLR1C (ENSGEVG00005013418) #21	YIPF3 (ENSGEVG00005013390) #22	LRRC73 (ENSGEVG00005013269) #23	ENSGEVG00005013249	DLK2 (ENSGEVG00005013197) #25	ENSGEVG00005013109	ZNF318 (ENSGEVG00005013069) #29	FAM98A (ENSGEVG00005013042)	RASGRP3 (ENSGEVG00005012657)	LTBP1 (ENSGEVG00005012158)	ENSGEVG00005012095	TTC27 (ENSGEVG00005012007)	ENSGEVG00005011935	BIRC6 (ENSGEVG00005011790)	YIPF4 (ENSGEVG00005011729)	CDC42EP3 (ENSGEVG00005011713)	RMDN2 (ENSGEVG00005011625)
Chinese turtle	MODERN SPECIES	1709								VEGFA (ENSPSIG00000013976) #14	MRPS18A (ENSPSIG00000013672) #15	RSPH9 (ENSPSIG00000013574) #16	ENSPSIG00000013450	MAD2L1BP (ENSPSIG00000001105) #17	GTPBP2 (ENSPSIG00000013133) #18	POLH (ENSPSIG00000012685) #19	POLR1C (ENSPSIG00000012580) #21	YIPF3 (ENSPSIG00000012202) #22	LRRC73 (ENSPSIG00000011436) #23	ENSPSIG00000011032	DLK2 (ENSPSIG00000010538) #25	ENSPSIG00000010250	ZNF318 (ENSPSIG00000010067) #29	FAM98A (ENSPSIG00000009481)	RASGRP3 (ENSPSIG00000008745)	ENSPSIG00000008697	ENSPSIG00000008656	LTBP1 (ENSPSIG00000006827)	ENSPSIG00000006799	TTC27 (ENSPSIG00000005713)	YIPF4 (ENSPSIG00000005704)	ENSPSIG00000005630	CDC42EP3 (ENSPSIG00000001100)
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Episquamata	ANCESTRAL SPECIES		ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00530000069620	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Laterata	ANCESTRAL SPECIES	4	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00530000069620	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000000614.f #29	ENSGT00940000164531	ENSGT00390000000614.e #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Common wall lizard	MODERN SPECIES	11	ENSPMRG00000004430	ENSPMRG00000004418	CAPN11 (ENSPMRG00000004384) #11	ENSPMRG00000004377	TMEM63B (ENSPMRG00000004366) #12	ENSPMRG00000004362 #13	VEGFA (ENSPMRG00000004356) #14	ENSPMRG00000004352 #15	RSPH9 (ENSPMRG00000004348) #16	ENSPMRG00000004197	MAD2L1BP (ENSPMRG00000004154) #17	GTPBP2 (ENSPMRG00000004068) #18	POLH (ENSPMRG00000004049) #19	XPO5 (ENSPMRG00000004033) #20	POLR1C (ENSPMRG00000004015) #21	YIPF3 (ENSPMRG00000004004) #22	LRRC73 (ENSPMRG00000003997) #23	ENSPMRG00000003986	ENSPMRG00000003980	DLK2 (ENSPMRG00000003972) #25	ENSPMRG00000003914	ZNF318 (ENSPMRG00000003898) #29	ENSPMRG00000003891	FAM98A (ENSPMRG00000003870)	RASGRP3 (ENSPMRG00000003815)	LTBP1 (ENSPMRG00000003069)	TTC27 (ENSPMRG00000002472)	BIRC6 (ENSPMRG00000001197)	YIPF4 (ENSPMRG00000000582)	ENSPMRG00000000569	CDC42EP3 (ENSPMRG00000000560)
Argentine black and white tegu	MODERN SPECIES	7	HSP90AB1 (ENSSMRG00000005790) ##9	SLC29A1 (ENSSMRG00000005838) #10	ENSSMRG00000005860	CAPN11 (ENSSMRG00000005886) #11	TMEM63B (ENSSMRG00000006007) #12	MRPL14 (ENSSMRG00000006019) #13	VEGFA (ENSSMRG00000006067) #14	MRPS18A (ENSSMRG00000006147) #15	RSPH9 (ENSSMRG00000006162) #16	ENSSMRG00000006171	MAD2L1BP (ENSSMRG00000006189) #17	GTPBP2 (ENSSMRG00000006217) #18	POLH (ENSSMRG00000006223) #19	XPO5 (ENSSMRG00000006247) #20	POLR1C (ENSSMRG00000006279) #21	YIPF3 (ENSSMRG00000006282) #22	LRRC73 (ENSSMRG00000006283) #23	ENSSMRG00000006289	DLK2 (ENSSMRG00000006290) #25	ENSSMRG00000006300 #29	ENSSMRG00000006305	ENSSMRG00000006331	ENSSMRG00000006337 #29	FAM98A (ENSSMRG00000006345)	RASGRP3 (ENSSMRG00000006366)	LTBP1 (ENSSMRG00000006384)
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Elapidae	ANCESTRAL SPECIES		ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636.d #18	ENSGT00940000157048.k.b #19	ENSGT00940000155636.c #18	ENSGT00940000157048.k.a #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126.fb	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Elapidae_a	ANCESTRAL SPECIES	2	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636.c #18	ENSGT00940000157048.k.a #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126.fb	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Acanthophiinae	ANCESTRAL SPECIES	3	ENSGT00940000157927 #8	ENSGT01020000230401.a.a.a.j ##9	ENSGT00950000182898.a.a.a.a.b #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000002210.c.a	ENSGT00390000003812 #17	ENSGT00940000155636.c #18	ENSGT00940000157048.k.a #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00940000156126.fb	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a
Eastern brown snake	MODERN SPECIES	5	SLC35B2 (ENSPTXG00000005431) #8	HSP90AB1 (ENSPTXG00000005430) ##9	SLC29A1 (ENSPTXG00000005427) #10	CAPN11 (ENSPTXG00000005422) #11	TMEM63B (ENSPTXG00000005420) #12	MRPL14 (ENSPTXG00000005417) #13	VEGFA (ENSPTXG00000005415) #14	MRPS18A (ENSPTXG00000005412) #15	RSPH9 (ENSPTXG00000005411) #16	ENSPTXG00000005409	MAD2L1BP (ENSPTXG00000005407) #17	GTPBP2 (ENSPTXG00000005406) #18	POLH (ENSPTXG00000005404) #19	XPO5 (ENSPTXG00000005397) #20	POLR1C (ENSPTXG00000005394) #21	YIPF3 (ENSPTXG00000005392) #22	LRRC73 (ENSPTXG00000005391) #23	ENSPTXG00000005390	DLK2 (ENSPTXG00000005388) #25	ENSPTXG00000005386	ZNF318 (ENSPTXG00000005385) #29	FAM98A (ENSPTXG00000005382)	RASGRP3 (ENSPTXG00000005379)	LTBP1 (ENSPTXG00000001979)	TTC27 (ENSPTXG00000000699)	BIRC6 (ENSPTXG00000000600)	YIPF4 (ENSPTXG00000000565)	NLRC4 (ENSPTXG00000000561)	CDC42EP3 (ENSPTXG00000000557)	ENSPTXG00000000546	ENSPTXG00000000538
Mainland tiger snake	MODERN SPECIES	3	CAPN11 (ENSNSUG00000008888) #11	TMEM63B (ENSNSUG00000008569) #12	MRPL14 (ENSNSUG00000008568) #13	ENSNSUG00000008567	VEGFA (ENSNSUG00000008566) #14	MRPS18A (ENSNSUG00000008564) #15	RSPH9 (ENSNSUG00000008549) #16	ENSNSUG00000008548	MAD2L1BP (ENSNSUG00000008547) #17	ENSNSUG00000008546 #18	ENSNSUG00000008545 #18	POLH (ENSNSUG00000008544) #19	ENSNSUG00000008543 #20	ENSNSUG00000008542 #20	POLR1C (ENSNSUG00000008541) #21	YIPF3 (ENSNSUG00000008540) #22	LRRC73 (ENSNSUG00000008539) #23	ENSNSUG00000008538	DLK2 (ENSNSUG00000008537) #25	ENSNSUG00000008536	ENSNSUG00000008527	ZNF318 (ENSNSUG00000008526) #29	FAM98A (ENSNSUG00000008525)	RASGRP3 (ENSNSUG00000008524)	LTBP1 (ENSNSUG00000008523)	TTC27 (ENSNSUG00000008517)	BIRC6 (ENSNSUG00000008516)	YIPF4 (ENSNSUG00000008515)	NLRC4 (ENSNSUG00000008514)	CDC42EP3 (ENSNSUG00000008513)	RMDN2 (ENSNSUG00000008512)
Blue-lipped sea krait	MODERN SPECIES	976										EPHX1 (ENSLLTG00000006209)	MAD2L1BP (ENSLLTG00000006203) #17	GTPBP2 (ENSLLTG00000006200) #18	POLH (ENSLLTG00000006196) #19	XPO5 (ENSLLTG00000005867) #20	POLR1C (ENSLLTG00000005845) #21	YIPF3 (ENSLLTG00000005841) #22	LRRC73 (ENSLLTG00000005837) #23	ENSLLTG00000005829
Indian cobra	MODERN SPECIES		ENSNNAG00000017129 #11	ENSNNAG00000017150 #11	TMEM63B (ENSNNAG00000017206) #12	MRPL14 (ENSNNAG00000017235) #13	VEGFA (ENSNNAG00000017242) #14	MRPS18A (ENSNNAG00000017264) #15	ENSNNAG00000017283	RSPH9 (ENSNNAG00000017288) #16	EPHX1 (ENSNNAG00000017303)	MAD2L1BP (ENSNNAG00000017316) #17	GTPBP2 (ENSNNAG00000017326) #18	ENSNNAG00000017345 #19	ENSNNAG00000017353 #19	XPO5 (ENSNNAG00000017360) #20	POLR1C (ENSNNAG00000017390) #21	YIPF3 (ENSNNAG00000017400) #22	LRRC73 (ENSNNAG00000017406) #23	ENSNNAG00000017414	DLK2 (ENSNNAG00000017423) #25	ENSNNAG00000000011	ZNF318 (ENSNNAG00000000022) #29	FAM98A (ENSNNAG00000000025)	RASGRP3 (ENSNNAG00000000053)	LTBP1 (ENSNNAG00000000116)	TTC27 (ENSNNAG00000000141)	BIRC6 (ENSNNAG00000000146)	YIPF4 (ENSNNAG00000000171)	NLRC4 (ENSNNAG00000000176)	CDC42EP3 (ENSNNAG00000000180)	RMDN2 (ENSNNAG00000000183)	ENSNNAG00000000186
Lizard	MODERN SPECIES		ENSACAG00000045348	BTBD9 (ENSACAG00000014225)	ENSACAG00000036181	GLO1 (ENSACAG00000039197)	ENSACAG00000014346	ENSACAG00000036347	ENSACAG00000042936	ENSACAG00000035098	ENSACAG00000010116	MAD2L1BP (ENSACAG00000010099) #17	GTPBP2 (ENSACAG00000010036) #18	POLH (ENSACAG00000009980) #19	ENSACAG00000044058 #20	ENSACAG00000009808 #20	POLR1C (ENSACAG00000009764) #21	YIPF3 (ENSACAG00000009687) #22	LRRC73 (ENSACAG00000009661) #23	ENSACAG00000009630	DLK2 (ENSACAG00000038792) #25	ENSACAG00000009528	ZNF318 (ENSACAG00000009497) #29	FAM98A (ENSACAG00000009435)	RASGRP3 (ENSACAG00000009357)	LTBP1 (ENSACAG00000009007)	TTC27 (ENSACAG00000008869)	BIRC6 (ENSACAG00000008607)	ENSACAG00000043563	YIPF4 (ENSACAG00000008569)	NLRC4 (ENSACAG00000008534)	CDC42EP3 (ENSACAG00000008527)	ENSACAG00000008473
tuatara	MODERN SPECIES	1943		VEGFA (ENSSPUG00000011501) #14	MRPS18A (ENSSPUG00000011517) #15	RSPH9 (ENSSPUG00000011524) #16	ENSSPUG00000011599	MAD2L1BP (ENSSPUG00000011617) #17	GTPBP2 (ENSSPUG00000011642) #18	POLH (ENSSPUG00000011675) #19	ENSSPUG00000011728	ENSSPUG00000011735 #20	ENSSPUG00000011745 #20	ENSSPUG00000011754	ENSSPUG00000011759	ENSSPUG00000011779 #20	POLR1C (ENSSPUG00000011822) #21	YIPF3 (ENSSPUG00000011840) #22	LRRC73 (ENSSPUG00000011871) #23	ENSSPUG00000011894	DLK2 (ENSSPUG00000011908) #25	ENSSPUG00000012006 #29	ZNF318 (ENSSPUG00000012013) #29	FAM98A (ENSSPUG00000012028)	RASGRP3 (ENSSPUG00000012047)	LTBP1 (ENSSPUG00000012078)	TTC27 (ENSSPUG00000012153)	BIRC6 (ENSSPUG00000012210)	YIPF4 (ENSSPUG00000012304)
Anura	ANCESTRAL SPECIES	233									ENSGT00390000013762.b.a	ENSGT00940000159341	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT00940000161321 #30
Frog	MODERN SPECIES	5	ENSXETG00000041556	ENSXETG00000042425	ENSXETG00000042133	slc29a1 (ENSXETG00000043518) #10	ENSXETG00000045823	tcte1 (ENSXETG00000010891)	MAD2L1BP (ENSXETG00000048874) #17	gtpbp2 (ENSXETG00000048908) #18	ENSXETG00000045079	polh (ENSXETG00000048334) #19	xpo5 (ENSXETG00000010883) #20	ENSXETG00000003957 #20	xpo5.2 (ENSXETG00000010884) #20	ENSXETG00000047945	polr1c (ENSXETG00000010882) #21	yipf3 (ENSXETG00000047304) #22	lrrc73 (ENSXETG00000042652) #23	tjap1 (ENSXETG00000045411)	ENSXETG00000046868	dlk2 (ENSXETG00000042444)	abcc10 (ENSXETG00000010586)	znf318 (ENSXETG00000039019) #29	ENSXETG00000046269	crip3 (ENSXETG00000045991) #30	rnf8 (ENSXETG00000010581)	XB22169453 [provisional] (ENSXETG00000045168)	naglu (ENSXETG00000031856)	cmtr1 (ENSXETG00000009964)	kcnk5 (ENSXETG00000045856)	SAYSD1 (ENSXETG00000046980)	glp1r (ENSXETG00000046829)
Actinopterygii	ANCESTRAL SPECIES	73	ENSGT00390000008848	ENSGT00940000165200	ENSGT00940000154902	ENSGT00510000047676	ENSGT00940000153168.B	ENSGT00940000156126	ENSGT00500000044929	ENSGT00940000155823.B	ENSGT00940000158843	ENSGT00940000167863	ENSGT00940000157865	ENSGT00570000079239	ENSGT00390000013448.a.a	ENSGT00390000002970	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT01030000234620.a.a.a.b	ENSGT00390000016927	ENSGT00390000001216 #33
Reedfish	MODERN SPECIES	6	ENSECRG00000017549	exo1 (ENSECRG00000017500)	yipf4 (ENSECRG00000017405)	COX6A1 (ENSECRG00000017354)	ENSECRG00000017334	BIRC6 (ENSECRG00000016833)	ENSECRG00000016583	LTBP1 (ENSECRG00000016077)	rasgrp3 (ENSECRG00000015885)	FAM98A (ENSECRG00000015851)	ENSECRG00000015791	nvl (ENSECRG00000015733)	degs1 (ENSECRG00000015517)	fbxo28 (ENSECRG00000015463)	polr1c (ENSECRG00000015427) #21	yipf3 (ENSECRG00000015119) #22	LRRC73 (ENSECRG00000015041) #23	ENSECRG00000014952	DLK2 (ENSECRG00000014915) #25	ENSECRG00000014840	ENSECRG00000014708 #29	ppp2r5d (ENSECRG00000014657)	mea1 (ENSECRG00000020885)	dnph1 (ENSECRG00000020864) #33	CUL7 (ENSECRG00000020812) #34	srfb (ENSECRG00000020770) #35	ptk7a (ENSECRG00000020679) #36	soul4 (ENSECRG00000020641)	ENSECRG00000020591	mrpl2 (ENSECRG00000020564)	ENSECRG00000020556
Neopterygii	ANCESTRAL SPECIES	81	ENSGT00390000008848	ENSGT00940000165200	ENSGT00940000154902	ENSGT00510000047676	ENSGT00940000153168.B	ENSGT00940000156126	ENSGT00500000044929	ENSGT00940000155823.B	ENSGT00940000158843	ENSGT00440000037341.a	ENSGT00940000157865	ENSGT00570000079239	ENSGT00390000013448.a.a	ENSGT00390000002970	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00940000164531	ENSGT00390000000614 #29	ENSGT01030000234620.a.a.a.b	ENSGT00390000016927	ENSGT00390000001216 #33
Spotted gar	MODERN SPECIES	654	ENSLOCG00000016635	ENSLOCG00000016636	ENSLOCG00000016638	exo1 (ENSLOCG00000016639)	yipf4 (ENSLOCG00000016640)	BIRC6 (ENSLOCG00000016644)	ttc27 (ENSLOCG00000016680)	LTBP1 (ENSLOCG00000016686)	rasgrp3 (ENSLOCG00000016689)	FAM98A (ENSLOCG00000016699)	ENSLOCG00000016701	nvl (ENSLOCG00000016706)	degs1 (ENSLOCG00000016708)	fbxo28 (ENSLOCG00000016709)	polr1c (ENSLOCG00000016710) #21	yipf3 (ENSLOCG00000016712) #22	LRRC73 (ENSLOCG00000016718) #23	ENSLOCG00000016719	DLK2 (ENSLOCG00000016721) #25	ENSLOCG00000016723	ENSLOCG00000016729	ENSLOCG00000016733 #29	ppp2r5d (ENSLOCG00000016734)	mea1 (ENSLOCG00000016738)	dnph1 (ENSLOCG00000016740) #33	CUL7 (ENSLOCG00000016743) #34	ninl (ENSLOCG00000016750)	gins1 (ENSLOCG00000016757)	abhd12 (ENSLOCG00000016763)	pygb (ENSLOCG00000016769)	ENSLOCG00000016781
Osteoglossocephalai	ANCESTRAL SPECIES	96	ENSGT00390000017746	ENSGT00940000165200	ENSGT00940000154902	ENSGT00510000047676	ENSGT00940000153168.B	ENSGT00940000156126	ENSGT00500000044929	ENSGT00940000155823.B	ENSGT00940000158843	ENSGT00440000037341.a	ENSGT00940000157865	ENSGT00570000079239	ENSGT00390000013448.a.a	ENSGT00390000002970	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793	ENSGT01100000263540.A.a
Clupeocephala	ANCESTRAL SPECIES	89	ENSGT00990000203619.A.b.b.b.a.e	ENSGT01030000234573.B.c.b.a	ENSGT00940000159658.a	ENSGT00940000159658.b.b	ENSGT00940000154815.b.b	ENSGT00390000003039	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793	ENSGT01100000263540.A.a
Otomorpha	ANCESTRAL SPECIES	32	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e.k	ENSGT00940000159658.b.b	ENSGT00940000154815.b.b	ENSGT00390000003039	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00390000001094	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a
Clupeiformes	ANCESTRAL SPECIES	35	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e.k	ENSGT00940000159658.b.b	ENSGT00940000154815.b.b	ENSGT00390000003039	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00940000172304.a.a	ENSGT00390000001094.`b	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000167706
Atlantic herring	MODERN SPECIES	4	ENSCHAG00000004418	mtg1 (ENSCHAG00000004441)	ENSCHAG00000004535	ENSCHAG00000004549	ENSCHAG00000004594	ENSCHAG00000004687	ENSCHAG00000004778	prph2b (ENSCHAG00000004787)	UBR2 (ENSCHAG00000004826)	ENSCHAG00000008532	prkn (ENSCHAG00000008587)	ENSCHAG00000008756	ENSCHAG00000008773	ENSCHAG00000008781	ncoa4 (ENSCHAG00000008809)	yipf3 (ENSCHAG00000008825) #22	LRRC73 (ENSCHAG00000008886) #23	ENSCHAG00000008899	DLK2 (ENSCHAG00000008913) #25	dnph1 (ENSCHAG00000009007) #33	mea1 (ENSCHAG00000009013)	ppp2r5d (ENSCHAG00000009027)	ENSCHAG00000009156 #29	PPP2R5D (ENSCHAG00000009221)	ENSCHAG00000009343	CUL7 (ENSCHAG00000009408) #34	SYNDIG1 (ENSCHAG00000011053)	ENSCHAG00000011088	apmap (ENSCHAG00000011098)	ENSCHAG00000011129	TMEM26 (ENSCHAG00000011144)
Denticle herring	MODERN SPECIES	18	vps26a (ENSDCDG00000030022)	supv3l1 (ENSDCDG00000030031)	ENSDCDG00000030054	tacr2 (ENSDCDG00000030348)	tspan15 (ENSDCDG00000030351)	rufy2 (ENSDCDG00000030356)	HNRNPH3 (ENSDCDG00000030423)	PBLD (ENSDCDG00000030428)	PBLD (ENSDCDG00000030430)	DNA2 (ENSDCDG00000030432)	ppm1g (ENSDCDG00000030437)	fam120b (ENSDCDG00000030440)	dld (ENSDCDG00000030444)	phf10 (ENSDCDG00000030542)	ncoa4 (ENSDCDG00000013967)	yipf3 (ENSDCDG00000013998) #22	LRRC73 (ENSDCDG00000014047) #23	ENSDCDG00000014063	DLK2 (ENSDCDG00000014083) #25	dnph1 (ENSDCDG00000014098) #33	mea1 (ENSDCDG00000014117)	ppp2r5d (ENSDCDG00000014346)	ENSDCDG00000016753 #29	ENSDCDG00000016765	fam135a (ENSDCDG00000016781)	ENSDCDG00000016803	mettl9 (ENSDCDG00000016807)	itgb3b (ENSDCDG00000016909)	ENSDCDG00000020528	hells (ENSDCDG00000020562)	vax1 (ENSDCDG00000021379)
Otophysi	ANCESTRAL SPECIES		ENSGT00990000203619.A.b.b.b.a.e.k	ENSGT00940000159658.b.b	ENSGT00940000154815.b.b	ENSGT00390000003039	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00730000112471	ENSGT00390000001094	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290.c	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000177578	ENSGT00940000158427	ENSGT00530000063168.b
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e.k	ENSGT00940000159658.b.b	ENSGT00940000154815.b.b	ENSGT00390000003039	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290.c	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000177578	ENSGT00940000158427	ENSGT00530000063168.b
Zebrafish	MODERN SPECIES	4	wdr11 (ENSDARG00000075245)	ENSDARG00000074653	XPO5 (ENSDARG00000098868) #20	ENSDARG00000112522 #20	wu:fj16a03 (ENSDARG00000100952)	EML4 (ENSDARG00000109443)	pkdcca (ENSDARG00000035161)	prph2b (ENSDARG00000014840)	UBR2 (ENSDARG00000070164)	ENSDARG00000031278	prkn (ENSDARG00000021555)	QKI (ENSDARG00000002026)	ENSDARG00000104860	ENSDARG00000100375	ncoa4 (ENSDARG00000021439)	yipf3 (ENSDARG00000020449) #22	LRRC73 (ENSDARG00000063411) #23	ENSDARG00000010681	DLK2 (ENSDARG00000076247) #25	dnph1 (ENSDARG00000075730) #33	mea1 (ENSDARG00000039820)	ppp2r5d (ENSDARG00000014428)	ENSDARG00000090054 #29	ENSDARG00000089355	sft2d1 (ENSDARG00000007362)	PRR18 (ENSDARG00000093768)	ENSDARG00000094016	TBXT (ENSDARG00000039806)	pde10a (ENSDARG00000003449)	c1d (ENSDARG00000021112)	pla2g12b (ENSDARG00000015662)
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	87	ENSGT00940000161584.k.b.a	ENSGT00390000013008	ENSGT00990000203619.A.b.b.b.a.e.k.d	ENSGT00940000159658.b.b.a	ENSGT00940000154815.b.b.h	ENSGT00390000003039.b	ENSGT00940000158434.b	ENSGT00390000001205.a.b	ENSGT00940000157303.e.a	ENSGT00950000183075.a.a.a.a.s	ENSGT00390000011034	ENSGT00940000155310.a.b.a	ENSGT00940000172304.a.a	ENSGT00390000001094.cb	ENSGT00390000008403.a	ENSGT00940000153766.A.c.a #22
Cyprininae_a	ANCESTRAL SPECIES	53	ENSGT00940000161584.k.b.a	ENSGT00390000013008.b	ENSGT00990000203619.A.b.b.b.a.e.k.d	ENSGT00940000159658.b.b.a	ENSGT00940000154815.b.b.h	ENSGT00390000003039.b	ENSGT00940000158434.b	ENSGT00390000001205.a.b	ENSGT00940000157303.e.a	ENSGT00950000183075.a.a.a.a.s	ENSGT00390000011034.jd	ENSGT00940000155310.a.b.a	ENSGT00940000172304.a.a	ENSGT00390000001094.cb	ENSGT00390000008403.a	ENSGT00940000153766.A.c.a #22	ENSGT00390000003256.k #23	ENSGT00940000164045.b	ENSGT00940000160761.g #25	ENSGT00390000001216 #33	ENSGT00390000016927.a	ENSGT01030000234620.a.a.a.b.r	ENSGT00390000000614.b #29	ENSGT00390000016950.mb.a	ENSGT00940000154457.b	ENSGT00940000160203.d	ENSGT00940000153954.p.b #34	ENSGT00950000183147.B.j	ENSGT00940000160277.h	ENSGT00440000039984.a.g	ENSGT00940000177578
Golden-line barbel	MODERN SPECIES	1008												QKI (ENSSGRG00000045239)	ENSSGRG00000045238	ENSSGRG00000045197	ncoa4 (ENSSGRG00000045196)	yipf3 (ENSSGRG00000044869) #22	LRRC73 (ENSSGRG00000044851) #23	ENSSGRG00000044850	dnph1 (ENSSGRG00000044849) #33	dnph1 (ENSSGRG00000044848) #33
Goldfish	MODERN SPECIES	31	haao (ENSCARG00000059745)	OXER1 (ENSCARG00000059790)	KCNG3 (ENSCARG00000059822)	COX7A2L (ENSCARG00000059836)	ENSCARG00000059866	EML4 (ENSCARG00000060034)	ENSCARG00000061005	pkdcca (ENSCARG00000061017)	prph2b (ENSCARG00000061037)	UBR2 (ENSCARG00000061393)	prkn (ENSCARG00000063999)	QKI (ENSCARG00000064432)	ENSCARG00000064461	ENSCARG00000064475	ncoa4 (ENSCARG00000064498)	yipf3 (ENSCARG00000064521) #22	LRRC73 (ENSCARG00000064574) #23	ENSCARG00000064608	DLK2 (ENSCARG00000064613) #25	dnph1 (ENSCARG00000064617) #33	mea1 (ENSCARG00000064621)	ppp2r5d (ENSCARG00000064665)	ENSCARG00000065862 #29	ENSCARG00000065869	tuba4l (ENSCARG00000065884)	ENSCARG00000065953 #34	SYNDIG1 (ENSCARG00000066665)	ENSCARG00000066672	apmap (ENSCARG00000066697)	ppm1g (ENSCARG00000066740)	fam120b (ENSCARG00000066832)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000153766.A.c.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000153766.A.c.b #22
Golden-line barbel	MODERN SPECIES	696												QKI (ENSSGRG00000011011)	ENSSGRG00000011019	ENSSGRG00000011022	ncoa4 (ENSSGRG00000011026)	yipf3 (ENSSGRG00000011043) #22	ENSSGRG00000011124 #23	ENSSGRG00000011125	DLK2 (ENSSGRG00000011126) #25	ENSSGRG00000011127	mea1 (ENSSGRG00000011128)	ppp2r5d (ENSSGRG00000011173)	ENSSGRG00000011621 #29	ENSSGRG00000011624	tuba4l (ENSSGRG00000011625)	ENSSGRG00000011825 #34	ENSSGRG00000012347 #34	SYNDIG1 (ENSSGRG00000012348)	ENSSGRG00000012349	apmap (ENSSGRG00000012350)	ppm1g (ENSSGRG00000012354)
Cyprininae	ANCESTRAL SPECIES	175	ENSGT00940000161584.k.a	ENSGT00390000010899.a.b.b.a.c	ENSGT00990000203619.A.b.b.b.a.e.k.c	ENSGT00940000159658.b.b.b	ENSGT00940000154815.b.b.g	ENSGT00970000193390.c.b.b.b.a.db	ENSGT00390000003039.a	ENSGT00940000158434.a	ENSGT00390000001205.a.a	ENSGT00940000157303.e.b	ENSGT00950000183075.a.a.a.a.t	ENSGT00910000144630.a	ENSGT00940000155310.a.b.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00390000008403.b	ENSGT00940000153766.A.d #22	ENSGT00390000003256 #23	ENSGT00940000164045.b	ENSGT00940000160761.g #25	ENSGT00390000001216 #33	ENSGT00390000016927.a	ENSGT01030000234620.a.a.a.b.r	ENSGT00390000000614.b #29	ENSGT00390000016950.mb.a	ENSGT00940000154457.b	ENSGT00940000160203.d	ENSGT00940000153954.p.b #34	ENSGT00950000183147.B.j	ENSGT00940000160277.h	ENSGT00440000039984.a.g	ENSGT00940000177578
Goldfish	MODERN SPECIES	4	KCNG3 (ENSCARG00000006467)	COX7A2L (ENSCARG00000006474)	ENSCARG00000006488	ENSCARG00000006497	EML4 (ENSCARG00000006561)	pkdcca (ENSCARG00000006984)	ENSCARG00000007009	prph2b (ENSCARG00000007020)	UBR2 (ENSCARG00000007195)	ENSCARG00000009731	ENSCARG00000009737	ENSCARG00000009740	QKI (ENSCARG00000009745)	ENSCARG00000009754	ncoa4 (ENSCARG00000009756)	YIPF3 (ENSCARG00000009765) #22	LRRC73 (ENSCARG00000009783) #23	ENSCARG00000009795	ENSCARG00000009797	DLK2 (ENSCARG00000009800) #25	ENSCARG00000009802	mea1 (ENSCARG00000009803)	ppp2r5d (ENSCARG00000009835)	ENSCARG00000010248 #29	ENSCARG00000010256	ENSCARG00000010295	ENSCARG00000010365 #34	SYNDIG1 (ENSCARG00000012249)	ENSCARG00000012253	apmap (ENSCARG00000012259)	ppm1g (ENSCARG00000012296)
Cyprininae_a	ANCESTRAL SPECIES	216	ENSGT00390000010899.a.b.b.a.c	ENSGT00990000203619.A.b.b.b.a.e.k.c	ENSGT00940000159658.b.b.b	ENSGT00940000154815.b.b.g	ENSGT00970000193390.c.b.b.b.a.db	ENSGT00390000003039.a	ENSGT00940000158434.a	ENSGT00390000001205.a.a	ENSGT00940000157303.e.b	ENSGT00950000183075.a.a.a.a.t	ENSGT00910000144630.a	ENSGT00390000011034.kd	ENSGT00940000155310.a.b.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00390000008403.b	ENSGT00940000153766.A.d #22	ENSGT00390000003256.l #23	ENSGT00940000164045.a	ENSGT00940000160761.h #25	ENSGT00390000016927.b	ENSGT01030000234620.a.a.a.b.q	ENSGT00390000000614.a #29	ENSGT00940000168290.c	ENSGT00390000016950.mb.b	ENSGT00940000164832.e.b	ENSGT00940000153954.p.a #34	ENSGT00950000183147.B.i	ENSGT00940000160277.g	ENSGT00440000039984.a.h	ENSGT00940000158427.l
Common carp reference	DUPLICATION
Common carp reference	MODERN SPECIES	48	ENSCCRG00000066862	ENSCCRG00000065973	ENSCCRG00000067672	KCNG3 (ENSCCRG00000069780)	COX7A2L (ENSCCRG00000024155)	ENSCCRG00000068640	EML4 (ENSCCRG00000019370)	pkdcca (ENSCCRG00000053025)	prph2b (ENSCCRG00000008643)	ENSCCRG00000006695	prkn (ENSCCRG00000048867)	ENSCCRG00000076786	ENSCCRG00000072566	ENSCCRG00000076016	ncoa4 (ENSCCRG00000043940)	yipf3 (ENSCCRG00000043721) #22	ENSCCRG00000014478 #23	ENSCCRG00000074224	DLK2 (ENSCCRG00000014151) #25	dnph1 (ENSCCRG00000014149) #33	mea1 (ENSCCRG00000014142)	ppp2r5d (ENSCCRG00000017599)	ENSCCRG00000076445 #29	ENSCCRG00000041623	ENSCCRG00000064864	ENSCCRG00000032904	ENSCCRG00000006858 #34	SYNDIG1 (ENSCCRG00000009239)	ENSCCRG00000066381	apmap (ENSCCRG00000078269)	si:zfos-1056e6.1 (ENSCCRG00000066192)
Common carp reference	MODERN SPECIES	18	ENSCCRG00000072223	pkdcca (ENSCCRG00000053568)	prph2b (ENSCCRG00000066421)	ENSCCRG00000078898	ENSCCRG00000027386	ENSCCRG00000079610	prkn (ENSCCRG00000034834)	ENSCCRG00000053169	ENSCCRG00000054522	ENSCCRG00000074474	ENSCCRG00000058357	ENSCCRG00000060502	ENSCCRG00000072209	ENSCCRG00000043120	ncoa4 (ENSCCRG00000025315)	yipf3 (ENSCCRG00000014201) #22	ENSCCRG00000025345 #23	ENSCCRG00000025346	DLK2 (ENSCCRG00000075423) #25	mea1 (ENSCCRG00000032060)	ppp2r5d (ENSCCRG00000013598)	ENSCCRG00000053139 #29	ENSCCRG00000032909	ENSCCRG00000006806	ENSCCRG00000009151 #34	SYNDIG1 (ENSCCRG00000052830)	ENSCCRG00000043207	APMAP (ENSCCRG00000044787)	ppm1g (ENSCCRG00000023864)	dld (ENSCCRG00000063931)	phf10 (ENSCCRG00000038504)
Characiphysae	ANCESTRAL SPECIES	92	ENSGT00990000203619.A.b.b.b.a.e.k.a	ENSGT00990000203619.A.b.b.b.a.e.k.b	ENSGT00940000159658.b.b	ENSGT00940000154815.b.b	ENSGT00390000003039	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00730000112471	ENSGT00390000001094	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290.c	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000177578	ENSGT00940000158427	ENSGT00530000063168.b
Channel catfish	MODERN SPECIES	22	Hcar2 (ENSIPUG00000010473)	kcng3 (ENSIPUG00000010483)	COX7R (ENSIPUG00000010503)	ENSIPUG00000010529	eml4 (ENSIPUG00000010577)	ENSIPUG00000010820	PKDCC (ENSIPUG00000010826)	prph2b (ENSIPUG00000010856)	UBR2 (ENSIPUG00000010872)	ENSIPUG00000010942	prkn (ENSIPUG00000010969)	qki (ENSIPUG00000012637)	ENSIPUG00000012656	ENSIPUG00000012658	ncoa4 (ENSIPUG00000012683)	yipf3 (ENSIPUG00000012701) #22	lrrc73 (ENSIPUG00000012719) #23	ENSIPUG00000012745	dlk2 (ENSIPUG00000012767) #25	dnph1 (ENSIPUG00000012772) #33	dnph1 (ENSIPUG00000012781) #33	MEA1 (ENSIPUG00000012786)	ppp2r5d (ENSIPUG00000012800)	ENSIPUG00000012911 #29	ENSIPUG00000012933	CUL7 (ENSIPUG00000012975) #34	syndig1 (ENSIPUG00000013034)	ENSIPUG00000013075	apmap (ENSIPUG00000013146)	si:zfos-1056e6.1 (ENSIPUG00000013185)	ppm1g (ENSIPUG00000013217)
Characiphysae_b	ANCESTRAL SPECIES	91	ENSGT00990000203619.A.b.b.b.a.e.k.a	ENSGT00990000203619.A.b.b.b.a.e.k.b	ENSGT00940000159658.b.b	ENSGT00940000154815.b.b	ENSGT00390000003039	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00730000112471	ENSGT00390000001094	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290.c	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000177578	ENSGT00940000158427	ENSGT00530000063168.b
Electric eel	MODERN SPECIES	61	ENSEEEG00000010759	OXER1 (ENSEEEG00000010760)	OXER1 (ENSEEEG00000010762)	KCNG3 (ENSEEEG00000010765)	ENSEEEG00000010766	EML4 (ENSEEEG00000010769)	pkdcca (ENSEEEG00000010780)	prph2b (ENSEEEG00000010783)	UBR2 (ENSEEEG00000010888)	prkn (ENSEEEG00000012670)	QKI (ENSEEEG00000012672)	ENSEEEG00000012674	ENSEEEG00000012676	ENSEEEG00000012679	ncoa4 (ENSEEEG00000012695)	yipf3 (ENSEEEG00000012702) #22	LRRC73 (ENSEEEG00000012721) #23	ENSEEEG00000012740	DLK2 (ENSEEEG00000012815) #25	dnph1 (ENSEEEG00000012816) #33	mea1 (ENSEEEG00000012817)	ppp2r5d (ENSEEEG00000012859)	ENSEEEG00000015045 #29	CUL7 (ENSEEEG00000015057) #34	SYNDIG1 (ENSEEEG00000015099)	ENSEEEG00000015101	apmap (ENSEEEG00000015104)	ppm1g (ENSEEEG00000015107)	fam120b (ENSEEEG00000015112)	dld (ENSEEEG00000015115)	phf10 (ENSEEEG00000015121)
Characoidei	ANCESTRAL SPECIES	85	ENSGT00990000203619.A.b.b.b.a.e.k.a	ENSGT00990000203619.A.b.b.b.a.e.k.b	ENSGT00940000159658.b.b	ENSGT00940000154815.b.b	ENSGT00390000003039	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00730000112471	ENSGT00390000001094	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290.c	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000177578	ENSGT00940000158427	ENSGT00530000063168.b
Red-bellied piranha	MODERN SPECIES	15	ENSPNAG00000002572	KCNG3 (ENSPNAG00000004758)	COX7A2L (ENSPNAG00000002563)	ENSPNAG00000013111	EML4 (ENSPNAG00000013082)	pkdcca (ENSPNAG00000002522)	prph2b (ENSPNAG00000013015)	UBR2 (ENSPNAG00000013002)	ENSPNAG00000002457	prkn (ENSPNAG00000002443)	ENSPNAG00000012835	QKI (ENSPNAG00000002418)	ENSPNAG00000006947	ENSPNAG00000012795	ncoa4 (ENSPNAG00000012778)	yipf3 (ENSPNAG00000012759) #22	LRRC73 (ENSPNAG00000012721) #23	ENSPNAG00000012692	DLK2 (ENSPNAG00000012670) #25	dnph1 (ENSPNAG00000012654) #33	mea1 (ENSPNAG00000012647)	ppp2r5d (ENSPNAG00000012632)	ENSPNAG00000012550 #29	ENSPNAG00000012423	CUL7 (ENSPNAG00000002223) #34	SYNDIG1 (ENSPNAG00000012274)	ENSPNAG00000012252	apmap (ENSPNAG00000002173)	si:zfos-1056e6.1 (ENSPNAG00000012232)	ppm1g (ENSPNAG00000012199)	fam120b (ENSPNAG00000012134)
Mexicana tetra	MODERN SPECIES	17	OXER1 (ENSAMXG00000015045)	KCNG3 (ENSAMXG00000015014)	COX7A2L (ENSAMXG00000029555)	ENSAMXG00000043124	EML4 (ENSAMXG00000005023)	ENSAMXG00000044011	pkdcca (ENSAMXG00000038060)	prph2b (ENSAMXG00000035606)	UBR2 (ENSAMXG00000015852)	ENSAMXG00000015836	prkn (ENSAMXG00000015822)	ENSAMXG00000031914	QKI (ENSAMXG00000015808)	ENSAMXG00000041757	ncoa4 (ENSAMXG00000015735)	yipf3 (ENSAMXG00000038727) #22	LRRC73 (ENSAMXG00000015706) #23	ENSAMXG00000015682	DLK2 (ENSAMXG00000043523) #25	dnph1 (ENSAMXG00000015630) #33	mea1 (ENSAMXG00000015611)	ppp2r5d (ENSAMXG00000015584)	ENSAMXG00000043989 #29	ENSAMXG00000044073	mrps6 (ENSAMXG00000026285)	psap (ENSAMXG00000015025)	abcg2c (ENSAMXG00000015075)	SLC29A3 (ENSAMXG00000034120) ##10	c1d (ENSAMXG00000043212)	ENSAMXG00000039404	ENSAMXG00000036122
Euteleosteomorpha	ANCESTRAL SPECIES	33	ENSGT00390000013008	ENSGT00390000010899.a.b.b.a	ENSGT00990000203619.A.b.b.b.a.e	ENSGT00940000159658.b.b	ENSGT00940000154815.b.b	ENSGT00390000003039	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793
Acanthomorphata	ANCESTRAL SPECIES	93					ENSGT00940000159658.a.a	ENSGT00940000154815.b.b	ENSGT00390000003039	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793	ENSGT01100000263540.A.a
Euacanthomorphacea	ANCESTRAL SPECIES	60							ENSGT00940000158434	ENSGT00390000003039	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793
Pinecone sodierfish	MODERN SPECIES	6	tspan14 (ENSMMDG00005011047)	EML4 (ENSMMDG00005008132)	ENSMMDG00005008033	KCNG3 (ENSMMDG00005008032)	pkdcca (ENSMMDG00005008029)	prph2b (ENSMMDG00005008020)	UBR2 (ENSMMDG00005006039)	ENSMMDG00005005958	ENSMMDG00005005955	ENSMMDG00005005952	prkn (ENSMMDG00005005950)	ENSMMDG00005005947	QKI (ENSMMDG00005005941)	ENSMMDG00005005935	ncoa4 (ENSMMDG00005005929)	yipf3 (ENSMMDG00005005553) #22	dnph1 (ENSMMDG00005005552) #33	ENSMMDG00005005548	ENSMMDG00005005545	DLK2 (ENSMMDG00005005539) #25	LRRC73 (ENSMMDG00005005537) #23	ENSMMDG00005018825	ppp2r5d (ENSMMDG00005018729)	ENSMMDG00005018716 #29	CUL7 (ENSMMDG00005018677) #34	SYNDIG1 (ENSMMDG00005018663)	CST7 (ENSMMDG00005018660)	apmap (ENSMMDG00005018655)	ENSMMDG00005018653	acss1 (ENSMMDG00005018619)	ENSMMDG00005018606
Percomorphaceae	ANCESTRAL SPECIES	45							ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793
Tiger tail seahorse	MODERN SPECIES	512	akt3a (ENSHCOG00000002340)	zbtb18 (ENSHCOG00000002345)	adss2 (ENSHCOG00000002364)	slc29a1a (ENSHCOG00000002391) #10	atl2 (ENSHCOG00000002418)	olig3 (ENSHCOG00000002447)	ENSHCOG00000002461	ENSHCOG00000002474 #29	ppp2r5d (ENSHCOG00000002595)	mea1 (ENSHCOG00000002628)	ENSHCOG00000002634	EML4 (ENSHCOG00000002665)	tspan14 (ENSHCOG00000002685)	prph2b (ENSHCOG00000002689)	ncoa4 (ENSHCOG00000002698)	yipf3 (ENSHCOG00000002709) #22	dnph1 (ENSHCOG00000002717) #33	ENSHCOG00000002739
Percomorphaceae_B	ANCESTRAL SPECIES	4				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a
Ovalentaria	ANCESTRAL SPECIES	18				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000154411	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a
Atherinomorphae	ANCESTRAL SPECIES	41					ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT01030000236263	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT01040000241272	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a
Oryzias	ANCESTRAL SPECIES	6	ENSGT00940000155790	ENSGT00940000155560.k.c	ENSGT00940000155560.l	ENSGT00390000005203	ENSGT00940000156754.a.a	ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT01040000241272	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000160793
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00940000154711.a.a	ENSGT00940000155790	ENSGT00940000155560.l	ENSGT00390000005203	ENSGT00940000156754.a.a	ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT01040000241272	ENSGT00390000000614 #29	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000160793	ENSGT01100000263540.A.a
Javanese ricefish	MODERN SPECIES	6	ENSOJAG00000012973	ENSOJAG00000012912	ENSOJAG00000012898	ENSOJAG00000012794	ENSOJAG00000012768	ENSOJAG00000012753	ENSOJAG00000012745	EML4 (ENSOJAG00000010190)	tspan14 (ENSOJAG00000009951)	KCNG3 (ENSOJAG00000009932)	prph2b (ENSOJAG00000009923)	ENSOJAG00000009844	prkn (ENSOJAG00000009769)	ENSOJAG00000009756	ncoa4 (ENSOJAG00000009677)	yipf3 (ENSOJAG00000009663) #22	dnph1 (ENSOJAG00000009647) #33	ENSOJAG00000009635	ENSOJAG00000009601 #25	LRRC73 (ENSOJAG00000009578) #23	mea1 (ENSOJAG00000009565)	ppp2r5d (ENSOJAG00000009323)	ENSOJAG00000009253 #29	ENSOJAG00000009229	SYNDIG1 (ENSOJAG00000007544)	CST7 (ENSOJAG00000007531)	apmap (ENSOJAG00000007500)	ENSOJAG00000007489	ENSOJAG00000007450	vsx1 (ENSOJAG00000007405)	AIFM2 (ENSOJAG00000007164)
Indian medaka	MODERN SPECIES	27	ENSOMEG00000017459	ENSOMEG00000017540	cep76 (ENSOMEG00000017644)	id4 (ENSOMEG00000017701)	ENSOMEG00000017741	ENSOMEG00000017755	EML4 (ENSOMEG00000017876)	tspan14 (ENSOMEG00000017924)	KCNG3 (ENSOMEG00000017940)	prph2b (ENSOMEG00000017960)	UBR2 (ENSOMEG00000020662)	ENSOMEG00000021681	prkn (ENSOMEG00000021728)	ENSOMEG00000021741	ncoa4 (ENSOMEG00000021751)	yipf3 (ENSOMEG00000021759) #22	dnph1 (ENSOMEG00000021767) #33	ENSOMEG00000021792	DLK2 (ENSOMEG00000021843) #25	LRRC73 (ENSOMEG00000021865) #23	mea1 (ENSOMEG00000021885)	ppp2r5d (ENSOMEG00000021899)	ENSOMEG00000021912	ENSOMEG00000021957 #29	ENSOMEG00000022031	CUL7 (ENSOMEG00000022216) #34	SYNDIG1 (ENSOMEG00000022278)	CST7 (ENSOMEG00000022297)	apmap (ENSOMEG00000022324)	vsx1 (ENSOMEG00000022331)	entpd6 (ENSOMEG00000022360)
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00940000161285.a	ENSGT00390000016158	ENSGT00940000164014.a.a	ENSGT00940000155560.l	ENSGT00390000005203	ENSGT00940000156754.a.a	ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000160793	ENSGT01100000263540.A.a	ENSGT00390000004582.h
Japanese Medaka HdrR	MODERN SPECIES	6	ENSORLG00000023819	ENSORLG00000022583	ENSORLG00000024904	ENSORLG00000029935	ENSORLG00000025158	ENSORLG00000003462	EML4 (ENSORLG00000003456)	tspan14 (ENSORLG00000003423)	KCNG3 (ENSORLG00000003367)	ENSORLG00000003361	UBR2 (ENSORLG00000003350)	ENSORLG00000025354	prkn (ENSORLG00000029510)	ENSORLG00000026680	ncoa4 (ENSORLG00000003269)	yipf3 (ENSORLG00000003250) #22	ENSORLG00000029764	ENSORLG00000026021	dnph1 (ENSORLG00000003216) #33	ENSORLG00000003209	ENSORLG00000003193 #25	LRRC73 (ENSORLG00000003187) #23	mea1 (ENSORLG00000003180)	ppp2r5d (ENSORLG00000003171)	ENSORLG00000026208 #29	ENSORLG00000003131	ENSORLG00000023888	CUL7 (ENSORLG00000003116) #34	SYNDIG1 (ENSORLG00000003047)	CST7 (ENSORLG00000024898)	apmap (ENSORLG00000003030)
Cyprinodontiformes	ANCESTRAL SPECIES	37	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT01040000241272	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT01030000236263	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00440000039984.a	ENSGT00940000160277	ENSGT00940000178738	ENSGT00940000159658.a.a	ENSGT00940000159235	ENSGT00940000158434	ENSGT00390000003039
Cyprinodontoidei	ANCESTRAL SPECIES	40	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT01040000241272	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT01030000236263	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00440000039984.a	ENSGT00940000160277	ENSGT00940000178738	ENSGT00940000159658.a.a	ENSGT00940000159235	ENSGT00940000158434	ENSGT00390000003039
NAME_4	ANCESTRAL SPECIES	245								ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00440000039984.a	ENSGT00940000160277	ENSGT00940000178738	ENSGT00940000159658.a.a	ENSGT00940000159235	ENSGT00940000158434	ENSGT00390000003039
Sheepshead minnow	MODERN SPECIES	1193					ENSCVAG00000008895	ENSCVAG00000008920 #34	ENSCVAG00000008951 #34	prph2b (ENSCVAG00000008955)	UBR2 (ENSCVAG00000009051)	ENSCVAG00000009108	ENSCVAG00000009118	ENSCVAG00000009136	ENSCVAG00000009140	ENSCVAG00000000253	ncoa4 (ENSCVAG00000009157)	yipf3 (ENSCVAG00000009195) #22	dnph1 (ENSCVAG00000009220) #33	apmap (ENSCVAG00000009289)	ENSCVAG00000009303	KCNG3 (ENSCVAG00000009307)	tspan14 (ENSCVAG00000009338)	EML4 (ENSCVAG00000009497)	ENSCVAG00000009511
Mummichog	MODERN SPECIES	1319															ncoa4 (ENSFHEG00000009434)	yipf3 (ENSFHEG00000009472) #22	dnph1 (ENSFHEG00000009514) #33
Poeciliinae	ANCESTRAL SPECIES	36	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT01030000236263	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00440000039984.a	ENSGT00940000160277	ENSGT00940000159235	ENSGT00940000158434	ENSGT00390000003039	ENSGT00940000166655
Poecilia	ANCESTRAL SPECIES	59	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954.qb.b #34	ENSGT00940000153954.qb.a #34	ENSGT00950000183147.B	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT01030000236263	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00440000039984.a	ENSGT00940000160277	ENSGT00940000159235	ENSGT00940000158434	ENSGT00390000003039	ENSGT00940000166655
NAME_6	ANCESTRAL SPECIES	205	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954.qb.b #34	ENSGT00940000153954.qb.a #34	ENSGT00950000183147.B	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT01030000236263	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00440000039984.a	ENSGT00940000160277
Sailfin molly	MODERN SPECIES	2139											ENSPLAG00000018401	ENSPLAG00000018382	ENSPLAG00000018370	ENSPLAG00000018358	ncoa4 (ENSPLAG00000018344)	yipf3 (ENSPLAG00000018278) #22	dnph1 (ENSPLAG00000018237) #33	ENSPLAG00000018230	ENSPLAG00000018215
Amazon molly	MODERN SPECIES	930						ENSPFOG00000003324	ENSPFOG00000003358 #34	ENSPFOG00000003479	prph2b (ENSPFOG00000003489)	UBR2 (ENSPFOG00000003667)	ENSPFOG00000005389	prkn (ENSPFOG00000005450)	ENSPFOG00000023281	ENSPFOG00000005622	ncoa4 (ENSPFOG00000005630)	yipf3 (ENSPFOG00000005709) #22	dnph1 (ENSPFOG00000005821) #33	apmap (ENSPFOG00000005885)	ENSPFOG00000005999
Guppy	MODERN SPECIES	445	LRRC73 (ENSPREG00000013444) #23	mea1 (ENSPREG00000013461)	ENSPREG00000013474	ENSPREG00000013514 #29	ENSPREG00000013569	ENSPREG00000013579	ENSPREG00000013602 #34	ENSPREG00000013619 #34	ENSPREG00000013633	prph2b (ENSPREG00000013649)	ENSPREG00000013668	ENSPREG00000013695	ENSPREG00000013710	ENSPREG00000013726	ncoa4 (ENSPREG00000013735)	yipf3 (ENSPREG00000013751) #22	dnph1 (ENSPREG00000013768) #33	apmap (ENSPREG00000013778)	ENSPREG00000013796	ENSPREG00000013811 #33	tspan14 (ENSPREG00000013816)	ENSPREG00000013824	ENSPREG00000013852	ENSPREG00000013870
Platyfish	MODERN SPECIES	14	ENSXMAG00000025290 #34	ENSXMAG00000022911 #34	ENSXMAG00000023176	prph2b (ENSXMAG00000016497)	ENSXMAG00000029313	UBR2 (ENSXMAG00000016386)	ENSXMAG00000021413	prkn (ENSXMAG00000003878)	ENSXMAG00000028431	ENSXMAG00000028741	ENSXMAG00000027850	ENSXMAG00000025345	ENSXMAG00000024034	ncoa4 (ENSXMAG00000002456)	ENSXMAG00000023212	yipf3 (ENSXMAG00000022186) #22	ENSXMAG00000028806	dnph1 (ENSXMAG00000025860) #33	apmap (ENSXMAG00000009084)	ENSXMAG00000009082	tspan14 (ENSXMAG00000009071)	EML4 (ENSXMAG00000009050)	ENSXMAG00000009048	ENSXMAG00000009019	marchf5 (ENSXMAG00000007675)	cpeb3 (ENSXMAG00000007652)	ENSXMAG00000025492	CCNJ (ENSXMAG00000007625)	blnk (ENSXMAG00000025725)	dntt (ENSXMAG00000007601)	ENSXMAG00000019828
Aplocheiloidei	ANCESTRAL SPECIES	128		ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00440000039984.a	ENSGT00940000178738	ENSGT00940000159658.a.a	ENSGT00940000159235	ENSGT00940000158434
Mangrove rivulus	MODERN SPECIES	886																yipf3 (ENSKMAG00000005842) #22	dnph1 (ENSKMAG00000005810) #33	apmap (ENSKMAG00000005770)
Turquoise killifish	MODERN SPECIES	22											ENSNFUG00015015528	prkn (ENSNFUG00015015478)	ENSNFUG00015015464	ENSNFUG00015015457	ncoa4 (ENSNFUG00015015451)	yipf3 (ENSNFUG00015015244) #22	DNPH1 (ENSNFUG00015015168) #33	apmap (ENSNFUG00015015131)	ENSNFUG00015015126	KCNG3 (ENSNFUG00015015114)	ENSNFUG00015015107	tspan14 (ENSNFUG00015015088)	ENSNFUG00015015070
Ovalentaria_B	ANCESTRAL SPECIES	7				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a	ENSGT00940000160793
Pomacentridae	ANCESTRAL SPECIES	131					ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00390000008403	ENSGT00730000112471	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000154411	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a	ENSGT00940000160793	ENSGT01100000263540.A.a
Pomacentridae_A	ANCESTRAL SPECIES	135		ENSGT00660000095541.a.a	ENSGT00390000013968	ENSGT00940000166409	ENSGT00940000167655	ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000154411
Amphiprion	ANCESTRAL SPECIES	255																ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954.lb #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a
Clown anemonefish	DUPLICATION
Clown anemonefish	MODERN SPECIES	2377																yipf3 (ENSAOCG00000012307) #22	dnph1 (ENSAOCG00000012338) #33
Clown anemonefish	MODERN SPECIES	191																yipf3 (ENSAOCG00000012927) #22
Orange clownfish	MODERN SPECIES	12															serpine3 (ENSAPEG00000017283)	yipf3 (ENSAPEG00000017176) #22	dnph1 (ENSAPEG00000017152) #33	ENSAPEG00000017111	DLK2 (ENSAPEG00000017072) #25	ENSAPEG00000017052	LRRC73 (ENSAPEG00000017025) #23	mea1 (ENSAPEG00000016996)	ENSAPEG00000016985	ppp2r5d (ENSAPEG00000016905)	ENSAPEG00000016872 #29	ENSAPEG00000016851	ENSAPEG00000016822 #34	ENSAPEG00000016804	ENSAPEG00000016787 #34	SYNDIG1 (ENSAPEG00000016767)	ENSAPEG00000016731
Spiny chromis	MODERN SPECIES	1724													prkn (ENSAPOG00000018969)	ncoa4 (ENSAPOG00000018954)	ENSAPOG00000018836	yipf3 (ENSAPOG00000018819) #22	dnph1 (ENSAPOG00000018781) #33	ENSAPOG00000018750
Bicolor damselfish	MODERN SPECIES	2753																yipf3 (ENSSPAG00000020173) #22	dnph1 (ENSSPAG00000020160) #33
Cichlidae	ANCESTRAL SPECIES	38						ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a	ENSGT00940000160793
Midas cichlid	MODERN SPECIES	9														QKI (ENSACIG00000004082)	ncoa4 (ENSACIG00000003970)	yipf3 (ENSACIG00000003945) #22	dnph1 (ENSACIG00000003905) #33	ENSACIG00000003876	ENSACIG00000003848 #25	LRRC73 (ENSACIG00000003832) #23	mea1 (ENSACIG00000003821)	ppp2r5d (ENSACIG00000003769)	ENSACIG00000003759	ENSACIG00000003738 #29	ENSACIG00000003653 #34	ENSACIG00000003621 #34	SYNDIG1 (ENSACIG00000003603)	CST7 (ENSACIG00000003585)	apmap (ENSACIG00000003569)	acss1 (ENSACIG00000003543)	ENSACIG00000003515
Pseudocrenilabrinae	ANCESTRAL SPECIES	32						ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000181480	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a	ENSGT00940000160793
Nile tilapia	MODERN SPECIES	4	ENSONIG00000027356	ENSONIG00000040198	ENSONIG00000040724	ENSONIG00000037395	ENSONIG00000006963	tspan14 (ENSONIG00000006961)	ENSONIG00000040039	KCNG3 (ENSONIG00000038229)	prph2b (ENSONIG00000032901)	ENSONIG00000039968	UBR2 (ENSONIG00000007141)	prkn (ENSONIG00000007137)	ENSONIG00000007133	ENSONIG00000038915	ncoa4 (ENSONIG00000007129)	yipf3 (ENSONIG00000007123) #22	ENSONIG00000038571	ENSONIG00000007118	ENSONIG00000007116 #25	LRRC73 (ENSONIG00000007112) #23	mea1 (ENSONIG00000039258)	ppp2r5d (ENSONIG00000007102)	ENSONIG00000039687 #29	ENSONIG00000025397	CUL7 (ENSONIG00000007097) #34	SYNDIG1 (ENSONIG00000007096)	CST7 (ENSONIG00000007095)	apmap (ENSONIG00000007089)	ENSONIG00000030606	acss1 (ENSONIG00000007083)	ENSONIG00000007088
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11						ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000181480	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a	ENSGT00940000160793
Lyretail cichlid	MODERN SPECIES	462					ENSNBRG00000008878	EML4 (ENSNBRG00000008919)	tspan14 (ENSNBRG00000009050)	KCNG3 (ENSNBRG00000009076)	prph2b (ENSNBRG00000009087)	UBR2 (ENSNBRG00000009106)	ENSNBRG00000009196	prkn (ENSNBRG00000009234)	ENSNBRG00000009287	ENSNBRG00000009304	ncoa4 (ENSNBRG00000009323)	yipf3 (ENSNBRG00000009353) #22	ENSNBRG00000009389	ENSNBRG00000009416	ENSNBRG00000009456 #25	LRRC73 (ENSNBRG00000009473) #23	mea1 (ENSNBRG00000009492)	ppp2r5d (ENSNBRG00000009510)	ENSNBRG00000009553 #29	ENSNBRG00000009626	ENSNBRG00000009651 #34	ENSNBRG00000009758 #34	SYNDIG1 (ENSNBRG00000009766)	apmap (ENSNBRG00000009783)	ENSNBRG00000009802	ENSNBRG00000009811	vsx1 (ENSNBRG00000009816)
Haplochromini	ANCESTRAL SPECIES	10															ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a	ENSGT00940000160793
Burton s mouthbrooder	MODERN SPECIES	1230															ncoa4 (ENSHBUG00000009500)	yipf3 (ENSHBUG00000009530) #22	dnph1 (ENSHBUG00000009546) #33	ENSHBUG00000009566	ENSHBUG00000009580 #25	LRRC73 (ENSHBUG00000009616) #23
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00940000157593	ENSGT00390000017746	ENSGT00510000047676	ENSGT00940000153168.B	ENSGT00940000153566.b	ENSGT00940000153335.a.b	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b	ENSGT00390000015849	ENSGT00940000163289.b.a.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b.k	ENSGT00390000000614 #29	ENSGT00940000172797	ENSGT00940000170622	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550
P. nyererei	MODERN SPECIES	492	ENSPNYG00000003466	exo1 (ENSPNYG00000003414)	yipf4 (ENSPNYG00000003344)	ncapd3 (ENSPNYG00000002918)	cdk1 (ENSPNYG00000002812)	ctu2 (ENSPNYG00000002790)	RNF166 (ENSPNYG00000002749)	cyp17a1 (ENSPNYG00000002693)	borcs7 (ENSPNYG00000002686)	nt5c2a (ENSPNYG00000002605)	ENSPNYG00000002573	fgf8a (ENSPNYG00000002299)	fbxw4 (ENSPNYG00000002264)	ENSPNYG00000002257	ncoa4 (ENSPNYG00000002178)	yipf3 (ENSPNYG00000002133) #22	dnph1 (ENSPNYG00000002105) #33	ENSPNYG00000002070	ENSPNYG00000002039 #25	LRRC73 (ENSPNYG00000002011) #23	mea1 (ENSPNYG00000001966)
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00510000047676	ENSGT00940000153168.B	ENSGT01030000235521.b	ENSGT00940000153566.b	ENSGT00940000153335.a.b	ENSGT00390000008797.g	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b	ENSGT00390000015849	ENSGT00940000163289.b.a.b	ENSGT00940000164095.a	ENSGT00940000159518.a	ENSGT00390000005029	ENSGT00490000044642.a.a.a.a.a.a.d.a.b.b.d.b.d.b	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b.k	ENSGT00390000000614 #29	ENSGT00940000172797	ENSGT00940000170622	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550
Eastern happy	MODERN SPECIES	4	cdk1 (ENSACLG00000004925)	ENSACLG00000004924	ENSACLG00000004914	ctu2 (ENSACLG00000004899)	RNF166 (ENSACLG00000004886)	cyp17a1 (ENSACLG00000004868)	borcs7 (ENSACLG00000004855)	nt5c2a (ENSACLG00000004818)	slc2a15a (ENSACLG00000004729)	ENSACLG00000004709	fgf8a (ENSACLG00000004676)	fbxw4 (ENSACLG00000004635)	ENSACLG00000004624	ENSACLG00000004598	ncoa4 (ENSACLG00000004547)	yipf3 (ENSACLG00000004518) #22	dnph1 (ENSACLG00000004498) #33	ENSACLG00000004450	ENSACLG00000004316	ENSACLG00000004297 #25	LRRC73 (ENSACLG00000004272) #23	mea1 (ENSACLG00000004254)	ppp2r5d (ENSACLG00000004203)	ENSACLG00000004195	ENSACLG00000004157 #29	ENSACLG00000004135	ENSACLG00000004118 #34	ENSACLG00000004108 #34	SYNDIG1 (ENSACLG00000004089)	CST7 (ENSACLG00000004075)	apmap (ENSACLG00000004058)
Zebra mbuna	MODERN SPECIES	1095														ENSMZEG00005002175	ncoa4 (ENSMZEG00005002183)	yipf3 (ENSMZEG00005002205) #22	dnph1 (ENSMZEG00005002254) #33	ENSMZEG00005002273	ENSMZEG00005002281 #25	LRRC73 (ENSMZEG00005002318) #23	mea1 (ENSMZEG00005002338)	ppp2r5d (ENSMZEG00005002344)	ENSMZEG00005002385	ENSMZEG00005002401	CUL7 (ENSMZEG00005002437) #34	SYNDIG1 (ENSMZEG00005002508)	ENSMZEG00005002540	apmap (ENSMZEG00005002551)	ENSMZEG00005002581	ENSMZEG00005002604	ENSMZEG00005002638
Percomorphaceae_C	ANCESTRAL SPECIES	18				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a
Percomorphaceae_D	ANCESTRAL SPECIES	26				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT01100000263507.E.a.a.a.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a
Anabantaria	ANCESTRAL SPECIES	38					ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT01100000263533.b.a.a.b	ENSGT00940000154411	ENSGT00940000158550
Zig-zag eel	MODERN SPECIES	6	NCKAP1 (ENSMAMG00000022418)	ENSMAMG00000022424	ENSMAMG00000022427	ENSMAMG00000025279	ENSMAMG00000022431	ENSMAMG00000022435	ENSMAMG00000026809	ENSMAMG00000022439	ENSMAMG00000022441	ENSMAMG00000022444	ENSMAMG00000028121	prkn (ENSMAMG00000022445)	ENSMAMG00000027318	ENSMAMG00000026062	ncoa4 (ENSMAMG00000022452)	yipf3 (ENSMAMG00000022454) #22	ENSMAMG00000022460 #33	ENSMAMG00000022464	ENSMAMG00000022467 #23	ENSMAMG00000022469 #25	mea1 (ENSMAMG00000022473)	ppp2r5d (ENSMAMG00000022474)	ENSMAMG00000022480 #29	ENSMAMG00000022485	SYNDIG1 (ENSMAMG00000022489)	CST7 (ENSMAMG00000022492)	APMAP (ENSMAMG00000022493)	ENSMAMG00000022502	ACSS1 (ENSMAMG00000022509)	vsx1 (ENSMAMG00000022512)	ENTPD6 (ENSMAMG00000022517)
Anabantoidei	ANCESTRAL SPECIES	35							ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT01100000263533.b.a.a.b	ENSGT01100000263491.a.a.c.b	ENSGT00940000154411	ENSGT00940000158550
Siamese fighting fish	MODERN SPECIES	6						prph2b (ENSBSLG00000023017)	KCNG3 (ENSBSLG00000023011)	tspan14 (ENSBSLG00000022977)	EML4 (ENSBSLG00000022446)	ENSBSLG00000022324	ENSBSLG00000021853	tspan14 (ENSBSLG00000021784)	prph2b (ENSBSLG00000021704)	prkn (ENSBSLG00000021447)	ncoa4 (ENSBSLG00000021399)	yipf3 (ENSBSLG00000021247) #22	dnph1 (ENSBSLG00000021180) #33	ENSBSLG00000021094	ENSBSLG00000020988 #25	LRRC73 (ENSBSLG00000020944) #23	mea1 (ENSBSLG00000020540)	ppp2r5d (ENSBSLG00000019953)	ENSBSLG00000019795	CUL7 (ENSBSLG00000019049) #34	SYNDIG1 (ENSBSLG00000019001)	CST7 (ENSBSLG00000018971)	apmap (ENSBSLG00000018848)	ENSBSLG00000018771	acss1 (ENSBSLG00000017444)	ENSBSLG00000017229	vsx1 (ENSBSLG00000017100)
Climbing perch	MODERN SPECIES	6							ENSATEG00000022754	ENSATEG00000022738	ENSATEG00000022728	ENSATEG00000022722	ENSATEG00000022672	prkn (ENSATEG00000022611)	ENSATEG00000028192	ENSATEG00000022584	ncoa4 (ENSATEG00000022558)	yipf3 (ENSATEG00000022524) #22	ENSATEG00000022504 #33	ENSATEG00000025538	ENSATEG00000022466	ENSATEG00000022427 #25	ENSATEG00000022394	ENSATEG00000022373 #23	mea1 (ENSATEG00000022363)	ENSATEG00000022337	ENSATEG00000022319	ENSATEG00000022253 #34	SYNDIG1 (ENSATEG00000022241)	CST7 (ENSATEG00000022225)	APMAP (ENSATEG00000022167)	ACSS1 (ENSATEG00000022038)	ENSATEG00000022064
Carangaria	ANCESTRAL SPECIES	33				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000155310.a.b	ENSGT00390000011034	ENSGT00910000144630.a	ENSGT00950000183075.a.a.a.a	ENSGT00940000157303.e	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000154411	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a
Pleuronectoidei	ANCESTRAL SPECIES	73							ENSGT00940000159235	ENSGT00940000158434	ENSGT00390000003039	ENSGT00940000159658.a.a	ENSGT00390000011034	ENSGT00950000183075.a.a.a.a	ENSGT00940000157303.e	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793	ENSGT01100000263540.A.a	ENSGT00390000018613.a	ENSGT00950000183148.b.b
Turbot	MODERN SPECIES	6										ENSSMAG00000033407	ENSSMAG00000006576	ENSSMAG00000006759	ENSSMAG00000006806	ENSSMAG00000007047	ncoa4 (ENSSMAG00000007072)	yipf3 (ENSSMAG00000007107) #22	ENSSMAG00000007129 #33	ENSSMAG00000007149	ENSSMAG00000007190 #25	ENSSMAG00000007204 #23	mea1 (ENSSMAG00000007230)	ENSSMAG00000007248	ENSSMAG00000037461 #29	ENSSMAG00000007361	CST7 (ENSSMAG00000007379)	APMAP (ENSSMAG00000007388)	ACSS1 (ENSSMAG00000007425)	vsx1 (ENSSMAG00000007488)	ENTPD6 (ENSSMAG00000007560)	ENSSMAG00000007617	abhd12 (ENSSMAG00000007585)
Tongue sole	MODERN SPECIES	3	ENSCSEG00000003932	ENSCSEG00000003946	rtkn2 (ENSCSEG00000003956)	ENSCSEG00000003976	ENSCSEG00000003978	ENSCSEG00000003981	EML4 (ENSCSEG00000003987)	ENSCSEG00000003996	KCNG3 (ENSCSEG00000003997)	prkn (ENSCSEG00000004001)	UBR2 (ENSCSEG00000004011)	prph2b (ENSCSEG00000004046)	prph2b (ENSCSEG00000004051)	ncoa4 (ENSCSEG00000004058)	ENSCSEG00000004072	yipf3 (ENSCSEG00000004074) #22	ENSCSEG00000004081	ENSCSEG00000004092	ENSCSEG00000004107	ENSCSEG00000004119	ENSCSEG00000004128	ENSCSEG00000004134	ENSCSEG00000004138	elovl6l (ENSCSEG00000004155)	elovl6l (ENSCSEG00000004158)	ENSCSEG00000004163	nfkb2 (ENSCSEG00000004183)	sncga (ENSCSEG00000004197)	shld2 (ENSCSEG00000004202)	glud1a (ENSCSEG00000004209)	ENSCSEG00000004222
Carangaria_A	ANCESTRAL SPECIES	76				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000155310.a.b	ENSGT00390000011034	ENSGT00910000144630.a	ENSGT00950000183075.a.a.a.a	ENSGT00940000157303.e	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT01100000263507.E.a.a.a.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a
Seriola	ANCESTRAL SPECIES	98																ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000157467.v	ENSGT00940000154411	ENSGT00940000158550
Greater amberjack	MODERN SPECIES	55	ENSSDUG00000005430	ENSSDUG00000005414	cyp26c1 (ENSSDUG00000005393)	ENSSDUG00000005292	ENSSDUG00000005267	ppp1r3ca (ENSSDUG00000005259)	HECTD2 (ENSSDUG00000005226)	ENSSDUG00000005211	pcgf5a (ENSSDUG00000005188)	ENSSDUG00000005170	ANKRD1 (ENSSDUG00000005146)	ENSSDUG00000005097	ENSSDUG00000004734	HTR7 (ENSSDUG00000004660)	ARFGEF3 (ENSSDUG00000004588)	yipf3 (ENSSDUG00000004560) #22	dnph1 (ENSSDUG00000004542) #33	ENSSDUG00000004501	ENSSDUG00000004452 #25	LRRC73 (ENSSDUG00000004427) #23	mea1 (ENSSDUG00000004418)	ppp2r5d (ENSSDUG00000004373)	ENSSDUG00000004358 #29	ENSSDUG00000004331	CUL7 (ENSSDUG00000004222) #34	SYNDIG1 (ENSSDUG00000004206)	CST7 (ENSSDUG00000004191)	apmap (ENSSDUG00000004176)	acss1 (ENSSDUG00000004130)	ENSSDUG00000004089	vsx1 (ENSSDUG00000004078)
Yellowtail amberjack	MODERN SPECIES	1903																yipf3 (ENSSLDG00000000319) #22	dnph1 (ENSSLDG00000000377) #33
Barramundi perch	MODERN SPECIES	646													KCNG3 (ENSLCAG00010006272)	ENSLCAG00010006277	ncoa4 (ENSLCAG00010006292)	yipf3 (ENSLCAG00010006306) #22	dnph1 (ENSLCAG00010006316) #33	ENSLCAG00010006320	DLK2 (ENSLCAG00010006331) #25	LRRC73 (ENSLCAG00010006343) #23	mea1 (ENSLCAG00010006346)	ENSLCAG00010006350
Eupercaria	ANCESTRAL SPECIES	15				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000155310.a.b	ENSGT00390000011034	ENSGT00910000144630.a	ENSGT00950000183075.a.a.a.a	ENSGT00940000157303.e	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00940000154866.B.a	ENSGT00940000153566.b	ENSGT00940000163454.a.a.a.b.a.a.b.a.a	ENSGT00940000155989.e	ENSGT01010000222287.B.a.a.a.a.a.a	ENSGT00530000064150	ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000159658.a.a	ENSGT00390000011034	ENSGT00950000183075.a.a.a.a	ENSGT00940000157303.e	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793	ENSGT01100000263540.A.a	ENSGT00390000018613.a
Fugu	MODERN SPECIES	16	ENSTRUG00000001097	ENSTRUG00000028338	ENSTRUG00000032084	ENSTRUG00000007823	HTR7 (ENSTRUG00000007675)	ARFGEF3 (ENSTRUG00000007336)	ENSTRUG00000022034	EML4 (ENSTRUG00000006655)	tspan14 (ENSTRUG00000006403)	KCNG3 (ENSTRUG00000006356)	prkn (ENSTRUG00000006244)	UBR2 (ENSTRUG00000004807)	prph2b (ENSTRUG00000004626)	ENSTRUG00000024222	ncoa4 (ENSTRUG00000003924)	yipf3 (ENSTRUG00000003502) #22	dnph1 (ENSTRUG00000003415) #33	ENSTRUG00000003134	ENSTRUG00000003130 #25	LRRC73 (ENSTRUG00000003016) #23	mea1 (ENSTRUG00000002736)	ENSTRUG00000020191	ENSTRUG00000031439 #29	CUL7 (ENSTRUG00000001875) #34	SYNDIG1 (ENSTRUG00000003768)	CST7 (ENSTRUG00000027365)	apmap (ENSTRUG00000003885)	acss1 (ENSTRUG00000004153)	vsx1 (ENSTRUG00000004377)	entpd6 (ENSTRUG00000007946)	ENSTRUG00000030656
Tetraodon	MODERN SPECIES	9	ENSTNIG00000013398	ENSTNIG00000013397	ENSTNIG00000013396	ENSTNIG00000013395	ENSTNIG00000013394	HTR7 (ENSTNIG00000013393)	ARFGEF3 (ENSTNIG00000013392)	EML4 (ENSTNIG00000013391)	tspan14 (ENSTNIG00000013390)	KCNG3 (ENSTNIG00000013389)	prkn (ENSTNIG00000013388)	UBR2 (ENSTNIG00000013387)	prph2b (ENSTNIG00000013386)	ENSTNIG00000013385	ncoa4 (ENSTNIG00000013384)	yipf3 (ENSTNIG00000013383) #22	dnph1 (ENSTNIG00000013382) #33	ENSTNIG00000013381	DLK2 (ENSTNIG00000013380) #25	LRRC73 (ENSTNIG00000013379) #23	mea1 (ENSTNIG00000013378)	ppp2r5d (ENSTNIG00000013377)	ENSTNIG00000013376	ENSTNIG00000013375 #29	CUL7 (ENSTNIG00000013374) #34	CST7 (ENSTNIG00000013373)	apmap (ENSTNIG00000013372)	acss1 (ENSTNIG00000013371)	ENSTNIG00000013370	vsx1 (ENSTNIG00000013369)	entpd6 (ENSTNIG00000013368)
Eupecaria_A	ANCESTRAL SPECIES	1				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT01100000263520.a.a.b.a.a
Ballan wrasse	MODERN SPECIES	251	fignl1 (ENSLBEG00000023009)	ttl (ENSLBEG00000022981)	ENSLBEG00000022960	EML4 (ENSLBEG00000022841)	tspan14 (ENSLBEG00000022753)	ENSLBEG00000022740	KCNG3 (ENSLBEG00000022725)	QKI (ENSLBEG00000022702)	prkn (ENSLBEG00000022622)	ENSLBEG00000022556	UBR2 (ENSLBEG00000022453)	prph2b (ENSLBEG00000022386)	ENSLBEG00000022330	ENSLBEG00000022301	ncoa4 (ENSLBEG00000022251)	yipf3 (ENSLBEG00000022187) #22	dnph1 (ENSLBEG00000022160) #33	ENSLBEG00000022136
Eupecaria_B	ANCESTRAL SPECIES	3				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00950000183147.B	ENSGT00940000170622	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT01100000263520.a.a.b.a.a
Perciformes	ANCESTRAL SPECIES	49				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000155310.a.b	ENSGT00390000011034	ENSGT00910000144630.a	ENSGT00950000183075.a.a.a.a	ENSGT00940000157303.e	ENSGT00730000112471	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000170622	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34
Perciformes_a	ANCESTRAL SPECIES	113												ENSGT00390000011034	ENSGT00950000183075.a.a.a.a	ENSGT00940000157303.e	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	556																yipf3 (ENSSLUG00000007837) #22	dnph1 (ENSSLUG00000007842) #33	ENSSLUG00000007855
Pike perch	MODERN SPECIES	394								ENSSLUG00000014971	ENSSLUG00000015003	ENSSLUG00000015010	UBR2 (ENSSLUG00000015250)	ENSSLUG00000019566	prph2b (ENSSLUG00000019570)	ENSSLUG00000019579	ncoa4 (ENSSLUG00000019580)	yipf3 (ENSSLUG00000019585) #22	dnph1 (ENSSLUG00000019589) #33	ENSSLUG00000019611
Cottioidei	ANCESTRAL SPECIES	59							ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00390000011034	ENSGT00910000144630.a	ENSGT00950000183075.a.a.a.a	ENSGT00940000157303.e	ENSGT00940000162367.f	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000170622	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00660000095541.a.a	ENSGT00390000013968	ENSGT00940000166409	ENSGT00390000018613.a
Lumpfish	MODERN SPECIES	6					ENSCLMG00005014198	ENSCLMG00005014199	tspan14 (ENSCLMG00005014200)	ENSCLMG00005014202	prkn (ENSCLMG00005014203)	ENSCLMG00005014204	ENSCLMG00005014205	UBR2 (ENSCLMG00005014234)	PRPH2 (ENSCLMG00005015602)	ENSCLMG00005015603	ncoa4 (ENSCLMG00005001362)	yipf3 (ENSCLMG00005001411) #22	dnph1 (ENSCLMG00005001477) #33	ENSCLMG00005001490	DLK2 (ENSCLMG00005001504) #25	LRRC73 (ENSCLMG00005001519) #23	mea1 (ENSCLMG00005001543)	PPP2R5D (ENSCLMG00005001730)	ENSCLMG00005002006	gins1 (ENSCLMG00005002187)	abhd12 (ENSCLMG00005002188)	ENSCLMG00005002189	entpd6 (ENSCLMG00005002190)	ENSCLMG00005002203	vsx1 (ENSCLMG00005002206)	ENSCLMG00005002223	ACSS1 (ENSCLMG00005002247)
Stickleback	MODERN SPECIES	6								ENSGACG00000012414	EML4 (ENSGACG00000012405)	tspan14 (ENSGACG00000012392)	prkn (ENSGACG00000012371)	UBR2 (ENSGACG00000012336)	prph2b (ENSGACG00000012325)	ENSGACG00000012324	ncoa4 (ENSGACG00000012317)	yipf3 (ENSGACG00000012266) #22	DNPH1 (ENSGACG00000012262) #33	ENSGACG00000012257	DLK2 (ENSGACG00000012250) #25	LRRC73 (ENSGACG00000012246) #23	mea1 (ENSGACG00000012242)	ppp2r5d (ENSGACG00000012222)	ENSGACG00000012217 #29	ENSGACG00000012211	ENSGACG00000012206	ENSGACG00000012205	ENSGACG00000012200 #34	ENSGACG00000012187 #34	ninl (ENSGACG00000012168)	gins1 (ENSGACG00000012166)	abhd12 (ENSGACG00000012160)
Eupecaria_C	ANCESTRAL SPECIES	49				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000155310.a.b	ENSGT00390000011034	ENSGT00910000144630.a	ENSGT00950000183075.a.a.a.a	ENSGT00940000157303.e	ENSGT00940000159658.a.a	ENSGT00940000154815.b.b	ENSGT00940000162367.f	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00950000183147.B	ENSGT00940000153954 #34	ENSGT00940000168290	ENSGT00390000000614 #29	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793	ENSGT01100000263540.A.a
Gilthead seabream	MODERN SPECIES	6	ENSSAUG00010016482	ENSSAUG00010016484	ENSSAUG00010016486	ENSSAUG00010016488	ENSSAUG00010016554	tspan14 (ENSSAUG00010023039)	ENSSAUG00010023048	KCNG3 (ENSSAUG00010023049)	ENSSAUG00010023050	ENSSAUG00010023051	QKI (ENSSAUG00010023054)	UBR2 (ENSSAUG00010023072)	prph2b (ENSSAUG00010023415)	ENSSAUG00010023416	ncoa4 (ENSSAUG00010023419)	yipf3 (ENSSAUG00010023423) #22	dnph1 (ENSSAUG00010023426) #33	ENSSAUG00010023428	ENSSAUG00010023429	nfkb2 (ENSSAUG00010023432)	PSD (ENSSAUG00010023468)	ENSSAUG00010023712	elovl6l (ENSSAUG00010023715)	AIFM2 (ENSSAUG00010023717)	ninl (ENSSAUG00010023719)	ENSSAUG00010023720	gins1 (ENSSAUG00010023722)	acss1 (ENSSAUG00010023725)	ENSSAUG00010023727	ENSSAUG00010023728	vsx1 (ENSSAUG00010023729)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	58				ENSGT00390000003039	ENSGT00940000158434	ENSGT00940000159235	ENSGT00940000154815.b.b	ENSGT00940000159658.a.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00940000162367.f	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000001216 #33	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000003256 #23	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00950000183147.B	ENSGT00940000153954 #34	ENSGT00940000168290	ENSGT00390000000614 #29	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793	ENSGT01100000263540.A.a	ENSGT00390000018613.a
European seabass	MODERN SPECIES	159		ENSDLAG00005029623	ENSDLAG00005013738	ENSDLAG00005017883	ENSDLAG00005027096	ENSDLAG00005028633	ENSDLAG00005027461	ENSDLAG00005033924	ENSDLAG00005026771	ENSDLAG00005028826	ENSDLAG00005027265	ENSDLAG00005014533	ENSDLAG00005034910	ENSDLAG00005019223	ncoa4 (ENSDLAG00005019204)	yipf3 (ENSDLAG00005029699) #22	ENSDLAG00005029291 #33	ENSDLAG00005032869	ENSDLAG00005026380	ENSDLAG00005031153	ENSDLAG00005030669 #25	ENSDLAG00005032278	ENSDLAG00005020168 #23	ENSDLAG00005029419	ENSDLAG00005034134	ENSDLAG00005032648	ENSDLAG00005002963	ENSDLAG00005029760 #29	ENSDLAG00005032921 #34	APMAP (ENSDLAG00005017079)	entpd6 (ENSDLAG00005027027)
Large yellow croaker	MODERN SPECIES	27	vsx1 (ENSLCRG00005018882)	acss1 (ENSLCRG00005018801)	ENSLCRG00005018795	ENSLCRG00005018794	apmap (ENSLCRG00005018792)	EML4 (ENSLCRG00005017526)	tspan14 (ENSLCRG00005017512)	KCNG3 (ENSLCRG00005017511)	prph2b (ENSLCRG00005017510)	UBR2 (ENSLCRG00005015223)	prkn (ENSLCRG00005015190)	QKI (ENSLCRG00005015189)	ENSLCRG00005015188	ENSLCRG00005015187	ncoa4 (ENSLCRG00005015185)	yipf3 (ENSLCRG00005015165) #22	ENSLCRG00005015162	ENSLCRG00005015161 #25	ENSLCRG00005015160	LRRC73 (ENSLCRG00005015158) #23	mea1 (ENSLCRG00005015156)	ppp2r5d (ENSLCRG00005014764)
Cod	MODERN SPECIES	6	zic2b (ENSGMOG00000000151)	ENSGMOG00000000145	tm9sf2 (ENSGMOG00000014604)	ENSGMOG00000012517	ENSGMOG00000012518	ENSGMOG00000008461	ENSGMOG00000002285	ENSGMOG00000029540	ENSGMOG00000026771	prkn (ENSGMOG00000003551)	ENSGMOG00000028673	ENSGMOG00000022579	ENSGMOG00000035953	ENSGMOG00000025515	ncoa4 (ENSGMOG00000034572)	yipf3 (ENSGMOG00000004630) #22	ENSGMOG00000018195 #23	ENSGMOG00000027899	ENSGMOG00000035678	mea1 (ENSGMOG00000018532)	ppp2r5d (ENSGMOG00000018505)	ENSGMOG00000023065 #29	ENSGMOG00000033739	ENSGMOG00000018369 #34	ENSGMOG00000008795	ENSGMOG00000000635	ENSGMOG00000024652	ENSGMOG00000036705	ENSGMOG00000018575	ENSGMOG00000024561	ENSGMOG00000005151
Protacanthopterygii	ANCESTRAL SPECIES	39	ENSGT00940000154815.b.b	ENSGT00390000010899.a.b.b.a	ENSGT00970000193390.c.b.b.a.m	ENSGT00390000003039	ENSGT00940000158434	ENSGT00390000001205.a	ENSGT00940000157303.e	ENSGT00950000183075.a.a.a.a	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b	ENSGT00940000155965.a.b	ENSGT01030000234576.D.a.a.b.b	ENSGT00390000001094.z	ENSGT00390000008403	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000172797	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT00940000158550	ENSGT00940000160793
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	61	ENSGT00940000159658.b.b.c	ENSGT00940000154815.b.b.e	ENSGT00970000193390.c.b.b.a.m	ENSGT00390000003039	ENSGT00940000158434.d.b.a.a	ENSGT00940000158434.c	ENSGT00390000001205.a.d	ENSGT00940000157303.e.h	ENSGT00950000183075.a.a.a.a.q	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b.c.b	ENSGT00940000155965.a.b	ENSGT00390000001094.z	ENSGT00390000008403.c	ENSGT00940000153766.A.i #22	ENSGT00390000003256.d #23	ENSGT00940000164045.f	ENSGT00940000160761.b #25	ENSGT00390000001216 #33	ENSGT00390000016927.d	ENSGT01030000234620.a.a.a.b.o	ENSGT00390000000614.c #29	ENSGT00940000168290.b	ENSGT00940000153954.wb #34	ENSGT00950000183147.B.e.b	ENSGT00940000160277.c	ENSGT00440000039984.a.e	ENSGT00940000158550	ENSGT00940000160793.a	ENSGT01100000263540.A.a.f
Salmoninae_a	ANCESTRAL SPECIES	11	ENSGT00970000193390.c.b.b.a.l.b.a	ENSGT00970000193390.c.b.b.b.a.v	ENSGT00390000003039.e	ENSGT00940000158434.d.b.a.a	ENSGT00390000003738.b.d.a.c.b	ENSGT00940000158434.c	ENSGT00390000001205.a.d	ENSGT00940000157303.e.h	ENSGT00950000183075.a.a.a.a.q	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b.c.b	ENSGT00940000155965.a.b	ENSGT00390000001094.z	ENSGT00390000008403.c	ENSGT00940000153766.A.i #22	ENSGT00390000003256.d #23	ENSGT00940000164045.f	ENSGT00940000160761.b #25	ENSGT00390000001216 #33	ENSGT00390000016927.d	ENSGT01030000234620.a.a.a.b.o	ENSGT00390000000614.c #29	ENSGT00940000168290.b	ENSGT00940000153954.wb #34	ENSGT00950000183147.B.e.b	ENSGT00940000160277.c	ENSGT00440000039984.a.e	ENSGT00940000158550	ENSGT00940000160793.a	ENSGT01100000263540.A.a.f
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00940000154815.b.b.e	ENSGT00390000003039.e	ENSGT00940000158434.d.b.a.a	ENSGT00390000003738.b.d.a.c.b	ENSGT00940000158434.c	ENSGT00390000001205.a.d	ENSGT00940000157303.e.h	ENSGT00950000183075.a.a.a.a.q	ENSGT00910000144630.a.c	ENSGT00390000011034.sc.b	ENSGT00390000011034.sc.a.a	ENSGT00940000155310.a.b.c.b	ENSGT00940000155965.a.b	ENSGT01060000250178	ENSGT00390000008403.c	ENSGT00940000153766.A.i #22	ENSGT00390000003256.d #23	ENSGT00940000164045.f	ENSGT00940000160761.b #25	ENSGT00390000001216 #33	ENSGT00390000016927.d	ENSGT01030000234620.a.a.a.b.o	ENSGT00390000000614.c #29	ENSGT00940000168290.b	ENSGT00940000153954.wb #34	ENSGT00950000183147.B.e.b	ENSGT00940000160277.c	ENSGT00440000039984.a.e	ENSGT00940000158550	ENSGT00940000160793.a	ENSGT01100000263540.A.a.f
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000158804.g	ENSGT00940000166093.e.a	ENSGT01000000220187	ENSGT00940000154649.A.q	ENSGT00390000003039.e	ENSGT00940000158434.c	ENSGT00390000001205.a.d	ENSGT00940000157303.e.h	ENSGT00950000183075.a.a.a.a.q	ENSGT00910000144630.a.c	ENSGT00390000011034.sc.a.a	ENSGT00940000155310.a.b.c.b	ENSGT00940000155965.a.b	ENSGT01060000250178	ENSGT00390000008403.c	ENSGT00940000153766.A.i #22	ENSGT00390000003256.d #23	ENSGT00940000164045.f	ENSGT00940000160761.b #25	ENSGT00390000001216 #33	ENSGT00390000016927.d	ENSGT01030000234620.a.a.a.b.o	ENSGT00390000000614.c #29	ENSGT00940000168290.b	ENSGT00940000153954.wb #34	ENSGT00950000183147.B.e.b	ENSGT00940000160277.c	ENSGT00440000039984.a.e	ENSGT00940000158550	ENSGT00940000160793.a	ENSGT01100000263540.A.a.f
Chinook salmon	MODERN SPECIES	30	KCNG3 (ENSOTSG00005020401)	COX7A2L (ENSOTSG00005020402)	ENSOTSG00005020403	ENSOTSG00005020404	ENSOTSG00005020407	EML4 (ENSOTSG00005020413)	pkdcca (ENSOTSG00005023311)	prph2b (ENSOTSG00005023332)	UBR2 (ENSOTSG00005023403)	ENSOTSG00005028091	prkn (ENSOTSG00005028093)	QKI (ENSOTSG00005028098)	ENSOTSG00005028105	ENSOTSG00005028107	ncoa4 (ENSOTSG00005028108)	yipf3 (ENSOTSG00005028110) #22	LRRC73 (ENSOTSG00005028111) #23	ENSOTSG00005028115	DLK2 (ENSOTSG00005028150) #25	dnph1 (ENSOTSG00005028160) #33	mea1 (ENSOTSG00005028161)	ppp2r5d (ENSOTSG00005028181)	ENSOTSG00005031664 #29	ENSOTSG00005031666	ENSOTSG00005031669 #34	SYNDIG1 (ENSOTSG00005031693)	CST7 (ENSOTSG00005031696)	apmap (ENSOTSG00005031698)	acss1 (ENSOTSG00005031722)	vsx1 (ENSOTSG00005031958)	entpd6 (ENSOTSG00005031959)
Coho salmon	MODERN SPECIES	24	ENSOKIG00005000078	ENSOKIG00005000087	ENSOKIG00005000101	EML4 (ENSOKIG00005000244)	ENSOKIG00005000342	pkdcca (ENSOKIG00005000349)	prph2b (ENSOKIG00005000362)	ENSOKIG00005000365	UBR2 (ENSOKIG00005000936)	ENSOKIG00005002657	prkn (ENSOKIG00005002719)	QKI (ENSOKIG00005002819)	ENSOKIG00005002833	ENSOKIG00005002837	ncoa4 (ENSOKIG00005002858)	yipf3 (ENSOKIG00005002897) #22	LRRC73 (ENSOKIG00005002943) #23	ENSOKIG00005002951	DLK2 (ENSOKIG00005002962) #25	dnph1 (ENSOKIG00005002975) #33	mea1 (ENSOKIG00005002986)	ppp2r5d (ENSOKIG00005003028)	ENSOKIG00005003258 #29	ENSOKIG00005003279	ENSOKIG00005003399 #34	SYNDIG1 (ENSOKIG00005003890)	CST7 (ENSOKIG00005003894)	apmap (ENSOKIG00005003908)	acss1 (ENSOKIG00005003938)	ENSOKIG00005003992	vsx1 (ENSOKIG00005003996)
Rainbow trout	MODERN SPECIES		ENSOMYG00000050070	wu:fj16a03 (ENSOMYG00000026703)	EML4 (ENSOMYG00000027209)	ENSOMYG00000028021	pkdcca (ENSOMYG00000028029)	ENSOMYG00000076493	prph2b (ENSOMYG00000028036)	ENSOMYG00000029138	ENSOMYG00000032251	ENSOMYG00000057207	ENSOMYG00000032282	ENSOMYG00000032319	ENSOMYG00000032332	ENSOMYG00000032351	ncoa4 (ENSOMYG00000032388)	yipf3 (ENSOMYG00000032419) #22	ENSOMYG00000032454 #23	ENSOMYG00000032553	DLK2 (ENSOMYG00000032836) #25	dnph1 (ENSOMYG00000032849) #33	mea1 (ENSOMYG00000032857)	ppp2r5d (ENSOMYG00000033264)	ENSOMYG00000075196 #29	ENSOMYG00000034284	ENSOMYG00000034589 #34	ENSOMYG00000069213	SYNDIG1 (ENSOMYG00000035879)	cytf (ENSOMYG00000035889)	APMAP (ENSOMYG00000035908)	ENSOMYG00000069041	ACSS1 (ENSOMYG00000000284)
Salmo	ANCESTRAL SPECIES	29	ENSGT00990000203619.A.b.b.b.a.e.i	ENSGT00940000154815.b.b.f.a.b	ENSGT00940000159658.b.b.c	ENSGT00390000003039.e	ENSGT00940000158434.d.b.a.a	ENSGT00390000003738.b.d.a.c.b	ENSGT00390000001205.a.d	ENSGT00940000157303.e.h	ENSGT00950000183075.a.a.a.a.q	ENSGT00910000144630.a	ENSGT00390000011034	ENSGT00940000155310.a.b.c.b	ENSGT00940000155965.a.b	ENSGT00390000001094.z	ENSGT00390000008403.c	ENSGT00940000153766.A.i #22	ENSGT00390000003256.d #23	ENSGT00940000164045.f	ENSGT00940000160761.b #25	ENSGT00390000001216 #33	ENSGT00390000016927.d	ENSGT01030000234620.a.a.a.b.o	ENSGT00390000000614.c #29	ENSGT00940000153954.wb #34	ENSGT00950000183147.B.e.b	ENSGT00940000160277.c	ENSGT00440000039984.a.e	ENSGT00940000158550	ENSGT00940000160793.a	ENSGT01100000263540.A.a.f	ENSGT00390000018613.a
Atlantic salmon	MODERN SPECIES	9	ENSSSAG00000112560	ENSSSAG00000092433	ENSSSAG00000040155	ENSSSAG00000001809	ENSSSAG00000042405	pkdcca (ENSSSAG00000042416)	ENSSSAG00000115091	prph2b (ENSSSAG00000042420)	ENSSSAG00000042694	ENSSSAG00000059761	prkn (ENSSSAG00000059829)	ENSSSAG00000104512	ENSSSAG00000103008	ENSSSAG00000060440	ncoa4 (ENSSSAG00000060369)	yipf3 (ENSSSAG00000060501) #22	lrrc73 (ENSSSAG00000060630) #23	ENSSSAG00000114068	ENSSSAG00000082235	dnph1 (ENSSSAG00000088880) #33	ENSSSAG00000060738 #25	mea1 (ENSSSAG00000105859)	ppp2r5d (ENSSSAG00000104067)	ENSSSAG00000064135	ENSSSAG00000064201 #34	ENSSSAG00000066860	ENSSSAG00000108668	SYNDIG1 (ENSSSAG00000100580)	cst7 (ENSSSAG00000066883)	apmap (ENSSSAG00000066899)	ACS2L (ENSSSAG00000066956)
River trout	MODERN SPECIES	35	KCNG3 (ENSSTUG00000000532)	ENSSTUG00000000529	ENSSTUG00000000521	ENSSTUG00000000518	ENSSTUG00000000515	ENSSTUG00000000360	pkdcca (ENSSTUG00000000338)	prph2b (ENSSTUG00000000327)	UBR2 (ENSSTUG00000000249)	ENSSTUG00000015199	prkn (ENSSTUG00000015138)	QKI (ENSSTUG00000015110)	ENSSTUG00000015102	ENSSTUG00000015061	ncoa4 (ENSSTUG00000015035)	yipf3 (ENSSTUG00000014906) #22	LRRC73 (ENSSTUG00000014884) #23	ENSSTUG00000014877	DLK2 (ENSSTUG00000014856) #25	dnph1 (ENSSTUG00000014832) #33	mea1 (ENSSTUG00000014812)	ppp2r5d (ENSSTUG00000011009)	ENSSTUG00000010904 #29	ENSSTUG00000010014 #34	SYNDIG1 (ENSSTUG00000009973)	CST7 (ENSSTUG00000009955)	apmap (ENSSTUG00000009921)	acss1 (ENSSTUG00000009719)	vsx1 (ENSSTUG00000009691)	entpd6 (ENSSTUG00000009629)	ENSSTUG00000009617
Huchen	MODERN SPECIES	84					EML4 (ENSHHUG00000035368)	pkdcca (ENSHHUG00000035361)	prph2b (ENSHHUG00000035358)	UBR2 (ENSHHUG00000035325)	ENSHHUG00000035310	ENSHHUG00000035307	prkn (ENSHHUG00000035262)	QKI (ENSHHUG00000035243)	ENSHHUG00000035238	ENSHHUG00000035223	ncoa4 (ENSHHUG00000035199)	yipf3 (ENSHHUG00000035164) #22	LRRC73 (ENSHHUG00000035148) #23	ENSHHUG00000035141	DLK2 (ENSHHUG00000035130) #25	dnph1 (ENSHHUG00000035121) #33	mea1 (ENSHHUG00000035117)	ppp2r5d (ENSHHUG00000034977)	ENSHHUG00000034949 #29	ENSHHUG00000034792 #34	SYNDIG1 (ENSHHUG00000034791)	CST7 (ENSHHUG00000034784)	acss1 (ENSHHUG00000034737)	vsx1 (ENSHHUG00000034724)	entpd6 (ENSHHUG00000034722)	ENSHHUG00000034720	pygb (ENSHHUG00000033286)
Salmoninae	ANCESTRAL SPECIES	82												ENSGT00940000155310.a.b.c.a	ENSGT01030000234576.D.a.a.b.b	ENSGT01060000249975	ENSGT00390000008403.d	ENSGT00940000153766.A.j #22	ENSGT00390000003256.c #23	ENSGT00940000164045.e	ENSGT00940000160761.a #25	ENSGT00390000016927.c	ENSGT01030000234620.a.a.a.b.p	ENSGT00390000000614.d #29	ENSGT00940000168290.a	ENSGT00940000172797	ENSGT00940000153954.vb #34	ENSGT00950000183147.B.e.a	ENSGT00940000160277.d	ENSGT00440000039984.a.f	ENSGT01100000263520.a.a.a.a.b.b.b	ENSGT00940000160793.b	ENSGT01100000263540.A.a.e
Huchen	MODERN SPECIES	122											QKI (ENSHHUG00000036308)	ENSHHUG00000036304	ENSHHUG00000036238	ncoa4 (ENSHHUG00000036221)	ENSHHUG00000036220	yipf3 (ENSHHUG00000036178) #22	LRRC73 (ENSHHUG00000036163) #23	ENSHHUG00000036153	DLK2 (ENSHHUG00000036147) #25	mea1 (ENSHHUG00000036141)	ppp2r5d (ENSHHUG00000034937)	ENSHHUG00000034918 #29	ENSHHUG00000034908	ENSHHUG00000034903	ENSHHUG00000034867 #34	SYNDIG1 (ENSHHUG00000034857)	CST7 (ENSHHUG00000034852)	apmap (ENSHHUG00000034770)	ENSHHUG00000034749	vsx1 (ENSHHUG00000034739)	entpd6 (ENSHHUG00000034730)
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00940000161584.n	ENSGT00390000013008.g	ENSGT00990000203619.A.b.b.b.a.e.j	ENSGT00940000159658.b.b.d	ENSGT00940000154815.b.b.f.a.a	ENSGT00940000158434.d.a	ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e	ENSGT00390000001205.a.c	ENSGT00940000157303.e.g	ENSGT00950000183075.a.a.a.a.r	ENSGT00990000210314	ENSGT00940000155310.a.b.c.a	ENSGT01030000234576.D.a.a.b.b	ENSGT01060000249975	ENSGT00390000008403.d	ENSGT00940000153766.A.j #22	ENSGT00390000003256.c #23	ENSGT00940000164045.e	ENSGT00940000160761.a #25	ENSGT00390000016927.c	ENSGT01030000234620.a.a.a.b.p	ENSGT00390000000614.d #29	ENSGT00940000168290.a	ENSGT00940000153954.vb #34	ENSGT00950000183147.B.e.a	ENSGT00940000160277.d	ENSGT00440000039984.a.f	ENSGT01100000263520.a.a.a.a.b.b.b	ENSGT00940000160793.b	ENSGT01100000263540.A.a.e	ENSGT00660000095541.a.a.l
Salmo	ANCESTRAL SPECIES	23	ENSGT00940000159658.b.b.d	ENSGT00940000154815.b.b.f.a.a	ENSGT00940000164656.b.b.a.a.a.a.`b.a	ENSGT00970000193390.c.b.b.a.m	ENSGT00390000003039.f	ENSGT00940000158434.d.a	ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e	ENSGT00390000001205.a.c	ENSGT00940000157303.e.g	ENSGT00950000183075.a.a.a.a.r	ENSGT00990000210314	ENSGT01060000251565	ENSGT00940000155310.a.b.c.a	ENSGT01030000234576.D.a.a.b.b.g	ENSGT00390000008403.d	ENSGT00940000153766.A.j #22	ENSGT00390000003256.c #23	ENSGT00940000164045.e	ENSGT00940000160761.a #25	ENSGT00390000016927.c	ENSGT01030000234620.a.a.a.b.p	ENSGT00390000000614.d #29	ENSGT00940000168290.a	ENSGT00940000153954.vb #34	ENSGT00950000183147.B.e.a	ENSGT00940000160277.d	ENSGT00440000039984.a.f	ENSGT01100000263520.a.a.a.a.b.b.b	ENSGT00940000160793.b	ENSGT01100000263540.A.a.e	ENSGT00660000095541.a.a.l
River trout	MODERN SPECIES	9	ENSSTUG00000012547	ENSSTUG00000012553	ENSSTUG00000012561	ENSSTUG00000012570	EML4 (ENSSTUG00000012648)	ENSSTUG00000013848	pkdcca (ENSSTUG00000013852)	prph2b (ENSSTUG00000013857)	UBR2 (ENSSTUG00000013917)	ENSSTUG00000015192	ENSSTUG00000015210	ENSSTUG00000015213	QKI (ENSSTUG00000015221)	ENSSTUG00000015253	ncoa4 (ENSSTUG00000015261)	yipf3 (ENSSTUG00000015288) #22	LRRC73 (ENSSTUG00000015414) #23	ENSSTUG00000024881	DLK2 (ENSSTUG00000024891) #25	mea1 (ENSSTUG00000024902)	ppp2r5d (ENSSTUG00000024928)	ENSSTUG00000025492 #29	ENSSTUG00000025511	ENSSTUG00000025613 #34	SYNDIG1 (ENSSTUG00000028413)	CST7 (ENSSTUG00000028429)	apmap (ENSSTUG00000028444)	ENSSTUG00000028481	vsx1 (ENSSTUG00000028490)	entpd6 (ENSSTUG00000028521)	ENSSTUG00000028578
Atlantic salmon	MODERN SPECIES		ENSSSAG00000001444	ENSSSAG00000001448	EML4 (ENSSSAG00000040250)	ENSSSAG00000027035	ENSSSAG00000028365	pkdcc (ENSSSAG00000028618)	ENSSSAG00000109094	prph2b (ENSSSAG00000104476)	ENSSSAG00000032452	ENSSSAG00000055884	ENSSSAG00000055889	ENSSSAG00000059951	ENSSSAG00000094772	ENSSSAG00000107433	ncoa4 (ENSSSAG00000055914)	yipf3 (ENSSSAG00000055922) #22	ENSSSAG00000121854 #23	ENSSSAG00000091674	DLK2 (ENSSSAG00000106977) #25	mea1 (ENSSSAG00000055949)	ppp2r5d (ENSSSAG00000086741)	ENSSSAG00000100637	ENSSSAG00000112746 #29	ENSSSAG00000109034	ENSSSAG00000059158	ENSSSAG00000059225 #34	ENSSSAG00000062430	apmap (ENSSSAG00000062463)	ENSSSAG00000062552	VSX1 (ENSSSAG00000062565)	enp6 (ENSSSAG00000062635)
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00970000193390.c.b.b.a.m	ENSGT00390000003039.f	ENSGT00940000158434.d.b.b	ENSGT00940000158434.d.a	ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e	ENSGT00390000001205.a.c	ENSGT00940000157303.e.g	ENSGT00950000183075.a.a.a.a.r	ENSGT00390000011034.sc.a.b	ENSGT00940000155310.a.b.d	ENSGT00990000210314	ENSGT00940000155310.a.b.c.a	ENSGT01030000234576.D.a.a.b.b	ENSGT01060000249975	ENSGT00390000008403.d	ENSGT00940000153766.A.j #22	ENSGT00390000003256.c #23	ENSGT00940000164045.e	ENSGT00940000160761.a #25	ENSGT00390000016927.c	ENSGT01030000234620.a.a.a.b.p	ENSGT00970000196788.I	ENSGT00390000000614.d #29	ENSGT00940000168290.a	ENSGT00940000153954.vb #34	ENSGT00950000183147.B.e.a	ENSGT00940000160277.d	ENSGT00440000039984.a.f	ENSGT01100000263520.a.a.a.a.b.b.b	ENSGT00940000160793.b	ENSGT01100000263540.A.a.e
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00990000203619.A.b.b.b.a.e.j	ENSGT00940000159658.b.b.d	ENSGT00940000154815.b.b.f.b	ENSGT00390000003039.f	ENSGT00940000158434.d.b.b	ENSGT01100000263515.a.b.a.b.b.k.b.a.a.e	ENSGT00390000001205.a.c	ENSGT00940000157303.e.g	ENSGT00950000183075.a.a.a.a.r	ENSGT00390000011034.sc.a.b	ENSGT00990000210314	ENSGT00940000155310.a.b.c.a	ENSGT01030000234576.D.a.a.b.b	ENSGT01060000249975	ENSGT00390000008403.d	ENSGT00940000153766.A.j #22	ENSGT00390000003256.c #23	ENSGT00940000164045.e	ENSGT00940000160761.a #25	ENSGT00390000016927.c	ENSGT01030000234620.a.a.a.b.p	ENSGT00970000196788.I	ENSGT00390000000614.d #29	ENSGT00940000168290.a	ENSGT00940000153954.vb #34	ENSGT00950000183147.B.e.a	ENSGT00940000160277.d	ENSGT00440000039984.a.f	ENSGT01100000263520.a.a.a.a.b.b.b	ENSGT00940000160793.b	ENSGT01100000263540.A.a.e
Coho salmon	MODERN SPECIES	2	KCNG3 (ENSOKIG00005004108)	COX7A2L (ENSOKIG00005004104)	ENSOKIG00005004093	ENSOKIG00005004086	EML4 (ENSOKIG00005003765)	ENSOKIG00005003700	pkdcca (ENSOKIG00005003689)	prph2b (ENSOKIG00005003683)	UBR2 (ENSOKIG00005003086)	ENSOKIG00005002803	ENSOKIG00005002790	QKI (ENSOKIG00005002772)	ENSOKIG00005002759	ENSOKIG00005002735	ncoa4 (ENSOKIG00005002717)	yipf3 (ENSOKIG00005002612) #22	LRRC73 (ENSOKIG00005002574) #23	ENSOKIG00005002559	DLK2 (ENSOKIG00005002543) #25	mea1 (ENSOKIG00005002530)	ppp2r5d (ENSOKIG00005002191)	ENSOKIG00005002026	ENSOKIG00005002009 #29	ENSOKIG00005001964	ENSOKIG00005049278 #34	SYNDIG1 (ENSOKIG00005049150)	CST7 (ENSOKIG00005049146)	APMAP (ENSOKIG00005049139)	ENSOKIG00005049138	vsx1 (ENSOKIG00005049133)	entpd6 (ENSOKIG00005049122)
Chinook salmon	MODERN SPECIES		mcfd2 (ENSOTSG00005027862)	haao (ENSOTSG00005027868)	OXER1 (ENSOTSG00005027870)	KCNG3 (ENSOTSG00005027871)	COX7A2L (ENSOTSG00005027872)	ENSOTSG00005027874	EML4 (ENSOTSG00005027887)	ENSOTSG00005028668	pkdcca (ENSOTSG00005028669)	prph2b (ENSOTSG00005028670)	UBR2 (ENSOTSG00005028752)	prkn (ENSOTSG00005037121)	ENSOTSG00005037122	ENSOTSG00005037123	ncoa4 (ENSOTSG00005037124)	yipf3 (ENSOTSG00005000175) #22	LRRC73 (ENSOTSG00005000184) #23	ENSOTSG00005000186	ENSOTSG00005000189	DLK2 (ENSOTSG00005000190) #25	mea1 (ENSOTSG00005000191)	ppp2r5d (ENSOTSG00005000200)	ENSOTSG00005000381	ENSOTSG00005000383 #29	ENSOTSG00005000388	ENSOTSG00005000433 #34	SYNDIG1 (ENSOTSG00005001516)	CST7 (ENSOTSG00005001518)	apmap (ENSOTSG00005001520)	ENSOTSG00005001525	vsx1 (ENSOTSG00005001527)
Rainbow trout	MODERN SPECIES	15	KCNG3 (ENSOMYG00000012443)	ENSOMYG00000012449	ENSOMYG00000012471	ENSOMYG00000012476	EML4 (ENSOMYG00000013339)	ENSOMYG00000064175	ENSOMYG00000064619	pkdcca (ENSOMYG00000025394)	prph2b (ENSOMYG00000025420)	ENSOMYG00000026458	ENSOMYG00000031909	ENSOMYG00000073233	ENSOMYG00000031975	ENSOMYG00000032001	ncoa4 (ENSOMYG00000032024)	yipf3 (ENSOMYG00000032086) #22	ENSOMYG00000032182 #23	ENSOMYG00000032186	DLK2 (ENSOMYG00000032195) #25	ENSOMYG00000048363	mea1 (ENSOMYG00000032200)	ppp2r5d (ENSOMYG00000032657)	ENSOMYG00000035933	ENSOMYG00000056739 #29	ENSOMYG00000039523	ENSOMYG00000063719	ENSOMYG00000036358 #34	SYNDIG1 (ENSOMYG00000039560)	CST7 (ENSOMYG00000039577)	APMAP (ENSOMYG00000039623)	ENSOMYG00000039660
Northern pike	MODERN SPECIES	5	ENSELUG00000024859	EML4 (ENSELUG00000016121)	ENSELUG00000016176	ENSELUG00000000614	ENSELUG00000033040	pkdcca (ENSELUG00000016230)	ENSELUG00000029784	prph2b (ENSELUG00000016256)	UBR2 (ENSELUG00000016522)	ENSELUG00000016617	prkn (ENSELUG00000016662)	QKI (ENSELUG00000016698)	ENSELUG00000016707	ENSELUG00000016738	ncoa4 (ENSELUG00000016764)	yipf3 (ENSELUG00000016794) #22	LRRC73 (ENSELUG00000016819) #23	ENSELUG00000016871	DLK2 (ENSELUG00000016914) #25	dnph1 (ENSELUG00000016938) #33	mea1 (ENSELUG00000016957)	ppp2r5d (ENSELUG00000017007)	ENSELUG00000017055 #29	ENSELUG00000017093	CUL7 (ENSELUG00000017179) #34	SYNDIG1 (ENSELUG00000017206)	cst7 (ENSELUG00000017246)	apmap (ENSELUG00000017302)	ENSELUG00000017463	acss1 (ENSELUG00000017505)	ENSELUG00000032087
Osteoglossiformes	ANCESTRAL SPECIES	46	ENSGT00940000164992.g	ENSGT00940000155061.a.b.l	ENSGT00390000004582	ENSGT00660000095541.a.a	ENSGT00390000013968	ENSGT00940000166409	ENSGT00950000183148.b.b	ENSGT00390000018613.a	ENSGT01100000263540.A.a	ENSGT00940000160793	ENSGT00940000158550	ENSGT00570000079239	ENSGT00390000013448.a.a	ENSGT00390000002970	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000164045	ENSGT00940000160761 #25	ENSGT00390000001216 #33	ENSGT00390000016927	ENSGT01030000234620.a.a.a.b	ENSGT00390000000614 #29	ENSGT00940000168290	ENSGT00940000153954 #34	ENSGT00950000183147.B	ENSGT00940000160277	ENSGT00440000039984.a	ENSGT01100000263520.a.a.a.a.b.b.b.b	ENSGT00940000157865	ENSGT00440000037341.a
P. kingsleyae	MODERN SPECIES	188			ninl (ENSPKIG00000010435)	gins1 (ENSPKIG00000010392)	abhd12 (ENSPKIG00000010364)	pygb (ENSPKIG00000010308)	ENSPKIG00000010258	entpd6 (ENSPKIG00000010184)	vsx1 (ENSPKIG00000010156)	ENSPKIG00000010145	acss1 (ENSPKIG00000010107)	nvl (ENSPKIG00000009967)	degs1 (ENSPKIG00000009914)	fbxo28 (ENSPKIG00000009895)	polr1c (ENSPKIG00000009858) #21	yipf3 (ENSPKIG00000009819) #22	LRRC73 (ENSPKIG00000009786) #23	ENSPKIG00000009733	DLK2 (ENSPKIG00000009706) #25	dnph1 (ENSPKIG00000009695) #33	mea1 (ENSPKIG00000009678)	ppp2r5d (ENSPKIG00000009600)	ENSPKIG00000009562 #29	ENSPKIG00000009537	CUL7 (ENSPKIG00000009345) #34	SYNDIG1 (ENSPKIG00000009263)	ENSPKIG00000009194	apmap (ENSPKIG00000009133)	ENSPKIG00000009111	ENSPKIG00000009072	FAM98A (ENSPKIG00000009038)
Asian bonytongue	MODERN SPECIES	23	nfkb2 (ENSSFOG00015020393)	PSD (ENSSFOG00015020339)	ENSSFOG00015020243	AIFM2 (ENSSFOG00015020205)	ninl (ENSSFOG00015020152)	gins1 (ENSSFOG00015025088)	abhd12 (ENSSFOG00015027870)	pygb (ENSSFOG00015020040)	ENSSFOG00015019993	entpd6 (ENSSFOG00015019960)	vsx1 (ENSSFOG00015019941)	acss1 (ENSSFOG00015019908)	degs1 (ENSSFOG00015026332)	fbxo28 (ENSSFOG00015032127)	polr1c (ENSSFOG00015019860) #21	yipf3 (ENSSFOG00015019808) #22	LRRC73 (ENSSFOG00015019790) #23	ENSSFOG00015019742	DLK2 (ENSSFOG00015033158) #25	dnph1 (ENSSFOG00015019717) #33	mea1 (ENSSFOG00015027564)	ppp2r5d (ENSSFOG00015019640)	ENSSFOG00015019616 #29	ENSSFOG00015019586	CUL7 (ENSSFOG00015019507) #34	ENSSFOG00015024873	SYNDIG1 (ENSSFOG00015031745)	ENSSFOG00015019486	apmap (ENSSFOG00015019473)	ENSSFOG00015019461	ENSSFOG00015019432
Elephant shark	MODERN SPECIES	1546	crls1 (ENSCMIG00000018210)	MCM8 (ENSCMIG00000018196)	trmt6 (ENSCMIG00000018187)	gpcpd1 (ENSCMIG00000018181)	ENSCMIG00000018177	ENSCMIG00000018176	galnt14 (ENSCMIG00000018173)	ENSCMIG00000018171	ENSCMIG00000018167	susd4 (ENSCMIG00000018160)	disp1 (ENSCMIG00000018158)	brox (ENSCMIG00000018134)	aida (ENSCMIG00000018118)	ENSCMIG00000018109	polr1c (ENSCMIG00000018107) #21	yipf3 (ENSCMIG00000018080) #22	glo1 (ENSCMIG00000018070)	ENSCMIG00000018067	ENSCMIG00000018066	ENSCMIG00000018064	ENSCMIG00000018063	soul4 (ENSCMIG00000018061)	ptk7a (ENSCMIG00000018031) #36	srfa (ENSCMIG00000018006) #35	CUL7 (ENSCMIG00000017846) #34	dnph1 (ENSCMIG00000017727) #33	mad2l1bp (ENSCMIG00000017722) #17	DNAH8 (ENSCMIG00000017635)	LRRC73 (ENSCMIG00000017581) #23	ENSCMIG00000017546	DLK2 (ENSCMIG00000017517) #25
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000153766.A #22
Lamprey	MODERN SPECIES	29															TRPM2 (ENSPMAG00000001353)	yipf3 (ENSPMAG00000001348) #22	thoc7 (ENSPMAG00000001319)	ENSPMAG00000001318	ENSPMAG00000001313	ENSPMAG00000001306	ENSPMAG00000001288
Hagfish	MODERN SPECIES	969													ENSEBUG00000007183	ENSEBUG00000001114	tpp1 (ENSEBUG00000007691)	yipf3 (ENSEBUG00000007124) #22	ENSEBUG00000001344	ENSEBUG00000012653	ENSEBUG00000016875	ENSEBUG00000003148	lrrc58a (ENSEBUG00000008957)	ENSEBUG00000009698	ENSEBUG00000004657	ENSEBUG00000006057	ENSEBUG00000014555	ENSEBUG00000008706	clvs2 (ENSEBUG00000007331)	snrnp40 (ENSEBUG00000004109)	ENSEBUG00000013305	ENSEBUG00000002441	ube2f (ENSEBUG00000000609)
Ciona	ANCESTRAL SPECIES																	ENSGT00940000153766.A #22
Ciona savignyi	MODERN SPECIES	82	ENSCSAVG00000011430	ENSCSAVG00000011429	ENSCSAVG00000011428	ENSCSAVG00000011427	ENSCSAVG00000011426	ENSCSAVG00000011425	ENSCSAVG00000011424	ENSCSAVG00000011423	ENSCSAVG00000011422	ENSCSAVG00000011421	ENSCSAVG00000011420	ENSCSAVG00000011419	ENSCSAVG00000011418	ENSCSAVG00000011417	ENSCSAVG00000011416	ENSCSAVG00000011415 #22	ENSCSAVG00000011414	ENSCSAVG00000011413	ENSCSAVG00000011412	ENSCSAVG00000011363	ENSCSAVG00000011335	ENSCSAVG00000011333	ENSCSAVG00000011329	ENSCSAVG00000011325	ENSCSAVG00000011324	ENSCSAVG00000011323	ENSCSAVG00000011322	ENSCSAVG00000011321	ENSCSAVG00000011320	ENSCSAVG00000011319	ENSCSAVG00000011316
Ciona intestinalis	MODERN SPECIES	2	ENSCING00000021472	ENSCING00000018337	ENSCING00000018152	ENSCING00000020662	ENSCING00000016946	ENSCING00000023105	ENSCING00000019851	ENSCING00000022358	ENSCING00000019937	ENSCING00000016949	ENSCING00000025087	ENSCING00000023631	ENSCING00000023211	ENSCING00000022939	ENSCING00000023544	ENSCING00000024819 #22	ENSCING00000020738	ENSCING00000019669	ENSCING00000001244	ENSCING00000022947	ENSCING00000022168	ci-zf(c2h2)-148 (ENSCING00000019289)	ENSCING00000020879	ENSCING00000023639	ENSCING00000023774	ENSCING00000001215	ENSCING00000001459	ENSCING00000001458	ENSCING00000021134	ENSCING00000022125	ENSCING00000021752
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00940000153766.A #22
Caenorhabditis elegans	MODERN SPECIES	1	T10B9.9 (WBGene00011678)	ZK1321.4 (WBGene00014262)	aqp-10 (WBGene00000178)	shk-1 (WBGene00014261)	ZK1321.1 (WBGene00014260)	Y53C12B.7 (WBGene00013146)	nos-3 (WBGene00003785)	Y53C12B.1 (WBGene00013143)	pno-1 (WBGene00013144)	mab-3 (WBGene00003100)	cutl-2 (WBGene00013145)	Y53C12A.11 (WBGene00194906)	Y53C12A.6 (WBGene00013141)	wee-1.3 (WBGene00006940)	glt-5 (WBGene00001623)	Y53C12A.3 (WBGene00013139) #22	Y53C12A.10 (WBGene00175030) ##22	mop-25.2 (WBGene00013140)	Y53C12A.7 (WBGene00013142)	Y53C12A.8 (WBGene00044158)	nlp-11 (WBGene00003749)	ZK1320.9 (WBGene00014258)	ZK1320.13 (WBGene00044007)	arc-1 (WBGene00000180)	ZK1320.7 (WBGene00014256)	taf-8 (WBGene00006390)	ZK1320.11 (WBGene00014259)	ZK1320.5 (WBGene00014255)	cyp-13A10 (WBGene00014254)	ZK1320.3 (WBGene00014253)	ZK1320.2 (WBGene00014252)
Bilateria	ANCESTRAL SPECIES																	ENSGT00940000153766.B ##22
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00940000153766.B ##22
Fruitfly	MODERN SPECIES	19	eEF1gamma (FBgn0029176)	Cisd2 (FBgn0062442)	Brd8 (FBgn0039654)	CG14507 (FBgn0039655)	Usp1 (FBgn0028476)	CG11951 (FBgn0039656)	CG31445 (FBgn0051445)	SP1029 (FBgn0263236)	stg (FBgn0003525)	CG45544 (FBgn0267104)	CG14506 (FBgn0039659)	Cnx99A (FBgn0015622)	CG45546 (FBgn0267106)	Ptp99A (FBgn0004369)	CG2321 (FBgn0039663)	CG2006 (FBgn0039664) ##22	Spase12 (FBgn0040623)	CG2310 (FBgn0039665)	Diedel (FBgn0039666)	FipoQ (FBgn0039667)	Trc8 (FBgn0039668)	ND-20L (FBgn0039669)	Dr (FBgn0000492)	CG7567 (FBgn0039670)	CG11470 (FBgn0039671)	CG31041 (FBgn0051041)	alph (FBgn0086361)	CG7568 (FBgn0039673)	Diedel2 (FBgn0262873)	CG1907 (FBgn0039674)	Dop1R2 (FBgn0266137)
Caenorhabditis elegans	MODERN SPECIES	1	ZK1321.4 (WBGene00014262)	aqp-10 (WBGene00000178)	shk-1 (WBGene00014261)	ZK1321.1 (WBGene00014260)	Y53C12B.7 (WBGene00013146)	nos-3 (WBGene00003785)	Y53C12B.1 (WBGene00013143)	pno-1 (WBGene00013144)	mab-3 (WBGene00003100)	cutl-2 (WBGene00013145)	Y53C12A.11 (WBGene00194906)	Y53C12A.6 (WBGene00013141)	wee-1.3 (WBGene00006940)	glt-5 (WBGene00001623)	Y53C12A.3 (WBGene00013139) #22	Y53C12A.10 (WBGene00175030) ##22	mop-25.2 (WBGene00013140)	Y53C12A.7 (WBGene00013142)	Y53C12A.8 (WBGene00044158)	nlp-11 (WBGene00003749)	ZK1320.9 (WBGene00014258)	ZK1320.13 (WBGene00044007)	arc-1 (WBGene00000180)	ZK1320.7 (WBGene00014256)	taf-8 (WBGene00006390)	ZK1320.11 (WBGene00014259)	ZK1320.5 (WBGene00014255)	cyp-13A10 (WBGene00014254)	ZK1320.3 (WBGene00014253)	ZK1320.2 (WBGene00014252)	gstk-1 (WBGene00014251)
Chordata	ANCESTRAL SPECIES																	ENSGT00940000153766.B ##22
Ciona	ANCESTRAL SPECIES	235												ENSGT00950000183182.b.i.a	ENSGT00940000170886	ENSGT00940000158489	ENSGT00940000156786	ENSGT00940000153766.B ##22
Ciona savignyi	MODERN SPECIES	33										ENSCSAVG00000001122	ENSCSAVG00000001123	ENSCSAVG00000001124	ENSCSAVG00000001130	ENSCSAVG00000001132	ENSCSAVG00000001134	ENSCSAVG00000001156 ##22	ENSCSAVG00000001160	ENSCSAVG00000001166	ENSCSAVG00000001169	ENSCSAVG00000001204	ENSCSAVG00000001512	ENSCSAVG00000001513	ENSCSAVG00000001514	ENSCSAVG00000001533	ENSCSAVG00000001538	ENSCSAVG00000001540	ENSCSAVG00000001544	ENSCSAVG00000001548	ENSCSAVG00000001557	ENSCSAVG00000001816	ENSCSAVG00000001817
Ciona intestinalis	MODERN SPECIES	175	ENSCING00000015048	fz3/6 (ENSCING00000005201)	ENSCING00000005198	ENSCING00000005196	ENSCING00000015051	ENSCING00000005187	ENSCING00000002739	ENSCING00000015238	ENSCING00000002791	ENSCING00000002789	ENSCING00000002788	ENSCING00000025102	ENSCING00000019209	ENSCING00000002758	e(y)2 (ENSCING00000002757)	ENSCING00000002754 ##22	ENSCING00000002794	ENSCING00000020654	ENSCING00000002802	ENSCING00000015265	ENSCING00000002801	ENSCING00000022864	ENSCING00000015254	ENSCING00000021758	ENSCING00000015252	ENSCING00000010527	ENSCING00000024057	ENSCING00000000461	ENSCING00000024847	ENSCING00000015753
Vertebrata	ANCESTRAL SPECIES	362															ENSGT00950000183187.A	ENSGT00940000153766.B ##22
Gnathostomata	ANCESTRAL SPECIES	326									ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00990000205468	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101
Euteleostomi	ANCESTRAL SPECIES	6	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000169841	ENSGT00990000205468	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000166711	ENSGT00520000055647.b	ENSGT00940000160462	ENSGT00940000158710	ENSGT00390000010440	ENSGT00940000177451
Sarcopterygii	ANCESTRAL SPECIES	9	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000169841	ENSGT00990000205468	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00390000010440	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938
Tetrapoda	ANCESTRAL SPECIES	11	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137
Amniota	ANCESTRAL SPECIES	15	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613
Mammalia	ANCESTRAL SPECIES	68	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101
Theria	ANCESTRAL SPECIES	22		ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00940000175727	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000159303	ENSGT00940000162512.d	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000159303	ENSGT00940000162512.d	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Diprotodontia	ANCESTRAL SPECIES		ENSGT00940000159303	ENSGT00940000162512.d	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Diprotodontia_a	ANCESTRAL SPECIES	1	ENSGT00940000159303	ENSGT00940000162512.d	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.bb.a	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
koala	MODERN SPECIES		ENSPCIG00000036053	SLC24A5 (ENSPCIG00000022914)	MYEF2 (ENSPCIG00000022902)	CTXN2 (ENSPCIG00000022900)	SLC12A1 (ENSPCIG00000022889)	ENSPCIG00000022883	FBN1 (ENSPCIG00000022869)	CEP152 (ENSPCIG00000018054)	SHC4 (ENSPCIG00000018049)	SECISBP2L (ENSPCIG00000018047)	COPS2 (ENSPCIG00000018046)	GALK2 (ENSPCIG00000018043)	ENSPCIG00000018038	FGF7 (ENSPCIG00000018042)	ENSPCIG00000018040	DTWD1 (ENSPCIG00000004173) ##22	ATP8B4 (ENSPCIG00000018026)	SLC27A2 (ENSPCIG00000003697)	HDC (ENSPCIG00000003694)	GABPB1 (ENSPCIG00000025794)	USP8 (ENSPCIG00000025795)	USP50 (ENSPCIG00000025798)	TRPM7 (ENSPCIG00000025799)	SPPL2A (ENSPCIG00000025801)	AP4E1 (ENSPCIG00000017889)	TNFAIP8L3 (ENSPCIG00000005300)	CYP19A1 (ENSPCIG00000005286)	GLDN (ENSPCIG00000005270)	DMXL2 (ENSPCIG00000005228)	SCG3 (ENSPCIG00000005212)	LYSMD2 (ENSPCIG00000005203)
Common wonbat	MODERN SPECIES	1076										ENSVURG00010004102	SECISBP2L (ENSVURG00010004119)	COPS2 (ENSVURG00010004145)	GALK2 (ENSVURG00010004198)	FGF7 (ENSVURG00010004216)	ENSVURG00010004224	DTWD1 (ENSVURG00010004239) ##22	ATP8B4 (ENSVURG00010004258)	SLC27A2 (ENSVURG00010004309)	ENSVURG00010004345	GABPB1 (ENSVURG00010004393)	ENSVURG00010004405	USP8 (ENSVURG00010004408)	USP50 (ENSVURG00010004429)	TRPM7 (ENSVURG00010004494)	SPPL2A (ENSVURG00010004585)	AP4E1 (ENSVURG00010004641)	TNFAIP8L3 (ENSVURG00010004650)	CYP19A1 (ENSVURG00010004661)	DMXL2 (ENSVURG00010004688)	SCG3 (ENSVURG00010004741)	LYSMD2 (ENSVURG00010004752)
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000022819	ENSSHAG00000021375	ENSSHAG00000011638	MYEF2 (ENSSHAG00000011695)	CTXN2 (ENSSHAG00000025735)	SLC12A1 (ENSSHAG00000012219)	DUT (ENSSHAG00000013061)	FBN1 (ENSSHAG00000013755)	CEP152 (ENSSHAG00000015100)	SHC4 (ENSSHAG00000015404)	SECISBP2L (ENSSHAG00000026437)	COPS2 (ENSSHAG00000027188)	GALK2 (ENSSHAG00000016566)	FGF7 (ENSSHAG00000027949)	ENSSHAG00000001548	DTWD1 (ENSSHAG00000004048) ##22	ATP8B4 (ENSSHAG00000007396)	SLC27A2 (ENSSHAG00000010789)	HDC (ENSSHAG00000011147)	GABPB1 (ENSSHAG00000031701)	USP8 (ENSSHAG00000012085)	USP50 (ENSSHAG00000012441)	TRPM7 (ENSSHAG00000012617)	SPPL2A (ENSSHAG00000013412)	AP4E1 (ENSSHAG00000014210)	TNFAIP8L3 (ENSSHAG00000022065)	CYP19A1 (ENSSHAG00000015151)	GLDN (ENSSHAG00000015668)	DMXL2 (ENSSHAG00000015967)	SCG3 (ENSSHAG00000026438)	LYSMD2 (ENSSHAG00000016545)
Opossum	MODERN SPECIES		MYEF2 (ENSMODG00000002744)	CTXN2 (ENSMODG00000024402)	SLC12A1 (ENSMODG00000002719)	ENSMODG00000002687	ENSMODG00000051546	FBN1 (ENSMODG00000002675)	ENSMODG00000043195	CEP152 (ENSMODG00000002582)	SHC4 (ENSMODG00000002552)	SECISBP2L (ENSMODG00000002516)	ENSMODG00000002466	GALK2 (ENSMODG00000002423)	ENSMODG00000037020	ENSMODG00000002386	FGF7 (ENSMODG00000046995)	DTWD1 (ENSMODG00000002394) ##22	ATP8B4 (ENSMODG00000002365)	ENSMODG00000038961	ENSMODG00000041220	SLC27A2 (ENSMODG00000002320)	HDC (ENSMODG00000002284)	GABPB1 (ENSMODG00000002253)	USP8 (ENSMODG00000002220)	USP50 (ENSMODG00000002207)	TRPM7 (ENSMODG00000002196)	SPPL2A (ENSMODG00000002148)	AP4E1 (ENSMODG00000002130)	TNFAIP8L3 (ENSMODG00000002109)	CYP19A1 (ENSMODG00000002101)	GLDN (ENSMODG00000002073)	DMXL2 (ENSMODG00000002058)
Eutheria	ANCESTRAL SPECIES	8	ENSGT00390000019406	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00940000175727	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Boreoeutheria	ANCESTRAL SPECIES	3	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00940000175727	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Euarchontoglires	ANCESTRAL SPECIES	3	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00940000175727	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Euarchontoglires_A	ANCESTRAL SPECIES	3	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Tree shrew	MODERN SPECIES	1959														GALK2 (ENSTBEG00000006362)	ENSTBEG00000006925	DTWD1 (ENSTBEG00000008025) ##22
Glires	ANCESTRAL SPECIES	15	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Lagomorpha	ANCESTRAL SPECIES	7	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Rabbit	MODERN SPECIES	8	SLC24A5 (ENSOCUG00000013038)	MYEF2 (ENSOCUG00000013043)	CTXN2 (ENSOCUG00000026367)	SLC12A1 (ENSOCUG00000016508)	ENSOCUG00000003862	FBN1 (ENSOCUG00000003866)	CEP152 (ENSOCUG00000006424)	EID1 (ENSOCUG00000025492)	SHC4 (ENSOCUG00000006438)	SECISBP2L (ENSOCUG00000006443)	COPS2 (ENSOCUG00000006455)	ENSOCUG00000036138	GALK2 (ENSOCUG00000006461)	FGF7 (ENSOCUG00000006713)	FAM227B (ENSOCUG00000029524)	DTWD1 (ENSOCUG00000016783) ##22	ENSOCUG00000032086	ENSOCUG00000038570	ENSOCUG00000030060	ATP8B4 (ENSOCUG00000008075)	SLC27A2 (ENSOCUG00000016831)	HDC (ENSOCUG00000016840)	GABPB1 (ENSOCUG00000016849)	USP8 (ENSOCUG00000003686)	USP50 (ENSOCUG00000003117)	TRPM7 (ENSOCUG00000003125)	ENSOCUG00000033599	ENSOCUG00000036412	SPPL2A (ENSOCUG00000003710)	ENSOCUG00000039657	AP4E1 (ENSOCUG00000007193)
Pika	MODERN SPECIES	5433																DTWD1 (ENSOPRG00000002951) ##22
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Sciuridae	ANCESTRAL SPECIES	11	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397.p	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Marmotini	ANCESTRAL SPECIES	9	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397.p	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Alpin marmot	MODERN SPECIES	7	SEMA6D (ENSMMMG00000016971)	SLC24A5 (ENSMMMG00000016953)	ENSMMMG00000016819	CTXN2 (ENSMMMG00000016815)	SLC12A1 (ENSMMMG00000016667)	ENSMMMG00000016659	FBN1 (ENSMMMG00000016560)	ENSMMMG00000016537	EID1 (ENSMMMG00000016532)	SHC4 (ENSMMMG00000016518)	SECISBP2L (ENSMMMG00000016511)	COPS2 (ENSMMMG00000016496)	GALK2 (ENSMMMG00000016493)	FGF7 (ENSMMMG00000016487)	FAM227B (ENSMMMG00000016448)	DTWD1 (ENSMMMG00000016435) ##22	ATP8B4 (ENSMMMG00000016394)	SLC27A2 (ENSMMMG00000016383)	HDC (ENSMMMG00000016371)	GABPB1 (ENSMMMG00000016321)	USP8 (ENSMMMG00000016260)	USP50 (ENSMMMG00000016253)	TRPM7 (ENSMMMG00000016191)	SPPL2A (ENSMMMG00000016150)	AP4E1 (ENSMMMG00000016124)	ENSMMMG00000016118	TNFAIP8L3 (ENSMMMG00000016114)	CYP19A1 (ENSMMMG00000016103)	GLDN (ENSMMMG00000016090)	DMXL2 (ENSMMMG00000015955)	SCG3 (ENSMMMG00000015926)
Marmotini_b	ANCESTRAL SPECIES	4	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397.p	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.xb.b	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Arctic ground squirrel	MODERN SPECIES	4	SEMA6D (ENSUPAG00010009526)	SLC24A5 (ENSUPAG00010009513)	MYEF2 (ENSUPAG00010009284)	CTXN2 (ENSUPAG00010009280)	SLC12A1 (ENSUPAG00010008880)	ENSUPAG00010008861	FBN1 (ENSUPAG00010008765)	CEP152 (ENSUPAG00010008621)	EID1 (ENSUPAG00010008597)	SHC4 (ENSUPAG00010008562)	SECISBP2L (ENSUPAG00010008546)	COPS2 (ENSUPAG00010008477)	GALK2 (ENSUPAG00010008458)	FGF7 (ENSUPAG00010008449)	FAM227B (ENSUPAG00010008415)	DTWD1 (ENSUPAG00010008408) ##22	ATP8B4 (ENSUPAG00010008357)	SLC27A2 (ENSUPAG00010008351)	HDC (ENSUPAG00010008336)	GABPB1 (ENSUPAG00010008257)	USP8 (ENSUPAG00010008213)	USP50 (ENSUPAG00010008191)	TRPM7 (ENSUPAG00010008060)	SPPL2A (ENSUPAG00010008000)	AP4E1 (ENSUPAG00010007897)	TNFAIP8L3 (ENSUPAG00010007881)	ENSUPAG00010007875	CYP19A1 (ENSUPAG00010007854)	GLDN (ENSUPAG00010007827)	DMXL2 (ENSUPAG00010007657)	SCG3 (ENSUPAG00010007640)
Squirrel	MODERN SPECIES	71	SEMA6D (ENSSTOG00000015296)	SLC24A5 (ENSSTOG00000007727)	MYEF2 (ENSSTOG00000007740)	CTXN2 (ENSSTOG00000023277)	SLC12A1 (ENSSTOG00000007768)	ENSSTOG00000007811	FBN1 (ENSSTOG00000007824)	CEP152 (ENSSTOG00000003043)	SHC4 (ENSSTOG00000003069)	EID1 (ENSSTOG00000024210)	SECISBP2L (ENSSTOG00000005317)	COPS2 (ENSSTOG00000005348)	GALK2 (ENSSTOG00000005373)	FGF7 (ENSSTOG00000027670)	ENSSTOG00000029469	DTWD1 (ENSSTOG00000005426) ##22	ATP8B4 (ENSSTOG00000002248)	SLC27A2 (ENSSTOG00000021884)	HDC (ENSSTOG00000002266)	GABPB1 (ENSSTOG00000016137)	USP8 (ENSSTOG00000005924)	USP50 (ENSSTOG00000000278)	TRPM7 (ENSSTOG00000000280)	SPPL2A (ENSSTOG00000005136)	AP4E1 (ENSSTOG00000005959)	TNFAIP8L3 (ENSSTOG00000005995)	CYP19A1 (ENSSTOG00000006011)	GLDN (ENSSTOG00000007455)	DMXL2 (ENSSTOG00000029061)	SCG3 (ENSSTOG00000015355)	LYSMD2 (ENSSTOG00000015371)
Eurasian red squirrel	MODERN SPECIES	11	MYEF2 (ENSSVLG00005001267)	CTXN2 (ENSSVLG00005001303)	SLC12A1 (ENSSVLG00005001381)	ENSSVLG00005001505	ENSSVLG00005001592	FBN1 (ENSSVLG00005001645)	ENSSVLG00005001781	ENSSVLG00005001795	CEP152 (ENSSVLG00005001882)	SHC4 (ENSSVLG00005002098)	ENSSVLG00005002146	SECISBP2L (ENSSVLG00005002173)	ENSSVLG00005002244	GALK2 (ENSSVLG00005002344)	FGF7 (ENSSVLG00005002472)	DTWD1 (ENSSVLG00005002492) ##22	ATP8B4 (ENSSVLG00005002514)	SLC27A2 (ENSSVLG00005002589)	HDC (ENSSVLG00005002669)	GABPB1 (ENSSVLG00005002736)	USP8 (ENSSVLG00005002839)	USP50 (ENSSVLG00005002911)	TRPM7 (ENSSVLG00005003021)	SPPL2A (ENSSVLG00005003313)	AP4E1 (ENSSVLG00005003370)	TNFAIP8L3 (ENSSVLG00005003434)	ENSSVLG00005003451	ENSSVLG00005003463	CYP19A1 (ENSSVLG00005003478)	GLDN (ENSSVLG00005003519)	ENSSVLG00005003544
Hystricomorpha	ANCESTRAL SPECIES	15	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00910000144338	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	11	MYEF2 (ENSHGLG00000018166)	CTXN2 (ENSHGLG00000018257)	SLC12A1 (ENSHGLG00000014401)	DUT (ENSHGLG00000011864)	ENSHGLG00000037945	FBN1 (ENSHGLG00000010864)	CEP152 (ENSHGLG00000011145)	EID1 (ENSHGLG00000046420)	SHC4 (ENSHGLG00000011448)	ENSHGLG00000018453	ENSHGLG00000010779	ENSHGLG00000009595	ENSHGLG00000016057	FGF7 (ENSHGLG00000014214)	ENSHGLG00000033635	DTWD1 (ENSHGLG00000048935) ##22	ATP8B4 (ENSHGLG00000012603)	SLC27A2 (ENSHGLG00000011641)	HDC (ENSHGLG00000010588)	GABPB1 (ENSHGLG00000014271)	ENSHGLG00000014701	USP8 (ENSHGLG00000012639)	USP50 (ENSHGLG00000043391)	TRPM7 (ENSHGLG00000013915)	SPPL2A (ENSHGLG00000037024)	ENSHGLG00000012462	TNFAIP8L3 (ENSHGLG00000010967)	ENSHGLG00000039885	ENSHGLG00000009904	NEDD4 (ENSHGLG00000013198)	PRTG (ENSHGLG00000009677)
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000006512	ENSHGLG00000051000	ENSHGLG00000038069	ENSHGLG00000003663	NELL2 (ENSHGLG00000007898)	ENSHGLG00000046575	TMEM117 (ENSHGLG00000004220)	TWF1 (ENSHGLG00000006813)	IRAK4 (ENSHGLG00000007796)	PUS7L (ENSHGLG00000004083)	ENSHGLG00000041765	ADAMTS20 (ENSHGLG00000004720)	ENSHGLG00000032813	ENSHGLG00000020234	PRICKLE1 (ENSHGLG00000047115)	ENSHGLG00000000293 ##22	ENSHGLG00000046097	ENSHGLG00000001417	ENSHGLG00000034923	ENSHGLG00000001325	ENSHGLG00000042057	ENSHGLG00000038728	YAF2 (ENSHGLG00000001299)	GXYLT1 (ENSHGLG00000001208)	ENSHGLG00000001159	ENSHGLG00000040152	PDZRN4 (ENSHGLG00000049703)	ENSHGLG00000007919	ENSHGLG00000047537	CNTN1 (ENSHGLG00000000930)	ENSHGLG00000045827
Hystricomorpha_a	ANCESTRAL SPECIES	18	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00910000144338	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Hystricomorpha_b	ANCESTRAL SPECIES	18	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00910000144338	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Long-tailed chinchilla	MODERN SPECIES	116	SEMA6D (ENSCLAG00000010651)	SLC24A5 (ENSCLAG00000009536)	MYEF2 (ENSCLAG00000008328)	CTXN2 (ENSCLAG00000011672)	SLC12A1 (ENSCLAG00000008362)	DUT (ENSCLAG00000011626)	FBN1 (ENSCLAG00000014723)	CEP152 (ENSCLAG00000012592)	EID1 (ENSCLAG00000008705)	SHC4 (ENSCLAG00000014691)	SECISBP2L (ENSCLAG00000017094)	COPS2 (ENSCLAG00000013374)	GALK2 (ENSCLAG00000012869)	FGF7 (ENSCLAG00000008404)	FAM227B (ENSCLAG00000008942)	DTWD1 (ENSCLAG00000014226) ##22	ATP8B4 (ENSCLAG00000011982)	SLC27A2 (ENSCLAG00000013393)	HDC (ENSCLAG00000011960)	GABPB1 (ENSCLAG00000008550)	ENSCLAG00000007383	USP8 (ENSCLAG00000007502)	USP50 (ENSCLAG00000015654)	TRPM7 (ENSCLAG00000011050)	SPPL2A (ENSCLAG00000012765)	ENSCLAG00000012342	TNFAIP8L3 (ENSCLAG00000012480)	CYP19A1 (ENSCLAG00000012685)	GLDN (ENSCLAG00000009280)	DMXL2 (ENSCLAG00000009860)	SCG3 (ENSCLAG00000007223)
Degu	MODERN SPECIES	146	BLOC1S6 (ENSODEG00000007779)	SQOR (ENSODEG00000008455)	SEMA6D (ENSODEG00000007614)	SLC24A5 (ENSODEG00000010497)	MYEF2 (ENSODEG00000007463)	SLC12A1 (ENSODEG00000009402)	ENSODEG00000008550	FBN1 (ENSODEG00000007689)	CEP152 (ENSODEG00000008644)	ENSODEG00000007307	ENSODEG00000007930	SECISBP2L (ENSODEG00000007846)	ENSODEG00000007686	GALK2 (ENSODEG00000007459)	FGF7 (ENSODEG00000007753)	DTWD1 (ENSODEG00000008473) ##22	ATP8B4 (ENSODEG00000010058)	SLC27A2 (ENSODEG00000007224)	HDC (ENSODEG00000007105)	GABPB1 (ENSODEG00000007002)	ENSODEG00000008671	USP8 (ENSODEG00000007032)	USP50 (ENSODEG00000008119)	TRPM7 (ENSODEG00000008007)	SPPL2A (ENSODEG00000007784)	ENSODEG00000007172	TNFAIP8L3 (ENSODEG00000006955)	CYP19A1 (ENSODEG00000007934)	GLDN (ENSODEG00000010063)	ENSODEG00000019746	DMXL2 (ENSODEG00000007956)
Guinea pig	MODERN SPECIES	23	ENSCPOG00000025021	SEMA6D (ENSCPOG00000006931)	SLC24A5 (ENSCPOG00000010579)	MYEF2 (ENSCPOG00000010584)	CTXN2 (ENSCPOG00000031158)	SLC12A1 (ENSCPOG00000005122)	DUT (ENSCPOG00000024107)	FBN1 (ENSCPOG00000004298)	CEP152 (ENSCPOG00000006518)	ENSCPOG00000006525	EID1 (ENSCPOG00000031608)	SECISBP2L (ENSCPOG00000003442)	COPS2 (ENSCPOG00000003447)	GALK2 (ENSCPOG00000003453)	FGF7 (ENSCPOG00000035241)	DTWD1 (ENSCPOG00000003461) ##22	ATP8B4 (ENSCPOG00000015735)	SLC27A2 (ENSCPOG00000007399)	HDC (ENSCPOG00000027120)	GABPB1 (ENSCPOG00000007407)	USP8 (ENSCPOG00000002205)	USP50 (ENSCPOG00000005401)	TRPM7 (ENSCPOG00000005405)	SPPL2A (ENSCPOG00000014127)	AP4E1 (ENSCPOG00000006153)	TNFAIP8L3 (ENSCPOG00000038999)	CYP19A1 (ENSCPOG00000013810)	GLDN (ENSCPOG00000034580)	DMXL2 (ENSCPOG00000009533)	SCG3 (ENSCPOG00000014093)	LYSMD2 (ENSCPOG00000032986)
Rodentia_B	ANCESTRAL SPECIES	11	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Kangaroo rat	MODERN SPECIES	330	Sqor (ENSDORG00000011465)	ENSDORG00000026845	Sema6d (ENSDORG00000000896)	Slc24a5 (ENSDORG00000015834)	ENSDORG00000015835	Slc12a1 (ENSDORG00000010558)	ENSDORG00000010560	Fbn1 (ENSDORG00000010561)	ENSDORG00000010570	ENSDORG00000010573	ENSDORG00000030215	Secisbp2l (ENSDORG00000008662)	Cops2 (ENSDORG00000006941)	Galk2 (ENSDORG00000011650)	Fgf7 (ENSDORG00000026408)	Dtwd1 (ENSDORG00000011657) ##22	Atp8b4 (ENSDORG00000016492)	Slc27a2 (ENSDORG00000016451)	Hdc (ENSDORG00000016452)	Gabpb1 (ENSDORG00000016453)	Usp8 (ENSDORG00000005653)	Usp50 (ENSDORG00000028003)	Trpm7 (ENSDORG00000000789)	Sppl2a (ENSDORG00000008946)	ENSDORG00000010151	Tnfaip8l3 (ENSDORG00000029156)	Cyp19a1 (ENSDORG00000009484)	Gldn (ENSDORG00000006427)	Dmxl2 (ENSDORG00000002341)	Scg3 (ENSDORG00000015478)	Tmod2 (ENSDORG00000015900)
Myomorpha	ANCESTRAL SPECIES	33	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C
Lesser Egyptian jerboa	MODERN SPECIES	176	Ctxn2 (ENSJJAG00000013770)	Slc12a1 (ENSJJAG00000009847)	Fbn1 (ENSJJAG00000018173)	Eid1 (ENSJJAG00000022180)	Shc4 (ENSJJAG00000021146)	ENSJJAG00000017576	Secisbp2l (ENSJJAG00000014644)	Cops2 (ENSJJAG00000012737)	ENSJJAG00000012276	ENSJJAG00000011858	ENSJJAG00000011328	Galk2 (ENSJJAG00000010967)	Fgf7 (ENSJJAG00000010425)	ENSJJAG00000018894	ENSJJAG00000018025	Dtwd1 (ENSJJAG00000007677) ##22	ENSJJAG00000020065	ENSJJAG00000013820	Atp8b4 (ENSJJAG00000017268)	ENSJJAG00000014259	Slc27a2 (ENSJJAG00000012884)	Hdc (ENSJJAG00000021664)	ENSJJAG00000017952	ENSJJAG00000017463	Usp8 (ENSJJAG00000013596)	Usp50 (ENSJJAG00000009672)	Trpm7 (ENSJJAG00000022636)	Sppl2a (ENSJJAG00000020554)	ENSJJAG00000020341	ENSJJAG00000014367	Scg5 (ENSJJAG00000013555)
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00390000019406	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154
Chinese hamster chok1gshd	MODERN SPECIES	188	Sema6d (ENSCGRG00001005980)	Slc24a5 (ENSCGRG00001014479)	ENSCGRG00001024080	Ctxn2 (ENSCGRG00001010557)	Slc12a1 (ENSCGRG00001018507)	ENSCGRG00001010033	Fbn1 (ENSCGRG00001019162)	Cep152 (ENSCGRG00001000747)	Eid1 (ENSCGRG00001010267)	Shc4 (ENSCGRG00001000927)	Secisbp2l (ENSCGRG00001018900)	Cops2 (ENSCGRG00001014155)	Galk2 (ENSCGRG00001023593)	ENSCGRG00001022441	Fgf7 (ENSCGRG00001021672)	Dtwd1 (ENSCGRG00001011621) ##22	Atp8b4 (ENSCGRG00001023798)	Slc27a2 (ENSCGRG00001021565)	Hdc (ENSCGRG00001023140)	Gabpb1 (ENSCGRG00001022883)	Usp8 (ENSCGRG00001023611)	Usp50 (ENSCGRG00001024172)	ENSCGRG00001020900	Trpm7 (ENSCGRG00001022305)	Sppl2a (ENSCGRG00001004702)	ENSCGRG00001021438	Ap4e1 (ENSCGRG00001023130)	Blvra (ENSCGRG00001002848)	Ncaph (ENSCGRG00001018072)	ENSCGRG00001014240	Snrnp200 (ENSCGRG00001022610)
Golden Hamster	MODERN SPECIES	631	ENSMAUG00000009790	Slc24a5 (ENSMAUG00000010924)	ENSMAUG00000019642	Ctxn2 (ENSMAUG00000008152)	Slc12a1 (ENSMAUG00000004531)	Dut (ENSMAUG00000000956)	Fbn1 (ENSMAUG00000019785)	Cep152 (ENSMAUG00000013711)	ENSMAUG00000021022	Eid1 (ENSMAUG00000009902)	ENSMAUG00000010454	Secisbp2l (ENSMAUG00000012011)	Cops2 (ENSMAUG00000021767)	Galk2 (ENSMAUG00000005751)	Fgf7 (ENSMAUG00000013683)	Dtwd1 (ENSMAUG00000012537) ##22	ENSMAUG00000016470	Atp8b4 (ENSMAUG00000016813)	Slc27a2 (ENSMAUG00000016759)	Hdc (ENSMAUG00000015890)	Gabpb1 (ENSMAUG00000015629)	Usp8 (ENSMAUG00000019997)	Usp50 (ENSMAUG00000019613)	Trpm7 (ENSMAUG00000019210)	Sppl2a (ENSMAUG00000017369)	ENSMAUG00000020694	Blvra (ENSMAUG00000007089)	ENSMAUG00000021041	Itpripl1 (ENSMAUG00000021535)	Snrnp200 (ENSMAUG00000011825)	Ciao1 (ENSMAUG00000021994)
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154
Prairie vole	MODERN SPECIES	81	Sema6d (ENSMOCG00000022881)	Slc24a5 (ENSMOCG00000014049)	ENSMOCG00000006917	Ctxn2 (ENSMOCG00000020162)	Slc12a1 (ENSMOCG00000017261)	Dut (ENSMOCG00000009765)	Fbn1 (ENSMOCG00000016631)	Cep152 (ENSMOCG00000016204)	Shc4 (ENSMOCG00000020474)	Eid1 (ENSMOCG00000003456)	Secisbp2l (ENSMOCG00000014560)	Cops2 (ENSMOCG00000009875)	Galk2 (ENSMOCG00000022778)	Fam227b (ENSMOCG00000002372)	Fgf7 (ENSMOCG00000006067)	Dtwd1 (ENSMOCG00000013946) ##22	Atp8b4 (ENSMOCG00000016392)	Slc27a2 (ENSMOCG00000015520)	Hdc (ENSMOCG00000000576)	Gabpb1 (ENSMOCG00000006290)	Usp8 (ENSMOCG00000011555)	Usp50 (ENSMOCG00000012932)	Trpm7 (ENSMOCG00000012810)	Sppl2a (ENSMOCG00000003985)	ENSMOCG00000019484	Blvra (ENSMOCG00000012856)	Ncaph (ENSMOCG00000002025)	Itpripl1 (ENSMOCG00000009786)	Snrnp200 (ENSMOCG00000011814)	Ciao1 (ENSMOCG00000009518)	Tmem127 (ENSMOCG00000000251)
Northern American deer mouse	MODERN SPECIES	17	Sema6d (ENSPEMG00000019804)	Slc24a5 (ENSPEMG00000008978)	ENSPEMG00000006286	Ctxn2 (ENSPEMG00000000448)	Slc12a1 (ENSPEMG00000008530)	Dut (ENSPEMG00000030951)	ENSPEMG00000029696	Cep152 (ENSPEMG00000005457)	Shc4 (ENSPEMG00000006904)	Eid1 (ENSPEMG00000030985)	Secisbp2l (ENSPEMG00000010577)	Cops2 (ENSPEMG00000016940)	Galk2 (ENSPEMG00000006831)	Fam227b (ENSPEMG00000028378)	Fgf7 (ENSPEMG00000029951)	Dtwd1 (ENSPEMG00000024581) ##22	Atp8b4 (ENSPEMG00000020855)	Slc27a2 (ENSPEMG00000021667)	Hdc (ENSPEMG00000002047)	Gabpb1 (ENSPEMG00000020310)	Usp8 (ENSPEMG00000023169)	Usp50 (ENSPEMG00000020756)	Trpm7 (ENSPEMG00000013989)	ENSPEMG00000030019	ENSPEMG00000026620	Sppl2a (ENSPEMG00000022191)	Ap4e1 (ENSPEMG00000021276)	Blvra (ENSPEMG00000009849)	Ncaph (ENSPEMG00000020773)	ENSPEMG00000020700	Ciao1 (ENSPEMG00000015800)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154
Mus	ANCESTRAL SPECIES	1	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00990000206984	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154
Mus_A	ANCESTRAL SPECIES		ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00990000206984	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154
Mus_B	ANCESTRAL SPECIES	1	ENSGT01030000234532.A.b	ENSGT00940000157397.s	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00990000206984	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154
Mus_C	ANCESTRAL SPECIES		ENSGT01030000234532.A.b	ENSGT00940000157397.s	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00990000206984	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000011072	ENSGT00390000004149	ENSGT01050000244827.D.b.a	ENSGT00940000154966	ENSGT00940000158670	ENSGT00390000005154
Steppe mouse	MODERN SPECIES	3241	Slc24a5 (ENSMSIG00000004534)	Myef2 (ENSMSIG00000004563)	Ctxn2 (ENSMSIG00000004843)	Slc12a1 (ENSMSIG00000004862)	Dut (ENSMSIG00000005269)	Fbn1 (ENSMSIG00000005317)	Cep152 (ENSMSIG00000005487)	Shc4 (ENSMSIG00000005659)	ENSMSIG00000005711	Eid1 (ENSMSIG00000005738)	Secisbp2l (ENSMSIG00000005749)	Cops2 (ENSMSIG00000005796)	Galk2 (ENSMSIG00000005915)	Fam227b (ENSMSIG00000005978)	Fgf7 (ENSMSIG00000006090)	Dtwd1 (ENSMSIG00000006112) ##22
spretus	MODERN SPECIES	11	Myef2 (MGP_SPRETEiJ_G0025141)	MGP_SPRETEiJ_G0025142	Ctxn2 (MGP_SPRETEiJ_G0025143)	Slc12a1 (MGP_SPRETEiJ_G0025144)	Dut (MGP_SPRETEiJ_G0025145)	Fbn1 (MGP_SPRETEiJ_G0025146)	MGP_SPRETEiJ_G0025147	Cep152 (MGP_SPRETEiJ_G0025148)	Shc4 (MGP_SPRETEiJ_G0025149)	Eid1 (MGP_SPRETEiJ_G0025150)	Secisbp2l (MGP_SPRETEiJ_G0025151)	Cops2 (MGP_SPRETEiJ_G0025152)	Galk2 (MGP_SPRETEiJ_G0025153)	Fam227b (MGP_SPRETEiJ_G0025154)	Fgf7 (MGP_SPRETEiJ_G0025155)	Dtwd1 (MGP_SPRETEiJ_G0025156) ##22	Atp8b4 (MGP_SPRETEiJ_G0025157)	Slc27a2 (MGP_SPRETEiJ_G0025158)	Hdc (MGP_SPRETEiJ_G0025159)	Gabpb1 (MGP_SPRETEiJ_G0025160)	Usp8 (MGP_SPRETEiJ_G0025161)	Usp50 (MGP_SPRETEiJ_G0025162)	Trpm7 (MGP_SPRETEiJ_G0025163)	Sppl2a (MGP_SPRETEiJ_G0025164)	Ap4e1 (MGP_SPRETEiJ_G0025165)	Blvra (MGP_SPRETEiJ_G0025166)	Ncaph (MGP_SPRETEiJ_G0025167)	Itpripl1 (MGP_SPRETEiJ_G0025168)	1810024B03Rik (MGP_SPRETEiJ_G0025169)	Snrnp200 (MGP_SPRETEiJ_G0025170)	Ciao1 (MGP_SPRETEiJ_G0025171)
Mouse	MODERN SPECIES	11	Sema6d (ENSMUSG00000027200)	Slc24a5 (ENSMUSG00000035183)	Myef2 (ENSMUSG00000027201)	Ctxn2 (ENSMUSG00000074872)	Slc12a1 (ENSMUSG00000027202)	Dut (ENSMUSG00000027203)	Fbn1 (ENSMUSG00000027204)	Cep152 (ENSMUSG00000068394)	Shc4 (ENSMUSG00000035109)	Eid1 (ENSMUSG00000091337)	Secisbp2l (ENSMUSG00000035093)	Cops2 (ENSMUSG00000027206)	Galk2 (ENSMUSG00000027207)	Fam227b (ENSMUSG00000027209)	Fgf7 (ENSMUSG00000027208)	Dtwd1 (ENSMUSG00000023330) ##22	Atp8b4 (ENSMUSG00000060131)	Slc27a2 (ENSMUSG00000027359)	Hdc (ENSMUSG00000027360)	Gabpb1 (ENSMUSG00000027361)	Usp8 (ENSMUSG00000027363)	Usp50 (ENSMUSG00000027364)	Trpm7 (ENSMUSG00000027365)	Sppl2a (ENSMUSG00000027366)	Ap4e1 (ENSMUSG00000001998)	Blvra (ENSMUSG00000001999)	Ncaph (ENSMUSG00000034906)	Itpripl1 (ENSMUSG00000074825)	1810024B03Rik (ENSMUSG00000044145)	Snrnp200 (ENSMUSG00000003660)	Ciao1 (ENSMUSG00000003662)
Ryukyu mouse	MODERN SPECIES	11	Slc24a5 (MGP_CAROLIEiJ_G0024221)	MGP_CAROLIEiJ_G0024222	Ctxn2 (MGP_CAROLIEiJ_G0024223)	Slc12a1 (MGP_CAROLIEiJ_G0024224)	Dut (MGP_CAROLIEiJ_G0024225)	Fbn1 (MGP_CAROLIEiJ_G0024226)	MGP_CAROLIEiJ_G0024227	Cep152 (MGP_CAROLIEiJ_G0024228)	Shc4 (MGP_CAROLIEiJ_G0024229)	Eid1 (MGP_CAROLIEiJ_G0024230)	Secisbp2l (MGP_CAROLIEiJ_G0024231)	Cops2 (MGP_CAROLIEiJ_G0024232)	Galk2 (MGP_CAROLIEiJ_G0024233)	Fam227b (MGP_CAROLIEiJ_G0024234)	Fgf7 (MGP_CAROLIEiJ_G0024235)	Dtwd1 (MGP_CAROLIEiJ_G0024236) ##22	Atp8b4 (MGP_CAROLIEiJ_G0024237)	Slc27a2 (MGP_CAROLIEiJ_G0024238)	Hdc (MGP_CAROLIEiJ_G0024239)	Gabpb1 (MGP_CAROLIEiJ_G0024240)	Usp8 (MGP_CAROLIEiJ_G0024241)	Usp50 (MGP_CAROLIEiJ_G0024242)	Trpm7 (MGP_CAROLIEiJ_G0024243)	Sppl2a (MGP_CAROLIEiJ_G0024244)	Ap4e1 (MGP_CAROLIEiJ_G0024245)	Blvra (MGP_CAROLIEiJ_G0024246)	Ncaph (MGP_CAROLIEiJ_G0024247)	Itpripl1 (MGP_CAROLIEiJ_G0024248)	MGP_CAROLIEiJ_G0024249	Snrnp200 (MGP_CAROLIEiJ_G0024250)	Ciao1 (MGP_CAROLIEiJ_G0024251)
Shrew mouse	MODERN SPECIES	16	MGP_PahariEiJ_G0025667	MGP_PahariEiJ_G0025668	Ctxn2 (MGP_PahariEiJ_G0025669)	Slc12a1 (MGP_PahariEiJ_G0025670)	Dut (MGP_PahariEiJ_G0025671)	Fbn1 (MGP_PahariEiJ_G0025672)	MGP_PahariEiJ_G0025673	Cep152 (MGP_PahariEiJ_G0025674)	Shc4 (MGP_PahariEiJ_G0025675)	Eid1 (MGP_PahariEiJ_G0025676)	Secisbp2l (MGP_PahariEiJ_G0025677)	Cops2 (MGP_PahariEiJ_G0025678)	Galk2 (MGP_PahariEiJ_G0025679)	Fam227b (MGP_PahariEiJ_G0025680)	Fgf7 (MGP_PahariEiJ_G0025681)	Dtwd1 (MGP_PahariEiJ_G0025682) ##22	MGP_PahariEiJ_G0025683	Slc27a2 (MGP_PahariEiJ_G0025684)	Hdc (MGP_PahariEiJ_G0025685)	Gabpb1 (MGP_PahariEiJ_G0025686)	Usp8 (MGP_PahariEiJ_G0025687)	Usp50 (MGP_PahariEiJ_G0025688)	Trpm7 (MGP_PahariEiJ_G0025689)	MGP_PahariEiJ_G0025690	Ap4e1 (MGP_PahariEiJ_G0025691)	Blvra (MGP_PahariEiJ_G0025692)	Ncaph (MGP_PahariEiJ_G0025693)	Itpripl1 (MGP_PahariEiJ_G0025694)	Snrnp200 (MGP_PahariEiJ_G0025695)	Ciao1 (MGP_PahariEiJ_G0025696)	MGP_PahariEiJ_G0025697
Rat	MODERN SPECIES	13	Myef2 (ENSRNOG00000005258)	Ctxn2 (ENSRNOG00000037146)	Slc12a1 (ENSRNOG00000005367)	Rpl32-ps1 (ENSRNOG00000032605)	Dut (ENSRNOG00000007221)	Fbn1 (ENSRNOG00000007302)	Cep152 (ENSRNOG00000065817)	LOC120101650 (ENSRNOG00000031585)	Shc4 (ENSRNOG00000037134)	Eid1 (ENSRNOG00000008452)	Secisbp2l (ENSRNOG00000008629)	Cops2 (ENSRNOG00000008744)	Galk2 (ENSRNOG00000009289)	Fam227b (ENSRNOG00000037124)	Fgf7 (ENSRNOG00000009425)	Dtwd1 (ENSRNOG00000009593) ##22	Atp8b4 (ENSRNOG00000031598)	Slc27a2 (ENSRNOG00000010128)	Hdc (ENSRNOG00000010262)	Gabpb1 (ENSRNOG00000010659)	Usp8 (ENSRNOG00000010729)	Usp50 (ENSRNOG00000011401)	Trpm7 (ENSRNOG00000057806)	ENSRNOG00000033429	Sppl2a (ENSRNOG00000011652)	Ap4e1 (ENSRNOG00000022938)	Blvra (ENSRNOG00000011778)	Ncaph (ENSRNOG00000012051)	Itpripl1 (ENSRNOG00000012151)	Snrnp200 (ENSRNOG00000012157)	Ciao1 (ENSRNOG00000012638)
Upper Galilee mountains blind mole rat	MODERN SPECIES	767								Fbn1 (ENSNGAG00000005361)	ENSNGAG00000001542	Shc4 (ENSNGAG00000002909)	Eid1 (ENSNGAG00000010287)	Secisbp2l (ENSNGAG00000019213)	Cops2 (ENSNGAG00000009536)	Galk2 (ENSNGAG00000019161)	Fgf7 (ENSNGAG00000017817)	Dtwd1 (ENSNGAG00000019003) ##22	Atp8b4 (ENSNGAG00000020421)	Slc27a2 (ENSNGAG00000023178)	Hdc (ENSNGAG00000011189)	Gabpb1 (ENSNGAG00000017899)	Usp8 (ENSNGAG00000010641)	Trpm7 (ENSNGAG00000004836)	ENSNGAG00000020663	Sppl2a (ENSNGAG00000000975)	ENSNGAG00000022314	Blvra (ENSNGAG00000014028)	Hnrnpa0 (ENSNGAG00000008883)	Klhl3 (ENSNGAG00000021508)	Spock1 (ENSNGAG00000022891)	Trpc7 (ENSNGAG00000015892)	Smim32 (ENSNGAG00000008630)
Primates	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00940000175727	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Strepsirrhini	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00940000175727	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Lemuriformes	ANCESTRAL SPECIES	8	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00940000175727	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Mouse lemur	MODERN SPECIES	22	ENSMICG00000030289	SEMA6D (ENSMICG00000014475)	SLC24A5 (ENSMICG00000014499)	MYEF2 (ENSMICG00000014513)	SLC12A1 (ENSMICG00000013031)	ENSMICG00000013050	FBN1 (ENSMICG00000013056)	CEP152 (ENSMICG00000012585)	EID1 (ENSMICG00000028947)	SHC4 (ENSMICG00000035080)	SECISBP2L (ENSMICG00000013007)	ENSMICG00000035032	GALK2 (ENSMICG00000013027)	FGF7 (ENSMICG00000013048)	FAM227B (ENSMICG00000013037)	DTWD1 (ENSMICG00000032408) ##22	ATP8B4 (ENSMICG00000003484)	SLC27A2 (ENSMICG00000003492)	HDC (ENSMICG00000003503)	GABPB1 (ENSMICG00000027983)	USP8 (ENSMICG00000005859)	USP50 (ENSMICG00000001120)	TRPM7 (ENSMICG00000010294)	SPPL2A (ENSMICG00000010743)	ENSMICG00000047242	ENSMICG00000010752	ENSMICG00000031384	CYP19A1 (ENSMICG00000041874)	GLDN (ENSMICG00000030199)	DMXL2 (ENSMICG00000010807)	SCG3 (ENSMICG00000010286)
Lemuriformes_a	ANCESTRAL SPECIES	1	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Coquerels sifaka	MODERN SPECIES	424	SEMA6D (ENSPCOG00000016613)	SLC24A5 (ENSPCOG00000024898)	MYEF2 (ENSPCOG00000024570)	CTXN2 (ENSPCOG00000007859)	SLC12A1 (ENSPCOG00000020544)	ENSPCOG00000018855	FBN1 (ENSPCOG00000026107)	CEP152 (ENSPCOG00000027728)	SHC4 (ENSPCOG00000015169)	SECISBP2L (ENSPCOG00000014679)	COPS2 (ENSPCOG00000013132)	GALK2 (ENSPCOG00000016316)	ENSPCOG00000027600	ENSPCOG00000027669	FGF7 (ENSPCOG00000025535)	DTWD1 (ENSPCOG00000000343) ##22	ENSPCOG00000027901	ENSPCOG00000009623	ATP8B4 (ENSPCOG00000025693)	SLC27A2 (ENSPCOG00000003546)	HDC (ENSPCOG00000013488)	USP8 (ENSPCOG00000026775)	USP50 (ENSPCOG00000027706)	ENSPCOG00000020743	TRPM7 (ENSPCOG00000028104)	SPPL2A (ENSPCOG00000015701)	AP4E1 (ENSPCOG00000019301)
Greater bamboo lemur	MODERN SPECIES	281														FGF7 (ENSPSMG00000018916)	ENSPSMG00000018907	DTWD1 (ENSPSMG00000018903) ##22	ATP8B4 (ENSPSMG00000018886)	SLC27A2 (ENSPSMG00000018822)	HDC (ENSPSMG00000018805)	GABPB1 (ENSPSMG00000018771)	USP8 (ENSPSMG00000018736)	USP50 (ENSPSMG00000018698)	TRPM7 (ENSPSMG00000018555)	SPPL2A (ENSPSMG00000018360)	AP4E1 (ENSPSMG00000018319)	TNFAIP8L3 (ENSPSMG00000018293)	CYP19A1 (ENSPSMG00000018278)	GLDN (ENSPSMG00000018240)	DMXL2 (ENSPSMG00000018217)	SCG3 (ENSPSMG00000018102)	ENSPSMG00000018061
Bushbaby	MODERN SPECIES	126		SEMA6D (ENSOGAG00000010898)	SLC24A5 (ENSOGAG00000010904)	MYEF2 (ENSOGAG00000010907)	CTXN2 (ENSOGAG00000028186)	SLC12A1 (ENSOGAG00000010916)	DUT (ENSOGAG00000028847)	FBN1 (ENSOGAG00000009566)	CEP152 (ENSOGAG00000013259)	SHC4 (ENSOGAG00000013273)	ENSOGAG00000031612	SECISBP2L (ENSOGAG00000013280)	COPS2 (ENSOGAG00000013284)	GALK2 (ENSOGAG00000013286)	FGF7 (ENSOGAG00000013290)	DTWD1 (ENSOGAG00000013291) ##22	ATP8B4 (ENSOGAG00000002188)	GABPB1 (ENSOGAG00000004640)	ENSOGAG00000034285	SLC27A2 (ENSOGAG00000004637)	HDC (ENSOGAG00000004638)	USP8 (ENSOGAG00000012308)	USP50 (ENSOGAG00000012313)	TRPM7 (ENSOGAG00000012316)	SPPL2A (ENSOGAG00000012784)	AP4E1 (ENSOGAG00000027801)	TNFAIP8L3 (ENSOGAG00000024393)	CYP19A1 (ENSOGAG00000001848)	GLDN (ENSOGAG00000013711)	DMXL2 (ENSOGAG00000013716)	ENSOGAG00000034281
Haplorrhini	ANCESTRAL SPECIES	17	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Tarsier	MODERN SPECIES	3122															ENSTSYG00000028777	DTWD1 (ENSTSYG00000008182) ##22
Simiiformes	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Platyrrhini	ANCESTRAL SPECIES	27	ENSGT00390000019406	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc.q.b	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Cebidae	ANCESTRAL SPECIES	29	ENSGT00390000019406	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc.r	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Cebidae_a	ANCESTRAL SPECIES	52	ENSGT00390000019406	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc.r	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Bolivian squirrel monkey	MODERN SPECIES	73	SLC24A5 (ENSSBOG00000023885)	MYEF2 (ENSSBOG00000029634)	CTXN2 (ENSSBOG00000013318)	SLC12A1 (ENSSBOG00000022213)	ENSSBOG00000034018	FBN1 (ENSSBOG00000024272)	CEP152 (ENSSBOG00000031306)	ENSSBOG00000036086	ENSSBOG00000011389	SHC4 (ENSSBOG00000011457)	SECISBP2L (ENSSBOG00000024354)	COPS2 (ENSSBOG00000024019)	GALK2 (ENSSBOG00000025258)	FGF7 (ENSSBOG00000029304)	FAM227B (ENSSBOG00000021531)	DTWD1 (ENSSBOG00000009376) ##22	ENSSBOG00000020229	ATP8B4 (ENSSBOG00000034767)	ENSSBOG00000033334	SLC27A2 (ENSSBOG00000018319)	HDC (ENSSBOG00000029959)	GABPB1 (ENSSBOG00000023162)	USP8 (ENSSBOG00000028249)	USP50 (ENSSBOG00000023047)	TRPM7 (ENSSBOG00000030864)	SPPL2A (ENSSBOG00000034961)	AP4E1 (ENSSBOG00000035637)	TNFAIP8L3 (ENSSBOG00000035937)	CYP19A1 (ENSSBOG00000032300)	GLDN (ENSSBOG00000026665)	DMXL2 (ENSSBOG00000021879)
Capuchin	MODERN SPECIES	9	ENSCCAG00000023826	SLC24A5 (ENSCCAG00000021714)	MYEF2 (ENSCCAG00000033878)	CTXN2 (ENSCCAG00000020504)	SLC12A1 (ENSCCAG00000028938)	DUT (ENSCCAG00000028726)	FBN1 (ENSCCAG00000025962)	ENSCCAG00000000946	CEP152 (ENSCCAG00000035508)	SHC4 (ENSCCAG00000027114)	SECISBP2L (ENSCCAG00000030509)	COPS2 (ENSCCAG00000034198)	GALK2 (ENSCCAG00000009470)	FGF7 (ENSCCAG00000037731)	FAM227B (ENSCCAG00000030829)	DTWD1 (ENSCCAG00000034288) ##22	ATP8B4 (ENSCCAG00000020420)	SLC27A2 (ENSCCAG00000026466)	HDC (ENSCCAG00000029275)	GABPB1 (ENSCCAG00000020344)	CPA6 (ENSCCAG00000024560)	PREX2 (ENSCCAG00000026088)	C8orf34 (ENSCCAG00000037308)	SULF1 (ENSCCAG00000025158)	SLCO5A1 (ENSCCAG00000038101)	PRDM14 (ENSCCAG00000026032)	ENSCCAG00000026839	NCOA2 (ENSCCAG00000010036)	ENSCCAG00000034778	TRAM1 (ENSCCAG00000019006)	LACTB2 (ENSCCAG00000002927)
Marmoset	MODERN SPECIES	1	ENSCJAG00000078916	SEMA6D (ENSCJAG00000001936)	SLC24A5 (ENSCJAG00000001909)	MYEF2 (ENSCJAG00000001875)	CTXN2 (ENSCJAG00000040189)	SLC12A1 (ENSCJAG00000001821)	DUT (ENSCJAG00000001813)	FBN1 (ENSCJAG00000001735)	CEP152 (ENSCJAG00000001706)	SHC4 (ENSCJAG00000001673)	SECISBP2L (ENSCJAG00000001637)	COPS2 (ENSCJAG00000001585)	GALK2 (ENSCJAG00000001580)	FAM227B (ENSCJAG00000001562)	FGF7 (ENSCJAG00000083241)	DTWD1 (ENSCJAG00000001548) ##22	ATP8B4 (ENSCJAG00000001516)	SLC27A2 (ENSCJAG00000001504)	HDC (ENSCJAG00000001489)	GABPB1 (ENSCJAG00000001449)	USP8 (ENSCJAG00000001378)	TRPM7 (ENSCJAG00000001322)	SPPL2A (ENSCJAG00000001267)	AP4E1 (ENSCJAG00000001217)	TNFAIP8L3 (ENSCJAG00000065209)	ENSCJAG00000073380	CYP19A1 (ENSCJAG00000001188)	GLDN (ENSCJAG00000001160)	ENSCJAG00000078614	DMXL2 (ENSCJAG00000001038)	SCG3 (ENSCJAG00000001016)
Mas night monkey	MODERN SPECIES	664	MYEF2 (ENSANAG00000036558)	CTXN2 (ENSANAG00000012001)	SLC12A1 (ENSANAG00000038497)	ENSANAG00000021483	FBN1 (ENSANAG00000004803)	CEP152 (ENSANAG00000027445)	SHC4 (ENSANAG00000038494)	ENSANAG00000029738	EID1 (ENSANAG00000022853)	SECISBP2L (ENSANAG00000027892)	COPS2 (ENSANAG00000033255)	GALK2 (ENSANAG00000034466)	FAM227B (ENSANAG00000033925)	FGF7 (ENSANAG00000035772)	ENSANAG00000037534	DTWD1 (ENSANAG00000037736) ##22	ATP8B4 (ENSANAG00000029755)	ENSANAG00000020984	SLC27A2 (ENSANAG00000038506)	HDC (ENSANAG00000023809)	GABPB1 (ENSANAG00000025207)	ENSANAG00000022805	ENSANAG00000006271	ENSANAG00000001540	USP8 (ENSANAG00000037924)	ENSANAG00000006598	TRPM7 (ENSANAG00000035495)	SPPL2A (ENSANAG00000020492)	AP4E1 (ENSANAG00000033916)	TNFAIP8L3 (ENSANAG00000032545)	CYP19A1 (ENSANAG00000022843)
Catarrhini	ANCESTRAL SPECIES	20	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000157722.d	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00910000147635	ENSGT00940000158020	ENSGT00390000000096.b.a
Cercopithecidae	ANCESTRAL SPECIES	21	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000157722.d	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00910000147635	ENSGT00940000158020	ENSGT00390000000096.b.a
Rhinopithecus	ANCESTRAL SPECIES	103					ENSGT00940000165725	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00390000001627.f.a.a.a	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Black snub-nosed monkey	MODERN SPECIES	1750														FAM227B (ENSRBIG00000037430)	FGF7 (ENSRBIG00000037223)	DTWD1 (ENSRBIG00000044229) ##22
Golden snub-nosed monkey	MODERN SPECIES	3108											COPS2 (ENSRROG00000041296)	ENSRROG00000009461	ENSRROG00000035058	FGF7 (ENSRROG00000032138)	FAM227B (ENSRROG00000010536)	DTWD1 (ENSRROG00000003611) ##22	ENSRROG00000045562	ATP8B4 (ENSRROG00000041373)	SLC27A2 (ENSRROG00000043255)	HDC (ENSRROG00000031354)	GABPB1 (ENSRROG00000018680)	USP8 (ENSRROG00000032034)	USP50 (ENSRROG00000034198)	TRPM7 (ENSRROG00000032172)	SPPL2A (ENSRROG00000040385)	ENSRROG00000032221	AP4E1 (ENSRROG00000040786)	TNFAIP8L3 (ENSRROG00000041522)	CYP19A1 (ENSRROG00000027796)	GLDN (ENSRROG00000044325)
Cercopithecinae	ANCESTRAL SPECIES	2	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000157722.d	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00910000147635	ENSGT00940000158020	ENSGT00390000000096.b.a.b
Vervet Monkey	MODERN SPECIES	18	SLC24A5 (ENSCSAG00000010355)	MYEF2 (ENSCSAG00000010366)	CTXN2 (ENSCSAG00000019746)	SLC12A1 (ENSCSAG00000010449)	DUT (ENSCSAG00000010486)	FBN1 (ENSCSAG00000010524)	CEP152 (ENSCSAG00000010548)	EID1 (ENSCSAG00000019745)	SHC4 (ENSCSAG00000010594)	ENSCSAG00000010619	SECISBP2L (ENSCSAG00000010632)	COPS2 (ENSCSAG00000010648)	GALK2 (ENSCSAG00000010657)	FGF7 (ENSCSAG00000010662)	FAM227B (ENSCSAG00000010690)	DTWD1 (ENSCSAG00000010703) ##22	ATP8B4 (ENSCSAG00000010829)	SLC27A2 (ENSCSAG00000010869)	HDC (ENSCSAG00000010931)	GABPB1 (ENSCSAG00000010961)	USP8 (ENSCSAG00000010966)	USP50 (ENSCSAG00000010971)	TRPM7 (ENSCSAG00000011086)	SPPL2A (ENSCSAG00000011133)	AP4E1 (ENSCSAG00000011146)	TNFAIP8L3 (ENSCSAG00000011156)	CYP19A1 (ENSCSAG00000011238)	GLDN (ENSCSAG00000011271)	DMXL2 (ENSCSAG00000011292)	SCG3 (ENSCSAG00000011309)	LYSMD2 (ENSCSAG00000011314)
Cercopithecinae_a	ANCESTRAL SPECIES	1	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843.g.a	ENSGT00940000157722.d	ENSGT00940000159843.h	ENSGT00940000162699	ENSGT00940000159843.g.b	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C.b	ENSGT00950000182838.C.a.a	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00910000147635	ENSGT00940000158020
Macaca	ANCESTRAL SPECIES	1	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc.m.b	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b.`b.a	ENSGT00950000183187.A	ENSGT00940000159843.h	ENSGT00940000162699	ENSGT00940000159843.g.b	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C.a.a	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00910000147635	ENSGT00940000158020	ENSGT00390000000096.b.a.b	ENSGT00390000005488
Macaca_a	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc.m.b	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b.`b.a	ENSGT00950000183187.A	ENSGT00940000159843.g.a	ENSGT00940000162699	ENSGT00940000159843.g.b	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C.a.a	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00910000147635	ENSGT00940000158020	ENSGT00390000000096.b.a.b	ENSGT00390000005488
Rhesus	MODERN SPECIES	17	ENSMMUG00000016097	SLC24A5 (ENSMMUG00000018831)	MYEF2 (ENSMMUG00000018834)	CTXN2 (ENSMMUG00000043753)	SLC12A1 (ENSMMUG00000016896)	ENSMMUG00000016898	FBN1 (ENSMMUG00000004239)	CEP152 (ENSMMUG00000009829)	SHC4 (ENSMMUG00000009833)	SECISBP2L (ENSMMUG00000009837)	COPS2 (ENSMMUG00000009838)	GALK2 (ENSMMUG00000009839)	ENSMMUG00000049831	FAM227B (ENSMMUG00000009840)	FGF7 (ENSMMUG00000009842)	DTWD1 (ENSMMUG00000013496) ##22	ENSMMUG00000056522	ENSMMUG00000050608	ATP8B4 (ENSMMUG00000003684)	ENSMMUG00000057283	SLC27A2 (ENSMMUG00000002876)	HDC (ENSMMUG00000002877)	GABPB1 (ENSMMUG00000002879)	USP8 (ENSMMUG00000014884)	USP50 (ENSMMUG00000008574)	TRPM7 (ENSMMUG00000008575)	ENSMMUG00000052556	AP4E1 (ENSMMUG00000015159)	TNFAIP8L3 (ENSMMUG00000001388)	CYP19A1 (ENSMMUG00000002553)	GLDN (ENSMMUG00000005976)
Crab-eating macaque	MODERN SPECIES	17	ENSMFAG00000048453	SLC24A5 (ENSMFAG00000033428)	MYEF2 (ENSMFAG00000046361)	CTXN2 (ENSMFAG00000065829)	SLC12A1 (ENSMFAG00000031713)	DUT (ENSMFAG00000037325)	FBN1 (ENSMFAG00000041075)	CEP152 (ENSMFAG00000040377)	SHC4 (ENSMFAG00000038568)	SECISBP2L (ENSMFAG00000001802)	ENSMFAG00000051616	ENSMFAG00000003309	GALK2 (ENSMFAG00000000451)	FAM227B (ENSMFAG00000035254)	FGF7 (ENSMFAG00000064609)	DTWD1 (ENSMFAG00000058237) ##22	ATP8B4 (ENSMFAG00000034721)	SLC27A2 (ENSMFAG00000038376)	HDC (ENSMFAG00000000845)	GABPB1 (ENSMFAG00000004070)	ENSMFAG00000033355	USP50 (ENSMFAG00000043824)	TRPM7 (ENSMFAG00000031753)	SPPL2A (ENSMFAG00000036983)	AP4E1 (ENSMFAG00000045764)	ENSMFAG00000053030	TNFAIP8L3 (ENSMFAG00000046411)	CYP19A1 (ENSMFAG00000038412)	ENSMFAG00000064052	GLDN (ENSMFAG00000041483)	DMXL2 (ENSMFAG00000035773)
Pig-tailed macaque	MODERN SPECIES	77	SQOR (ENSMNEG00000042129)	SEMA6D (ENSMNEG00000035871)	SLC24A5 (ENSMNEG00000031270)	MYEF2 (ENSMNEG00000028845)	CTXN2 (ENSMNEG00000021715)	SLC12A1 (ENSMNEG00000025405)	ENSMNEG00000041908	FBN1 (ENSMNEG00000031686)	CEP152 (ENSMNEG00000033405)	SHC4 (ENSMNEG00000035410)	SECISBP2L (ENSMNEG00000032007)	COPS2 (ENSMNEG00000029711)	GALK2 (ENSMNEG00000039391)	FGF7 (ENSMNEG00000034668)	FAM227B (ENSMNEG00000037771)	DTWD1 (ENSMNEG00000044996) ##22	ENSMNEG00000042762	ENSMNEG00000005477	ATP8B4 (ENSMNEG00000029784)	SLC27A2 (ENSMNEG00000034842)	HDC (ENSMNEG00000020730)	GABPB1 (ENSMNEG00000031368)	USP8 (ENSMNEG00000023367)	USP50 (ENSMNEG00000033928)	TRPM7 (ENSMNEG00000034322)	SPPL2A (ENSMNEG00000032324)	AP4E1 (ENSMNEG00000034681)	TNFAIP8L3 (ENSMNEG00000005536)	ENSMNEG00000011449	CYP19A1 (ENSMNEG00000037630)	GLDN (ENSMNEG00000042338)
Cercopithecinae_b	ANCESTRAL SPECIES	30	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b.l	ENSGT00940000154796.A	ENSGT00950000182870.a.b.k	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843.g.b	ENSGT00940000157722.d	ENSGT00940000159843.h	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00910000147140	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C.b	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00910000147635	ENSGT00940000158020
Cercopithecinae_d	ANCESTRAL SPECIES	100	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b.l	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000157722.d	ENSGT00940000159843.h	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00910000147140	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C.b	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00910000147635	ENSGT00940000158020
Sooty mangabey	MODERN SPECIES	130	SEMA6D (ENSCATG00000039652)	SLC24A5 (ENSCATG00000041136)	MYEF2 (ENSCATG00000039268)	CTXN2 (ENSCATG00000019704)	SLC12A1 (ENSCATG00000041847)	ENSCATG00000038736	FBN1 (ENSCATG00000019781)	CEP152 (ENSCATG00000014580)	SHC4 (ENSCATG00000039953)	SECISBP2L (ENSCATG00000033967)	COPS2 (ENSCATG00000029862)	GALK2 (ENSCATG00000034152)	FAM227B (ENSCATG00000029979)	ENSCATG00000039047	FGF7 (ENSCATG00000043126)	DTWD1 (ENSCATG00000032469) ##22	ENSCATG00000033138	ATP8B4 (ENSCATG00000013473)	SLC27A2 (ENSCATG00000037910)	HDC (ENSCATG00000042342)	GABPB1 (ENSCATG00000015466)	USP8 (ENSCATG00000043193)	USP50 (ENSCATG00000011670)	TRPM7 (ENSCATG00000038396)	SPPL2A (ENSCATG00000034691)	AP4E1 (ENSCATG00000031112)	TNFAIP8L3 (ENSCATG00000043901)	CYP19A1 (ENSCATG00000023085)	ENSCATG00000000723	GLDN (ENSCATG00000029273)	ENSCATG00000032447
Drill	MODERN SPECIES	1532		SEMA6D (ENSMLEG00000028478)	SLC24A5 (ENSMLEG00000041847)	MYEF2 (ENSMLEG00000038724)	CTXN2 (ENSMLEG00000004850)	SLC12A1 (ENSMLEG00000030368)	ENSMLEG00000032201	FBN1 (ENSMLEG00000032616)	CEP152 (ENSMLEG00000000478)	SHC4 (ENSMLEG00000031373)	SECISBP2L (ENSMLEG00000040214)	COPS2 (ENSMLEG00000000613)	GALK2 (ENSMLEG00000036940)	FAM227B (ENSMLEG00000044467)	FGF7 (ENSMLEG00000040997)	DTWD1 (ENSMLEG00000043983) ##22
Hominoidea	ANCESTRAL SPECIES	20	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000157722.d	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00910000147140.a	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542.o	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00910000147635	ENSGT00940000158020
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	21	SQOR (ENSNLEG00000005894)	SEMA6D (ENSNLEG00000005898)	SLC24A5 (ENSNLEG00000005941)	MYEF2 (ENSNLEG00000005951)	CTXN2 (ENSNLEG00000018907)	SLC12A1 (ENSNLEG00000005967)	DUT (ENSNLEG00000005996)	FBN1 (ENSNLEG00000006015)	CEP152 (ENSNLEG00000006071)	SHC4 (ENSNLEG00000006096)	SECISBP2L (ENSNLEG00000006102)	COPS2 (ENSNLEG00000006127)	GALK2 (ENSNLEG00000006148)	FGF7 (ENSNLEG00000006163)	FAM227B (ENSNLEG00000006158)	DTWD1 (ENSNLEG00000034521) ##22	ENSNLEG00000030399	ENSNLEG00000030237	ATP8B4 (ENSNLEG00000006176)	SLC27A2 (ENSNLEG00000006196)	HDC (ENSNLEG00000006211)	GABPB1 (ENSNLEG00000006227)	ENSNLEG00000031262	USP8 (ENSNLEG00000006246)	ENSNLEG00000032168	ENSNLEG00000034559	TRPM7 (ENSNLEG00000006292)	SPPL2A (ENSNLEG00000006313)	ENSNLEG00000032043	AP4E1 (ENSNLEG00000006329)	ENSNLEG00000006361
Gibbon	MODERN SPECIES	23	ENSNLEG00000018218	GRK7 (ENSNLEG00000004658)	RNF7 (ENSNLEG00000033882)	RASA2 (ENSNLEG00000004575)	ENSNLEG00000036178	ZBTB38 (ENSNLEG00000004569)	PXYLP1 (ENSNLEG00000004544)	ENSNLEG00000034016	ENSNLEG00000033738	SPSB4 (ENSNLEG00000004536)	SLC25A36 (ENSNLEG00000004520)	TRIM42 (ENSNLEG00000004507)	ENSNLEG00000034232	CLSTN2 (ENSNLEG00000004476)	NMNAT3 (ENSNLEG00000004471)	ENSNLEG00000030080 ##22	RBP1 (ENSNLEG00000004461)	RBP2 (ENSNLEG00000004446)	COPB2 (ENSNLEG00000004381)	ENSNLEG00000035567	ENSNLEG00000036042	ENSNLEG00000004379	PIK3CB (ENSNLEG00000004334)	FAIM (ENSNLEG00000004331)	CEP70 (ENSNLEG00000004252)	ESYT3 (ENSNLEG00000004209)	MRAS (ENSNLEG00000004197)	NME9 (ENSNLEG00000004183)	ARMC8 (ENSNLEG00000004156)	DBR1 (ENSNLEG00000032263)	A4GNT (ENSNLEG00000004148)
Hominidae	ANCESTRAL SPECIES	22	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000157722.d	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542.o	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Orangutan	MODERN SPECIES	6	SEMA6D (ENSPPYG00000006450)	SLC24A5 (ENSPPYG00000006451)	MYEF2 (ENSPPYG00000006452)	CTXN2 (ENSPPYG00000035012)	SLC12A1 (ENSPPYG00000006453)	ENSPPYG00000006454	FBN1 (ENSPPYG00000006455)	CEP152 (ENSPPYG00000006456)	SHC4 (ENSPPYG00000006457)	ENSPPYG00000032718	SECISBP2L (ENSPPYG00000006459)	COPS2 (ENSPPYG00000006460)	GALK2 (ENSPPYG00000006463)	FAM227B (ENSPPYG00000006462)	FGF7 (ENSPPYG00000039648)	DTWD1 (ENSPPYG00000006464) ##22	ATP8B4 (ENSPPYG00000006465)	ENSPPYG00000034899	SLC27A2 (ENSPPYG00000006466)	HDC (ENSPPYG00000006467)	GABPB1 (ENSPPYG00000006468)	USP8 (ENSPPYG00000006469)	USP50 (ENSPPYG00000006470)	TRPM7 (ENSPPYG00000006471)	SPPL2A (ENSPPYG00000006472)	AP4E1 (ENSPPYG00000006473)	ENSPPYG00000006474	CYP19A1 (ENSPPYG00000006475)	GLDN (ENSPPYG00000006476)	DMXL2 (ENSPPYG00000029802)	SCG3 (ENSPPYG00000006477)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	22	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000157722.d	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542.o	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	6	SLC24A5 (ENSGGOG00000015163)	MYEF2 (ENSGGOG00000014968)	CTXN2 (ENSGGOG00000024403)	SLC12A1 (ENSGGOG00000000757)	ENSGGOG00000005658	FBN1 (ENSGGOG00000003292)	ENSGGOG00000037122	CEP152 (ENSGGOG00000000404)	SHC4 (ENSGGOG00000010408)	SECISBP2L (ENSGGOG00000007289)	COPS2 (ENSGGOG00000002827)	GALK2 (ENSGGOG00000002838)	FAM227B (ENSGGOG00000042553)	ENSGGOG00000022889	FGF7 (ENSGGOG00000005378)	DTWD1 (ENSGGOG00000027921) ##22	ATP8B4 (ENSGGOG00000015212)	SLC27A2 (ENSGGOG00000006087)	HDC (ENSGGOG00000006092)	GABPB1 (ENSGGOG00000007783)	USP8 (ENSGGOG00000024945)	USP50 (ENSGGOG00000016014)	TRPM7 (ENSGGOG00000027678)	SPPL2A (ENSGGOG00000013154)	AP4E1 (ENSGGOG00000011600)	ENSGGOG00000022663	CYP19A1 (ENSGGOG00000014029)	GLDN (ENSGGOG00000003454)	DMXL2 (ENSGGOG00000014666)	SCG3 (ENSGGOG00000002662)	ENSGGOG00000021952
Gorilla	MODERN SPECIES	16	PLS1 (ENSGGOG00000002849)	ATR (ENSGGOG00000008083)	XRN1 (ENSGGOG00000008047)	GK5 (ENSGGOG00000003657)	TFDP2 (ENSGGOG00000007878)	ATP1B3 (ENSGGOG00000027111)	GRK7 (ENSGGOG00000013256)	RNF7 (ENSGGOG00000001829)	ENSGGOG00000037216	RASA2 (ENSGGOG00000023738)	PXYLP1 (ENSGGOG00000001732)	SPSB4 (ENSGGOG00000011522)	SLC25A36 (ENSGGOG00000024554)	TRIM42 (ENSGGOG00000010587)	CLSTN2 (ENSGGOG00000007929)	ENSGGOG00000014226 ##22	NMNAT3 (ENSGGOG00000012306)	RBP1 (ENSGGOG00000012301)	RBP2 (ENSGGOG00000010274)	ENSGGOG00000005780	ENSGGOG00000039588	MRPS22 (ENSGGOG00000014871)	PRR23C (ENSGGOG00000043485)	PRR23B (ENSGGOG00000036512)	PRR23A (ENSGGOG00000038502)	FOXL2NB (ENSGGOG00000042930)	FOXL2 (ENSGGOG00000024690)	PIK3CB (ENSGGOG00000009579)	FAIM (ENSGGOG00000011492)	CEP70 (ENSGGOG00000010759)	ESYT3 (ENSGGOG00000003902)
Homo/Pan group	ANCESTRAL SPECIES	21	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000157722.d	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542.o	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Human	MODERN SPECIES	6	SEMA6D (ENSG00000137872)	SLC24A5 (ENSG00000188467)	MYEF2 (ENSG00000104177)	CTXN2 (ENSG00000233932)	SLC12A1 (ENSG00000074803)	DUT (ENSG00000128951)	FBN1 (ENSG00000166147)	CEP152 (ENSG00000103995)	SHC4 (ENSG00000185634)	EID1 (ENSG00000255302)	SECISBP2L (ENSG00000138593)	COPS2 (ENSG00000166200)	GALK2 (ENSG00000156958)	FAM227B (ENSG00000166262)	FGF7 (ENSG00000140285)	DTWD1 (ENSG00000104047) ##22	ATP8B4 (ENSG00000104043)	SLC27A2 (ENSG00000140284)	HDC (ENSG00000140287)	GABPB1 (ENSG00000104064)	USP8 (ENSG00000138592)	USP50 (ENSG00000170236)	TRPM7 (ENSG00000092439)	ENSG00000288645	SPPL2A (ENSG00000138600)	AP4E1 (ENSG00000081014)	TNFAIP8L3 (ENSG00000183578)	CYP19A1 (ENSG00000137869)	GLDN (ENSG00000186417)	DMXL2 (ENSG00000104093)	SCG3 (ENSG00000104112)
Pan	ANCESTRAL SPECIES	20	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.jc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000157722.d	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000155753.h	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542.o	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722.c	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Bonobo	DUPLICATION
Bonobo	MODERN SPECIES	6	ENSPPAG00000040924	SLC24A5 (ENSPPAG00000041586)	MYEF2 (ENSPPAG00000041556)	CTXN2 (ENSPPAG00000016328)	SLC12A1 (ENSPPAG00000002733)	DUT (ENSPPAG00000029777)	FBN1 (ENSPPAG00000042323)	CEP152 (ENSPPAG00000040355)	SHC4 (ENSPPAG00000041946)	SECISBP2L (ENSPPAG00000036433)	COPS2 (ENSPPAG00000029471)	GALK2 (ENSPPAG00000039106)	FAM227B (ENSPPAG00000039634)	ENSPPAG00000032776	FGF7 (ENSPPAG00000037132)	DTWD1 (ENSPPAG00000036510) ##22	ATP8B4 (ENSPPAG00000043595)	SLC27A2 (ENSPPAG00000043038)	HDC (ENSPPAG00000038088)	GABPB1 (ENSPPAG00000025781)	USP8 (ENSPPAG00000017138)	USP50 (ENSPPAG00000042168)	TRPM7 (ENSPPAG00000035135)	SPPL2A (ENSPPAG00000028212)	AP4E1 (ENSPPAG00000040835)	ENSPPAG00000035009	CYP19A1 (ENSPPAG00000029532)	GLDN (ENSPPAG00000028473)	DMXL2 (ENSPPAG00000039748)	SCG3 (ENSPPAG00000030999)	ENSPPAG00000040680
Bonobo	MODERN SPECIES	16	ATR (ENSPPAG00000042807)	XRN1 (ENSPPAG00000010180)	GK5 (ENSPPAG00000041760)	TFDP2 (ENSPPAG00000031311)	ENSPPAG00000038971	GRK7 (ENSPPAG00000037494)	RNF7 (ENSPPAG00000036147)	ENSPPAG00000042586	RASA2 (ENSPPAG00000036725)	PXYLP1 (ENSPPAG00000030848)	SPSB4 (ENSPPAG00000029910)	SLC25A36 (ENSPPAG00000030739)	TRIM42 (ENSPPAG00000028240)	ENSPPAG00000041953	CLSTN2 (ENSPPAG00000036614)	ENSPPAG00000044006 ##22	ENSPPAG00000038038	RBP1 (ENSPPAG00000027809)	RBP2 (ENSPPAG00000031530)	COPB2 (ENSPPAG00000035821)	MRPS22 (ENSPPAG00000025143)	ENSPPAG00000027270	ENSPPAG00000003060	PRR23C (ENSPPAG00000039221)	PRR23B (ENSPPAG00000001951)	FOXL2NB (ENSPPAG00000011213)	PIK3CB (ENSPPAG00000031755)	FAIM (ENSPPAG00000036904)	CEP70 (ENSPPAG00000028074)	ESYT3 (ENSPPAG00000018513)	MRAS (ENSPPAG00000036377)
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	6	SLC24A5 (ENSPTRG00000007041)	MYEF2 (ENSPTRG00000007042)	CTXN2 (ENSPTRG00000042182)	SLC12A1 (ENSPTRG00000007043)	DUT (ENSPTRG00000007044)	FBN1 (ENSPTRG00000007046)	ENSPTRG00000049195	CEP152 (ENSPTRG00000007047)	SHC4 (ENSPTRG00000007048)	SECISBP2L (ENSPTRG00000007050)	COPS2 (ENSPTRG00000007051)	GALK2 (ENSPTRG00000007052)	FAM227B (ENSPTRG00000007055)	ENSPTRG00000048941	FGF7 (ENSPTRG00000007057)	DTWD1 (ENSPTRG00000007058) ##22	ENSPTRG00000051661	ATP8B4 (ENSPTRG00000007061)	SLC27A2 (ENSPTRG00000007062)	HDC (ENSPTRG00000007063)	GABPB1 (ENSPTRG00000007064)	USP8 (ENSPTRG00000007065)	USP50 (ENSPTRG00000007067)	TRPM7 (ENSPTRG00000007068)	SPPL2A (ENSPTRG00000007070)	AP4E1 (ENSPTRG00000007072)	TNFAIP8L3 (ENSPTRG00000007073)	CYP19A1 (ENSPTRG00000007074)	GLDN (ENSPTRG00000007075)	DMXL2 (ENSPTRG00000007076)	SCG3 (ENSPTRG00000007077)
Chimpanzee	MODERN SPECIES	16	XRN1 (ENSPTRG00000015482)	GK5 (ENSPTRG00000015480)	TFDP2 (ENSPTRG00000015479)	ATP1B3 (ENSPTRG00000015476)	GRK7 (ENSPTRG00000052431)	RNF7 (ENSPTRG00000039248)	ENSPTRG00000046551	RASA2 (ENSPTRG00000015472)	ZBTB38 (ENSPTRG00000030108)	PXYLP1 (ENSPTRG00000015469)	SPSB4 (ENSPTRG00000015468)	SLC25A36 (ENSPTRG00000015467)	TRIM42 (ENSPTRG00000015465)	ENSPTRG00000044651	CLSTN2 (ENSPTRG00000015463)	ENSPTRG00000045045 ##22	NMNAT3 (ENSPTRG00000015462)	RBP1 (ENSPTRG00000015461)	RBP2 (ENSPTRG00000015460)	COPB2 (ENSPTRG00000015459)	MRPS22 (ENSPTRG00000015458)	ENSPTRG00000045823	ENSPTRG00000049861	PRR23C (ENSPTRG00000030111)	PRR23B (ENSPTRG00000015455)	PRR23A (ENSPTRG00000040873)	FOXL2NB (ENSPTRG00000048064)	PIK3CB (ENSPTRG00000015452)	FAIM (ENSPTRG00000015449)	CEP70 (ENSPTRG00000015448)	ESYT3 (ENSPTRG00000015446)
Laurasiatheria	ANCESTRAL SPECIES	3	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Eulipotyphla	ANCESTRAL SPECIES	132												ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22
Hedgehog	MODERN SPECIES	3252												ENSEEUG00000009115	GALK2 (ENSEEUG00000009162)	FAM227B (ENSEEUG00000009206)	FGF7 (ENSEEUG00000009318)	DTWD1 (ENSEEUG00000009339) ##22
Laurasiatheria_a	ANCESTRAL SPECIES	2	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Artiodactyla	ANCESTRAL SPECIES	3	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Suina	ANCESTRAL SPECIES	12	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.f.a	ENSGT00840000129915.e	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Pig	MODERN SPECIES		SEMA6D (ENSSSCG00000004663)	SLC24A5 (ENSSSCG00000004662)	MYEF2 (ENSSSCG00000004661)	CTXN2 (ENSSSCG00000040204)	SLC12A1 (ENSSSCG00000004659)	DUT (ENSSSCG00000032141)	FBN1 (ENSSSCG00000004658)	CEP152 (ENSSSCG00000004657)	ENSSSCG00000004656	SHC4 (ENSSSCG00000056133)	SECISBP2L (ENSSSCG00000004653)	COPS2 (ENSSSCG00000004652)	GALK2 (ENSSSCG00000004651)	FGF7 (ENSSSCG00000056997)	FAM227B (ENSSSCG00000004648)	DTWD1 (ENSSSCG00000004647) ##22	ATP8B4 (ENSSSCG00000004646)	SLC27A2 (ENSSSCG00000004643)	HDC (ENSSSCG00000004644)	GABPB1 (ENSSSCG00000004645)	USP8 (ENSSSCG00000004639)	USP50 (ENSSSCG00000004638)	ENSSSCG00000034352	TRPM7 (ENSSSCG00000004636)	SPPL2A (ENSSSCG00000004635)	AP4E1 (ENSSSCG00000004634)	TNFAIP8L3 (ENSSSCG00000031794)	ENSSSCG00000054479	CYP19A1 (ENSSSCG00000053670)	ENSSSCG00000030168	GLDN (ENSSSCG00000004632)
Chacoan peccary	MODERN SPECIES	162	ENSCWAG00000010627	SLC24A5 (ENSCWAG00000010661)	MYEF2 (ENSCWAG00000010804)	CTXN2 (ENSCWAG00000010894)	SLC12A1 (ENSCWAG00000010955)	DUT (ENSCWAG00000011642)	FBN1 (ENSCWAG00000012108)	CEP152 (ENSCWAG00000013079)	SHC4 (ENSCWAG00000013443)	ENSCWAG00000013614	SECISBP2L (ENSCWAG00000013654)	COPS2 (ENSCWAG00000013767)	GALK2 (ENSCWAG00000013932)	FAM227B (ENSCWAG00000014030)	FGF7 (ENSCWAG00000014249)	DTWD1 (ENSCWAG00000014288) ##22	ATP8B4 (ENSCWAG00000014354)	ENSCWAG00000014561	ENSCWAG00000014590	SLC27A2 (ENSCWAG00000014655)	HDC (ENSCWAG00000014906)	GABPB1 (ENSCWAG00000015126)	USP8 (ENSCWAG00000015418)	ENSCWAG00000015578	USP50 (ENSCWAG00000015632)	TRPM7 (ENSCWAG00000015732)	SPPL2A (ENSCWAG00000015851)	AP4E1 (ENSCWAG00000015944)	TNFAIP8L3 (ENSCWAG00000016092)	ENSCWAG00000016133	ENSCWAG00000016194
Artiodactyla_a	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Artiodactyla_b	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.fb	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Pecora	ANCESTRAL SPECIES	6	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.eb.a	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.C.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Yarkand deer	MODERN SPECIES	3	SLC24A5 (ENSCHYG00000010192)	MYEF2 (ENSCHYG00000010098)	CTXN2 (ENSCHYG00000010052)	SLC12A1 (ENSCHYG00000009510)	ENSCHYG00000009220	FBN1 (ENSCHYG00000008666)	CEP152 (ENSCHYG00000008408)	ENSCHYG00000008383	ENSCHYG00000008356	SHC4 (ENSCHYG00000008290)	SECISBP2L (ENSCHYG00000008131)	COPS2 (ENSCHYG00000008031)	GALK2 (ENSCHYG00000007932)	FGF7 (ENSCHYG00000007894)	FAM227B (ENSCHYG00000007685)	DTWD1 (ENSCHYG00000007636) ##22	ATP8B4 (ENSCHYG00000007591)	SLC27A2 (ENSCHYG00000007515)	HDC (ENSCHYG00000007411)	GABPB1 (ENSCHYG00000007299)	ENSCHYG00000007280	USP8 (ENSCHYG00000007093)	USP50 (ENSCHYG00000006996)	TRPM7 (ENSCHYG00000006608)	ENSCHYG00000006470	AP4E1 (ENSCHYG00000006273)	TNFAIP8L3 (ENSCHYG00000006220)	GLDN (ENSCHYG00000006071)	DMXL2 (ENSCHYG00000005927)	ENSCHYG00000005885	SCG3 (ENSCHYG00000005796)
Percora_a	ANCESTRAL SPECIES	8	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.eb.a	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.C.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.j	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Siberian musk deer	MODERN SPECIES	257	MYEF2 (ENSMMSG00000011680)	CTXN2 (ENSMMSG00000011671)	SLC12A1 (ENSMMSG00000011169)	ENSMMSG00000010905	FBN1 (ENSMMSG00000010464)	ENSMMSG00000010418	ENSMMSG00000010395	CEP152 (ENSMMSG00000010287)	ENSMMSG00000010244	SHC4 (ENSMMSG00000010146)	SECISBP2L (ENSMMSG00000010062)	COPS2 (ENSMMSG00000009947)	GALK2 (ENSMMSG00000009852)	FGF7 (ENSMMSG00000009828)	FAM227B (ENSMMSG00000009713)	DTWD1 (ENSMMSG00000009668) ##22	ATP8B4 (ENSMMSG00000009612)	SLC27A2 (ENSMMSG00000009495)	HDC (ENSMMSG00000009304)	GABPB1 (ENSMMSG00000009079)	USP8 (ENSMMSG00000008930)	USP50 (ENSMMSG00000008838)	TRPM7 (ENSMMSG00000008711)	SPPL2A (ENSMMSG00000008629)	AP4E1 (ENSMMSG00000008584)	TNFAIP8L3 (ENSMMSG00000008559)	CYP19A1 (ENSMMSG00000008477)	GLDN (ENSMMSG00000008387)	ENSMMSG00000008364	DMXL2 (ENSMMSG00000008260)	SCG3 (ENSMMSG00000008191)
Bovidae	ANCESTRAL SPECIES	7	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.eb.a	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.j	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Caprinae	ANCESTRAL SPECIES	11	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.fb	ENSGT00950000183158.D.b.f	ENSGT00990000208676	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.i	ENSGT00840000129915.j	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Goat	MODERN SPECIES	1	MYEF2 (ENSCHIG00000022164)	CTXN2 (ENSCHIG00000013170)	SLC12A1 (ENSCHIG00000020238)	ENSCHIG00000010553	FBN1 (ENSCHIG00000021045)	ENSCHIG00000016675	ENSCHIG00000008960	CEP152 (ENSCHIG00000020655)	SHC4 (ENSCHIG00000013813)	ENSCHIG00000007799	SECISBP2L (ENSCHIG00000017527)	COPS2 (ENSCHIG00000021490)	GALK2 (ENSCHIG00000021093)	FGF7 (ENSCHIG00000015574)	ENSCHIG00000020807	DTWD1 (ENSCHIG00000011812) ##22	ATP8B4 (ENSCHIG00000020664)	SLC27A2 (ENSCHIG00000016543)	HDC (ENSCHIG00000017262)	GABPB1 (ENSCHIG00000010179)	USP8 (ENSCHIG00000013071)	USP50 (ENSCHIG00000010248)	TRPM7 (ENSCHIG00000012697)	SPPL2A (ENSCHIG00000020318)	AP4E1 (ENSCHIG00000013640)	TNFAIP8L3 (ENSCHIG00000022861)	ENSCHIG00000019271	CYP19A1 (ENSCHIG00000019108)	GLDN (ENSCHIG00000025761)	DMXL2 (ENSCHIG00000012762)	SCG3 (ENSCHIG00000025094)
Rambouillet Sheep	MODERN SPECIES	23	SLC24A5 (ENSOARG00020008222)	MYEF2 (ENSOARG00020007659)	CTXN2 (ENSOARG00020007622)	SLC12A1 (ENSOARG00020007145)	ENSOARG00020006888	FBN1 (ENSOARG00020006413)	ENSOARG00020006361	CEP152 (ENSOARG00020006167)	ENSOARG00020006136	SHC4 (ENSOARG00020006073)	SECISBP2L (ENSOARG00020005980)	COPS2 (ENSOARG00020005884)	GALK2 (ENSOARG00020005733)	FGF7 (ENSOARG00020005708)	FAM227B (ENSOARG00020005651)	DTWD1 (ENSOARG00020005620) ##22	ATP8B4 (ENSOARG00020005521)	SLC27A2 (ENSOARG00020005413)	HDC (ENSOARG00020005236)	GABPB1 (ENSOARG00020005089)	USP50 (ENSOARG00020005040)	USP8 (ENSOARG00020004691)	TRPM7 (ENSOARG00020003229)	SPPL2A (ENSOARG00020003032)	AP4E1 (ENSOARG00020025796)	TNFAIP8L3 (ENSOARG00020025791)	ENSOARG00020025789	CYP19 (ENSOARG00020025784)	GLDN (ENSOARG00020025773)	DMXL2 (ENSOARG00020025748)	SCG3 (ENSOARG00020025738)
Bovinae	ANCESTRAL SPECIES	11	ENSGT00390000019406	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.eb.a	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.j	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Bos	ANCESTRAL SPECIES	13	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.eb.a	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.C.b.a	ENSGT00940000165319	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.j	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000000378.d.b.gb.c.a	ENSGT00390000005488
Bos_a	ANCESTRAL SPECIES	1	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.eb.a	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C.b.a	ENSGT00940000165319	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.j	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000000378.d.b.gb.c.a	ENSGT00390000005488
Domestic yak	MODERN SPECIES	2	MYEF2 (ENSBGRG00000017891)	CTXN2 (ENSBGRG00000017870)	SLC12A1 (ENSBGRG00000016691)	ENSBGRG00000016185	FBN1 (ENSBGRG00000015364)	CEP152 (ENSBGRG00000015031)	ENSBGRG00000014994	ENSBGRG00000014971	SHC4 (ENSBGRG00000014591)	SECISBP2L (ENSBGRG00000014018)	COPS2 (ENSBGRG00000013413)	ENSBGRG00000013382	GALK2 (ENSBGRG00000013156)	FGF7 (ENSBGRG00000013093)	FAM227B (ENSBGRG00000012687)	DTWD1 (ENSBGRG00000012645) ##22	ATP8B4 (ENSBGRG00000012550)	SLC27A2 (ENSBGRG00000012326)	HDC (ENSBGRG00000011998)	GABPB1 (ENSBGRG00000011755)	ENSBGRG00000011710	USP8 (ENSBGRG00000011116)	USP50 (ENSBGRG00000010940)	ENSBGRG00000010845	TRPM7 (ENSBGRG00000010039)	SPPL2A (ENSBGRG00000009830)	AP4E1 (ENSBGRG00000009637)	TNFAIP8L3 (ENSBGRG00000009620)	ENSBGRG00000009541	GLDN (ENSBGRG00000009477)	DMXL2 (ENSBGRG00000009228)
Wild yak	MODERN SPECIES	466	SLC24A5 (ENSBMUG00000022049)	MYEF2 (ENSBMUG00000022127)	CTXN2 (ENSBMUG00000022141)	SLC12A1 (ENSBMUG00000022289)	DUT (ENSBMUG00000022418)	FBN1 (ENSBMUG00000022470)	CEP152 (ENSBMUG00000022594)	SHC4 (ENSBMUG00000022626)	ENSBMUG00000022634	ENSBMUG00000022639	SECISBP2L (ENSBMUG00000022665)	COPS2 (ENSBMUG00000022696)	GALK2 (ENSBMUG00000022709)	FAM227B (ENSBMUG00000022722)	FGF7 (ENSBMUG00000022736)	DTWD1 (ENSBMUG00000022741) ##22	ATP8B4 (ENSBMUG00000022768)	SLC27A2 (ENSBMUG00000022791)
Bos_b	ANCESTRAL SPECIES	11	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.eb.a	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.C.b.a	ENSGT00940000165319	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.j	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000000378.d.b.gb.c.a	ENSGT00390000005488
Cow	MODERN SPECIES	1	SLC24A5 (ENSBTAG00000004854)	MYEF2 (ENSBTAG00000008771)	CTXN2 (ENSBTAG00000045847)	SLC12A1 (ENSBTAG00000010145)	DUT (ENSBTAG00000011998)	FBN1 (ENSBTAG00000002278)	CEP152 (ENSBTAG00000011661)	EID1 (ENSBTAG00000027764)	ENSBTAG00000005217	SHC4 (ENSBTAG00000022583)	SECISBP2L (ENSBTAG00000046553)	COPS2 (ENSBTAG00000013425)	GALK2 (ENSBTAG00000004011)	FGF7 (ENSBTAG00000051898)	FAM227B (ENSBTAG00000053150)	DTWD1 (ENSBTAG00000006201) ##22	ATP8B4 (ENSBTAG00000011936)	SLC27A2 (ENSBTAG00000004303)	HDC (ENSBTAG00000009911)	ENSBTAG00000054826	GABPB1 (ENSBTAG00000022801)	USP50 (ENSBTAG00000011929)	ENSBTAG00000052971	USP8 (ENSBTAG00000011916)	TRPM7 (ENSBTAG00000031165)	SPPL2A (ENSBTAG00000011831)	AP4E1 (ENSBTAG00000013616)	TNFAIP8L3 (ENSBTAG00000010472)	CYP19A1 (ENSBTAG00000014890)	GLDN (ENSBTAG00000002576)	DMXL2 (ENSBTAG00000000737)
Hybrid Bos Indicus	MODERN SPECIES	1	CTXN2 (ENSBIXG00005001891)	SLC12A1 (ENSBIXG00005014377)	DUT (ENSBIXG00005014535)	FBN1 (ENSBIXG00005014593)	CEP152 (ENSBIXG00005002058)	ENSBIXG00005014729	ENSBIXG00005014751	SHC4 (ENSBIXG00005014771)	ENSBIXG00005014780	SECISBP2L (ENSBIXG00005014835)	COPS2 (ENSBIXG00005014970)	GALK2 (ENSBIXG00005015016)	ENSBIXG00005015037	FGF7 (ENSBIXG00005007016)	FAM227B (ENSBIXG00005015185)	DTWD1 (ENSBIXG00005015228) ##22	ATP8B4 (ENSBIXG00005015376)	SLC27A2 (ENSBIXG00005015472)	HDC (ENSBIXG00005015532)	ENSBIXG00005015549	GABPB1 (ENSBIXG00005015740)	USP8 (ENSBIXG00005015842)	USP50 (ENSBIXG00005002497)	ENSBIXG00005015898	TRPM7 (ENSBIXG00005000101)	SPPL2A (ENSBIXG00005002553)	ENSBIXG00005002557	AP4E1 (ENSBIXG00005016092)	TNFAIP8L3 (ENSBIXG00005007460)	CYP19A1 (ENSBIXG00005002570)	GLDN (ENSBIXG00005002586)
American bison	MODERN SPECIES	3046	SEMA6D (ENSBBBG00000000418)	SLC24A5 (ENSBBBG00000000353)	MYEF2 (ENSBBBG00000023298)	CTXN2 (ENSBBBG00000023315)	SLC12A1 (ENSBBBG00000023647)	DUT (ENSBBBG00000023725)	FBN1 (ENSBBBG00000008419)	CEP152 (ENSBBBG00000007294)	ENSBBBG00000008317	SHC4 (ENSBBBG00000023940)	SECISBP2L (ENSBBBG00000024009)	COPS2 (ENSBBBG00000006261)	GALK2 (ENSBBBG00000006282)	FGF7 (ENSBBBG00000024162)	FAM227B (ENSBBBG00000024210)	DTWD1 (ENSBBBG00000024231) ##22	ATP8B4 (ENSBBBG00000024325)	SLC27A2 (ENSBBBG00000008894)	HDC (ENSBBBG00000024497)	GABPB1 (ENSBBBG00000024554)	USP8 (ENSBBBG00000006450)	USP50 (ENSBBBG00000000210)	ENSBBBG00000000206	TRPM7 (ENSBBBG00000006819)	SPPL2A (ENSBBBG00000008228)	AP4E1 (ENSBBBG00000024954)	TNFAIP8L3 (ENSBBBG00000006591)	CYP19A1 (ENSBBBG00000025027)	GLDN (ENSBBBG00000025074)	DMXL2 (ENSBBBG00000007858)	SCG3 (ENSBBBG00000025459)
Cetacea	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397.y	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.fb.a.a	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.h.b	ENSGT00840000129915.g	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397.y	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.fb.a.a	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157455.d	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.h.b	ENSGT00840000129915.g	ENSGT00940000158020	ENSGT00390000000096.b.a
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397.y	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.fb.a.a	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157455.d	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.h.b	ENSGT00840000129915.g	ENSGT00940000158020	ENSGT00390000000096.b.a
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397.y	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.fb.b	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157455.d	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.h.b	ENSGT00840000129915.g	ENSGT00940000158020	ENSGT00390000000096.b.a
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397.y	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.fb.b	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157455.d	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915.h.b	ENSGT00840000129915.g	ENSGT00940000158020
Beluga whale	MODERN SPECIES	6	SLC24A5 (ENSDLEG00000006685)	MYEF2 (ENSDLEG00000006582)	CTXN2 (ENSDLEG00000006560)	SLC12A1 (ENSDLEG00000006236)	DUT (ENSDLEG00000006173)	FBN1 (ENSDLEG00000002928)	CEP152 (ENSDLEG00000002321)	EID1 (ENSDLEG00000002309)	SHC4 (ENSDLEG00000002283)	SECISBP2L (ENSDLEG00000002258)	ENSDLEG00000002252	COPS2 (ENSDLEG00000002228)	GALK2 (ENSDLEG00000002218)	FGF7 (ENSDLEG00000002210)	ENSDLEG00000002194	DTWD1 (ENSDLEG00000002176) ##22	ATP8B4 (ENSDLEG00000002139)	ENSDLEG00000002132	SLC27A2 (ENSDLEG00000002116)	HDC (ENSDLEG00000002055)	GABPB1 (ENSDLEG00000002033)	ENSDLEG00000002028	USP8 (ENSDLEG00000002010)	USP50 (ENSDLEG00000001975)	TRPM7 (ENSDLEG00000000688)	SPPL2A (ENSDLEG00000000286)	AP4E1 (ENSDLEG00000000211)	TNFAIP8L3 (ENSDLEG00000000192)	ENSDLEG00000000169	ENSDLEG00000000096	GLDN (ENSDLEG00000000055)
Narwhal	MODERN SPECIES	308	SLC24A5 (ENSMMNG00015009832)	CTXN2 (ENSMMNG00015009812)	MYEF2 (ENSMMNG00015009800)	SLC12A1 (ENSMMNG00015009684)	ENSMMNG00015009615	FBN1 (ENSMMNG00015009350)	CEP152 (ENSMMNG00015009292)	ENSMMNG00015009285	SHC4 (ENSMMNG00015012494)	SECISBP2L (ENSMMNG00015012466)	ENSMMNG00015012444	COPS2 (ENSMMNG00015012398)	GALK2 (ENSMMNG00015012300)	FGF7 (ENSMMNG00015012274)	FAM227B (ENSMMNG00015012255)	DTWD1 (ENSMMNG00015012231) ##22	ATP8B4 (ENSMMNG00015012192)	SLC27A2 (ENSMMNG00015012162)	HDC (ENSMMNG00015012111)	GABPB1 (ENSMMNG00015012066)	ENSMMNG00015012050	USP8 (ENSMMNG00015012008)	USP50 (ENSMMNG00015011969)	TRPM7 (ENSMMNG00015011878)	SPPL2A (ENSMMNG00015011842)	AP4E1 (ENSMMNG00015011800)	TNFAIP8L3 (ENSMMNG00015011780)	ENSMMNG00015011765	ENSMMNG00015011743	GLDN (ENSMMNG00015011725)	CHRNA7 (ENSMMNG00015011644)
Vaquita	MODERN SPECIES	11	SLC24A5 (ENSPSNG00000001931)	MYEF2 (ENSPSNG00000001875)	CTXN2 (ENSPSNG00000001834)	SLC12A1 (ENSPSNG00000001705)	ENSPSNG00000001566	FBN1 (ENSPSNG00000001444)	CEP152 (ENSPSNG00000001370)	ENSPSNG00000001325	SHC4 (ENSPSNG00000001282)	SECISBP2L (ENSPSNG00000001195)	ENSPSNG00000001137	COPS2 (ENSPSNG00000001079)	GALK2 (ENSPSNG00000000985)	FGF7 (ENSPSNG00000000924)	FAM227B (ENSPSNG00000000877)	DTWD1 (ENSPSNG00000000835) ##22	ATP8B4 (ENSPSNG00000000704)	SLC27A2 (ENSPSNG00000000629)	HDC (ENSPSNG00000000543)	GABPB1 (ENSPSNG00000000475)	ENSPSNG00000000442	ENSPSNG00000000424	USP8 (ENSPSNG00000000360)	USP50 (ENSPSNG00000000254)	TRPM7 (ENSPSNG00000000210)	SPPL2A (ENSPSNG00000000157)	AP4E1 (ENSPSNG00000000121)	TNFAIP8L3 (ENSPSNG00000000040)	ENSPSNG00000003950	ENSPSNG00000003922	ENSPSNG00000003906
Dolphin	MODERN SPECIES	1637													COPS2 (ENSTTRG00000000462)	GALK2 (ENSTTRG00000000464)	FAM227B (ENSTTRG00000000466)	DTWD1 (ENSTTRG00000000467) ##22
Sperm whale	MODERN SPECIES	2	SEMA6D (ENSPCTG00005016729)	SLC24A5 (ENSPCTG00005016485)	MYEF2 (ENSPCTG00005016362)	CTXN2 (ENSPCTG00005016323)	SLC12A1 (ENSPCTG00005015544)	ENSPCTG00005015021	FBN1 (ENSPCTG00005014246)	CEP152 (ENSPCTG00005014169)	EID1 (ENSPCTG00005014143)	SHC4 (ENSPCTG00005013829)	SECISBP2L (ENSPCTG00005013698)	COPS2 (ENSPCTG00005013416)	GALK2 (ENSPCTG00005013239)	FGF7 (ENSPCTG00005013150)	FAM227B (ENSPCTG00005012868)	DTWD1 (ENSPCTG00005012831) ##22	ATP8B4 (ENSPCTG00005012571)	SLC27A2 (ENSPCTG00005012273)	HDC (ENSPCTG00005012031)	GABPB1 (ENSPCTG00005011636)	ENSPCTG00005011605	USP8 (ENSPCTG00005011258)	USP50 (ENSPCTG00005011145)	TRPM7 (ENSPCTG00005010932)	SPPL2A (ENSPCTG00005010807)	AP4E1 (ENSPCTG00005010739)	TNFAIP8L3 (ENSPCTG00005010714)	ENSPCTG00005010682	ENSPCTG00005010575	ENSPCTG00005010408	GLDN (ENSPCTG00005010257)
Blue whale	MODERN SPECIES	11	SLC24A5 (ENSBMSG00010001301)	ENSBMSG00010001257	CTXN2 (ENSBMSG00010001235)	SLC12A1 (ENSBMSG00010001064)	ENSBMSG00010000939	FBN1 (ENSBMSG00010000886)	CEP152 (ENSBMSG00010000790)	ENSBMSG00010000767	SHC4 (ENSBMSG00010000726)	SECISBP2L (ENSBMSG00010000662)	ENSBMSG00010000637	COPS2 (ENSBMSG00010000546)	GALK2 (ENSBMSG00010000446)	FGF7 (ENSBMSG00010000387)	FAM227B (ENSBMSG00010000310)	DTWD1 (ENSBMSG00010000263) ##22	ATP8B4 (ENSBMSG00010000210)	SLC27A2 (ENSBMSG00010000133)	HDC (ENSBMSG00010000060)	GABPB1 (ENSBMSG00010000014)	ENSBMSG00010000006	ENSBMSG00010004870	USP8 (ENSBMSG00010004840)	ENSBMSG00010004816	USP50 (ENSBMSG00010004807)	TRPM7 (ENSBMSG00010004784)	SPPL2A (ENSBMSG00010004699)	AP4E1 (ENSBMSG00010004683)	TNFAIP8L3 (ENSBMSG00010004677)	ENSBMSG00010004669	ENSBMSG00010004647
Camelidae	ANCESTRAL SPECIES	23	ENSGT00390000019406	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Arabian camel	MODERN SPECIES	32	SEMA6D (ENSCDRG00005007458)	SLC24A5 (ENSCDRG00005007294)	MYEF2 (ENSCDRG00005006730)	SLC12A1 (ENSCDRG00005006494)	DUT (ENSCDRG00005006369)	ENSCDRG00005020063	FBN1 (ENSCDRG00005019854)	CEP152 (ENSCDRG00005019796)	ENSCDRG00005019782	SHC4 (ENSCDRG00005019741)	SECISBP2L (ENSCDRG00005019710)	COPS2 (ENSCDRG00005019662)	GALK2 (ENSCDRG00005019606)	FGF7 (ENSCDRG00005019583)	FAM227B (ENSCDRG00005019494)	DTWD1 (ENSCDRG00005019472) ##22	ENSCDRG00005019464	ATP8B4 (ENSCDRG00005019304)	SLC27A2 (ENSCDRG00005019239)	HDC (ENSCDRG00005019210)	GABPB1 (ENSCDRG00005019093)	USP8 (ENSCDRG00005018956)	USP50 (ENSCDRG00005018896)	TRPM7 (ENSCDRG00005018732)	SPPL2A (ENSCDRG00005018587)	AP4E1 (ENSCDRG00005018470)	ENSCDRG00005018450	TNFAIP8L3 (ENSCDRG00005018434)	ENSCDRG00005018413	ENSCDRG00005018295	ENSCDRG00005018244
Alpaca	MODERN SPECIES	699											SECISBP2L (ENSVPAG00000008350)	COPS2 (ENSVPAG00000008353)	GALK2 (ENSVPAG00000008354)	FAM227B (ENSVPAG00000008355)	FGF7 (ENSVPAG00000008357)	DTWD1 (ENSVPAG00000008358) ##22
Laurasiatheria_b	ANCESTRAL SPECIES	3	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Carnivora	ANCESTRAL SPECIES		ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.B	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Felidae	ANCESTRAL SPECIES	1	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.lb	ENSGT00950000183158.D.b.f	ENSGT00950000183178.a.q.b	ENSGT00950000182870.b	ENSGT00940000154796.B.a	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Panthera	ANCESTRAL SPECIES	3	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.lb	ENSGT00950000183158.D.b.f	ENSGT00950000183178.a.q.b	ENSGT00950000182870.b	ENSGT00940000154796.B.a	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Tiger	MODERN SPECIES	164	SEMA6D (ENSPTIG00000017647)	SLC24A5 (ENSPTIG00000017866)	MYEF2 (ENSPTIG00000018122)	CTXN2 (ENSPTIG00000010009)	SLC12A1 (ENSPTIG00000018600)	ENSPTIG00000018717	FBN1 (ENSPTIG00000019693)	ENSPTIG00000010027	CEP152 (ENSPTIG00000019993)	SHC4 (ENSPTIG00000020302)	SECISBP2L (ENSPTIG00000020397)	COPS2 (ENSPTIG00000020654)	GALK2 (ENSPTIG00000020813)	FAM227B (ENSPTIG00000020869)	FGF7 (ENSPTIG00000021005)	DTWD1 (ENSPTIG00000021009) ##22	ATP8B4 (ENSPTIG00000021109)	SLC27A2 (ENSPTIG00000021187)	HDC (ENSPTIG00000021216)	GABPB1 (ENSPTIG00000021282)	USP8 (ENSPTIG00000002185)	USP50 (ENSPTIG00000005189)	TRPM7 (ENSPTIG00000005333)	SPPL2A (ENSPTIG00000006401)	AP4E1 (ENSPTIG00000006634)	TNFAIP8L3 (ENSPTIG00000007180)	CYP19A1 (ENSPTIG00000007208)	GLDN (ENSPTIG00000007531)	DMXL2 (ENSPTIG00000007927)	SCG3 (ENSPTIG00000008694)	LYSMD2 (ENSPTIG00000008775)
Panthera_a	ANCESTRAL SPECIES	15	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.lb	ENSGT00950000183158.D.b.f	ENSGT00950000183178.a.q.b	ENSGT00950000182870.b	ENSGT00940000154796.B.a	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
lion	MODERN SPECIES	6	SLC24A5 (ENSPLOG00000005120)	MYEF2 (ENSPLOG00000005065)	CTXN2 (ENSPLOG00000004969)	SLC12A1 (ENSPLOG00000004906)	ENSPLOG00000004839	FBN1 (ENSPLOG00000004746)	ENSPLOG00000004708	CEP152 (ENSPLOG00000004689)	ENSPLOG00000004679	SHC4 (ENSPLOG00000004670)	SECISBP2L (ENSPLOG00000004627)	COPS2 (ENSPLOG00000004545)	GALK2 (ENSPLOG00000004516)	FGF7 (ENSPLOG00000004498)	FAM227B (ENSPLOG00000004481)	DTWD1 (ENSPLOG00000004458) ##22	ATP8B4 (ENSPLOG00000004439)	SLC27A2 (ENSPLOG00000004404)	HDC (ENSPLOG00000004333)	GABPB1 (ENSPLOG00000004287)	USP8 (ENSPLOG00000004238)	USP50 (ENSPLOG00000004168)	TRPM7 (ENSPLOG00000004113)	SPPL2A (ENSPLOG00000004068)	AP4E1 (ENSPLOG00000003996)	TNFAIP8L3 (ENSPLOG00000003984)	CYP19A1 (ENSPLOG00000003924)	GLDN (ENSPLOG00000003902)	DMXL2 (ENSPLOG00000003858)	SCG3 (ENSPLOG00000003820)	LYSMD2 (ENSPLOG00000003797)
leopard	MODERN SPECIES	7	SEMA6D (ENSPPRG00000009330)	SLC24A5 (ENSPPRG00000009506)	MYEF2 (ENSPPRG00000011446)	CTXN2 (ENSPPRG00000020991)	SLC12A1 (ENSPPRG00000012425)	ENSPPRG00000012937	FBN1 (ENSPPRG00000014404)	ENSPPRG00000021032	CEP152 (ENSPPRG00000018946)	SHC4 (ENSPPRG00000020015)	SECISBP2L (ENSPPRG00000020790)	COPS2 (ENSPPRG00000021768)	GALK2 (ENSPPRG00000022401)	FGF7 (ENSPPRG00000023084)	FAM227B (ENSPPRG00000022749)	DTWD1 (ENSPPRG00000000110) ##22	ATP8B4 (ENSPPRG00000000188)	SLC27A2 (ENSPPRG00000000405)	HDC (ENSPPRG00000000476)	ENSPPRG00000000513	USP8 (ENSPPRG00000000842)	USP50 (ENSPPRG00000001186)	TRPM7 (ENSPPRG00000001988)	SPPL2A (ENSPPRG00000002067)	AP4E1 (ENSPPRG00000002161)	TNFAIP8L3 (ENSPPRG00000002310)	CYP19A1 (ENSPPRG00000002648)	GLDN (ENSPPRG00000002808)	DMXL2 (ENSPPRG00000004050)	SCG3 (ENSPPRG00000004290)	LYSMD2 (ENSPPRG00000004327)
Cat	MODERN SPECIES	237	SEMA6D (ENSFCAG00000010985)	SLC24A5 (ENSFCAG00000022887)	MYEF2 (ENSFCAG00000027198)	SLC12A1 (ENSFCAG00000015347)	ENSFCAG00000015350	FBN1 (ENSFCAG00000015352)	ENSFCAG00000035975	CEP152 (ENSFCAG00000009080)	ENSFCAG00000029320	SHC4 (ENSFCAG00000035557)	SECISBP2L (ENSFCAG00000022355)	COPS2 (ENSFCAG00000023002)	GALK2 (ENSFCAG00000006030)	FGF7 (ENSFCAG00000031568)	FAM227B (ENSFCAG00000025633)	DTWD1 (ENSFCAG00000027604) ##22	ATP8B4 (ENSFCAG00000029598)	SLC27A2 (ENSFCAG00000011025)	HDC (ENSFCAG00000004538)	GABPB1 (ENSFCAG00000025484)	ENSFCAG00000052365	USP8 (ENSFCAG00000025193)	ENSFCAG00000047005	USP50 (ENSFCAG00000008601)	TRPM7 (ENSFCAG00000024588)	SPPL2A (ENSFCAG00000023141)	AP4E1 (ENSFCAG00000010314)	TNFAIP8L3 (ENSFCAG00000032180)	CYP19A1 (ENSFCAG00000023859)	GLDN (ENSFCAG00000010317)	DMXL2 (ENSFCAG00000028210)
Caniformia	ANCESTRAL SPECIES	12	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.B	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Caniformia_b	ANCESTRAL SPECIES	15	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.B	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Ursidae	ANCESTRAL SPECIES	21	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.B	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Ursus	ANCESTRAL SPECIES	73	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.B	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091.g	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
American black bear	MODERN SPECIES	1625															FGF7 (ENSUAMG00000012357)	DTWD1 (ENSUAMG00000012350) ##22
Polar bear	MODERN SPECIES	282	SEMA6D (ENSUMAG00000009435)	SLC24A5 (ENSUMAG00000009735)	MYEF2 (ENSUMAG00000009804)	CTXN2 (ENSUMAG00000010165)	SLC12A1 (ENSUMAG00000010193)	DUT (ENSUMAG00000010375)	FBN1 (ENSUMAG00000010969)	CEP152 (ENSUMAG00000014338)	SHC4 (ENSUMAG00000014355)	ENSUMAG00000014363	SECISBP2L (ENSUMAG00000014412)	COPS2 (ENSUMAG00000014609)	GALK2 (ENSUMAG00000014626)	FAM227B (ENSUMAG00000014646)	FGF7 (ENSUMAG00000014669)	DTWD1 (ENSUMAG00000014673) ##22	ATP8B4 (ENSUMAG00000014687)	SLC27A2 (ENSUMAG00000014731)	HDC (ENSUMAG00000014790)	GABPB1 (ENSUMAG00000014794)	USP8 (ENSUMAG00000014849)	USP50 (ENSUMAG00000015191)	TRPM7 (ENSUMAG00000015380)	SPPL2A (ENSUMAG00000016817)	AP4E1 (ENSUMAG00000017041)	TNFAIP8L3 (ENSUMAG00000017115)	CYP19A1 (ENSUMAG00000017122)	GLDN (ENSUMAG00000017168)	DMXL2 (ENSUMAG00000017518)	SCG3 (ENSUMAG00000019142)	LYSMD2 (ENSUMAG00000019144)
Giant Panda	MODERN SPECIES	15	SEMA6D (ENSAMEG00000002021)	SLC24A5 (ENSAMEG00000002007)	MYEF2 (ENSAMEG00000001964)	CTXN2 (ENSAMEG00000019296)	SLC12A1 (ENSAMEG00000001894)	DUT (ENSAMEG00000001873)	FBN1 (ENSAMEG00000001577)	CEP152 (ENSAMEG00000001549)	ENSAMEG00000019278	SHC4 (ENSAMEG00000001535)	SECISBP2L (ENSAMEG00000001504)	COPS2 (ENSAMEG00000001465)	GALK2 (ENSAMEG00000001434)	FGF7 (ENSAMEG00000001428)	FAM227B (ENSAMEG00000001419)	DTWD1 (ENSAMEG00000001411) ##22	ATP8B4 (ENSAMEG00000016003)	SLC27A2 (ENSAMEG00000008843)	HDC (ENSAMEG00000008883)	GABPB1 (ENSAMEG00000008928)	USP8 (ENSAMEG00000008969)	USP50 (ENSAMEG00000009011)	TRPM7 (ENSAMEG00000009020)	SPPL2A (ENSAMEG00000009085)	AP4E1 (ENSAMEG00000009126)	TNFAIP8L3 (ENSAMEG00000019034)	CYP19A1 (ENSAMEG00000009155)	GLDN (ENSAMEG00000026754)	DMXL2 (ENSAMEG00000009193)	SCG3 (ENSAMEG00000009266)	LYSMD2 (ENSAMEG00000009315)
Mustelinae	ANCESTRAL SPECIES	28	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.B	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
American mink	MODERN SPECIES	171	SEMA6D (ENSNVIG00000018971)	SLC24A5 (ENSNVIG00000019283)	MYEF2 (ENSNVIG00000019330)	CTXN2 (ENSNVIG00000019426)	SLC12A1 (ENSNVIG00000019453)	DUT (ENSNVIG00000019693)	FBN1 (ENSNVIG00000019713)	CEP152 (ENSNVIG00000019841)	SHC4 (ENSNVIG00000020076)	ENSNVIG00000020123	SECISBP2L (ENSNVIG00000020142)	COPS2 (ENSNVIG00000020203)	GALK2 (ENSNVIG00000020240)	FAM227B (ENSNVIG00000020305)	FGF7 (ENSNVIG00000020380)	DTWD1 (ENSNVIG00000020399) ##22	ATP8B4 (ENSNVIG00000020414)	SLC27A2 (ENSNVIG00000020478)	HDC (ENSNVIG00000020520)	GABPB1 (ENSNVIG00000020562)	ENSNVIG00000020625	USP8 (ENSNVIG00000020628)	USP50 (ENSNVIG00000020666)	TRPM7 (ENSNVIG00000020690)	SPPL2A (ENSNVIG00000020800)	AP4E1 (ENSNVIG00000020828)	TNFAIP8L3 (ENSNVIG00000020876)	CYP19A1 (ENSNVIG00000020889)	GLDN (ENSNVIG00000020916)
Ferret	MODERN SPECIES	210															ENSMPUG00000007943	DTWD1 (ENSMPUG00000007939) ##22	ATP8B4 (ENSMPUG00000007926)	SLC27A2 (ENSMPUG00000007916)	HDC (ENSMPUG00000007907)	GABPB1 (ENSMPUG00000007902)	USP8 (ENSMPUG00000007890)	USP50 (ENSMPUG00000007878)	TRPM7 (ENSMPUG00000007861)	AP4E1 (ENSMPUG00000007850)	SPPL2A (ENSMPUG00000007838)	TNFAIP8L3 (ENSMPUG00000018890)	CYP19A1 (ENSMPUG00000007830)	GLDN (ENSMPUG00000007823)	DMXL2 (ENSMPUG00000007804)	SCG3 (ENSMPUG00000007793)	LYSMD2 (ENSMPUG00000007790)
Canidae	ANCESTRAL SPECIES	15	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00940000154268.e.a.hb.a	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Canis_lupus	ANCESTRAL SPECIES	17	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00940000154268.e.a.hb.a	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Dingo	MODERN SPECIES	205	ENSCAFG00020021999	CTXN2 (ENSCAFG00020021998)	SLC12A1 (ENSCAFG00020021951)	DUT (ENSCAFG00020021937)	FBN1 (ENSCAFG00020019590)	ENSCAFG00020019456	CEP152 (ENSCAFG00020019447)	ENSCAFG00020019445	SHC4 (ENSCAFG00020019437)	ENSCAFG00020019427	ENSCAFG00020019424	COPS2 (ENSCAFG00020019420)	GALK2 (ENSCAFG00020019416)	FGF7 (ENSCAFG00020019413)	FAM227B (ENSCAFG00020019412)	DTWD1 (ENSCAFG00020019410) ##22	ATP8B4 (ENSCAFG00020019375)	SLC27A2 (ENSCAFG00020019360)	HDC (ENSCAFG00020019342)	GABPB1 (ENSCAFG00020019337)	USP8 (ENSCAFG00020019330)	USP50 (ENSCAFG00020019320)	TRPM7 (ENSCAFG00020019231)	SPPL2A (ENSCAFG00020019219)	ENSCAFG00020019217	AP4E1 (ENSCAFG00020019190)	TNFAIP8L3 (ENSCAFG00020019185)	CYP19A1 (ENSCAFG00020019162)	GLDN (ENSCAFG00020019134)	DMXL2 (ENSCAFG00020019070)	SCG3 (ENSCAFG00020019040)
Dog	MODERN SPECIES	23	SEMA6D (ENSCAFG00845018164)	SLC24A5 (ENSCAFG00845018687)	MYEF2 (ENSCAFG00845018891)	CTXN2 (ENSCAFG00845019232)	SLC12A1 (ENSCAFG00845019364)	ENSCAFG00845020266	FBN1 (ENSCAFG00845020514)	ENSCAFG00845020766	CEP152 (ENSCAFG00845020950)	SHC4 (ENSCAFG00845021323)	ENSCAFG00845021520	SECISBP2L (ENSCAFG00845021603)	COPS2 (ENSCAFG00845021829)	FGF7 (ENSCAFG00845022021)	FAM227B (ENSCAFG00845022301)	DTWD1 (ENSCAFG00845022680) ##22	ATP8B4 (ENSCAFG00845022807)	SLC27A2 (ENSCAFG00845023230)	HDC (ENSCAFG00845023453)	GABPB1 (ENSCAFG00845023655)	USP8 (ENSCAFG00845023888)	USP50 (ENSCAFG00845023997)	TRPM7 (ENSCAFG00845024080)	SPPL2A (ENSCAFG00845024415)	ENSCAFG00845024711	AP4E1 (ENSCAFG00845024763)	TNFAIP8L3 (ENSCAFG00845024928)	CYP19A1 (ENSCAFG00845024965)	GLDN (ENSCAFG00845025056)	DMXL2 (ENSCAFG00845025245)	SCG3 (ENSCAFG00845025888)
Red fox	MODERN SPECIES	28	SEMA6D (ENSVVUG00000014505)	SLC24A5 (ENSVVUG00000014565)	MYEF2 (ENSVVUG00000014591)	CTXN2 (ENSVVUG00000014689)	SLC12A1 (ENSVVUG00000014691)	DUT (ENSVVUG00000014696)	FBN1 (ENSVVUG00000014737)	CEP152 (ENSVVUG00000016313)	SHC4 (ENSVVUG00000016338)	EID1 (ENSVVUG00000016342)	SECISBP2L (ENSVVUG00000016354)	COPS2 (ENSVVUG00000016395)	GALK2 (ENSVVUG00000016538)	FAM227B (ENSVVUG00000016558)	FGF7 (ENSVVUG00000016575)	DTWD1 (ENSVVUG00000016581) ##22	ATP8B4 (ENSVVUG00000016597)	SLC27A2 (ENSVVUG00000016617)	HDC (ENSVVUG00000016631)	GABPB1 (ENSVVUG00000016725)	USP8 (ENSVVUG00000016731)	USP50 (ENSVVUG00000016749)	TRPM7 (ENSVVUG00000016973)	ENSVVUG00000018693	SPPL2A (ENSVVUG00000018696)	ENSVVUG00000018709	AP4E1 (ENSVVUG00000018715)	TNFAIP8L3 (ENSVVUG00000018736)	CYP19A1 (ENSVVUG00000018740)	ENSVVUG00000018741	ENSVVUG00000018744
Laurasiatheria_c	ANCESTRAL SPECIES	1	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Chiroptera	ANCESTRAL SPECIES	17	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Microchiroptera	ANCESTRAL SPECIES	20	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Greater horseshoe bat	MODERN SPECIES	24	SEMA6D (ENSRFEG00010003213)	SLC24A5 (ENSRFEG00010003102)	ENSRFEG00010003062	CTXN2 (ENSRFEG00010003027)	SLC12A1 (ENSRFEG00010002987)	ENSRFEG00010002932	FBN1 (ENSRFEG00010002836)	CEP152 (ENSRFEG00010002757)	ENSRFEG00010002721	SHC4 (ENSRFEG00010002689)	SECISBP2L (ENSRFEG00010002393)	COPS2 (ENSRFEG00010002164)	GALK2 (ENSRFEG00010002101)	FGF7 (ENSRFEG00010002069)	FAM227B (ENSRFEG00010002010)	DTWD1 (ENSRFEG00010001966) ##22	ENSRFEG00010001948	ENSRFEG00010001939	ATP8B4 (ENSRFEG00010001887)	SLC27A2 (ENSRFEG00010001849)	HDC (ENSRFEG00010001803)	GABPB1 (ENSRFEG00010001734)	USP8 (ENSRFEG00010001670)	USP50 (ENSRFEG00010001620)	TRPM7 (ENSRFEG00010001550)	SPPL2A (ENSRFEG00010001466)	AP4E1 (ENSRFEG00010001391)	TNFAIP8L3 (ENSRFEG00010001350)	CYP19A1 (ENSRFEG00010001310)	GLDN (ENSRFEG00010001263)	DMXL2 (ENSRFEG00010001047)
Microbat	MODERN SPECIES	960	MYEF2 (ENSMLUG00000006781)	CTXN2 (ENSMLUG00000025495)	SLC12A1 (ENSMLUG00000006815)	DUT (ENSMLUG00000006842)	ENSMLUG00000026203	FBN1 (ENSMLUG00000006857)	CEP152 (ENSMLUG00000012896)	EID1 (ENSMLUG00000027610)	SHC4 (ENSMLUG00000012913)	ENSMLUG00000028542	SECISBP2L (ENSMLUG00000012918)	COPS2 (ENSMLUG00000013760)	ENSMLUG00000025580	GALK2 (ENSMLUG00000013767)	FGF7 (ENSMLUG00000010428)	DTWD1 (ENSMLUG00000001784) ##22	ATP8B4 (ENSMLUG00000008270)	SLC27A2 (ENSMLUG00000005760)	HDC (ENSMLUG00000005768)	GABPB1 (ENSMLUG00000005780)	USP8 (ENSMLUG00000000389)	USP50 (ENSMLUG00000006756)	ENSMLUG00000024658	TRPM7 (ENSMLUG00000000187)	SPPL2A (ENSMLUG00000016737)	AP4E1 (ENSMLUG00000009792)	TNFAIP8L3 (ENSMLUG00000009833)	CYP19A1 (ENSMLUG00000009854)	GLDN (ENSMLUG00000009874)	DMXL2 (ENSMLUG00000005617)	SCG3 (ENSMLUG00000003959)
Megabat	MODERN SPECIES	2012												COPS2 (ENSPVAG00000014002)	GALK2 (ENSPVAG00000014005)	FAM227B (ENSPVAG00000014006)	FGF7 (ENSPVAG00000014008)	DTWD1 (ENSPVAG00000014010) ##22	ATP8B4 (ENSPVAG00000014012)	SLC27A2 (ENSPVAG00000014014)	HDC (ENSPVAG00000014015)	GABPB1 (ENSPVAG00000014016)
Equus	ANCESTRAL SPECIES	4	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030.o	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00390000007479.y.a	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488
Horse	MODERN SPECIES		DUT (ENSECAG00000015971)	ENSECAG00000032930	MYEF2 (ENSECAG00000005741)	ENSECAG00000047262	ENSECAG00000040429	ENSECAG00000032606	FBN1 (ENSECAG00000018455)	CEP152 (ENSECAG00000026853)	ENSECAG00000017875	SHC4 (ENSECAG00000015163)	SECISBP2L (ENSECAG00000011253)	COPS2 (ENSECAG00000024709)	GALK2 (ENSECAG00000017631)	FGF7 (ENSECAG00000015510)	FAM227B (ENSECAG00000013743)	DTWD1 (ENSECAG00000012316) ##22	ATP8B4 (ENSECAG00000019617)	SLC27A2 (ENSECAG00000024288)	HDC (ENSECAG00000019282)	GABPB1 (ENSECAG00000016926)	ENSECAG00000039469	USP8 (ENSECAG00000006611)	TRPM7 (ENSECAG00000017780)	SPPL2A (ENSECAG00000008167)	ENSECAG00000031753	AP4E1 (ENSECAG00000022163)	TNFAIP8L3 (ENSECAG00000004768)	CYP19A1 (ENSECAG00000020474)	GLDN (ENSECAG00000019919)	DMXL2 (ENSECAG00000000381)	SCG3 (ENSECAG00000016522)
Donkey	MODERN SPECIES	11	SEMA6D (ENSEASG00005017844)	SLC24A5 (ENSEASG00005017836)	MYEF2 (ENSEASG00005017818)	CTXN2 (ENSEASG00005023826)	SLC12A1 (ENSEASG00005017794)	DUT (ENSEASG00005017779)	FBN1 (ENSEASG00005017178)	CEP152 (ENSEASG00005016832)	ENSEASG00005016810	SHC4 (ENSEASG00005016804)	SECISBP2L (ENSEASG00005016797)	COPS2 (ENSEASG00005016680)	GALK2 (ENSEASG00005016671)	FGF7 (ENSEASG00005016667)	FAM227B (ENSEASG00005037184)	DTWD1 (ENSEASG00005028815) ##22	ATP8B4 (ENSEASG00005016649)	SLC27A2 (ENSEASG00005016639)	HDC (ENSEASG00005016633)	GABPB1 (ENSEASG00005016630)	USP8 (ENSEASG00005016621)	USP50 (ENSEASG00005016618)	TRPM7 (ENSEASG00005014713)	SPPL2A (ENSEASG00005014584)	ENSEASG00005014582	AP4E1 (ENSEASG00005014560)	TNFAIP8L3 (ENSEASG00005033995)	CYP19A1 (ENSEASG00005014547)	GLDN (ENSEASG00005014538)	DMXL2 (ENSEASG00005010302)	SCG3 (ENSEASG00005010013)
Atlantogenata	ANCESTRAL SPECIES	2	ENSGT00390000019406	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875	ENSGT00940000157542	ENSGT00940000160441	ENSGT00940000157091	ENSGT00940000157722	ENSGT00950000182838.C	ENSGT00390000003488.a.a	ENSGT00840000129915	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00390000005488	ENSGT00940000160054
Afrotheria	ANCESTRAL SPECIES	101	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875
Afrotheria_a	ANCESTRAL SPECIES	102	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160101	ENSGT00940000161137	ENSGT00940000157938	ENSGT00940000157875
Elephant	MODERN SPECIES	568	BLOC1S6 (ENSLAFG00000000655)	SQOR (ENSLAFG00000008703)	SEMA6D (ENSLAFG00000006206)	SLC24A5 (ENSLAFG00000021672)	MYEF2 (ENSLAFG00000012990)	CTXN2 (ENSLAFG00000029871)	SLC12A1 (ENSLAFG00000012999)	DUT (ENSLAFG00000004976)	FBN1 (ENSLAFG00000000416)	CEP152 (ENSLAFG00000014279)	SHC4 (ENSLAFG00000008736)	SECISBP2L (ENSLAFG00000006484)	COPS2 (ENSLAFG00000022204)	GALK2 (ENSLAFG00000016919)	FGF7 (ENSLAFG00000009981)	DTWD1 (ENSLAFG00000001810) ##22	ENSLAFG00000007204	ENSLAFG00000027588	ENSLAFG00000031858	SLC27A2 (ENSLAFG00000004735)	HDC (ENSLAFG00000010591)	GABPB1 (ENSLAFG00000001929)
Hyrax	MODERN SPECIES	510																DTWD1 (ENSPCAG00000013943) ##22
Xenarthra	ANCESTRAL SPECIES	699											ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00940000160101
Sloth	MODERN SPECIES	567																DTWD1 (ENSCHOG00000002170) ##22
Armadillo	MODERN SPECIES	2852										ENSDNOG00000041564	SECISBP2L (ENSDNOG00000035508)	COPS2 (ENSDNOG00000034042)	GALK2 (ENSDNOG00000001576)	FGF7 (ENSDNOG00000042712)	ENSDNOG00000001578	DTWD1 (ENSDNOG00000046647) ##22	ATP8B4 (ENSDNOG00000004976)
Platypus	MODERN SPECIES	19	ENSOANG00000047284	CYP19A1 (ENSOANG00000010232)	DMXL2 (ENSOANG00000011034)	ENSOANG00000013111	SLC24A5 (ENSOANG00000050257)	MYEF2 (ENSOANG00000007375)	CTXN2 (ENSOANG00000014863)	SLC12A1 (ENSOANG00000014864)	DUT (ENSOANG00000000332)	FBN1 (ENSOANG00000012937)	ENSOANG00000012940	SECISBP2L (ENSOANG00000040296)	COPS2 (ENSOANG00000010593)	GALK2 (ENSOANG00000022483)	FGF7 (ENSOANG00000047455)	DTWD1 (ENSOANG00000010180) ##22	ATP8B4 (ENSOANG00000013079)
Sauria	ANCESTRAL SPECIES	10	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137
Archelosauria	ANCESTRAL SPECIES	13	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137
Archosauria	ANCESTRAL SPECIES	9	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00990000205468	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137
Aves	ANCESTRAL SPECIES	14	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00990000205468	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613	ENSGT00940000156422
Neognathae	ANCESTRAL SPECIES	11	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613	ENSGT00940000156422	ENSGT00940000158441
Neognathae_b	ANCESTRAL SPECIES	13	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613	ENSGT00940000156422	ENSGT00940000158441
Passeriformes	ANCESTRAL SPECIES	12	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b
Passeriformes_d	ANCESTRAL SPECIES	12	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b
Flycatcher	MODERN SPECIES	1	GLDN (ENSFALG00000022861)	DMXL2 (ENSFALG00000011669)	SEMA6D (ENSFALG00000028246)	SLC24A5 (ENSFALG00000011584)	MYEF2 (ENSFALG00000011565)	CTXN2 (ENSFALG00000014557)	SLC12A1 (ENSFALG00000011549)	DUT (ENSFALG00000011538)	FBN1 (ENSFALG00000011520)	CEP152 (ENSFALG00000011512)	SHC4 (ENSFALG00000011509)	SECISBP2L (ENSFALG00000011503)	COPS2 (ENSFALG00000011497)	GALK2 (ENSFALG00000011494)	FGF7 (ENSFALG00000026559)	DTWD1 (ENSFALG00000025090) ##22	ENSFALG00000027735	SPATA5L1 (ENSFALG00000011487)	C15orf48 (ENSFALG00000011485)	SLC30A4 (ENSFALG00000011480)	BLOC1S6 (ENSFALG00000026626)	SQOR (ENSFALG00000027391)	ENSFALG00000028981	ENSFALG00000027060	SPPL2A (ENSFALG00000011434)	TRPM7 (ENSFALG00000011416)	USP50 (ENSFALG00000026025)	USP8 (ENSFALG00000011392)	GABPB1 (ENSFALG00000011370)	HDC (ENSFALG00000011339)	ENSFALG00000011319
Passeriformes_g	ANCESTRAL SPECIES	13	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b
Passeroidea	ANCESTRAL SPECIES	12	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b
Common canary	MODERN SPECIES	12	GLDN (ENSSCAG00000004900)	DMXL2 (ENSSCAG00000004908)	SEMA6D (ENSSCAG00000004959)	SLC24A5 (ENSSCAG00000005010)	MYEF2 (ENSSCAG00000005037)	CTXN2 (ENSSCAG00000005077)	SLC12A1 (ENSSCAG00000005095)	DUT (ENSSCAG00000005118)	FBN1 (ENSSCAG00000005132)	CEP152 (ENSSCAG00000005164)	SHC4 (ENSSCAG00000005176)	SECISBP2L (ENSSCAG00000005182)	COPS2 (ENSSCAG00000005184)	GALK2 (ENSSCAG00000005191)	FGF7 (ENSSCAG00000005194)	DTWD1 (ENSSCAG00000005200) ##22	SPATA5L1 (ENSSCAG00000005208)	C15orf48 (ENSSCAG00000005211)	SLC30A4 (ENSSCAG00000005215)	BLOC1S6 (ENSSCAG00000005220)	SQOR (ENSSCAG00000005222)	ENSSCAG00000005225	ENSSCAG00000005229	SPPL2A (ENSSCAG00000005244)	TRPM7 (ENSSCAG00000005261)	USP8 (ENSSCAG00000005275)	USP50 (ENSSCAG00000005283)	GABPB1 (ENSSCAG00000005288)	HDC (ENSSCAG00000005290)	GATM (ENSSCAG00000005298)	PDE8A (ENSSCAG00000005304)
Zebra finch	MODERN SPECIES	1	GLDN (ENSTGUG00000006955)	DMXL2 (ENSTGUG00000007026)	SEMA6D (ENSTGUG00000007065)	SLC24A5 (ENSTGUG00000007117)	MYEF2 (ENSTGUG00000007130)	CTXN2 (ENSTGUG00000007161)	SLC12A1 (ENSTGUG00000007163)	DUT (ENSTGUG00000027335)	FBN1 (ENSTGUG00000019967)	CEP152 (ENSTGUG00000007222)	SHC4 (ENSTGUG00000007228)	SECISBP2L (ENSTGUG00000007252)	COPS2 (ENSTGUG00000007288)	GALK2 (ENSTGUG00000007298)	FGF7 (ENSTGUG00000027805)	DTWD1 (ENSTGUG00000007331) ##22	SPATA5L1 (ENSTGUG00000007340)	ENSTGUG00000022847	SLC30A4 (ENSTGUG00000007351)	BLOC1S6 (ENSTGUG00000007369)	SQOR (ENSTGUG00000007375)	ENSTGUG00000007396	ENSTGUG00000025054	SPPL2A (ENSTGUG00000007425)	TRPM7 (ENSTGUG00000007440)	USP8 (ENSTGUG00000007507)	USP50 (ENSTGUG00000007496)	GABPB1 (ENSTGUG00000026845)	HDC (ENSTGUG00000007569)	GATM (ENSTGUG00000007597)	PDE8A (ENSTGUG00000007621)
Medium ground finch	MODERN SPECIES	16	DMXL2 (ENSGFOG00000008859)	SEMA6D (ENSGFOG00000008832)	SLC24A5 (ENSGFOG00000008826)	MYEF2 (ENSGFOG00000008812)	CTXN2 (ENSGFOG00000008805)	ENSGFOG00000008798	ENSGFOG00000008777	DUT (ENSGFOG00000008767)	FBN1 (ENSGFOG00000002999)	CEP152 (ENSGFOG00000002268)	SHC4 (ENSGFOG00000002234)	SECISBP2L (ENSGFOG00000002213)	COPS2 (ENSGFOG00000002121)	GALK2 (ENSGFOG00000002092)	FGF7 (ENSGFOG00000002066)	DTWD1 (ENSGFOG00000002054) ##22	SPATA5L1 (ENSGFOG00000002043)	ENSGFOG00000002035	SLC30A4 (ENSGFOG00000002020)	BLOC1S6 (ENSGFOG00000002011)	SQOR (ENSGFOG00000002001)	ENSGFOG00000001995	ENSGFOG00000001989	SPPL2A (ENSGFOG00000001961)	TRPM7 (ENSGFOG00000001913)	USP50 (ENSGFOG00000001892)	USP8 (ENSGFOG00000001867)	GABPB1 (ENSGFOG00000001861)	HDC (ENSGFOG00000001849)	GATM (ENSGFOG00000001842)	PDE8A (ENSGFOG00000001830)
Great tit	MODERN SPECIES	1	GLDN (ENSPMJG00000018504)	DMXL2 (ENSPMJG00000018505)	SEMA6D (ENSPMJG00000018507)	SLC24A5 (ENSPMJG00000018508)	MYEF2 (ENSPMJG00000018510)	CTXN2 (ENSPMJG00000018513)	SLC12A1 (ENSPMJG00000018514)	DUT (ENSPMJG00000018515)	FBN1 (ENSPMJG00000018539)	CEP152 (ENSPMJG00000019179)	SHC4 (ENSPMJG00000019180)	SECISBP2L (ENSPMJG00000019182)	COPS2 (ENSPMJG00000019183)	GALK2 (ENSPMJG00000019184)	FGF7 (ENSPMJG00000019185)	DTWD1 (ENSPMJG00000019187) ##22	SPATA5L1 (ENSPMJG00000019190)	ENSPMJG00000019191	SLC30A4 (ENSPMJG00000019193)	BLOC1S6 (ENSPMJG00000019194)	SQOR (ENSPMJG00000019195)	ENSPMJG00000019196	SPPL2A (ENSPMJG00000019197)	TRPM7 (ENSPMJG00000019198)	USP50 (ENSPMJG00000019199)	USP8 (ENSPMJG00000000051)	GABPB1 (ENSPMJG00000000237)	HDC (ENSPMJG00000000248)	GATM (ENSPMJG00000000282)	PDE8A (ENSPMJG00000000298)	FSD2 (ENSPMJG00000000348)
Neognathae_c	ANCESTRAL SPECIES	15	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613	ENSGT00940000156422	ENSGT00940000158441
Golden eagle	MODERN SPECIES	21	SEMA6D (ENSACCG00020007229)	ENSACCG00020007319	SLC24A5 (ENSACCG00020007335)	MYEF2 (ENSACCG00020007426)	CTXN2 (ENSACCG00020007530)	SLC12A1 (ENSACCG00020007568)	DUT (ENSACCG00020007637)	FBN1 (ENSACCG00020009486)	ENSACCG00020011088	CEP152 (ENSACCG00020011122)	SHC4 (ENSACCG00020011142)	SECISBP2L (ENSACCG00020011163)	COPS2 (ENSACCG00020011181)	GALK2 (ENSACCG00020011191)	FGF7 (ENSACCG00020011206)	DTWD1 (ENSACCG00020011221) ##22	SPATA5L1 (ENSACCG00020011230)	C15orf48 (ENSACCG00020011244)	SLC30A4 (ENSACCG00020011263)	BLOC1S6 (ENSACCG00020011273)	SQOR (ENSACCG00020011285)	ENSACCG00020011306	ENSACCG00020011322	SPPL2A (ENSACCG00020011358)	TRPM7 (ENSACCG00020011402)	USP50 (ENSACCG00020011427)	USP8 (ENSACCG00020011473)	GABPB1 (ENSACCG00020011533)	HDC (ENSACCG00020011559)	SLC27A2 (ENSACCG00020011594)	GATM (ENSACCG00020011727)
Kakapo	MODERN SPECIES	1	ENSSHBG00005005207	ENSSHBG00005000685	MYEF2 (ENSSHBG00005020824)	CTXN2 (ENSSHBG00005020819)	ENSSHBG00005020813	ENSSHBG00005020804	DUT (ENSSHBG00005020793)	FBN1 (ENSSHBG00005020498)	CEP152 (ENSSHBG00005020315)	ENSSHBG00005020311	ENSSHBG00005020308	SECISBP2L (ENSSHBG00005020305)	COPS2 (ENSSHBG00005020299)	GALK2 (ENSSHBG00005020296)	FGF7 (ENSSHBG00005020294)	DTWD1 (ENSSHBG00005020290) ##22	SPATA5L1 (ENSSHBG00005020287)	C15orf48 (ENSSHBG00005020286)	SLC30A4 (ENSSHBG00005020283)	BLOC1S6 (ENSSHBG00005020282)	SQOR (ENSSHBG00005020281)	NMRK2 (ENSSHBG00005020278)	SPPL2A (ENSSHBG00005020276)	TRPM7 (ENSSHBG00005016879)	USP8 (ENSSHBG00005016425)	GABPB1 (ENSSHBG00005016414)	HDC (ENSSHBG00005016403)	SLC27A2 (ENSSHBG00005016387)	GATM (ENSSHBG00005016379)	ENSSHBG00005016362	ENSSHBG00005016358
Galloanserae	ANCESTRAL SPECIES	10	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Anatidae	ANCESTRAL SPECIES	23	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406
Pink-footed goose	MODERN SPECIES	347										ENSABRG00000019566	SHC4 (ENSABRG00000019557)	SECISBP2L (ENSABRG00000019546)	COPS2 (ENSABRG00000019541)	GALK2 (ENSABRG00000019536)	FGF7 (ENSABRG00000019533)	DTWD1 (ENSABRG00000019526) ##22	SPATA5L1 (ENSABRG00000019516)	C15orf48 (ENSABRG00000019515)	SLC30A4 (ENSABRG00000019511)	BLOC1S6 (ENSABRG00000019506)	SQOR (ENSABRG00000019500)	ENSABRG00000019492
Duck	MODERN SPECIES	2	GLDN (ENSAPLG00000008175)	DMXL2 (ENSAPLG00000008330)	SEMA6D (ENSAPLG00000009360)	SLC24A5 (ENSAPLG00000009353)	MYEF2 (ENSAPLG00000008935)	CTXN2 (ENSAPLG00000023654)	SLC12A1 (ENSAPLG00000007672)	DUT (ENSAPLG00000007662)	FBN1 (ENSAPLG00000005565)	CEP152 (ENSAPLG00000005273)	SHC4 (ENSAPLG00000004896)	SECISBP2L (ENSAPLG00000004694)	COPS2 (ENSAPLG00000004440)	GALK2 (ENSAPLG00000004342)	FGF7 (ENSAPLG00000004328)	DTWD1 (ENSAPLG00000004237) ##22	SPATA5L1 (ENSAPLG00000004210)	C15orf48 (ENSAPLG00000017258)	SLC30A4 (ENSAPLG00000004133)	BLOC1S6 (ENSAPLG00000004081)	SQOR (ENSAPLG00000003727)	AP4E1 (ENSAPLG00000003399)	SCG3 (ENSAPLG00000003099)	LYSMD2 (ENSAPLG00000003096)	TMOD2 (ENSAPLG00000008311)	TMOD3 (ENSAPLG00000009038)	LEO1 (ENSAPLG00000009700)	MAPK6 (ENSAPLG00000005030)	GNB5 (ENSAPLG00000004949)	MYO5C (ENSAPLG00000023919)	MYO5A (ENSAPLG00000003054)
Phasianidae	ANCESTRAL SPECIES	11	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b.g	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Phasianidae_b	ANCESTRAL SPECIES	11	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b.g	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Chicken	MODERN SPECIES	1	SEMA6D (ENSGALG00010022698)	SLC24A5 (ENSGALG00010018219)	MYEF2 (ENSGALG00010018313)	CTXN2 (ENSGALG00010018347)	SLC12A1 (ENSGALG00010018390)	DUT (ENSGALG00010018416)	FBN1 (ENSGALG00010018446)	ENSGALG00010018493	ENSGALG00010020940	SHC4 (ENSGALG00010020132)	SECISBP2L (ENSGALG00010020140)	COPS2 (ENSGALG00010016027)	GALK2 (ENSGALG00010016069)	FGF7 (ENSGALG00010016094)	FAM227B (ENSGALG00010016101)	DTWD1 (ENSGALG00010016113) ##22	SPATA5L1 (ENSGALG00010016122)	C10H15ORF48 (ENSGALG00010016930)	SLC30A4 (ENSGALG00010016931)	SQRDL (ENSGALG00010016962)	BLOC1S6 (ENSGALG00010017070)	ITGB1BP3 (ENSGALG00010017109)	ENSGALG00010017135	SPPL2A (ENSGALG00010017221)	TRPM7 (ENSGALG00010017300)	USP8 (ENSGALG00010017377)	GABPB1 (ENSGALG00010017451)	HDC (ENSGALG00010017510)	GATM (ENSGALG00010017604)	PDE8A (ENSGALG00010020912)	FSD2 (ENSGALG00010017656)
Turkey	MODERN SPECIES	3	DMXL2 (ENSMGAG00000006618)	SEMA6D (ENSMGAG00000006680)	SLC24A5 (ENSMGAG00000006903)	MYEF2 (ENSMGAG00000006915)	CTXN2 (ENSMGAG00000021190)	ENSMGAG00000018690	ENSMGAG00000006751	DUT (ENSMGAG00000006960)	FBN1 (ENSMGAG00000006969)	CEP152 (ENSMGAG00000007112)	SHC4 (ENSMGAG00000007143)	SECISBP2L (ENSMGAG00000007165)	COPS2 (ENSMGAG00000007200)	GALK2 (ENSMGAG00000007213)	FGF7 (ENSMGAG00000007239)	DTWD1 (ENSMGAG00000007251) ##22	C15orf48 (ENSMGAG00000007267)	SLC30A4 (ENSMGAG00000007274)	BLOC1S6 (ENSMGAG00000007293)	SQOR (ENSMGAG00000007296)	ENSMGAG00000007552	ENSMGAG00000007325	SPPL2A (ENSMGAG00000007335)	TRPM7 (ENSMGAG00000007383)	USP8 (ENSMGAG00000007448)	GABPB1 (ENSMGAG00000007495)	HDC (ENSMGAG00000007531)	ENSMGAG00000007592	FSD2 (ENSMGAG00000007666)	HOMER2 (ENSMGAG00000007704)	ENSMGAG00000016131
Japanese quail	MODERN SPECIES	1	GLDN (ENSCJPG00005018631)	DMXL2 (ENSCJPG00005018633)	SEMA6D (ENSCJPG00005019571)	SLC24A5 (ENSCJPG00005019658)	MYEF2 (ENSCJPG00005019659)	CTXN2 (ENSCJPG00005019662)	SLC12A1 (ENSCJPG00005019687)	DUT (ENSCJPG00005019817)	FBN1 (ENSCJPG00005019818)	ENSCJPG00005019954	SHC4 (ENSCJPG00005019955)	SECISBP2L (ENSCJPG00005019956)	COPS2 (ENSCJPG00005020044)	GALK2 (ENSCJPG00005020066)	FGF7 (ENSCJPG00005020071)	DTWD1 (ENSCJPG00005020072) ##22	SPATA5L1 (ENSCJPG00005020074)	C15orf48 (ENSCJPG00005020076)	SLC30A4 (ENSCJPG00005020078)	BLOC1S6 (ENSCJPG00005020079)	SQOR (ENSCJPG00005020080)	ENSCJPG00005020089	ENSCJPG00005020090	SPPL2A (ENSCJPG00005020091)	TRPM7 (ENSCJPG00005020093)	USP8 (ENSCJPG00005020198)	GABPB1 (ENSCJPG00005020200)	HDC (ENSCJPG00005020202)	GATM (ENSCJPG00005020207)	PDE8A (ENSCJPG00005020208)	FSD2 (ENSCJPG00005020212)
African ostrich	MODERN SPECIES	834	DMXL2 (ENSSCUG00000014298)	SEMA6D (ENSSCUG00000014268)	SLC24A5 (ENSSCUG00000014631)	MYEF2 (ENSSCUG00000014614)	CTXN2 (ENSSCUG00000014605)	SLC12A1 (ENSSCUG00000014368)	DUT (ENSSCUG00000014307)	FBN1 (ENSSCUG00000014303)	CEP152 (ENSSCUG00000014297)	SHC4 (ENSSCUG00000014290)	SECISBP2L (ENSSCUG00000014279)	COPS2 (ENSSCUG00000014274)	GALK2 (ENSSCUG00000014272)	FGF7 (ENSSCUG00000014270)	ENSSCUG00000014267	DTWD1 (ENSSCUG00000014264) ##22	SPATA5L1 (ENSSCUG00000014260)	SLC30A4 (ENSSCUG00000014256)	BLOC1S6 (ENSSCUG00000014252)	SQOR (ENSSCUG00000014248)	ENSSCUG00000014242	ENSSCUG00000014239	SPPL2A (ENSSCUG00000014216)	TRPM7 (ENSSCUG00000014197)	USP50 (ENSSCUG00000014190)	USP8 (ENSSCUG00000014181)	ENSSCUG00000014179	GABPB1 (ENSSCUG00000014173)	HDC (ENSSCUG00000014170)	SLC27A2 (ENSSCUG00000014162)	GATM (ENSSCUG00000014155)
Australian saltwater crocodile	MODERN SPECIES	31	DMXL2 (ENSCPRG00005013962)	ENSCPRG00005013970	SEMA6D (ENSCPRG00005013979)	SLC24A5 (ENSCPRG00005014017)	MYEF2 (ENSCPRG00005014026)	CTXN2 (ENSCPRG00005014036)	SLC12A1 (ENSCPRG00005014046)	DUT (ENSCPRG00005014065)	FBN1 (ENSCPRG00005014181)	CEP152 (ENSCPRG00005014611)	SHC4 (ENSCPRG00005014633)	SECISBP2L (ENSCPRG00005014638)	COPS2 (ENSCPRG00005014642)	GALK2 (ENSCPRG00005014647)	FGF7 (ENSCPRG00005014649)	DTWD1 (ENSCPRG00005014654) ##22	ENSCPRG00005014657	ATP8B4 (ENSCPRG00005014680)	SPATA5L1 (ENSCPRG00005014904)	C15orf48 (ENSCPRG00005014908)	SLC30A4 (ENSCPRG00005014914)	BLOC1S6 (ENSCPRG00005014919)	SQOR (ENSCPRG00005014924)	ENSCPRG00005014929	SPPL2A (ENSCPRG00005014945)	TRPM7 (ENSCPRG00005015267)	USP50 (ENSCPRG00005016060)	USP8 (ENSCPRG00005016079)	GABPB1 (ENSCPRG00005016149)	HDC (ENSCPRG00005016158)	SLC27A2 (ENSCPRG00005016163)
Cryptodira	ANCESTRAL SPECIES	13	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000172921	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137
Testudinoidea	ANCESTRAL SPECIES	6	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613
Emydidae	ANCESTRAL SPECIES	21	ENSGT00940000156920.h	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390.uc	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613
Three-toed box turtle	MODERN SPECIES	27	DMXL2 (ENSTMTG00000023058)	ENSTMTG00000000056	SEMA6D (ENSTMTG00000000429)	SLC24A5 (ENSTMTG00000000954)	MYEF2 (ENSTMTG00000001001)	CTXN2 (ENSTMTG00000001112)	SLC12A1 (ENSTMTG00000001166)	DUT (ENSTMTG00000001292)	FBN1 (ENSTMTG00000002334)	CEP152 (ENSTMTG00000016761)	SHC4 (ENSTMTG00000016835)	SECISBP2L (ENSTMTG00000016939)	COPS2 (ENSTMTG00000017066)	GALK2 (ENSTMTG00000017101)	FGF7 (ENSTMTG00000017113)	DTWD1 (ENSTMTG00000017128) ##22	ENSTMTG00000017138	ENSTMTG00000017188	ENSTMTG00000017200	SPATA5L1 (ENSTMTG00000017254)	C15orf48 (ENSTMTG00000017267)	SLC30A4 (ENSTMTG00000017282)	BLOC1S6 (ENSTMTG00000017326)	SQOR (ENSTMTG00000017342)	ENSTMTG00000017360	SPPL2A (ENSTMTG00000017391)	TRPM7 (ENSTMTG00000017546)	USP50 (ENSTMTG00000018550)	USP8 (ENSTMTG00000018583)	GABPB1 (ENSTMTG00000018609)	HDC (ENSTMTG00000018634)
painted turtle	MODERN SPECIES	13	ENSCPBG00000024917	SEMA6D (ENSCPBG00000024906)	SLC24A5 (ENSCPBG00000024902)	MYEF2 (ENSCPBG00000024789)	CTXN2 (ENSCPBG00000024781)	SLC12A1 (ENSCPBG00000024778)	DUT (ENSCPBG00000024775)	FBN1 (ENSCPBG00000024763)	CEP152 (ENSCPBG00000024756)	SHC4 (ENSCPBG00000024752)	SECISBP2L (ENSCPBG00000024750)	COPS2 (ENSCPBG00000024749)	GALK2 (ENSCPBG00000024748)	FGF7 (ENSCPBG00000024746)	FAM227B (ENSCPBG00000024745)	DTWD1 (ENSCPBG00000024744) ##22	ENSCPBG00000024741	ENSCPBG00000024739	SRP14 (ENSCPBG00000024737)	EIF2AK4 (ENSCPBG00000024736)	GPR176 (ENSCPBG00000024733)	FSIP1 (ENSCPBG00000024729)	THBS1 (ENSCPBG00000024724)	KATNBL1 (ENSCPBG00000024720)	EMC7 (ENSCPBG00000024718)	CHRM5 (ENSCPBG00000024717)	AVEN (ENSCPBG00000024716)	RYR3 (ENSCPBG00000023284)	ENSCPBG00000022955	DAZAP1 (ENSCPBG00000022951)	GAMT (ENSCPBG00000022946)
Testudinidae	ANCESTRAL SPECIES	3	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613
Goode s thornscrub tortoise	MODERN SPECIES	1	DMXL2 (ENSGEVG00005020476)	SEMA6D (ENSGEVG00005020439)	SLC24A5 (ENSGEVG00005020424)	MYEF2 (ENSGEVG00005020415)	CTXN2 (ENSGEVG00005020409)	SLC12A1 (ENSGEVG00005020391)	DUT (ENSGEVG00005020371)	FBN1 (ENSGEVG00005020347)	ENSGEVG00005020334	CEP152 (ENSGEVG00005020310)	SHC4 (ENSGEVG00005020292)	SECISBP2L (ENSGEVG00005020282)	COPS2 (ENSGEVG00005020273)	GALK2 (ENSGEVG00005020264)	FGF7 (ENSGEVG00005020260)	DTWD1 (ENSGEVG00005020257) ##22	ENSGEVG00005020245	ATP8B4 (ENSGEVG00005019992)	SPATA5L1 (ENSGEVG00005019817)	ENSGEVG00005019809	SLC30A4 (ENSGEVG00005019801)	BLOC1S6 (ENSGEVG00005019795)	SQOR (ENSGEVG00005019788)	ENSGEVG00005019778	ENSGEVG00005019773	ENSGEVG00005019765	ENSGEVG00005019759	TRPM7 (ENSGEVG00005012812)	USP50 (ENSGEVG00005011334)	USP8 (ENSGEVG00005011194)	GABPB1 (ENSGEVG00005011119)
Abingdon island giant tortoise	MODERN SPECIES	190			SEMA6D (ENSCABG00000019708)	SLC24A5 (ENSCABG00000019711)	MYEF2 (ENSCABG00000019712)	CTXN2 (ENSCABG00000019741)	SLC12A1 (ENSCABG00000019743)	DUT (ENSCABG00000019748)	FBN1 (ENSCABG00000019754)	CEP152 (ENSCABG00000019757)	SHC4 (ENSCABG00000019761)	SECISBP2L (ENSCABG00000019768)	COPS2 (ENSCABG00000019848)	GALK2 (ENSCABG00000020073)	FGF7 (ENSCABG00000020076)	DTWD1 (ENSCABG00000020077) ##22	ENSCABG00000020079
Chinese turtle	MODERN SPECIES	2027	CYP19A1 (ENSPSIG00000017785)	GLDN (ENSPSIG00000017709)	ENSPSIG00000000767	SEMA6D (ENSPSIG00000017665)	SLC24A5 (ENSPSIG00000017429)	MYEF2 (ENSPSIG00000016637)	SLC12A1 (ENSPSIG00000015396)	DUT (ENSPSIG00000015285)	FBN1 (ENSPSIG00000013146)	CEP152 (ENSPSIG00000011993)	SHC4 (ENSPSIG00000011633)	SECISBP2L (ENSPSIG00000011270)	COPS2 (ENSPSIG00000010252)	GALK2 (ENSPSIG00000009230)	FGF7 (ENSPSIG00000009064)	DTWD1 (ENSPSIG00000008751) ##22	ENSPSIG00000008100	ATP8B4 (ENSPSIG00000006738)	SPATA5L1 (ENSPSIG00000006702)	ENSPSIG00000012547	SLC30A4 (ENSPSIG00000011559)	BLOC1S6 (ENSPSIG00000011347)	SQOR (ENSPSIG00000010261)	ENSPSIG00000009040	SPPL2A (ENSPSIG00000008469)	ENSPSIG00000007563
Lepidosauria	ANCESTRAL SPECIES	19	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101.w	ENSGT00940000160101.x	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938
Episquamata	ANCESTRAL SPECIES	9	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137
Laterata	ANCESTRAL SPECIES	16	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613
Argentine black and white tegu	MODERN SPECIES	46	GLDN (ENSSMRG00000022342)	DMXL2 (ENSSMRG00000022343)	SEMA6D (ENSSMRG00000022344)	SLC24A5 (ENSSMRG00000022346)	MYEF2 (ENSSMRG00000022347)	CTXN2 (ENSSMRG00000022348)	SLC12A1 (ENSSMRG00000022349)	DUT (ENSSMRG00000022350)	FBN1 (ENSSMRG00000022351)	CEP152 (ENSSMRG00000022352)	SHC4 (ENSSMRG00000022353)	SECISBP2L (ENSSMRG00000022354)	COPS2 (ENSSMRG00000022356)	GALK2 (ENSSMRG00000022357)	FGF7 (ENSSMRG00000022359)	DTWD1 (ENSSMRG00000022361) ##22	ENSSMRG00000022362	SPATA5L1 (ENSSMRG00000022363)	SLC30A4 (ENSSMRG00000022365)	BLOC1S6 (ENSSMRG00000022367)	SQOR (ENSSMRG00000022368)	ENSSMRG00000022369	SPPL2A (ENSSMRG00000022370)	TRPM7 (ENSSMRG00000022371)	USP50 (ENSSMRG00000022372)	USP8 (ENSSMRG00000022373)	ENSSMRG00000022374	GABPB1 (ENSSMRG00000022375)	HDC (ENSSMRG00000022376)	SLC27A2 (ENSSMRG00000022377)	GATM (ENSSMRG00000022378)
Common wall lizard	MODERN SPECIES	5	SLC24A5 (ENSPMRG00000023039)	ENSPMRG00000023042	CTXN2 (ENSPMRG00000023043)	SLC12A1 (ENSPMRG00000023307)	DUT (ENSPMRG00000023608)	FBN1 (ENSPMRG00000023763)	CEP152 (ENSPMRG00000023833)	ENSPMRG00000023837	ENSPMRG00000023838	ENSPMRG00000023843	SECISBP2L (ENSPMRG00000023845)	ENSPMRG00000023847	COPS2 (ENSPMRG00000023853)	GALK2 (ENSPMRG00000023857)	FGF7 (ENSPMRG00000023858)	DTWD1 (ENSPMRG00000016336) ##22	ENSPMRG00000016338	ENSPMRG00000016350	ENSPMRG00000016356	SPATA5L1 (ENSPMRG00000016369)	ENSPMRG00000016374	SLC30A4 (ENSPMRG00000016379)	BLOC1S6 (ENSPMRG00000016383)	SQOR (ENSPMRG00000016388)	ENSPMRG00000016394	SPPL2A (ENSPMRG00000016403)	TRPM7 (ENSPMRG00000016586)	USP50 (ENSPMRG00000017719)	USP8 (ENSPMRG00000017790)	GABPB1 (ENSPMRG00000017997)	HDC (ENSPMRG00000018009)
Toxicofera	ANCESTRAL SPECIES	15	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613
Elapidae	ANCESTRAL SPECIES	12	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000162699	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159842.ac.a	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613.a.a
Elapidae_a	ANCESTRAL SPECIES	17	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a.c	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159842.ac.a	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613.a.a
Acanthophiinae	ANCESTRAL SPECIES	17	ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a.c	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159842.ac.a	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613.a.a
Eastern brown snake	MODERN SPECIES	44	GLDN (ENSPTXG00000011825)	DMXL2 (ENSPTXG00000011822)	SEMA6D (ENSPTXG00000011819)	SLC24A5 (ENSPTXG00000011818)	MYEF2 (ENSPTXG00000011816)	CTXN2 (ENSPTXG00000011815)	SLC12A1 (ENSPTXG00000011813)	DUT (ENSPTXG00000011812)	FBN1 (ENSPTXG00000008591)	ENSPTXG00000008550	SHC4 (ENSPTXG00000008549)	SECISBP2L (ENSPTXG00000008390)	COPS2 (ENSPTXG00000008385)	GALK2 (ENSPTXG00000008384)	FGF7 (ENSPTXG00000008382)	DTWD1 (ENSPTXG00000008381) ##22	ENSPTXG00000008379	SPATA5L1 (ENSPTXG00000008376)	C15orf48 (ENSPTXG00000005750)	SLC30A4 (ENSPTXG00000005749)	BLOC1S6 (ENSPTXG00000005748)	SQOR (ENSPTXG00000005747)	ENSPTXG00000005746	ENSPTXG00000005745	SPPL2A (ENSPTXG00000005744)	TRPM7 (ENSPTXG00000005743)	USP50 (ENSPTXG00000005742)	USP8 (ENSPTXG00000005741)	GABPB1 (ENSPTXG00000005739)	HDC (ENSPTXG00000005707)	SLC27A2 (ENSPTXG00000005706)
Mainland tiger snake	MODERN SPECIES	88	DMXL2 (ENSNSUG00000019592)	ENSNSUG00000019591	SEMA6D (ENSNSUG00000019590)	SLC24A5 (ENSNSUG00000019589)	MYEF2 (ENSNSUG00000019588)	CTXN2 (ENSNSUG00000019587)	SLC12A1 (ENSNSUG00000019586)	DUT (ENSNSUG00000019574)	FBN1 (ENSNSUG00000019501)	ENSNSUG00000019479	SHC4 (ENSNSUG00000019478)	SECISBP2L (ENSNSUG00000019477)	COPS2 (ENSNSUG00000019476)	GALK2 (ENSNSUG00000019475)	FGF7 (ENSNSUG00000019474)	DTWD1 (ENSNSUG00000019473) ##22	ENSNSUG00000019472	ENSNSUG00000019471	ENSNSUG00000019469	C15orf48 (ENSNSUG00000019467)	SLC30A4 (ENSNSUG00000019449)	BLOC1S6 (ENSNSUG00000019448)	ENSNSUG00000019447	SQOR (ENSNSUG00000019446)	ENSNSUG00000019445	ENSNSUG00000019444	SPPL2A (ENSNSUG00000019443)	TRPM7 (ENSNSUG00000019442)	USP50 (ENSNSUG00000019441)	USP8 (ENSNSUG00000019440)	GABPB1 (ENSNSUG00000019439)
Blue-lipped sea krait	MODERN SPECIES	5207															FGF7 (ENSLLTG00000013967)	DTWD1 (ENSLLTG00000013964) ##22	ENSLLTG00000013958
Indian cobra	MODERN SPECIES	14	DMXL2 (ENSNNAG00000018652)	SEMA6D (ENSNNAG00000018674)	SLC24A5 (ENSNNAG00000018679)	MYEF2 (ENSNNAG00000018686)	CTXN2 (ENSNNAG00000018692)	SLC12A1 (ENSNNAG00000018702)	DUT (ENSNNAG00000018740)	FBN1 (ENSNNAG00000018850)	CEP152 (ENSNNAG00000019043)	SHC4 (ENSNNAG00000019047)	SECISBP2L (ENSNNAG00000019049)	COPS2 (ENSNNAG00000019053)	GALK2 (ENSNNAG00000019057)	ENSNNAG00000019062	FGF7 (ENSNNAG00000019070)	DTWD1 (ENSNNAG00000019075) ##22	ENSNNAG00000019103	SPATA5L1 (ENSNNAG00000019114)	C15orf48 (ENSNNAG00000019116)	SLC30A4 (ENSNNAG00000019118)	BLOC1S6 (ENSNNAG00000019120)	SQOR (ENSNNAG00000019122)	ENSNNAG00000019125	ENSNNAG00000019126	ENSNNAG00000019128	TRPM7 (ENSNNAG00000019137)	USP50 (ENSNNAG00000019144)	USP8 (ENSNNAG00000019145)	GABPB1 (ENSNNAG00000019146)	HDC (ENSNNAG00000019147)	SLC27A2 (ENSNNAG00000003825)
Lizard	MODERN SPECIES	1118								ENSACAG00000005920	ENSACAG00000005944	ENSACAG00000045557	SECISBP2L (ENSACAG00000006021)	COPS2 (ENSACAG00000015992)	GALK2 (ENSACAG00000015916)	FGF7 (ENSACAG00000015899)	FAM227B (ENSACAG00000029305)	DTWD1 (ENSACAG00000041830) ##22	ENSACAG00000015749	ENSACAG00000015727	C15orf48 (ENSACAG00000035604)	SLC30A4 (ENSACAG00000015702)
tuatara	MODERN SPECIES	126	SLC24A5 (ENSSPUG00000012031)	MYEF2 (ENSSPUG00000011966)	CTXN2 (ENSSPUG00000011949)	SLC12A1 (ENSSPUG00000011911)	DUT (ENSSPUG00000011878)	FBN1 (ENSSPUG00000011609)	ENSSPUG00000011558	ENSSPUG00000011552	ENSSPUG00000011543	ENSSPUG00000011540	SHC4 (ENSSPUG00000011515)	SECISBP2L (ENSSPUG00000011486)	COPS2 (ENSSPUG00000011462)	GALK2 (ENSSPUG00000011446)	FGF7 (ENSSPUG00000011440)	DTWD1 (ENSSPUG00000011432) ##22	ENSSPUG00000011407	ENSSPUG00000011395	ATP8B4 (ENSSPUG00000011354)	C15orf48 (ENSSPUG00000011293)	SLC30A4 (ENSSPUG00000011286)	BLOC1S6 (ENSSPUG00000011274)	SQOR (ENSSPUG00000011244)	ENSSPUG00000011228	SPPL2A (ENSSPUG00000011146)	TRPM7 (ENSSPUG00000010871)	USP50 (ENSSPUG00000010816)	USP8 (ENSSPUG00000010804)	GABPB1 (ENSSPUG00000010792)	HDC (ENSSPUG00000010770)	SLC27A2 (ENSSPUG00000010748)
Anura	ANCESTRAL SPECIES		ENSGT00940000158020	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000162699	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159842	ENSGT00940000158245	ENSGT00940000157722	ENSGT00940000157091.a	ENSGT00940000157091.b	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137
Frog	MODERN SPECIES	3	ENSXETG00000043223	sema6d (ENSXETG00000018391)	ENSXETG00000048661	slc24a5 (ENSXETG00000018406)	myef2 (ENSXETG00000018412)	slc12a1 (ENSXETG00000008777)	dut (ENSXETG00000036738)	fbn1 (ENSXETG00000008779)	cep152 (ENSXETG00000008781)	shc4 (ENSXETG00000008782)	secisbp2l (ENSXETG00000008783)	cops2 (ENSXETG00000008784)	galk2 (ENSXETG00000008785)	fam227b (ENSXETG00000039037)	fgf7 (ENSXETG00000037937)	dtwd1 (ENSXETG00000008787) ##22	ENSXETG00000008788	atp8b4 (ENSXETG00000008789)	spata5l1 (ENSXETG00000038441)	slc30a4 (ENSXETG00000022040)	bloc1s6 (ENSXETG00000022045)	sqor (ENSXETG00000022046)	nmrk2 (ENSXETG00000022049)	ENSXETG00000034852	cdc42se2 (ENSXETG00000022051)	sppl2a (ENSXETG00000022052)	trpm7 (ENSXETG00000022057)	ENSXETG00000047653	XB5892783 [provisional:trpm7] (ENSXETG00000035125)	usp8 (ENSXETG00000016117)	gabpb1 (ENSXETG00000016116)
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000020715	ENSLLEG00000020851	CEP152 (ENSLLEG00000020898)	ENSLLEG00000021107	SHC4 (ENSLLEG00000021167)	ENSLLEG00000021265	ENSLLEG00000021288	SECISBP2L (ENSLLEG00000021352)	COPS2 (ENSLLEG00000021678)	GALK2 (ENSLLEG00000022649)	ENSLLEG00000022863	ENSLLEG00000022884	FGF7 (ENSLLEG00000022906)	ENSLLEG00000022967	ENSLLEG00000023054	DTWD1 (ENSLLEG00000006336) ##22	ATP8B4 (ENSLLEG00000006390)	SPATA5L1 (ENSLLEG00000006518)	SLC30A4 (ENSLLEG00000006585)	BLOC1S6 (ENSLLEG00000006722)	SQOR (ENSLLEG00000006754)	ENSLLEG00000006841	ENSLLEG00000006966	ENSLLEG00000006994	SPPL2A (ENSLLEG00000007069)	ENSLLEG00000007316	ENSLLEG00000007438	ENSLLEG00000008295	ENSLLEG00000009019	USP8 (ENSLLEG00000009062)	ENSLLEG00000009344
Coelacanth	MODERN SPECIES	664				SEMA6D (ENSLACG00000004006)	SLC24A5 (ENSLACG00000005990)	MYEF2 (ENSLACG00000006382)	SLC12A1 (ENSLACG00000007198)	FBN1 (ENSLACG00000008937)	CEP152 (ENSLACG00000011519)	SHC4 (ENSLACG00000012121)	SECISBP2L (ENSLACG00000012542)	COPS2 (ENSLACG00000012934)	GALK2 (ENSLACG00000013148)	ENSLACG00000022514	FGF7 (ENSLACG00000014240)	DTWD1 (ENSLACG00000014657) ##22	ENSLACG00000014716	ATP8B4 (ENSLACG00000014996)	SPATA5L1 (ENSLACG00000015448)	C15orf48 (ENSLACG00000022129)	SLC30A4 (ENSLACG00000015653)
Actinopterygii	ANCESTRAL SPECIES	18	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b.a	ENSGT00950000182870.b.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000169841	ENSGT00990000205468	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000157722	ENSGT00940000157091	ENSGT00390000010440	ENSGT00940000177451	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938
Neopterygii	ANCESTRAL SPECIES	11	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b.a	ENSGT00950000182870.b.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000169841	ENSGT00990000205468	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b
Osteoglossocephalai	ANCESTRAL SPECIES	10	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f	ENSGT00950000182870.b.a	ENSGT00950000182870.b.b	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000169841	ENSGT00990000205468	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00390000019406	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b
Osteoglossiformes	ANCESTRAL SPECIES	13															ENSGT00940000159843.a	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160101.a	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545.b	ENSGT00940000159842.wc	ENSGT00940000157091.i	ENSGT00940000157542	ENSGT00940000157875.a	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613	ENSGT00940000156422.a	ENSGT00510000047412.b
Asian bonytongue	MODERN SPECIES	2	scg3 (ENSSFOG00015028610)	tnfaip8l3 (ENSSFOG00015012675)	GLDN (ENSSFOG00015012685)	dmxl2 (ENSSFOG00015012718)	sema6dl (ENSSFOG00015012822)	slc24a5 (ENSSFOG00015012925)	myef2 (ENSSFOG00015012981)	CTXN2 (ENSSFOG00015013017)	SLC12A1 (ENSSFOG00015013047)	DUT (ENSSFOG00015013125)	FBN1 (ENSSFOG00015013164)	SHC4 (ENSSFOG00015013320)	SECISBP2L (ENSSFOG00015013377)	cops2 (ENSSFOG00015013490)	FGF7 (ENSSFOG00015013548)	dtwd1 (ENSSFOG00015013665) ##22	ENSSFOG00015013602	ATP8B4 (ENSSFOG00015013706)	spata5l1 (ENSSFOG00015013907)	ENSSFOG00015029255	slc30a4 (ENSSFOG00015013936)	NMRK2 (ENSSFOG00015013954)	ENSSFOG00015013971	trpm7 (ENSSFOG00015014022)	USP8 (ENSSFOG00015014211)	gabpb1 (ENSSFOG00015014308)	hdc (ENSSFOG00015014342)	slc27a2a (ENSSFOG00015014467)	SLC27A2 (ENSSFOG00015015329)	gatm (ENSSFOG00015015354)	pde8a (ENSSFOG00015015418)
P. kingsleyae	MODERN SPECIES	14	GLDN (ENSPKIG00000021158)	dmxl2 (ENSPKIG00000020969)	sema6dl (ENSPKIG00000020763)	slc24a5 (ENSPKIG00000020692)	ENSPKIG00000020670	myef2 (ENSPKIG00000020643)	CTXN2 (ENSPKIG00000020625)	SLC12A1 (ENSPKIG00000020510)	DUT (ENSPKIG00000020461)	FBN1 (ENSPKIG00000020341)	ENSPKIG00000020291	ENSPKIG00000020284	SECISBP2L (ENSPKIG00000020244)	cops2 (ENSPKIG00000020180)	FGF7 (ENSPKIG00000020156)	dtwd1 (ENSPKIG00000020145) ##22	ENSPKIG00000020109	ATP8B4 (ENSPKIG00000020020)	spata5l1 (ENSPKIG00000019971)	zgc:153317 (ENSPKIG00000019958)	slc30a4 (ENSPKIG00000019931)	NMRK2 (ENSPKIG00000019908)	ENSPKIG00000019883	trpm7 (ENSPKIG00000019818)	USP8 (ENSPKIG00000019742)	gabpb1 (ENSPKIG00000019705)	ENSPKIG00000019693	hdc (ENSPKIG00000019642)	ENSPKIG00000019612	ENSPKIG00000019594	gatm (ENSPKIG00000019560)
Clupeocephala	ANCESTRAL SPECIES	55													ENSGT00940000159843	ENSGT00940000169841	ENSGT00990000205468	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613
Otomorpha	ANCESTRAL SPECIES	47	ENSGT00390000005488	ENSGT00390000003488.a.a	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613
Otophysi	ANCESTRAL SPECIES	76	ENSGT00390000005488	ENSGT00940000157652	ENSGT00390000003488.a.a	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b.t	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00490000043356.a	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000157947.a.b	ENSGT00390000011613	ENSGT00940000156422
Characiphysae	ANCESTRAL SPECIES	125	ENSGT00550000074952	ENSGT00940000158280	ENSGT00940000160054	ENSGT00390000005488	ENSGT00940000157652	ENSGT00390000003488.a.a	ENSGT00940000159303	ENSGT01030000234532.A.b.t	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00490000043356.a	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938.s	ENSGT00940000164068.a.b.b	ENSGT00940000157947.a.b	ENSGT00390000011613	ENSGT00940000156422
Characiphysae_b	ANCESTRAL SPECIES	128	ENSGT00390000005488	ENSGT00940000157652	ENSGT00390000003488.a.a	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b.t	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00490000043356.a	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938.s	ENSGT00940000164068.a.b.b	ENSGT00940000157947.a.b	ENSGT00390000011613	ENSGT00940000156422
Characoidei	ANCESTRAL SPECIES	159	ENSGT00390000005488	ENSGT00940000157652	ENSGT00390000003488.a.a	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b.t	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00490000043356.a	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938.s	ENSGT00940000164068.a.b.b
Red-bellied piranha	MODERN SPECIES	985																dtwd1 (ENSPNAG00000027463) ##22	ENSPNAG00000004238	spata5l1 (ENSPNAG00000027576)	zgc:153317 (ENSPNAG00000006441)	slc30a4 (ENSPNAG00000027627)	bloc1s6 (ENSPNAG00000027639)	mibp2 (ENSPNAG00000027674)	ENSPNAG00000027694	ENSPNAG00000027974
Mexicana tetra	MODERN SPECIES	614	cyp19a1a (ENSAMXG00000042616)	gldn (ENSAMXG00000043664)	dmxl2 (ENSAMXG00000035616)	sema6dl (ENSAMXG00000036569)	slc24a5 (ENSAMXG00000030249)	myef2 (ENSAMXG00000038244)	CTXN2 (ENSAMXG00000043103)	SLC12A1 (ENSAMXG00000035580)	ENSAMXG00000041081	dut (ENSAMXG00000035045)	FBN1 (ENSAMXG00000032050)	ENSAMXG00000032505	SECISBP2L (ENSAMXG00000037811)	fgf7 (ENSAMXG00000033116)	ENSAMXG00000035804	dtwd1 (ENSAMXG00000036176) ##22	ENSAMXG00000037222	ENSAMXG00000043363	spata5l1 (ENSAMXG00000031455)	zgc:153317 (ENSAMXG00000042391)	slc30a4 (ENSAMXG00000043270)	bloc1s6 (ENSAMXG00000029463)	mibp2 (ENSAMXG00000040660)	ENSAMXG00000035375	SPPL2A (ENSAMXG00000011067)	ENSAMXG00000033315	trpm7 (ENSAMXG00000040086)	ENSAMXG00000038145	USP8 (ENSAMXG00000041256)	gabpb1 (ENSAMXG00000039169)	hdc (ENSAMXG00000041840)
Electric eel	MODERN SPECIES	431											KCNJ5 (ENSEEEG00000023179)	KCNJ1 (ENSEEEG00000023177)	FBN1 (ENSEEEG00000023165)	ENSEEEG00000023151	fgf7 (ENSEEEG00000023150)	dtwd1 (ENSEEEG00000023149) ##22	ENSEEEG00000023037	spata5l1 (ENSEEEG00000023028)	ENSEEEG00000023027	slc30a4 (ENSEEEG00000023026)	bloc1s6 (ENSEEEG00000023021)	mibp2 (ENSEEEG00000023020)	ENSEEEG00000023019	SPPL2A (ENSEEEG00000023018)	trpm7 (ENSEEEG00000022730)	USP8 (ENSEEEG00000022668)	gabpb1 (ENSEEEG00000022667)	hdc (ENSEEEG00000022665)	slc27a2a (ENSEEEG00000022656)	ENSEEEG00000022654
Channel catfish	MODERN SPECIES	23	MYO5A (ENSIPUG00000016577)	gnb5b (ENSIPUG00000016518)	bcl2l10 (ENSIPUG00000016501)	mapk6 (ENSIPUG00000016475)	ENSIPUG00000016463	ENSIPUG00000016446	ENSIPUG00000016438	ENSIPUG00000016403	ENSIPUG00000016355	ENSIPUG00000016341	bloc1s6 (ENSIPUG00000016333)	slc30a4 (ENSIPUG00000016324)	c4h15orf48 (ENSIPUG00000016311)	spata5l1 (ENSIPUG00000016296)	fgf7 (ENSIPUG00000016280)	dtwd1 (ENSIPUG00000016270) ##22	ENSIPUG00000016208	ENSIPUG00000016185	ENSIPUG00000016169	ENSIPUG00000016150	ENSIPUG00000016144	ENSIPUG00000016135	fam214a (ENSIPUG00000016104)	onecut1 (ENSIPUG00000016078)	UNC13C (ENSIPUG00000016019)	rab27a (ENSIPUG00000015989)	ENSIPUG00000015974	pigb (ENSIPUG00000015958)	ccpg1 (ENSIPUG00000015938)	ENSIPUG00000015930	DYX1C1 (ENSIPUG00000015841)
Cyprinoidei	ANCESTRAL SPECIES	143								ENSGT01030000234532.A.b.t	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00490000043356.a	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000158245.dc	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000157947.a.b	ENSGT00390000011613
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	431															ENSGT00940000159843.f	ENSGT00940000153766.B.k.a ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277.g	ENSGT00940000153766.B.k.b ##22	ENSGT00390000009277.h	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.sc	ENSGT00940000159842.rc.a	ENSGT00940000158245.dc	ENSGT00940000157722.h	ENSGT00940000157091.l	ENSGT00940000157091.k	ENSGT00940000157542	ENSGT00940000157875
Goldfish	MODERN SPECIES	9	cox5ab (ENSCARG00000001999)	fam219b (ENSCARG00000002046)	ENSCARG00000002074	ENSCARG00000002100	cyp1a (ENSCARG00000002143)	CSK (ENSCARG00000002220)	cplx3b (ENSCARG00000002286)	ENSCARG00000002293	ulk3 (ENSCARG00000002384)	tm2d3 (ENSCARG00000002507)	larp6a (ENSCARG00000002513)	CTXN2 (ENSCARG00000002518)	dut (ENSCARG00000002810)	SECISBP2L (ENSCARG00000003027)	fgf7 (ENSCARG00000003047)	dtwd1 (ENSCARG00000003063) ##22	zgc:153317 (ENSCARG00000003072)	slc30a4 (ENSCARG00000003080)	mibp2 (ENSCARG00000003091)	ENSCARG00000003108	SPPL2A (ENSCARG00000003142)	trpm7 (ENSCARG00000003284)	ENSCARG00000003442	gabpb1 (ENSCARG00000003457)	slc27a2a (ENSCARG00000003465)	gatm (ENSCARG00000003508)	pde8a (ENSCARG00000003538)	WHAMM (ENSCARG00000003565)	homer2 (ENSCARG00000003575)	ENSCARG00000003588	HDGFL3 (ENSCARG00000003594)
Cyprininae_a	ANCESTRAL SPECIES	689															ENSGT00940000159843.f	ENSGT00940000153766.B.k.a ##22	ENSGT00390000004624.a.b	ENSGT00940000153766.B.l ##22	ENSGT00940000160700	ENSGT00390000009277.g
Common carp reference	MODERN SPECIES	9	ENSCCRG00000034245	ENSCCRG00000080605	ENSCCRG00000034367	ENSCCRG00000046420	larp6a (ENSCCRG00000008982)	tm2d3 (ENSCCRG00000063073)	ENSCCRG00000068784	ENSCCRG00000008970	slc24a5 (ENSCCRG00000008959)	myef2 (ENSCCRG00000061413)	CTXN2 (ENSCCRG00000067222)	FBN1 (ENSCCRG00000046007)	SLC12A1 (ENSCCRG00000072933)	ENSCCRG00000050773	fgf7 (ENSCCRG00000078422)	dtwd1 (ENSCCRG00000017138) ##22	ENSCCRG00000065096	ENSCCRG00000078143	ENSCCRG00000064509	zgc:153317 (ENSCCRG00000038113)	ENSCCRG00000015148	ENSCCRG00000043353	USP8 (ENSCCRG00000074705)	hdc (ENSCCRG00000049366)	zgc:158482 (ENSCCRG00000031854)	pde8a (ENSCCRG00000069907)	ENSCCRG00000079133	WHAMM (ENSCCRG00000070235)	ENSCCRG00000066171	HDGFL3 (ENSCCRG00000048987)	ENSCCRG00000052235
Cyprininae	ANCESTRAL SPECIES	431											ENSGT00940000159843.f	ENSGT00940000153766.B.k.a ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277.g	ENSGT00940000153766.B.k.b ##22	ENSGT00390000009277.h	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.sc	ENSGT00940000159842.rc.a	ENSGT00940000158245.dc	ENSGT00940000157722.h	ENSGT00940000157091.l	ENSGT00940000157091.k	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000157947.a.b	ENSGT00390000011613	ENSGT00940000156422
Cyprininae_a	ANCESTRAL SPECIES	325						ENSGT00940000158389.g.b	ENSGT00940000159103.k	ENSGT00940000157011	ENSGT00940000156594	ENSGT01030000234532.A.b.t	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00490000043356.a	ENSGT00940000159843.e	ENSGT00940000153766.B.k.b ##22	ENSGT00390000009277.h	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.rc.a	ENSGT00940000158245.dc	ENSGT00940000157722.h	ENSGT00940000157091.l	ENSGT00940000157091.k	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000157947.a.b	ENSGT00940000164068.a.b.b	ENSGT00390000011613	ENSGT00940000156422
Common carp reference	MODERN SPECIES	19	ENSCCRG00000064725	ENSCCRG00000001117	ENSCCRG00000004571	ENSCCRG00000008997	CSK (ENSCCRG00000009011)	ENSCCRG00000058867	ENSCCRG00000034224	ULK3 (ENSCCRG00000034216)	ENSCCRG00000056083	ENSCCRG00000034206	larp6a (ENSCCRG00000069618)	dut (ENSCCRG00000010105)	ENSCCRG00000081561	SECISBP2L (ENSCCRG00000033388)	fgf7 (ENSCCRG00000066176)	dtwd1 (ENSCCRG00000016304) ##22	slc30a4 (ENSCCRG00000076898)	zgc:153317 (ENSCCRG00000044187)	bloc1s6 (ENSCCRG00000015224)	mibp2 (ENSCCRG00000072914)	ENSCCRG00000076045	trpm7 (ENSCCRG00000035964)	SPPL2A (ENSCCRG00000009471)	USP8 (ENSCCRG00000069890)	gabpb1 (ENSCCRG00000014831)	slc27a2a (ENSCCRG00000021357)	gatm (ENSCCRG00000027820)	pde8a (ENSCCRG00000056992)	WHAMM (ENSCCRG00000052466)	homer2 (ENSCCRG00000008463)	HDGFL3 (ENSCCRG00000073324)
Cyprininae	ANCESTRAL SPECIES	403	ENSGT00940000157431.c.b	ENSGT00950000182938.b.b.b.b.a.e.a	ENSGT00390000001195.b	ENSGT00940000157689.c	ENSGT00940000154969.a	ENSGT00940000158389.g	ENSGT00940000159103.k	ENSGT00940000157011	ENSGT00940000156594	ENSGT01030000234532.A.b.t	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00490000043356.a	ENSGT00940000159843.e	ENSGT00940000153766.B.l ##22
Cyprininae_a	ANCESTRAL SPECIES	689													ENSGT00940000159843.f	ENSGT00940000153766.B.k.a ##22	ENSGT00390000004624.a.b	ENSGT00940000153766.B.l ##22	ENSGT00940000160700	ENSGT00390000009277.g
Golden-line barbel	MODERN SPECIES	200	ENSSGRG00000048395	cyp1a (ENSSGRG00000048397)	CSK (ENSSGRG00000048450)	ENSSGRG00000048934	ENSSGRG00000048935	ENSSGRG00000048940	tm2d3 (ENSSGRG00000048942)	ENSSGRG00000048944	larp6a (ENSSGRG00000048945)	myef2 (ENSSGRG00000048946)	CTXN2 (ENSSGRG00000048949)	ENSSGRG00000048950	dut (ENSSGRG00000048952)	ENSSGRG00000048958	fgf7 (ENSSGRG00000048959)	dtwd1 (ENSSGRG00000048960) ##22	spata5l1 (ENSSGRG00000048963)	zgc:153317 (ENSSGRG00000048964)	slc30a4 (ENSSGRG00000048965)	bloc1s6 (ENSSGRG00000048966)	mibp2 (ENSSGRG00000048967)	mibp2 (ENSSGRG00000048968)	ENSSGRG00000048969	trpm7 (ENSSGRG00000049002)	gabpb1 (ENSSGRG00000049305)	gatm (ENSSGRG00000049307)	pde8a (ENSSGRG00000049322)	ENSSGRG00000049329	WHAMM (ENSSGRG00000049336)	homer2 (ENSSGRG00000049341)	HDGFL3 (ENSSGRG00000049347)
Zebrafish	MODERN SPECIES	9	eif2a (ENSDARG00000101061)	ENSDARG00000111944	serp1 (ENSDARG00000099439)	LRCH3 (ENSDARG00000100679)	ENSDARG00000069723	pdcd10a (ENSDARG00000035054)	serpini1 (ENSDARG00000034168)	ENSDARG00000111801	golim4a (ENSDARG00000113393)	slc24a5 (ENSDARG00000024771)	myef2 (ENSDARG00000059398)	SLC12A1 (ENSDARG00000098096)	dut (ENSDARG00000106529)	ENSDARG00000100084	fgf7 (ENSDARG00000059387)	dtwd1 (ENSDARG00000111509) ##22	mibp2 (ENSDARG00000101844)	bloc1s6 (ENSDARG00000042933)	slc30a4 (ENSDARG00000007180)	C18H15orf48 (ENSDARG00000092903)	spata5l1 (ENSDARG00000061763)	ENSDARG00000092522	cyp1a (ENSDARG00000098315)	ulk3 (ENSDARG00000101661)	cplx3b (ENSDARG00000089486)	RGS9BP (ENSDARG00000086756)	zdhhc7 (ENSDARG00000019484)	nip7 (ENSDARG00000059075)	cog8 (ENSDARG00000002798)	NOB1 (ENSDARG00000016080)	WDR59 (ENSDARG00000088817)
Clupeiformes	ANCESTRAL SPECIES	44	ENSGT00940000155491.d	ENSGT00390000003488.a.a	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.a.b	ENSGT00490000043356.a	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613
Denticle herring	MODERN SPECIES	7	ENSDCDG00000035833	tnfaip8l3 (ENSDCDG00000035831)	cyp19a1a (ENSDCDG00000035826)	gldn (ENSDCDG00000035812)	dmxl2 (ENSDCDG00000035771)	sema6dl (ENSDCDG00000035664)	slc24a5 (ENSDCDG00000035652)	myef2 (ENSDCDG00000035643)	CTXN2 (ENSDCDG00000035633)	SLC12A1 (ENSDCDG00000035132)	dut (ENSDCDG00000034885)	FBN1 (ENSDCDG00000034768)	ENSDCDG00000034746	SECISBP2L (ENSDCDG00000034733)	fgf7 (ENSDCDG00000034727)	dtwd1 (ENSDCDG00000034723) ##22	ENSDCDG00000034696	spata5l1 (ENSDCDG00000034686)	zgc:153317 (ENSDCDG00000034684)	slc30a4 (ENSDCDG00000034681)	bloc1s6 (ENSDCDG00000034679)	mibp2 (ENSDCDG00000034675)	ENSDCDG00000034671	SPPL2A (ENSDCDG00000034664)	trpm7 (ENSDCDG00000032159)	USP8 (ENSDCDG00000031420)	gabpb1 (ENSDCDG00000031385)	hdc (ENSDCDG00000030901)	slc27a2a (ENSDCDG00000030799)	ENSDCDG00000030474	ENSDCDG00000029976
Euteleosteomorpha	ANCESTRAL SPECIES	51	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000169841	ENSGT00990000205468	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000158245	ENSGT00940000157722	ENSGT00940000157091	ENSGT01090000260003.a.b.b.a.a.a.b.a	ENSGT01000000214413.a.v	ENSGT00940000155347.a.b	ENSGT00940000154555.e.a	ENSGT00940000157573	ENSGT00950000183103.c
Acanthomorphata	ANCESTRAL SPECIES	105	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669
Euacanthomorphacea	ANCESTRAL SPECIES	25	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669
Percomorphaceae	ANCESTRAL SPECIES	15	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Tiger tail seahorse	MODERN SPECIES	348	tnfaip8l3 (ENSHCOG00000001518)	cyp19a1a (ENSHCOG00000001526)	gldn (ENSHCOG00000001538)	dmxl2 (ENSHCOG00000001569)	sema6dl (ENSHCOG00000001615)	ENSHCOG00000001637	slc24a5 (ENSHCOG00000001643)	myef2 (ENSHCOG00000001652)	CTXN2 (ENSHCOG00000001655)	SLC12A1 (ENSHCOG00000001677)	dut (ENSHCOG00000001691)	FBN1 (ENSHCOG00000001724)	SECISBP2L (ENSHCOG00000001763)	cops2 (ENSHCOG00000001781)	fgf7 (ENSHCOG00000001786)	dtwd1 (ENSHCOG00000001789) ##22	ENSHCOG00000001810	spata5l1 (ENSHCOG00000001837)	zgc:153317 (ENSHCOG00000001848)	slc30a4 (ENSHCOG00000001861)	bloc1s6 (ENSHCOG00000001868)	mibp2 (ENSHCOG00000001880)	PLEKHA7 (ENSHCOG00000001917)	sox6 (ENSHCOG00000001950)	ENSHCOG00000001959	ENSHCOG00000001967	CYP2R1 (ENSHCOG00000001974)	PDE3B (ENSHCOG00000002003)	copb1 (ENSHCOG00000002030)	rras2 (ENSHCOG00000002043)	TUB (ENSHCOG00000002052)
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Pomacentridae	ANCESTRAL SPECIES	15	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc.d	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Pomacentridae_A	ANCESTRAL SPECIES	28	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc.d	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Amphiprion	ANCESTRAL SPECIES	88	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc.d	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Orange clownfish	MODERN SPECIES		cyp19a1a (ENSAPEG00000024822)	gldn (ENSAPEG00000024829)	dmxl2 (ENSAPEG00000024830)	sema6dl (ENSAPEG00000024831)	ENSAPEG00000024832	slc24a5 (ENSAPEG00000024833)	myef2 (ENSAPEG00000024834)	CTXN2 (ENSAPEG00000024835)	SLC12A1 (ENSAPEG00000024836)	dut (ENSAPEG00000024837)	FBN1 (ENSAPEG00000024838)	ENSAPEG00000024839	SECISBP2L (ENSAPEG00000024840)	cops2 (ENSAPEG00000024841)	fgf7 (ENSAPEG00000000282)	dtwd1 (ENSAPEG00000000284) ##22	ENSAPEG00000000285	spata5l1 (ENSAPEG00000000289)	zgc:153317 (ENSAPEG00000000290)	slc30a4 (ENSAPEG00000000342)	bloc1s6 (ENSAPEG00000000384)	mibp2 (ENSAPEG00000000403)	mfge8a (ENSAPEG00000000448)	abhd2a (ENSAPEG00000000449)	ENSAPEG00000000487	slc39a1 (ENSAPEG00000000497)	tmem208 (ENSAPEG00000000523)	smad6a (ENSAPEG00000000562)	SMAD3 (ENSAPEG00000000565)	map2k5 (ENSAPEG00000000578)	ENSAPEG00000000686
Clown anemonefish	MODERN SPECIES	608	gldn (ENSAOCG00000017844)	dmxl2 (ENSAOCG00000017786)	sema6dl (ENSAOCG00000017613)	ENSAOCG00000017502	slc24a5 (ENSAOCG00000017491)	myef2 (ENSAOCG00000017431)	CTXN2 (ENSAOCG00000017396)	SLC12A1 (ENSAOCG00000017373)	dut (ENSAOCG00000002392)	FBN1 (ENSAOCG00000017226)	ENSAOCG00000017040	ENSAOCG00000017027	SECISBP2L (ENSAOCG00000017002)	cops2 (ENSAOCG00000016910)	fgf7 (ENSAOCG00000016852)	dtwd1 (ENSAOCG00000016804) ##22	ENSAOCG00000016782	spata5l1 (ENSAOCG00000001159)	zgc:153317 (ENSAOCG00000016673)	slc30a4 (ENSAOCG00000016607)	bloc1s6 (ENSAOCG00000016562)	mibp2 (ENSAOCG00000016545)	mfge8a (ENSAOCG00000016526)	ABHD2 (ENSAOCG00000016511)	ENSAOCG00000001129
Spiny chromis	MODERN SPECIES	525				ENSAPOG00000014980	slc24a5 (ENSAPOG00000015022)	myef2 (ENSAPOG00000015050)	CTXN2 (ENSAPOG00000015066)	SLC12A1 (ENSAPOG00000015081)	dut (ENSAPOG00000015093)	FBN1 (ENSAPOG00000015354)	ENSAPOG00000015395	ENSAPOG00000015422	SECISBP2L (ENSAPOG00000015429)	cops2 (ENSAPOG00000015494)	fgf7 (ENSAPOG00000015506)	dtwd1 (ENSAPOG00000015565) ##22	ENSAPOG00000015665	spata5l1 (ENSAPOG00000015677)	zgc:153317 (ENSAPOG00000015705)	slc30a4 (ENSAPOG00000015740)	bloc1s6 (ENSAPOG00000015771)	mibp2 (ENSAPOG00000015803)	mfge8a (ENSAPOG00000015806)	ABHD2 (ENSAPOG00000015821)
Bicolor damselfish	MODERN SPECIES	300				sema6dl (ENSSPAG00000021621)	ENSSPAG00000021600	slc24a5 (ENSSPAG00000021581)	myef2 (ENSSPAG00000021514)	CTXN2 (ENSSPAG00000021497)	SLC12A1 (ENSSPAG00000020240)	dut (ENSSPAG00000020080)	FBN1 (ENSSPAG00000019958)	ENSSPAG00000019929	SECISBP2L (ENSSPAG00000019869)	cops2 (ENSSPAG00000019812)	fgf7 (ENSSPAG00000019797)	dtwd1 (ENSSPAG00000019785) ##22	ENSSPAG00000019732	spata5l1 (ENSSPAG00000019717)	zgc:153317 (ENSSPAG00000019658)	slc30a4 (ENSSPAG00000019624)	bloc1s6 (ENSSPAG00000019598)	mibp2 (ENSSPAG00000019569)	mfge8a (ENSSPAG00000019544)	abhd2a (ENSSPAG00000019523)	ENSSPAG00000019507	slc39a1 (ENSSPAG00000019503)	tmem208 (ENSSPAG00000019488)	smad6a (ENSSPAG00000019475)	SMAD3 (ENSSPAG00000019459)	map2k5 (ENSSPAG00000019430)	skor1a (ENSSPAG00000019416)
Cichlidae	ANCESTRAL SPECIES	11	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00390000000223	ENSGT00390000008139	ENSGT00940000158146.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00390000008139	ENSGT00940000158146.a
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00390000000223	ENSGT00390000008139	ENSGT00940000158146.a
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000000223	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00390000008139	ENSGT00940000158146.a
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000180588	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT01030000234614.B.a.a.a.s.b	ENSGT00390000000223	ENSGT00390000008139	ENSGT00940000158146.a
Zebra mbuna	MODERN SPECIES	1091	dut (ENSMZEG00005007493)	SLC12A1 (ENSMZEG00005007840)	CTXN2 (ENSMZEG00005011818)	myef2 (ENSMZEG00005011832)	slc24a5 (ENSMZEG00005011849)	ENSMZEG00005011869	sema6dl (ENSMZEG00005011901)	ENSMZEG00005012049	sult2st3 (ENSMZEG00005012055)	ENSMZEG00005012063	ENSMZEG00005012071	SECISBP2L (ENSMZEG00005012079)	cops2 (ENSMZEG00005012100)	ENSMZEG00005012113	fgf7 (ENSMZEG00005012118)	dtwd1 (ENSMZEG00005012129) ##22	ENSMZEG00005012137	spata5l1 (ENSMZEG00005012171)	zgc:153317 (ENSMZEG00005012182)	slc30a4 (ENSMZEG00005012190)	bloc1s6 (ENSMZEG00005012197)	ENSMZEG00005012203	mibp2 (ENSMZEG00005012218)	HAPLN3 (ENSMZEG00005012228)	mfge8a (ENSMZEG00005012239)	abhd2a (ENSMZEG00005012251)	ENSMZEG00005012269	slc39a1 (ENSMZEG00005012287)	STOM (ENSMZEG00005012297)	ENSMZEG00005012309	tmem208 (ENSMZEG00005012330)
Eastern happy	MODERN SPECIES		gldn (ENSACLG00000018741)	dmxl2 (ENSACLG00000018247)	sema6dl (ENSACLG00000017894)	ENSACLG00000017790	slc24a5 (ENSACLG00000017757)	myef2 (ENSACLG00000017421)	CTXN2 (ENSACLG00000017398)	SLC12A1 (ENSACLG00000017351)	dut (ENSACLG00000017332)	FBN1 (ENSACLG00000017109)	ENSACLG00000017066	SECISBP2L (ENSACLG00000017020)	cops2 (ENSACLG00000016989)	ENSACLG00000016973	fgf7 (ENSACLG00000016954)	dtwd1 (ENSACLG00000016942) ##22	ENSACLG00000016792	spata5l1 (ENSACLG00000016764)	zgc:153317 (ENSACLG00000016750)	slc30a4 (ENSACLG00000016688)	bloc1s6 (ENSACLG00000016660)	mibp2 (ENSACLG00000016621)	HAPLN3 (ENSACLG00000016603)	mfge8a (ENSACLG00000016536)	abhd2a (ENSACLG00000016471)	ENSACLG00000016438	slc39a1 (ENSACLG00000016397)	ENSACLG00000016386	STOM (ENSACLG00000016358)	tmem208 (ENSACLG00000016345)	smad6a (ENSACLG00000016319)
P. nyererei	MODERN SPECIES	479	cyp19a1a (ENSPNYG00000011284)	gldn (ENSPNYG00000011228)	dmxl2 (ENSPNYG00000011039)	sema6dl (ENSPNYG00000010980)	ENSPNYG00000010969	slc24a5 (ENSPNYG00000010946)	myef2 (ENSPNYG00000010879)	CTXN2 (ENSPNYG00000010863)	SLC12A1 (ENSPNYG00000009465)	dut (ENSPNYG00000009044)	FBN1 (ENSPNYG00000008831)	ENSPNYG00000008784	SECISBP2L (ENSPNYG00000008760)	cops2 (ENSPNYG00000008742)	fgf7 (ENSPNYG00000008718)	dtwd1 (ENSPNYG00000008711) ##22	ENSPNYG00000008639	zgc:153317 (ENSPNYG00000008598)	spata5l1 (ENSPNYG00000008552)	slc30a4 (ENSPNYG00000008509)	bloc1s6 (ENSPNYG00000008469)	mibp2 (ENSPNYG00000008446)	HAPLN3 (ENSPNYG00000008243)	mfge8a (ENSPNYG00000008173)	abhd2a (ENSPNYG00000008142)	ENSPNYG00000008122	slc39a1 (ENSPNYG00000008054)	ENSPNYG00000008039	STOM (ENSPNYG00000008024)	tmem208 (ENSPNYG00000007964)	smad6a (ENSPNYG00000007929)
Burton s mouthbrooder	MODERN SPECIES	530				sema6dl (ENSHBUG00000016128)	ENSHBUG00000015892	slc24a5 (ENSHBUG00000015877)	myef2 (ENSHBUG00000015847)	CTXN2 (ENSHBUG00000015828)	SLC12A1 (ENSHBUG00000015725)	dut (ENSHBUG00000012784)	FBN1 (ENSHBUG00000012766)	ENSHBUG00000012568	SECISBP2L (ENSHBUG00000012549)	cops2 (ENSHBUG00000012467)	fgf7 (ENSHBUG00000012453)	dtwd1 (ENSHBUG00000012442) ##22	ENSHBUG00000012430	spata5l1 (ENSHBUG00000012355)	zgc:153317 (ENSHBUG00000012341)	slc30a4 (ENSHBUG00000012324)	bloc1s6 (ENSHBUG00000012295)	mibp2 (ENSHBUG00000012273)	HAPLN3 (ENSHBUG00000012266)	mfge8a (ENSHBUG00000012251)	abhd2a (ENSHBUG00000000339)	ENSHBUG00000012195	slc39a1 (ENSHBUG00000012168)	STOM (ENSHBUG00000012152)	ENSHBUG00000012137	tmem208 (ENSHBUG00000012128)	smad6a (ENSHBUG00000012111)
Lyretail cichlid	MODERN SPECIES	320	cyp19a1a (ENSNBRG00000023814)	gldn (ENSNBRG00000023805)	dmxl2 (ENSNBRG00000023751)	sema6dl (ENSNBRG00000023681)	ENSNBRG00000023648	slc24a5 (ENSNBRG00000023639)	myef2 (ENSNBRG00000023602)	CTXN2 (ENSNBRG00000023580)	SLC12A1 (ENSNBRG00000022889)	FBN1 (ENSNBRG00000022572)	ENSNBRG00000022546	ENSNBRG00000022537	SECISBP2L (ENSNBRG00000022500)	cops2 (ENSNBRG00000022478)	fgf7 (ENSNBRG00000022464)	dtwd1 (ENSNBRG00000022453) ##22	ENSNBRG00000022427	spata5l1 (ENSNBRG00000022393)	zgc:153317 (ENSNBRG00000022374)	slc30a4 (ENSNBRG00000022345)	bloc1s6 (ENSNBRG00000022319)	mibp2 (ENSNBRG00000022296)	HAPLN3 (ENSNBRG00000022217)	mfge8a (ENSNBRG00000022184)	abhd2a (ENSNBRG00000022158)	ENSNBRG00000022124	ENSNBRG00000022117	slc39a1 (ENSNBRG00000022103)	ENSNBRG00000022097	STOM (ENSNBRG00000022084)	tmem208 (ENSNBRG00000022070)
Nile tilapia	MODERN SPECIES		ENSONIG00000028662	PHKA2 (ENSONIG00000037084)	ppef1 (ENSONIG00000039742)	ENSONIG00000035518	ENSONIG00000042066	slc24a5 (ENSONIG00000033946)	myef2 (ENSONIG00000013374)	CTXN2 (ENSONIG00000020888)	SLC12A1 (ENSONIG00000013365)	dut (ENSONIG00000013362)	FBN1 (ENSONIG00000013348)	ENSONIG00000030018	SECISBP2L (ENSONIG00000013343)	cops2 (ENSONIG00000013341)	fgf7 (ENSONIG00000013338)	dtwd1 (ENSONIG00000013335) ##22	ENSONIG00000013323	spata5l1 (ENSONIG00000013321)	zgc:153317 (ENSONIG00000038594)	bloc1s6 (ENSONIG00000013314)	slc30a4 (ENSONIG00000013317)	mibp2 (ENSONIG00000013305)	HAPLN3 (ENSONIG00000013302)	mfge8a (ENSONIG00000013296)	abhd2a (ENSONIG00000013290)	ENSONIG00000013288	slc39a1 (ENSONIG00000013286)	STOM (ENSONIG00000020887)	ENSONIG00000042582	tmem208 (ENSONIG00000013283)	smad6a (ENSONIG00000013280)
Midas cichlid	MODERN SPECIES	671		sema6dl (ENSACIG00000020664)	ENSACIG00000020658	slc24a5 (ENSACIG00000020611)	myef2 (ENSACIG00000020446)	CTXN2 (ENSACIG00000020430)	SLC12A1 (ENSACIG00000020371)	dut (ENSACIG00000020238)	ENSACIG00000020196	ENSACIG00000020179	ENSACIG00000020161	ENSACIG00000020118	SECISBP2L (ENSACIG00000020051)	cops2 (ENSACIG00000020020)	fgf7 (ENSACIG00000020011)	dtwd1 (ENSACIG00000019986) ##22	ENSACIG00000019943	spata5l1 (ENSACIG00000019928)	zgc:153317 (ENSACIG00000019890)	slc30a4 (ENSACIG00000019843)	bloc1s6 (ENSACIG00000019824)	mibp2 (ENSACIG00000019799)	HAPLN3 (ENSACIG00000019610)	mfge8a (ENSACIG00000019394)	ABHD2 (ENSACIG00000019350)	ENSACIG00000019338	ENSACIG00000019333
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Aplocheiloidei	ANCESTRAL SPECIES	141				ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b
Turquoise killifish	MODERN SPECIES	1616	dmxl2 (ENSNFUG00015017061)	ENSNFUG00015016858	SEMA6DL (ENSNFUG00015015127)	RNF128 (ENSNFUG00015014983)	slc24a5 (ENSNFUG00015014791)	myef2 (ENSNFUG00015014748)	CTXN2 (ENSNFUG00015014721)	SLC12A1 (ENSNFUG00015012441)	DUT (ENSNFUG00015012340)	FBN1 (ENSNFUG00015012042)	ENSNFUG00015012019	ENSNFUG00015012013	SECISBP2L (ENSNFUG00015011986)	cops2 (ENSNFUG00015011860)	fgf7 (ENSNFUG00015011824)	DTWD1 (ENSNFUG00015011814) ##22	ENSNFUG00015011688	SPATA5L1 (ENSNFUG00015011676)	zgc:153317 (ENSNFUG00015011668)	SLC30A4 (ENSNFUG00015011646)	bloc1s6 (ENSNFUG00015011632)	MIBP2 (ENSNFUG00015011622)	ENSNFUG00015011612	ENSNFUG00015011607	MFGE8 (ENSNFUG00015010533)	ENSNFUG00015010457	SMAD6A (ENSNFUG00015010448)	ENSNFUG00015010440	map2k5 (ENSNFUG00015010331)	SKOR1B (ENSNFUG00015010285)	PIAS1 (ENSNFUG00015010276)
Mangrove rivulus	MODERN SPECIES	756															ENSKMAG00000013467	dtwd1 (ENSKMAG00000013529) ##22	spata5l1 (ENSKMAG00000013549)	zgc:153317 (ENSKMAG00000013573)	slc30a4 (ENSKMAG00000013591)	bloc1s6 (ENSKMAG00000013613)	mibp2 (ENSKMAG00000013628)	mfge8a (ENSKMAG00000013657)
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a.f	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Poecilia	ANCESTRAL SPECIES	4	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a.f	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
NAME_6	ANCESTRAL SPECIES	52				ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Sailfin molly	MODERN SPECIES	1897												ENSPLAG00000017336	SECISBP2L (ENSPLAG00000017301)	cops2 (ENSPLAG00000017239)	fgf7 (ENSPLAG00000000391)	dtwd1 (ENSPLAG00000017196) ##22
Amazon molly	MODERN SPECIES	403				sema6dl (ENSPFOG00000001448)	ENSPFOG00000020293	slc24a5 (ENSPFOG00000001610)	myef2 (ENSPFOG00000001754)	CTXN2 (ENSPFOG00000020294)	SLC12A1 (ENSPFOG00000002101)	dut (ENSPFOG00000024148)	FBN1 (ENSPFOG00000002711)	ENSPFOG00000004088	SECISBP2L (ENSPFOG00000004217)	cops2 (ENSPFOG00000004790)	fgf7 (ENSPFOG00000004933)	dtwd1 (ENSPFOG00000004960) ##22	ENSPFOG00000021978	ENSPFOG00000005055	spata5l1 (ENSPFOG00000005380)	zgc:153317 (ENSPFOG00000005494)	zgc:153317 (ENSPFOG00000005496)	slc30a4 (ENSPFOG00000005499)	bloc1s6 (ENSPFOG00000005582)	mibp2 (ENSPFOG00000005643)	mfge8a (ENSPFOG00000005778)	ENSPFOG00000024476	abhd2a (ENSPFOG00000005907)	ENSPFOG00000006011	slc39a1 (ENSPFOG00000006114)	tmem208 (ENSPFOG00000006153)	smad6a (ENSPFOG00000006234)
Guppy	MODERN SPECIES	455	tnfaip8l3 (ENSPREG00000018651)	cyp19a1a (ENSPREG00000012213)	gldn (ENSPREG00000011547)	dmxl2 (ENSPREG00000011194)	sema6dl (ENSPREG00000011050)	ENSPREG00000011029	slc24a5 (ENSPREG00000011000)	myef2 (ENSPREG00000010801)	CTXN2 (ENSPREG00000010765)	SLC12A1 (ENSPREG00000009164)	dut (ENSPREG00000008810)	FBN1 (ENSPREG00000008692)	SECISBP2L (ENSPREG00000008660)	cops2 (ENSPREG00000008622)	fgf7 (ENSPREG00000008601)	dtwd1 (ENSPREG00000008579) ##22	ENSPREG00000008549	spata5l1 (ENSPREG00000008513)	zgc:153317 (ENSPREG00000008498)	slc30a4 (ENSPREG00000008454)	bloc1s6 (ENSPREG00000008429)	mibp2 (ENSPREG00000008371)	ENSPREG00000008362	mfge8a (ENSPREG00000008344)	abhd2a (ENSPREG00000008309)	ENSPREG00000008292	slc39a1 (ENSPREG00000008271)	tmem208 (ENSPREG00000008259)	smad6a (ENSPREG00000008242)	SMAD3 (ENSPREG00000008224)	map2k5 (ENSPREG00000008097)
Platyfish	MODERN SPECIES	18	cyp19a1a (ENSXMAG00000002192)	gldn (ENSXMAG00000002203)	dmxl2 (ENSXMAG00000002209)	sema6dl (ENSXMAG00000002234)	ENSXMAG00000020048	slc24a5 (ENSXMAG00000016727)	myef2 (ENSXMAG00000016686)	CTXN2 (ENSXMAG00000019617)	SLC12A1 (ENSXMAG00000016567)	dut (ENSXMAG00000026839)	FBN1 (ENSXMAG00000002249)	ENSXMAG00000002257	SECISBP2L (ENSXMAG00000002266)	cops2 (ENSXMAG00000002272)	fgf7 (ENSXMAG00000002280)	dtwd1 (ENSXMAG00000002282) ##22	ENSXMAG00000002284	spata5l1 (ENSXMAG00000002298)	zgc:153317 (ENSXMAG00000002303)	zgc:153317 (ENSXMAG00000024159)	slc30a4 (ENSXMAG00000002304)	bloc1s6 (ENSXMAG00000002310)	mibp2 (ENSXMAG00000002314)	mfge8a (ENSXMAG00000024531)	abhd2a (ENSXMAG00000021333)	ENSXMAG00000013063	slc39a1 (ENSXMAG00000002358)	tmem208 (ENSXMAG00000025720)	smad6a (ENSXMAG00000002372)	SMAD3 (ENSXMAG00000002377)	map2k5 (ENSXMAG00000002396)
NAME_4	ANCESTRAL SPECIES	6	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Sheepshead minnow	MODERN SPECIES	234	cyp19a1a (ENSCVAG00000011244)	gldn (ENSCVAG00000011216)	dmxl2 (ENSCVAG00000011203)	ENSCVAG00000011053	sema6dl (ENSCVAG00000011031)	ENSCVAG00000010837	slc24a5 (ENSCVAG00000010829)	myef2 (ENSCVAG00000010801)	CTXN2 (ENSCVAG00000010764)	SLC12A1 (ENSCVAG00000010745)	dut (ENSCVAG00000010672)	FBN1 (ENSCVAG00000010664)	SECISBP2L (ENSCVAG00000010490)	cops2 (ENSCVAG00000010417)	fgf7 (ENSCVAG00000010388)	dtwd1 (ENSCVAG00000010383) ##22	ENSCVAG00000010377	spata5l1 (ENSCVAG00000010290)	zgc:153317 (ENSCVAG00000010280)	slc30a4 (ENSCVAG00000010275)	bloc1s6 (ENSCVAG00000010241)	ENSCVAG00000010224
Mummichog	MODERN SPECIES	2381				sema6dl (ENSFHEG00000002354)	ENSFHEG00000002364	slc24a5 (ENSFHEG00000002377)	myef2 (ENSFHEG00000002386)	CTXN2 (ENSFHEG00000002395)	SLC12A1 (ENSFHEG00000002430)	dut (ENSFHEG00000002443)	FBN1 (ENSFHEG00000002535)	ENSFHEG00000002566	SECISBP2L (ENSFHEG00000002604)	cops2 (ENSFHEG00000002635)	fgf7 (ENSFHEG00000002649)	dtwd1 (ENSFHEG00000002658) ##22	ENSFHEG00000002718	spata5l1 (ENSFHEG00000002745)	zgc:153317 (ENSFHEG00000002784)	slc30a4 (ENSFHEG00000002802)	bloc1s6 (ENSFHEG00000002826)	mibp2 (ENSFHEG00000002843)	mfge8a (ENSFHEG00000000710)	abhd2a (ENSFHEG00000002888)	ENSFHEG00000002949	slc39a1 (ENSFHEG00000002989)	tmem208 (ENSFHEG00000003000)	smad6a (ENSFHEG00000003014)	SMAD3 (ENSFHEG00000003038)	map2k5 (ENSFHEG00000003062)	skor1a (ENSFHEG00000003074)
Oryzias	ANCESTRAL SPECIES	13	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Javanese ricefish	MODERN SPECIES	17	leo1 (ENSOJAG00000000660)	lysmd2 (ENSOJAG00000000648)	scg3 (ENSOJAG00000000637)	tnfaip8l3 (ENSOJAG00000000632)	gldn (ENSOJAG00000000624)	sema6dl (ENSOJAG00000000388)	slc24a5 (ENSOJAG00000000119)	myef2 (ENSOJAG00000022384)	SLC12A1 (ENSOJAG00000021409)	dut (ENSOJAG00000021291)	FBN1 (ENSOJAG00000020999)	ENSOJAG00000020958	SECISBP2L (ENSOJAG00000020945)	cops2 (ENSOJAG00000020919)	fgf7 (ENSOJAG00000020912)	dtwd1 (ENSOJAG00000020909) ##22	ENSOJAG00000020868	spata5l1 (ENSOJAG00000020864)	zgc:153317 (ENSOJAG00000020860)	slc30a4 (ENSOJAG00000020847)	bloc1s6 (ENSOJAG00000020836)	mibp2 (ENSOJAG00000020828)	mfge8a (ENSOJAG00000020551)	abhd2a (ENSOJAG00000020385)	ENSOJAG00000020364	slc39a1 (ENSOJAG00000020359)	tmem208 (ENSOJAG00000020347)	smad6a (ENSOJAG00000020339)	SMAD3 (ENSOJAG00000020254)	map2k5 (ENSOJAG00000020167)	skor1a (ENSOJAG00000020147)
Indian medaka	MODERN SPECIES	26	cyp19a1a (ENSOMEG00000010567)	gldn (ENSOMEG00000010517)	dmxl2 (ENSOMEG00000000249)	sema6dl (ENSOMEG00000000246)	ENSOMEG00000010170	slc24a5 (ENSOMEG00000010143)	myef2 (ENSOMEG00000010072)	CTXN2 (ENSOMEG00000009927)	SLC12A1 (ENSOMEG00000009905)	dut (ENSOMEG00000009841)	FBN1 (ENSOMEG00000009742)	ENSOMEG00000009587	SECISBP2L (ENSOMEG00000009535)	cops2 (ENSOMEG00000009424)	fgf7 (ENSOMEG00000009379)	dtwd1 (ENSOMEG00000009361) ##22	ENSOMEG00000009339	spata5l1 (ENSOMEG00000009305)	zgc:153317 (ENSOMEG00000009283)	slc30a4 (ENSOMEG00000009252)	bloc1s6 (ENSOMEG00000009201)	mibp2 (ENSOMEG00000009172)	mfge8a (ENSOMEG00000009145)	abhd2a (ENSOMEG00000009120)	ENSOMEG00000009080	slc39a1 (ENSOMEG00000009055)	tmem208 (ENSOMEG00000009028)	smad6a (ENSOMEG00000008997)	SMAD3 (ENSOMEG00000008975)	map2k5 (ENSOMEG00000008936)	skor1a (ENSOMEG00000008837)
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT01030000234518.B.a.b.a.b	ENSGT01030000234539.a.a.b.a.b.a.a	ENSGT00940000158440.g.a	ENSGT00940000157505	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000158146.a	ENSGT00390000008139	ENSGT00940000164669	ENSGT00940000164526.a	ENSGT00950000182902.b.a.d.a	ENSGT00940000156049.b	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00950000183158.D.b.f.qb	ENSGT00390000018390	ENSGT00940000158030	ENSGT00940000154412.B.b	ENSGT00940000157397	ENSGT01030000234532.A.b	ENSGT00940000158347.z	ENSGT00940000159303	ENSGT00390000000096.b.a
Japanese Medaka HdrR	MODERN SPECIES	17	PIAS1 (ENSORLG00000002077)	skor1a (ENSORLG00000002083)	ENSORLG00000028158	map2k5 (ENSORLG00000002158)	ENSORLG00000002207	smad6a (ENSORLG00000002227)	tmem208 (ENSORLG00000002234)	slc39a1 (ENSORLG00000029570)	ENSORLG00000002257	abhd2a (ENSORLG00000002287)	mfge8a (ENSORLG00000002302)	ENSORLG00000026175	SECISBP2L (ENSORLG00000002324)	cops2 (ENSORLG00000002351)	fgf7 (ENSORLG00000002360)	dtwd1 (ENSORLG00000002373) ##22	ENSORLG00000002434	spata5l1 (ENSORLG00000002443)	zgc:153317 (ENSORLG00000029581)	slc30a4 (ENSORLG00000002464)	bloc1s6 (ENSORLG00000002469)	mibp2 (ENSORLG00000002480)	FBN1 (ENSORLG00000002614)	dut (ENSORLG00000022206)	SLC12A1 (ENSORLG00000002682)	CTXN2 (ENSORLG00000023019)	myef2 (ENSORLG00000002730)	slc24a5 (ENSORLG00000002760)	ENSORLG00000002764	sema6dl (ENSORLG00000002823)	dmxl2 (ENSORLG00000002886)
Chinese medaka	MODERN SPECIES	510											mfge8a (ENSOSIG00000021811)	ENSOSIG00000021758	SECISBP2L (ENSOSIG00000021754)	cops2 (ENSOSIG00000021739)	fgf7 (ENSOSIG00000021728)	dtwd1 (ENSOSIG00000021722) ##22	ENSOSIG00000021688	spata5l1 (ENSOSIG00000021684)	zgc:153317 (ENSOSIG00000021681)	slc30a4 (ENSOSIG00000021679)	bloc1s6 (ENSOSIG00000021676)	mibp2 (ENSOSIG00000021675)	dut (ENSOSIG00000021660)	SLC12A1 (ENSOSIG00000021392)	CTXN2 (ENSOSIG00000021302)	myef2 (ENSOSIG00000021300)	slc24a5 (ENSOSIG00000021279)	ENSOSIG00000021275	sema6dl (ENSOSIG00000021250)
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Anabantaria	ANCESTRAL SPECIES	11	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505	ENSGT00940000158440.g.a
Climbing perch	MODERN SPECIES	16	cyp19a1a (ENSATEG00000017392)	gldn (ENSATEG00000017422)	dmxl2 (ENSATEG00000017438)	sema6dl (ENSATEG00000017659)	ENSATEG00000017812	slc24a5 (ENSATEG00000017821)	myef2 (ENSATEG00000017892)	CTXN2 (ENSATEG00000017922)	SLC12A1 (ENSATEG00000017929)	dut (ENSATEG00000018008)	FBN1 (ENSATEG00000018081)	ENSATEG00000028568	SECISBP2L (ENSATEG00000018252)	COPS2 (ENSATEG00000018268)	fgf7 (ENSATEG00000018281)	dtwd1 (ENSATEG00000029513) ##22	ENSATEG00000018300	spata5l1 (ENSATEG00000018358)	zgc:153317 (ENSATEG00000018366)	slc30a4 (ENSATEG00000018417)	bloc1s6 (ENSATEG00000026597)	mibp2 (ENSATEG00000018455)	MFGE8 (ENSATEG00000018480)	abhd2a (ENSATEG00000018488)	ENSATEG00000018520	slc39a1 (ENSATEG00000028960)	ENSATEG00000025806	smad6a (ENSATEG00000018586)	ENSATEG00000018596	ENSATEG00000013157	map2k5 (ENSATEG00000018621)
Siamese fighting fish	MODERN SPECIES	7	pomgnt2 (ENSBSLG00000022709)	snrka (ENSBSLG00000022703)	ENSBSLG00000022685	ENSBSLG00000022682	sema6dl (ENSBSLG00000021360)	ENSBSLG00000020665	slc24a5 (ENSBSLG00000020654)	myef2 (ENSBSLG00000020634)	CTXN2 (ENSBSLG00000020631)	SLC12A1 (ENSBSLG00000015117)	dut (ENSBSLG00000014998)	FBN1 (ENSBSLG00000014144)	SECISBP2L (ENSBSLG00000013681)	cops2 (ENSBSLG00000013489)	fgf7 (ENSBSLG00000013405)	dtwd1 (ENSBSLG00000013315) ##22	ENSBSLG00000013295	spata5l1 (ENSBSLG00000013225)	zgc:153317 (ENSBSLG00000013183)	slc30a4 (ENSBSLG00000013140)	bloc1s6 (ENSBSLG00000013105)	mibp2 (ENSBSLG00000013063)	ABHD2 (ENSBSLG00000012287)	ENSBSLG00000012265	ENSBSLG00000012260	fah (ENSBSLG00000012172)	mthfs (ENSBSLG00000012155)
Zig-zag eel	MODERN SPECIES	17	dmxl2 (ENSMAMG00000011273)	ENSMAMG00000011368	sema6dl (ENSMAMG00000011398)	ENSMAMG00000011452	slc24a5 (ENSMAMG00000011458)	myef2 (ENSMAMG00000011476)	CTXN2 (ENSMAMG00000011500)	SLC12A1 (ENSMAMG00000011512)	dut (ENSMAMG00000028152)	FBN1 (ENSMAMG00000011575)	ENSMAMG00000028025	ENSMAMG00000028034	SECISBP2L (ENSMAMG00000011674)	COPS2 (ENSMAMG00000011732)	FGF7 (ENSMAMG00000011783)	dtwd1 (ENSMAMG00000026826) ##22	ENSMAMG00000011790	spata5l1 (ENSMAMG00000011820)	zgc:153317 (ENSMAMG00000011844)	slc30a4 (ENSMAMG00000011974)	bloc1s6 (ENSMAMG00000012006)	mibp2 (ENSMAMG00000012031)	MFGE8 (ENSMAMG00000012053)	abhd2a (ENSMAMG00000012096)	ENSMAMG00000028309	slc39a1 (ENSMAMG00000012122)	ENSMAMG00000012132	smad6a (ENSMAMG00000012145)	ENSMAMG00000012151	map2k5 (ENSMAMG00000012181)	skor1a (ENSMAMG00000012260)
Carangaria	ANCESTRAL SPECIES	11	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Pleuronectoidei	ANCESTRAL SPECIES	10	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Turbot	MODERN SPECIES	17	gldn (ENSSMAG00000021274)	dmxl2 (ENSSMAG00000021275)	sema6dl (ENSSMAG00000021276)	ENSSMAG00000021277	slc24a5 (ENSSMAG00000021278)	myef2 (ENSSMAG00000021279)	CTXN2 (ENSSMAG00000021280)	SLC12A1 (ENSSMAG00000021281)	dut (ENSSMAG00000021282)	FBN1 (ENSSMAG00000021283)	ENSSMAG00000021284	SECISBP2L (ENSSMAG00000021285)	COPS2 (ENSSMAG00000021286)	ENSSMAG00000025054	FGF7 (ENSSMAG00000021287)	DTWD1 (ENSSMAG00000021289) ##22	ENSSMAG00000021288	spata5l1 (ENSSMAG00000021290)	zgc:153317 (ENSSMAG00000029975)	slc30a4 (ENSSMAG00000021292)	bloc1s6 (ENSSMAG00000021293)	mibp2 (ENSSMAG00000021294)	HAPLN3 (ENSSMAG00000030247)	MFGE8 (ENSSMAG00000021296)	abhd2a (ENSSMAG00000021297)	ENSSMAG00000021298	slc39a1 (ENSSMAG00000034740)	ENSSMAG00000021300	smad6a (ENSSMAG00000021301)	ENSSMAG00000021302	map2k5 (ENSSMAG00000021303)
Tongue sole	MODERN SPECIES	15	ENSCSEG00000012979	ENSCSEG00000012976	PIAS1 (ENSCSEG00000012959)	skor1a (ENSCSEG00000012944)	ENSCSEG00000012937	rufy2 (ENSCSEG00000012890)	ENSCSEG00000012883	fam120b (ENSCSEG00000012863)	dld (ENSCSEG00000012831)	mis12 (ENSCSEG00000012823)	ppm1g (ENSCSEG00000012809)	ENSCSEG00000012802	SECISBP2L (ENSCSEG00000012789)	cops2 (ENSCSEG00000012761)	fgf7 (ENSCSEG00000012750)	dtwd1 (ENSCSEG00000012745) ##22	ENSCSEG00000012721	spata5l1 (ENSCSEG00000012712)	zgc:153317 (ENSCSEG00000012700)	slc30a4 (ENSCSEG00000012686)	bloc1s6 (ENSCSEG00000012676)	mibp2 (ENSCSEG00000012672)	HAPLN3 (ENSCSEG00000012667)	mfge8a (ENSCSEG00000012660)	abhd2a (ENSCSEG00000012650)	ENSCSEG00000012628	slc39a1 (ENSCSEG00000012617)	tmem208 (ENSCSEG00000012613)	SMAD6 (ENSCSEG00000012602)	SMAD3 (ENSCSEG00000012585)	map2k5 (ENSCSEG00000012573)
Carangaria_A	ANCESTRAL SPECIES	19	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Barramundi perch	MODERN SPECIES	96	tnfaip8l3 (ENSLCAG00010004733)	cyp19a1a (ENSLCAG00010004693)	dmxl2 (ENSLCAG00010004591)	sema6dl (ENSLCAG00010004441)	ENSLCAG00010004382	slc24a5 (ENSLCAG00010004373)	myef2 (ENSLCAG00010004354)	CTXN2 (ENSLCAG00010004347)	SLC12A1 (ENSLCAG00010003607)	dut (ENSLCAG00010003411)	FBN1 (ENSLCAG00010002296)	ENSLCAG00010001909	SECISBP2L (ENSLCAG00010001900)	cops2 (ENSLCAG00010001882)	fgf7 (ENSLCAG00010001876)	dtwd1 (ENSLCAG00010001874) ##22	ENSLCAG00010001461	spata5l1 (ENSLCAG00010001260)	zgc:153317 (ENSLCAG00010001243)	slc30a4 (ENSLCAG00010001238)	bloc1s6 (ENSLCAG00010001233)	mibp2 (ENSLCAG00010001214)	HAPLN3 (ENSLCAG00010001202)	mfge8a (ENSLCAG00010001190)	abhd2a (ENSLCAG00010001176)	ENSLCAG00010001169	slc39a1 (ENSLCAG00010001163)	tmem208 (ENSLCAG00010001154)	smad6a (ENSLCAG00010001144)	SMAD3 (ENSLCAG00010001077)	map2k5 (ENSLCAG00010001045)
Seriola	ANCESTRAL SPECIES	73			ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Greater amberjack	MODERN SPECIES	242				sema6dl (ENSSDUG00000015922)	ENSSDUG00000015952	slc24a5 (ENSSDUG00000015957)	myef2 (ENSSDUG00000015983)	CTXN2 (ENSSDUG00000016024)	SLC12A1 (ENSSDUG00000016031)	dut (ENSSDUG00000016077)	FBN1 (ENSSDUG00000016108)	ENSSDUG00000016248	SECISBP2L (ENSSDUG00000016367)	cops2 (ENSSDUG00000016388)	fgf7 (ENSSDUG00000016430)	dtwd1 (ENSSDUG00000016453) ##22	ENSSDUG00000016471	spata5l1 (ENSSDUG00000016519)	zgc:153317 (ENSSDUG00000016526)	slc30a4 (ENSSDUG00000016531)	bloc1s6 (ENSSDUG00000016550)	mibp2 (ENSSDUG00000016586)	HAPLN3 (ENSSDUG00000016925)	mfge8a (ENSSDUG00000016943)	abhd2a (ENSSDUG00000016969)	ENSSDUG00000017002	slc39a1 (ENSSDUG00000017030)	tmem208 (ENSSDUG00000017044)	smad6a (ENSSDUG00000017082)	SMAD3 (ENSSDUG00000017091)	map2k5 (ENSSDUG00000017109)
Yellowtail amberjack	MODERN SPECIES	2930								ENSSLDG00000008827	dut (ENSSLDG00000008851)	FBN1 (ENSSLDG00000008900)	ENSSLDG00000009044	ENSSLDG00000009057	SECISBP2L (ENSSLDG00000009089)	cops2 (ENSSLDG00000009174)	fgf7 (ENSSLDG00000009222)	dtwd1 (ENSSLDG00000009340) ##22	ENSSLDG00000009249	spata5l1 (ENSSLDG00000009352)	zgc:153317 (ENSSLDG00000009371)	slc30a4 (ENSSLDG00000009443)	bloc1s6 (ENSSLDG00000009498)	mibp2 (ENSSLDG00000009812)	HAPLN3 (ENSSLDG00000010248)	mfge8a (ENSSLDG00000010267)	abhd2a (ENSSLDG00000010303)	rlbp1a (ENSSLDG00000010365)	slc39a1 (ENSSLDG00000010382)	tmem208 (ENSSLDG00000010399)	smad6a (ENSSLDG00000010424)	SMAD3 (ENSSLDG00000010443)	map2k5 (ENSSLDG00000010494)
Eupercaria	ANCESTRAL SPECIES	14	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Fugu	MODERN SPECIES	4	lysmd2 (ENSTRUG00000027474)	scg3 (ENSTRUG00000016996)	tnfaip8l3 (ENSTRUG00000021521)	cyp19a1a (ENSTRUG00000016986)	gldn (ENSTRUG00000016983)	dmxl2 (ENSTRUG00000028421)	sema6dl (ENSTRUG00000016974)	ENSTRUG00000016973	CTXN2 (ENSTRUG00000016965)	SLC12A1 (ENSTRUG00000016959)	dut (ENSTRUG00000016958)	ENSTRUG00000026120	SECISBP2L (ENSTRUG00000016925)	cops2 (ENSTRUG00000016921)	fgf7 (ENSTRUG00000021359)	dtwd1 (ENSTRUG00000016918) ##22	ENSTRUG00000016911	spata5l1 (ENSTRUG00000016910)	zgc:153317 (ENSTRUG00000016908)	slc30a4 (ENSTRUG00000019868)	bloc1s6 (ENSTRUG00000021749)	mibp2 (ENSTRUG00000016897)	HAPLN3 (ENSTRUG00000016895)	mfge8a (ENSTRUG00000016888)	smad6a (ENSTRUG00000032173)	abhd2a (ENSTRUG00000016883)	rlbp1a (ENSTRUG00000016880)	slc39a1 (ENSTRUG00000016874)	tmem208 (ENSTRUG00000026186)	tmem208 (ENSTRUG00000016873)	ENSTRUG00000029807
Tetraodon	MODERN SPECIES	20	tnfaip8l3 (ENSTNIG00000009519)	cyp19a1a (ENSTNIG00000009520)	gldn (ENSTNIG00000009521)	dmxl2 (ENSTNIG00000009522)	sema6dl (ENSTNIG00000009523)	ENSTNIG00000009524	slc24a5 (ENSTNIG00000009525)	myef2 (ENSTNIG00000009526)	CTXN2 (ENSTNIG00000009527)	SLC12A1 (ENSTNIG00000009528)	dut (ENSTNIG00000009529)	FBN1 (ENSTNIG00000009530)	SECISBP2L (ENSTNIG00000009531)	cops2 (ENSTNIG00000009532)	FGF7 (ENSTNIG00000009533)	dtwd1 (ENSTNIG00000009534) ##22	ENSTNIG00000009535	spata5l1 (ENSTNIG00000009536)	slc30a4 (ENSTNIG00000009537)	bloc1s6 (ENSTNIG00000009538)	mibp2 (ENSTNIG00000009539)	HAPLN3 (ENSTNIG00000009540)	mfge8a (ENSTNIG00000009541)	abhd2a (ENSTNIG00000009542)	rlbp1a (ENSTNIG00000009543)	slc39a1 (ENSTNIG00000009544)	smad6a (ENSTNIG00000009545)	SMAD3 (ENSTNIG00000009546)	map2k5 (ENSTNIG00000009547)	skor1a (ENSTNIG00000009548)	PIAS1 (ENSTNIG00000009549)
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Ballan wrasse	MODERN SPECIES	159	tnfaip8l3 (ENSLBEG00000006432)	cyp19a1a (ENSLBEG00000006386)	gldn (ENSLBEG00000006349)	dmxl2 (ENSLBEG00000006165)	sema6dl (ENSLBEG00000005855)	ENSLBEG00000005745	slc24a5 (ENSLBEG00000005706)	myef2 (ENSLBEG00000005649)	CTXN2 (ENSLBEG00000005630)	SLC12A1 (ENSLBEG00000005486)	dut (ENSLBEG00000005451)	FBN1 (ENSLBEG00000005272)	SECISBP2L (ENSLBEG00000005166)	cops2 (ENSLBEG00000005131)	fgf7 (ENSLBEG00000005113)	dtwd1 (ENSLBEG00000005091) ##22	ENSLBEG00000005028	spata5l1 (ENSLBEG00000004977)	zgc:153317 (ENSLBEG00000004952)	slc30a4 (ENSLBEG00000004880)	bloc1s6 (ENSLBEG00000004844)	mibp2 (ENSLBEG00000004795)	mfge8a (ENSLBEG00000004765)	abhd2a (ENSLBEG00000004705)	ENSLBEG00000004646	glceb (ENSLBEG00000004620)	paqr5a (ENSLBEG00000004443)	kif23 (ENSLBEG00000004189)	TLE3 (ENSLBEG00000003967)	UACA (ENSLBEG00000003800)	ENSLBEG00000003668
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00940000178310	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
European seabass	MODERN SPECIES	18	gldn (ENSDLAG00005028372)	dmxl2 (ENSDLAG00005024523)	sema6dl (ENSDLAG00005025180)	ENSDLAG00005030847	slc24a5 (ENSDLAG00005025246)	myef2 (ENSDLAG00005025264)	CTXN2 (ENSDLAG00005008496)	SLC12A1 (ENSDLAG00005008560)	dut (ENSDLAG00005010901)	FBN1 (ENSDLAG00005010949)	ENSDLAG00005011676	ENSDLAG00005011681	SECISBP2L (ENSDLAG00005011688)	COPS2 (ENSDLAG00005011741)	FGF7 (ENSDLAG00005011794)	dtwd1 (ENSDLAG00005011800) ##22	spata5l1 (ENSDLAG00005012044)	zgc:153317 (ENSDLAG00005012056)	ENSDLAG00005011812	bloc1s6 (ENSDLAG00005029813)	mibp2 (ENSDLAG00005012080)	HAPLN3 (ENSDLAG00005012094)	MFGE8 (ENSDLAG00005012122)	abhd2a (ENSDLAG00005012210)	ENSDLAG00005032428	slc39a1 (ENSDLAG00005012303)	ENSDLAG00005028664	smad6a (ENSDLAG00005012334)	ENSDLAG00005012347	map2k5 (ENSDLAG00005012424)	skor1a (ENSDLAG00005012682)
Large yellow croaker	MODERN SPECIES	480	cyp19a1a (ENSLCRG00005016193)	gldn (ENSLCRG00005016234)	dmxl2 (ENSLCRG00005016306)	sema6dl (ENSLCRG00005021111)	ENSLCRG00005021137	slc24a5 (ENSLCRG00005021139)	myef2 (ENSLCRG00005021141)	CTXN2 (ENSLCRG00005021145)	SLC12A1 (ENSLCRG00005021185)	dut (ENSLCRG00005022045)	FBN1 (ENSLCRG00005022093)	ENSLCRG00005022695	SECISBP2L (ENSLCRG00005000245)	cops2 (ENSLCRG00005000332)	fgf7 (ENSLCRG00005000389)	dtwd1 (ENSLCRG00005000391) ##22	ENSLCRG00005000460	spata5l1 (ENSLCRG00005005473)	zgc:153317 (ENSLCRG00005005477)	slc30a4 (ENSLCRG00005005479)	bloc1s6 (ENSLCRG00005005480)	mibp2 (ENSLCRG00005005482)	HAPLN3 (ENSLCRG00005005483)	mfge8a (ENSLCRG00005005484)	abhd2a (ENSLCRG00005005487)	ENSLCRG00005005803	slc39a1 (ENSLCRG00005005804)	tmem208 (ENSLCRG00005005805)	smad6a (ENSLCRG00005005807)	SMAD3 (ENSLCRG00005005810)	map2k5 (ENSLCRG00005005909)
Gilthead seabream	MODERN SPECIES	18	gldn (ENSSAUG00010022349)	dmxl2 (ENSSAUG00010022332)	sema6dl (ENSSAUG00010022220)	ENSSAUG00010022214	slc24a5 (ENSSAUG00010022209)	myef2 (ENSSAUG00010022203)	slc24a5 (ENSSAUG00010022199)	myef2 (ENSSAUG00010022195)	CTXN2 (ENSSAUG00010022191)	SLC12A1 (ENSSAUG00010014810)	FBN1 (ENSSAUG00010003510)	ENSSAUG00010003255	SECISBP2L (ENSSAUG00010002561)	cops2 (ENSSAUG00010002547)	fgf7 (ENSSAUG00010002544)	dtwd1 (ENSSAUG00010002543) ##22	ENSSAUG00010002030	spata5l1 (ENSSAUG00010001992)	zgc:153317 (ENSSAUG00010001990)	slc30a4 (ENSSAUG00010001988)	bloc1s6 (ENSSAUG00010001982)	mibp2 (ENSSAUG00010001974)	HAPLN3 (ENSSAUG00010001971)	mfge8a (ENSSAUG00010001355)	rlbp1a (ENSSAUG00010001297)	abhd2a (ENSSAUG00010001289)	ENSSAUG00010001286	slc39a1 (ENSSAUG00010001284)	tmem208 (ENSSAUG00010001282)	smad6a (ENSSAUG00010001276)	SMAD3 (ENSSAUG00010001244)
Perciformes	ANCESTRAL SPECIES	15	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Cottioidei	ANCESTRAL SPECIES	13	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Lumpfish	MODERN SPECIES	18	gldn (ENSCLMG00005019455)	dmxl2 (ENSCLMG00005019473)	sema6dl (ENSCLMG00005019924)	ENSCLMG00005020005	slc24a5 (ENSCLMG00005020006)	myef2 (ENSCLMG00005020007)	CTXN2 (ENSCLMG00005020010)	SLC12A1 (ENSCLMG00005020013)	dut (ENSCLMG00005020017)	FBN1 (ENSCLMG00005020037)	ENSCLMG00005020320	ENSCLMG00005020321	SECISBP2L (ENSCLMG00005020323)	cops2 (ENSCLMG00005020324)	fgf7 (ENSCLMG00005020325)	dtwd1 (ENSCLMG00005020326) ##22	ENSCLMG00005020328	spata5l1 (ENSCLMG00005020375)	zgc:153317 (ENSCLMG00005020377)	slc30a4 (ENSCLMG00005020379)	bloc1s6 (ENSCLMG00005020380)	mibp2 (ENSCLMG00005020381)	HAPLN3 (ENSCLMG00005020382)	MFGE8 (ENSCLMG00005020383)	abhd2a (ENSCLMG00005020764)	rlbp1a (ENSCLMG00005020766)	slc39a1 (ENSCLMG00005020767)	tmem208 (ENSCLMG00005020768)	smad6a (ENSCLMG00005020770)	SMAD3 (ENSCLMG00005020772)	map2k5 (ENSCLMG00005020775)
Stickleback	MODERN SPECIES	1	cnep1r1 (ENSGACG00000016737)	tnfaip8l3 (ENSGACG00000016741)	cyp19a1a (ENSGACG00000016742)	gldn (ENSGACG00000016746)	dmxl2 (ENSGACG00000016748)	slc24a5 (ENSGACG00000016752)	myef2 (ENSGACG00000016759)	CTXN2 (ENSGACG00000016764)	SLC12A1 (ENSGACG00000016765)	dut (ENSGACG00000016770)	FBN1 (ENSGACG00000016773)	ENSGACG00000016784	SECISBP2L (ENSGACG00000016786)	cops2 (ENSGACG00000016790)	fgf7 (ENSGACG00000016807)	dtwd1 (ENSGACG00000016809) ##22	ENSGACG00000016813	spata5l1 (ENSGACG00000016834)	slc30a4 (ENSGACG00000016836)	bloc1s6 (ENSGACG00000016843)	mibp2 (ENSGACG00000016845)	HAPLN3 (ENSGACG00000016853)	mfge8a (ENSGACG00000016860)	abhd2a (ENSGACG00000016866)	rlbp1a (ENSGACG00000016871)	ENSGACG00000016872	slc39a1 (ENSGACG00000016873)	tmem208 (ENSGACG00000016875)	smad6a (ENSGACG00000016878)	SMAD3 (ENSGACG00000016882)	map2k5 (ENSGACG00000016884)
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT00840000129915.b	ENSGT00940000158020.d	ENSGT00390000000096.b.a	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00950000182870.b.a	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00940000159843	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00390000009277	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842.qc	ENSGT00940000159628.c	ENSGT00940000156049.b	ENSGT00950000182902.b.a.d.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00390000008139	ENSGT00940000158146.a	ENSGT00940000153499.b.b.d.a.a	ENSGT00940000157505
Pike perch	MODERN SPECIES	20	cyp19a1a (ENSSLUG00000025475)	gldn (ENSSLUG00000025470)	dmxl2 (ENSSLUG00000025439)	sema6dl (ENSSLUG00000025355)	ENSSLUG00000025336	slc24a5 (ENSSLUG00000025332)	myef2 (ENSSLUG00000025326)	CTXN2 (ENSSLUG00000025319)	SLC12A1 (ENSSLUG00000025019)	dut (ENSSLUG00000024897)	FBN1 (ENSSLUG00000022830)	ENSSLUG00000022210	SECISBP2L (ENSSLUG00000022171)	cops2 (ENSSLUG00000022151)	fgf7 (ENSSLUG00000022137)	dtwd1 (ENSSLUG00000022130) ##22	ENSSLUG00000021662	spata5l1 (ENSSLUG00000021606)	zgc:153317 (ENSSLUG00000021600)	slc30a4 (ENSSLUG00000021593)	bloc1s6 (ENSSLUG00000021586)	mibp2 (ENSSLUG00000021575)	ift46 (ENSSLUG00000021569)	podxl (ENSSLUG00000021557)	mkln1 (ENSSLUG00000021503)	net1 (ENSSLUG00000021405)	asb13a.2 (ENSSLUG00000021385)	ENSSLUG00000021379	gdi2 (ENSSLUG00000021353)	ankrd16 (ENSSLUG00000021333)	glt8d2 (ENSSLUG00000021331)
Channel bull blenny	MODERN SPECIES	17	cyp19a1a (ENSCGOG00000017219)	gldn (ENSCGOG00000017158)	dmxl2 (ENSCGOG00000016075)	sema6dl (ENSCGOG00000014318)	ENSCGOG00000014294	slc24a5 (ENSCGOG00000014290)	myef2 (ENSCGOG00000014246)	CTXN2 (ENSCGOG00000014243)	SLC12A1 (ENSCGOG00000014132)	dut (ENSCGOG00000014130)	FBN1 (ENSCGOG00000013683)	ENSCGOG00000013642	SECISBP2L (ENSCGOG00000013639)	cops2 (ENSCGOG00000013394)	fgf7 (ENSCGOG00000013386)	dtwd1 (ENSCGOG00000013385) ##22	ENSCGOG00000012050	spata5l1 (ENSCGOG00000012018)	zgc:153317 (ENSCGOG00000012017)	slc30a4 (ENSCGOG00000011952)	bloc1s6 (ENSCGOG00000011946)	mibp2 (ENSCGOG00000011896)	HAPLN3 (ENSCGOG00000011875)	mfge8a (ENSCGOG00000011837)	abhd2a (ENSCGOG00000011430)	rlbp1a (ENSCGOG00000011827)	slc39a1 (ENSCGOG00000011417)	tmem208 (ENSCGOG00000011411)	smad6a (ENSCGOG00000011407)	SMAD3 (ENSCGOG00000011028)	map2k5 (ENSCGOG00000011019)
Pinecone sodierfish	MODERN SPECIES	17	gldn (ENSMMDG00005009413)	dmxl2 (ENSMMDG00005009418)	sema6dl (ENSMMDG00005009426)	ENSMMDG00005009431	slc24a5 (ENSMMDG00005009433)	myef2 (ENSMMDG00005009439)	CTXN2 (ENSMMDG00005009444)	SLC12A1 (ENSMMDG00005009457)	dut (ENSMMDG00005009548)	FBN1 (ENSMMDG00005009577)	ENSMMDG00005009880	SECISBP2L (ENSMMDG00005009891)	cops2 (ENSMMDG00005009909)	ENSMMDG00005009917	fgf7 (ENSMMDG00005009919)	dtwd1 (ENSMMDG00005009923) ##22	ENSMMDG00005009953	spata5l1 (ENSMMDG00005011971)	zgc:153317 (ENSMMDG00005011975)	slc30a4 (ENSMMDG00005011976)	bloc1s6 (ENSMMDG00005011978)	mibp2 (ENSMMDG00005011979)	HAPLN3 (ENSMMDG00005011980)	mfge8a (ENSMMDG00005011993)	abhd2a (ENSMMDG00005012688)	ENSMMDG00005012693	slc39a1 (ENSMMDG00005012694)	nsmce1 (ENSMMDG00005012696)	ENSMMDG00005002736	ENSMMDG00005002770	irf1a (ENSMMDG00005002783)
Cod	MODERN SPECIES	5	ENSGMOG00000025098	ENSGMOG00000016105	GOLM2 (ENSGMOG00000029962)	ENSGMOG00000016052	ENSGMOG00000031814	eif3jb (ENSGMOG00000016027)	cilp (ENSGMOG00000016017)	ENSGMOG00000032103	ENSGMOG00000002628	ENSGMOG00000033882	ENSGMOG00000002703	ENSGMOG00000014610	SECISBP2L (ENSGMOG00000014876)	COPS2 (ENSGMOG00000014935)	fgf7 (ENSGMOG00000032776)	dtwd1 (ENSGMOG00000014979) ##22	ENSGMOG00000015005	spata5l1 (ENSGMOG00000015056)	slc30a4 (ENSGMOG00000015081)	ENSGMOG00000029681	bloc1s6 (ENSGMOG00000015099)	mibp2 (ENSGMOG00000015115)	HAPLN3 (ENSGMOG00000015131)	MFGE8 (ENSGMOG00000015146)	ABHD2 (ENSGMOG00000015170)	ENSGMOG00000015191	scg3 (ENSGMOG00000009829)	lysmd2 (ENSGMOG00000024202)	tmod2 (ENSGMOG00000008676)	leo1 (ENSGMOG00000008688)	ENSGMOG00000012520
Protacanthopterygii	ANCESTRAL SPECIES	2	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b	ENSGT00940000157397	ENSGT00940000154412.B.b	ENSGT00940000158030	ENSGT00390000018390	ENSGT00950000183158.D.b.f.qb	ENSGT00490000043356.a	ENSGT00530000063301.a.b.g	ENSGT00940000159843	ENSGT00940000169841	ENSGT00990000205468	ENSGT00940000153766.B ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT01090000260003.a.b.b.a.a.a.b.a	ENSGT01000000214413.a.v	ENSGT00940000155347.a.b	ENSGT00940000154555.e.a	ENSGT00940000157573.n.b	ENSGT00950000183103.c	ENSGT00940000155174.f	ENSGT00940000160227.h
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1	ENSGT00940000158020.d.h	ENSGT00840000129915.b.f	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b.q	ENSGT00940000157397.g	ENSGT00940000154412.B.b.f	ENSGT00940000158030.q	ENSGT00390000018390.t.a	ENSGT00950000183158.D.b.f.qb.n	ENSGT00490000043356.a.l	ENSGT00530000063301.a.b.g.a.b	ENSGT00490000043356.a.k.a	ENSGT00530000063301.a.b.g.b	ENSGT00940000159843.c	ENSGT00940000153766.B.m ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000158245.hc.a	ENSGT00940000157722	ENSGT00940000157091.u.b	ENSGT01090000260003.a.b.b.a.a.a.b.a.j.a	ENSGT00940000157091.v	ENSGT01090000260003.a.b.b.a.a.a.b.a.j.b	ENSGT01000000214413.a.v	ENSGT00940000155347.a.b	ENSGT00940000154555.e.a.e	ENSGT00940000157573.n.b
Huchen	MODERN SPECIES	2892														fgf7 (ENSHHUG00000037998)	ENSHHUG00000038013	dtwd1 (ENSHHUG00000038024) ##22	ENSHHUG00000038030	ENSHHUG00000038041	spata5l1 (ENSHHUG00000038126)	slc30a4 (ENSHHUG00000038139)
Salmoninae_a	ANCESTRAL SPECIES	105	ENSGT00940000158020.d.h	ENSGT00840000129915.b.f	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b.q	ENSGT00940000157397.g	ENSGT00940000154412.B.b.f	ENSGT00940000158030.q	ENSGT00390000018390.t.a	ENSGT00950000183158.D.b.f.qb.n	ENSGT00490000043356.a.l	ENSGT00490000043356.a.k.a	ENSGT00530000063301.a.b.g.b	ENSGT00940000159843.c	ENSGT00940000169841	ENSGT00940000153766.B.m ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000158245.hc.a	ENSGT00940000157722	ENSGT00940000157091.u.b.c	ENSGT01090000260003.a.b.b.a.a.a.b.a.j.a	ENSGT00940000157091.u.a	ENSGT01090000260003.a.b.b.a.a.a.b.a.i	ENSGT01000000214413.a.v	ENSGT00940000155347.a.b	ENSGT00940000157573.n.b	ENSGT00950000183103.c
Oncorhynchus	DUPLICATION
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000153766.B.m.a.a ##22
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000038580	ENSOMYG00000067610	slc24a5 (ENSOMYG00000072662)	myef2 (ENSOMYG00000031985)	CTXN2 (ENSOMYG00000048892)	SLC12A1 (ENSOMYG00000049253)	DUT (ENSOMYG00000065011)	ENSOMYG00000052326	FBN1 (ENSOMYG00000050997)	SECISBP2L (ENSOMYG00000031797)	ENSOMYG00000076780	ENSOMYG00000049579	fgf7 (ENSOMYG00000031212)	ENSOMYG00000070891	ENSOMYG00000062046	dtwd1 (ENSOMYG00000061840) ##22	ENSOMYG00000063981	spata5l1 (ENSOMYG00000031657)	slc30a4 (ENSOMYG00000028449)	bloc1s6 (ENSOMYG00000037009)	nrk2 (ENSOMYG00000013150)	ENSOMYG00000047607	ENSOMYG00000047605	ENSOMYG00000047335	bcl2l10 (ENSOMYG00000047083)	gnb5b (ENSOMYG00000047078)	MYO5A (ENSOMYG00000069835)	ATOSA (ENSOMYG00000027533)	ENSOMYG00000059074	onecut1 (ENSOMYG00000049368)	ENSOMYG00000047066
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00940000153766.B.m.a.a ##22
Chinook salmon	MODERN SPECIES	3	aldh1a3 (ENSOTSG00005013455)	asb7 (ENSOTSG00005013453)	ENSOTSG00005013451	ENSOTSG00005013448	PPIP5K1 (ENSOTSG00005012992)	ENSOTSG00005012990	HAPLN3 (ENSOTSG00005012989)	mfge8a (ENSOTSG00005012988)	ABHD2 (ENSOTSG00005012987)	ENSOTSG00005021952	CTXN2 (ENSOTSG00005021951)	ENSOTSG00005021948	ENSOTSG00005021943	fgf7 (ENSOTSG00005021939)	ENSOTSG00005021938	dtwd1 (ENSOTSG00005021937) ##22	gli1 (ENSOTSG00005021454)	lpcat2 (ENSOTSG00005021076)	mmp2 (ENSOTSG00005017318)	lpcat2 (ENSOTSG00005017132)	IRX5 (ENSOTSG00005017129)	irx5a (ENSOTSG00005017128)	ENSOTSG00005017106	ENSOTSG00005017104	sall1a (ENSOTSG00005017101)	CYLD (ENSOTSG00005015232)	ENSOTSG00005015225	ENSOTSG00005015223	ENSOTSG00005015219	ENSOTSG00005015217	TOX3 (ENSOTSG00005015216)
Oncorhynchus	ANCESTRAL SPECIES	666															ENSGT00990000205468	ENSGT00940000153766.B.m.a.b ##22
Rainbow trout	MODERN SPECIES	18	SEMA6D (ENSOMYG00000070231)	ENSOMYG00000032022	slc24a5 (ENSOMYG00000057957)	myef2 (ENSOMYG00000032006)	CTXN2 (ENSOMYG00000031963)	SLC12A1 (ENSOMYG00000031934)	ENSOMYG00000077143	DUT (ENSOMYG00000031884)	FBN1 (ENSOMYG00000047950)	SECISBP2L (ENSOMYG00000031805)	ENSOMYG00000031735	ENSOMYG00000053760	ENSOMYG00000077693	fgf7 (ENSOMYG00000031674)	ENSOMYG00000063443	dtwd1 (ENSOMYG00000031640) ##22	ENSOMYG00000029505	spata5l1 (ENSOMYG00000031610)	slc30a4 (ENSOMYG00000036982)	pldn (ENSOMYG00000028802)	ENSOMYG00000036784	mibp2 (ENSOMYG00000047608)	ENSOMYG00000051551	ENSOMYG00000013119	ENSOMYG00000047618	ENSOMYG00000058045	bcl2l10 (ENSOMYG00000060575)	gnb5b (ENSOMYG00000067687)	ENSOMYG00000056148	MYO5A (ENSOMYG00000028055)	ATOSA (ENSOMYG00000027656)
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00950000182902.b.a.d.b.b.a.b.b	ENSGT00940000160054.k.b	ENSGT00940000159303	ENSGT00940000158347.z	ENSGT01030000234532.A.b.q.a.a	ENSGT00940000157397.g	ENSGT00940000154412.B.b.f	ENSGT00940000158030.q	ENSGT00390000018390.t.a	ENSGT00950000183158.D.b.f.qb.n	ENSGT00490000043356.a.k.b	ENSGT00490000043356.a.k.a	ENSGT00530000063301.a.b.g.b	ENSGT00940000159843.c	ENSGT00940000169841	ENSGT00940000153766.B.m.b ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000158245.hc.a.a	ENSGT00940000157722	ENSGT00940000157091.u.b.c	ENSGT01090000260003.a.b.b.a.a.a.b.a.i	ENSGT01000000214413.a.v.e	ENSGT00940000155347.a.b	ENSGT00940000157573.n.b	ENSGT00950000183103.c.c	ENSGT00940000160227.h.f	ENSGT00510000048144.l.a
Oncorhynchus_a	ANCESTRAL SPECIES	134												ENSGT00490000043356.a.k.a.a	ENSGT00530000063301.a.b.g.b	ENSGT00940000159843.c	ENSGT00940000169841	ENSGT00940000153766.B.m.b ##22	ENSGT00390000004624.a.b	ENSGT00940000160700	ENSGT00940000157545	ENSGT00510000047812	ENSGT00940000159842	ENSGT00940000158245.hc.a.a	ENSGT00940000157722	ENSGT00940000157091.u.b.d	ENSGT01090000260003.a.b.b.a.a.a.b.a.i	ENSGT01000000214413.a.v.e	ENSGT00940000155347.a.b	ENSGT00940000157573.n.b	ENSGT00950000183103.c.c	ENSGT00940000160227.h.f	ENSGT01080000257338.C.b.a.a.d.a.a.a.b.b.b
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	28															ENSOKIG00005025653	dtwd1 (ENSOKIG00005025645) ##22	ENSOKIG00005024428	spata5l1 (ENSOKIG00005024371)	slc30a4 (ENSOKIG00005024363)	bloc1s6 (ENSOKIG00005024318)	mibp2 (ENSOKIG00005024279)	ENSOKIG00005024270	ENSOKIG00005024133	ENSOKIG00005024099	ENSOKIG00005024089	trpm7 (ENSOKIG00005023597)	bcl2l10 (ENSOKIG00005023553)	gnb5b (ENSOKIG00005023510)	MYO5A (ENSOKIG00005010641)	ATOSA (ENSOKIG00005010106)	onecut1 (ENSOKIG00005010094)
Coho salmon	MODERN SPECIES	636														fgf7 (ENSOKIG00005041085)	ENSOKIG00005041072	DTWD1 (ENSOKIG00005041059) ##22	ENSOKIG00005037528
Salmo	ANCESTRAL SPECIES	27														ENSGT00530000063301.a.b.g.a.b	ENSGT00940000159843.c.a	ENSGT00940000153766.B.m ##22	ENSGT00390000004624.a.b.e	ENSGT00940000160700.j	ENSGT00940000157545.h	ENSGT00510000047812	ENSGT00940000159842.mc	ENSGT00940000158245.hc.b	ENSGT00940000157722.k	ENSGT00940000157091.u.b.c	ENSGT01090000260003.a.b.b.a.a.a.b.a.j.a	ENSGT00940000155347.a.b.o	ENSGT00950000183103.c.e	ENSGT00940000155174.f.b	ENSGT00940000160227.h	ENSGT00510000048144.l	ENSGT00940000156346.c.a.b
River trout	MODERN SPECIES	21	ENSSTUG00000019022	dmxl2 (ENSSTUG00000019091)	gldn (ENSSTUG00000020020)	cyp19a1a (ENSSTUG00000020100)	DUT (ENSSTUG00000021139)	SLC12A1 (ENSSTUG00000021248)	CTXN2 (ENSSTUG00000024037)	myef2 (ENSSTUG00000024046)	slc24a5 (ENSSTUG00000024096)	ENSSTUG00000024113	sema6dl (ENSSTUG00000024170)	ENSSTUG00000026582	SECISBP2L (ENSSTUG00000026590)	ENSSTUG00000026603	fgf7 (ENSSTUG00000026628)	dtwd1 (ENSSTUG00000026633) ##22	ENSSTUG00000026701	spata5l1 (ENSSTUG00000030001)	slc30a4 (ENSSTUG00000030012)	bloc1s6 (ENSSTUG00000030029)	mibp2 (ENSSTUG00000030109)	ENSSTUG00000030140	ENSSTUG00000030165	trpm7 (ENSSTUG00000030411)	bcl2l10 (ENSSTUG00000034876)	gnb5b (ENSSTUG00000034890)	MYO5A (ENSSTUG00000035119)	atosa (ENSSTUG00000045389)	onecut1 (ENSSTUG00000045397)	UNC13C (ENSSTUG00000045415)	wdr76 (ENSSTUG00000046046)
Atlantic salmon	MODERN SPECIES	18	dmxl2 (ENSSSAG00000056088)	ENSSSAG00000089327	cyp19a1a (ENSSSAG00000054809)	ENSSSAG00000097760	SEMA6D (ENSSSAG00000052316)	ENSSSAG00000115789	slc24a5 (ENSSSAG00000117875)	myef2 (ENSSSAG00000073691)	SLC12A1 (ENSSSAG00000089202)	DUT (ENSSSAG00000092159)	FBN1 (ENSSSAG00000095019)	SECISBP2L (ENSSSAG00000069729)	ENSSSAG00000115857	ENSSSAG00000052046	fgf7 (ENSSSAG00000077238)	dtwd1 (ENSSSAG00000075906) ##22	ENSSSAG00000069620	spata5l1 (ENSSSAG00000078447)	slc30a4 (ENSSSAG00000078683)	PLDN (ENSSSAG00000078694)	NRK2 (ENSSSAG00000077245)	ENSSSAG00000117324	ENSSSAG00000009059	ENSSSAG00000091602	bcl2l10 (ENSSSAG00000121756)	gnb5b (ENSSSAG00000078401)	ENSSSAG00000107613	MYO5A (ENSSSAG00000077301)	ATOSA (ENSSSAG00000102273)	onecut1 (ENSSSAG00000122249)	ENSSSAG00000069807
Salmoninae	ANCESTRAL SPECIES	1910															ENSGT00990000205468	ENSGT00940000153766.B.n ##22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000153766.B.n ##22
Salmo	ANCESTRAL SPECIES	186				ENSGT00940000159303.i	ENSGT00940000158347.z.h	ENSGT01030000234532.A.b.r	ENSGT00940000157397.g	ENSGT00940000154412.B.b.f	ENSGT00940000158030.r	ENSGT00390000018390.t.a	ENSGT00950000183158.D.b.f.qb.n	ENSGT00490000043356.a.l	ENSGT00530000063301.a.b.g.b	ENSGT00940000159843.c.b	ENSGT00940000169841	ENSGT00940000153766.B.n ##22	ENSGT00390000004624.a.b.f	ENSGT00940000160700.i	ENSGT00940000157545.g
Atlantic salmon	MODERN SPECIES	2	dmxl2 (ENSSSAG00000065223)	ENSSSAG00000065917	cyp19a1a (ENSSSAG00000066039)	SEMA6D (ENSSSAG00000071415)	ENSSSAG00000097257	slc24a5 (ENSSSAG00000073682)	myef2 (ENSSSAG00000042243)	SLC12A1 (ENSSSAG00000073833)	DUT (ENSSSAG00000039278)	ENSSSAG00000105662	FBN1 (ENSSSAG00000097601)	SECISBP2L (ENSSSAG00000085669)	ENSSSAG00000102496	fgf7 (ENSSSAG00000098474)	ENSSSAG00000069596	dtwd1 (ENSSSAG00000117386) ##22	ENSSSAG00000040214	spata5l1 (ENSSSAG00000042160)	znt4 (ENSSSAG00000042168)	bloc1s6 (ENSSSAG00000069691)	nrk2 (ENSSSAG00000068654)	ENSSSAG00000117684	ENSSSAG00000042216	ENSSSAG00000092430	ENSSSAG00000077255	nr13 (ENSSSAG00000038390)	gnb5b (ENSSSAG00000104044)	MYO5A (ENSSSAG00000117716)	ENSSSAG00000039611	ENSSSAG00000104349	ENSSSAG00000084792
River trout	MODERN SPECIES	3	cyp19a1a (ENSSTUG00000030814)	ENSSTUG00000030807	ENSSTUG00000030795	sema6dl (ENSSTUG00000027323)	ENSSTUG00000027237	slc24a5 (ENSSTUG00000027206)	myef2 (ENSSTUG00000027192)	SLC12A1 (ENSSTUG00000021944)	DUT (ENSSTUG00000021744)	ENSSTUG00000021713	ENSSTUG00000021690	ENSSTUG00000021672	ENSSTUG00000021663	fgf7 (ENSSTUG00000021634)	ENSSTUG00000021611	dtwd1 (ENSSTUG00000021601) ##22	ENSSTUG00000017843	spata5l1 (ENSSTUG00000017693)	slc30a4 (ENSSTUG00000017678)	bloc1s6 (ENSSTUG00000017665)	mibp2 (ENSSTUG00000017643)	ENSSTUG00000017633	ENSSTUG00000017404	trpm7 (ENSSTUG00000011875)	ENSSTUG00000011709	bcl2l10 (ENSSTUG00000011687)	gnb5b (ENSSTUG00000011603)	ENSSTUG00000011593	MYO5A (ENSSTUG00000008291)	atosa (ENSSTUG00000008204)	onecut1 (ENSSTUG00000008200)
Huchen	MODERN SPECIES	583						dmxl2 (ENSHHUG00000024951)	ENSHHUG00000024943	ENSHHUG00000024929	tnfaip8l3 (ENSHHUG00000024922)	ENSHHUG00000024920	ENSHHUG00000024844	SECISBP2L (ENSHHUG00000024819)	ENSHHUG00000024793	fgf7 (ENSHHUG00000024778)	ENSHHUG00000024765	dtwd1 (ENSHHUG00000024757) ##22	ENSHHUG00000024701	spata5l1 (ENSHHUG00000024693)	ENSHHUG00000024634	slc30a4 (ENSHHUG00000024633)	bloc1s6 (ENSHHUG00000024577)	mibp2 (ENSHHUG00000024512)	ENSHHUG00000024506	ENSHHUG00000024445	trpm7 (ENSHHUG00000023978)	bcl2l10 (ENSHHUG00000023972)	gnb5b (ENSHHUG00000023933)	MYO5A (ENSHHUG00000021849)	arpp19a (ENSHHUG00000021815)	atosa (ENSHHUG00000021793)
Northern pike	MODERN SPECIES	1	gldn (ENSELUG00000003550)	cyp19a1a (ENSELUG00000003585)	sema6dl (ENSELUG00000003644)	ENSELUG00000003669	slc24a5 (ENSELUG00000003686)	myef2 (ENSELUG00000003712)	SLC12A1 (ENSELUG00000003881)	dut (ENSELUG00000003934)	FBN1 (ENSELUG00000003982)	ENSELUG00000004011	SECISBP2L (ENSELUG00000004052)	ENSELUG00000004085	fgf7 (ENSELUG00000004097)	ENSELUG00000032323	ENSELUG00000029039	dtwd1 (ENSELUG00000004114) ##22	ENSELUG00000004175	spata5l1 (ENSELUG00000004241)	slc30a4 (ENSELUG00000004253)	bloc1s6 (ENSELUG00000004267)	mibp2 (ENSELUG00000001288)	ENSELUG00000004306	ENSELUG00000004367	trpm7 (ENSELUG00000004428)	trpm7 (ENSELUG00000004461)	bcl2l10 (ENSELUG00000004478)	gnb5b (ENSELUG00000004500)	MYO5A (ENSELUG00000004529)	atosa (ENSELUG00000004563)	onecut1 (ENSELUG00000004580)	UNC13C (ENSELUG00000004616)
Spotted gar	MODERN SPECIES	669	cyp19a1a (ENSLOCG00000013305)	gldn (ENSLOCG00000013299)	dmxl2 (ENSLOCG00000013273)	sema6dl (ENSLOCG00000013259)	slc24a5 (ENSLOCG00000013255)	myef2 (ENSLOCG00000013241)	SLC12A1 (ENSLOCG00000013230)	dut (ENSLOCG00000013224)	FBN1 (ENSLOCG00000013197)	SHC4 (ENSLOCG00000013189)	SECISBP2L (ENSLOCG00000013180)	cops2 (ENSLOCG00000013176)	galk2 (ENSLOCG00000013168)	fgf7 (ENSLOCG00000013162)	ENSLOCG00000013154	dtwd1 (ENSLOCG00000013150) ##22	ENSLOCG00000013143	ATP8B4 (ENSLOCG00000013128)	spata5l1 (ENSLOCG00000013121)	zgc:153317 (ENSLOCG00000013117)	slc30a4 (ENSLOCG00000013108)	bloc1s6 (ENSLOCG00000013103)	sqor (ENSLOCG00000013097)	mibp2 (ENSLOCG00000013090)	ENSLOCG00000013085	SPPL2A (ENSLOCG00000013070)	trpm7 (ENSLOCG00000013042)	ENSLOCG00000013040	USP8 (ENSLOCG00000013028)	gabpb1 (ENSLOCG00000013022)	hdc (ENSLOCG00000013010)
Reedfish	MODERN SPECIES	8	TYK2 (ENSECRG00000018110)	raver1 (ENSECRG00000018070)	nr5a5 (ENSECRG00000017711)	ENSECRG00000017476	ENSECRG00000017358	trip10a (ENSECRG00000017283)	SH2D3A (ENSECRG00000017240)	prmt1 (ENSECRG00000017184)	VAV1 (ENSECRG00000017128)	olfm2b (ENSECRG00000017093)	ENSECRG00000022401	ENSECRG00000022394	notch3 (ENSECRG00000022132)	galk2 (ENSECRG00000022025)	FGF7 (ENSECRG00000022020)	DTWD1 (ENSECRG00000022015) ##22	ENSECRG00000021989	ATP8B4 (ENSECRG00000021944)	spata5l1 (ENSECRG00000021927)	zgc:153317 (ENSECRG00000021922)	ENSECRG00000021916	slc30a4 (ENSECRG00000021911)	bloc1s6 (ENSECRG00000021900)	sqor (ENSECRG00000021889)	mibp2 (ENSECRG00000021880)	ENSECRG00000021869	SPPL2A (ENSECRG00000021827)	trpm7 (ENSECRG00000021761)	ENSECRG00000021733	USP50 (ENSECRG00000021721)	USP8 (ENSECRG00000021700)
Elephant shark	MODERN SPECIES	1490	adam10a (ENSCMIG00000019962)	MINDY2 (ENSCMIG00000019961)	sltm (ENSCMIG00000019960)	rnf111 (ENSCMIG00000019959)	ccnb2 (ENSCMIG00000019958)	MYO1E (ENSCMIG00000019954)	ENSCMIG00000019944	ENSCMIG00000019943	ENSCMIG00000019941	SHC4 (ENSCMIG00000019940)	SECISBP2L (ENSCMIG00000019938)	cops2 (ENSCMIG00000019936)	galk2 (ENSCMIG00000019932)	fgf7 (ENSCMIG00000019928)	ENSCMIG00000019927	DTWD1 (ENSCMIG00000019926) ##22	ENSCMIG00000019916	ATP8B4 (ENSCMIG00000019888)	WDR72 (ENSCMIG00000019874)	atosa (ENSCMIG00000019862)	MYO5A (ENSCMIG00000019635)	MYO5C (ENSCMIG00000019430)	gnb5b (ENSCMIG00000019360)	ENSCMIG00000019349	mapk6 (ENSCMIG00000019348)	leo1 (ENSCMIG00000019345)	tmod2 (ENSCMIG00000019339)	lysmd2 (ENSCMIG00000019338)	scg3 (ENSCMIG00000019335)	AP4E1 (ENSCMIG00000019329)	tnfaip8l3 (ENSCMIG00000019327)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000153766.B ##22
Lamprey	MODERN SPECIES	2562																dtwd1 (ENSPMAG00000007433) ##22
Hagfish	MODERN SPECIES	281								ENSEBUG00000007262	ENSEBUG00000006056	ENSEBUG00000013453	ENSEBUG00000013586	ENSEBUG00000004734	MRPS30 (ENSEBUG00000016559)	galk2 (ENSEBUG00000017079)	fgf10a (ENSEBUG00000013816)	dtwd1 (ENSEBUG00000008701) ##22	kti12 (ENSEBUG00000006006)	tars1 (ENSEBUG00000010935)	ENSEBUG00000011277	PARP6 (ENSEBUG00000005388)	ENSEBUG00000008474	ENSEBUG00000000917	ENSEBUG00000002466	ENSEBUG00000003123	BNC1 (ENSEBUG00000006950)	ENSEBUG00000013308	ENSEBUG00000016618	gjd6 (ENSEBUG00000003055)	ENSEBUG00000014226	ENSEBUG00000007180	ENSEBUG00000005966