Murinae	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a ##7	ENSGT00950000182898.a.a.a.a.b #8	ENSGT00490000044373 #9	ENSGT00940000158672 #10	ENSGT00940000157084 #11	ENSGT00390000001121 #12	ENSGT00860000135742 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Mus	ANCESTRAL SPECIES	16	ENSGT01020000230401.a.a.a.i.a.a ##7	ENSGT00950000182898.a.a.a.a.b #8	ENSGT00490000044373 #9	ENSGT00940000158672 #10	ENSGT00940000157084 #11	ENSGT00390000001121 #12	ENSGT00860000135742 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Shrew mouse	MODERN SPECIES	9	MGP_PahariEiJ_G0020640 #7	Slc29a1 (MGP_PahariEiJ_G0020641) #8	MGP_PahariEiJ_G0020642 #9	Capn11 (MGP_PahariEiJ_G0020643) #10	Tmem63b (MGP_PahariEiJ_G0020644) #11	Mrpl14 (MGP_PahariEiJ_G0020645) #12	1600014C23Rik (MGP_PahariEiJ_G0020646) #13	Vegfa (MGP_PahariEiJ_G0020647) #14	Mrps18a (MGP_PahariEiJ_G0020648) #15	Rsph9 (MGP_PahariEiJ_G0020649) #16	Mad2l1bp (MGP_PahariEiJ_G0020650) #17	Gtpbp2 (MGP_PahariEiJ_G0020651) #18	Polh (MGP_PahariEiJ_G0020652) #19	Xpo5 (MGP_PahariEiJ_G0020653) #20	Polr1c (MGP_PahariEiJ_G0020654) #21	Yipf3 (MGP_PahariEiJ_G0020655) #22	Lrrc73 (MGP_PahariEiJ_G0020656) #23	MGP_PahariEiJ_G0020657 #24	Dlk2 (MGP_PahariEiJ_G0020658) #25	Abcc10 (MGP_PahariEiJ_G0020659) #26	Zfp318 (MGP_PahariEiJ_G0020660) #27	MGP_PahariEiJ_G0020661 #28	Slc22a7 (MGP_PahariEiJ_G0020662) #29	Ttbk1 (MGP_PahariEiJ_G0020663) #30	Dnph1 (MGP_PahariEiJ_G0020664) #31	Cul9 (MGP_PahariEiJ_G0020665) #32	Srf (MGP_PahariEiJ_G0020666) #33	Ptk7 (MGP_PahariEiJ_G0020667) #34	Klc4 (MGP_PahariEiJ_G0020668) #35	Mrpl2 (MGP_PahariEiJ_G0020669) #36	Cul7 (MGP_PahariEiJ_G0020670) #37
Mus_A	ANCESTRAL SPECIES	10	ENSGT01020000230401.a.a.a.i.a.a ##7	ENSGT00950000182898.a.a.a.a.b #8	ENSGT00490000044373 #9	ENSGT00940000158672 #10	ENSGT00940000157084 #11	ENSGT00390000001121 #12	ENSGT00860000135742 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Mus_B	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a ##7	ENSGT00950000182898.a.a.a.a.b #8	ENSGT00490000044373 #9	ENSGT00940000158672 #10	ENSGT00940000157084 #11	ENSGT00390000001121 #12	ENSGT00860000135742 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Mus_C	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a ##7	ENSGT00950000182898.a.a.a.a.b #8	ENSGT00490000044373 #9	ENSGT00940000158672 #10	ENSGT00940000157084 #11	ENSGT00390000001121 #12	ENSGT00860000135742 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
spretus	MODERN SPECIES	8	Hsp90ab1 (MGP_SPRETEiJ_G0022560) ##7	Slc29a1 (MGP_SPRETEiJ_G0022561) #8	Mymx (MGP_SPRETEiJ_G0022562) #9	Capn11 (MGP_SPRETEiJ_G0022563) #10	Tmem63b (MGP_SPRETEiJ_G0022564) #11	Mrpl14 (MGP_SPRETEiJ_G0022565) #12	1600014C23Rik (MGP_SPRETEiJ_G0022566) #13	Vegfa (MGP_SPRETEiJ_G0022567) #14	Mrps18a (MGP_SPRETEiJ_G0022568) #15	Rsph9 (MGP_SPRETEiJ_G0022569) #16	Mad2l1bp (MGP_SPRETEiJ_G0022570) #17	Gtpbp2 (MGP_SPRETEiJ_G0022571) #18	Polh (MGP_SPRETEiJ_G0022572) #19	Xpo5 (MGP_SPRETEiJ_G0022573) #20	Polr1c (MGP_SPRETEiJ_G0022574) #21	Yipf3 (MGP_SPRETEiJ_G0022575) #22	Lrrc73 (MGP_SPRETEiJ_G0022576) #23	Tjap1 (MGP_SPRETEiJ_G0022577)	Dlk2 (MGP_SPRETEiJ_G0022578) #25	Abcc10 (MGP_SPRETEiJ_G0022579) #26	Zfp318 (MGP_SPRETEiJ_G0022580) #27	Crip3 (MGP_SPRETEiJ_G0022581) #28	Slc22a7 (MGP_SPRETEiJ_G0022582) #29	MGP_SPRETEiJ_G0022583	Ttbk1 (MGP_SPRETEiJ_G0022584) #30	Dnph1 (MGP_SPRETEiJ_G0022585) #31	Cul9 (MGP_SPRETEiJ_G0022586) #32	Srf (MGP_SPRETEiJ_G0022587) #33	Ptk7 (MGP_SPRETEiJ_G0022588) #34	Klc4 (MGP_SPRETEiJ_G0022589) #35	Mrpl2 (MGP_SPRETEiJ_G0022590) #36
Steppe mouse	MODERN SPECIES	2906							ENSMSIG00000012779 #13	Vegfa (ENSMSIG00000012606) #14	Mrps18a (ENSMSIG00000012569) #15	Rsph9 (ENSMSIG00000012557) #16	Mad2l1bp (ENSMSIG00000012546) #17	Gtpbp2 (ENSMSIG00000012510) #18	Polh (ENSMSIG00000012488) #19	Xpo5 (ENSMSIG00000012426) #20	Polr1c (ENSMSIG00000012395) #21	Yipf3 (ENSMSIG00000012375) #22	Lrrc73 (ENSMSIG00000012347) #23	Tjap1 (ENSMSIG00000012119)	Dlk2 (ENSMSIG00000012088) #25	Abcc10 (ENSMSIG00000011931) #26	Zfp318 (ENSMSIG00000011902) #27	Crip3 (ENSMSIG00000011845) #28	Slc22a7 (ENSMSIG00000011832) #29	Ttbk1 (ENSMSIG00000011787) #30	ENSMSIG00000011778 #31	Cul9 (ENSMSIG00000011560) #32	Srf (ENSMSIG00000011548) #33	Ptk7 (ENSMSIG00000011532) #34	Klc4 (ENSMSIG00000011494) #35	Mrpl2 (ENSMSIG00000011453) #36	Cul7 (ENSMSIG00000011412) #37
Mouse	MODERN SPECIES	8	Hsp90ab1 (ENSMUSG00000023944) ##7	Slc29a1 (ENSMUSG00000023942) #8	Mymx (ENSMUSG00000079471) #9	Capn11 (ENSMUSG00000058626) #10	Tmem63b (ENSMUSG00000036026) #11	Mrpl14 (ENSMUSG00000023939) #12	1600014C23Rik (ENSMUSG00000094690) #13	Vegfa (ENSMUSG00000023951) #14	Mrps18a (ENSMUSG00000023967) #15	Rsph9 (ENSMUSG00000023966) #16	Mad2l1bp (ENSMUSG00000034509) #17	Gtpbp2 (ENSMUSG00000023952) #18	Polh (ENSMUSG00000023953) #19	Xpo5 (ENSMUSG00000067150) #20	Polr1c (ENSMUSG00000067148) #21	Yipf3 (ENSMUSG00000071074) #22	Lrrc73 (ENSMUSG00000071073) #23	Tjap1 (ENSMUSG00000012296)	Dlk2 (ENSMUSG00000047428) #25	Abcc10 (ENSMUSG00000032842) #26	Zfp318 (ENSMUSG00000015597) #27	Crip3 (ENSMUSG00000023968) #28	Slc22a7 (ENSMUSG00000067144) #29	Ttbk1 (ENSMUSG00000015599) #30	Dnph1 (ENSMUSG00000040658) #31	Cul9 (ENSMUSG00000040327) #32	Srf (ENSMUSG00000015605) #33	Ptk7 (ENSMUSG00000023972) #34	Klc4 (ENSMUSG00000003546) #35	Mrpl2 (ENSMUSG00000002767) #36	Cul7 (ENSMUSG00000038545) #37
Ryukyu mouse	MODERN SPECIES	8	Hsp90ab1 (MGP_CAROLIEiJ_G0021648) ##7	Slc29a1 (MGP_CAROLIEiJ_G0021649) #8	MGP_CAROLIEiJ_G0021650 #9	Capn11 (MGP_CAROLIEiJ_G0021651) #10	Tmem63b (MGP_CAROLIEiJ_G0021652) #11	Mrpl14 (MGP_CAROLIEiJ_G0021653) #12	MGP_CAROLIEiJ_G0021654 #13	MGP_CAROLIEiJ_G0021655 #14	Mrps18a (MGP_CAROLIEiJ_G0021656) #15	Rsph9 (MGP_CAROLIEiJ_G0021657) #16	Mad2l1bp (MGP_CAROLIEiJ_G0021658) #17	Gtpbp2 (MGP_CAROLIEiJ_G0021659) #18	Polh (MGP_CAROLIEiJ_G0021660) #19	Xpo5 (MGP_CAROLIEiJ_G0021661) #20	Polr1c (MGP_CAROLIEiJ_G0021662) #21	Yipf3 (MGP_CAROLIEiJ_G0021663) #22	Lrrc73 (MGP_CAROLIEiJ_G0021664) #23	Tjap1 (MGP_CAROLIEiJ_G0021665)	Dlk2 (MGP_CAROLIEiJ_G0021666) #25	Abcc10 (MGP_CAROLIEiJ_G0021667) #26	Zfp318 (MGP_CAROLIEiJ_G0021668) #27	Crip3 (MGP_CAROLIEiJ_G0021669) #28	Slc22a7 (MGP_CAROLIEiJ_G0021670) #29	MGP_CAROLIEiJ_G0021671	Ttbk1 (MGP_CAROLIEiJ_G0021672) #30	Dnph1 (MGP_CAROLIEiJ_G0021673) #31	Cul9 (MGP_CAROLIEiJ_G0021674) #32	Srf (MGP_CAROLIEiJ_G0021675) #33	Ptk7 (MGP_CAROLIEiJ_G0021676) #34	Klc4 (MGP_CAROLIEiJ_G0021677) #35	Mrpl2 (MGP_CAROLIEiJ_G0021678) #36
Rat	MODERN SPECIES	19	Slc29a1 (ENSRNOG00000019752) #8	Mymx (ENSRNOG00000042497) #9	Capn11 (ENSRNOG00000026025) #10	Tmem63b (ENSRNOG00000019743) #11	Mrpl14 (ENSRNOG00000019734) #12	Aars2 (ENSRNOG00000025808)	Vegfa (ENSRNOG00000019598) #14	Mrps18a (ENSRNOG00000019511) #15	Rsph9 (ENSRNOG00000019474) #16	Mad2l1bp (ENSRNOG00000019463) #17	Rps2-ps6 (ENSRNOG00000022934)	Gtpbp2 (ENSRNOG00000019332) #18	Polh (ENSRNOG00000019195) #19	Xpo5 (ENSRNOG00000019085) #20	Polr1c (ENSRNOG00000019079) #21	Yipf3 (ENSRNOG00000018998) #22	Lrrc73 (ENSRNOG00000039856) #23	Tjap1 (ENSRNOG00000018980) #24	Dlk2 (ENSRNOG00000018949) #25	Abcc10 (ENSRNOG00000018863) #26	Zfp318 (ENSRNOG00000018741) #27	Crip3 (ENSRNOG00000018613) #28	Slc22a7 (ENSRNOG00000018420) #29	Ttbk1 (ENSRNOG00000018416) #30	Dnph1 (ENSRNOG00000018397) #31	Cul9 (ENSRNOG00000018372) #32	Srf (ENSRNOG00000018232) #33	Ptk7 (ENSRNOG00000039976) #34	Klc4 (ENSRNOG00000018168) #35	Mrpl2 (ENSRNOG00000018057) #36	Cul7 (ENSRNOG00000017857) #37