Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000157927 #7	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00940000157927 #7	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00940000157927 #7	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Muroidea	ANCESTRAL SPECIES	42	ENSGT00940000157927 #7	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Cricetidae	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f.a ##32
Cricetidae_B	ANCESTRAL SPECIES	32	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f.a ##32
Northern American deer mouse	MODERN SPECIES	13	Slc35b2 (ENSPEMG00000010433) #7	ENSPEMG00000020801 #8	Slc29a1 (ENSPEMG00000012099) #9	Mymx (ENSPEMG00000031136) #10	Capn11 (ENSPEMG00000016267) #11	Tmem63b (ENSPEMG00000020790) #12	ENSPEMG00000007451 #13	Vegfa (ENSPEMG00000023496) #14	Mrps18a (ENSPEMG00000000405) #15	Rsph9 (ENSPEMG00000011206) #16	Mad2l1bp (ENSPEMG00000003113) #17	Gtpbp2 (ENSPEMG00000021976) #18	Polh (ENSPEMG00000014884) #19	Xpo5 (ENSPEMG00000020387) #20	Polr1c (ENSPEMG00000006970) #21	Yipf3 (ENSPEMG00000013680) #22	Lrrc73 (ENSPEMG00000010422) #23	Tjap1 (ENSPEMG00000000063) #24	Dlk2 (ENSPEMG00000014891) #25	Abcc10 (ENSPEMG00000008293) #26	ENSPEMG00000024236 #27	Crip3 (ENSPEMG00000015270) #28	Slc22a7 (ENSPEMG00000010267) #29	Ttbk1 (ENSPEMG00000023732) #30	Dnph1 (ENSPEMG00000017242) #31	Cul9 (ENSPEMG00000023429) #32	Srf (ENSPEMG00000024074) #33	Ptk7 (ENSPEMG00000008577) #34	Klc4 (ENSPEMG00000013017) #35	Mrpl2 (ENSPEMG00000009477) #36	ENSPEMG00000029429 #37
Prairie vole	MODERN SPECIES	352	Adgrf4 (ENSMOCG00000007247)	Opn5 (ENSMOCG00000015157)	Ptchd4 (ENSMOCG00000009170)	Mmut (ENSMOCG00000006660)	Cenpq (ENSMOCG00000020003)	Glyatl3 (ENSMOCG00000010563)	Rhag (ENSMOCG00000017965)	Crisp2 (ENSMOCG00000015071)	ENSMOCG00000007214	ENSMOCG00000006213	Mad2l1bp (ENSMOCG00000010147) #17	Gtpbp2 (ENSMOCG00000014945) #18	Polh (ENSMOCG00000014193) #19	Xpo5 (ENSMOCG00000016105) #20	Polr1c (ENSMOCG00000017549) #21	Yipf3 (ENSMOCG00000013556) #22	Lrrc73 (ENSMOCG00000013005) #23	Tjap1 (ENSMOCG00000019758) #24	Dlk2 (ENSMOCG00000010846) #25	ENSMOCG00000011089 #26	ENSMOCG00000003424 #26	ENSMOCG00000019472 #26	Zfp318 (ENSMOCG00000017163) #27	Crip3 (ENSMOCG00000016524) #28	Slc22a7 (ENSMOCG00000019817) #29	Ttbk1 (ENSMOCG00000017960) #30	Dnph1 (ENSMOCG00000016980) #31	Cul9 (ENSMOCG00000012664) #32	Srf (ENSMOCG00000018008) #33	Ptk7 (ENSMOCG00000006889) #34	Klc4 (ENSMOCG00000001647) #35
Cricetinae	ANCESTRAL SPECIES	28	ENSGT00940000157927 #7	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f.a ##32
Chinese hamster chok1gshd	MODERN SPECIES	184	Mdfi (ENSCGRG00001012532)	Tfeb (ENSCGRG00001012215)	Pgc (ENSCGRG00001020240)	Frs3 (ENSCGRG00001017194)	Prickle4 (ENSCGRG00001021444)	Tomm6 (ENSCGRG00001023467)	Usp49 (ENSCGRG00001017792)	Med20 (ENSCGRG00001018311)	ENSCGRG00001022668	Rsph9 (ENSCGRG00001023633) #16	ENSCGRG00001000765 #17	Gtpbp2 (ENSCGRG00001006422) #18	Polh (ENSCGRG00001013398) #19	Xpo5 (ENSCGRG00001010034) #20	Polr1c (ENSCGRG00001017533) #21	Yipf3 (ENSCGRG00001020265) #22	Lrrc73 (ENSCGRG00001018661) #23	Tjap1 (ENSCGRG00001020623) #24	Dlk2 (ENSCGRG00001003035) #25	Abcc10 (ENSCGRG00001021477) #26	Zfp318 (ENSCGRG00001000676) #27	Crip3 (ENSCGRG00001019575) #28	Slc22a7 (ENSCGRG00001000068) #29	Ttbk1 (ENSCGRG00001012675) #30	DNPH1 (ENSCGRG00001016615) #31	Cul9 (ENSCGRG00001021627) #32	Srf (ENSCGRG00001015130) #33	Ptk7 (ENSCGRG00001019336) #34	Klc4 (ENSCGRG00001014841) #35	Mrpl2 (ENSCGRG00001022895) #36	Cul7 (ENSCGRG00001018296) ##32
Golden Hamster	MODERN SPECIES	649	ENSMAUG00000010907	Nfkbie (ENSMAUG00000012047)	Slc35b2 (ENSMAUG00000017236) #7	Hsp90ab1 (ENSMAUG00000018422) #8	Slc29a1 (ENSMAUG00000006341) #9	Capn11 (ENSMAUG00000001798) #11	Tmem63b (ENSMAUG00000007946) #12	Mrpl14 (ENSMAUG00000017756) #13	Vegfa (ENSMAUG00000007292) #14	Rsph9 (ENSMAUG00000010828) #16	Mad2l1bp (ENSMAUG00000011492) #17	Gtpbp2 (ENSMAUG00000011899) #18	Polh (ENSMAUG00000009711) #19	Xpo5 (ENSMAUG00000011670) #20	Polr1c (ENSMAUG00000014329) #21	Yipf3 (ENSMAUG00000019181) #22	Lrrc73 (ENSMAUG00000019479) #23	Tjap1 (ENSMAUG00000000201) #24	Dlk2 (ENSMAUG00000005674) #25	Abcc10 (ENSMAUG00000008720) #26	Zfp318 (ENSMAUG00000016068) #27	Crip3 (ENSMAUG00000018230) #28	Slc22a7 (ENSMAUG00000003584) #29	Ttbk1 (ENSMAUG00000008529) #30	Dnph1 (ENSMAUG00000003688) #31	Cul9 (ENSMAUG00000010584) #32	Srf (ENSMAUG00000018159) #33	Ptk7 (ENSMAUG00000000440) #34	Klc4 (ENSMAUG00000000606) #35	Mrpl2 (ENSMAUG00000008326) #36	Cul7 (ENSMAUG00000015878) ##32
Murinae	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Mus	ANCESTRAL SPECIES	16	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Mus_A	ANCESTRAL SPECIES	10	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Mus_B	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Mus_C	ANCESTRAL SPECIES	9	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00860000135742	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
spretus	MODERN SPECIES	8	Hsp90ab1 (MGP_SPRETEiJ_G0022560) #8	Slc29a1 (MGP_SPRETEiJ_G0022561) #9	Mymx (MGP_SPRETEiJ_G0022562) #10	Capn11 (MGP_SPRETEiJ_G0022563) #11	Tmem63b (MGP_SPRETEiJ_G0022564) #12	Mrpl14 (MGP_SPRETEiJ_G0022565) #13	1600014C23Rik (MGP_SPRETEiJ_G0022566)	Vegfa (MGP_SPRETEiJ_G0022567) #14	Mrps18a (MGP_SPRETEiJ_G0022568) #15	Rsph9 (MGP_SPRETEiJ_G0022569) #16	Mad2l1bp (MGP_SPRETEiJ_G0022570) #17	Gtpbp2 (MGP_SPRETEiJ_G0022571) #18	Polh (MGP_SPRETEiJ_G0022572) #19	Xpo5 (MGP_SPRETEiJ_G0022573) #20	Polr1c (MGP_SPRETEiJ_G0022574) #21	Yipf3 (MGP_SPRETEiJ_G0022575) #22	Lrrc73 (MGP_SPRETEiJ_G0022576) #23	Tjap1 (MGP_SPRETEiJ_G0022577) #24	Dlk2 (MGP_SPRETEiJ_G0022578) #25	Abcc10 (MGP_SPRETEiJ_G0022579) #26	Zfp318 (MGP_SPRETEiJ_G0022580) #27	Crip3 (MGP_SPRETEiJ_G0022581) #28	Slc22a7 (MGP_SPRETEiJ_G0022582) #29	MGP_SPRETEiJ_G0022583	Ttbk1 (MGP_SPRETEiJ_G0022584) #30	Dnph1 (MGP_SPRETEiJ_G0022585) #31	Cul9 (MGP_SPRETEiJ_G0022586) #32	Srf (MGP_SPRETEiJ_G0022587) #33	Ptk7 (MGP_SPRETEiJ_G0022588) #34	Klc4 (MGP_SPRETEiJ_G0022589) #35	Mrpl2 (MGP_SPRETEiJ_G0022590) #36
Steppe mouse	MODERN SPECIES	2906							ENSMSIG00000012779	Vegfa (ENSMSIG00000012606) #14	Mrps18a (ENSMSIG00000012569) #15	Rsph9 (ENSMSIG00000012557) #16	Mad2l1bp (ENSMSIG00000012546) #17	Gtpbp2 (ENSMSIG00000012510) #18	Polh (ENSMSIG00000012488) #19	Xpo5 (ENSMSIG00000012426) #20	Polr1c (ENSMSIG00000012395) #21	Yipf3 (ENSMSIG00000012375) #22	Lrrc73 (ENSMSIG00000012347) #23	Tjap1 (ENSMSIG00000012119) #24	Dlk2 (ENSMSIG00000012088) #25	Abcc10 (ENSMSIG00000011931) #26	Zfp318 (ENSMSIG00000011902) #27	Crip3 (ENSMSIG00000011845) #28	Slc22a7 (ENSMSIG00000011832) #29	Ttbk1 (ENSMSIG00000011787) #30	ENSMSIG00000011778 #31	Cul9 (ENSMSIG00000011560) #32	Srf (ENSMSIG00000011548) #33	Ptk7 (ENSMSIG00000011532) #34	Klc4 (ENSMSIG00000011494) #35	Mrpl2 (ENSMSIG00000011453) #36	Cul7 (ENSMSIG00000011412) #37
Mouse	MODERN SPECIES	8	Hsp90ab1 (ENSMUSG00000023944) #8	Slc29a1 (ENSMUSG00000023942) #9	Mymx (ENSMUSG00000079471) #10	Capn11 (ENSMUSG00000058626) #11	Tmem63b (ENSMUSG00000036026) #12	Mrpl14 (ENSMUSG00000023939) #13	1600014C23Rik (ENSMUSG00000094690)	Vegfa (ENSMUSG00000023951) #14	Mrps18a (ENSMUSG00000023967) #15	Rsph9 (ENSMUSG00000023966) #16	Mad2l1bp (ENSMUSG00000034509) #17	Gtpbp2 (ENSMUSG00000023952) #18	Polh (ENSMUSG00000023953) #19	Xpo5 (ENSMUSG00000067150) #20	Polr1c (ENSMUSG00000067148) #21	Yipf3 (ENSMUSG00000071074) #22	Lrrc73 (ENSMUSG00000071073) #23	Tjap1 (ENSMUSG00000012296) #24	Dlk2 (ENSMUSG00000047428) #25	Abcc10 (ENSMUSG00000032842) #26	Zfp318 (ENSMUSG00000015597) #27	Crip3 (ENSMUSG00000023968) #28	Slc22a7 (ENSMUSG00000067144) #29	Ttbk1 (ENSMUSG00000015599) #30	Dnph1 (ENSMUSG00000040658) #31	Cul9 (ENSMUSG00000040327) #32	Srf (ENSMUSG00000015605) #33	Ptk7 (ENSMUSG00000023972) #34	Klc4 (ENSMUSG00000003546) #35	Mrpl2 (ENSMUSG00000002767) #36	Cul7 (ENSMUSG00000038545) #37
Ryukyu mouse	MODERN SPECIES	8	Hsp90ab1 (MGP_CAROLIEiJ_G0021648) #8	Slc29a1 (MGP_CAROLIEiJ_G0021649) #9	MGP_CAROLIEiJ_G0021650 #10	Capn11 (MGP_CAROLIEiJ_G0021651) #11	Tmem63b (MGP_CAROLIEiJ_G0021652) #12	Mrpl14 (MGP_CAROLIEiJ_G0021653) #13	MGP_CAROLIEiJ_G0021654	MGP_CAROLIEiJ_G0021655 #14	Mrps18a (MGP_CAROLIEiJ_G0021656) #15	Rsph9 (MGP_CAROLIEiJ_G0021657) #16	Mad2l1bp (MGP_CAROLIEiJ_G0021658) #17	Gtpbp2 (MGP_CAROLIEiJ_G0021659) #18	Polh (MGP_CAROLIEiJ_G0021660) #19	Xpo5 (MGP_CAROLIEiJ_G0021661) #20	Polr1c (MGP_CAROLIEiJ_G0021662) #21	Yipf3 (MGP_CAROLIEiJ_G0021663) #22	Lrrc73 (MGP_CAROLIEiJ_G0021664) #23	Tjap1 (MGP_CAROLIEiJ_G0021665) #24	Dlk2 (MGP_CAROLIEiJ_G0021666) #25	Abcc10 (MGP_CAROLIEiJ_G0021667) #26	Zfp318 (MGP_CAROLIEiJ_G0021668) #27	Crip3 (MGP_CAROLIEiJ_G0021669) #28	Slc22a7 (MGP_CAROLIEiJ_G0021670) #29	MGP_CAROLIEiJ_G0021671	Ttbk1 (MGP_CAROLIEiJ_G0021672) #30	Dnph1 (MGP_CAROLIEiJ_G0021673) #31	Cul9 (MGP_CAROLIEiJ_G0021674) #32	Srf (MGP_CAROLIEiJ_G0021675) #33	Ptk7 (MGP_CAROLIEiJ_G0021676) #34	Klc4 (MGP_CAROLIEiJ_G0021677) #35	Mrpl2 (MGP_CAROLIEiJ_G0021678) #36
Shrew mouse	MODERN SPECIES	9	MGP_PahariEiJ_G0020640 ##8	Slc29a1 (MGP_PahariEiJ_G0020641) #9	MGP_PahariEiJ_G0020642 #10	Capn11 (MGP_PahariEiJ_G0020643) #11	Tmem63b (MGP_PahariEiJ_G0020644) #12	Mrpl14 (MGP_PahariEiJ_G0020645) #13	1600014C23Rik (MGP_PahariEiJ_G0020646)	Vegfa (MGP_PahariEiJ_G0020647) #14	Mrps18a (MGP_PahariEiJ_G0020648) #15	Rsph9 (MGP_PahariEiJ_G0020649) #16	Mad2l1bp (MGP_PahariEiJ_G0020650) #17	Gtpbp2 (MGP_PahariEiJ_G0020651) #18	Polh (MGP_PahariEiJ_G0020652) #19	Xpo5 (MGP_PahariEiJ_G0020653) #20	Polr1c (MGP_PahariEiJ_G0020654) #21	Yipf3 (MGP_PahariEiJ_G0020655) #22	Lrrc73 (MGP_PahariEiJ_G0020656) #23	MGP_PahariEiJ_G0020657	Dlk2 (MGP_PahariEiJ_G0020658) #25	Abcc10 (MGP_PahariEiJ_G0020659) #26	Zfp318 (MGP_PahariEiJ_G0020660) #27	MGP_PahariEiJ_G0020661 #28	Slc22a7 (MGP_PahariEiJ_G0020662) #29	Ttbk1 (MGP_PahariEiJ_G0020663) #30	Dnph1 (MGP_PahariEiJ_G0020664) #31	Cul9 (MGP_PahariEiJ_G0020665) #32	Srf (MGP_PahariEiJ_G0020666) #33	Ptk7 (MGP_PahariEiJ_G0020667) #34	Klc4 (MGP_PahariEiJ_G0020668) #35	Mrpl2 (MGP_PahariEiJ_G0020669) #36	Cul7 (MGP_PahariEiJ_G0020670) #37
Rat	MODERN SPECIES	19	Slc29a1 (ENSRNOG00000019752) #9	Mymx (ENSRNOG00000042497) #10	Capn11 (ENSRNOG00000026025) #11	Tmem63b (ENSRNOG00000019743) #12	Mrpl14 (ENSRNOG00000019734) #13	Aars2 (ENSRNOG00000025808)	Vegfa (ENSRNOG00000019598) #14	Mrps18a (ENSRNOG00000019511) #15	Rsph9 (ENSRNOG00000019474) #16	Mad2l1bp (ENSRNOG00000019463) #17	Rps2-ps6 (ENSRNOG00000022934)	Gtpbp2 (ENSRNOG00000019332) #18	Polh (ENSRNOG00000019195) #19	Xpo5 (ENSRNOG00000019085) #20	Polr1c (ENSRNOG00000019079) #21	Yipf3 (ENSRNOG00000018998) #22	Lrrc73 (ENSRNOG00000039856) #23	Tjap1 (ENSRNOG00000018980)	Dlk2 (ENSRNOG00000018949) #25	Abcc10 (ENSRNOG00000018863) #26	Zfp318 (ENSRNOG00000018741) #27	Crip3 (ENSRNOG00000018613) #28	Slc22a7 (ENSRNOG00000018420) #29	Ttbk1 (ENSRNOG00000018416) #30	Dnph1 (ENSRNOG00000018397) #31	Cul9 (ENSRNOG00000018372) #32	Srf (ENSRNOG00000018232) #33	Ptk7 (ENSRNOG00000039976) #34	Klc4 (ENSRNOG00000018168) #35	Mrpl2 (ENSRNOG00000018057) #36	Cul7 (ENSRNOG00000017857) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	633	Nfkbie (ENSNGAG00000021559)	Slc35b2 (ENSNGAG00000016794) #7	Hsp90ab1 (ENSNGAG00000017929) #8	Slc29a1 (ENSNGAG00000021923) #9	Capn11 (ENSNGAG00000007388) #11	Tmem63b (ENSNGAG00000014742) #12	Mrpl14 (ENSNGAG00000016826) #13	Vegfa (ENSNGAG00000018293) #14	Mrps18a (ENSNGAG00000020052) #15	Rsph9 (ENSNGAG00000020871) #16	Mad2l1bp (ENSNGAG00000021195) #17	Gtpbp2 (ENSNGAG00000021674) #18	Polh (ENSNGAG00000022986) #19	Xpo5 (ENSNGAG00000015950) #20	Polr1c (ENSNGAG00000023487) #21	Yipf3 (ENSNGAG00000023784) #22	Lrrc73 (ENSNGAG00000023998) #23	Tjap1 (ENSNGAG00000001708) #24	Dlk2 (ENSNGAG00000010416) #25	ENSNGAG00000013794 #26	ENSNGAG00000016294 #26	ENSNGAG00000007514 #26	ENSNGAG00000013729 #27	Crip3 (ENSNGAG00000016800) #28	Slc22a7 (ENSNGAG00000021459) #29	ENSNGAG00000022106 #30	Dnph1 (ENSNGAG00000023055) #31	Cul9 (ENSNGAG00000014662) #32	Srf (ENSNGAG00000002363) #33	Ptk7 (ENSNGAG00000007758) #34	Klc4 (ENSNGAG00000013283) #35
Lesser Egyptian jerboa	MODERN SPECIES	41	Slc35b2 (ENSJJAG00000020418) #7	Hsp90ab1 (ENSJJAG00000018744) #8	ENSJJAG00000021418 #9	Mymx (ENSJJAG00000013992) #10	Capn11 (ENSJJAG00000023762) #11	Tmem63b (ENSJJAG00000021961) #12	Mrpl14 (ENSJJAG00000021477) #13	Vegfa (ENSJJAG00000007689) #14	Mrps18a (ENSJJAG00000006567) #15	Rsph9 (ENSJJAG00000019847) #16	Mad2l1bp (ENSJJAG00000022925) #17	Gtpbp2 (ENSJJAG00000023430) #18	Polh (ENSJJAG00000013744) #19	Xpo5 (ENSJJAG00000009521) #20	Polr1c (ENSJJAG00000023110) #21	Yipf3 (ENSJJAG00000021863) #22	Lrrc73 (ENSJJAG00000022553) #23	ENSJJAG00000000504	Dlk2 (ENSJJAG00000013128) #25	Abcc10 (ENSJJAG00000023168) #26	Zfp318 (ENSJJAG00000018552) #27	Crip3 (ENSJJAG00000011758) #28	Slc22a7 (ENSJJAG00000013095) #29	ENSJJAG00000019825 #30	ENSJJAG00000022638 #31	Cul9 (ENSJJAG00000012861) #32	Srf (ENSJJAG00000021937) #33	Ptk7 (ENSJJAG00000015230) #34	Klc4 (ENSJJAG00000015105) #35	Mrpl2 (ENSJJAG00000009715) #36	Cul7 (ENSJJAG00000010201) #37
Kangaroo rat	MODERN SPECIES	363	Hsp90ab1 (ENSDORG00000010981) #8	ENSDORG00000006421	Capn11 (ENSDORG00000026068) #11	Tmem63b (ENSDORG00000008237) #12	Mrpl14 (ENSDORG00000008236) #13	ENSDORG00000025211	ENSDORG00000027181 #14	ENSDORG00000023174 #14	Mrps18a (ENSDORG00000014583) #15	Rsph9 (ENSDORG00000014581) #16	Mad2l1bp (ENSDORG00000027056) #17	Gtpbp2 (ENSDORG00000000443) #18	Polh (ENSDORG00000000441) #19	Xpo5 (ENSDORG00000000432) #20	Polr1c (ENSDORG00000000429) #21	Yipf3 (ENSDORG00000000424) #22	Lrrc73 (ENSDORG00000023671) #23	Tjap1 (ENSDORG00000000420) #24	Dlk2 (ENSDORG00000001159) #25	Abcc10 (ENSDORG00000001157) #26	Zfp318 (ENSDORG00000010890) #27	Crip3 (ENSDORG00000010889) #28	Slc22a7 (ENSDORG00000010888) #29	ENSDORG00000010886 #30	ENSDORG00000026406 #31	Cul9 (ENSDORG00000002811) #32	Srf (ENSDORG00000000859) #33	Ptk7 (ENSDORG00000012193) #34	Klc4 (ENSDORG00000012190) #35	Mrpl2 (ENSDORG00000012189) #36	Rrp36 (ENSDORG00000012186)
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000157927 #7	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000157927 #7	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Marmotini	ANCESTRAL SPECIES	18	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00960000190714	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812.h #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Marmotini_b	ANCESTRAL SPECIES	8	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00960000190714	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812.h #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Arctic ground squirrel	MODERN SPECIES	25											MAD2L1BP (ENSUPAG00010018636) #17	GTPBP2 (ENSUPAG00010018626) #18	POLH (ENSUPAG00010018589) #19	XPO5 (ENSUPAG00010018556) #20	POLR1C (ENSUPAG00010018540) #21	YIPF3 (ENSUPAG00010018525) #22	LRRC73 (ENSUPAG00010018517) #23	TJAP1 (ENSUPAG00010018437) #24	DLK2 (ENSUPAG00010018412) #25	ABCC10 (ENSUPAG00010018361) #26	ZNF318 (ENSUPAG00010018340) #27	CRIP3 (ENSUPAG00010018305) #28	SLC22A7 (ENSUPAG00010018280) #29	TTBK1 (ENSUPAG00010018241) #30	DNPH1 (ENSUPAG00010018235) #31	ENSUPAG00010018229 #32	ENSUPAG00010018129 #32	SRF (ENSUPAG00010018113) #33	PTK7 (ENSUPAG00010018092) #34	KLC4 (ENSUPAG00010018084) #35	MRPL2 (ENSUPAG00010018077) #36
Squirrel	MODERN SPECIES	76	SLC35B2 (ENSSTOG00000026446) #7	HSP90AB1 (ENSSTOG00000024614) #8	SLC29A1 (ENSSTOG00000003337) #9	MYMX (ENSSTOG00000030271) #10	CAPN11 (ENSSTOG00000003304) #11	TMEM63B (ENSSTOG00000007096) #12	MRPL14 (ENSSTOG00000004549) #13	VEGFA (ENSSTOG00000008877) #14	MRPS18A (ENSSTOG00000004490) #15	RSPH9 (ENSSTOG00000028063) #16	MAD2L1BP (ENSSTOG00000028891) #17	GTPBP2 (ENSSTOG00000021274) #18	POLH (ENSSTOG00000010681) #19	XPO5 (ENSSTOG00000020172) #20	POLR1C (ENSSTOG00000010631) #21	YIPF3 (ENSSTOG00000010624) #22	LRRC73 (ENSSTOG00000010618) #23	TJAP1 (ENSSTOG00000010606) #24	DLK2 (ENSSTOG00000010600) #25	ABCC10 (ENSSTOG00000010566) #26	ENSSTOG00000012280 #27	CRIP3 (ENSSTOG00000024025) #28	SLC22A7 (ENSSTOG00000024272) #29	TTBK1 (ENSSTOG00000014248) #30	DNPH1 (ENSSTOG00000026925) #31	CUL9 (ENSSTOG00000014226) #32	SRF (ENSSTOG00000014222) #33	PTK7 (ENSSTOG00000014198) #34	KLC4 (ENSSTOG00000014183) #35	MRPL2 (ENSSTOG00000023948) #36	CUL7 (ENSSTOG00000009522) #37
Alpin marmot	MODERN SPECIES	20	HSP90AB1 (ENSMMMG00000024577) #8	SLC29A1 (ENSMMMG00000024571) #9	MYMX (ENSMMMG00000024570) #10	CAPN11 (ENSMMMG00000024569) #11	TMEM63B (ENSMMMG00000024568) #12	MRPL14 (ENSMMMG00000024567) #13	ENSMMMG00000024566	VEGFA (ENSMMMG00000024565) #14	MRPS18A (ENSMMMG00000024564) #15	RSPH9 (ENSMMMG00000024563) #16	ENSMMMG00000024562 #17	GTPBP2 (ENSMMMG00000024561) #18	POLH (ENSMMMG00000024560) #19	XPO5 (ENSMMMG00000024559) #20	POLR1C (ENSMMMG00000024558) #21	YIPF3 (ENSMMMG00000024557) #22	LRRC73 (ENSMMMG00000024556) #23	TJAP1 (ENSMMMG00000024555) #24	DLK2 (ENSMMMG00000024553) #25	ABCC10 (ENSMMMG00000024552) #26	ENSMMMG00000024551	ZNF318 (ENSMMMG00000024550) #27	CRIP3 (ENSMMMG00000024549) #28	SLC22A7 (ENSMMMG00000024548) #29	TTBK1 (ENSMMMG00000024547) #30	DNPH1 (ENSMMMG00000024546) #31	CUL9 (ENSMMMG00000024544) #32	SRF (ENSMMMG00000024543) #33	PTK7 (ENSMMMG00000024542) #34	KLC4 (ENSMMMG00000024541) #35	MRPL2 (ENSMMMG00000024538) #36
Eurasian red squirrel	MODERN SPECIES	16	HSP90AB1 (ENSSVLG00005004982) #8	SLC29A1 (ENSSVLG00005004999) #9	MYMX (ENSSVLG00005005017) #10	CAPN11 (ENSSVLG00005005041) #11	TMEM63B (ENSSVLG00005005124) #12	MRPL14 (ENSSVLG00005005175) #13	VEGFA (ENSSVLG00005005248) #14	MRPS18A (ENSSVLG00005005389) #15	RSPH9 (ENSSVLG00005005429) #16	MAD2L1BP (ENSSVLG00005005455) #17	ENSSVLG00005005500 #18	POLH (ENSSVLG00005005606) #19	ENSSVLG00005005709	XPO5 (ENSSVLG00005005755) #20	POLR1C (ENSSVLG00005005820) #21	YIPF3 (ENSSVLG00005005873) #22	LRRC73 (ENSSVLG00005005929) #23	TJAP1 (ENSSVLG00005005960) #24	DLK2 (ENSSVLG00005006024) #25	ABCC10 (ENSSVLG00005006073) #26	ZNF318 (ENSSVLG00005006110) #27	CRIP3 (ENSSVLG00005006201) #28	SLC22A7 (ENSSVLG00005006303) #29	TTBK1 (ENSSVLG00005006427) #30	DNPH1 (ENSSVLG00005006570) #31	CUL9 (ENSSVLG00005006664) #32	SRF (ENSSVLG00005006722) #33	PTK7 (ENSSVLG00005006890) #34	KLC4 (ENSSVLG00005007306) #35	MRPL2 (ENSSVLG00005007449) #36	CUL7 (ENSSVLG00005007507) #37
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000157927 #7	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00490000044373 #10	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Naked mole-rat female	MODERN SPECIES	4	SLC35B2 (ENSHGLG00000013337) #7	HSP90AB1 (ENSHGLG00000013490) #8	SLC29A1 (ENSHGLG00000013873) #9	MYMX (ENSHGLG00000014348) #10	ENSHGLG00000034302 #11	TMEM63B (ENSHGLG00000014725) #12	MRPL14 (ENSHGLG00000048124) #13	VEGFA (ENSHGLG00000045954) #14	MRPS18A (ENSHGLG00000014356) #15	RSPH9 (ENSHGLG00000050155) #16	MAD2L1BP (ENSHGLG00000014709) #17	GTPBP2 (ENSHGLG00000014886) #18	POLH (ENSHGLG00000019433) #19	XPO5 (ENSHGLG00000019191) #20	POLR1C (ENSHGLG00000039530) #21	YIPF3 (ENSHGLG00000019245) #22	LRRC73 (ENSHGLG00000019162) #23	TJAP1 (ENSHGLG00000050716) #24	DLK2 (ENSHGLG00000017186) #25	ABCC10 (ENSHGLG00000017199) #26	ZNF318 (ENSHGLG00000017209) #27	CRIP3 (ENSHGLG00000017216) #28	SLC22A7 (ENSHGLG00000019228) #29	TTBK1 (ENSHGLG00000019189) #30	DNPH1 (ENSHGLG00000045212) #31	CUL9 (ENSHGLG00000019373) #32	ENSHGLG00000019183 #33	ENSHGLG00000049441 #34	ENSHGLG00000032903	ENSHGLG00000017195	ZBTB22 (ENSHGLG00000017146)
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000159120	ENSGT00940000157927 #7	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Hystricomorpha_b	ANCESTRAL SPECIES	3	ENSGT00940000159120	ENSGT00940000157927 #7	ENSGT01020000230401.a.a.a.i.a.a #8	ENSGT00950000182898.a.a.a.a.b #9	ENSGT00940000158672 #11	ENSGT00940000157084 #12	ENSGT00390000001121 #13	ENSGT00940000157284 #14	ENSGT00390000006493 #15	ENSGT00390000018686 #16	ENSGT00390000003812 #17	ENSGT00940000155636 #18	ENSGT00940000157048 #19	ENSGT00940000153408.A #20	ENSGT00950000183100.B #21	ENSGT00940000153766.A #22	ENSGT00390000003256 #23	ENSGT00940000161543 #24	ENSGT00940000160761 #25	ENSGT00940000161082 #26	ENSGT00390000000614 #27	ENSGT00940000161321 #28	ENSGT00940000154922.b #29	ENSGT00940000160981 #30	ENSGT00390000001216 #31	ENSGT00940000153954.e #32	ENSGT00400000022158 #33	ENSGT00940000157908 #34	ENSGT00940000161323 #35	ENSGT00940000153244.A #36	ENSGT00940000153954.f #37
Long-tailed chinchilla	MODERN SPECIES	144	NFKBIE (ENSCLAG00000011710)	SLC35B2 (ENSCLAG00000010878) #7	HSP90AB1 (ENSCLAG00000015740) #8	SLC29A1 (ENSCLAG00000010529) #9	CAPN11 (ENSCLAG00000013084) #11	TMEM63B (ENSCLAG00000014238) #12	MRPL14 (ENSCLAG00000016855) #13	ENSCLAG00000014201 #14	MRPS18A (ENSCLAG00000012929) #15	RSPH9 (ENSCLAG00000012706) #16	MAD2L1BP (ENSCLAG00000011121) #17	GTPBP2 (ENSCLAG00000010271) #18	POLH (ENSCLAG00000010068) #19	XPO5 (ENSCLAG00000009723) #20	POLR1C (ENSCLAG00000009266) #21	YIPF3 (ENSCLAG00000015747) #22	LRRC73 (ENSCLAG00000015757) #23	TJAP1 (ENSCLAG00000009058) #24	DLK2 (ENSCLAG00000012976) #25	ABCC10 (ENSCLAG00000012360) #26	ZNF318 (ENSCLAG00000009156) #27	CRIP3 (ENSCLAG00000010491) #28	SLC22A7 (ENSCLAG00000009201) #29	TTBK1 (ENSCLAG00000012525) #30	DNPH1 (ENSCLAG00000011315) #31	CUL9 (ENSCLAG00000013036) #32	SRF (ENSCLAG00000010541) #33	PTK7 (ENSCLAG00000011720) #34	KLC4 (ENSCLAG00000012910) #35	MRPL2 (ENSCLAG00000011117) #36	CUL7 (ENSCLAG00000009633) #37
Degu	MODERN SPECIES	46	NFKBIE (ENSODEG00000015243)	SLC35B2 (ENSODEG00000015458) #7	ENSODEG00000015488 ##8	ENSODEG00000015863	CAPN11 (ENSODEG00000015728) #11	TMEM63B (ENSODEG00000015474) #12	MRPL14 (ENSODEG00000015718) #13	ENSODEG00000016904 #14	MRPS18A (ENSODEG00000015388) #15	RSPH9 (ENSODEG00000015426) #16	MAD2L1BP (ENSODEG00000015761) #17	GTPBP2 (ENSODEG00000015979) #18	POLH (ENSODEG00000015994) #19	XPO5 (ENSODEG00000017078) #20	ENSODEG00000015831 #21	YIPF3 (ENSODEG00000016177) #22	LRRC73 (ENSODEG00000015609) #23	TJAP1 (ENSODEG00000016503) #24	DLK2 (ENSODEG00000015810) #25	ABCC10 (ENSODEG00000016331) #26	ZNF318 (ENSODEG00000015646) #27	ENSODEG00000020345	CRIP3 (ENSODEG00000015500) #28	SLC22A7 (ENSODEG00000016284) #29	ENSODEG00000015919 #30	DNPH1 (ENSODEG00000015708) #31	CUL9 (ENSODEG00000016007) #32	SRF (ENSODEG00000016147) #33	PTK7 (ENSODEG00000015717) #34	KLC4 (ENSODEG00000016341) #35	MRPL2 (ENSODEG00000015619) #36
Guinea pig	MODERN SPECIES	15	NFKBIE (ENSCPOG00000020455)	SLC35B2 (ENSCPOG00000032240) #7	HSP90AB1 (ENSCPOG00000003887) #8	SLC29A1 (ENSCPOG00000005137) #9	CAPN11 (ENSCPOG00000020426) #11	TMEM63B (ENSCPOG00000026287) #12	MRPL14 (ENSCPOG00000031064) #13	ENSCPOG00000013559 #14	MRPS18A (ENSCPOG00000022949) #15	RSPH9 (ENSCPOG00000020076) #16	MAD2L1BP (ENSCPOG00000036430) #17	GTPBP2 (ENSCPOG00000026957) #18	POLH (ENSCPOG00000013907) #19	XPO5 (ENSCPOG00000009917) #20	POLR1C (ENSCPOG00000038098) #21	YIPF3 (ENSCPOG00000009908) #22	LRRC73 (ENSCPOG00000024689) #23	TJAP1 (ENSCPOG00000009903) #24	DLK2 (ENSCPOG00000037284) #25	ABCC10 (ENSCPOG00000009891) #26	ZNF318 (ENSCPOG00000009884) #27	CRIP3 (ENSCPOG00000025292) #28	SLC22A7 (ENSCPOG00000012952) #29	TTBK1 (ENSCPOG00000039436) #30	DNPH1 (ENSCPOG00000025216) #31	CUL9 (ENSCPOG00000003615) #32	SRF (ENSCPOG00000022327) #33	PTK7 (ENSCPOG00000003045) #34	KLC4 (ENSCPOG00000000230) #35	MRPL2 (ENSCPOG00000024326) #36	CUL7 (ENSCPOG00000008848) #37