Glires	ANCESTRAL SPECIES	4	ENSGT00390000000062.x.a #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00900000143486	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00950000182976.a.a	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000163320	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000164546	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34
Rodentia	ANCESTRAL SPECIES	5	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000163320	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000164546	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000164546	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35
Myomorpha	ANCESTRAL SPECIES	2	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a.b #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000164546	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35
Muroidea	ANCESTRAL SPECIES	5	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a.b #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000164546	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00390000006747 #7	ENSGT00390000000062.x.a.b #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00390000018318.u.b.a.b.a.a.b #12	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000164546	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00390000006747 #7	ENSGT00390000000062.x.a.b #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00390000018318.u.b.a.b.a.a.b #12	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000164546	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35
Cricetidae_B	ANCESTRAL SPECIES	29	ENSGT00390000006747 #7	ENSGT00390000000062.x.a.b #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00390000018318.u.b.a.b.a.a.b #12	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35	ENSGT00940000154818.a.a #36	ENSGT00940000156615 #37
Prairie vole	MODERN SPECIES	10	ENSMOCG00000016954 #7	Sycp3 (ENSMOCG00000018486) #8	Chpt1 (ENSMOCG00000014213) #9	Mybpc1 (ENSMOCG00000022013) #10	Spic (ENSMOCG00000015321) #11	ENSMOCG00000009467 #12	Arl1 (ENSMOCG00000005852) #13	Utp20 (ENSMOCG00000015242) #14	Slc5a8 (ENSMOCG00000012457) #15	Ano4 (ENSMOCG00000015645) #16	Gas2l3 (ENSMOCG00000010014) #17	Nr1h4 (ENSMOCG00000006519) #18	Slc17a8 (ENSMOCG00000009428) #19	ENSMOCG00000016884 #20	Actr6 (ENSMOCG00000020691) #21	Uhrf1bp1l (ENSMOCG00000003118) #22	Anks1b (ENSMOCG00000008363) #23	Apaf1 (ENSMOCG00000015964) #24	Ikbip (ENSMOCG00000003674) #25	Slc25a3 (ENSMOCG00000011110) #26	Tmpo (ENSMOCG00000003846) #27	Nedd1 (ENSMOCG00000016729) #28	Cfap54 (ENSMOCG00000015195) #29	Cdk17 (ENSMOCG00000014292) #30	Elk3 (ENSMOCG00000012020) #31	Lta4h (ENSMOCG00000007811) #32	Hal (ENSMOCG00000020920) #33	Amdhd1 (ENSMOCG00000013736) #34	Ccdc38 (ENSMOCG00000000418) #35	Snrpf (ENSMOCG00000020437) #36	Ntn4 (ENSMOCG00000014630) #37
Northern American deer mouse	MODERN SPECIES	9	Gnptab (ENSPEMG00000020834) #7	Sycp3 (ENSPEMG00000021453) #8	ENSPEMG00000012990 #9	Mybpc1 (ENSPEMG00000021020) #10	Spic (ENSPEMG00000020720) #11	Arl1 (ENSPEMG00000008781) #13	Utp20 (ENSPEMG00000024120) #14	Slc5a8 (ENSPEMG00000020559) #15	Ano4 (ENSPEMG00000009170) #16	Gas2l3 (ENSPEMG00000023391) #17	Nr1h4 (ENSPEMG00000021973) #18	Slc17a8 (ENSPEMG00000013525) #19	ENSPEMG00000025459	Scyl2 (ENSPEMG00000015522) #20	Actr6 (ENSPEMG00000007827) #21	Uhrf1bp1l (ENSPEMG00000021207) #22	Anks1b (ENSPEMG00000021142) #23	Apaf1 (ENSPEMG00000013242) #24	Ikbip (ENSPEMG00000003189) #25	Slc25a3 (ENSPEMG00000007546) #26	Tmpo (ENSPEMG00000013139) #27	Nedd1 (ENSPEMG00000022166) #28	Cfap54 (ENSPEMG00000022516) #29	Cdk17 (ENSPEMG00000013082) #30	Elk3 (ENSPEMG00000015910) #31	Lta4h (ENSPEMG00000024211) #32	Hal (ENSPEMG00000022890) #33	Amdhd1 (ENSPEMG00000022642) #34	Ccdc38 (ENSPEMG00000021888) #35	Snrpf (ENSPEMG00000023326) #36	Ntn4 (ENSPEMG00000021404) #37
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00390000006747 #7	ENSGT00390000000062.x.a.b #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00390000018318.u.b.a.b.a.a.b #12	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000164546	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35	ENSGT00940000154818.a.b ##36
Chinese hamster chok1gshd	MODERN SPECIES	83	Gnptab (ENSCGRG00001022192) #7	Sycp3 (ENSCGRG00001006406) #8	Chpt1 (ENSCGRG00001011169) #9	Mybpc1 (ENSCGRG00001023486) #10	Spic (ENSCGRG00001005919) #11	ENSCGRG00001008037 #12	Arl1 (ENSCGRG00001010446) #13	Utp20 (ENSCGRG00001017151) #14	Slc5a8 (ENSCGRG00001014482) #15	Ano4 (ENSCGRG00001022718) #16	Gas2l3 (ENSCGRG00001015751) #17	Nr1h4 (ENSCGRG00001017990) #18	Slc17a8 (ENSCGRG00001021681) #19	ENSCGRG00001005091 #20	Actr6 (ENSCGRG00001019259) #21	Uhrf1bp1l (ENSCGRG00001015837) #22	ENSCGRG00001007098	ENSCGRG00001012704 #23	ENSCGRG00001010325 #23	Apaf1 (ENSCGRG00001019923) #24	Ikbip (ENSCGRG00001015426) #25	Slc25a3 (ENSCGRG00001015631) #26	Tmpo (ENSCGRG00001018759) #27	Nedd1 (ENSCGRG00001019132) #28	ENSCGRG00001014718	ENSCGRG00001019085	Cdk17 (ENSCGRG00001016887) #30	Elk3 (ENSCGRG00001021882) #31	Lta4h (ENSCGRG00001010777) #32	Hal (ENSCGRG00001000150) #33	Amdhd1 (ENSCGRG00001023437) #34
Golden Hamster	MODERN SPECIES	628	Gnptab (ENSMAUG00000017361) #7	Sycp3 (ENSMAUG00000012167) #8	Chpt1 (ENSMAUG00000012720) #9	Mybpc1 (ENSMAUG00000008414) #10	ENSMAUG00000008388 #12	Arl1 (ENSMAUG00000021923) #13	Utp20 (ENSMAUG00000011898) #14	Slc5a8 (ENSMAUG00000020619) #15	Ano4 (ENSMAUG00000021383) #16	Gas2l3 (ENSMAUG00000015984) #17	Nr1h4 (ENSMAUG00000011325) #18	Slc17a8 (ENSMAUG00000007901) #19	Scyl2 (ENSMAUG00000013849) #20	ENSMAUG00000010233 #21	ENSMAUG00000014661 #21	Uhrf1bp1l (ENSMAUG00000013302) #22	Anks1b (ENSMAUG00000010615) #23	ENSMAUG00000007841 #24	ENSMAUG00000022277 #25	Slc25a3 (ENSMAUG00000017601) #26	Tmpo (ENSMAUG00000014527) #27	ENSMAUG00000015762	Nedd1 (ENSMAUG00000013081) #28	ENSMAUG00000021431	ENSMAUG00000018845	Cdk17 (ENSMAUG00000017263) #30	Elk3 (ENSMAUG00000009662) #31	ENSMAUG00000008765	Lta4h (ENSMAUG00000001152) #32	Hal (ENSMAUG00000018900) #33	Amdhd1 (ENSMAUG00000018875) #34
Murinae	ANCESTRAL SPECIES	22	ENSGT00390000006747 #7	ENSGT00390000000062.x.a.b #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00390000018318.u.b.a.b.a.a.b #12	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35	ENSGT00940000154818.a.a #36	ENSGT00940000156615 #37
Mus	ANCESTRAL SPECIES	23	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a.b #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35	ENSGT00940000154818.a.a #36	ENSGT00940000156615 #37
Mus_A	ANCESTRAL SPECIES	11	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a.b #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35	ENSGT00940000154818.a.a #36	ENSGT00940000156615 #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a.b #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35	ENSGT00940000154818.a.a #36	ENSGT00940000156615 #37
Mus_C	ANCESTRAL SPECIES	7	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a.b #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35	ENSGT00940000154818.a.a #36	ENSGT00940000156615 #37
Steppe mouse	MODERN SPECIES	2939			Mybpc1 (ENSMSIG00000018042) #10	Spic (ENSMSIG00000018013) #11	ENSMSIG00000017992 #12	ENSMSIG00000017985	Utp20 (ENSMSIG00000017862) #14	ENSMSIG00000017854	Slc5a8 (ENSMSIG00000017818) #15	Ano4 (ENSMSIG00000017553) #16	Gas2l3 (ENSMSIG00000017395) #17	Nr1h4 (ENSMSIG00000017294) #18	Slc17a8 (ENSMSIG00000017267) #19	Scyl2 (ENSMSIG00000017210) #20	Actr6 (ENSMSIG00000017172) #21	Uhrf1bp1l (ENSMSIG00000017125) #22
spretus	MODERN SPECIES	1	Dram1 (MGP_SPRETEiJ_G0016524)	Gnptab (MGP_SPRETEiJ_G0016525) #7	Sycp3 (MGP_SPRETEiJ_G0016526) #8	MGP_SPRETEiJ_G0016527 #9	Mybpc1 (MGP_SPRETEiJ_G0016528) #10	Spic (MGP_SPRETEiJ_G0016529) #11	Arl1 (MGP_SPRETEiJ_G0016530) #13	Utp20 (MGP_SPRETEiJ_G0016531) #14	Slc5a8 (MGP_SPRETEiJ_G0016532) #15	Ano4 (MGP_SPRETEiJ_G0016533) #16	Gas2l3 (MGP_SPRETEiJ_G0016534) #17	Nr1h4 (MGP_SPRETEiJ_G0016535) #18	Slc17a8 (MGP_SPRETEiJ_G0016536) #19	Scyl2 (MGP_SPRETEiJ_G0016537) #20	Actr6 (MGP_SPRETEiJ_G0016538) #21	Uhrf1bp1l (MGP_SPRETEiJ_G0016539) #22	Anks1b (MGP_SPRETEiJ_G0016540) #23	Apaf1 (MGP_SPRETEiJ_G0016541) #24	Ikbip (MGP_SPRETEiJ_G0016542) #25	Slc25a3 (MGP_SPRETEiJ_G0016543) #26	Tmpo (MGP_SPRETEiJ_G0016544) #27	Nedd1 (MGP_SPRETEiJ_G0016545) #28	Cfap54 (MGP_SPRETEiJ_G0016546) #29	Cdk17 (MGP_SPRETEiJ_G0016547) #30	Elk3 (MGP_SPRETEiJ_G0016548) #31	Lta4h (MGP_SPRETEiJ_G0016549) #32	Hal (MGP_SPRETEiJ_G0016550) #33	Amdhd1 (MGP_SPRETEiJ_G0016551) #34	Ccdc38 (MGP_SPRETEiJ_G0016552) #35	Snrpf (MGP_SPRETEiJ_G0016553) #36	MGP_SPRETEiJ_G0016554
Mouse	MODERN SPECIES	1	Dram1 (ENSMUSG00000020057)	Gnptab (ENSMUSG00000035311) #7	Chpt1 (ENSMUSG00000060002) #9	Sycp3 (ENSMUSG00000020059) #8	Mybpc1 (ENSMUSG00000020061) #10	Spic (ENSMUSG00000004359) #11	Arl1 (ENSMUSG00000060904) #13	Utp20 (ENSMUSG00000004356) #14	Slc5a8 (ENSMUSG00000020062) #15	Ano4 (ENSMUSG00000035189) #16	Gas2l3 (ENSMUSG00000074802) #17	Nr1h4 (ENSMUSG00000047638) #18	Slc17a8 (ENSMUSG00000019935) #19	Scyl2 (ENSMUSG00000069539) #20	Actr6 (ENSMUSG00000019948) #21	Uhrf1bp1l (ENSMUSG00000019951) #22	Anks1b (ENSMUSG00000058589) #23	Apaf1 (ENSMUSG00000019979) #24	Ikbip (ENSMUSG00000019975) #25	Slc25a3 (ENSMUSG00000061904) #26	Tmpo (ENSMUSG00000019961) #27	Nedd1 (ENSMUSG00000019988) #28	Cfap54 (ENSMUSG00000020014) #29	Cdk17 (ENSMUSG00000020015) #30	Elk3 (ENSMUSG00000008398) #31	Lta4h (ENSMUSG00000015889) #32	Hal (ENSMUSG00000020017) #33	Amdhd1 (ENSMUSG00000015890) #34	Ccdc38 (ENSMUSG00000036168) #35	Snrpf (ENSMUSG00000020018) #36	Ntn4 (ENSMUSG00000020019) #37
Ryukyu mouse	MODERN SPECIES	1	Dram1 (MGP_CAROLIEiJ_G0015706)	Gnptab (MGP_CAROLIEiJ_G0015707) #7	Chpt1 (MGP_CAROLIEiJ_G0015708) #9	Sycp3 (MGP_CAROLIEiJ_G0015709) #8	Mybpc1 (MGP_CAROLIEiJ_G0015710) #10	MGP_CAROLIEiJ_G0015711 #11	Arl1 (MGP_CAROLIEiJ_G0015712) #13	Utp20 (MGP_CAROLIEiJ_G0015713) #14	Slc5a8 (MGP_CAROLIEiJ_G0015714) #15	Ano4 (MGP_CAROLIEiJ_G0015715) #16	Gas2l3 (MGP_CAROLIEiJ_G0015716) #17	Nr1h4 (MGP_CAROLIEiJ_G0015717) #18	Slc17a8 (MGP_CAROLIEiJ_G0015718) #19	Scyl2 (MGP_CAROLIEiJ_G0015719) #20	Actr6 (MGP_CAROLIEiJ_G0015720) #21	Uhrf1bp1l (MGP_CAROLIEiJ_G0015721) #22	Anks1b (MGP_CAROLIEiJ_G0015722) #23	Apaf1 (MGP_CAROLIEiJ_G0015723) #24	Ikbip (MGP_CAROLIEiJ_G0015724) #25	Slc25a3 (MGP_CAROLIEiJ_G0015725) #26	MGP_CAROLIEiJ_G0015726 ##27	Nedd1 (MGP_CAROLIEiJ_G0015727) #28	Cfap54 (MGP_CAROLIEiJ_G0015728) #29	Cdk17 (MGP_CAROLIEiJ_G0015729) #30	Elk3 (MGP_CAROLIEiJ_G0015730) #31	Lta4h (MGP_CAROLIEiJ_G0015731) #32	Hal (MGP_CAROLIEiJ_G0015732) #33	Amdhd1 (MGP_CAROLIEiJ_G0015733) #34	Ccdc38 (MGP_CAROLIEiJ_G0015734) #35	Snrpf (MGP_CAROLIEiJ_G0015735) #36	Ntn4 (MGP_CAROLIEiJ_G0015736) #37
Shrew mouse	MODERN SPECIES	22	Dram1 (MGP_PahariEiJ_G0031379)	Gnptab (MGP_PahariEiJ_G0031378) #7	Sycp3 (MGP_PahariEiJ_G0031377) #8	MGP_PahariEiJ_G0031376 #9	Mybpc1 (MGP_PahariEiJ_G0031375) #10	Spic (MGP_PahariEiJ_G0031374) #11	Arl1 (MGP_PahariEiJ_G0031373) #13	Utp20 (MGP_PahariEiJ_G0031372) #14	Slc5a8 (MGP_PahariEiJ_G0031371) #15	Ano4 (MGP_PahariEiJ_G0031370) #16	Gas2l3 (MGP_PahariEiJ_G0031369) #17	Nr1h4 (MGP_PahariEiJ_G0031368) #18	Slc17a8 (MGP_PahariEiJ_G0031367) #19	Scyl2 (MGP_PahariEiJ_G0031366) #20	Actr6 (MGP_PahariEiJ_G0031365) #21	Uhrf1bp1l (MGP_PahariEiJ_G0031364) #22	Anks1b (MGP_PahariEiJ_G0031363) #23	Apaf1 (MGP_PahariEiJ_G0031362) #24	Ikbip (MGP_PahariEiJ_G0031361) #25	Slc25a3 (MGP_PahariEiJ_G0031360) #26	Tmpo (MGP_PahariEiJ_G0031359) #27	Nedd1 (MGP_PahariEiJ_G0031358) #28	Cfap54 (MGP_PahariEiJ_G0031357) #29	Cdk17 (MGP_PahariEiJ_G0031356) #30	Elk3 (MGP_PahariEiJ_G0031355) #31	Lta4h (MGP_PahariEiJ_G0031354) #32	Hal (MGP_PahariEiJ_G0031353) #33	MGP_PahariEiJ_G0031352 #34	Ccdc38 (MGP_PahariEiJ_G0031351) #35	Snrpf (MGP_PahariEiJ_G0031350) #36	MGP_PahariEiJ_G0031349
Rat	MODERN SPECIES	17	Spic (ENSRNOG00000005720) #11	Rps12l4 (ENSRNOG00000043412) #12	Arl1 (ENSRNOG00000005763) #13	Utp20 (ENSRNOG00000005823) #14	Slc5a8 (ENSRNOG00000006367) #15	Ano4 (ENSRNOG00000006841) #16	AABR07056556.1 (ENSRNOG00000032424)	LOC103692829 (ENSRNOG00000061320)	Gas2l3 (ENSRNOG00000063755) #17	Nr1h4 (ENSRNOG00000007197) #18	ENSRNOG00000068987	Slc17a8 (ENSRNOG00000007581) #19	Scyl2 (ENSRNOG00000024955) #20	Actr6 (ENSRNOG00000007875) #21	ENSRNOG00000065049	Bltp3b (ENSRNOG00000050317) #22	Anks1b (ENSRNOG00000024870) #23	Apaf1 (ENSRNOG00000008022) #24	Ikbip (ENSRNOG00000008247) #25	Tmpo (ENSRNOG00000008797) #26	ENSRNOG00000064198	AABR07056611.1 (ENSRNOG00000055726)	Nedd1 (ENSRNOG00000004011) #28	Cfap54 (ENSRNOG00000024494) #29	Cdk17 (ENSRNOG00000004148) #30	Elk3 (ENSRNOG00000004367) #31	Lta4h (ENSRNOG00000004494) #32	Hal (ENSRNOG00000004502) #33	Amdhd1 (ENSRNOG00000005266) #34	Ccdc38 (ENSRNOG00000021892) #35	Snrpf (ENSRNOG00000005556) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1572												Slc17a8 (ENSNGAG00000013808) #19	ENSNGAG00000014156	ENSNGAG00000014516 #20	Actr6 (ENSNGAG00000014912) #21	Uhrf1bp1l (ENSNGAG00000016616) #22	ENSNGAG00000017932 #23
Lesser Egyptian jerboa	MODERN SPECIES	42	Washc3 (ENSJJAG00000019930)	Dram1 (ENSJJAG00000023953)	ENSJJAG00000022706 #7	Sycp3 (ENSJJAG00000017653) #8	ENSJJAG00000001967 #9	Mybpc1 (ENSJJAG00000020768) #10	ENSJJAG00000020719 #13	Utp20 (ENSJJAG00000019321) #14	Slc5a8 (ENSJJAG00000018761) #15	Ano4 (ENSJJAG00000021544) #16	ENSJJAG00000017605 #17	Nr1h4 (ENSJJAG00000017445) #18	Slc17a8 (ENSJJAG00000016274) #19	ENSJJAG00000014007 #20	Actr6 (ENSJJAG00000012412) #21	Uhrf1bp1l (ENSJJAG00000023679) #22	ENSJJAG00000018878 #23	ENSJJAG00000023848 #23	Apaf1 (ENSJJAG00000014169) #24	ENSJJAG00000017372 #25	Slc25a3 (ENSJJAG00000013339) #26	Tmpo (ENSJJAG00000018127) #27	Nedd1 (ENSJJAG00000010994) #28	ENSJJAG00000017399	ENSJJAG00000014966	Cdk17 (ENSJJAG00000013291) #30	Elk3 (ENSJJAG00000010853) #31	Lta4h (ENSJJAG00000011318) #32	Hal (ENSJJAG00000010741) #33	Amdhd1 (ENSJJAG00000010274) #34	Ccdc38 (ENSJJAG00000013539) #35
Kangaroo rat	MODERN SPECIES	322	Dram1 (ENSDORG00000003107)	Gnptab (ENSDORG00000023503) #7	ENSDORG00000004032 #8	Chpt1 (ENSDORG00000004030) #9	Mybpc1 (ENSDORG00000004026) #10	Spic (ENSDORG00000003709) #11	Arl1 (ENSDORG00000014770) #13	Utp20 (ENSDORG00000014762) #14	Slc5a8 (ENSDORG00000013252) #15	Ano4 (ENSDORG00000001013) #16	ENSDORG00000001225 #17	Nr1h4 (ENSDORG00000001224) #18	Slc17a8 (ENSDORG00000029543) #19	ENSDORG00000003101 #20	Actr6 (ENSDORG00000012723) #21	Uhrf1bp1l (ENSDORG00000024278) #22	ENSDORG00000028031 #23	ENSDORG00000009254 #23	Apaf1 (ENSDORG00000009253) #24	Ikbip (ENSDORG00000011434) #25	Slc25a3 (ENSDORG00000011431) #26	ENSDORG00000023396 ##27	ENSDORG00000027259	Nedd1 (ENSDORG00000001204) #28	ENSDORG00000026947	ENSDORG00000025279	ENSDORG00000005572	ENSDORG00000025108	Cdk17 (ENSDORG00000014799) #30	Elk3 (ENSDORG00000025916) #31	Lta4h (ENSDORG00000001735) #32
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000163320	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000164546	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35	ENSGT00940000154818.a.b ##36	ENSGT00940000156615 #37
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35	ENSGT00940000154818.a.b ##36	ENSGT00940000156615 #37
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118.y.a #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35	ENSGT00940000154818.a.a #36	ENSGT00940000156615 #37
Degu	MODERN SPECIES	45	CHPT1 (ENSODEG00000011230) #9	MYBPC1 (ENSODEG00000012077) #10	ENSODEG00000010424	SPIC (ENSODEG00000010078) #11	ENSODEG00000010531 #13	UTP20 (ENSODEG00000013411) #14	SLC5A8 (ENSODEG00000010696) #15	ENSODEG00000010202	ANO4 (ENSODEG00000011009) #16	ENSODEG00000009780	ENSODEG00000010407 #17	NR1H4 (ENSODEG00000012027) #18	SLC17A8 (ENSODEG00000010869) #19	ENSODEG00000011114 #20	ENSODEG00000010649 #21	BLTP3B (ENSODEG00000010196) #22	ENSODEG00000011572	ENSODEG00000010669 #23	ENSODEG00000010991	ENSODEG00000010573	ENSODEG00000010313 #23	ENSODEG00000019813	APAF1 (ENSODEG00000010122) #24	ENSODEG00000010948 #25	SLC25A3 (ENSODEG00000009995) #26	ENSODEG00000013377 #27	ENSODEG00000019648	ENSODEG00000019742	ENSODEG00000010263	ENSODEG00000012494	ENSODEG00000011590
Long-tailed chinchilla	MODERN SPECIES	112	GNPTAB (ENSCLAG00000007404) #7	SYCP3 (ENSCLAG00000006962) #8	ENSCLAG00000012024 #9	MYBPC1 (ENSCLAG00000006936) #10	SPIC (ENSCLAG00000016048) #11	ARL1 (ENSCLAG00000008180) #13	UTP20 (ENSCLAG00000011569) #14	SLC5A8 (ENSCLAG00000009574) #15	ANO4 (ENSCLAG00000014090) #16	GAS2L3 (ENSCLAG00000007654) #17	NR1H4 (ENSCLAG00000012775) #18	ENSCLAG00000015655	SLC17A8 (ENSCLAG00000011320) #19	SCYL2 (ENSCLAG00000010496) #20	ACTR6 (ENSCLAG00000007878) #21	BLTP3B (ENSCLAG00000012501) #22	ENSCLAG00000009179	ANKS1B (ENSCLAG00000009661) #23	APAF1 (ENSCLAG00000009227) #24	IKBIP (ENSCLAG00000008628) #25	SLC25A3 (ENSCLAG00000007243) #26	TMPO (ENSCLAG00000007244) ##27	ENSCLAG00000007083	NEDD1 (ENSCLAG00000013064) #28	CFAP54 (ENSCLAG00000008151) #29	CDK17 (ENSCLAG00000012821) #30	ELK3 (ENSCLAG00000014957) #31	Lta4h (ENSCLAG00000011828) #32	HAL (ENSCLAG00000009969) #33	AMDHD1 (ENSCLAG00000010790) #34	CCDC38 (ENSCLAG00000008219) #35
Guinea pig	MODERN SPECIES	9	ENSCPOG00000034099	GNPTAB (ENSCPOG00000022501) #7	SYCP3 (ENSCPOG00000001202) #8	CHPT1 (ENSCPOG00000001199) #9	MYBPC1 (ENSCPOG00000011180) #10	SPIC (ENSCPOG00000007301) #11	ARL1 (ENSCPOG00000026014) #13	UTP20 (ENSCPOG00000003129) #14	SLC5A8 (ENSCPOG00000010055) #15	ANO4 (ENSCPOG00000008963) #16	GAS2L3 (ENSCPOG00000036868) #17	NR1H4 (ENSCPOG00000002168) #18	SLC17A8 (ENSCPOG00000009083) #19	SCYL2 (ENSCPOG00000015459) #20	ACTR6 (ENSCPOG00000024022) #21	BLTP3B (ENSCPOG00000009379) #22	ANKS1B (ENSCPOG00000015197) #23	APAF1 (ENSCPOG00000015196) #24	IKBIP (ENSCPOG00000040634) #25	SLC25A3 (ENSCPOG00000011606) #26	TMPO (ENSCPOG00000011604) ##27	ENSCPOG00000004978	NEDD1 (ENSCPOG00000009631) #28	CFAP54 (ENSCPOG00000009624) #29	CDK17 (ENSCPOG00000005070) #30	ELK3 (ENSCPOG00000005065) #31	LTA4H (ENSCPOG00000013048) #32	HAL (ENSCPOG00000013043) #33	AMDHD1 (ENSCPOG00000001031) #34	CCDC38 (ENSCPOG00000013904) #35	ENSCPOG00000013898 ##36
Naked mole-rat female	MODERN SPECIES	8	SYCP3 (ENSHGLG00000004845) #8	ENSHGLG00000005709 #9	ENSHGLG00000039302	ENSHGLG00000050337 #10	SPIC (ENSHGLG00000039584) #11	ENSHGLG00000044877	ENSHGLG00000046315 #13	SLC5A8 (ENSHGLG00000008465) #15	ANO4 (ENSHGLG00000010936) #16	ENSHGLG00000039506	ENSHGLG00000006370	NR1H4 (ENSHGLG00000038152) #18	SLC17A8 (ENSHGLG00000004252) #19	SCYL2 (ENSHGLG00000004458) #20	ACTR6 (ENSHGLG00000006255) #21	BLTP3B (ENSHGLG00000008977) #22	ENSHGLG00000041800 #23	ENSHGLG00000016527 #23	APAF1 (ENSHGLG00000007198) #24	ENSHGLG00000049820	IKBIP (ENSHGLG00000047603) #25	ENSHGLG00000008601 #26	ENSHGLG00000010848 #27	ENSHGLG00000032527	ENSHGLG00000037736	NEDD1 (ENSHGLG00000012733) #28	ENSHGLG00000011260	CFAP54 (ENSHGLG00000004618) #29	ENSHGLG00000006066 #30	ELK3 (ENSHGLG00000008439) #31	ENSHGLG00000044737
Sciuridae	ANCESTRAL SPECIES	14	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000163320	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000164546	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34
Marmotini	ANCESTRAL SPECIES	4	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a.e #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000163320	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000164546	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00940000155067.a.e #11	ENSGT00940000155118 #13	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000163320	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35	ENSGT00940000154818.a.a #36
Arctic ground squirrel	MODERN SPECIES	6	DRAM1 (ENSUPAG00010002927)	GNPTAB (ENSUPAG00010002938) #7	SYCP3 (ENSUPAG00010002966) #8	CHPT1 (ENSUPAG00010002983) #9	MYBPC1 (ENSUPAG00010002997) #10	ARL1 (ENSUPAG00010003075) #13	UTP20 (ENSUPAG00010003081) #14	SLC5A8 (ENSUPAG00010003154) #15	ANO4 (ENSUPAG00010003185) #16	ENSUPAG00010003346	GAS2L3 (ENSUPAG00010003356) #17	NR1H4 (ENSUPAG00010003387) #18	SLC17A8 (ENSUPAG00010003443) #19	SCYL2 (ENSUPAG00010003458) #20	ACTR6 (ENSUPAG00010003498) #21	BLTP3B (ENSUPAG00010003512) #22	ANKS1B (ENSUPAG00010003556) #23	GARIN6 (ENSUPAG00010005992)	APAF1 (ENSUPAG00010006002) #24	IKBIP (ENSUPAG00010006055) #25	SLC25A3 (ENSUPAG00010006073) #26	ENSUPAG00010006109 #27	NEDD1 (ENSUPAG00010006247) #28	CFAP54 (ENSUPAG00010006280) #29	CDK17 (ENSUPAG00010006388) #30	ENSUPAG00010006422	ELK3 (ENSUPAG00010006425) #31	LTA4H (ENSUPAG00010006436) #32	HAL (ENSUPAG00010006474) #33	AMDHD1 (ENSUPAG00010006490) #34	CCDC38 (ENSUPAG00010006493) #35
Squirrel	MODERN SPECIES	92	DRAM1 (ENSSTOG00000001865)	GNPTAB (ENSSTOG00000001855) #7	SYCP3 (ENSSTOG00000001853) #8	CHPT1 (ENSSTOG00000011736) #9	MYBPC1 (ENSSTOG00000003034) #10	ENSSTOG00000015457 #11	ARL1 (ENSSTOG00000016022) #13	UTP20 (ENSSTOG00000015995) #14	SLC5A8 (ENSSTOG00000016289) #15	ANO4 (ENSSTOG00000016283) #16	GAS2L3 (ENSSTOG00000011780) #17	NR1H4 (ENSSTOG00000011771) #18	SLC17A8 (ENSSTOG00000011763) #19	SCYL2 (ENSSTOG00000011753) #20	ACTR6 (ENSSTOG00000004895) #21	BLTP3B (ENSSTOG00000004850) #22	ANKS1B (ENSSTOG00000012238) #23	APAF1 (ENSSTOG00000028539) #24	IKBIP (ENSSTOG00000026100) #25	SLC25A3 (ENSSTOG00000027633) #26	TMPO (ENSSTOG00000009169) ##27
Alpin marmot	MODERN SPECIES	11	DRAM1 (ENSMMMG00000017688)	GNPTAB (ENSMMMG00000017694) #7	SYCP3 (ENSMMMG00000017715) #8	CHPT1 (ENSMMMG00000017731) #9	MYBPC1 (ENSMMMG00000017763) #10	SPIC (ENSMMMG00000017812) #11	ARL1 (ENSMMMG00000017821) #13	UTP20 (ENSMMMG00000017841) #14	SLC5A8 (ENSMMMG00000017894) #15	ANO4 (ENSMMMG00000017942) #16	GAS2L3 (ENSMMMG00000018095) #17	NR1H4 (ENSMMMG00000018110) #18	SLC17A8 (ENSMMMG00000018190) #19	SCYL2 (ENSMMMG00000018205) #20	ACTR6 (ENSMMMG00000018236) #21	BLTP3B (ENSMMMG00000018268) #22	ANKS1B (ENSMMMG00000018366) #23	GARIN6 (ENSMMMG00000019762)	ENSMMMG00000019768	APAF1 (ENSMMMG00000019774) #24	IKBIP (ENSMMMG00000019840) #25	SLC25A3 (ENSMMMG00000019846) #26	ENSMMMG00000019863 #27	NEDD1 (ENSMMMG00000019953) #28	ENSMMMG00000019958	ENSMMMG00000019968	CDK17 (ENSMMMG00000019989) #30	ELK3 (ENSMMMG00000020001) #31	LTA4H (ENSMMMG00000020008) #32	HAL (ENSMMMG00000020025) #33	AMDHD1 (ENSMMMG00000020040) #34
Eurasian red squirrel	MODERN SPECIES	14	GNPTAB (ENSSVLG00005008675) #7	SYCP3 (ENSSVLG00005008597) #8	CHPT1 (ENSSVLG00005008570) #9	MYBPC1 (ENSSVLG00005007401) #10	ENSSVLG00005007121 #11	ARL1 (ENSSVLG00005007015) #13	UTP20 (ENSSVLG00005010358) #14	ENSSVLG00005010295	SLC5A8 (ENSSVLG00005010200) #15	ANO4 (ENSSVLG00005009692) #16	GAS2L3 (ENSSVLG00005009544) #17	NR1H4 (ENSSVLG00005009339) #18	SLC17A8 (ENSSVLG00005009180) #19	ENSSVLG00005008897 #20	ACTR6 (ENSSVLG00005008778) #21	BLTP3B (ENSSVLG00005008712) #22	ENSSVLG00005008665	ENSSVLG00005008635	GARIN6 (ENSSVLG00005008609)	ANKS1B (ENSSVLG00005007585) #23	ENSSVLG00005007229	APAF1 (ENSSVLG00005006518) #24	IKBIP (ENSSVLG00005006279) #25	ENSSVLG00005006115 #26	ENSSVLG00005006011 #27	NEDD1 (ENSSVLG00005005868) #28	ENSSVLG00005005829	ENSSVLG00005005778	ENSSVLG00005005745 #30	ELK3 (ENSSVLG00005005685) #31	LTA4H (ENSSVLG00005005473) #32
Lagomorpha	ANCESTRAL SPECIES	22	ENSGT00390000014084	ENSGT01030000234578.B.a	ENSGT00390000006747 #7	ENSGT00390000000062.x.a #8	ENSGT00950000183117.a.a #9	ENSGT00940000158254 #10	ENSGT00390000016813 #14	ENSGT00940000155166.A #15	ENSGT00940000158600 #16	ENSGT00940000159389 #17	ENSGT00940000158037 #18	ENSGT00940000158187 #19	ENSGT00880000138031 #20	ENSGT00950000182976.a.a	ENSGT00720000108833 #21	ENSGT00600000084428.b #22	ENSGT00940000162770	ENSGT00940000154572.`c #23	ENSGT00940000157710 #24	ENSGT00500000045001 #25	ENSGT00390000008708 #26	ENSGT00940000154098.a.d #27	ENSGT00390000001561 #28	ENSGT00940000162446 #29	ENSGT00940000162970	ENSGT00940000155834 #30	ENSGT00940000157129 #31	ENSGT00940000156375 #32	ENSGT00390000009047.b #33	ENSGT00390000008645 #34	ENSGT00940000153110.B #35
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	15	ENSOCUG00000030138	ENSOCUG00000029302	ARL1 (ENSOCUG00000002217) #13	UTP20 (ENSOCUG00000010475) #14	ENSOCUG00000037051	SLC5A8 (ENSOCUG00000003486) #15	ENSOCUG00000036878	ANO4 (ENSOCUG00000000881) #16	ENSOCUG00000033171	GAS2L3 (ENSOCUG00000007182) #17	NR1H4 (ENSOCUG00000007177) #18	SLC17A8 (ENSOCUG00000015995) #19	SCYL2 (ENSOCUG00000009146) #20	ENSOCUG00000024669	ACTR6 (ENSOCUG00000000141) #21	ENSOCUG00000017132 #22	ENSOCUG00000032944 #22	ENSOCUG00000011887	ANKS1B (ENSOCUG00000029510) #23	APAF1 (ENSOCUG00000011860) #24	IKBIP (ENSOCUG00000011854) #25	SLC25A3 (ENSOCUG00000011847) #26	ENSOCUG00000012692 #27	NEDD1 (ENSOCUG00000010944) #28	CFAP54 (ENSOCUG00000013917) #29	CDK17 (ENSOCUG00000013583) #30	ELK3 (ENSOCUG00000034370) #31	LTA4H (ENSOCUG00000005535) #32	HAL (ENSOCUG00000005528) #33	AMDHD1 (ENSOCUG00000005523) #34	CCDC38 (ENSOCUG00000010931) #35
Rabbit	MODERN SPECIES	15	ENSOCUG00000029302	ARL1 (ENSOCUG00000002217) #13	UTP20 (ENSOCUG00000010475) #14	ENSOCUG00000037051	SLC5A8 (ENSOCUG00000003486) #15	ENSOCUG00000036878	ANO4 (ENSOCUG00000000881) #16	ENSOCUG00000033171	GAS2L3 (ENSOCUG00000007182) #17	NR1H4 (ENSOCUG00000007177) #18	SLC17A8 (ENSOCUG00000015995) #19	SCYL2 (ENSOCUG00000009146) #20	ENSOCUG00000024669	ACTR6 (ENSOCUG00000000141) #21	ENSOCUG00000017132 #22	ENSOCUG00000032944 #22	ENSOCUG00000011887	ANKS1B (ENSOCUG00000029510) #23	APAF1 (ENSOCUG00000011860) #24	IKBIP (ENSOCUG00000011854) #25	SLC25A3 (ENSOCUG00000011847) #26	ENSOCUG00000012692 #27	NEDD1 (ENSOCUG00000010944) #28	CFAP54 (ENSOCUG00000013917) #29	CDK17 (ENSOCUG00000013583) #30	ELK3 (ENSOCUG00000034370) #31	LTA4H (ENSOCUG00000005535) #32	HAL (ENSOCUG00000005528) #33	AMDHD1 (ENSOCUG00000005523) #34	CCDC38 (ENSOCUG00000010931) #35	SNRPF (ENSOCUG00000010925) #36
Pika	MODERN SPECIES	653																BLTP3B (ENSOPRG00000008577) #22	ANKS1B (ENSOPRG00000008537) #23	APAF1 (ENSOPRG00000008510) #24