Muroidea	ANCESTRAL SPECIES	8	ENSGT00940000155281	ENSGT00940000166821.a	ENSGT00940000163221	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280	ENSGT00940000155757	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935	ENSGT00940000161119	ENSGT00530000063891	ENSGT00940000159119.b #18	ENSGT00390000003759 #20	ENSGT00390000007809.b #21	ENSGT00940000153458.A #22	ENSGT00940000160059.a.a #23	ENSGT00940000156321 #24	ENSGT00940000154205.h #25	ENSGT00960000189764.a
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00940000158227	ENSGT00940000155281	ENSGT00940000163221	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280	ENSGT00940000155757	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935	ENSGT00940000161119	ENSGT00530000063891	ENSGT00940000159119.b #18	ENSGT00390000003759 #20	ENSGT00390000007809.b #21	ENSGT00940000153458.A #22	ENSGT00940000160059.a.a #23	ENSGT00940000156321 #24	ENSGT00940000154205.h #25	ENSGT00390000000878 #30	ENSGT00390000014833	ENSGT00390000011295.b	ENSGT00940000155602	ENSGT00390000000118	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b	ENSGT00770000120611.B
Murinae	ANCESTRAL SPECIES	31	ENSGT00940000158227	ENSGT00940000155281	ENSGT00940000163221	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280	ENSGT00940000155757	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935	ENSGT00940000161119	ENSGT00530000063891	ENSGT00940000159119.b #18	ENSGT00390000003759 #20	ENSGT00390000007809.b #21	ENSGT00940000153458.A #22	ENSGT00940000160059.a.a #23	ENSGT00940000156321 #24	ENSGT00940000154205.h #25	ENSGT00390000000878 #30
Mus	ANCESTRAL SPECIES	24	ENSGT00940000158227	ENSGT00940000155281	ENSGT00940000163221	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280	ENSGT00940000155757	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935	ENSGT00940000161119	ENSGT00530000063891	ENSGT00940000159119.b #18	ENSGT00390000003759 #20	ENSGT00390000007809.b #21	ENSGT00940000153458.A #22	ENSGT00940000160059.a.a #23	ENSGT00940000156321 #24	ENSGT00860000136054 #26	ENSGT00940000154205.h #25	ENSGT00390000000878 #30	ENSGT00390000014786 #31
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000158227	ENSGT00940000155281	ENSGT00940000163221	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280	ENSGT00940000155757	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935	ENSGT00940000161119	ENSGT00530000063891	ENSGT00940000159119.b #18	ENSGT00390000003759 #20	ENSGT00390000007809.b #21	ENSGT00940000153458.A #22	ENSGT00940000160059.a.a #23	ENSGT00940000156321 #24	ENSGT00860000136054 #26	ENSGT00940000154205.h #25	ENSGT00390000000878 #30	ENSGT00390000014786 #31	ENSGT00700000106164 #32	ENSGT00530000063834.e.b #33	ENSGT00940000154677 #34	ENSGT01030000234626.A.b #35	ENSGT00940000161541 #36	ENSGT00950000183117.b #37	ENSGT00940000153804.A	ENSGT00940000155086.C	ENSGT00390000018634
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000158227	ENSGT00940000155281	ENSGT00940000163221	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280	ENSGT00940000155757	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935	ENSGT00940000161119	ENSGT00530000063891	ENSGT00940000159119.b #18	ENSGT00390000003759 #20	ENSGT00390000007809.b #21	ENSGT00940000153458.A #22	ENSGT00940000160059.a.a #23	ENSGT00940000156321 #24	ENSGT00860000136054 #26	ENSGT00940000154205.h #25	ENSGT00390000000878 #30	ENSGT00390000014786 #31	ENSGT00700000106164 #32	ENSGT00530000063834.e.b #33	ENSGT00940000154677 #34	ENSGT01030000234626.A.b #35	ENSGT00940000161541 #36	ENSGT00950000183117.b #37	ENSGT00940000153804.A	ENSGT00940000155086.C	ENSGT00390000018634
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000158227	ENSGT00940000155281	ENSGT00940000163221	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280	ENSGT00940000155757	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935	ENSGT00940000161119	ENSGT00530000063891	ENSGT00940000159119.b #18	ENSGT00390000003759 #20	ENSGT00390000007809.b #21	ENSGT00940000153458.A #22	ENSGT00940000160059.a.a #23	ENSGT00940000156321 #24	ENSGT00860000136054 #26	ENSGT00940000154205.h #25	ENSGT00390000000878 #30	ENSGT00390000014786 #31	ENSGT00700000106164 #32	ENSGT00530000063834.e.b #33	ENSGT00940000154677 #34	ENSGT01030000234626.A.b #35	ENSGT00940000161541 #36	ENSGT00950000183117.b #37	ENSGT00940000153804.A	ENSGT00940000155086.C	ENSGT00390000018634
Steppe mouse	MODERN SPECIES	15												Shh (ENSMSIG00000012010) #18	ENSMSIG00000012025 #19	Rnf32 (ENSMSIG00000012044) #20	Lmbr1 (ENSMSIG00000012080) #21	Nom1 (ENSMSIG00000012221) #22	Mnx1 (ENSMSIG00000012250) #23	Ube3c (ENSMSIG00000012285) #24	ENSMSIG00000012364 #25	ENSMSIG00000012602 #26	ENSMSIG00000012609 #27	Rfk (ENSMSIG00000012617) #28	ENSMSIG00000012620 #29	Il6 (ENSMSIG00000012630) #30	Tyms (ENSMSIG00000012655) #31	ENSMSIG00000012679 #32	Garem2 (ENSMSIG00000012700) #33	Hadha (ENSMSIG00000012707) #34	Hadhb (ENSMSIG00000012773) #35	Adgrf3 (ENSMSIG00000012893) #36	Selenoi (ENSMSIG00000012932) #37
spretus	MODERN SPECIES	14	E130116L18Rik (MGP_SPRETEiJ_G0028024)	Kmt2c (MGP_SPRETEiJ_G0028025)	Cct8l1 (MGP_SPRETEiJ_G0028026)	Xrcc2 (MGP_SPRETEiJ_G0028027)	Actr3b (MGP_SPRETEiJ_G0028028)	Dpp6 (MGP_SPRETEiJ_G0028029)	Paxip1 (MGP_SPRETEiJ_G0028030)	Htr5a (MGP_SPRETEiJ_G0028031)	Insig1 (MGP_SPRETEiJ_G0028032)	En2 (MGP_SPRETEiJ_G0028033)	MGP_SPRETEiJ_G0028034	Rbm33 (MGP_SPRETEiJ_G0028035)	Shh (MGP_SPRETEiJ_G0028036) #18	MGP_SPRETEiJ_G0028037 #20	Lmbr1 (MGP_SPRETEiJ_G0028038) #21	MGP_SPRETEiJ_G0028039 #22	Mnx1 (MGP_SPRETEiJ_G0028040) #23	MGP_SPRETEiJ_G0028041 #24	MGP_SPRETEiJ_G0028042 #26	MGP_SPRETEiJ_G0028043 #25	Il6 (MGP_SPRETEiJ_G0028044) #30	MGP_SPRETEiJ_G0028045 #31	MGP_SPRETEiJ_G0028046 #32	Garem2 (MGP_SPRETEiJ_G0028047) #33	Hadha (MGP_SPRETEiJ_G0028048) #34	Hadhb (MGP_SPRETEiJ_G0028049) #35	Adgrf3 (MGP_SPRETEiJ_G0028050) #36	Selenoi (MGP_SPRETEiJ_G0028051) #37	Drc1 (MGP_SPRETEiJ_G0028052)	Otof (MGP_SPRETEiJ_G0028053)	Fam166c (MGP_SPRETEiJ_G0028054)
Mouse	MODERN SPECIES	14	Gm10471 (ENSMUSG00000073116)	5031410I06Rik (ENSMUSG00000051940)	Gm10220 (ENSMUSG00000067698)	Gm7361 (ENSMUSG00000059645)	Dpp6 (ENSMUSG00000061576)	Speer4b (ENSMUSG00000048703)	Paxip1 (ENSMUSG00000002221)	Htr5a (ENSMUSG00000039106)	Insig1 (ENSMUSG00000045294)	En2 (ENSMUSG00000039095)	Cnpy1 (ENSMUSG00000044681)	Rbm33 (ENSMUSG00000048271)	Shh (ENSMUSG00000002633) #18	Rnf32 (ENSMUSG00000029130) #20	Lmbr1 (ENSMUSG00000010721) #21	Nom1 (ENSMUSG00000001569) #22	Mnx1 (ENSMUSG00000001566) #23	Ube3c (ENSMUSG00000039000) #24	Dnajb6 (ENSMUSG00000029131) #25	Il6 (ENSMUSG00000025746) #30	Tyms (ENSMUSG00000025747) #31	Garem2 (ENSMUSG00000044576) #33	Hadha (ENSMUSG00000025745) #34	Hadhb (ENSMUSG00000059447) #35	Adgrf3 (ENSMUSG00000067642) #36	Selenoi (ENSMUSG00000075703) #37	Drc1 (ENSMUSG00000073102)	Otof (ENSMUSG00000062372)	Fam166c (ENSMUSG00000029182)	Cib4 (ENSMUSG00000053194)	Kcnk3 (ENSMUSG00000049265)
Ryukyu mouse	MODERN SPECIES	14	Galnt11 (MGP_CAROLIEiJ_G0027027)	E130116L18Rik (MGP_CAROLIEiJ_G0027028)	Kmt2c (MGP_CAROLIEiJ_G0027029)	Cct8l1 (MGP_CAROLIEiJ_G0027030)	Xrcc2 (MGP_CAROLIEiJ_G0027031)	Dpp6 (MGP_CAROLIEiJ_G0027033)	Paxip1 (MGP_CAROLIEiJ_G0027034)	Htr5a (MGP_CAROLIEiJ_G0027035)	Insig1 (MGP_CAROLIEiJ_G0027036)	En2 (MGP_CAROLIEiJ_G0027037)	Cnpy1 (MGP_CAROLIEiJ_G0027038)	Rbm33 (MGP_CAROLIEiJ_G0027039)	Shh (MGP_CAROLIEiJ_G0027040) #18	Rnf32 (MGP_CAROLIEiJ_G0027041) #20	Lmbr1 (MGP_CAROLIEiJ_G0027042) #21	MGP_CAROLIEiJ_G0027043 #22	Mnx1 (MGP_CAROLIEiJ_G0027044) #23	Ube3c (MGP_CAROLIEiJ_G0027045) #24	MGP_CAROLIEiJ_G0027046 #26	MGP_CAROLIEiJ_G0027047 #25	Il6 (MGP_CAROLIEiJ_G0027048) #30	MGP_CAROLIEiJ_G0027049 #31	MGP_CAROLIEiJ_G0027050 #32	Garem2 (MGP_CAROLIEiJ_G0027051) #33	Hadha (MGP_CAROLIEiJ_G0027052) #34	Hadhb (MGP_CAROLIEiJ_G0027053) #35	Adgrf3 (MGP_CAROLIEiJ_G0027054) #36	MGP_CAROLIEiJ_G0027055 #37	Drc1 (MGP_CAROLIEiJ_G0027056)	Otof (MGP_CAROLIEiJ_G0027057)	Fam166c (MGP_CAROLIEiJ_G0027058)
Rat	MODERN SPECIES	14	Cct8l2 (ENSRNOG00000047114)	Rpl10a-ps9 (ENSRNOG00000047067)	AABR07059161.1 (ENSRNOG00000051942)	Xrcc2 (ENSRNOG00000007493)	Actr3b (ENSRNOG00000031855)	Dpp6 (ENSRNOG00000030547)	Paxip1 (ENSRNOG00000007131)	Htr5a (ENSRNOG00000007066)	Insig1 (ENSRNOG00000006859)	En2 (ENSRNOG00000006846)	Cnpy1 (ENSRNOG00000028311)	Rbm33 (ENSRNOG00000006718)	Shh (ENSRNOG00000006120) #18	Rnf32 (ENSRNOG00000005691) #20	Lmbr1 (ENSRNOG00000059589) #21	Nom1 (ENSRNOG00000048969) #22	Mnx1 (ENSRNOG00000046959) #23	LOC681193 (ENSRNOG00000042507)	Ube3c (ENSRNOG00000010702) #24	Dnajb6 (ENSRNOG00000010353) #25	Il6 (ENSRNOG00000010278) #30	ENSRNOG00000067309
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000166821.a	ENSGT00940000166831	ENSGT00940000163221	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280	ENSGT00940000155757	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935	ENSGT00940000161119	ENSGT00530000063891	ENSGT00940000159119.b #18	ENSGT00390000003759 #20	ENSGT00390000007809.b #21	ENSGT00940000153458.A #22	ENSGT00940000160059.a.a #23	ENSGT00940000156321 #24	ENSGT00940000154205.h #25	ENSGT00390000000878 #30	ENSGT00390000014833	ENSGT00390000011295.b	ENSGT00940000155602	ENSGT00390000000118	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b	ENSGT00770000120611.B
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00940000166821.a	ENSGT00940000166831	ENSGT00940000163221	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280	ENSGT00940000155757	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a.i	ENSGT00940000159935	ENSGT00940000161119	ENSGT00530000063891	ENSGT00940000159119.b #18	ENSGT00390000003759 #20	ENSGT00390000007809.b #21	ENSGT00940000153458.A #22	ENSGT00940000160059.a.a #23	ENSGT00940000156321 #24	ENSGT00940000154205.h #25	ENSGT00390000000878 #30	ENSGT00390000014833	ENSGT00390000011295.b	ENSGT00940000155602	ENSGT00390000000118	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT00940000157167	ENSGT00940000153470.a.a.a.b	ENSGT00770000120611.B	ENSGT00390000007287
Golden Hamster	MODERN SPECIES	781	ENSMAUG00000012286	ENSMAUG00000009446	ENSMAUG00000012568	Actr3b (ENSMAUG00000009519)	Dpp6 (ENSMAUG00000007340)	Paxip1 (ENSMAUG00000003325)	Htr5a (ENSMAUG00000001772)	Insig1 (ENSMAUG00000000814)	En2 (ENSMAUG00000018311)	ENSMAUG00000000075	Rbm33 (ENSMAUG00000017332)	Shh (ENSMAUG00000016493) #18	Rnf32 (ENSMAUG00000000042) #20	Lmbr1 (ENSMAUG00000015566) #21	ENSMAUG00000014867	Nom1 (ENSMAUG00000017988) #22	Mnx1 (ENSMAUG00000016323) #23	Ube3c (ENSMAUG00000014156) #24
Chinese hamster chok1gshd	MODERN SPECIES	212	Xrcc2 (ENSCGRG00001014306)	Actr3b (ENSCGRG00001019328)	ENSCGRG00001005137	Dpp6 (ENSCGRG00001021197)	Paxip1 (ENSCGRG00001019392)	Htr5a (ENSCGRG00001010326)	Insig1 (ENSCGRG00001012058)	En2 (ENSCGRG00001019240)	Cnpy1 (ENSCGRG00001022362)	Rbm33 (ENSCGRG00001021677)	Shh (ENSCGRG00001016950) #18	Rnf32 (ENSCGRG00001006621) #20	ENSCGRG00001013740	Lmbr1 (ENSCGRG00001017749) #21	ENSCGRG00001002440	Nom1 (ENSCGRG00001020293) #22	Mnx1 (ENSCGRG00001023539) #23	Ube3c (ENSCGRG00001012001) #24	ENSCGRG00001021591	ENSCGRG00001022947 #25	Il6 (ENSCGRG00001024135) #30	Tomm7 (ENSCGRG00001024471)	ENSCGRG00001000775	Hycc1 (ENSCGRG00001014837)	ENSCGRG00001002267	Nupl2 (ENSCGRG00001019625)	Gpnmb (ENSCGRG00001018141)	Malsu1 (ENSCGRG00001007836)	Igf2bp3 (ENSCGRG00001011804)	Tra2a (ENSCGRG00001019980)	Ccdc126 (ENSCGRG00001011659)
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00940000166821.a	ENSGT00940000166831	ENSGT00940000163221	ENSGT00390000020445	ENSGT00940000158304	ENSGT00940000156280	ENSGT00940000155757	ENSGT01010000222287.B.a.b.a	ENSGT00580000081600.c.a	ENSGT00940000159935	ENSGT00940000161119	ENSGT00530000063891	ENSGT00940000159119.b #18	ENSGT00390000003759 #20	ENSGT00390000007809.b #21	ENSGT00940000153458.A #22	ENSGT00940000160059.a.a #23	ENSGT00940000156321 #24	ENSGT00940000154205.h #25	ENSGT00960000189764.a	ENSGT00960000189710 #29	ENSGT00390000000878 #30	ENSGT00390000014833	ENSGT00390000011295.b	ENSGT00940000155602	ENSGT00390000000118	ENSGT00950000183188.B	ENSGT00390000015035	ENSGT00940000154957.B	ENSGT01030000235027	ENSGT00940000157167
Northern American deer mouse	MODERN SPECIES	16	Kmt2c (ENSPEMG00000030774)	Cct8l1 (ENSPEMG00000026242)	Xrcc2 (ENSPEMG00000019759)	Actr3b (ENSPEMG00000018361)	Dpp6 (ENSPEMG00000025609)	Paxip1 (ENSPEMG00000024228)	Htr5a (ENSPEMG00000030608)	Insig1 (ENSPEMG00000022295)	En2 (ENSPEMG00000027515)	ENSPEMG00000016430	Rbm33 (ENSPEMG00000017918)	Shh (ENSPEMG00000027532) #18	ENSPEMG00000028888	Rnf32 (ENSPEMG00000023063) #20	Lmbr1 (ENSPEMG00000000837) #21	Nom1 (ENSPEMG00000024180) #22	Mnx1 (ENSPEMG00000013095) #23	Ube3c (ENSPEMG00000022332) #24	ENSPEMG00000021036 #25	ENSPEMG00000028907 #29	Il6 (ENSPEMG00000020620) #30	ENSPEMG00000025402	ENSPEMG00000015269	Klhl7 (ENSPEMG00000017307)	Nupl2 (ENSPEMG00000009593)	Gpnmb (ENSPEMG00000001851)	ENSPEMG00000020458	Igf2bp3 (ENSPEMG00000023450)	ENSPEMG00000008564	ENSPEMG00000027992	Fam221a (ENSPEMG00000022606)
Prairie vole	MODERN SPECIES	101	Actr3b (ENSMOCG00000004828)	Dpp6 (ENSMOCG00000000556)	Paxip1 (ENSMOCG00000013649)	Htr5a (ENSMOCG00000019605)	Insig1 (ENSMOCG00000020032)	En2 (ENSMOCG00000015841)	ENSMOCG00000019441	ENSMOCG00000010240	Rbm33 (ENSMOCG00000021895)	Shh (ENSMOCG00000008843) #18	ENSMOCG00000013020	ENSMOCG00000018001	Rnf32 (ENSMOCG00000014460) #20	Lmbr1 (ENSMOCG00000008297) #21	ENSMOCG00000010734	Nom1 (ENSMOCG00000015962) #22	Mnx1 (ENSMOCG00000020173) #23	ENSMOCG00000002622	Ube3c (ENSMOCG00000018821) #24	ENSMOCG00000018590 #25	ENSMOCG00000018608	ENSMOCG00000002213	Gimap1 (ENSMOCG00000007377)	ENSMOCG00000006854	Gimap6 (ENSMOCG00000018308)	Gimap4 (ENSMOCG00000000523)	Gimap8 (ENSMOCG00000005505)	AI854703 (ENSMOCG00000017746)	Repin1 (ENSMOCG00000021124)	Rarres2 (ENSMOCG00000011498)	Lrrc61 (ENSMOCG00000017442)