Pomacentridae	ANCESTRAL SPECIES		ENSGT00940000162569.a #8	ENSGT00910000144273 #9	ENSGT00390000002024 #10	ENSGT00390000001063 #11	ENSGT00950000182815.a.a.a.a.a.d #12	ENSGT00940000155919.b.a #13	ENSGT00940000155292.db.a.d #14	ENSGT01100000263502.B.a.b.b #15	ENSGT00940000165599.C	ENSGT00940000158504 #16	ENSGT00950000182993.A.b.f #17	ENSGT00390000018386 #18	ENSGT00390000010427.c.t #19	ENSGT00940000155464.a.b #20	ENSGT00390000018651.b #21	ENSGT00530000063675.b #22	ENSGT00390000009571.a.a #23	ENSGT00390000002445 #24	ENSGT00940000157707 #25	ENSGT00940000155181.c.a #26	ENSGT00390000016025.a #27	ENSGT00940000161055 #28	ENSGT00940000153434.c.a #29	ENSGT00390000002374 #30	ENSGT00940000157487 #31	ENSGT00940000169432 #32	ENSGT00390000008742 #33	ENSGT00940000156437 #34	ENSGT00390000003364 #35	ENSGT00940000158577 #36	ENSGT00940000172876 #37
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00940000158510 #7	ENSGT00940000162569.a #8	ENSGT00910000144273 #9	ENSGT00390000002024 #10	ENSGT00390000001063 #11	ENSGT00950000182815.a.a.a.a.a.d #12	ENSGT00940000155919.b.a #13	ENSGT00940000155292.db.a.d #14	ENSGT01100000263502.B.a.b.b #15	ENSGT00940000158504 #16	ENSGT00950000182993.A.b.f #17	ENSGT00390000018386.w #18	ENSGT00390000010427.c.t #19	ENSGT00940000155464.a.b #20	ENSGT00390000018651.b #21	ENSGT00530000063675.b #22	ENSGT00390000009571.a.a #23	ENSGT00390000002445 #24	ENSGT00940000157707 #25	ENSGT00940000155181.c.a #26	ENSGT00390000016025.a #27	ENSGT00940000161055 #28	ENSGT00940000153434.c.a #29	ENSGT00390000002374 #30	ENSGT00940000157487 #31	ENSGT00940000169432 #32	ENSGT00390000008742 #33	ENSGT00940000156437 #34	ENSGT00390000003364 #35	ENSGT00940000158577 #36	ENSGT00940000172876 #37
Amphiprion	ANCESTRAL SPECIES	10	ENSGT00940000162569.a #8	ENSGT00910000144273 #9	ENSGT00390000002024 #10	ENSGT00390000001063 #11	ENSGT00950000182815.a.a.a.a.a.d #12	ENSGT00940000155919.b.a #13	ENSGT00940000155292.db.a.d #14	ENSGT01100000263502.B.a.b.b #15	ENSGT00940000158504 #16	ENSGT00940000182521	ENSGT00950000182993.A.b.f #17	ENSGT00390000018386.w #18	ENSGT00390000010427.c.t #19	ENSGT00940000155464.a.b #20	ENSGT00390000018651.b #21	ENSGT00530000063675.b #22	ENSGT00390000009571.a.a #23	ENSGT00390000002445 #24	ENSGT00940000157707 #25	ENSGT00940000155181.c.a #26	ENSGT00390000016025.a #27	ENSGT00940000161055 #28	ENSGT00940000153434.c.a #29	ENSGT00390000002374 #30	ENSGT00940000157487 #31	ENSGT00940000169432 #32	ENSGT00390000008742 #33	ENSGT00940000156437 #34	ENSGT00390000003364 #35	ENSGT00940000158577 #36	ENSGT00940000173441
Clown anemonefish	MODERN SPECIES	1572						bmpr1ba (ENSAOCG00000012934) #13	pdlim5a (ENSAOCG00000012877) #14	opn4xb (ENSAOCG00000012763) #15	EGFLAM (ENSAOCG00000012444) #16	ENSAOCG00000012356	GDNF (ENSAOCG00000012335) #17	ndc80 (ENSAOCG00000012311) #18	nipbla (ENSAOCG00000012256) #19	slc1a3a (ENSAOCG00000011994) #20	lmbrd2a (ENSAOCG00000011939) #21	GOLM1 (ENSAOCG00000011856) #22	ENSAOCG00000011828 #23	naa35 (ENSAOCG00000011789) #24	agtpbp1 (ENSAOCG00000011583) #25	RASEF (ENSAOCG00000011464)
Orange clownfish	MODERN SPECIES	19	STPG2 (ENSAPEG00000001001) #11	UNC5C (ENSAPEG00000001042) #12	bmpr1ba (ENSAPEG00000001141) #13	ENSAPEG00000001170 #13	pdlim5a (ENSAPEG00000001184) #14	ENSAPEG00000001213	opn4xb (ENSAPEG00000001219) #15	EGFLAM (ENSAPEG00000001264) #16	ENSAPEG00000001374	GDNF (ENSAPEG00000001418) #17	ndc80 (ENSAPEG00000001431) #18	ENSAPEG00000001447 #19	nipbla (ENSAPEG00000001543) #19	slc1a3a (ENSAPEG00000002796) #20	lmbrd2a (ENSAPEG00000002849) #21	GOLM1 (ENSAPEG00000002886) #22	naa35 (ENSAPEG00000002899) #24	agtpbp1 (ENSAPEG00000003001) #25	NTRK2 (ENSAPEG00000003079) #26	SLC28A3 (ENSAPEG00000003122) #27	rmi1 (ENSAPEG00000003178) #28	hnrnpk (ENSAPEG00000003191) #29	zgc:136564 (ENSAPEG00000003210) #30	ENSAPEG00000003234 #31	ENSAPEG00000003264 #32	gkap1 (ENSAPEG00000003303) #33	ENSAPEG00000003383 #34	IDNK (ENSAPEG00000003410) #35	FRMD3 (ENSAPEG00000003415) #36	ENSAPEG00000003455	RASEF (ENSAPEG00000003461)
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	352												ndc80 (ENSAPOG00000010653) #18	nipbla (ENSAPOG00000010703) #19	slc1a3a (ENSAPOG00000000304) #20	lmbrd2a (ENSAPOG00000010775) #21	ENSAPOG00000010785 #22	ENSAPOG00000010804 #23	naa35 (ENSAPOG00000010901) #24	agtpbp1 (ENSAPOG00000011043) #25	NTRK2 (ENSAPOG00000011099) #26	SLC28A3 (ENSAPOG00000011157) #27	rmi1 (ENSAPOG00000011168) #28	hnrnpk (ENSAPOG00000011203) #29	KIF27 (ENSAPOG00000011227) #31	gkap1 (ENSAPOG00000011300) #33	UBQLN1 (ENSAPOG00000011326) #34	PMM1 (ENSAPOG00000011372)	CSDC2 (ENSAPOG00000000741)	polr3h (ENSAPOG00000011407)	aco2 (ENSAPOG00000011484)	TOB2 (ENSAPOG00000011510)
Spiny chromis	MODERN SPECIES	507	ctnnal1 (ENSAPOG00000005776)	abitram (ENSAPOG00000000145)	sla1a (ENSAPOG00000005877)	ccn4a (ENSAPOG00000005930)	ndrg1a (ENSAPOG00000005963)	ENSAPOG00000005990	ENSAPOG00000006060	dync1li1 (ENSAPOG00000000160)	ENSAPOG00000006137	mrpl3 (ENSAPOG00000006179)	cspg5b (ENSAPOG00000006208)	ENSAPOG00000006300	ASTE1 (ENSAPOG00000006320)	klhl7 (ENSAPOG00000000841)	klhl7 (ENSAPOG00000006460)	ENSAPOG00000006480 #22	hycc1 (ENSAPOG00000006540)	TOMM7 (ENSAPOG00000006571)	ENSAPOG00000006672	ENSAPOG00000006695	RAPGEF5 (ENSAPOG00000006762)
Bicolor damselfish	MODERN SPECIES	2255															lmbrd2a (ENSSPAG00000001827) #21	GOLM1 (ENSSPAG00000001866) #22	ENSSPAG00000001876 #23	naa35 (ENSSPAG00000001893) #24	agtpbp1 (ENSSPAG00000001960) #25