Gnathostomata	ANCESTRAL SPECIES	26																ENSGT00530000063790.a #22	ENSGT00530000063632.A #21	ENSGT00940000158851 #20	ENSGT00940000156259 #18	ENSGT00940000155705 #17	ENSGT00940000157700	ENSGT00950000183144.B	ENSGT00390000010768	ENSGT00940000158629 #16	ENSGT00390000015318 #14	ENSGT00420000029753.b #12	ENSGT00390000016650 #10	ENSGT00940000156539 #7	ENSGT00940000154277	ENSGT00510000047220	ENSGT00940000153167.B
Euteleostomi	ANCESTRAL SPECIES	292																ENSGT00530000063790.a #22	ENSGT00530000063632.A #21	ENSGT00940000158851 #20	ENSGT00940000156259.b #18	ENSGT00940000155705.b #17	ENSGT00950000183144.B	ENSGT00940000158629 #16	ENSGT00390000015318 #14	ENSGT00420000029753.b #12	ENSGT00940000167241	ENSGT00390000016650 #10	ENSGT00940000156539 #7	ENSGT00940000154277.a	ENSGT00390000018130.b
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00530000063790.a #22
Tetrapoda	ANCESTRAL SPECIES	8	ENSGT00390000003817	ENSGT00940000161361	ENSGT00940000160152	ENSGT00940000161195	ENSGT00940000155828	ENSGT00390000010768	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00940000164623.C	ENSGT00940000164108.a	ENSGT00390000002634.a	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527	ENSGT00940000154660.b	ENSGT00940000159889
Amniota	ANCESTRAL SPECIES	9	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00390000003464	ENSGT00390000018130.b	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00940000167241	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161527.c	ENSGT00940000161527.d.a
Mammalia	ANCESTRAL SPECIES	47	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00980000201734	ENSGT00940000159889
Theria	ANCESTRAL SPECIES	3	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Eutheria	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00900000143563 #9	ENSGT00940000154277.a.b.a.b	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00900000143563 #9	ENSGT00940000154277.a.b.a.b	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37
Primates	ANCESTRAL SPECIES	4	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00900000143563 #9	ENSGT00940000154277.a.b.a.b	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000003464	ENSGT00940000154277.a.b.b.wb.a	ENSGT00940000156539 #7	ENSGT00900000143563 #9	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00390000003512.a	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000154277.a.b.b.wb.a	ENSGT00940000154277.a.b.b.wb.b	ENSGT00940000156539 #7	ENSGT00900000143563 #9	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00390000003512.a	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37
Mouse lemur	MODERN SPECIES	11	AKR1A1 (ENSMICG00000014600) #7	ENSMICG00000038570 #8	ENSMICG00000046546 #9	NASP (ENSMICG00000008415) #10	CCDC17 (ENSMICG00000008434) #11	ENSMICG00000008449 #12	ENSMICG00000011981 #13	TMEM69 (ENSMICG00000029891) #14	ENSMICG00000012308 #15	IPP (ENSMICG00000007162) #16	MAST2 (ENSMICG00000001029) #17	ENSMICG00000016854 #18	P3R3URF (ENSMICG00000044954) #19	TSPAN1 (ENSMICG00000003260) #20	ENSMICG00000038639 #21	LURAP1 (ENSMICG00000045681) #22	RAD54L (ENSMICG00000003266) #23	LRRC41 (ENSMICG00000003273) #24	ENSMICG00000008251 #25	ENSMICG00000029180 #26	ENSMICG00000037757 #27	NSUN4 (ENSMICG00000043368) #28	ENSMICG00000035628 #29	FAAH (ENSMICG00000010595) #30	ENSMICG00000041885 #31	DMBX1 (ENSMICG00000045428) #32	TMEM275 (ENSMICG00000043204) #33	KNCN (ENSMICG00000037994) #34	ENSMICG00000000071 #35	ATPAF1 (ENSMICG00000000075) #36	TEX38 (ENSMICG00000000074) #37
Lemuriformes_a	ANCESTRAL SPECIES	20	ENSGT00940000154277.a.b.b.wb.a	ENSGT00940000154277.a.b.b.wb.b	ENSGT00940000156539 #7	ENSGT00900000143563 #9	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00390000003512.a	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Greater bamboo lemur	MODERN SPECIES	358								TMEM69 (ENSPSMG00000014311) #14	IPP (ENSPSMG00000014299) #16	ENSPSMG00000014273	MAST2 (ENSPSMG00000014231) #17	PIK3R3 (ENSPSMG00000014011) #18	P3R3URF (ENSPSMG00000013950) #19	TSPAN1 (ENSPSMG00000013947) #20	POMGNT1 (ENSPSMG00000013867) #21	LURAP1 (ENSPSMG00000013782) #22	RAD54L (ENSPSMG00000013757) #23	LRRC41 (ENSPSMG00000013556) #24	ENSPSMG00000013469 #25	ENSPSMG00000013454 #26	NSUN4 (ENSPSMG00000013445) #28	FAAH (ENSPSMG00000013423) #30	DMBX1 (ENSPSMG00000013384) #32	TMEM275 (ENSPSMG00000013378) #33	KNCN (ENSPSMG00000013375) #34	ENSPSMG00000013339 #35	MOB3C (ENSPSMG00000013309)	ATPAF1 (ENSPSMG00000013241) #36	TEX38 (ENSPSMG00000013186) #37	EFCAB14 (ENSPSMG00000013162)	CYP4B1 (ENSPSMG00000013132)
Coquerels sifaka	MODERN SPECIES	423	ENSPCOG00000017950	ENSPCOG00000018952 #7	ENSPCOG00000011078 #9	NASP (ENSPCOG00000017562) #10	CCDC17 (ENSPCOG00000015050) #11	ENSPCOG00000019845 #12	TMEM69 (ENSPCOG00000022363) #14	IPP (ENSPCOG00000027838) #16	ENSPCOG00000021889	ENSPCOG00000003196	MAST2 (ENSPCOG00000010935) #17	PIK3R3 (ENSPCOG00000015371) #18	P3R3URF (ENSPCOG00000027169) #19	TSPAN1 (ENSPCOG00000027682) #20	POMGNT1 (ENSPCOG00000023630) #21	LURAP1 (ENSPCOG00000022215) #22	RAD54L (ENSPCOG00000015423) #23	LRRC41 (ENSPCOG00000023433) #24	ENSPCOG00000017328 #25	ENSPCOG00000013878 #26	NSUN4 (ENSPCOG00000013670) #28	FAAH (ENSPCOG00000022513) #30	DMBX1 (ENSPCOG00000017204) #32	TMEM275 (ENSPCOG00000027485) #33	KNCN (ENSPCOG00000027106) #34	MKNK1 (ENSPCOG00000026912)	MOB3C (ENSPCOG00000022632)	ATPAF1 (ENSPCOG00000017548) #36	TEX38 (ENSPCOG00000027518) #37	ENSPCOG00000004448	ENSPCOG00000021920
Bushbaby	MODERN SPECIES	325						AKR1A1 (ENSOGAG00000007175) #7	NASP (ENSOGAG00000008641) #10	CCDC17 (ENSOGAG00000009331) #11	ENSOGAG00000028598	GPBP1L1 (ENSOGAG00000004134) #12	IPP (ENSOGAG00000004140) #16	MAST2 (ENSOGAG00000006435) #17	PIK3R3 (ENSOGAG00000006446) #18	POMGNT1 (ENSOGAG00000003522) #21	TSPAN1 (ENSOGAG00000029255) #20	LURAP1 (ENSOGAG00000000910) #22	RAD54L (ENSOGAG00000001132) #23	LRRC41 (ENSOGAG00000033806) #24	ENSOGAG00000001134 #25	NSUN4 (ENSOGAG00000014079) #28	ENSOGAG00000030900 #26	FAAH (ENSOGAG00000003542) #30	ENSOGAG00000027019 #31	DMBX1 (ENSOGAG00000005074) #32	KNCN (ENSOGAG00000031622) #34	ENSOGAG00000014430 #35	MOB3C (ENSOGAG00000032036)	ATPAF1 (ENSOGAG00000014436) #36	EFCAB14 (ENSOGAG00000014445)	ENSOGAG00000027560	CYP4B1 (ENSOGAG00000014453)
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00900000143563 #9	ENSGT00940000154277.a.b.a.b	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00900000143563 #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00900000143563 #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT01050000245298	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.a #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650.g.a #10	ENSGT00900000143563.c #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318.d #14	ENSGT00940000158629 #16	ENSGT01050000245298	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.a #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Hominidae	ANCESTRAL SPECIES	3	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650.g.a #10	ENSGT00900000143563.c #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318.d #14	ENSGT00940000158629 #16	ENSGT01050000245298	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.a #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Orangutan	MODERN SPECIES		TESK2 (ENSPPYG00000001413)	MMACHC (ENSPPYG00000001412)	ENSPPYG00000001411	AKR1A1 (ENSPPYG00000001410) #7	NASP (ENSPPYG00000001409) #10	CCDC17 (ENSPPYG00000001408) #11	GPBP1L1 (ENSPPYG00000001407) #12	ENSPPYG00000034708 #14	IPP (ENSPPYG00000001404) #16	MAST2 (ENSPPYG00000001403) #17	ENSPPYG00000040360	PIK3R3 (ENSPPYG00000001402) #18	P3R3URF (ENSPPYG00000032806) #19	TSPAN1 (ENSPPYG00000001401) #20	POMGNT1 (ENSPPYG00000001400) #21	LURAP1 (ENSPPYG00000039509) #22	RAD54L (ENSPPYG00000001398) #23	LRRC41 (ENSPPYG00000001397) #24	ENSPPYG00000025831 #25	NSUN4 (ENSPPYG00000001396) #28	FAAH (ENSPPYG00000001395) #30	DMBX1 (ENSPPYG00000001394) #32	TMEM275 (ENSPPYG00000032094) #33	ENSPPYG00000001393	MKNK1 (ENSPPYG00000001392)	MOB3C (ENSPPYG00000029604)	ENSPPYG00000034582	ATPAF1 (ENSPPYG00000001391) #36	TEX38 (ENSPPYG00000001390) #37	EFCAB14 (ENSPPYG00000001389)	ENSPPYG00000001388
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650.g.a #10	ENSGT00900000143563.c #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318.d #14	ENSGT00940000158629 #16	ENSGT01050000245298	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00700000106049 #19	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.b #25	ENSGT00390000003860.h.a.a.c #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00910000147215	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650.g.a #10	ENSGT00900000143563.c #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318.d #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00700000106049 #19	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.a.c #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00910000147215	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Pan	ANCESTRAL SPECIES		ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650.g.a #10	ENSGT00900000143563.c #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318.d #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00700000106049 #19	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.a.c #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00910000147215	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Chimpanzee	MODERN SPECIES		CCDC163 (ENSPTRG00000040424)	MMACHC (ENSPTRG00000052080)	PRDX1 (ENSPTRG00000000675)	AKR1A1 (ENSPTRG00000000676) #7	NASP (ENSPTRG00000000677) #10	ENSPTRG00000046584 #9	CCDC17 (ENSPTRG00000000679) #11	GPBP1L1 (ENSPTRG00000000680) #12	TMEM69 (ENSPTRG00000000681) #14	IPP (ENSPTRG00000024149) #16	MAST2 (ENSPTRG00000000683) #17	PIK3R3 (ENSPTRG00000000685) #18	TSPAN1 (ENSPTRG00000000686) #20	P3R3URF (ENSPTRG00000047364) #19	POMGNT1 (ENSPTRG00000000687) #21	LURAP1 (ENSPTRG00000000688) #22	RAD54L (ENSPTRG00000000689) #23	LRRC41 (ENSPTRG00000000690) #24	ENSPTRG00000000691 #25	NSUN4 (ENSPTRG00000000692) #28	FAAH (ENSPTRG00000000693) #30	DMBX1 (ENSPTRG00000024252) #32	ENSPTRG00000048531	TMEM275 (ENSPTRG00000052625) #33	KNCN (ENSPTRG00000048945) #34	MKNK1 (ENSPTRG00000046874)	MOB3C (ENSPTRG00000000697)	ENSPTRG00000050559	ATPAF1 (ENSPTRG00000043035) #36	TEX38 (ENSPTRG00000043673) #37	EFCAB14 (ENSPTRG00000000701)
Bonobo	MODERN SPECIES		PRDX1 (ENSPPAG00000001809)	AKR1A1 (ENSPPAG00000030280) #7	NASP (ENSPPAG00000032932) #10	ENSPPAG00000036044 #9	CCDC17 (ENSPPAG00000039653) #11	GPBP1L1 (ENSPPAG00000039296) #12	TMEM69 (ENSPPAG00000036310) #14	IPP (ENSPPAG00000037424) #16	MAST2 (ENSPPAG00000039968) #17	ENSPPAG00000033275	PIK3R3 (ENSPPAG00000009679) #18	ENSPPAG00000039075	TSPAN1 (ENSPPAG00000041180) #20	P3R3URF (ENSPPAG00000033181) #19	POMGNT1 (ENSPPAG00000030808) #21	LURAP1 (ENSPPAG00000034121) #22	RAD54L (ENSPPAG00000031222) #23	LRRC41 (ENSPPAG00000030986) #24	UQCRH (ENSPPAG00000037608) #25	NSUN4 (ENSPPAG00000039566) #28	FAAH (ENSPPAG00000032528) #30	DMBX1 (ENSPPAG00000033983) #32	ENSPPAG00000037907	KNCN (ENSPPAG00000027451) #34	MKNK1 (ENSPPAG00000000987)	MOB3C (ENSPPAG00000042553)	ENSPPAG00000019361	ATPAF1 (ENSPPAG00000031376) #36	TEX38 (ENSPPAG00000034178) #37	EFCAB14 (ENSPPAG00000043833)	CYP4B1 (ENSPPAG00000033977)
Human	MODERN SPECIES		CCDC163 (ENSG00000280670)	MMACHC (ENSG00000132763)	PRDX1 (ENSG00000117450)	AKR1A1 (ENSG00000117448) #7	NASP (ENSG00000132780) #10	CCDC17 (ENSG00000159588) #11	GPBP1L1 (ENSG00000159592) #12	TMEM69 (ENSG00000159596) #14	IPP (ENSG00000197429) #16	MAST2 (ENSG00000086015) #17	PIK3R3 (ENSG00000117461) #18	P3R3URF-PIK3R3 (ENSG00000278139)	TSPAN1 (ENSG00000117472) #20	P3R3URF (ENSG00000250719) #19	POMGNT1 (ENSG00000085998) #21	LURAP1 (ENSG00000171357) #22	RAD54L (ENSG00000085999) #23	LRRC41 (ENSG00000132128) #24	UQCRH (ENSG00000173660) #25	NSUN4 (ENSG00000117481) #28	FAAH (ENSG00000117480) #30	DMBX1 (ENSG00000197587) #32	TMEM275 (ENSG00000282881) #33	KNCN (ENSG00000162456) #34	MKNK1 (ENSG00000079277)	MOB3C (ENSG00000142961)	ATPAF1 (ENSG00000123472) #36	TEX38 (ENSG00000186118) #37	EFCAB14 (ENSG00000159658)	CYP4B1 (ENSG00000142973)	CYP4A11 (ENSG00000187048)
Gorilla	MODERN SPECIES		PRDX1 (ENSGGOG00000005411)	AKR1A1 (ENSGGOG00000012740) #7	NASP (ENSGGOG00000026351) #10	ENSGGOG00000039910 #10	ENSGGOG00000039227 #9	ENSGGOG00000037082 #9	CCDC17 (ENSGGOG00000000343) #11	GPBP1L1 (ENSGGOG00000000346) #12	TMEM69 (ENSGGOG00000025165) #14	IPP (ENSGGOG00000013338) #16	MAST2 (ENSGGOG00000015659) #17	ENSGGOG00000003133	PIK3R3 (ENSGGOG00000010206) #18	TSPAN1 (ENSGGOG00000025248) #20	POMGNT1 (ENSGGOG00000002359) #21	LURAP1 (ENSGGOG00000025696) #22	RAD54L (ENSGGOG00000010602) #23	LRRC41 (ENSGGOG00000010618) #24	ENSGGOG00000039350 #25	NSUN4 (ENSGGOG00000012822) #28	ENSGGOG00000041972 #28	FAAH (ENSGGOG00000014596) #30	DMBX1 (ENSGGOG00000012073) #32	ENSGGOG00000042781	TMEM275 (ENSGGOG00000044121) #33	KNCN (ENSGGOG00000012079) #34	MKNK1 (ENSGGOG00000012084)	MOB3C (ENSGGOG00000012095)	ENSGGOG00000037049	ENSGGOG00000024754 #36	TEX38 (ENSGGOG00000026717) #37
Gibbon	MODERN SPECIES	2	MMACHC (ENSNLEG00000014521)	ENSNLEG00000029791	AKR1A1 (ENSNLEG00000014434) #7	NASP (ENSNLEG00000028408) #10	ENSNLEG00000028280 #9	CCDC17 (ENSNLEG00000014585) #11	GPBP1L1 (ENSNLEG00000014609) #12	TMEM69 (ENSNLEG00000014634) #14	IPP (ENSNLEG00000016693) #16	MAST2 (ENSNLEG00000016676) #17	PIK3R3 (ENSNLEG00000016649) #18	ENSNLEG00000035647	TSPAN1 (ENSNLEG00000016634) #20	P3R3URF (ENSNLEG00000034472) #19	POMGNT1 (ENSNLEG00000016590) #21	LURAP1 (ENSNLEG00000030244) #22	RAD54L (ENSNLEG00000016548) #23	LRRC41 (ENSNLEG00000016529) #24	ENSNLEG00000016523 #25	NSUN4 (ENSNLEG00000016513) #28	FAAH (ENSNLEG00000016464) #30	DMBX1 (ENSNLEG00000016458) #32	ENSNLEG00000035328	ENSNLEG00000016455 #34	MKNK1 (ENSNLEG00000016447)	MOB3C (ENSNLEG00000016442)	ENSNLEG00000030967 #36	TEX38 (ENSNLEG00000016440) #37	EFCAB14 (ENSNLEG00000016421)	ENSNLEG00000016409	PDZK1IP1 (ENSNLEG00000016402)
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00900000143563 #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT01050000245298	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00390000012178.g.a.a	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.a #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196.e
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00900000143563 #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT01050000245298	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.b #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196.e
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00900000143563 #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT01050000245298	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.b #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196.e
Macaca	ANCESTRAL SPECIES		ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00900000143563 #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.a.b #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196.e
Pig-tailed macaque	MODERN SPECIES	217	MMACHC (ENSMNEG00000021916)	ENSMNEG00000039519	AKR1A1 (ENSMNEG00000038449) #7	NASP (ENSMNEG00000036809) #10	ENSMNEG00000032506 #9	CCDC17 (ENSMNEG00000035848) #11	GPBP1L1 (ENSMNEG00000006636) #12	IPP (ENSMNEG00000036105) #16	MAST2 (ENSMNEG00000037139) #17	ENSMNEG00000018030	ENSMNEG00000019362	PIK3R3 (ENSMNEG00000042202) #18	TSPAN1 (ENSMNEG00000026812) #20	P3R3URF (ENSMNEG00000032160) #19	POMGNT1 (ENSMNEG00000036624) #21	LURAP1 (ENSMNEG00000034862) #22	RAD54L (ENSMNEG00000038562) #23	LRRC41 (ENSMNEG00000028167) #24	ENSMNEG00000039766 #25	NSUN4 (ENSMNEG00000026867) #28	FAAH (ENSMNEG00000038745) #30	DMBX1 (ENSMNEG00000036558) #32	ENSMNEG00000026469	KNCN (ENSMNEG00000027695) #34	MKNK1 (ENSMNEG00000037534)	MOB3C (ENSMNEG00000019317)	ENSMNEG00000009678	ATPAF1 (ENSMNEG00000039287) #36	TEX38 (ENSMNEG00000036840) #37	EFCAB14 (ENSMNEG00000041371)	CYP4B1 (ENSMNEG00000041426)
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00390000003464	ENSGT00940000154277.a.b.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318.f #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196.e	ENSGT00940000161441
Rhesus	MODERN SPECIES		TOE1 (ENSMMUG00000020081)	TESK2 (ENSMMUG00000020083)	MMACHC (ENSMMUG00000015950)	PRDX1 (ENSMMUG00000006221)	ENSMMUG00000010773	AKR1A1 (ENSMMUG00000049745) #7	NASP (ENSMMUG00000023431) #10	ENSMMUG00000059762	GPBP1L1 (ENSMMUG00000001960) #11	ENSMMUG00000040638 #14	IPP (ENSMMUG00000001831) #16	MAST2 (ENSMMUG00000015371) #17	PIK3R3 (ENSMMUG00000015080) #18	TSPAN1 (ENSMMUG00000016452) #20	POMGNT1 (ENSMMUG00000015078) #21	LURAP1 (ENSMMUG00000063599) #22	RAD54L (ENSMMUG00000011568) #23	LRRC41 (ENSMMUG00000032149) #24	UQCRH (ENSMMUG00000002714) #30	ENSMMUG00000055679	ENSMMUG00000056382 #31	DMBX1 (ENSMMUG00000014634) #32	TMEM275 (ENSMMUG00000054075) #33	KNCN (ENSMMUG00000044038) #34	MKNK1 (ENSMMUG00000020162)	MOB3C (ENSMMUG00000063131)	ENSMMUG00000056620	ATPAF1 (ENSMMUG00000004863) #36	TEX38 (ENSMMUG00000004864) #37	ENSMMUG00000056043	CYP4B1 (ENSMMUG00000019873)
Crab-eating macaque	MODERN SPECIES		TOE1 (ENSMFAG00000042312)	TESK2 (ENSMFAG00000042816)	MMACHC (ENSMFAG00000045813)	PRDX1 (ENSMFAG00000062110)	NASP (ENSMFAG00000043112) #10	ENSMFAG00000000878	GPBP1L1 (ENSMFAG00000038278) #12	AKR1A1 (ENSMFAG00000036808) #7	ENSMFAG00000000895 #14	IPP (ENSMFAG00000043099) #16	MAST2 (ENSMFAG00000032736) #17	PIK3R3 (ENSMFAG00000033868) #18	P3R3URF (ENSMFAG00000036616) #19	TSPAN1 (ENSMFAG00000042909) #20	POMGNT1 (ENSMFAG00000000070) #21	LURAP1 (ENSMFAG00000036741) #22	RAD54L (ENSMFAG00000031241) #23	LRRC41 (ENSMFAG00000039635) #24	NSUN4 (ENSMFAG00000036603) #28	ENSMFAG00000065640 #31	DMBX1 (ENSMFAG00000058375) #32	FAAH (ENSMFAG00000046153) #30	ENSMFAG00000016019	KNCN (ENSMFAG00000045471) #34	MKNK1 (ENSMFAG00000026976)	MOB3C (ENSMFAG00000032003)	TEX38 (ENSMFAG00000039763) #37	ENSMFAG00000038571	CYP4B1 (ENSMFAG00000031207)	CYP4A11 (ENSMFAG00000032544)	CYP4X1 (ENSMFAG00000000631)
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00900000143563 #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT01050000245298	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00390000012178.g.a.a.f	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.b #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196.e	ENSGT00940000161441
Olive baboon	MODERN SPECIES		ENSPANG00000009590	PRDX1 (ENSPANG00000017082)	AKR1A1 (ENSPANG00000005968) #7	NASP (ENSPANG00000015884) #10	CCDC17 (ENSPANG00000008893) #11	GPBP1L1 (ENSPANG00000016209) #12	TMEM69 (ENSPANG00000023339) #14	IPP (ENSPANG00000004692) #16	MAST2 (ENSPANG00000013684) #17	PIK3R3 (ENSPANG00000008892) #18	ENSPANG00000030223	ENSPANG00000043011	TSPAN1 (ENSPANG00000005967) #20	P3R3URF (ENSPANG00000035602) #19	POMGNT1 (ENSPANG00000008891) #21	LURAP1 (ENSPANG00000006505) #22	RAD54L (ENSPANG00000016295) #23	LRRC41 (ENSPANG00000004655) #24	FAAH (ENSPANG00000024429) #30	DMBX1 (ENSPANG00000018121) #32	TMEM275 (ENSPANG00000042200) #33	KNCN (ENSPANG00000004348) #34	MKNK1 (ENSPANG00000017534)	MOB3C (ENSPANG00000024015)	ENSPANG00000035797	ENSPANG00000008381	TEX38 (ENSPANG00000003011) #37	ENSPANG00000038944	CYP4B1 (ENSPANG00000005048)	ENSPANG00000047962	CYP4X1 (ENSPANG00000009894)
Cercopithecinae_d	ANCESTRAL SPECIES	1	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00900000143563 #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT01050000245298	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00910000147102	ENSGT00390000012178.g.a.a.f	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.b #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00910000147215	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196.e	ENSGT00940000161441
Sooty mangabey	MODERN SPECIES	227	AKR1A1 (ENSCATG00000039808) #7	ENSCATG00000038369 #9	NASP (ENSCATG00000039074) #10	CCDC17 (ENSCATG00000038314) #11	GPBP1L1 (ENSCATG00000042326) #12	TMEM69 (ENSCATG00000040792) #14	IPP (ENSCATG00000038481) #16	ENSCATG00000037418	MAST2 (ENSCATG00000041661) #17	ENSCATG00000040797	ENSCATG00000040773	PIK3R3 (ENSCATG00000037019) #18	P3R3URF (ENSCATG00000032873) #19	TSPAN1 (ENSCATG00000032912) #20	POMGNT1 (ENSCATG00000035645) #21	LURAP1 (ENSCATG00000034556) #22	RAD54L (ENSCATG00000030589) #23	LRRC41 (ENSCATG00000039299) #24	ENSCATG00000040022 #25	NSUN4 (ENSCATG00000037551) #28	FAAH (ENSCATG00000042523) #30	DMBX1 (ENSCATG00000037197) #32	ENSCATG00000002542	KNCN (ENSCATG00000031263) #34	MKNK1 (ENSCATG00000041619)	MOB3C (ENSCATG00000036852)	ATPAF1 (ENSCATG00000028437) #36	TEX38 (ENSCATG00000017714) #37	EFCAB14 (ENSCATG00000011061)	CYP4B1 (ENSCATG00000035734)	ENSCATG00000040862
Drill	MODERN SPECIES	1641									MAST2 (ENSMLEG00000028932) #17	PIK3R3 (ENSMLEG00000039675) #18	ENSMLEG00000040905	ENSMLEG00000041425	TSPAN1 (ENSMLEG00000043884) #20	P3R3URF (ENSMLEG00000033449) #19	POMGNT1 (ENSMLEG00000038956) #21	LURAP1 (ENSMLEG00000039907) #22	RAD54L (ENSMLEG00000038145) #23	LRRC41 (ENSMLEG00000035892) #24	ENSMLEG00000040732 #25	NSUN4 (ENSMLEG00000030145) #28	FAAH (ENSMLEG00000040364) #30	DMBX1 (ENSMLEG00000038602) #32	ENSMLEG00000023577	KNCN (ENSMLEG00000039554) #34	MKNK1 (ENSMLEG00000043277)	MOB3C (ENSMLEG00000033239)	ENSMLEG00000027297
Vervet Monkey	MODERN SPECIES	12	TOE1 (ENSCSAG00000001213)	TESK2 (ENSCSAG00000001214)	MMACHC (ENSCSAG00000001215)	PRDX1 (ENSCSAG00000001216)	AKR1A1 (ENSCSAG00000001217) #7	NASP (ENSCSAG00000001218) #10	CCDC17 (ENSCSAG00000001219) #11	ENSCSAG00000001220	GPBP1L1 (ENSCSAG00000001221) #12	TMEM69 (ENSCSAG00000001222) #14	IPP (ENSCSAG00000001223) #16	MAST2 (ENSCSAG00000001224) #17	PIK3R3 (ENSCSAG00000001225) #18	TSPAN1 (ENSCSAG00000001226) #20	POMGNT1 (ENSCSAG00000001227) #21	LURAP1 (ENSCSAG00000001228) #22	RAD54L (ENSCSAG00000001229) #23	LRRC41 (ENSCSAG00000001230) #24	ENSCSAG00000001231 #25	NSUN4 (ENSCSAG00000001232) #28	FAAH (ENSCSAG00000001233) #30	ENSCSAG00000001234 #31	DMBX1 (ENSCSAG00000001235) #32	KNCN (ENSCSAG00000001236) #34	MKNK1 (ENSCSAG00000001237)	MOB3C (ENSCSAG00000001238)	ATPAF1 (ENSCSAG00000001239) #36	TEX38 (ENSCSAG00000001240) #37	EFCAB14 (ENSCSAG00000001241)	CYP4B1 (ENSCSAG00000001242)	ENSCSAG00000001243
Rhinopithecus	ANCESTRAL SPECIES	172											ENSGT00940000154818.a.a	ENSGT00940000154720.b.pb	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.h.a.a #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00620000089223	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196.e	ENSGT00940000161441	ENSGT00940000163504.c
Black snub-nosed monkey	MODERN SPECIES	693	MMACHC (ENSRBIG00000010274)	ENSRBIG00000028267	ENSRBIG00000044745 #9	NASP (ENSRBIG00000038388) #10	CCDC17 (ENSRBIG00000044458) #11	GPBP1L1 (ENSRBIG00000040924) #12	TMEM69 (ENSRBIG00000029272) #14	IPP (ENSRBIG00000031821) #16	MAST2 (ENSRBIG00000039234) #17	ENSRBIG00000014916	PIK3R3 (ENSRBIG00000010667) #18	ENSRBIG00000007567	P3R3URF (ENSRBIG00000029879) #19	TSPAN1 (ENSRBIG00000028021) #20	POMGNT1 (ENSRBIG00000025961) #21	LURAP1 (ENSRBIG00000044781) #22	RAD54L (ENSRBIG00000043495) #23	LRRC41 (ENSRBIG00000032151) #24	ENSRBIG00000026841 #25	NSUN4 (ENSRBIG00000033827) #28	FAAH (ENSRBIG00000033681) #30	DMBX1 (ENSRBIG00000044024) #32	KNCN (ENSRBIG00000026528) #34	MKNK1 (ENSRBIG00000033459)	MOB3C (ENSRBIG00000027087)	ENSRBIG00000024866	ATPAF1 (ENSRBIG00000043521) #36	TEX38 (ENSRBIG00000034501) #37	ENSRBIG00000017162	CYP4B1 (ENSRBIG00000036413)	CYP4A11 (ENSRBIG00000038527)
Golden snub-nosed monkey	MODERN SPECIES	1055	ENSRROG00000042920	ENSRROG00000044891 #7	ENSRROG00000043765 #9	NASP (ENSRROG00000026624) #10	CCDC17 (ENSRROG00000041688) #11	GPBP1L1 (ENSRROG00000008564) #12	TMEM69 (ENSRROG00000037598) #14	IPP (ENSRROG00000031961) #16	MAST2 (ENSRROG00000040137) #17	ENSRROG00000012128	PIK3R3 (ENSRROG00000039135) #18	ENSRROG00000015879	P3R3URF (ENSRROG00000038849) #19	TSPAN1 (ENSRROG00000037921) #20	POMGNT1 (ENSRROG00000045345) #21	LURAP1 (ENSRROG00000045648) #22	RAD54L (ENSRROG00000020844) #23	LRRC41 (ENSRROG00000040000) #24	ENSRROG00000041043 #25	NSUN4 (ENSRROG00000000359) #28	FAAH (ENSRROG00000042930) #30	DMBX1 (ENSRROG00000013894) #32	KNCN (ENSRROG00000036847) #34	MKNK1 (ENSRROG00000039899)	MOB3C (ENSRROG00000038186)	ATPAF1 (ENSRROG00000042673) #36	TEX38 (ENSRROG00000030489) #37	EFCAB14 (ENSRROG00000028702)	CYP4B1 (ENSRROG00000030827)	ENSRROG00000044254	CYP4X1 (ENSRROG00000042954)
Platyrrhini	ANCESTRAL SPECIES		ENSGT00390000003464.f	ENSGT00940000154277.a.b.b.hb.a	ENSGT00940000156539.i #7	ENSGT00390000016650 #10	ENSGT00900000143563 #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00950000183210.d.a.c.b.a.b	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Cebidae	ANCESTRAL SPECIES	1	ENSGT00390000003464.f	ENSGT00940000154277.a.b.b.hb.a	ENSGT00940000156539.i #7	ENSGT00390000016650 #10	ENSGT00900000143563 #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00950000183210.d.a.c.b.a.b	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000154277.a.b.b.hb.b	ENSGT00940000154277.a.b.a.a	ENSGT00940000156539.i #7	ENSGT00390000016650 #10	ENSGT00900000143563 #9	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00910000147102	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00950000183210.d.a.c.b.a.b	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Capuchin	MODERN SPECIES	129	NASP (ENSCCAG00000013381) #10	ENSCCAG00000030061 #9	CCDC17 (ENSCCAG00000020473) #11	GPBP1L1 (ENSCCAG00000034468) #12	TMEM69 (ENSCCAG00000019582) #14	ENSCCAG00000024242	IPP (ENSCCAG00000023129) #16	MAST2 (ENSCCAG00000027633) #17	ENSCCAG00000004296	ENSCCAG00000006015	ENSCCAG00000035429	PIK3R3 (ENSCCAG00000024208) #18	P3R3URF (ENSCCAG00000022458) #19	TSPAN1 (ENSCCAG00000034126) #20	POMGNT1 (ENSCCAG00000020010) #21	LURAP1 (ENSCCAG00000036145) #22	RAD54L (ENSCCAG00000025783) #23	LRRC41 (ENSCCAG00000031729) #24	ENSCCAG00000030929 #25	NSUN4 (ENSCCAG00000030478) #28	FAAH (ENSCCAG00000029850) #30	DMBX1 (ENSCCAG00000037490) #32	KNCN (ENSCCAG00000022467) #34	ENSCCAG00000024273 #35	MOB3C (ENSCCAG00000034971)	ATPAF1 (ENSCCAG00000036733) #36	TEX38 (ENSCCAG00000022007) #37	ENSCCAG00000034040	CYP4B1 (ENSCCAG00000032640)	CYP4A11 (ENSCCAG00000032011)	CYP4X1 (ENSCCAG00000023529)
Bolivian squirrel monkey	MODERN SPECIES	130	TESK2 (ENSSBOG00000035301)	MMACHC (ENSSBOG00000031147)	ENSSBOG00000035406	AKR1A1 (ENSSBOG00000032728) #7	NASP (ENSSBOG00000024478) #10	CCDC17 (ENSSBOG00000002584) #11	GPBP1L1 (ENSSBOG00000028478) #12	IPP (ENSSBOG00000025688) #16	ENSSBOG00000025173	MAST2 (ENSSBOG00000026992) #17	ENSSBOG00000035141	PIK3R3 (ENSSBOG00000024946) #18	P3R3URF (ENSSBOG00000025347) #19	TSPAN1 (ENSSBOG00000035428) #20	POMGNT1 (ENSSBOG00000022467) #21	LURAP1 (ENSSBOG00000032879) #22	RAD54L (ENSSBOG00000024672) #23	LRRC41 (ENSSBOG00000026644) #24	ENSSBOG00000033788 #25	NSUN4 (ENSSBOG00000021418) #28	FAAH (ENSSBOG00000014904) #30	ENSSBOG00000033590 #31	DMBX1 (ENSSBOG00000032738) #32	ENSSBOG00000034928	KNCN (ENSSBOG00000034951) #34	MKNK1 (ENSSBOG00000025387)	ATPAF1 (ENSSBOG00000036018) #36	TEX38 (ENSSBOG00000024302) #37	EFCAB14 (ENSSBOG00000034890)	ENSSBOG00000030826	CYP4A11 (ENSSBOG00000015955)
Marmoset	MODERN SPECIES	19	MMACHC (ENSCJAG00000004805)	AKR1A1 (ENSCJAG00000013633) #7	ENSCJAG00000070346	NASP (ENSCJAG00000013641) #10	GPBP1L1 (ENSCJAG00000013727) #12	ENSCJAG00000080958	TMEM69 (ENSCJAG00000013787) #14	IPP (ENSCJAG00000013788) #16	ENSCJAG00000082283	MAST2 (ENSCJAG00000020964) #17	ENSCJAG00000075402	PIK3R3 (ENSCJAG00000021001) #18	P3R3URF (ENSCJAG00000047009) #19	TSPAN1 (ENSCJAG00000021020) #20	POMGNT1 (ENSCJAG00000021026) #21	LURAP1 (ENSCJAG00000045585) #22	RAD54L (ENSCJAG00000021080) #23	LRRC41 (ENSCJAG00000021111) #24	ENSCJAG00000070283 #25	NSUN4 (ENSCJAG00000021132) #28	FAAH (ENSCJAG00000021138) #30	DMBX1 (ENSCJAG00000072588) #32	KNCN (ENSCJAG00000021147) #34	MKNK1 (ENSCJAG00000021149)	MOB3C (ENSCJAG00000021158)	ATPAF1 (ENSCJAG00000070547) #36	TEX38 (ENSCJAG00000021163) #37	EFCAB14 (ENSCJAG00000046008)	CYP4X1 (ENSCJAG00000043987)	ENSCJAG00000062966	ENSCJAG00000083949
Mas night monkey	MODERN SPECIES	679	AKR1A1 (ENSANAG00000026876) #7	ENSANAG00000038470 #9	NASP (ENSANAG00000031873) #10	CCDC17 (ENSANAG00000034684) #11	GPBP1L1 (ENSANAG00000026692) #12	TMEM69 (ENSANAG00000031848) #14	IPP (ENSANAG00000031966) #16	ENSANAG00000025655	ENSANAG00000025021	ENSANAG00000001572	MAST2 (ENSANAG00000026216) #17	PIK3R3 (ENSANAG00000037471) #18	P3R3URF (ENSANAG00000036310) #19	TSPAN1 (ENSANAG00000031824) #20	POMGNT1 (ENSANAG00000026631) #21	LURAP1 (ENSANAG00000037106) #22	RAD54L (ENSANAG00000035439) #23	LRRC41 (ENSANAG00000029615) #24	ENSANAG00000027102 #25	NSUN4 (ENSANAG00000022673) #28	FAAH (ENSANAG00000012697) #30	DMBX1 (ENSANAG00000036763) #32	ENSANAG00000029807	KNCN (ENSANAG00000036447) #34	MKNK1 (ENSANAG00000022817)	MOB3C (ENSANAG00000036313)	ATPAF1 (ENSANAG00000033472) #36	TEX38 (ENSANAG00000022553) #37	EFCAB14 (ENSANAG00000023693)	CYP4A11 (ENSANAG00000019404)	ENSANAG00000035850
Tarsier	MODERN SPECIES	7077																LURAP1 (ENSTSYG00000012842) #22	RAD54L (ENSTSYG00000002032) #23	LRRC41 (ENSTSYG00000027351) #24
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00900000143563 #9	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Tree shrew	MODERN SPECIES	5744												ENSTBEG00000006694 #17	PIK3R3 (ENSTBEG00000008364) #18	TSPAN1 (ENSTBEG00000008853) #20	POMGNT1 (ENSTBEG00000009116) #21	LURAP1 (ENSTBEG00000009661) #22	RAD54L (ENSTBEG00000009914) #23	ENSTBEG00000010590 #24	ENSTBEG00000011608 #25	NSUN4 (ENSTBEG00000012236) #28
Glires	ANCESTRAL SPECIES		ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00900000143563 #9	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Lagomorpha	ANCESTRAL SPECIES	8	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00900000143563 #9	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00940000162886	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Rabbit	MODERN SPECIES	4	ENSOCUG00000022986	MMACHC (ENSOCUG00000005954)	ENSOCUG00000005951	AKR1A1 (ENSOCUG00000017363) #7	ENSOCUG00000035007 #9	NASP (ENSOCUG00000025231) #10	ENSOCUG00000017938	GPBP1L1 (ENSOCUG00000017939) #12	TMEM69 (ENSOCUG00000011433) #14	IPP (ENSOCUG00000016604) #16	ENSOCUG00000014294 #17	PIK3R3 (ENSOCUG00000014319) #18	P3R3URF (ENSOCUG00000031739) #19	TSPAN1 (ENSOCUG00000005217) #20	POMGNT1 (ENSOCUG00000005220) #21	LURAP1 (ENSOCUG00000005225) #22	RAD54L (ENSOCUG00000005229) #23	LRRC41 (ENSOCUG00000027117) #24	NSUN4 (ENSOCUG00000007598) #28	FAAH (ENSOCUG00000003441) #30	DMBX1 (ENSOCUG00000006630) #32	TMEM275 (ENSOCUG00000030363) #33	KNCN (ENSOCUG00000005134) #34	ENSOCUG00000003495 #35	MOB3C (ENSOCUG00000021111)	ATPAF1 (ENSOCUG00000009230) #36	TEX38 (ENSOCUG00000006612) #37	EFCAB14 (ENSOCUG00000006616)	ENSOCUG00000012284	CYP4B1 (ENSOCUG00000011201)	CYP4A5 (ENSOCUG00000025702)
Pika	MODERN SPECIES	505												MAST2 (ENSOPRG00000015909) #17	PIK3R3 (ENSOPRG00000015943) #18	TSPAN1 (ENSOPRG00000015965) #20	POMGNT1 (ENSOPRG00000015981) #21	LURAP1 (ENSOPRG00000016010) #22	RAD54L (ENSOPRG00000016016) #23	ENSOPRG00000016037 #24	ENSOPRG00000016059 #25
Rodentia	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b.o #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441	ENSGT00940000163570.a
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b.o #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441	ENSGT00940000163570.a
Hystricomorpha_b	ANCESTRAL SPECIES	54	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b.o #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00700000106049 #19	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441	ENSGT00940000163570.a
Degu	MODERN SPECIES	148	MMACHC (ENSODEG00000007879)	ENSODEG00000007632	AKR1A1 (ENSODEG00000007507) #7	ENSODEG00000007756 #10	CCDC17 (ENSODEG00000008745) #11	ENSODEG00000008536 #12	TMEM69 (ENSODEG00000008166) #14	IPP (ENSODEG00000007658) #16	ENSODEG00000019594	ENSODEG00000007916 #17	ENSODEG00000008099 #17	PIK3R3 (ENSODEG00000007372) #18	TSPAN1 (ENSODEG00000007355) #20	P3R3URF (ENSODEG00000007045) #19	POMGNT1 (ENSODEG00000009129) #21	LURAP1 (ENSODEG00000007630) #22	RAD54L (ENSODEG00000008519) #23	LRRC41 (ENSODEG00000010892) #24	ENSODEG00000008021 #25	ENSODEG00000009454 #26	NSUN4 (ENSODEG00000007797) #28	FAAH (ENSODEG00000009316) #30	ENSODEG00000012863	DMBX1 (ENSODEG00000009303) #32	KNCN (ENSODEG00000007576) #34	ENSODEG00000009653	MOB3C (ENSODEG00000009151)	ATPAF1 (ENSODEG00000010525) #36	TEX38 (ENSODEG00000010166) #37	EFCAB14 (ENSODEG00000008413)	ENSODEG00000007435
Long-tailed chinchilla	MODERN SPECIES	171	TOE1 (ENSCLAG00000003906)	TESK2 (ENSCLAG00000007745)	MMACHC (ENSCLAG00000011068)	ENSCLAG00000010656	AKR1A1 (ENSCLAG00000009484) #7	NASP (ENSCLAG00000005181) #10	CCDC17 (ENSCLAG00000004736) #11	GPBP1L1 (ENSCLAG00000004389) #12	TMEM69 (ENSCLAG00000004231) #14	IPP (ENSCLAG00000004172) #16	ENSCLAG00000004113	MAST2 (ENSCLAG00000010103) #17	PIK3R3 (ENSCLAG00000009454) #18	TSPAN1 (ENSCLAG00000007836) #20	POMGNT1 (ENSCLAG00000006560) #21	LURAP1 (ENSCLAG00000004742) #22	RAD54L (ENSCLAG00000004645) #23	LRRC41 (ENSCLAG00000005312) #24	ENSCLAG00000005279 #25	NSUN4 (ENSCLAG00000005205) #28	FAAH (ENSCLAG00000004917) #30	DMBX1 (ENSCLAG00000004842) #32	KNCN (ENSCLAG00000004788) #34	ENSCLAG00000004751	MKNK1 (ENSCLAG00000003888)	MOB3C (ENSCLAG00000006684)	ATPAF1 (ENSCLAG00000006456) #36	TEX38 (ENSCLAG00000006425) #37	EFCAB14 (ENSCLAG00000005792)	ENSCLAG00000005609	ENSCLAG00000005036
Guinea pig	MODERN SPECIES	133	ENSCPOG00000033680	TESK2 (ENSCPOG00000012459)	MMACHC (ENSCPOG00000014136)	PRDX1 (ENSCPOG00000014137)	AKR1A1 (ENSCPOG00000012718) #7	ENSCPOG00000011470 #10	CCDC17 (ENSCPOG00000011472) #11	GPBP1L1 (ENSCPOG00000011476) #12	TMEM69 (ENSCPOG00000009599) #14	IPP (ENSCPOG00000009600) #16	MAST2 (ENSCPOG00000013451) #17	PIK3R3 (ENSCPOG00000010150) #18	P3R3URF (ENSCPOG00000037878) #19	TSPAN1 (ENSCPOG00000005201) #20	POMGNT1 (ENSCPOG00000005204) #21	LURAP1 (ENSCPOG00000034598) #22	RAD54L (ENSCPOG00000006768) #23	LRRC41 (ENSCPOG00000006775) #24	ENSCPOG00000006779 #25	NSUN4 (ENSCPOG00000006781) #28	FAAH (ENSCPOG00000011399) #30	DMBX1 (ENSCPOG00000027279) #32	KNCN (ENSCPOG00000035083) #34	ENSCPOG00000035798 #35	MOB3C (ENSCPOG00000037412)	ATPAF1 (ENSCPOG00000035044) #36	TEX38 (ENSCPOG00000003355) #37	EFCAB14 (ENSCPOG00000003358)	ENSCPOG00000026008	ENSCPOG00000000227
Naked mole-rat female	MODERN SPECIES	26	AKR1A1 (ENSHGLG00000002413) #7	ENSHGLG00000002419 #10	CCDC17 (ENSHGLG00000001677) #11	ENSHGLG00000002490 #12	TMEM69 (ENSHGLG00000001915) #14	IPP (ENSHGLG00000001994) #16	ENSHGLG00000040135	ENSHGLG00000001388	ENSHGLG00000045620	MAST2 (ENSHGLG00000014177) #17	ENSHGLG00000001409	PIK3R3 (ENSHGLG00000001853) #18	P3R3URF (ENSHGLG00000001179) #19	TSPAN1 (ENSHGLG00000001782) #20	POMGNT1 (ENSHGLG00000002171) #21	LURAP1 (ENSHGLG00000043460) #22	ENSHGLG00000000753 #23	LRRC41 (ENSHGLG00000001422) #24	ENSHGLG00000035869 #25	ENSHGLG00000038747 #26	ENSHGLG00000047081 #28	ENSHGLG00000044714	FAAH (ENSHGLG00000041848) #30	DMBX1 (ENSHGLG00000000395) #32	KNCN (ENSHGLG00000042058) #34	MKNK1 (ENSHGLG00000032460)	MOB3C (ENSHGLG00000032969)	ATPAF1 (ENSHGLG00000040111) #36	TEX38 (ENSHGLG00000004105) #37	EFCAB14 (ENSHGLG00000005336)	ENSHGLG00000019567
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Marmotini	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464.a	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00960000189628	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Marmotini_b	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464.a	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00960000189628	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Arctic ground squirrel	MODERN SPECIES	190	TESK2 (ENSUPAG00010020788)	ENSUPAG00010020764	ENSUPAG00010020763	PRDX1 (ENSUPAG00010020760)	AKR1A1 (ENSUPAG00010020745) #7	NASP (ENSUPAG00010020690) #10	CCDC17 (ENSUPAG00010020667) #11	GPBP1L1 (ENSUPAG00010020630) #12	TMEM69 (ENSUPAG00010020622) #14	IPP (ENSUPAG00010020604) #16	MAST2 (ENSUPAG00010020550) #17	PIK3R3 (ENSUPAG00010020507) #18	P3R3URF (ENSUPAG00010020503) #19	TSPAN1 (ENSUPAG00010020497) #20	POMGNT1 (ENSUPAG00010020423) #21	LURAP1 (ENSUPAG00010020417) #22	RAD54L (ENSUPAG00010020396) #23	LRRC41 (ENSUPAG00010020390) #24	ENSUPAG00010020383 #25	ENSUPAG00010020379	FAAH (ENSUPAG00010020365) #30	DMBX1 (ENSUPAG00010020359) #32	TMEM275 (ENSUPAG00010020356) #33	KNCN (ENSUPAG00010020353) #34	ENSUPAG00010020341 #35	MOB3C (ENSUPAG00010020338)	ATPAF1 (ENSUPAG00010020324) #36	EFCAB14 (ENSUPAG00010020294)	ENSUPAG00010020267	ENSUPAG00010020244	CYP4B1 (ENSUPAG00010020229)
Squirrel	MODERN SPECIES	74	TESK2 (ENSSTOG00000010678)	ENSSTOG00000034321	MMACHC (ENSSTOG00000006090)	PRDX1 (ENSSTOG00000023413)	AKR1A1 (ENSSTOG00000013517) #7	NASP (ENSSTOG00000019683) #10	CCDC17 (ENSSTOG00000022686) #11	GPBP1L1 (ENSSTOG00000013491) #12	TMEM69 (ENSSTOG00000032547) #14	IPP (ENSSTOG00000013503) #16	MAST2 (ENSSTOG00000006001) #17	PIK3R3 (ENSSTOG00000006051) #18	P3R3URF (ENSSTOG00000033389) #19	TSPAN1 (ENSSTOG00000026291) #20	POMGNT1 (ENSSTOG00000009283) #21	LURAP1 (ENSSTOG00000009276) #22	RAD54L (ENSSTOG00000029125) #23	LRRC41 (ENSSTOG00000029075) #24	ENSSTOG00000033129	NSUN4 (ENSSTOG00000009794) #28	ENSSTOG00000033959 #26	FAAH (ENSSTOG00000011655) #30	DMBX1 (ENSSTOG00000011661) #32	KNCN (ENSSTOG00000026559) #34	ENSSTOG00000032933	MOB3C (ENSSTOG00000005399)	ATPAF1 (ENSSTOG00000005415) #36	ENSSTOG00000030628 #37	EFCAB14 (ENSSTOG00000016250)	CYP4B1 (ENSSTOG00000001409)	ENSSTOG00000013550
Alpin marmot	MODERN SPECIES	15	ENSMMMG00000019297	ENSMMMG00000019273	MMACHC (ENSMMMG00000019272)	PRDX1 (ENSMMMG00000019267)	AKR1A1 (ENSMMMG00000019263) #7	NASP (ENSMMMG00000019212) #10	CCDC17 (ENSMMMG00000019165) #11	GPBP1L1 (ENSMMMG00000019162) #12	TMEM69 (ENSMMMG00000019157) #14	IPP (ENSMMMG00000019149) #16	MAST2 (ENSMMMG00000019002) #17	PIK3R3 (ENSMMMG00000018977) #18	P3R3URF (ENSMMMG00000018949) #19	TSPAN1 (ENSMMMG00000018942) #20	POMGNT1 (ENSMMMG00000018549) #21	LURAP1 (ENSMMMG00000018543) #22	RAD54L (ENSMMMG00000018505) #23	LRRC41 (ENSMMMG00000018495) #24	ENSMMMG00000018488 #25	ENSMMMG00000018486	FAAH (ENSMMMG00000018402) #30	DMBX1 (ENSMMMG00000018386) #32	TMEM275 (ENSMMMG00000018381) #33	KNCN (ENSMMMG00000018376) #34	ENSMMMG00000018347 #35	MOB3C (ENSMMMG00000018342)	ATPAF1 (ENSMMMG00000018290) #36	EFCAB14 (ENSMMMG00000018258)	CYP4B1 (ENSMMMG00000018250)	ENSMMMG00000018229	ENSMMMG00000018225
Eurasian red squirrel	MODERN SPECIES		ENSSVLG00005006520	MMACHC (ENSSVLG00005006561)	PRDX1 (ENSSVLG00005006615)	AKR1A1 (ENSSVLG00005006685) #7	NASP (ENSSVLG00005006730) #10	CCDC17 (ENSSVLG00005006817) #11	ENSSVLG00005006933 #12	ENSSVLG00005006991 #14	IPP (ENSSVLG00005007023) #16	MAST2 (ENSSVLG00005007081) #17	PIK3R3 (ENSSVLG00005007240) #18	ENSSVLG00005007285	P3R3URF (ENSSVLG00005007305) #19	TSPAN1 (ENSSVLG00005007325) #20	POMGNT1 (ENSSVLG00005007377) #21	LURAP1 (ENSSVLG00005007410) #22	RAD54L (ENSSVLG00005007442) #23	LRRC41 (ENSSVLG00005007517) #24	ENSSVLG00005007591 #25	NSUN4 (ENSSVLG00005007637) #28	FAAH (ENSSVLG00005007733) #30	DMBX1 (ENSSVLG00005007784) #32	TMEM275 (ENSSVLG00005007823) #33	KNCN (ENSSVLG00005007856) #34	ENSSVLG00005007933 #35	MOB3C (ENSSVLG00005008013)	ATPAF1 (ENSSVLG00005008043) #36	EFCAB14 (ENSSVLG00005008138)	ENSSVLG00005008165	CYP4B1 (ENSSVLG00005008221)	ENSSVLG00005008487
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Kangaroo rat	MODERN SPECIES	352	Mmachc (ENSDORG00000008974)	ENSDORG00000026415	Prdx1 (ENSDORG00000008975)	Akr1a1 (ENSDORG00000009867) #7	Nasp (ENSDORG00000010961) #10	Ccdc17 (ENSDORG00000010964) #11	Gpbp1l1 (ENSDORG00000001704) #12	Tmem69 (ENSDORG00000029500) #14	Ipp (ENSDORG00000012870) #16	ENSDORG00000027777 #17	ENSDORG00000016502 #17	Pik3r3 (ENSDORG00000025153) #18	P3r3urf (ENSDORG00000026690) #19	Tspan1 (ENSDORG00000006100) #20	Pomgnt1 (ENSDORG00000006101) #21	Lurap1 (ENSDORG00000025353) #22	Rad54l (ENSDORG00000002632) #23	Lrrc41 (ENSDORG00000028319) #24	Uqcrh (ENSDORG00000025522) #25	ENSDORG00000006844 #28	Faah (ENSDORG00000015089) #30	Dmbx1 (ENSDORG00000023987) #32	Kncn (ENSDORG00000025447) #34	Mknk1 (ENSDORG00000007207)	Mob3c (ENSDORG00000007210)	Atpaf1 (ENSDORG00000007212) #36	Tex38 (ENSDORG00000006627) #37	Efcab14 (ENSDORG00000006628)	Cyp4b1 (ENSDORG00000002018)	ENSDORG00000002019	ENSDORG00000024423
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Muroidea	ANCESTRAL SPECIES	3	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Chinese hamster chok1gshd	MODERN SPECIES	111	Tesk2 (ENSCGRG00001024966)	Ccdc163 (ENSCGRG00001009735)	Mmachc (ENSCGRG00001019062)	Prdx1 (ENSCGRG00001019611)	AKR1A1 (ENSCGRG00001023544) #7	Nasp (ENSCGRG00001005027) #10	Ccdc17 (ENSCGRG00001015801) #11	Gpbp1l1 (ENSCGRG00001022489) #12	Tmem69 (ENSCGRG00001005140) #14	Ipp (ENSCGRG00001018588) #16	Mast2 (ENSCGRG00001023294) #17	Pik3r3 (ENSCGRG00001016378) #18	P3r3urf (ENSCGRG00001011615) #19	Tspan1 (ENSCGRG00001013103) #20	Pomgnt1 (ENSCGRG00001014301) #21	Lurap1 (ENSCGRG00001013238) #22	Rad54l (ENSCGRG00001014807) #23	Lrrc41 (ENSCGRG00001010037) #24	ENSCGRG00001011038 #25	ENSCGRG00001024563 #28	Nsun4 (ENSCGRG00001019730) #26	Faah (ENSCGRG00001021029) #30	Dmbx1 (ENSCGRG00001016330) #32	Tmem275 (ENSCGRG00001003497) #33	Kncn (ENSCGRG00001024146) #34	ENSCGRG00001007744 #35	Mob3c (ENSCGRG00001011170)	Atpaf1 (ENSCGRG00001012405) #36	Tex38 (ENSCGRG00001013204) #37	Efcab14 (ENSCGRG00001018066)	Cyp4b1 (ENSCGRG00001018150)
Golden Hamster	MODERN SPECIES	648	Toe1 (ENSMAUG00000022118)	Tesk2 (ENSMAUG00000007721)	Ccdc163 (ENSMAUG00000019469)	Mmachc (ENSMAUG00000009187)	Prdx1 (ENSMAUG00000011355)	Nasp (ENSMAUG00000011045) #10	Ccdc17 (ENSMAUG00000015965) #11	Gpbp1l1 (ENSMAUG00000003041) #12	Tmem69 (ENSMAUG00000022228) #14	Ipp (ENSMAUG00000007168) #16	ENSMAUG00000012324	Pik3r3 (ENSMAUG00000002444) #18	P3r3urf (ENSMAUG00000018602) #19	Tspan1 (ENSMAUG00000016996) #20	Pomgnt1 (ENSMAUG00000020842) #21	Lurap1 (ENSMAUG00000021605) #22	Rad54l (ENSMAUG00000020076) #23	Lrrc41 (ENSMAUG00000020141) #24	ENSMAUG00000019784	ENSMAUG00000007732 #28	Nsun4 (ENSMAUG00000013883) #26	Faah (ENSMAUG00000001088) #30	Dmbx1 (ENSMAUG00000013192) #32	Kncn (ENSMAUG00000017362) #34	ENSMAUG00000001517 #35	Mob3c (ENSMAUG00000003368)	Atpaf1 (ENSMAUG00000008609) #36	Tex38 (ENSMAUG00000013809) #37	Efcab14 (ENSMAUG00000019992)	Cyp4b1 (ENSMAUG00000011868)	ENSMAUG00000018793
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Prairie vole	MODERN SPECIES	193				ENSMOCG00000010812	Akr1a1 (ENSMOCG00000003120) #7	Nasp (ENSMOCG00000020218) #10	Ccdc17 (ENSMOCG00000019529) #11	Gpbp1l1 (ENSMOCG00000008597) #12	Tmem69 (ENSMOCG00000002055) #14	Ipp (ENSMOCG00000013185) #16	Mast2 (ENSMOCG00000010239) #17	Pik3r3 (ENSMOCG00000009969) #18	P3r3urf (ENSMOCG00000010726) #19	Tspan1 (ENSMOCG00000005309) #20	ENSMOCG00000009957 #21	Lurap1 (ENSMOCG00000014107) #22	Rad54l (ENSMOCG00000001778) #23	Lrrc41 (ENSMOCG00000014764) #24	Uqcrh (ENSMOCG00000001474) #25	Nsun4 (ENSMOCG00000018602) #26	ENSMOCG00000010041 #28	Faah (ENSMOCG00000015993) #30	Dmbx1 (ENSMOCG00000003287) #32	Kncn (ENSMOCG00000012291) #34	ENSMOCG00000008618 #35	Mob3c (ENSMOCG00000020495)	Atpaf1 (ENSMOCG00000017043) #36	Tex38 (ENSMOCG00000014568) #37	Efcab14 (ENSMOCG00000015034)	Cyp4b1 (ENSMOCG00000011934)
Northern American deer mouse	MODERN SPECIES	11	Tesk2 (ENSPEMG00000022010)	ENSPEMG00000000268	Mmachc (ENSPEMG00000026955)	ENSPEMG00000022257	Akr1a1 (ENSPEMG00000015504) #7	Nasp (ENSPEMG00000011490) #10	Ccdc17 (ENSPEMG00000022313) #11	Gpbp1l1 (ENSPEMG00000023022) #12	Tmem69 (ENSPEMG00000022999) #14	Ipp (ENSPEMG00000023410) #16	Mast2 (ENSPEMG00000022608) #17	Pik3r3 (ENSPEMG00000022142) #18	P3r3urf (ENSPEMG00000008723) #19	Tspan1 (ENSPEMG00000013826) #20	Pomgnt1 (ENSPEMG00000017535) #21	Lurap1 (ENSPEMG00000030650) #22	Rad54l (ENSPEMG00000011422) #23	Lrrc41 (ENSPEMG00000021931) #24	ENSPEMG00000024098 #25	ENSPEMG00000029801 #28	Faah (ENSPEMG00000008896) #30	Dmbx1 (ENSPEMG00000023516) #32	Tmem275 (ENSPEMG00000025552) #33	Kncn (ENSPEMG00000025397) #34	ENSPEMG00000022552 #35	Mob3c (ENSPEMG00000027471)	Atpaf1 (ENSPEMG00000028185) #36	Tex38 (ENSPEMG00000030507) #37	Efcab14 (ENSPEMG00000021842)	Cyp4b1 (ENSPEMG00000022964)	ENSPEMG00000023206
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Mus	ANCESTRAL SPECIES	3	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Ryukyu mouse	MODERN SPECIES	13	Toe1 (MGP_CAROLIEiJ_G0026342)	Tesk2 (MGP_CAROLIEiJ_G0026341)	Ccdc163 (MGP_CAROLIEiJ_G0026340)	Mmachc (MGP_CAROLIEiJ_G0026339)	Prdx1 (MGP_CAROLIEiJ_G0026338)	Akr1a1 (MGP_CAROLIEiJ_G0026337) #7	Nasp (MGP_CAROLIEiJ_G0026336) #10	Ccdc17 (MGP_CAROLIEiJ_G0026335) #11	Gpbp1l1 (MGP_CAROLIEiJ_G0026334) #12	Tmem69 (MGP_CAROLIEiJ_G0026333) #14	Ipp (MGP_CAROLIEiJ_G0026332) #16	Mast2 (MGP_CAROLIEiJ_G0026331) #17	Pik3r3 (MGP_CAROLIEiJ_G0026330) #18	P3r3urf (MGP_CAROLIEiJ_G0026329) #19	Tspan1 (MGP_CAROLIEiJ_G0026328) #20	Lurap1 (MGP_CAROLIEiJ_G0026327) #22	Pomgnt1 (MGP_CAROLIEiJ_G0026326) #21	Rad54l (MGP_CAROLIEiJ_G0026325) #23	Lrrc41 (MGP_CAROLIEiJ_G0026324) #24	Uqcrh (MGP_CAROLIEiJ_G0026323) #25	Nsun4 (MGP_CAROLIEiJ_G0026322) #26	Faah (MGP_CAROLIEiJ_G0026321) #30	Dmbx1 (MGP_CAROLIEiJ_G0026320) #32	Tmem275 (MGP_CAROLIEiJ_G0026319) #33	Kncn (MGP_CAROLIEiJ_G0026318) #34	Mknk1 (MGP_CAROLIEiJ_G0026317)	Mob3c (MGP_CAROLIEiJ_G0026316)	Atpaf1 (MGP_CAROLIEiJ_G0026315) #36	Tex38 (MGP_CAROLIEiJ_G0026314) #37	Efcab14 (MGP_CAROLIEiJ_G0026313)	Cyp4b1 (MGP_CAROLIEiJ_G0026312)
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441
Mouse	MODERN SPECIES	13	Tesk2 (ENSMUSG00000033985)	Ccdc163 (ENSMUSG00000028689)	Mmachc (ENSMUSG00000028690)	Prdx1 (ENSMUSG00000028691)	Akr1a1 (ENSMUSG00000028692) #7	Nasp (ENSMUSG00000028693) #10	Ccdc17 (ENSMUSG00000034035) #11	Gpbp1l1 (ENSMUSG00000034042) #12	Tmem69 (ENSMUSG00000055900) #14	Ipp (ENSMUSG00000028696) #16	Mast2 (ENSMUSG00000003810) #17	Pik3r3 (ENSMUSG00000028698) #18	Gm49337 (ENSMUSG00000111410)	P3r3urf (ENSMUSG00000078593) #19	Tspan1 (ENSMUSG00000028699) #20	Lurap1 (ENSMUSG00000028701) #22	Pomgnt1 (ENSMUSG00000028700) #21	Rad54l (ENSMUSG00000028702) #23	Lrrc41 (ENSMUSG00000028703) #24	Uqcrh (ENSMUSG00000063882) #25	Nsun4 (ENSMUSG00000028706) #26	Faah (ENSMUSG00000034171) #30	Dmbx1 (ENSMUSG00000028707) #32	Tmem275 (ENSMUSG00000034185) #33	Kncn (ENSMUSG00000073774) #34	Mknk1 (ENSMUSG00000028708)	Mob3c (ENSMUSG00000028709)	Atpaf1 (ENSMUSG00000028710) #36	Tex38 (ENSMUSG00000044556) #37	Efcab14 (ENSMUSG00000034210)	Cyp4b1 (ENSMUSG00000028713)
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Steppe mouse	MODERN SPECIES	2908	Ccdc163 (ENSMSIG00000013392)	Mmachc (ENSMSIG00000013741)	ENSMSIG00000013776	ENSMSIG00000013830 #7	Nasp (ENSMSIG00000013861) #10	Gpbp1l1 (ENSMSIG00000014139) #12	ENSMSIG00000014178	Tmem69 (ENSMSIG00000014197) #14	Ipp (ENSMSIG00000014220) #16	Mast2 (ENSMSIG00000014279) #17	ENSMSIG00000014744	Pik3r3 (ENSMSIG00000014768) #18	P3r3urf (ENSMSIG00000014803) #19	Tspan1 (ENSMSIG00000014810) #20	Pomgnt1 (ENSMSIG00000014833) #21	Lurap1 (ENSMSIG00000014888) #22	Rad54l (ENSMSIG00000014901) #23	Lrrc41 (ENSMSIG00000014928) #24	ENSMSIG00000014983 #25	ENSMSIG00000015002	ENSMSIG00000015007	ENSMSIG00000015016 #28	Faah (ENSMSIG00000015049) #30	Dmbx1 (ENSMSIG00000015099) #32	Tmem275 (ENSMSIG00000015119) #33	Kncn (ENSMSIG00000015125) #34	ENSMSIG00000015142 #35	Mob3c (ENSMSIG00000015218)	Atpaf1 (ENSMSIG00000015226) #36	Tex38 (ENSMSIG00000015281) #37	Efcab14 (ENSMSIG00000015293)
spretus	MODERN SPECIES	13	Toe1 (MGP_SPRETEiJ_G0027314)	Tesk2 (MGP_SPRETEiJ_G0027313)	Ccdc163 (MGP_SPRETEiJ_G0027312)	Mmachc (MGP_SPRETEiJ_G0027311)	Prdx1 (MGP_SPRETEiJ_G0027310)	Akr1a1 (MGP_SPRETEiJ_G0027309) #7	Nasp (MGP_SPRETEiJ_G0027308) #10	Ccdc17 (MGP_SPRETEiJ_G0027307) #11	Gpbp1l1 (MGP_SPRETEiJ_G0027306) #12	Tmem69 (MGP_SPRETEiJ_G0027305) #14	Ipp (MGP_SPRETEiJ_G0027304) #16	Mast2 (MGP_SPRETEiJ_G0027303) #17	Pik3r3 (MGP_SPRETEiJ_G0027302) #18	P3r3urf (MGP_SPRETEiJ_G0027301) #19	Tspan1 (MGP_SPRETEiJ_G0027300) #20	Lurap1 (MGP_SPRETEiJ_G0027299) #22	Pomgnt1 (MGP_SPRETEiJ_G0027298) #21	Rad54l (MGP_SPRETEiJ_G0027297) #23	Lrrc41 (MGP_SPRETEiJ_G0027296) #24	Uqcrh (MGP_SPRETEiJ_G0027295) #25	Nsun4 (MGP_SPRETEiJ_G0027294) #26	Faah (MGP_SPRETEiJ_G0027293) #30	Dmbx1 (MGP_SPRETEiJ_G0027292) #32	Tmem275 (MGP_SPRETEiJ_G0027291) #33	Kncn (MGP_SPRETEiJ_G0027290) #34	Mknk1 (MGP_SPRETEiJ_G0027289)	Mob3c (MGP_SPRETEiJ_G0027288)	Atpaf1 (MGP_SPRETEiJ_G0027287) #36	Tex38 (MGP_SPRETEiJ_G0027286) #37	Efcab14 (MGP_SPRETEiJ_G0027285)	Cyp4b1 (MGP_SPRETEiJ_G0027284)
Shrew mouse	MODERN SPECIES	19	Tesk2 (MGP_PahariEiJ_G0028673)	Ccdc163 (MGP_PahariEiJ_G0028672)	Mmachc (MGP_PahariEiJ_G0028671)	Prdx1 (MGP_PahariEiJ_G0028670)	Akr1a1 (MGP_PahariEiJ_G0028669) #7	Nasp (MGP_PahariEiJ_G0028668) #10	Ccdc17 (MGP_PahariEiJ_G0028667) #11	Gpbp1l1 (MGP_PahariEiJ_G0028666) #12	Tmem69 (MGP_PahariEiJ_G0028665) #14	Ipp (MGP_PahariEiJ_G0028664) #16	Mast2 (MGP_PahariEiJ_G0028663) #17	Pik3r3 (MGP_PahariEiJ_G0028662) #18	P3r3urf (MGP_PahariEiJ_G0028661) #19	Tspan1 (MGP_PahariEiJ_G0028660) #20	Pomgnt1 (MGP_PahariEiJ_G0028659) #21	Lurap1 (MGP_PahariEiJ_G0028658) #22	Rad54l (MGP_PahariEiJ_G0028657) #23	Lrrc41 (MGP_PahariEiJ_G0028656) #24	Uqcrh (MGP_PahariEiJ_G0028655) #25	Nsun4 (MGP_PahariEiJ_G0028654) #26	Faah (MGP_PahariEiJ_G0028653) #30	Dmbx1 (MGP_PahariEiJ_G0028652) #32	Tmem275 (MGP_PahariEiJ_G0028651) #33	Kncn (MGP_PahariEiJ_G0028650) #34	Mknk1 (MGP_PahariEiJ_G0028649)	Mob3c (MGP_PahariEiJ_G0028648)	Atpaf1 (MGP_PahariEiJ_G0028647) #36	Tex38 (MGP_PahariEiJ_G0028646) #37	Efcab14 (MGP_PahariEiJ_G0028645)	Cyp4b1 (MGP_PahariEiJ_G0028644)	MGP_PahariEiJ_G0028643
Rat	MODERN SPECIES	15	Tesk2 (ENSRNOG00000017282)	Ccdc163 (ENSRNOG00000022953)	Mmachc (ENSRNOG00000017233)	Prdx1 (ENSRNOG00000017194)	Akr1a1 (ENSRNOG00000016727) #7	Nasp (ENSRNOG00000016454) #10	Ccdc17 (ENSRNOG00000023216) #11	Gpbp1l1 (ENSRNOG00000037595) #12	Tmem69 (ENSRNOG00000029152) #14	Ipp (ENSRNOG00000016183) #16	Mast2 (ENSRNOG00000058476) #17	Pik3r3 (ENSRNOG00000000145) #18	P3r3urf (ENSRNOG00000049874) #19	Tspan1 (ENSRNOG00000023320) #20	Pomgnt1 (ENSRNOG00000023455) #21	Lurap1 (ENSRNOG00000062943) #22	Rad54l (ENSRNOG00000013148) #23	Lrrc41 (ENSRNOG00000013642) #24	Uqcrh (ENSRNOG00000012550) #25	Nsun4 (ENSRNOG00000046192) #26	Nsun4 (ENSRNOG00000012020) #28	Faah (ENSRNOG00000045949) #30	Dmbx1 (ENSRNOG00000010835) #32	Tmem275 (ENSRNOG00000066278) #33	Kncn (ENSRNOG00000037618) #34	Mknk1 (ENSRNOG00000010381) #35	Mob3c (ENSRNOG00000037620)	Atpaf1 (ENSRNOG00000010169) #36	Tex38 (ENSRNOG00000010162) #37	Efcab14 (ENSRNOG00000010091)	Cyp4b1 (ENSRNOG00000055078)
Upper Galilee mountains blind mole rat	MODERN SPECIES	612				ENSNGAG00000022751	Nasp (ENSNGAG00000016214) #10	Ccdc17 (ENSNGAG00000022263) #11	Gpbp1l1 (ENSNGAG00000023885) #12	Tmem69 (ENSNGAG00000016321) #14	Ipp (ENSNGAG00000017406) #16	ENSNGAG00000022633 #17	ENSNGAG00000024080 #17	Pik3r3 (ENSNGAG00000023327) #18	P3r3urf (ENSNGAG00000007932) #19	Tspan1 (ENSNGAG00000012097) #20	Pomgnt1 (ENSNGAG00000018844) #21	Lurap1 (ENSNGAG00000023881) #22	Rad54l (ENSNGAG00000024213) #23	ENSNGAG00000003373 #24	Uqcrh (ENSNGAG00000014974) #25	ENSNGAG00000023626 #28	Nsun4 (ENSNGAG00000023728) #26	Faah (ENSNGAG00000019634) #30	Dmbx1 (ENSNGAG00000022326) #32	Kncn (ENSNGAG00000002764) #34	ENSNGAG00000023036 #35	Mob3c (ENSNGAG00000020784)	Atpaf1 (ENSNGAG00000001871) #36	Tex38 (ENSNGAG00000013668) #37	Efcab14 (ENSNGAG00000017934)
Lesser Egyptian jerboa	MODERN SPECIES	225	ENSJJAG00000013740	Akr1a1 (ENSJJAG00000013899) #7	ENSJJAG00000014257 #10	Ccdc17 (ENSJJAG00000014801) #11	Gpbp1l1 (ENSJJAG00000015116) #12	Tmem69 (ENSJJAG00000015298) #14	Ipp (ENSJJAG00000015473) #16	ENSJJAG00000015780	ENSJJAG00000016010 #17	ENSJJAG00000016146	ENSJJAG00000018165 #17	Pik3r3 (ENSJJAG00000018819) #18	P3r3urf (ENSJJAG00000019291) #19	Tspan1 (ENSJJAG00000019605) #20	Pomgnt1 (ENSJJAG00000019921) #21	Lurap1 (ENSJJAG00000000064) #22	ENSJJAG00000000235 #23	ENSJJAG00000000929 #24	Uqcrh (ENSJJAG00000001349) #25	ENSJJAG00000002240 #28	Nsun4 (ENSJJAG00000002968) #26	Faah (ENSJJAG00000005088) #30	ENSJJAG00000012011	Dmbx1 (ENSJJAG00000006632) #32	Tmem275 (ENSJJAG00000007503) #33	Kncn (ENSJJAG00000007732) #34	Mknk1 (ENSJJAG00000009067)	Mob3c (ENSJJAG00000010451)	ENSJJAG00000010592 #36	Tex38 (ENSJJAG00000010819) #37	Efcab14 (ENSJJAG00000016349)
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00900000143563 #9	ENSGT00940000154277.a.b.a.b	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Eulipotyphla	ANCESTRAL SPECIES	85														ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25
Common shrew	MODERN SPECIES	1348																LURAP1 (ENSSARG00000006677) #22	RAD54L (ENSSARG00000006689) #23	LRRC41 (ENSSARG00000006728) #24	ENSSARG00000006763 #25
Hedgehog	MODERN SPECIES	1909														TSPAN1 (ENSEEUG00000007815) #20	POMGNT1 (ENSEEUG00000007952) #21	LURAP1 (ENSEEUG00000000895) #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00900000143563.a #9	ENSGT00940000154277.a.b.a.b	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00900000143563.a #9	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Suina	ANCESTRAL SPECIES	27	ENSGT00990000211889	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00900000143563.a #9	ENSGT00390000016650 #10	ENSGT00940000171199	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Chacoan peccary	MODERN SPECIES	54	ENSCWAG00000011900	MMACHC (ENSCWAG00000011828)	PRDX1 (ENSCWAG00000011743)	AKR1A1 (ENSCWAG00000011701) #7	ENSCWAG00000011617 #9	NASP (ENSCWAG00000011154) #10	ENSCWAG00000011093	GPBP1L1 (ENSCWAG00000011051) #12	TMEM69 (ENSCWAG00000011008) #14	IPP (ENSCWAG00000010964) #16	MAST2 (ENSCWAG00000010628) #17	PIK3R3 (ENSCWAG00000010438) #18	P3R3URF (ENSCWAG00000010396) #19	TSPAN1 (ENSCWAG00000010332) #20	POMGNT1 (ENSCWAG00000010307) #21	LURAP1 (ENSCWAG00000010268) #22	RAD54L (ENSCWAG00000010094) #23	LRRC41 (ENSCWAG00000010031) #24	ENSCWAG00000009971 #25	NSUN4 (ENSCWAG00000009918) #28	ENSCWAG00000009892	FAAH (ENSCWAG00000009787) #30	ENSCWAG00000009733 #31	DMBX1 (ENSCWAG00000009673) #32	KNCN (ENSCWAG00000009570) #34	MKNK1 (ENSCWAG00000009368)	MOB3C (ENSCWAG00000009326)	ATPAF1 (ENSCWAG00000009076) #36	TEX38 (ENSCWAG00000008969) #37	EFCAB14 (ENSCWAG00000008901)	CYP4B1 (ENSCWAG00000008498)
Pig	MODERN SPECIES	14	ENSSSCG00000046843	MMACHC (ENSSSCG00000037354)	PRDX1 (ENSSSCG00000003914)	AKR1A1 (ENSSSCG00000029256) #7	ENSSSCG00000035907 #9	NASP (ENSSSCG00000029573) #10	ENSSSCG00000021448	GPBP1L1 (ENSSSCG00000028097) #12	TMEM69 (ENSSSCG00000034035) #14	IPP (ENSSSCG00000040796) #16	MAST2 (ENSSSCG00000003913) #17	PIK3R3 (ENSSSCG00000003909) #18	P3R3URF (ENSSSCG00000050383) #19	TSPAN1 (ENSSSCG00000003908) #20	POMGNT1 (ENSSSCG00000029145) #21	LURAP1 (ENSSSCG00000026991) #22	RAD54L (ENSSSCG00000003905) #23	LRRC41 (ENSSSCG00000003904) #24	ENSSSCG00000003903 #25	ENSSSCG00000045959 #26	NSUN4 (ENSSSCG00000038280) #28	FAAH (ENSSSCG00000003901) #30	DMBX1 (ENSSSCG00000003900) #32	TMEM275 (ENSSSCG00000063244) #33	KNCN (ENSSSCG00000058745) #34	MKNK1 (ENSSSCG00000003898)	MOB3C (ENSSSCG00000003897)	ATPAF1 (ENSSSCG00000038657) #36	TEX38 (ENSSSCG00000055453) #37	EFCAB14 (ENSSSCG00000003895)	CYP4B1 (ENSSSCG00000003894)
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Cetacea	ANCESTRAL SPECIES		ENSGT00940000165040	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n.k.a	ENSGT00940000156539.q #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.cb.a #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00950000182958.a.b.b.j.l	ENSGT00940000155173.i.a
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000165040	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n.k.a	ENSGT00940000156539.q #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.cb.a #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00950000182958.a.b.b.j.l	ENSGT00940000155173.j
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000165040	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n.k.a	ENSGT00940000156539.q #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.cb.a #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000155173.j.a	ENSGT00940000160927
Dolphin	MODERN SPECIES	1874																LURAP1 (ENSTTRG00000006311) #22	RAD54L (ENSTTRG00000006315) #23	LRRC41 (ENSTTRG00000006324) #24	ENSTTRG00000006326 #25
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000165040	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n.k.a	ENSGT00940000156539.q #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.cb.a #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000155173.i.b	ENSGT00940000161441.c.b.a
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000165040	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n.k.a	ENSGT00940000156539.q #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860.cb.a #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000155173.i.b	ENSGT00940000161441.c.b.a
Narwhal	MODERN SPECIES	304	TOE1 (ENSMMNG00015005124)	TESK2 (ENSMMNG00015005100)	CCDC163 (ENSMMNG00015005086)	MMACHC (ENSMMNG00015005078)	ENSMMNG00015005060	ENSMMNG00015005045 #7	NASP (ENSMMNG00015004977) #10	CCDC17 (ENSMMNG00015004922) #11	TMEM69 (ENSMMNG00015004911) #14	IPP (ENSMMNG00015004905) #16	MAST2 (ENSMMNG00015004885) #17	PIK3R3 (ENSMMNG00015004871) #18	P3R3URF (ENSMMNG00015004866) #19	TSPAN1 (ENSMMNG00015004862) #20	POMGNT1 (ENSMMNG00015004856) #21	LURAP1 (ENSMMNG00015004850) #22	RAD54L (ENSMMNG00015018465) #23	LRRC41 (ENSMMNG00015018370) #24	ENSMMNG00015018332 #25	NSUN4 (ENSMMNG00015018308) #28	FAAH (ENSMMNG00015018270) #30	DMBX1 (ENSMMNG00015018243) #32	KNCN (ENSMMNG00015018209) #34	MKNK1 (ENSMMNG00015018022)	MOB3C (ENSMMNG00015017953)	ATPAF1 (ENSMMNG00015017841) #36	TEX38 (ENSMMNG00015017799) #37	EFCAB14 (ENSMMNG00015017756)	ENSMMNG00015017717	ENSMMNG00015017692	ENSMMNG00015017646
Beluga whale	MODERN SPECIES	74	TESK2 (ENSDLEG00000013577)	ENSDLEG00000013601	CCDC163 (ENSDLEG00000013618)	MMACHC (ENSDLEG00000013639)	PRDX1 (ENSDLEG00000013654)	AKR1A1 (ENSDLEG00000013676) #7	NASP (ENSDLEG00000013715) #10	CCDC17 (ENSDLEG00000013779) #11	GPBP1L1 (ENSDLEG00000013869) #12	IPP (ENSDLEG00000013888) #16	TMEM69 (ENSDLEG00000013909) #14	MAST2 (ENSDLEG00000013943) #17	PIK3R3 (ENSDLEG00000014101) #18	TSPAN1 (ENSDLEG00000014137) #20	POMGNT1 (ENSDLEG00000014193) #21	LURAP1 (ENSDLEG00000014239) #22	RAD54L (ENSDLEG00000014261) #23	LRRC41 (ENSDLEG00000014281) #24	ENSDLEG00000014305 #25	NSUN4 (ENSDLEG00000014317) #28	ENSDLEG00000014326 #26	FAAH (ENSDLEG00000014349) #30	DMBX1 (ENSDLEG00000014468) #32	ENSDLEG00000014480	MKNK1 (ENSDLEG00000014496)	MOB3C (ENSDLEG00000014521)	ATPAF1 (ENSDLEG00000014541) #36	TEX38 (ENSDLEG00000014565) #37	EFCAB14 (ENSDLEG00000014585)	ENSDLEG00000014626	ENSDLEG00000014649
Vaquita	MODERN SPECIES		TOE1 (ENSPSNG00000005794)	TESK2 (ENSPSNG00000005820)	ENSPSNG00000005883	MMACHC (ENSPSNG00000005938)	ENSPSNG00000005966 #7	NASP (ENSPSNG00000006058) #10	ENSPSNG00000006184	GPBP1L1 (ENSPSNG00000006214) #12	TMEM69 (ENSPSNG00000006236) #14	IPP (ENSPSNG00000006265) #16	MAST2 (ENSPSNG00000006362) #17	PIK3R3 (ENSPSNG00000006562) #18	P3R3URF (ENSPSNG00000006617) #19	TSPAN1 (ENSPSNG00000006656) #20	POMGNT1 (ENSPSNG00000006706) #21	LURAP1 (ENSPSNG00000006772) #22	RAD54L (ENSPSNG00000006808) #23	LRRC41 (ENSPSNG00000006870) #24	ENSPSNG00000006932 #25	NSUN4 (ENSPSNG00000006968) #28	FAAH (ENSPSNG00000007076) #30	DMBX1 (ENSPSNG00000007136) #32	KNCN (ENSPSNG00000007199) #34	MKNK1 (ENSPSNG00000007285)	MOB3C (ENSPSNG00000007480)	ATPAF1 (ENSPSNG00000007541) #36	TEX38 (ENSPSNG00000007691) #37	EFCAB14 (ENSPSNG00000007725)	ENSPSNG00000007825	ENSPSNG00000008156	ENSPSNG00000008408
Sperm whale	MODERN SPECIES	15	BEST4 (ENSPCTG00005019737)	RPS8 (ENSPCTG00005019669)	ENSPCTG00005019639	ENSPCTG00005019615	KIF2C (ENSPCTG00005019390)	AKR1A1 (ENSPCTG00005019332) #7	NASP (ENSPCTG00005018744) #10	CCDC17 (ENSPCTG00005018379) #11	GPBP1L1 (ENSPCTG00005018338) #12	TMEM69 (ENSPCTG00005018297) #14	IPP (ENSPCTG00005018178) #16	PIK3R3 (ENSPCTG00005018079) #18	P3R3URF (ENSPCTG00005018046) #19	TSPAN1 (ENSPCTG00005018018) #20	POMGNT1 (ENSPCTG00005017887) #21	LURAP1 (ENSPCTG00005017847) #22	RAD54L (ENSPCTG00005017790) #23	LRRC41 (ENSPCTG00005017698) #24	ENSPCTG00005017654 #25	KNCN (ENSPCTG00005017520) #34	MKNK1 (ENSPCTG00005017143)	ATPAF1 (ENSPCTG00005016892) #36	TEX38 (ENSPCTG00005016811) #37	EFCAB14 (ENSPCTG00005016666)	ENSPCTG00005016621	ENSPCTG00005016599	CYP4B1 (ENSPCTG00005016063)	ENSPCTG00005015607	ENSPCTG00005014892	PDZK1IP1 (ENSPCTG00005014810)	TAL1 (ENSPCTG00005014754)
Blue whale	MODERN SPECIES		ENSBMSG00010012743	ENSBMSG00010012753	ENSBMSG00010012764	MMACHC (ENSBMSG00010012775)	ENSBMSG00010004337 #7	NASP (ENSBMSG00010004378) #10	CCDC17 (ENSBMSG00010004432) #11	GPBP1L1 (ENSBMSG00010004471) #12	TMEM69 (ENSBMSG00010004484) #14	IPP (ENSBMSG00010004506) #16	MAST2 (ENSBMSG00010004569) #17	PIK3R3 (ENSBMSG00010004641) #18	P3R3URF (ENSBMSG00010004663) #19	TSPAN1 (ENSBMSG00010004673) #20	POMGNT1 (ENSBMSG00010004690) #21	LURAP1 (ENSBMSG00010004712) #22	RAD54L (ENSBMSG00010004725) #23	LRRC41 (ENSBMSG00010004731) #24	ENSBMSG00010004751 #25	NSUN4 (ENSBMSG00010004759) #28	FAAH (ENSBMSG00010004779) #30	DMBX1 (ENSBMSG00010004794) #32	KNCN (ENSBMSG00010004806) #34	MKNK1 (ENSBMSG00010004836)	MOB3C (ENSBMSG00010004861)	ATPAF1 (ENSBMSG00010004876) #36	TEX38 (ENSBMSG00010004896) #37	EFCAB14 (ENSBMSG00010004906)	ENSBMSG00010004918	ENSBMSG00010004923	ENSBMSG00010004944
Pecora	ANCESTRAL SPECIES	2	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Percora_a	ANCESTRAL SPECIES	1	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Bovidae	ANCESTRAL SPECIES	1	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Bovinae	ANCESTRAL SPECIES	1	ENSGT01000000221833	ENSGT00940000165040	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d
Bos	ANCESTRAL SPECIES		ENSGT00940000165040	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT01100000263480.a.b.a.b.a.a.b.b.b	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d
Bos_a	ANCESTRAL SPECIES	1	ENSGT00940000165040	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT01100000263480.a.b.a.b.a.a.b.b.b	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d
Wild yak	MODERN SPECIES	630	ENSBMUG00000017341	CCDC163 (ENSBMUG00000017350)	MMACHC (ENSBMUG00000017361)	ENSBMUG00000017429	AKR1A1 (ENSBMUG00000017439) #7	NASP (ENSBMUG00000017479) #10	CCDC17 (ENSBMUG00000017536) #11	GPBP1L1 (ENSBMUG00000017580) #12	TMEM69 (ENSBMUG00000017619) #14	IPP (ENSBMUG00000017678) #16	MAST2 (ENSBMUG00000018202) #17	PIK3R3 (ENSBMUG00000018587) #18	P3R3URF (ENSBMUG00000018621) #19	TSPAN1 (ENSBMUG00000018631) #20	POMGNT1 (ENSBMUG00000018708) #21	LURAP1 (ENSBMUG00000018743) #22	RAD54L (ENSBMUG00000018748) #23	LRRC41 (ENSBMUG00000018769) #24	ENSBMUG00000018791 #25	NSUN4 (ENSBMUG00000018801) #28	FAAH (ENSBMUG00000018835) #30	ENSBMUG00000018858 #31	DMBX1 (ENSBMUG00000018871) #32	KNCN (ENSBMUG00000018887) #34	MKNK1 (ENSBMUG00000019092)	MOB3C (ENSBMUG00000019135)	ATPAF1 (ENSBMUG00000019157) #36	TEX38 (ENSBMUG00000019206) #37	EFCAB14 (ENSBMUG00000019237)	CYP4B1 (ENSBMUG00000019275)	ENSBMUG00000019388
Domestic yak	MODERN SPECIES	22	PRDX1 (ENSBGRG00000002832)	AKR1A1 (ENSBGRG00000002800) #7	ENSBGRG00000002784	NASP (ENSBGRG00000002640) #10	CCDC17 (ENSBGRG00000002607) #11	GPBP1L1 (ENSBGRG00000002587) #12	TMEM69 (ENSBGRG00000002565) #14	ENSBGRG00000002559	IPP (ENSBGRG00000002507) #16	MAST2 (ENSBGRG00000002399) #17	ENSBGRG00000002381	PIK3R3 (ENSBGRG00000002338) #18	P3R3URF (ENSBGRG00000002322) #19	TSPAN1 (ENSBGRG00000002304) #20	POMGNT1 (ENSBGRG00000002161) #21	LURAP1 (ENSBGRG00000002137) #22	RAD54L (ENSBGRG00000002083) #23	LRRC41 (ENSBGRG00000002054) #24	ENSBGRG00000002038 #25	ENSBGRG00000002005 #25	NSUN4 (ENSBGRG00000001974) #28	ENSBGRG00000001876 #30	DMBX1 (ENSBGRG00000001838) #32	TMEM275 (ENSBGRG00000001830) #33	KNCN (ENSBGRG00000001814) #34	MKNK1 (ENSBGRG00000001742)	MOB3C (ENSBGRG00000001707)	ATPAF1 (ENSBGRG00000001598) #36	TEX38 (ENSBGRG00000001576) #37	EFCAB14 (ENSBGRG00000001550)	CYP4B1 (ENSBGRG00000001457)
Bos_b	ANCESTRAL SPECIES	1	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT01100000263480.a.b.a.b.a.a.b.b.b	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d
Cow	MODERN SPECIES	22	TESK2 (ENSBTAG00000011244)	ENSBTAG00000017029	MMACHC (ENSBTAG00000017027)	PRDX1 (ENSBTAG00000003642)	AKR1A1 (ENSBTAG00000000497) #7	NASP (ENSBTAG00000015346) #10	CCDC17 (ENSBTAG00000008808) #11	GPBP1L1 (ENSBTAG00000008810) #12	TMEM69 (ENSBTAG00000052979) #14	ENSBTAG00000051822	IPP (ENSBTAG00000016377) #16	MAST2 (ENSBTAG00000020444) #17	PIK3R3 (ENSBTAG00000002979) #18	P3R3URF (ENSBTAG00000048829) #19	TSPAN1 (ENSBTAG00000013320) #20	LURAP1 (ENSBTAG00000024144) #22	POMGNT1 (ENSBTAG00000013322) #21	RAD54L (ENSBTAG00000019901) #23	LRRC41 (ENSBTAG00000045664) #24	UQCRH (ENSBTAG00000009603) #25	NSUN4 (ENSBTAG00000015891) #28	FAAH (ENSBTAG00000007507) #30	ENSBTAG00000054510	ENSBTAG00000037858 #31	DMBX1 (ENSBTAG00000009625) #32	TMEM275 (ENSBTAG00000053814) #33	KNCN (ENSBTAG00000030532) #34	MKNK1 (ENSBTAG00000019933)	MOB3C (ENSBTAG00000023551)	ATPAF1 (ENSBTAG00000000094) #36	TEX38 (ENSBTAG00000046812) #37
Hybrid Bos Indicus	MODERN SPECIES	22	TESK2 (ENSBIXG00005000947)	ENSBIXG00005000952	MMACHC (ENSBIXG00005000959)	ENSBIXG00005010891	ENSBIXG00005010914	NASP (ENSBIXG00005001013) #10	ENSBIXG00005011146	GPBP1L1 (ENSBIXG00005011221) #12	TMEM69 (ENSBIXG00005001050) #14	IPP (ENSBIXG00005011243) #16	MAST2 (ENSBIXG00005001084) #17	PIK3R3 (ENSBIXG00005011410) #18	P3R3URF (ENSBIXG00005011452) #19	TSPAN1 (ENSBIXG00005011467) #20	POMGNT1 (ENSBIXG00005011564) #21	LURAP1 (ENSBIXG00005011609) #22	RAD54L (ENSBIXG00005011638) #23	LRRC41 (ENSBIXG00005001150) #24	ENSBIXG00005011690 #25	NSUN4 (ENSBIXG00005011707) #28	FAAH (ENSBIXG00005011771) #30	ENSBIXG00005011831 #31	DMBX1 (ENSBIXG00005011839) #32	TMEM275 (ENSBIXG00005001181) #33	KNCN (ENSBIXG00005011880) #34	MKNK1 (ENSBIXG00005006328)	MOB3C (ENSBIXG00005001231)	ATPAF1 (ENSBIXG00005012121) #36	TEX38 (ENSBIXG00005012152) #37	EFCAB14 (ENSBIXG00005012188)	CYP4B1 (ENSBIXG00005001270)
American bison	MODERN SPECIES	3172	CCDC163 (ENSBBBG00000008918)	MMACHC (ENSBBBG00000016244)	PRDX1 (ENSBBBG00000016232)	ENSBBBG00000016198	AKR1A1 (ENSBBBG00000016192) #7	NASP (ENSBBBG00000016147) #10	CCDC17 (ENSBBBG00000015992) #11	GPBP1L1 (ENSBBBG00000015933) #12	TMEM69 (ENSBBBG00000015914) #14	IPP (ENSBBBG00000015907) #16	MAST2 (ENSBBBG00000015890) #17	PIK3R3 (ENSBBBG00000015789) #18	P3R3URF (ENSBBBG00000015715) #19	TSPAN1 (ENSBBBG00000015713) #20	POMGNT1 (ENSBBBG00000003921) #21	LURAP1 (ENSBBBG00000003915) #22	RAD54L (ENSBBBG00000015678) #23	LRRC41 (ENSBBBG00000015647) #24	ENSBBBG00000003452 #25	NSUN4 (ENSBBBG00000003464) #28	FAAH (ENSBBBG00000015607) #30	ENSBBBG00000003883 #31	DMBX1 (ENSBBBG00000015504) #32	KNCN (ENSBBBG00000003859) #34	MKNK1 (ENSBBBG00000015483)	MOB3C (ENSBBBG00000003833)	ATPAF1 (ENSBBBG00000008375) #36	TEX38 (ENSBBBG00000015355) #37	EFCAB14 (ENSBBBG00000003824)
Caprinae	ANCESTRAL SPECIES	2	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b.n	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b.f #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765.g #36	ENSGT00390000016446 #37	ENSGT00390000011196
Goat	MODERN SPECIES	22	ENSCHIG00000016357	ENSCHIG00000006672	TMSB4X (ENSCHIG00000012574)	AKR1A1 (ENSCHIG00000005900) #7	NASP (ENSCHIG00000014381) #10	ENSCHIG00000016081 #11	ENSCHIG00000022480 #12	ENSCHIG00000003469	TMEM69 (ENSCHIG00000022471) #14	IPP (ENSCHIG00000023256) #16	MAST2 (ENSCHIG00000022319) #17	PIK3R3 (ENSCHIG00000015779) #18	P3R3URF (ENSCHIG00000014270) #19	TSPAN1 (ENSCHIG00000018316) #20	POMGNT1 (ENSCHIG00000014882) #21	LURAP1 (ENSCHIG00000013931) #22	RAD54L (ENSCHIG00000020118) #23	LRRC41 (ENSCHIG00000027187) #24	ENSCHIG00000013936 #25	NSUN4 (ENSCHIG00000024189) #28	FAAH (ENSCHIG00000022289) #30	DMBX1 (ENSCHIG00000018374) #32	KNCN (ENSCHIG00000012933) #34	MKNK1 (ENSCHIG00000025017)	MOB3C (ENSCHIG00000017303)	ENSCHIG00000024752 #36	TEX38 (ENSCHIG00000019654) #37	EFCAB14 (ENSCHIG00000021934)	CYP4B1 (ENSCHIG00000010220)	ENSCHIG00000006577	ENSCHIG00000008252
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020000128	MMACHC (ENSOARG00020000138)	PRDX1 (ENSOARG00020000156)	AKR1A1 (ENSOARG00020000189) #7	ENSOARG00020000265 #10	CCDC17 (ENSOARG00020000364) #11	GPBP1L1 (ENSOARG00020000433) #12	TMEM69 (ENSOARG00020000462) #14	IPP (ENSOARG00020000478) #16	ENSOARG00020000500	MAST2 (ENSOARG00020000575) #17	PIK3R3 (ENSOARG00020000796) #18	P3R3URF (ENSOARG00020000858) #19	TSPAN1 (ENSOARG00020000865) #20	POMGNT1 (ENSOARG00020000885) #21	LURAP1 (ENSOARG00020000928) #22	RAD54L (ENSOARG00020000936) #23	LRRC41 (ENSOARG00020000971) #24	UQCRH (ENSOARG00020000996) #25	NSUN4 (ENSOARG00020001022) #28	ENSOARG00020001036 #26	FAAH (ENSOARG00020001048) #30	ENSOARG00020001062 #31	DMBX1 (ENSOARG00020001077) #32	TMEM275 (ENSOARG00020001085) #33	KNCN (ENSOARG00020001096) #34	MKNK1 (ENSOARG00020001122)	MOB3C (ENSOARG00020001167)	ATPAF1 (ENSOARG00020001189) #36	TEX38 (ENSOARG00020001250) #37	EFCAB14 (ENSOARG00020001264)
Siberian musk deer	MODERN SPECIES	340										ENSMMSG00000004500	MAST2 (ENSMMSG00000004421) #17	PIK3R3 (ENSMMSG00000004360) #18	P3R3URF (ENSMMSG00000004335) #19	TSPAN1 (ENSMMSG00000004321) #20	POMGNT1 (ENSMMSG00000019816) #21	LURAP1 (ENSMMSG00000019798) #22	RAD54L (ENSMMSG00000019732) #23	LRRC41 (ENSMMSG00000019692) #24	ENSMMSG00000019655 #25	ENSMMSG00000019597	NSUN4 (ENSMMSG00000019582) #28	FAAH (ENSMMSG00000019549) #30	ENSMMSG00000019482 #31	DMBX1 (ENSMMSG00000019443) #32	TMEM275 (ENSMMSG00000019433) #33	KNCN (ENSMMSG00000019379) #34	MKNK1 (ENSMMSG00000019302)	MOB3C (ENSMMSG00000019263)	ENSMMSG00000019244	ATPAF1 (ENSMMSG00000019161) #36	TEX38 (ENSMMSG00000019113) #37
Yarkand deer	MODERN SPECIES	12	PRDX1 (ENSCHYG00000014220)	AKR1A1 (ENSCHYG00000014116) #7	ENSCHYG00000013571 #10	CCDC17 (ENSCHYG00000026094) #11	ENSCHYG00000026088	GPBP1L1 (ENSCHYG00000026077) #12	ENSCHYG00000026066	TMEM69 (ENSCHYG00000026064) #14	IPP (ENSCHYG00000026048) #16	ENSCHYG00000026038	MAST2 (ENSCHYG00000025735) #17	PIK3R3 (ENSCHYG00000025628) #18	P3R3URF (ENSCHYG00000025545) #19	TSPAN1 (ENSCHYG00000025510) #20	POMGNT1 (ENSCHYG00000025315) #21	LURAP1 (ENSCHYG00000025283) #22	ENSCHYG00000025272	RAD54L (ENSCHYG00000025239) #23	LRRC41 (ENSCHYG00000025182) #24	ENSCHYG00000025148 #25	ENSCHYG00000025121 #26	FAAH (ENSCHYG00000025069) #30	ENSCHYG00000024986 #31	DMBX1 (ENSCHYG00000024937) #32	TMEM275 (ENSCHYG00000024933) #33	KNCN (ENSCHYG00000024910) #34	MKNK1 (ENSCHYG00000024738)	MOB3C (ENSCHYG00000024692)	TEX38 (ENSCHYG00000024663) #37	EFCAB14 (ENSCHYG00000024392)	CYP4B1 (ENSCHYG00000024314)
Camelidae	ANCESTRAL SPECIES	11	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000160927	ENSGT00940000155173
Arabian camel	MODERN SPECIES	4	TOE1 (ENSCDRG00005017889)	TESK2 (ENSCDRG00005017947)	ENSCDRG00005018057	MMACHC (ENSCDRG00005018089)	PRDX1 (ENSCDRG00005018122)	AKR1A1 (ENSCDRG00005018169) #7	NASP (ENSCDRG00005018257) #10	ENSCDRG00005018390 #11	TMEM69 (ENSCDRG00005018523) #14	IPP (ENSCDRG00005018549) #16	MAST2 (ENSCDRG00005018575) #17	PIK3R3 (ENSCDRG00005018616) #18	P3R3URF (ENSCDRG00005018655) #19	TSPAN1 (ENSCDRG00005018673) #20	POMGNT1 (ENSCDRG00005018694) #21	LURAP1 (ENSCDRG00005018783) #22	RAD54L (ENSCDRG00005018806) #23	LRRC41 (ENSCDRG00005018839) #24	ENSCDRG00005018916 #25	NSUN4 (ENSCDRG00005018950) #28	ENSCDRG00005018976 #26	FAAH (ENSCDRG00005019005) #30	DMBX1 (ENSCDRG00005019026) #32	KNCN (ENSCDRG00005019056) #34	MKNK1 (ENSCDRG00005019138)	MOB3C (ENSCDRG00005019211)	ATPAF1 (ENSCDRG00005019231) #36	TEX38 (ENSCDRG00005019244) #37	EFCAB14 (ENSCDRG00005019273)	CYP4X1 (ENSCDRG00005019322)	ENSCDRG00005019371
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Carnivora	ANCESTRAL SPECIES	1	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.a.a	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Caniformia	ANCESTRAL SPECIES	2	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Canidae	ANCESTRAL SPECIES	12	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318.i #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d	ENSGT00940000155173.m.f
Canis_lupus	ANCESTRAL SPECIES	16	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318.i #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d	ENSGT00940000155173.m.f
Dingo	MODERN SPECIES	344	ENSCAFG00020016713	ENSCAFG00020016710	MMACHC (ENSCAFG00020016708)	ENSCAFG00020016706	NASP (ENSCAFG00020016700) #10	CCDC17 (ENSCAFG00020016693) #11	GPBP1L1 (ENSCAFG00020016690) #12	ENSCAFG00020016687 #14	IPP (ENSCAFG00020016683) #16	ENSCAFG00020016680	MAST2 (ENSCAFG00020015300) #17	PIK3R3 (ENSCAFG00020015140) #18	P3R3URF (ENSCAFG00020015132) #19	TSPAN1 (ENSCAFG00020015118) #20	POMGNT1 (ENSCAFG00020015108) #21	LURAP1 (ENSCAFG00020015104) #22	RAD54L (ENSCAFG00020015066) #23	LRRC41 (ENSCAFG00020015053) #24	ENSCAFG00020015051 #25	NSUN4 (ENSCAFG00020015046) #28	FAAH (ENSCAFG00020015043) #30	ENSCAFG00020015029 #31	DMBX1 (ENSCAFG00020015020) #32	ENSCAFG00020015017	KNCN (ENSCAFG00020015014) #34	MKNK1 (ENSCAFG00020014775)	MOB3C (ENSCAFG00020014764)	ATPAF1 (ENSCAFG00020014753) #36	TEX38 (ENSCAFG00020014751) #37	ENSCAFG00020014750	ENSCAFG00020014748
Dog	MODERN SPECIES	6	TOE1 (ENSCAFG00845023071)	TESK2 (ENSCAFG00845022928)	ENSCAFG00845022838	ENSCAFG00845022783	PRDX1 (ENSCAFG00845022593)	AKR1A1 (ENSCAFG00845021858) #10	GPBP1L1 (ENSCAFG00845021504) #12	TMEM69 (ENSCAFG00845021465) #14	IPP (ENSCAFG00845021274) #16	LSM3 (ENSCAFG00845021214)	MAST2 (ENSCAFG00845020773) #17	PIK3R3 (ENSCAFG00845020552) #18	P3R3URF (ENSCAFG00845020496) #19	TSPAN1 (ENSCAFG00845020403) #20	POMGNT1 (ENSCAFG00845020251) #21	LURAP1 (ENSCAFG00845020213) #22	RAD54L (ENSCAFG00845020088) #23	LRRC41 (ENSCAFG00845019955) #24	UQCRH (ENSCAFG00845019885) #25	ENSCAFG00845019757 #26	FAAH (ENSCAFG00845019651) #30	ENSCAFG00845019414 #31	DMBX1 (ENSCAFG00845019339) #32	KNCN (ENSCAFG00845019249) #34	MKNK1 (ENSCAFG00845018913)	MOB3C (ENSCAFG00845018787)	ATPAF1 (ENSCAFG00845018669) #36	ENSCAFG00845018605 #37	EFCAB14 (ENSCAFG00845018333)	CYP4B1 (ENSCAFG00845018109)	CYP4A11 (ENSCAFG00845018002)
Red fox	MODERN SPECIES	9	CCDC163 (ENSVVUG00000007444)	MMACHC (ENSVVUG00000007436)	ENSVVUG00000007433	AKR1A1 (ENSVVUG00000007404) #7	NASP (ENSVVUG00000007384) #10	CCDC17 (ENSVVUG00000007358) #11	GPBP1L1 (ENSVVUG00000007354) #12	ENSVVUG00000007350 #14	IPP (ENSVVUG00000007334) #16	ENSVVUG00000007332	MAST2 (ENSVVUG00000007302) #17	PIK3R3 (ENSVVUG00000007266) #18	P3R3URF (ENSVVUG00000007257) #19	TSPAN1 (ENSVVUG00000007241) #20	POMGNT1 (ENSVVUG00000007212) #21	LURAP1 (ENSVVUG00000007210) #22	RAD54L (ENSVVUG00000007201) #23	LRRC41 (ENSVVUG00000007175) #24	ENSVVUG00000007144 #25	NSUN4 (ENSVVUG00000007141) #28	FAAH (ENSVVUG00000007135) #30	ENSVVUG00000007109 #31	DMBX1 (ENSVVUG00000007090) #32	KNCN (ENSVVUG00000007079) #34	MKNK1 (ENSVVUG00000007048)	MOB3C (ENSVVUG00000007033)	ATPAF1 (ENSVVUG00000007030) #36	TEX38 (ENSVVUG00000007029) #37	EFCAB14 (ENSVVUG00000007017)	CYP4B1 (ENSVVUG00000007000)	ENSVVUG00000006767
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Mustelinae	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
American mink	MODERN SPECIES	99	TESK2 (ENSNVIG00000018999)	ENSNVIG00000019042	MMAC (ENSNVIG00000019063)	ENSNVIG00000019088	AKR1A1 (ENSNVIG00000019123) #7	ENSNVIG00000019138 #10	CCDC17 (ENSNVIG00000019146) #11	GPBP1L1 (ENSNVIG00000019202) #12	TMEM69 (ENSNVIG00000019216) #14	IPP (ENSNVIG00000019242) #16	MAST2 (ENSNVIG00000019315) #17	P55G (ENSNVIG00000019400) #18	P3R3URF (ENSNVIG00000019511) #19	TSPAN1 (ENSNVIG00000019521) #20	POMGNT1 (ENSNVIG00000019563) #21	LURAP1 (ENSNVIG00000019596) #22	RAD54L (ENSNVIG00000019605) #23	LRRC41 (ENSNVIG00000019625) #24	ENSNVIG00000019652 #25	NSUN4 (ENSNVIG00000019674) #28	ENSNVIG00000019682 #26	FAAH (ENSNVIG00000019691) #30	ENSNVIG00000019711 #31	DMBX1 (ENSNVIG00000019739) #32	TMEM275 (ENSNVIG00000019754) #33	KNCN (ENSNVIG00000019761) #34	MKNK1 (ENSNVIG00000019797)	MOB3C (ENSNVIG00000019897)	ATPAF1 (ENSNVIG00000019919) #36	TEX38 (ENSNVIG00000019974) #37	EFCAB14 (ENSNVIG00000019987)
Ferret	MODERN SPECIES	167	MUTYH (ENSMPUG00000013130)	TOE1 (ENSMPUG00000013123)	TESK2 (ENSMPUG00000013083)	ENSMPUG00000013079	MMACHC (ENSMPUG00000013077)	AKR1A1 (ENSMPUG00000013072) #7	NASP (ENSMPUG00000013068) #10	CCDC17 (ENSMPUG00000013047) #11	GPBP1L1 (ENSMPUG00000013042) #12	TMEM69 (ENSMPUG00000013039) #14	IPP (ENSMPUG00000013032) #16	MAST2 (ENSMPUG00000013016) #17	PIK3R3 (ENSMPUG00000013004) #18	TSPAN1 (ENSMPUG00000012973) #20	POMGNT1 (ENSMPUG00000012963) #21	LURAP1 (ENSMPUG00000012960) #22	RAD54L (ENSMPUG00000012883) #23	LRRC41 (ENSMPUG00000012838) #24	ENSMPUG00000012823 #25	NSUN4 (ENSMPUG00000012789) #28	FAAH (ENSMPUG00000012783) #30	DMBX1 (ENSMPUG00000012779) #32	ENSMPUG00000012777	KNCN (ENSMPUG00000012774) #34	MKNK1 (ENSMPUG00000012773)	MOB3C (ENSMPUG00000012768)	ATPAF1 (ENSMPUG00000012737) #36	TEX38 (ENSMPUG00000018579) #37	EFCAB14 (ENSMPUG00000012730)	CYP4B1 (ENSMPUG00000012724)	ENSMPUG00000012694
Ursidae	ANCESTRAL SPECIES		ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.a.a	ENSGT00940000154277.a.b.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851.l #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d	ENSGT00940000155173.m
Ursus	ANCESTRAL SPECIES	19	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.a.a	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851.l #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d	ENSGT00940000155173.m
American black bear	MODERN SPECIES	3309																LURAP1 (ENSUAMG00000011834) #22	RAD54L (ENSUAMG00000011824) #23	LRRC41 (ENSUAMG00000011814) #24	ENSUAMG00000011812 #25
Polar bear	MODERN SPECIES	218	TESK2 (ENSUMAG00000024251)	ENSUMAG00000024248	MMACHC (ENSUMAG00000024246)	PRDX1 (ENSUMAG00000024245)	AKR1A1 (ENSUMAG00000024243) #7	ENSUMAG00000024241	NASP (ENSUMAG00000024238) #10	GPBP1L1 (ENSUMAG00000024234) #12	TMEM69 (ENSUMAG00000024232) #14	IPP (ENSUMAG00000024231) #16	MAST2 (ENSUMAG00000023982) #17	PIK3R3 (ENSUMAG00000023883) #18	P3R3URF (ENSUMAG00000023879) #19	TSPAN1 (ENSUMAG00000023878) #20	POMGNT1 (ENSUMAG00000023624) #21	LURAP1 (ENSUMAG00000023608) #22	RAD54L (ENSUMAG00000023603) #23	LRRC41 (ENSUMAG00000023590) #24	ENSUMAG00000023582 #25	NSUN4 (ENSUMAG00000023579) #28	FAAH (ENSUMAG00000023571) #30	ENSUMAG00000023566 #31	DMBX1 (ENSUMAG00000023564) #32	KNCN (ENSUMAG00000023562) #34	MKNK1 (ENSUMAG00000023560)	MOB3C (ENSUMAG00000023559)	ATPAF1 (ENSUMAG00000023558) #36	TEX38 (ENSUMAG00000023557) #37	EFCAB14 (ENSUMAG00000023556)	CYP4B1 (ENSUMAG00000023554)	ENSUMAG00000023368
Giant Panda	MODERN SPECIES	11	ENSAMEG00000013621	MMACHC (ENSAMEG00000013623)	ENSAMEG00000013632	AKR1A1 (ENSAMEG00000013643) #7	ENSAMEG00000026992	NASP (ENSAMEG00000013676) #10	CCDC17 (ENSAMEG00000013703) #11	GPBP1L1 (ENSAMEG00000013713) #12	TMEM69 (ENSAMEG00000025201) #14	IPP (ENSAMEG00000013728) #16	MAST2 (ENSAMEG00000013744) #17	PIK3R3 (ENSAMEG00000013794) #18	P3R3URF (ENSAMEG00000027311) #19	TSPAN1 (ENSAMEG00000013814) #20	POMGNT1 (ENSAMEG00000013829) #21	LURAP1 (ENSAMEG00000013898) #22	RAD54L (ENSAMEG00000013902) #23	LRRC41 (ENSAMEG00000027944) #24	ENSAMEG00000027666 #25	NSUN4 (ENSAMEG00000013949) #28	FAAH (ENSAMEG00000013963) #30	DMBX1 (ENSAMEG00000014000) #32	KNCN (ENSAMEG00000014006) #34	MKNK1 (ENSAMEG00000014008)	ENSAMEG00000014047 #36	ENSAMEG00000025041	TEX38 (ENSAMEG00000020215) #37	EFCAB14 (ENSAMEG00000014050)	CYP4B1 (ENSAMEG00000014075)	ENSAMEG00000029837	CYP4X1 (ENSAMEG00000000016)
Felidae	ANCESTRAL SPECIES	10	ENSGT00940000158765	ENSGT00940000165040	ENSGT00390000003464	ENSGT00940000154277.a.b.a.a	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00940000171199	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d
Panthera	ANCESTRAL SPECIES	4	ENSGT00940000158765	ENSGT00940000165040	ENSGT00390000003464	ENSGT00940000154277.a.b.a.a	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00940000171199	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00940000165040	ENSGT00390000003464	ENSGT00940000154277.a.b.a.a	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00940000171199	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00390000018741.n	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
leopard	MODERN SPECIES	16	AKR1A1 (ENSPPRG00000020376) #7	ENSPPRG00000016182	NASP (ENSPPRG00000000747) #10	ENSPPRG00000002231	GPBP1L1 (ENSPPRG00000003124) #12	ENSPPRG00000003282 #14	ENSPPRG00000016450 #14	IPP (ENSPPRG00000003586) #16	ENSPPRG00000016481	MAST2 (ENSPPRG00000006613) #17	ENSPPRG00000007434	PIK3R3 (ENSPPRG00000008668) #18	P3R3URF (ENSPPRG00000008928) #19	TSPAN1 (ENSPPRG00000009310) #20	POMGNT1 (ENSPPRG00000009717) #21	LURAP1 (ENSPPRG00000009878) #22	RAD54L (ENSPPRG00000010317) #23	LRRC41 (ENSPPRG00000011524) #24	ENSPPRG00000011891 #25	ENSPPRG00000012186 #26	NSUN4 (ENSPPRG00000012580) #28	ENSPPRG00000012899	FAAH (ENSPPRG00000013369) #30	DMBX1 (ENSPPRG00000014020) #32	TMEM275 (ENSPPRG00000016874) #33	KNCN (ENSPPRG00000016007) #34	MKNK1 (ENSPPRG00000019784)	MOB3C (ENSPPRG00000020894)	ATPAF1 (ENSPPRG00000024212) #36	TEX38 (ENSPPRG00000023945) #37	EFCAB14 (ENSPPRG00000023530)
lion	MODERN SPECIES	8	CCDC163 (ENSPLOG00000008862)	MMACHC (ENSPLOG00000008812)	PRDX1 (ENSPLOG00000008752)	AKR1A1 (ENSPLOG00000008675) #7	NASP (ENSPLOG00000008435) #10	GPBP1L1 (ENSPLOG00000008366) #12	TMEM69 (ENSPLOG00000008341) #14	IPP (ENSPLOG00000008281) #16	ENSPLOG00000008237	ENSPLOG00000008211	MAST2 (ENSPLOG00000008144) #17	PIK3R3 (ENSPLOG00000008001) #18	P3R3URF (ENSPLOG00000007966) #19	TSPAN1 (ENSPLOG00000007920) #20	POMGNT1 (ENSPLOG00000007888) #21	LURAP1 (ENSPLOG00000007864) #22	RAD54L (ENSPLOG00000007775) #23	LRRC41 (ENSPLOG00000007626) #24	ENSPLOG00000007588 #25	NSUN4 (ENSPLOG00000007546) #28	FAAH (ENSPLOG00000007532) #30	DMBX1 (ENSPLOG00000007507) #32	TMEM275 (ENSPLOG00000007493) #33	ENSPLOG00000007396 #35	MOB3C (ENSPLOG00000007361)	ATPAF1 (ENSPLOG00000007299) #36	TEX38 (ENSPLOG00000007261) #37	EFCAB14 (ENSPLOG00000007158)	ENSPLOG00000007122	ENSPLOG00000007060	ENSPLOG00000006991
Tiger	MODERN SPECIES	100	CCDC163 (ENSPTIG00000005813)	MMACHC (ENSPTIG00000005290)	PRDX1 (ENSPTIG00000002611)	AKR1A1 (ENSPTIG00000000876) #7	ENSPTIG00000005549	NASP (ENSPTIG00000020269) #10	ENSPTIG00000018539	GPBP1L1 (ENSPTIG00000018245) #12	TMEM69 (ENSPTIG00000017982) #14	IPP (ENSPTIG00000017467) #16	ENSPTIG00000016145 #17	PIK3R3 (ENSPTIG00000014803) #18	P3R3URF (ENSPTIG00000013968) #19	TSPAN1 (ENSPTIG00000013418) #20	POMGNT1 (ENSPTIG00000012849) #21	LURAP1 (ENSPTIG00000012565) #22	RAD54L (ENSPTIG00000012200) #23	LRRC41 (ENSPTIG00000009838) #24	ENSPTIG00000009640 #25	ENSPTIG00000008891 #26	NSUN4 (ENSPTIG00000007969) #28	FAAH (ENSPTIG00000006853) #30	DMBX1 (ENSPTIG00000006229) #32	KNCN (ENSPTIG00000005487) #34	MKNK1 (ENSPTIG00000004539)	MOB3C (ENSPTIG00000002465)	ATPAF1 (ENSPTIG00000022016) #36	TEX38 (ENSPTIG00000021969) #37	EFCAB14 (ENSPTIG00000021900)	CYP4B1 (ENSPTIG00000021254)	ENSPTIG00000020880
Cat	MODERN SPECIES	239	NASP (ENSFCAG00000002859) #10	ENSFCAG00000025116	ENSFCAG00000032722 #9	GPBP1L1 (ENSFCAG00000002864) #12	TMEM69 (ENSFCAG00000030817) #14	IPP (ENSFCAG00000015234) #16	ENSFCAG00000039462	MAST2 (ENSFCAG00000014264) #17	ENSFCAG00000049057	ENSFCAG00000036603	PIK3R3 (ENSFCAG00000024092) #18	ENSFCAG00000045752	P3R3URF (ENSFCAG00000032526) #19	TSPAN1 (ENSFCAG00000000553) #20	POMGNT1 (ENSFCAG00000000554) #21	LURAP1 (ENSFCAG00000036628) #22	RAD54L (ENSFCAG00000003444) #23	LRRC41 (ENSFCAG00000003450) #24	ENSFCAG00000041368 #25	NSUN4 (ENSFCAG00000042262) #28	FAAH (ENSFCAG00000003454) #30	DMBX1 (ENSFCAG00000011876) #32	TMEM275 (ENSFCAG00000045074) #33	KNCN (ENSFCAG00000040114) #34	MKNK1 (ENSFCAG00000007999)	MOB3C (ENSFCAG00000008001)	ATPAF1 (ENSFCAG00000024832) #36	TEX38 (ENSFCAG00000004534) #37	EFCAB14 (ENSFCAG00000004536)	CYP4B1 (ENSFCAG00000002762)	ENSFCAG00000038068
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d
Equus	ANCESTRAL SPECIES	2	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00500000045816 #26	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.c.b.b	ENSGT00940000161441.c.a.b
Donkey	MODERN SPECIES	25	TESK2 (ENSEASG00005004214)	CCDC163 (ENSEASG00005004223)	MMACHC (ENSEASG00005004227)	ENSEASG00005004235	AKR1A1 (ENSEASG00005004248) #7	NASP (ENSEASG00005004258) #10	GPBP1L1 (ENSEASG00005004281) #12	IPP (ENSEASG00005004318) #16	TMEM69 (ENSEASG00005036141) #14	MAST2 (ENSEASG00005004337) #17	ENSEASG00005024119	PIK3R3 (ENSEASG00005004376) #18	TSPAN1 (ENSEASG00005004390) #20	P3R3URF (ENSEASG00005004383) #19	POMGNT1 (ENSEASG00005004411) #21	LURAP1 (ENSEASG00005027969) #22	RAD54L (ENSEASG00005004511) #23	LRRC41 (ENSEASG00005004872) #24	ENSEASG00005034960 #25	ENSEASG00005033996 #26	FAAH (ENSEASG00005004885) #30	DMBX1 (ENSEASG00005004889) #32	TMEM275 (ENSEASG00005004891) #33	KNCN (ENSEASG00005035535) #34	MKNK1 (ENSEASG00005004902)	MOB3C (ENSEASG00005004909)	ATPAF1 (ENSEASG00005004914) #36	TEX38 (ENSEASG00005030988) #37	EFCAB14 (ENSEASG00005004930)	ENSEASG00005031595	ENSEASG00005010120
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d	ENSGT00940000155173
Megabat	MODERN SPECIES	4960																LURAP1 (ENSPVAG00000011836) #22
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441.d	ENSGT00940000155173
Greater horseshoe bat	MODERN SPECIES	27	TESK2 (ENSRFEG00010012498)	ENSRFEG00010012564	MMACHC (ENSRFEG00010012656)	PRDX1 (ENSRFEG00010012693)	AKR1A1 (ENSRFEG00010012781) #7	ENSRFEG00010012845 #10	ENSRFEG00010012891	GPBP1L1 (ENSRFEG00010012956) #12	TMEM69 (ENSRFEG00010000234) #14	IPP (ENSRFEG00010000265) #16	MAST2 (ENSRFEG00010000493) #17	PIK3R3 (ENSRFEG00010000731) #18	P3R3URF (ENSRFEG00010000758) #19	TSPAN1 (ENSRFEG00010000774) #20	POMGNT1 (ENSRFEG00010000815) #21	LURAP1 (ENSRFEG00010000887) #22	RAD54L (ENSRFEG00010000909) #23	LRRC41 (ENSRFEG00010000955) #24	ENSRFEG00010000998 #25	NSUN4 (ENSRFEG00010001014) #28	FAAH (ENSRFEG00010001067) #30	DMBX1 (ENSRFEG00010001145) #32	KNCN (ENSRFEG00010001190) #34	MKNK1 (ENSRFEG00010001258)	MOB3C (ENSRFEG00010001306)	ATPAF1 (ENSRFEG00010001372) #36	TEX38 (ENSRFEG00010001488) #37	EFCAB14 (ENSRFEG00010001530)	CYP4B1 (ENSRFEG00010001687)	ENSRFEG00010001800	CYP4X1 (ENSRFEG00010001881)
Atlantogenata	ANCESTRAL SPECIES	11	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161441	ENSGT00940000155173	ENSGT00940000160927
Xenarthra	ANCESTRAL SPECIES	188											ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00700000106049 #19	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Armadillo	MODERN SPECIES	1971											MAST2 (ENSDNOG00000046014) #17	PIK3R3 (ENSDNOG00000039321) #18	P3R3URF (ENSDNOG00000033172) #19	TSPAN1 (ENSDNOG00000049228) #20	POMGNT1 (ENSDNOG00000003993) #21	LURAP1 (ENSDNOG00000004005) #22	RAD54L (ENSDNOG00000003395) #23	LRRC41 (ENSDNOG00000003407) #24	ENSDNOG00000013554 #25	NSUN4 (ENSDNOG00000003416) #28	FAAH (ENSDNOG00000014693) #30	DMBX1 (ENSDNOG00000035821) #32	KNCN (ENSDNOG00000034069) #34	MKNK1 (ENSDNOG00000039937)	MOB3C (ENSDNOG00000037923)	ATPAF1 (ENSDNOG00000010461) #36	TEX38 (ENSDNOG00000034660) #37	EFCAB14 (ENSDNOG00000046704)
Afrotheria	ANCESTRAL SPECIES	42	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31
Afrotheria_a	ANCESTRAL SPECIES	42	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31
Elephant	MODERN SPECIES	332	TOE1 (ENSLAFG00000017370)	TESK2 (ENSLAFG00000017377)	ENSLAFG00000028857	MMACHC (ENSLAFG00000017386)	PRDX1 (ENSLAFG00000017390)	AKR1A1 (ENSLAFG00000000643) #7	NASP (ENSLAFG00000008715) #10	CCDC17 (ENSLAFG00000008721) #11	ENSLAFG00000008723 #12	TMEM69 (ENSLAFG00000008731) #14	IPP (ENSLAFG00000008733) #16	MAST2 (ENSLAFG00000015248) #17	PIK3R3 (ENSLAFG00000003690) #18	TSPAN1 (ENSLAFG00000003695) #20	POMGNT1 (ENSLAFG00000004478) #21	LURAP1 (ENSLAFG00000003696) #22	RAD54L (ENSLAFG00000007583) #23	LRRC41 (ENSLAFG00000007586) #24	ENSLAFG00000007590 #25	NSUN4 (ENSLAFG00000012403) #28	FAAH (ENSLAFG00000000906) #30	ENSLAFG00000028034 #31
Tenrec	MODERN SPECIES	6466																LURAP1 (ENSETEG00000007672) #22
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000162886	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196
Opossum	MODERN SPECIES	1	TOE1 (ENSMODG00000002430)	TESK2 (ENSMODG00000002412)	ENSMODG00000002397	MMACHC (ENSMODG00000002391)	PRDX1 (ENSMODG00000002382)	AKR1A1 (ENSMODG00000002355) #7	ENSMODG00000002288 #10	ENSMODG00000002257 #11	GPBP1L1 (ENSMODG00000002239) #12	TMEM69 (ENSMODG00000043204) #14	IPP (ENSMODG00000002208) #16	ENSMODG00000002145 ##17	ENSMODG00000002139 #18	TSPAN1 (ENSMODG00000002113) #20	POMGNT1 (ENSMODG00000002106) #21	LURAP1 (ENSMODG00000049641) #22	ENSMODG00000002032 #23	LRRC41 (ENSMODG00000002018) #24	ENSMODG00000001998	NSUN4 (ENSMODG00000001996) #28	FAAH (ENSMODG00000001986) #30	ENSMODG00000029161 #31	DMBX1 (ENSMODG00000001963) #32	TMEM275 (ENSMODG00000025359) #33	KNCN (ENSMODG00000041143) #34	MKNK1 (ENSMODG00000001951)	MOB3C (ENSMODG00000048219)	ATPAF1 (ENSMODG00000001918) #36	EFCAB14 (ENSMODG00000001906)	ENSMODG00000001890	ENSMODG00000045742
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316 #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000155173.w.b
Diprotodontia	ANCESTRAL SPECIES	50	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000155173.w.b	ENSGT00940000155173.w.a
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT00940000163965	ENSGT00390000003464	ENSGT00940000154277.a.b.c	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00390000006459 #11	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00960000189628	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00400000024146 #34	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000155173.w.b
Common wonbat	MODERN SPECIES	1060	TOE1 (ENSVURG00010017037)	TESK2 (ENSVURG00010017047)	ENSVURG00010017056	MMACHC (ENSVURG00010017070)	ENSVURG00010017078	AKR1A1 (ENSVURG00010017095) #7	NASP (ENSVURG00010017140) #10	ENSVURG00010017185	GPBP1L1 (ENSVURG00010017198) #12	TMEM69 (ENSVURG00010017213) #14	IPP (ENSVURG00010017219) #16	MAST2 (ENSVURG00010017233) #17	PIK3R3 (ENSVURG00010017279) #18	TSPAN1 (ENSVURG00010017292) #20	POMGNT1 (ENSVURG00010017297) #21	LURAP1 (ENSVURG00010017357) #22	RAD54L (ENSVURG00010017319) #23	LRRC41 (ENSVURG00010017363) #24	ENSVURG00010017376 #25	NSUN4 (ENSVURG00010017387) #28	FAAH (ENSVURG00010017402) #30	DMBX1 (ENSVURG00010017415) #32	KNCN (ENSVURG00010017426) #34	ENSVURG00010017435 #35	MOB3C (ENSVURG00010017461)	ENSVURG00010017465	ATPAF1 (ENSVURG00010017468) #36	EFCAB14 (ENSVURG00010017484)	ENSVURG00010017500	ENSVURG00010017522	ENSVURG00010017535
Wallaby	MODERN SPECIES	8002														TSPAN1 (ENSMEUG00000011919) #20	POMGNT1 (ENSMEUG00000011931) #21	LURAP1 (ENSMEUG00000011966) #22
Tasmanian devil	MODERN SPECIES	3	TESK2 (ENSSHAG00000026858)	ENSSHAG00000007432	MMACHC (ENSSHAG00000024667)	ENSSHAG00000024473	AKR1A1 (ENSSHAG00000008420) #7	ENSSHAG00000008065 #10	TMEM69 (ENSSHAG00000007098) #14	GPBP1L1 (ENSSHAG00000025227) #12	IPP (ENSSHAG00000025029) #16	MAST2 (ENSSHAG00000004259) #17	PIK3R3 (ENSSHAG00000025732) #18	TSPAN1 (ENSSHAG00000027698) #20	POMGNT1 (ENSSHAG00000002657) #21	RAD54L (ENSSHAG00000000110) #23	LRRC41 (ENSSHAG00000001887) #24	ENSSHAG00000031240 #22	NSUN4 (ENSSHAG00000002565) #28	FAAH (ENSSHAG00000007780) #30	ENSSHAG00000006770 #31	DMBX1 (ENSSHAG00000025794) #32	TMEM275 (ENSSHAG00000031634) #33	KNCN (ENSSHAG00000016695) #34	ENSSHAG00000004306 #35	MOB3C (ENSSHAG00000025198)	ATPAF1 (ENSSHAG00000032278) #36	TEX38 (ENSSHAG00000002666) #37	EFCAB14 (ENSSHAG00000022941)	ENSSHAG00000000201	ENSSHAG00000029874	ENSSHAG00000024463	ENSSHAG00000031091
Platypus	MODERN SPECIES	9	ELAVL4 (ENSOANG00000036778)	BEND5 (ENSOANG00000009132)	ENSOANG00000041444	SLC5A9 (ENSOANG00000004257)	TRABD2B (ENSOANG00000037757)	ENSOANG00000030729	ENSOANG00000043767	ENSOANG00000015215	ENSOANG00000002942	TAL1 (ENSOANG00000032005)	PDZK1IP1 (ENSOANG00000042171)	ENSOANG00000002639	ENSOANG00000002637	ENSOANG00000014732	POMGNT1 (ENSOANG00000039832) #21	LURAP1 (ENSOANG00000044785) #22	RAD54L (ENSOANG00000039799) #23	LRRC41 (ENSOANG00000044307) #24	ENSOANG00000043609 #25	FAAH (ENSOANG00000039661) #30	DMBX1 (ENSOANG00000040550) #32	ENSOANG00000036851 #35	MOB3C (ENSOANG00000047366)	ATPAF1 (ENSOANG00000007256) #36	ENSOANG00000049254 #37	EFCAB14 (ENSOANG00000047490)	CYP4B1 (ENSOANG00000012347)	ENSOANG00000036059 #20	ENSOANG00000036921 #20	PIK3R3 (ENSOANG00000005917) #18	MAST2 (ENSOANG00000011786) #17
Sauria	ANCESTRAL SPECIES	7	ENSGT01030000235254	ENSGT00740000116213	ENSGT00390000003464	ENSGT00390000018130.b	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00940000167241	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316.a.a #31	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161527.c
Lepidosauria	ANCESTRAL SPECIES	11			ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000161361	ENSGT00940000160152	ENSGT00940000161195	ENSGT00940000155828	ENSGT00390000010768	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316.a.a #31	ENSGT00940000163316.a.b #31	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c
Episquamata	ANCESTRAL SPECIES	1	ENSGT00510000047486	ENSGT00940000162133	ENSGT00940000162474	ENSGT00940000159121	ENSGT00940000164586	ENSGT00940000160852	ENSGT00390000012433.b	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316.a.a #31	ENSGT00940000163316.a.b #31	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00960000192856	ENSGT00390000011196
Laterata	ANCESTRAL SPECIES	3	ENSGT00510000047486	ENSGT00940000162133	ENSGT00940000162474	ENSGT00940000159121	ENSGT00940000164586	ENSGT00940000160852	ENSGT00390000012433.b	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316.a.a #31	ENSGT00940000163316.a.b #31	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00960000192856	ENSGT00390000011196
Common wall lizard	MODERN SPECIES	14	BTBD19 (ENSPMRG00000009707)	DYNLT4 (ENSPMRG00000009700)	PLK3 (ENSPMRG00000009686)	ENSPMRG00000009673	BEST4 (ENSPMRG00000009667)	RPS8 (ENSPMRG00000009647)	GPBP1L1 (ENSPMRG00000009638) #12	TMEM69 (ENSPMRG00000009634) #14	IPP (ENSPMRG00000009620) #16	ENSPMRG00000009610	ENSPMRG00000009604	MAST2 (ENSPMRG00000008824) #17	PIK3R3 (ENSPMRG00000008673) #18	TSPAN1 (ENSPMRG00000008655) #20	POMGNT1 (ENSPMRG00000008531) #21	LURAP1 (ENSPMRG00000008487) #22	RAD54L (ENSPMRG00000008267) #23	LRRC41 (ENSPMRG00000008224) #24	ENSPMRG00000008218 #25	NSUN4 (ENSPMRG00000008211) #28	FAAH (ENSPMRG00000008196) #30	ENSPMRG00000008178 #31	ENSPMRG00000008164 #31	ENSPMRG00000008154 #31	DMBX1 (ENSPMRG00000008152) #32	ENSPMRG00000008146	ENSPMRG00000008131 #35	MOB3C (ENSPMRG00000008123)	ATPAF1 (ENSPMRG00000008083) #36	ENSPMRG00000008077	EFCAB14 (ENSPMRG00000008063)
Argentine black and white tegu	MODERN SPECIES	16	EIF2B3 (ENSSMRG00000018368)	BTBD19 (ENSSMRG00000018366)	DYNLT4 (ENSSMRG00000018365)	PLK3 (ENSSMRG00000018364)	ENSSMRG00000018363	BEST4 (ENSSMRG00000018358)	RPS8 (ENSSMRG00000018357)	GPBP1L1 (ENSSMRG00000018356) #12	TMEM69 (ENSSMRG00000018355) #14	IPP (ENSSMRG00000018354) #16	ENSSMRG00000018353	MAST2 (ENSSMRG00000018352) #17	PIK3R3 (ENSSMRG00000018350) #18	TSPAN1 (ENSSMRG00000018348) #20	POMGNT1 (ENSSMRG00000018347) #21	LURAP1 (ENSSMRG00000018346) #22	RAD54L (ENSSMRG00000018344) #23	LRRC41 (ENSSMRG00000018343) #24	ENSSMRG00000018342 #25	NSUN4 (ENSSMRG00000018341) #28	ENSSMRG00000018340 #31	ENSSMRG00000018339 #31	DMBX1 (ENSSMRG00000018338) #32	TMEM275 (ENSSMRG00000018337) #33	ENSSMRG00000018336 #35	MOB3C (ENSSMRG00000018334)	ATPAF1 (ENSSMRG00000018333) #36	EFCAB14 (ENSSMRG00000018332)	ENSSMRG00000018331	ENSSMRG00000018315	ENSSMRG00000018313
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00510000047486	ENSGT00940000162133	ENSGT00940000162474	ENSGT00940000159121	ENSGT00940000164586	ENSGT00940000160852	ENSGT00390000012433.b	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316.a.a #31	ENSGT00940000163316.a.b #31	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00960000192856	ENSGT00390000011196
Elapidae	ANCESTRAL SPECIES	1	ENSGT00510000047486	ENSGT00940000162133	ENSGT00940000162474	ENSGT00940000159121	ENSGT00940000164586	ENSGT00940000160852	ENSGT00390000012433.b	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316.a.a #31	ENSGT00940000163316.a.b #31	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00960000192856	ENSGT00390000011196
Elapidae_a	ANCESTRAL SPECIES	7	ENSGT00510000047486	ENSGT00940000162133	ENSGT00940000162474	ENSGT00940000159121	ENSGT00940000164586	ENSGT00940000160852	ENSGT00390000012433.b	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316.a.a #31	ENSGT00940000163316.a.b #31	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00960000192856	ENSGT00390000011196
Acanthophiinae	ANCESTRAL SPECIES	5	ENSGT00510000047486	ENSGT00940000162133	ENSGT00940000162474	ENSGT00940000159121	ENSGT00940000164586	ENSGT00940000160852	ENSGT00390000012433.b	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316.a.a #31	ENSGT00940000163316.a.b #31	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00960000192856	ENSGT00390000011196
Eastern brown snake	MODERN SPECIES	34	UROD (ENSPTXG00000001643)	HECTD3 (ENSPTXG00000001646)	PTCH2 (ENSPTXG00000001650)	EIF2B3 (ENSPTXG00000001651)	PLK3 (ENSPTXG00000001652)	ENSPTXG00000001653	RPS8 (ENSPTXG00000001654)	ENSPTXG00000001659 #12	TMEM69 (ENSPTXG00000001660) #14	IPP (ENSPTXG00000001661) #16	ENSPTXG00000001662	MAST2 (ENSPTXG00000001758) #17	PIK3R3 (ENSPTXG00000007104) #18	TSPAN1 (ENSPTXG00000007105) #20	POMGNT1 (ENSPTXG00000007106) #21	LURAP1 (ENSPTXG00000007107) #22	RAD54L (ENSPTXG00000007109) #23	LRRC41 (ENSPTXG00000007114) #24	ENSPTXG00000007120 #25	NSUN4 (ENSPTXG00000007122) #28	FAAH (ENSPTXG00000007124) #30	ENSPTXG00000007125 #31	ENSPTXG00000001479 #31	ENSPTXG00000001485 #31	DMBX1 (ENSPTXG00000001497) #32	ENSPTXG00000001502 #35	MOB3C (ENSPTXG00000001507)	ATPAF1 (ENSPTXG00000001511) #36	ENSPTXG00000001516	EFCAB14 (ENSPTXG00000001523)	ENSPTXG00000001527
Mainland tiger snake	MODERN SPECIES	13	EIF2B3 (ENSNSUG00000015781)	BTBD19 (ENSNSUG00000015802)	DYNLT4 (ENSNSUG00000015803)	PLK3 (ENSNSUG00000015804)	ENSNSUG00000015805	BEST4 (ENSNSUG00000015806)	RPS8 (ENSNSUG00000015807)	GPBP1L1 (ENSNSUG00000015810) #12	TMEM69 (ENSNSUG00000015811) #14	IPP (ENSNSUG00000015812) #16	ENSNSUG00000015813	MAST2 (ENSNSUG00000015815) #17	PIK3R3 (ENSNSUG00000016086) #18	TSPAN1 (ENSNSUG00000016088) #20	POMGNT1 (ENSNSUG00000016096) #21	LURAP1 (ENSNSUG00000016145) #22	RAD54L (ENSNSUG00000016147) #23	LRRC41 (ENSNSUG00000016149) #24	ENSNSUG00000016158 #25	NSUN4 (ENSNSUG00000016159) #28	FAAH (ENSNSUG00000016160) #30	ENSNSUG00000016161 #31	ENSNSUG00000016162 #31	ENSNSUG00000016163 #31	DMBX1 (ENSNSUG00000016164) #32	TMEM275 (ENSNSUG00000016165) #33	ENSNSUG00000016166 #35	ENSNSUG00000016167 #35	MOB3C (ENSNSUG00000016168)	ATPAF1 (ENSNSUG00000016169) #36	ENSNSUG00000016170
Blue-lipped sea krait	MODERN SPECIES	558																ENSLLTG00000005479 #22
Indian cobra	MODERN SPECIES	2	EIF2B3 (ENSNNAG00000005050)	BTBD19 (ENSNNAG00000005100)	DYNLT4 (ENSNNAG00000005122)	PLK3 (ENSNNAG00000005132)	ENSNNAG00000005162	BEST4 (ENSNNAG00000005176)	ENSNNAG00000005212	GPBP1L1 (ENSNNAG00000005252) #12	TMEM69 (ENSNNAG00000005287) #14	IPP (ENSNNAG00000005300) #16	ENSNNAG00000005323	MAST2 (ENSNNAG00000005562) #17	PIK3R3 (ENSNNAG00000008262) #18	TSPAN1 (ENSNNAG00000008310) #20	POMGNT1 (ENSNNAG00000008355) #21	LURAP1 (ENSNNAG00000008492) #22	RAD54L (ENSNNAG00000008522) #23	LRRC41 (ENSNNAG00000008886) #24	ENSNNAG00000008904 #25	NSUN4 (ENSNNAG00000008917) #28	FAAH (ENSNNAG00000008955) #30	ENSNNAG00000009411 #31	ENSNNAG00000009445 #31	ENSNNAG00000009543 #31	DMBX1 (ENSNNAG00000009640) #32	ENSNNAG00000009684 #35	MOB3C (ENSNNAG00000009741)	ATPAF1 (ENSNNAG00000009764) #36	ENSNNAG00000009790	EFCAB14 (ENSNNAG00000009832)	ENSNNAG00000009903
Lizard	MODERN SPECIES	3	BEST4 (ENSACAG00000015654)	ENSACAG00000015697	GPBP1L1 (ENSACAG00000015710) #12	TMEM69 (ENSACAG00000015732) #14	IPP (ENSACAG00000015733) #16	ENSACAG00000034632	ENSACAG00000015757	MAST2 (ENSACAG00000015765) #17	ENSACAG00000040097	ENSACAG00000038001	PIK3R3 (ENSACAG00000015856) #18	ENSACAG00000028366	TSPAN1 (ENSACAG00000029493) #20	POMGNT1 (ENSACAG00000002424) #21	ENSACAG00000002593	LURAP1 (ENSACAG00000002422) #22	RAD54L (ENSACAG00000002312) #23	LRRC41 (ENSACAG00000002210) #24	ENSACAG00000002194 #25	NSUN4 (ENSACAG00000043184) #28	FAAH (ENSACAG00000002040) #30	ENSACAG00000001984 #31	ENSACAG00000028412 #31	ENSACAG00000029353 #31	ENSACAG00000001951 #32	ENSACAG00000001932	ENSACAG00000001870 #35	ENSACAG00000034956	ENSACAG00000001833	ENSACAG00000034569	ENSACAG00000041940
tuatara	MODERN SPECIES	1725										IPP (ENSSPUG00000007872) #16	ENSSPUG00000007957	MAST2 (ENSSPUG00000008056) #17	PIK3R3 (ENSSPUG00000008274) #18	TSPAN1 (ENSSPUG00000008283) #20	POMGNT1 (ENSSPUG00000008304) #21	LURAP1 (ENSSPUG00000008406) #22	RAD54L (ENSSPUG00000008501) #23	LRRC41 (ENSSPUG00000008537) #24	ENSSPUG00000008549	NSUN4 (ENSSPUG00000008598) #28	FAAH (ENSSPUG00000008773) #30	ENSSPUG00000008796 #31	ENSSPUG00000008848 #31	ENSSPUG00000008867 #31	DMBX1 (ENSSPUG00000008894) #32	ENSSPUG00000008905 #35	MOB3C (ENSSPUG00000008916)	ATPAF1 (ENSSPUG00000009006) #36	EFCAB14 (ENSSPUG00000009350)	CYP4B1 (ENSSPUG00000009405)	CYP4B35 (ENSSPUG00000009557)
Archelosauria	ANCESTRAL SPECIES	9	ENSGT01030000235254	ENSGT00740000116213	ENSGT00390000003464	ENSGT00390000018130.b	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00940000167241	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161527.c.e
Cryptodira	ANCESTRAL SPECIES	8												ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161527.c.e
Testudinoidea	ANCESTRAL SPECIES	5												ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161527.c.e
Emydidae	ANCESTRAL SPECIES	22	ENSGT00390000003464	ENSGT00390000018130.b	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00940000167241	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316.a.a #31	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161527.c.e
painted turtle	MODERN SPECIES	17	ENSCPBG00000005415	MMACHC (ENSCPBG00000005421)	ENSCPBG00000005423	PRDX1 (ENSCPBG00000005425)	AKR1A1 (ENSCPBG00000005428) #7	NASP (ENSCPBG00000005434) #10	ENSCPBG00000005462	GPBP1L1 (ENSCPBG00000005483) #12	TMEM69 (ENSCPBG00000005495) #14	IPP (ENSCPBG00000005502) #16	ENSCPBG00000005508	MAST2 (ENSCPBG00000005533) #17	PIK3R3 (ENSCPBG00000005617) #18	TSPAN1 (ENSCPBG00000005640) #20	POMGNT1 (ENSCPBG00000005648) #21	LURAP1 (ENSCPBG00000005664) #22	RAD54L (ENSCPBG00000005675) #23	LRRC41 (ENSCPBG00000005687) #24	IRS2 (ENSCPBG00000005697)	ENSCPBG00000005733	COL4A2 (ENSCPBG00000005855)	RAB20 (ENSCPBG00000005866)	NAXD (ENSCPBG00000005870)	CARS2 (ENSCPBG00000005880)	ING1 (ENSCPBG00000005890)	ENSCPBG00000005892	ANKRD10 (ENSCPBG00000005903)
Three-toed box turtle	MODERN SPECIES	47	TESK2 (ENSTMTG00000001336)	MMACHC (ENSTMTG00000001321)	ENSTMTG00000001298	PRDX1 (ENSTMTG00000001284)	AKR1A1 (ENSTMTG00000001274) #7	NASP (ENSTMTG00000001252) #10	ENSTMTG00000001232	GPBP1L1 (ENSTMTG00000001221) #12	TMEM69 (ENSTMTG00000001208) #14	IPP (ENSTMTG00000001195) #16	ENSTMTG00000001174	MAST2 (ENSTMTG00000000486) #17	PIK3R3 (ENSTMTG00000000080) #18	TSPAN1 (ENSTMTG00000011697) #20	POMGNT1 (ENSTMTG00000011662) #21	LURAP1 (ENSTMTG00000011643) #22	ENSTMTG00000011632	RAD54L (ENSTMTG00000011057) #23	LRRC41 (ENSTMTG00000010766) #24	NSUN4 (ENSTMTG00000010730) #28	ENSTMTG00000010712	ENSTMTG00000010676 #31	ENSTMTG00000010541 #30	ENSTMTG00000010486 #31	DMBX1 (ENSTMTG00000010467) #32	ENSTMTG00000010437 #35	MOB3C (ENSTMTG00000010428)	ATPAF1 (ENSTMTG00000010398) #36	EFCAB14 (ENSTMTG00000010371)	ENSTMTG00000009718	ENSTMTG00000009631
Testudinidae	ANCESTRAL SPECIES	33	ENSGT00390000018130.b	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00940000167241	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00950000185760	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000163316.b #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000016446 #37	ENSGT00390000011196	ENSGT00940000161527.c.e
Abingdon island giant tortoise	MODERN SPECIES	2304											MAST2 (ENSCABG00000011920) #17	PIK3R3 (ENSCABG00000011830) #18	ENSCABG00000011829	TSPAN1 (ENSCABG00000011827) #20	POMGNT1 (ENSCABG00000011271) #21	LURAP1 (ENSCABG00000011246) #22	RAD54L (ENSCABG00000011204) #23	LRRC41 (ENSCABG00000011153) #24	ENSCABG00000011149 #25	NSUN4 (ENSCABG00000011147) #28	ENSCABG00000011145 #31	ENSCABG00000011142 #30	ENSCABG00000011138 #31	DMBX1 (ENSCABG00000011137) #32	TMEM275 (ENSCABG00000011136) #33	ENSCABG00000011135 #35	MOB3C (ENSCABG00000011134)	ATPAF1 (ENSCABG00000011133) #36	TEX38 (ENSCABG00000011132) #37	EFCAB14 (ENSCABG00000011128)	ENSCABG00000010908
Goode s thornscrub tortoise	MODERN SPECIES	22	MMACHC (ENSGEVG00005008601)	ENSGEVG00005008538	PRDX1 (ENSGEVG00005020539)	AKR1A1 (ENSGEVG00005020534) #7	NASP (ENSGEVG00005020524) #10	ENSGEVG00005020516	GPBP1L1 (ENSGEVG00005020508) #12	TMEM69 (ENSGEVG00005020507) #14	IPP (ENSGEVG00005020503) #16	ENSGEVG00005020502	MAST2 (ENSGEVG00005020025) #17	PIK3R3 (ENSGEVG00005019739) #18	ENSGEVG00005019734	TSPAN1 (ENSGEVG00005019729) #20	POMGNT1 (ENSGEVG00005019721) #21	LURAP1 (ENSGEVG00005019716) #22	RAD54L (ENSGEVG00005019699) #23	LRRC41 (ENSGEVG00005019676) #24	ENSGEVG00005019659 #25	NSUN4 (ENSGEVG00005019648) #28	ENSGEVG00005019637 #31	FAAH (ENSGEVG00005019620) #30	ENSGEVG00005019602 #31	DMBX1 (ENSGEVG00005019588) #32	ENSGEVG00005019576 #35	MOB3C (ENSGEVG00005019561)	ATPAF1 (ENSGEVG00005019541) #36	TEX38 (ENSGEVG00005019533) #37	EFCAB14 (ENSGEVG00005019524)	ENSGEVG00005019451	ENSGEVG00005019318
Archosauria	ANCESTRAL SPECIES	11	ENSGT00940000158765	ENSGT01030000235254	ENSGT00740000116213	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Aves	ANCESTRAL SPECIES	7	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Neognathae	ANCESTRAL SPECIES	8	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Galloanserae	ANCESTRAL SPECIES	8	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Anatidae	ANCESTRAL SPECIES	5	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Pink-footed goose	MODERN SPECIES	1	TESK2 (ENSABRG00000017040)	ENSABRG00000017035	MMACHC (ENSABRG00000017026)	PRDX1 (ENSABRG00000017021)	AKR1A1 (ENSABRG00000017018) #7	NASP (ENSABRG00000017014) #10	GPBP1L1 (ENSABRG00000017008) #12	TMEM69 (ENSABRG00000017007) #14	IPP (ENSABRG00000017006) #16	ENSABRG00000017000	MAST2 (ENSABRG00000016971) #17	PIK3R3 (ENSABRG00000016952) #18	ENSABRG00000016940 ##18	TSPAN1 (ENSABRG00000016928) #20	POMGNT1 (ENSABRG00000016911) #21	LURAP1 (ENSABRG00000016908) #22	RAD54L (ENSABRG00000016858) #23	LRRC41 (ENSABRG00000016846) #24	ENSABRG00000016838 #25	NSUN4 (ENSABRG00000016836) #28	ENSABRG00000016829 #31	ENSABRG00000016808 #31	ENSABRG00000016807	DMBX1 (ENSABRG00000016803) #32	TMEM275 (ENSABRG00000016800) #33	ENSABRG00000016779 #35	MOB3C (ENSABRG00000016771)	ATPAF1 (ENSABRG00000016766) #36	EFCAB14 (ENSABRG00000016757)	ENSABRG00000016721	ENSABRG00000016720
Duck	MODERN SPECIES	26	TOE1 (ENSAPLG00000007214)	TESK2 (ENSAPLG00000007216)	ENSAPLG00000007235	MMACHC (ENSAPLG00000007238)	PRDX1 (ENSAPLG00000007243)	AKR1A1 (ENSAPLG00000007260) #7	NASP (ENSAPLG00000004941) #10	GPBP1L1 (ENSAPLG00000005350) #12	TMEM69 (ENSAPLG00000005652) #14	IPP (ENSAPLG00000005658) #16	ENSAPLG00000006104	MAST2 (ENSAPLG00000006200) #17	PIK3R3 (ENSAPLG00000006823) #18	TSPAN1 (ENSAPLG00000007619) #20	POMGNT1 (ENSAPLG00000007878) #21	LURAP1 (ENSAPLG00000030348) #22	RAD54L (ENSAPLG00000006389) #23	LRRC41 (ENSAPLG00000006638) #24	ENSAPLG00000007037 #25	NSUN4 (ENSAPLG00000007241) #28	ENSAPLG00000007374 #31	ENSAPLG00000007474 #31	FAAH (ENSAPLG00000007898) #30	DMBX1 (ENSAPLG00000008404) #32	TMEM275 (ENSAPLG00000018210) #33	ENSAPLG00000008479 #35	MOB3C (ENSAPLG00000009181)	ATPAF1 (ENSAPLG00000009308) #36	EFCAB14 (ENSAPLG00000026113)	ENSAPLG00000009571	STIL (ENSAPLG00000010138)
Phasianidae	ANCESTRAL SPECIES	7	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b.`b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000155505.a #32	ENSGT00940000161237 #30	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Phasianidae_b	ANCESTRAL SPECIES	7	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b.`b.a #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000155505.a #32	ENSGT00940000161237 #30	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a	ENSGT00940000154660.b
Chicken	MODERN SPECIES	37	TOE1 (ENSGALG00010026093)	TESK2 (ENSGALG00010026106)	ENSGALG00010026111	MMACHC (ENSGALG00010026115)	PRDX1 (ENSGALG00010026128)	AKR1A1 (ENSGALG00010026213) #7	NASP (ENSGALG00010026287) #10	GPBP1L1 (ENSGALG00010026321) #12	TMEM69 (ENSGALG00010026325) #14	IPP (ENSGALG00010026335) #16	RBP (ENSGALG00010026367)	ENSGALG00010026498 #17	PIK3R3 (ENSGALG00010023309) #18	TSPAN1 (ENSGALG00010023330) #20	POMGNT1 (ENSGALG00010023073) #21	LURAP1 (ENSGALG00010023097) #22	RAD54L (ENSGALG00010023052) #23	LRRC41 (ENSGALG00010023090) #24	UQCRHL (ENSGALG00010023114) #25	NSUN4 (ENSGALG00010023124) #28	ENSGALG00010022999 #31	VDHAP (ENSGALG00010027076) #31	DMBX1 (ENSGALG00010022675) #32	MKNK1 (ENSGALG00010023356) #35	MOB3C (ENSGALG00010022860)	ATPAF1 (ENSGALG00010022867) #36	EFCAB14 (ENSGALG00010022874)	CYP4B7 (ENSGALG00010022917)	PDZK1IP1 (ENSGALG00010022948)	TAL1 (ENSGALG00010022991)	STIL (ENSGALG00010024669)
Turkey	MODERN SPECIES	1	ENSMGAG00000010823	ENSMGAG00000010752	ENSMGAG00000010784	ENSMGAG00000010747	ENSMGAG00000010732 #36	ENSMGAG00000010730	ENSMGAG00000010722 #35	ENSMGAG00000010718 #32	ENSMGAG00000010681 #31	ENSMGAG00000010684 #30	LRRC41 (ENSMGAG00000010654) #24	ENSMGAG00000010666 #25	NSUN4 (ENSMGAG00000010675) #28	ENSMGAG00000020766 #23	ENSMGAG00000010634 #23	LURAP1 (ENSMGAG00000010613) #22	ENSMGAG00000010616 #20	ENSMGAG00000010574 #21	PIK3R3 (ENSMGAG00000010604) #18	ENSMGAG00000010530 #17	GPBP1L1 (ENSMGAG00000019238) #12	ENSMGAG00000020097 #17	TMEM69 (ENSMGAG00000010500) #14	IPP (ENSMGAG00000010501) #16	ENSMGAG00000010515	ENSMGAG00000010470 #10	ENSMGAG00000010441 #7	ENSMGAG00000010420	ENSMGAG00000010417	ENSMGAG00000022085	ENSMGAG00000021918
Japanese quail	MODERN SPECIES	26	ENSCJPG00005009769	TOE1 (ENSCJPG00005009935)	TESK2 (ENSCJPG00005009939)	MMACHC (ENSCJPG00005009945)	PRDX1 (ENSCJPG00005009947)	AKR1A1 (ENSCJPG00005009995) #7	NASP (ENSCJPG00005009996) #10	GPBP1L1 (ENSCJPG00005009998) #12	TMEM69 (ENSCJPG00005010025) #14	IPP (ENSCJPG00005010026) #16	ENSCJPG00005010054	MAST2 (ENSCJPG00005010055) #17	PIK3R3 (ENSCJPG00005010056) #18	TSPAN1 (ENSCJPG00005010057) #20	POMGNT1 (ENSCJPG00005010058) #21	LURAP1 (ENSCJPG00005010059) #22	RAD54L (ENSCJPG00005010060) #23	LRRC41 (ENSCJPG00005010061) #24	NSUN4 (ENSCJPG00005010062) #28	ENSCJPG00005010063 #31	ENSCJPG00005010064 #31	FAAH (ENSCJPG00005010065) #30	DMBX1 (ENSCJPG00005010066) #32	TMEM275 (ENSCJPG00005010069) #33	ENSCJPG00005010070 #35	MOB3C (ENSCJPG00005010071)	ATPAF1 (ENSCJPG00005010072) #36	EFCAB14 (ENSCJPG00005010073)	ENSCJPG00005010074	ENSCJPG00005010075	TAL1 (ENSCJPG00005010076)
Neognathae_b	ANCESTRAL SPECIES	10	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Neognathae_c	ANCESTRAL SPECIES	7	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Golden eagle	MODERN SPECIES	3	TOE1 (ENSACCG00020008579)	TESK2 (ENSACCG00020008598)	ENSACCG00020008609	MMACHC (ENSACCG00020008615)	PRDX1 (ENSACCG00020008632)	AKR1A1 (ENSACCG00020008647) #7	NASP (ENSACCG00020008664) #10	GPBP1L1 (ENSACCG00020008683) #12	TMEM69 (ENSACCG00020008697) #14	IPP (ENSACCG00020008705) #16	ENSACCG00020008724	MAST2 (ENSACCG00020008823) #17	PIK3R3 (ENSACCG00020008935) #18	TSPAN1 (ENSACCG00020008954) #20	POMGNT1 (ENSACCG00020008982) #21	LURAP1 (ENSACCG00020008999) #22	ENSACCG00020009010	RAD54L (ENSACCG00020009028) #23	LRRC41 (ENSACCG00020009052) #24	ENSACCG00020009065 #25	ENSACCG00020009073	ENSACCG00020009114 #31	FAAH (ENSACCG00020009164) #30	DMBX1 (ENSACCG00020009185) #32	ENSACCG00020009204 #35	MOB3C (ENSACCG00020009219)	ATPAF1 (ENSACCG00020009237) #36	EFCAB14 (ENSACCG00020009253)	ENSACCG00020009272	ENSACCG00020009286	PDZK1IP1 (ENSACCG00020009303)
Kakapo	MODERN SPECIES	25	TOE1 (ENSSHBG00005000742)	ENSSHBG00005005312	ENSSHBG00005005335	MMACHC (ENSSHBG00005005343)	PRDX1 (ENSSHBG00005005359)	AKR1A1 (ENSSHBG00005005391) #7	NASP (ENSSHBG00005005428) #10	GPBP1L1 (ENSSHBG00005005468) #12	TMEM69 (ENSSHBG00005005478) #14	IPP (ENSSHBG00005005497) #16	ENSSHBG00005005524	MAST2 (ENSSHBG00005005596) #17	PIK3R3 (ENSSHBG00005005718) #18	TSPAN1 (ENSSHBG00005005758) #20	POMGNT1 (ENSSHBG00005005775) #21	LURAP1 (ENSSHBG00005005795) #22	RAD54L (ENSSHBG00005005827) #23	LRRC41 (ENSSHBG00005005972) #24	ENSSHBG00005006002 #25	NSUN4 (ENSSHBG00005006011) #28	ENSSHBG00005006024 #31	ENSSHBG00005006062 #31	FAAH (ENSSHBG00005006094) #30	DMBX1 (ENSSHBG00005006125) #32	TMEM275 (ENSSHBG00005006147) #33	ENSSHBG00005006177 #35	ENSSHBG00005006223	MOB3C (ENSSHBG00005006236)	ATPAF1 (ENSSHBG00005006246) #36	EFCAB14 (ENSSHBG00005006278)	ENSSHBG00005006306
Passeriformes	ANCESTRAL SPECIES	8	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Great tit	MODERN SPECIES	28	TOE1 (ENSPMJG00000019573)	TESK2 (ENSPMJG00000019575)	ENSPMJG00000019579	MMACHC (ENSPMJG00000019583)	PRDX1 (ENSPMJG00000019585)	AKR1A1 (ENSPMJG00000019587) #7	ENSPMJG00000019591 #10	GPBP1L1 (ENSPMJG00000019592) #12	TMEM69 (ENSPMJG00000019593) #14	IPP (ENSPMJG00000019594) #16	ENSPMJG00000019595	MAST2 (ENSPMJG00000019600) #17	PIK3R3 (ENSPMJG00000019608) #18	TSPAN1 (ENSPMJG00000019609) #20	POMGNT1 (ENSPMJG00000019610) #21	LURAP1 (ENSPMJG00000019612) #22	RAD54L (ENSPMJG00000019613) #23	LRRC41 (ENSPMJG00000019615) #24	ENSPMJG00000019616 #25	NSUN4 (ENSPMJG00000019620) #28	ENSPMJG00000019624 #31	ENSPMJG00000019627 #31	FAAH (ENSPMJG00000019628) #30	DMBX1 (ENSPMJG00000019630) #32	TMEM275 (ENSPMJG00000019631) #33	ENSPMJG00000019632 #35	MOB3C (ENSPMJG00000000048)	ATPAF1 (ENSPMJG00000000092) #36	EFCAB14 (ENSPMJG00000000135)	ENSPMJG00000000189	ENSPMJG00000000216
Passeriformes_d	ANCESTRAL SPECIES	9	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Flycatcher	MODERN SPECIES	27	TOE1 (ENSFALG00000005017)	TESK2 (ENSFALG00000026966)	ENSFALG00000009643	MMACHC (ENSFALG00000026112)	PRDX1 (ENSFALG00000009626)	NASP (ENSFALG00000009566) #10	AKR1A1 (ENSFALG00000009600) #7	GPBP1L1 (ENSFALG00000009548) #12	TMEM69 (ENSFALG00000009547) #14	IPP (ENSFALG00000009544) #16	ENSFALG00000009535	MAST2 (ENSFALG00000009528) #17	PIK3R3 (ENSFALG00000009521) #18	TSPAN1 (ENSFALG00000009516) #20	POMGNT1 (ENSFALG00000009510) #21	LURAP1 (ENSFALG00000009504) #22	RAD54L (ENSFALG00000009480) #23	LRRC41 (ENSFALG00000009461) #24	ENSFALG00000028231 #25	NSUN4 (ENSFALG00000028643) #28	ENSFALG00000009429 #31	ENSFALG00000009400 #30	ENSFALG00000024196 #32	ENSFALG00000009378 #35	MOB3C (ENSFALG00000009374)	ATPAF1 (ENSFALG00000028925) #36	EFCAB14 (ENSFALG00000009363)	ENSFALG00000009359	ENSFALG00000009327	PDZK1IP1 (ENSFALG00000009311)	TAL1 (ENSFALG00000009303)
Passeriformes_g	ANCESTRAL SPECIES	10	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Passeroidea	ANCESTRAL SPECIES	9	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01030000235254	ENSGT00390000003464	ENSGT00940000154277.a.b	ENSGT00940000156539 #7	ENSGT00390000016650 #10	ENSGT00420000029753.b #12	ENSGT00390000015318 #14	ENSGT00940000158629 #16	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000163316.b #31	ENSGT00940000163316.a.a #31	ENSGT00940000161237 #30	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00390000011196	ENSGT00940000161527.c.e	ENSGT00940000161527.d.a
Zebra finch	MODERN SPECIES	30	TOE1 (ENSTGUG00000007927)	TESK2 (ENSTGUG00000007934)	ENSTGUG00000028416	MMACHC (ENSTGUG00000028995)	PRDX1 (ENSTGUG00000023194)	AKR1A1 (ENSTGUG00000007993) #7	NASP (ENSTGUG00000008032) #10	GPBP1L1 (ENSTGUG00000008044) #12	TMEM69 (ENSTGUG00000008059) #14	IPP (ENSTGUG00000008061) #16	ENSTGUG00000020094	MAST2 (ENSTGUG00000008089) #17	PIK3R3 (ENSTGUG00000008122) #18	TSPAN1 (ENSTGUG00000008165) #20	POMGNT1 (ENSTGUG00000008179) #21	LURAP1 (ENSTGUG00000020108) #22	RAD54L (ENSTGUG00000008233) #23	LRRC41 (ENSTGUG00000008262) #24	UQCRH (ENSTGUG00000008278) #25	NSUN4 (ENSTGUG00000021857) #28	ENSTGUG00000008319 #31	ENSTGUG00000017201 #31	FAAH (ENSTGUG00000008323) #30	DMBX1 (ENSTGUG00000008353) #32	TMEM275 (ENSTGUG00000027598) #33	ENSTGUG00000008358 #35	MOB3C (ENSTGUG00000008386)	ATPAF1 (ENSTGUG00000008394) #36	ENSTGUG00000019172	EFCAB14 (ENSTGUG00000008408)	ENSTGUG00000008418
Common canary	MODERN SPECIES	9	TESK2 (ENSSCAG00000001234)	ENSSCAG00000001259	MMACHC (ENSSCAG00000001267)	PRDX1 (ENSSCAG00000001283)	AKR1A1 (ENSSCAG00000001310) #7	ENSSCAG00000001319 #10	ENSSCAG00000001327 #10	GPBP1L1 (ENSSCAG00000001337) #12	TMEM69 (ENSSCAG00000001344) #14	IPP (ENSSCAG00000001357) #16	ENSSCAG00000001368	MAST2 (ENSSCAG00000001759) #17	PIK3R3 (ENSSCAG00000003105) #18	TSPAN1 (ENSSCAG00000003114) #20	POMGNT1 (ENSSCAG00000003126) #21	LURAP1 (ENSSCAG00000003134) #22	RAD54L (ENSSCAG00000003152) #23	LRRC41 (ENSSCAG00000003220) #24	ENSSCAG00000003227 #25	NSUN4 (ENSSCAG00000003229) #28	ENSSCAG00000003233 #31	ENSSCAG00000003239 #30	DMBX1 (ENSSCAG00000003244) #32	TMEM275 (ENSSCAG00000003248) #33	ENSSCAG00000003252 #35	MOB3C (ENSSCAG00000003260)	ATPAF1 (ENSSCAG00000003265) #36	EFCAB14 (ENSSCAG00000003273)	ENSSCAG00000003281	ENSSCAG00000003305	PDZK1IP1 (ENSSCAG00000003514)
Australian saltwater crocodile	MODERN SPECIES	28	TESK2 (ENSCPRG00005017812)	ENSCPRG00005017818	ENSCPRG00005017821	MMACHC (ENSCPRG00005017827)	PRDX1 (ENSCPRG00005017830)	AKR1A1 (ENSCPRG00005017833) #7	NASP (ENSCPRG00005017842) #10	GPBP1L1 (ENSCPRG00005017857) #12	IPP (ENSCPRG00005017866) #16	ENSCPRG00005017875	MAST2 (ENSCPRG00005017882) #17	ENSCPRG00005017887	PIK3R3 (ENSCPRG00005017894) #18	TSPAN1 (ENSCPRG00005017902) #20	POMGNT1 (ENSCPRG00005017911) #21	LURAP1 (ENSCPRG00005017917) #22	LRRC41 (ENSCPRG00005017926) #24	ENSCPRG00005017930 #25	NSUN4 (ENSCPRG00005017933) #28	ENSCPRG00005017934 #31	ENSCPRG00005017938 #31	ENSCPRG00005017941 #31	RAD54L (ENSCPRG00005017943) #23	DMBX1 (ENSCPRG00005017947) #32	TMEM275 (ENSCPRG00005017950) #33	ENSCPRG00005017951 #35	MOB3C (ENSCPRG00005017953)	ATPAF1 (ENSCPRG00005017958) #36	ENSCPRG00005017961	EFCAB14 (ENSCPRG00005017964)	ENSCPRG00005017973
Anura	ANCESTRAL SPECIES	6	ENSGT00390000006806	ENSGT00940000156708.a.a	ENSGT00940000163721	ENSGT00390000012267	ENSGT00390000003817	ENSGT00940000161361	ENSGT00940000160152	ENSGT00940000161195	ENSGT00940000155828	ENSGT00390000010768	ENSGT00950000183144.B	ENSGT00940000155705.b #17	ENSGT00940000156259.b #18	ENSGT00940000158851 #20	ENSGT00530000063632.A #21	ENSGT00530000063790.a #22	ENSGT00940000156897 #23	ENSGT00390000015908 #24	ENSGT00390000003860 #25	ENSGT00940000153665.b.a.b #28	ENSGT00940000161237 #30	ENSGT00940000163316.c #31	ENSGT00940000155505.a #32	ENSGT00390000008086 #33	ENSGT00940000154587.a.a #35	ENSGT01050000244898.a.a.b	ENSGT00390000012765 #36	ENSGT00940000154586.a	ENSGT00390000011196	ENSGT00940000161527.a.b.a	ENSGT00940000161527.b
Frog	MODERN SPECIES	4	ENSXETG00000035284	dmap1 (ENSXETG00000001057)	klf17 (ENSXETG00000001058)	slc6a9 (ENSXETG00000003268)	ccdc24 (ENSXETG00000032737)	vwc2l.2 (ENSXETG00000003266)	ENSXETG00000045019	b4galt2 (ENSXETG00000003265)	atp6v0b (ENSXETG00000003260)	ENSXETG00000037795	izumo1r (ENSXETG00000003259)	mast2 (ENSXETG00000003254) #17	pik3r3 (ENSXETG00000003253) #18	tspan1 (ENSXETG00000004371) #20	pomgnt1 (ENSXETG00000004370) #21	lurap1 (ENSXETG00000024502) #22	ENSXETG00000046808	ENSXETG00000045488	rad54l (ENSXETG00000004369) #23	lrrc41 (ENSXETG00000036043) #24	uqcrh (ENSXETG00000042017) #25	nsun4 (ENSXETG00000024501) #28	faah.2 (ENSXETG00000004365) #30	faah.1 (ENSXETG00000024500) #31	faah.3 (ENSXETG00000004361) #31	ENSXETG00000043105	ENSXETG00000042239	dmbx1 (ENSXETG00000004360) #32	TMEM275 (ENSXETG00000045969) #33	ENSXETG00000035045	mknk1 (ENSXETG00000016357) #35
Leishan spiny toad	MODERN SPECIES	11	ENSLLEG00000028230	SLC6A9 (ENSLLEG00000028292)	ENSLLEG00000028525	ENSLLEG00000028633	ENSLLEG00000028643	ENSLLEG00000028660	B4GALT2 (ENSLLEG00000028676)	ENSLLEG00000028692	MAST2 (ENSLLEG00000028731) #17	ENSLLEG00000018129	PIK3R3 (ENSLLEG00000018155) #18	ENSLLEG00000018833	TSPAN1 (ENSLLEG00000019005) #20	POMGNT1 (ENSLLEG00000019672) #21	ENSLLEG00000020075	LURAP1 (ENSLLEG00000020094) #22	ENSLLEG00000020116	RAD54L (ENSLLEG00000020151) #23	LRRC41 (ENSLLEG00000020569) #24	ENSLLEG00000020771	NSUN4 (ENSLLEG00000020795) #28	FAAH (ENSLLEG00000020919) #30	ENSLLEG00000021081	ENSLLEG00000021125 #31	ENSLLEG00000021382 #31	ENSLLEG00000021738	ENSLLEG00000021759 #31	ENSLLEG00000021917	ENSLLEG00000021947	DMBX1 (ENSLLEG00000021978) #32	ENSLLEG00000022096
Coelacanth	MODERN SPECIES	2671																LURAP1 (ENSLACG00000001624) #22
Actinopterygii	ANCESTRAL SPECIES	97	ENSGT00940000156450	ENSGT00940000156945	ENSGT00530000063460.A.a	ENSGT00940000160126	ENSGT00940000160247	ENSGT00940000158038	ENSGT00390000007027	ENSGT00940000157721	ENSGT00410000029447	ENSGT00940000165489	ENSGT00940000162061	ENSGT00940000175231	ENSGT01000000214434.F	ENSGT00390000017123.a	ENSGT00940000159251	ENSGT00530000063790.a #22	ENSGT00530000063632.A #21	ENSGT00940000158851 #20	ENSGT00940000156259.a.b ##18	ENSGT00940000158629 #16	ENSGT00390000015318 #14	ENSGT00420000029753.b #12	ENSGT00940000167241	ENSGT00390000016650 #10	ENSGT00940000156539 #7	ENSGT00940000154277.a	ENSGT00390000018130.b	ENSGT00940000163309	ENSGT00390000002659	ENSGT01020000230412.A.c.b.d
Neopterygii	ANCESTRAL SPECIES	8	ENSGT00940000156450	ENSGT00940000156945	ENSGT00530000063460.A.a	ENSGT00940000160126	ENSGT00940000160247	ENSGT00940000158038	ENSGT00390000007027	ENSGT00940000157721	ENSGT00410000029447	ENSGT00940000165489	ENSGT00940000162061.a.a	ENSGT01000000214434.F	ENSGT00390000017123.a	ENSGT00940000159251	ENSGT00950000182879.a.b.a.a.b.a	ENSGT00530000063790.a #22	ENSGT00530000063632.A #21	ENSGT00940000158851 #20	ENSGT00940000156259.a.b ##18	ENSGT00940000158629 #16	ENSGT00390000015318 #14	ENSGT00420000029753.b #12	ENSGT00390000016650.c.b #10	ENSGT00940000167241	ENSGT00390000016650.c.a #10	ENSGT00940000156539 #7	ENSGT00940000154277.a	ENSGT00390000018130.b	ENSGT00940000163309	ENSGT00390000002659	ENSGT01020000230412.A.c.b.d
Osteoglossocephalai	ANCESTRAL SPECIES	224				ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT00390000008549	ENSGT00390000008338	ENSGT00940000166722	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a #22	ENSGT00940000167622	ENSGT00940000177205	ENSGT00940000163583	ENSGT00390000017201	ENSGT00940000155151.b.d	ENSGT00940000157892	ENSGT00390000017398	ENSGT01030000234635.a.a.a.a	ENSGT00940000156924	ENSGT00950000183036.a.a.g
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	108	ENSGT00940000157568	ENSGT00940000158648	ENSGT00940000157092	ENSGT00940000154568	ENSGT00940000158755	ENSGT00730000111209	ENSGT00390000018600	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00940000154396.b.b.a	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00940000177205	ENSGT00940000163583	ENSGT00390000017201	ENSGT00940000155151.b.d	ENSGT00940000157892	ENSGT00390000017398	ENSGT01030000234635.a.a.a.a	ENSGT00940000156924	ENSGT00950000183036.a.a.g
Otomorpha	ANCESTRAL SPECIES	281	ENSGT00940000157568	ENSGT00940000158648	ENSGT00940000157092	ENSGT00940000154568	ENSGT00940000158755	ENSGT00730000111209	ENSGT00390000018600	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00940000154396.b.b.a	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.a #22
Clupeiformes	ANCESTRAL SPECIES	106	ENSGT00390000013329	ENSGT00940000161021.a.a	ENSGT00390000000289	ENSGT00400000024256	ENSGT00940000159994	ENSGT00940000177177	ENSGT00940000153593	ENSGT00940000158081.o.a	ENSGT01030000235156	ENSGT00940000157166.c	ENSGT00940000157050.i.b	ENSGT00940000164804.b	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00940000156634.a	ENSGT00550000075004	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00940000165115.a	ENSGT00390000003420.b	ENSGT01030000234559.a.a.a	ENSGT00940000153617.A.a.a	ENSGT00940000159248	ENSGT00390000008296.a	ENSGT00940000163706
Atlantic herring	MODERN SPECIES	1	vcam1b (ENSCHAG00000024596)	GPR88 (ENSCHAG00000024593)	cdc14ab (ENSCHAG00000024541)	rtca (ENSCHAG00000024507)	dbt (ENSCHAG00000024460)	ENSCHAG00000024450	lrrc39 (ENSCHAG00000024444)	trmt13 (ENSCHAG00000024437)	sass6 (ENSCHAG00000024311)	mfsd14a1 (ENSCHAG00000024264)	rpp21 (ENSCHAG00000024260)	ENSCHAG00000024254	pars2 (ENSCHAG00000024251)	ttc4 (ENSCHAG00000024245)	TTC22 (ENSCHAG00000024240)	lurap1 (ENSCHAG00000024239) #22	stoml3b (ENSCHAG00000024235)	stoml3b (ENSCHAG00000024229)	plaat1 (ENSCHAG00000024219)	ftsj3 (ENSCHAG00000024173)	lim2.2 (ENSCHAG00000024170)	gpr35.1 (ENSCHAG00000024167)	gpr35.1 (ENSCHAG00000024165)	gpr35.1 (ENSCHAG00000024159)	gipc3 (ENSCHAG00000024148)	tbxa2r (ENSCHAG00000024143)	PTPRS (ENSCHAG00000010587)	kdm4b (ENSCHAG00000009900)	uhrf1 (ENSCHAG00000009703)	ticam1 (ENSCHAG00000009696)	pak2b (ENSCHAG00000009466)
Denticle herring	MODERN SPECIES	4	homer3b (ENSDCDG00000034242)	ENSDCDG00000034236	MAST3 (ENSDCDG00000034052)	PIK3R2 (ENSDCDG00000033897)	ENSDCDG00000033840	pars2 (ENSDCDG00000033835)	ttc4 (ENSDCDG00000033834)	plaat1 (ENSDCDG00000033833)	ftsj3 (ENSDCDG00000033832)	ENSDCDG00000033830	ENSDCDG00000033829	PIK3R2 (ENSDCDG00000033675)	ENSDCDG00000033624	pars2 (ENSDCDG00000033607)	TTC22 (ENSDCDG00000033605)	lurap1 (ENSDCDG00000033604) #22	plaat1 (ENSDCDG00000033603)	ftsj3 (ENSDCDG00000033602)	lim2.2 (ENSDCDG00000033599)	gpr35.1 (ENSDCDG00000033596)	ENSDCDG00000033594	gipc3 (ENSDCDG00000033592)	tbxa2r (ENSDCDG00000033588)	PTPRS (ENSDCDG00000012580)	kdm4b (ENSDCDG00000009943)	uhrf1 (ENSDCDG00000009520)	ticam1 (ENSDCDG00000009432)	polr2d (ENSDCDG00000009415)	ENSDCDG00000009404	ENSDCDG00000009398	ENSDCDG00000009391
Otophysi	ANCESTRAL SPECIES	32	ENSGT00940000157568	ENSGT00940000158648	ENSGT00940000157092	ENSGT00940000154568	ENSGT00940000158755	ENSGT00730000111209	ENSGT00390000018600	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00940000154396.b.b.a	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00410000025556.a.b	ENSGT00940000164897.a.a	ENSGT00390000005717.t	ENSGT00940000155212.ab.b.a	ENSGT00940000156262	ENSGT00960000186843	ENSGT00940000156968	ENSGT00940000159265	ENSGT00940000164867.b	ENSGT00980000198724	ENSGT00950000183070.a.a.mb.b.h	ENSGT00390000000263	ENSGT00940000155931.a	ENSGT00940000157401	ENSGT00390000009980
Characiphysae	ANCESTRAL SPECIES	2	ENSGT00940000157568	ENSGT00940000158648	ENSGT00940000157092	ENSGT00940000154568	ENSGT00940000158755	ENSGT00730000111209	ENSGT00390000018600	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00940000154396.b.b.a	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00410000025556.a.b	ENSGT00940000164897.a.a	ENSGT00390000005717.t	ENSGT00940000155212.ab.b.a	ENSGT00940000156262	ENSGT00940000156968	ENSGT00940000159265	ENSGT00940000164867.b	ENSGT00980000198724	ENSGT00950000183070.a.a.mb.b.h	ENSGT00390000000263	ENSGT00940000155931.a	ENSGT00940000157401	ENSGT00390000009980	ENSGT00390000002837
Channel catfish	MODERN SPECIES	2	ROR1 (ENSIPUG00000006822)	CACHD1 (ENSIPUG00000006905)	raver2 (ENSIPUG00000007082)	jak1 (ENSIPUG00000007138)	AK4 (ENSIPUG00000007289)	dnajc6 (ENSIPUG00000007320)	lepr (ENSIPUG00000007420)	pde4b (ENSIPUG00000007480)	SGIP1 (ENSIPUG00000007747)	ENSIPUG00000007788	Rln3 (ENSIPUG00000007802)	wdr78 (ENSIPUG00000007816)	pars2 (ENSIPUG00000007836)	Ttc4 (ENSIPUG00000007842)	TTC22 (ENSIPUG00000007868)	lurap1 (ENSIPUG00000007889) #22	wwc3 (ENSIPUG00000007911)	CLDN22 (ENSIPUG00000008005)	ENSIPUG00000008014	shroom2 (ENSIPUG00000008031)	LRRC7 (ENSIPUG00000008103)	lrrc40 (ENSIPUG00000008369)	MFI2 (ENSIPUG00000008433)	dlg1a (ENSIPUG00000008544)	ptmaa (ENSIPUG00000008760)	ENSIPUG00000008784	PDE6D (ENSIPUG00000008807)	pex5l (ENSIPUG00000008840)	usp13 (ENSIPUG00000008925)	ndufb5 (ENSIPUG00000009024)	mrpl47 (ENSIPUG00000009200)
Characiphysae_b	ANCESTRAL SPECIES		ENSGT00940000157568	ENSGT00940000158648	ENSGT00940000157092	ENSGT00940000154568	ENSGT00940000158755	ENSGT00730000111209	ENSGT00390000018600	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00940000154396.b.b.a	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00410000025556.a.b	ENSGT00940000164897.a.a	ENSGT00390000005717.t	ENSGT00940000155212.ab.b.a	ENSGT00940000156262	ENSGT00940000156968	ENSGT00940000159265	ENSGT00940000164867.b	ENSGT00980000198724	ENSGT00950000183070.a.a.mb.b.h	ENSGT00390000000263	ENSGT00940000155931.a	ENSGT00940000157401	ENSGT00390000009980	ENSGT00390000002837
Electric eel	MODERN SPECIES	205										SGIP1 (ENSEEEG00000015250)	ENSEEEG00000015251	dnai4 (ENSEEEG00000015253)	pars2 (ENSEEEG00000015254)	ttc4 (ENSEEEG00000015256)	TTC22 (ENSEEEG00000015259)	lurap1 (ENSEEEG00000015261) #22	wwc3 (ENSEEEG00000015262)	cldn33b (ENSEEEG00000015264)	ENSEEEG00000015265	ENSEEEG00000015267	ENSEEEG00000015269	LRRC7 (ENSEEEG00000015270)	ENSEEEG00000015280	lrrc40 (ENSEEEG00000015284)	ENSEEEG00000015295	dlg1a (ENSEEEG00000015312)	ENSEEEG00000015355	phb2b (ENSEEEG00000015360)	pde6d (ENSEEEG00000015512)	PEX5L (ENSEEEG00000015519)	usp13 (ENSEEEG00000015531)
Characoidei	ANCESTRAL SPECIES		ENSGT00940000157568	ENSGT00940000158648	ENSGT00940000157092	ENSGT00940000154568	ENSGT00940000158755	ENSGT00730000111209	ENSGT00390000018600	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00940000154396.b.b.a	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00410000025556.a.b	ENSGT00940000164897.a.a	ENSGT00390000005717.t	ENSGT00940000155212.ab.b.a	ENSGT00940000156262	ENSGT00940000156968	ENSGT00940000159265	ENSGT00940000164867.b	ENSGT00980000198724	ENSGT00950000183070.a.a.mb.b.h	ENSGT00390000000263	ENSGT00940000155931.a	ENSGT00940000157401	ENSGT00390000009980	ENSGT00390000002837
Red-bellied piranha	MODERN SPECIES	54								DNAJC6 (ENSPNAG00000024918)	lepr (ENSPNAG00000024985)	SGIP1 (ENSPNAG00000025017)	insl5a (ENSPNAG00000025031)	dnai4 (ENSPNAG00000025049)	pars2 (ENSPNAG00000003869)	ttc4 (ENSPNAG00000025124)	TTC22 (ENSPNAG00000025142)	lurap1 (ENSPNAG00000025167) #22	wwc3 (ENSPNAG00000025423)	cldn33b (ENSPNAG00000025451)	ENSPNAG00000025474	SHROOM2 (ENSPNAG00000025506)	LRRC7 (ENSPNAG00000005806)	lrrc40 (ENSPNAG00000025844)	ENSPNAG00000025929	dlg1a (ENSPNAG00000026060)	ptmaa (ENSPNAG00000026323)	ENSPNAG00000026360	phb2b (ENSPNAG00000004048)	pde6d (ENSPNAG00000026438)	PEX5L (ENSPNAG00000026476)	usp13 (ENSPNAG00000026639)	ndufb5 (ENSPNAG00000007145)
Mexicana tetra	MODERN SPECIES	4	odad3 (ENSAMXG00000010060)	ENSAMXG00000041296	SLC44A2 (ENSAMXG00000010071)	ENSAMXG00000010095	acp5a (ENSAMXG00000010099)	ilf3a (ENSAMXG00000010109)	ptger1a (ENSAMXG00000037178)	ENSAMXG00000039395	ENSAMXG00000010134	myh11a (ENSAMXG00000010147)	cep20 (ENSAMXG00000031287)	ube2g2 (ENSAMXG00000042279)	ENSAMXG00000010176	ttc4 (ENSAMXG00000010180)	TTC22 (ENSAMXG00000010184)	lurap1 (ENSAMXG00000038109) #22	ENSAMXG00000033562	wwc3 (ENSAMXG00000010683)	cldn33b (ENSAMXG00000024944)	ENSAMXG00000024942	ENSAMXG00000041335	ENSAMXG00000041293	LRRC7 (ENSAMXG00000010676)	lrrc40 (ENSAMXG00000010669)	ENSAMXG00000010664	dlg1a (ENSAMXG00000032689)	ptmaa (ENSAMXG00000043823)	phb2b (ENSAMXG00000010655)	pde6d (ENSAMXG00000039874)	cavin2b (ENSAMXG00000036683)	pars2 (ENSAMXG00000032578)
Cyprinoidei	ANCESTRAL SPECIES	2	ENSGT00940000153947.B	ENSGT00940000157568	ENSGT00940000158648	ENSGT00940000157092	ENSGT00940000154568	ENSGT00940000158755	ENSGT00730000111209	ENSGT00950000183297	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000154396.b.b.a	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00410000025556.a.b	ENSGT00940000164897.a.a	ENSGT00390000005717.t	ENSGT00940000155212.ab.b.a	ENSGT00940000156262	ENSGT00960000186843	ENSGT00940000156968	ENSGT00940000159265	ENSGT00940000164867.b	ENSGT00980000198724	ENSGT00950000183070.a.a.mb.b.h	ENSGT00390000000263	ENSGT00940000155931.a	ENSGT00940000157401	ENSGT00390000009980
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	12	ENSGT00940000153947.B.k	ENSGT00940000157568.f	ENSGT00940000158648.e	ENSGT00940000157092.y.a	ENSGT00940000154568.eb	ENSGT00940000158755.e	ENSGT00730000111209.p	ENSGT00950000183297	ENSGT00940000155190.bb.a.j	ENSGT00940000156301.a.a.a	ENSGT00940000174981	ENSGT00940000156209.r	ENSGT00390000010922.e	ENSGT00510000049371	ENSGT00390000007658.b	ENSGT00530000063790.a.a.a #22	ENSGT00410000025556.a.b.b	ENSGT00940000164897.a.a.a	ENSGT00390000005717.t.d	ENSGT00940000155212.ab.b.a.f	ENSGT00940000156262.w.b	ENSGT00940000156968.n	ENSGT00940000159265.a	ENSGT00940000164867.b.u	ENSGT00950000183070.a.a.mb.b.h.a	ENSGT00390000000263.j	ENSGT00940000155931.a.b	ENSGT00940000157401.c	ENSGT00390000009980.g.a	ENSGT00390000002837	ENSGT00940000156305.n.a
Cyprininae_a	ANCESTRAL SPECIES	23	ENSGT00940000155542.a.a	ENSGT00940000153947.B.k	ENSGT00940000157568.f	ENSGT00940000158648.e	ENSGT00940000157092.y.a	ENSGT00940000154568.eb	ENSGT00940000158755.e	ENSGT00730000111209.p	ENSGT00950000183297	ENSGT00940000155190.bb.a.j	ENSGT00940000156301.a.a.a	ENSGT00940000156209.r	ENSGT00390000010922.e	ENSGT00510000049371	ENSGT00390000007658.b	ENSGT00530000063790.a.a.a #22	ENSGT00410000025556.a.b.b	ENSGT00940000164897.a.a.a	ENSGT00390000005717.t.d	ENSGT00940000155212.ab.b.a.f	ENSGT00940000156262.w.b	ENSGT00940000156968.n	ENSGT00940000159265.a	ENSGT00940000164867.b.u	ENSGT00950000183070.a.a.mb.b.h.a	ENSGT00390000000263.j	ENSGT00940000155931.a.b	ENSGT00940000157401.c	ENSGT00390000009980.g.a	ENSGT00390000002837	ENSGT00940000156305.n.a
Golden-line barbel	MODERN SPECIES	130				ak4 (ENSSGRG00000013416)	DNAJC6 (ENSSGRG00000013417)	lepr (ENSSGRG00000013763)	PDE4B (ENSSGRG00000013773)	ENSSGRG00000014668	SGIP1 (ENSSGRG00000014669)	insl5a (ENSSGRG00000014671)	ENSSGRG00000014672	dnai4 (ENSSGRG00000014673)	pars2 (ENSSGRG00000014679)	ttc4 (ENSSGRG00000014675)	TTC22 (ENSSGRG00000014680)	lurap1 (ENSSGRG00000014681) #22	wwc3 (ENSSGRG00000014682)	cldn33b (ENSSGRG00000014829)	ENSSGRG00000014830	ENSSGRG00000014832	ENSSGRG00000014837	ENSSGRG00000014842	lrrc40 (ENSSGRG00000014843)	MELTF (ENSSGRG00000014988)	dlg1a (ENSSGRG00000015001)	ptmaa (ENSSGRG00000017391)	phb2b (ENSSGRG00000017392)	pde6d (ENSSGRG00000017400)	PEX5L (ENSSGRG00000017405)	usp13 (ENSSGRG00000017413)	ndufb5 (ENSSGRG00000017425)
Common carp reference	MODERN SPECIES	10	efcab7 (ENSCCRG00000004845)	pgm1 (ENSCCRG00000079082)	ROR1 (ENSCCRG00000056661)	CACHD1 (ENSCCRG00000060884)	RAVER2 (ENSCCRG00000018701)	jak1 (ENSCCRG00000021967)	ak4 (ENSCCRG00000033741)	DNAJC6 (ENSCCRG00000007720)	lepr (ENSCCRG00000007700)	PDE4B (ENSCCRG00000081716)	SGIP1 (ENSCCRG00000053959)	dnai4 (ENSCCRG00000023324)	pars2 (ENSCCRG00000077762)	ttc4 (ENSCCRG00000023321)	ENSCCRG00000023320	lurap1 (ENSCCRG00000023318) #22	wwc3 (ENSCCRG00000022000)	cldn33b (ENSCCRG00000072149)	ENSCCRG00000071672	SHROOM2 (ENSCCRG00000030510)	ENSCCRG00000022462	lrrc40 (ENSCCRG00000023944)	ENSCCRG00000069427	dlg1a (ENSCCRG00000031528)	phb2b (ENSCCRG00000022636)	pde6d (ENSCCRG00000022653)	PEX5L (ENSCCRG00000025069)	usp13 (ENSCCRG00000081978)	ndufb5 (ENSCCRG00000024735)	mrpl47 (ENSCCRG00000024741)	actl6a (ENSCCRG00000024746)
Goldfish	MODERN SPECIES	46	CACHD1 (ENSCARG00000003587)	RAVER2 (ENSCARG00000003573)	jak1 (ENSCARG00000003433)	ENSCARG00000003400	ak4 (ENSCARG00000003395)	DNAJC6 (ENSCARG00000003386)	lepr (ENSCARG00000003053)	PDE4B (ENSCARG00000001737)	ENSCARG00000001593	SGIP1 (ENSCARG00000001532)	ENSCARG00000001526	dnai4 (ENSCARG00000001506)	pars2 (ENSCARG00000001504)	ttc4 (ENSCARG00000001495)	TTC22 (ENSCARG00000001490)	lurap1 (ENSCARG00000001487) #22	wwc3 (ENSCARG00000001404)	cldn33b (ENSCARG00000001359)	ENSCARG00000001355	SHROOM2 (ENSCARG00000001330)	ENSCARG00000001316	LRRC7 (ENSCARG00000001120)	lrrc40 (ENSCARG00000001067)	ENSCARG00000001054	dlg1a (ENSCARG00000000979)	ENSCARG00000000944	phb2b (ENSCARG00000000905)	pde6d (ENSCARG00000000879)	ENSCARG00000000870	PEX5L (ENSCARG00000000856)	usp13 (ENSCARG00000000499)
Cyprininae	ANCESTRAL SPECIES	41	ENSGT00940000153733.B.g	ENSGT00940000155542.a.b	ENSGT00940000153947.B.l	ENSGT00940000157568.e	ENSGT00940000158648.f	ENSGT00940000157092.y.b	ENSGT00940000154568.db	ENSGT00940000158755.f	ENSGT00730000111209.o	ENSGT00940000155190.bb.a.i	ENSGT00940000156301.a.a.b	ENSGT00940000154396.b.b.a	ENSGT00940000156209.q	ENSGT00390000010922.f	ENSGT00390000007658.a	ENSGT00530000063790.a.a.b #22	ENSGT00410000025556.a.b.a	ENSGT00940000164897.a.a.b	ENSGT00390000005717.t.c	ENSGT00940000155212.ab.b.a.e	ENSGT00940000156262.x	ENSGT00940000156968.m	ENSGT00940000159265.b	ENSGT00940000164867.b.t	ENSGT00980000198724	ENSGT00950000183070.a.a.mb.b.h.b	ENSGT00390000000263.i.a.a	ENSGT00940000155931.a.a	ENSGT00940000157401.d	ENSGT00390000009980.g.b	ENSGT00940000156305.m
Goldfish	MODERN SPECIES	24	efcab7 (ENSCARG00000049399)	ROR1 (ENSCARG00000050251)	CACHD1 (ENSCARG00000050340)	RAVER2 (ENSCARG00000050820)	jak1 (ENSCARG00000051008)	ak4 (ENSCARG00000057519)	DNAJC6 (ENSCARG00000057535)	lepr (ENSCARG00000057638)	ENSCARG00000058288	PDE4B (ENSCARG00000058317)	ENSCARG00000058778	SGIP1 (ENSCARG00000058810)	insl5a (ENSCARG00000058937)	ENSCARG00000058958	TTC22 (ENSCARG00000058991)	lurap1 (ENSCARG00000059010) #22	wwc3 (ENSCARG00000059019)	cldn33b (ENSCARG00000059055)	SHROOM2 (ENSCARG00000059073)	LRRC7 (ENSCARG00000059223)	ENSCARG00000061347	dlg1a (ENSCARG00000061653)	ENSCARG00000066606	phb2b (ENSCARG00000066629)	pde6d (ENSCARG00000066742)	PEX5L (ENSCARG00000066782)	usp13 (ENSCARG00000066836)	ndufb5 (ENSCARG00000066950)	ACTL6A (ENSCARG00000066963)	TMEM131 (ENSCARG00000067064)	si:ch211-201h21.5 (ENSCARG00000067367)
Cyprininae_a	ANCESTRAL SPECIES	10	ENSGT00390000015466.b	ENSGT00940000155542.a.b	ENSGT00940000153947.B.l	ENSGT00940000157568.e	ENSGT00940000158648.f	ENSGT00940000157092.y.b	ENSGT00940000154568.db	ENSGT00940000158755.f	ENSGT00730000111209.o	ENSGT00940000155190.bb.a.i	ENSGT00940000156301.a.a.b	ENSGT00940000154396.b.b.a	ENSGT00940000156209.q	ENSGT00390000010922.f	ENSGT00390000007658.a	ENSGT00530000063790.a.a.b #22	ENSGT00410000025556.a.b.a	ENSGT00940000164897.a.a.b	ENSGT00390000005717.t.c	ENSGT00940000155212.ab.b.a.e	ENSGT00940000156262.x	ENSGT00940000156968.m	ENSGT00940000159265.b	ENSGT00940000164867.b.t	ENSGT00980000198724	ENSGT00950000183070.a.a.mb.b.h.b	ENSGT00390000000263.i.a.a	ENSGT00940000155931.a.a	ENSGT00940000157401.d	ENSGT00390000009980.g.b	ENSGT00940000156305.n.b
Common carp reference	MODERN SPECIES	16	pgm1 (ENSCCRG00000073057)	ROR1 (ENSCCRG00000014885)	CACHD1 (ENSCCRG00000017861)	RAVER2 (ENSCCRG00000045941)	ak4 (ENSCCRG00000071599)	jak1 (ENSCCRG00000033813)	DNAJC6 (ENSCCRG00000033726)	lepr (ENSCCRG00000033711)	PDE4B (ENSCCRG00000022216)	SGIP1 (ENSCCRG00000022192)	insl5a (ENSCCRG00000022189)	dnai4 (ENSCCRG00000081904)	pars2 (ENSCCRG00000060048)	ENSCCRG00000071260	ENSCCRG00000022180	lurap1 (ENSCCRG00000022178) #22	wwc3 (ENSCCRG00000082360)	cldn33b (ENSCCRG00000053773)	ENSCCRG00000069041	SHROOM2 (ENSCCRG00000000133)	lrrc40 (ENSCCRG00000068853)	ENSCCRG00000051679	ENSCCRG00000023992	dlg1a (ENSCCRG00000037322)	ptmaa (ENSCCRG00000080418)	phb2b (ENSCCRG00000037333)	pde6d (ENSCCRG00000070951)	PEX5L (ENSCCRG00000064819)	usp13 (ENSCCRG00000024629)	ndufb5 (ENSCCRG00000061361)	actl6a (ENSCCRG00000036950)
Golden-line barbel	MODERN SPECIES	137	pgm1 (ENSSGRG00000022805)	ROR1 (ENSSGRG00000022800)	CACHD1 (ENSSGRG00000022754)	ENSSGRG00000022753	jak1 (ENSSGRG00000018024)	ak4 (ENSSGRG00000017992)	DNAJC6 (ENSSGRG00000017991)	lepr (ENSSGRG00000017923)	PDE4B (ENSSGRG00000017059)	SGIP1 (ENSSGRG00000017057)	insl5a (ENSSGRG00000017056)	ENSSGRG00000017055	pars2 (ENSSGRG00000017054)	ttc4 (ENSSGRG00000017030)	TTC22 (ENSSGRG00000017029)	lurap1 (ENSSGRG00000017028) #22	wwc3 (ENSSGRG00000017027)	cldn33b (ENSSGRG00000017026)	ENSSGRG00000017025	SHROOM2 (ENSSGRG00000017024)	ENSSGRG00000017023	lrrc40 (ENSSGRG00000017021)	MELTF (ENSSGRG00000017020)	dlg1a (ENSSGRG00000013782)	ptmaa (ENSSGRG00000013737)	phb2b (ENSSGRG00000013668)	pde6d (ENSSGRG00000013666)
Zebrafish	MODERN SPECIES	21	ENSDARG00000095914	ROR1 (ENSDARG00000015176)	CACHD1 (ENSDARG00000061590)	RAVER2 (ENSDARG00000075034)	jak1 (ENSDARG00000020625)	ak4 (ENSDARG00000006546)	DNAJC6 (ENSDARG00000079891)	lepr (ENSDARG00000070961)	PDE4B (ENSDARG00000032868)	SGIP1 (ENSDARG00000097897)	insl5a (ENSDARG00000070966)	dnai4 (ENSDARG00000044400)	pars2 (ENSDARG00000044404)	ttc4 (ENSDARG00000044405)	TTC22 (ENSDARG00000077836)	lurap1 (ENSDARG00000115301) #22	wwc3 (ENSDARG00000061654)	cldn33b (ENSDARG00000015964)	ENSDARG00000087805	ENSDARG00000076416	LRRC7 (ENSDARG00000079670)	lrrc40 (ENSDARG00000017708)	MELTF (ENSDARG00000075159)	dlg1a (ENSDARG00000009677)	ptmaa (ENSDARG00000021113)	phb2b (ENSDARG00000017728)	pde6d (ENSDARG00000074892)	PEX5L (ENSDARG00000022518)	usp13 (ENSDARG00000079198)	ndufb5 (ENSDARG00000070824)	mrpl47 (ENSDARG00000075743)
Euteleosteomorpha	ANCESTRAL SPECIES	70	ENSGT00940000157568	ENSGT00940000158648	ENSGT00940000157092	ENSGT00940000154568	ENSGT00940000158755	ENSGT00730000111209	ENSGT00390000018600	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00940000154396.b.b.a	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00940000177205	ENSGT00940000163583	ENSGT00390000017201	ENSGT00940000155151.b.d	ENSGT00940000157892	ENSGT00390000017398	ENSGT00990000211775	ENSGT01030000234635.a.a.a.a	ENSGT00940000156924	ENSGT00950000183036.a.a.g	ENSGT00940000154667.b.a	ENSGT00940000157607	ENSGT00390000004674.i.b	ENSGT00390000004674.j	ENSGT00940000157064.a.b.a
Acanthomorphata	ANCESTRAL SPECIES	296								ENSGT00390000018600	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.a #22
Euacanthomorphacea	ANCESTRAL SPECIES	31					ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00390000018600	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243
Percomorphaceae	ANCESTRAL SPECIES	32				ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00390000018600	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000178094	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Tiger tail seahorse	MODERN SPECIES	242	pdcb (ENSHCOG00000006701)	ENSHCOG00000006697	ptgs2b (ENSHCOG00000006679)	PLA2G4A (ENSHCOG00000006631)	arpc5b (ENSHCOG00000006582)	ENSHCOG00000006545	PDE4B (ENSHCOG00000006349)	SGIP1 (ENSHCOG00000006326)	ENSHCOG00000006288	pars2 (ENSHCOG00000006282)	ttc4 (ENSHCOG00000006269)	ENSHCOG00000006266	ENSHCOG00000006254	ENSHCOG00000006130	TTC22 (ENSHCOG00000006114)	lurap1 (ENSHCOG00000006082) #22	lepr (ENSHCOG00000006066)	ENSHCOG00000006034	DNAJC6 (ENSHCOG00000006026)	ak4 (ENSHCOG00000005992)	ENSHCOG00000005987	jak1 (ENSHCOG00000005975)	RAVER2 (ENSHCOG00000005933)	CACHD1 (ENSHCOG00000005915)	ENSHCOG00000005879	ROR1 (ENSHCOG00000005863)	pgm1 (ENSHCOG00000005838)	efcab7 (ENSHCOG00000005809)	alg6 (ENSHCOG00000005618)
Percomorphaceae_B	ANCESTRAL SPECIES	9	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000178094	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Ovalentaria	ANCESTRAL SPECIES	9	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b	ENSGT00940000178094	ENSGT00940000163701.b.a.a.a.b.c.a.r	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Atherinomorphae	ANCESTRAL SPECIES	7	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b	ENSGT00940000178094	ENSGT00940000163701.b.a.a.a.b.c.a.r	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Cyprinodontiformes	ANCESTRAL SPECIES	7	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.r	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b	ENSGT00940000178094	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Aplocheiloidei	ANCESTRAL SPECIES	3	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.r	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b	ENSGT00940000178094	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Mangrove rivulus	MODERN SPECIES	53	ivns1abpa (ENSKMAG00000012562)	ENSKMAG00000012533	anos1b (ENSKMAG00000012498)	ENSKMAG00000012462	PDE4B (ENSKMAG00000012376)	SGIP1 (ENSKMAG00000012270)	ENSKMAG00000012237	pars2 (ENSKMAG00000012222)	ttc4 (ENSKMAG00000012196)	ENSKMAG00000012171	ENSKMAG00000012151	ENSKMAG00000012133	ENSKMAG00000012121	ENSKMAG00000012104	TTC22 (ENSKMAG00000012093)	lurap1 (ENSKMAG00000012079) #22	lepr (ENSKMAG00000011984)	ENSKMAG00000011950	DNAJC6 (ENSKMAG00000011882)	ak4 (ENSKMAG00000011826)	jak1 (ENSKMAG00000011718)	RAVER2 (ENSKMAG00000011656)	CACHD1 (ENSKMAG00000011523)	ROR1 (ENSKMAG00000011440)	pgm1 (ENSKMAG00000011390)	efcab7 (ENSKMAG00000011356)	alg6 (ENSKMAG00000011332)	foxd3 (ENSKMAG00000011317)	atg4c (ENSKMAG00000011290)	angptl3 (ENSKMAG00000011249)	DOCK7 (ENSKMAG00000011135)
Turquoise killifish	MODERN SPECIES	1626	ivns1abpa (ENSNFUG00015007376)	ENSNFUG00015007367	KAL1B (ENSNFUG00015007356)	senp5 (ENSNFUG00015007348)	PDE4B (ENSNFUG00015007078)	SGIP1 (ENSNFUG00015007046)	INSL5A (ENSNFUG00015007038)	PARS2 (ENSNFUG00015007033)	ttc4 (ENSNFUG00015007007)	ENSNFUG00015006982	ENSNFUG00015006966	ENSNFUG00015006953	ENSNFUG00015006937	ENSNFUG00015006931	TTC22 (ENSNFUG00015006925)	LURAP1 (ENSNFUG00015006920) #22	lepr (ENSNFUG00015005454)	ENSNFUG00015005240	DNAJC6 (ENSNFUG00015005190)	AK4 (ENSNFUG00015025400)	JAK1 (ENSNFUG00015025398)	RAVER2 (ENSNFUG00015025397)	ENSNFUG00015025396	ENSNFUG00015025395	CACHD1 (ENSNFUG00015025394)	ROR1 (ENSNFUG00015025393)	pgm1 (ENSNFUG00015025392)	ENSNFUG00015025391	alg6 (ENSNFUG00015025390)	FOXD3 (ENSNFUG00015025389)	ATG4C (ENSNFUG00015025388)
Cyprinodontoidei	ANCESTRAL SPECIES	29	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.r	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Poeciliinae	ANCESTRAL SPECIES	7	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.r.a.a.a	ENSGT00940000163701.b.a.a.a.b.c.a.r.b	ENSGT00940000163701.b.a.a.a.b.c.a.r.a.b	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661.ib
Poecilia	ANCESTRAL SPECIES	1	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.r.a.a.a	ENSGT00940000163701.b.a.a.a.b.c.a.r.b	ENSGT00940000163701.b.a.a.a.b.c.a.r.a.b	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661.ib
NAME_6	ANCESTRAL SPECIES	59	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00390000018600	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.r.a.a.a	ENSGT00940000163701.b.a.a.a.b.c.a.r.b	ENSGT00940000163701.b.a.a.a.b.c.a.r.a.b	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b.i	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661.ib
Sailfin molly	MODERN SPECIES	2780															TTC22 (ENSPLAG00000007973)	lurap1 (ENSPLAG00000007990) #22	ENSPLAG00000009365
Amazon molly	MODERN SPECIES	290	ENSPFOG00000024496	ENSPFOG00000010814	ENSPFOG00000023340	PDE4B (ENSPFOG00000010693)	SGIP1 (ENSPFOG00000010553)	ENSPFOG00000022348	pars2 (ENSPFOG00000010522)	ttc4 (ENSPFOG00000024346)	ENSPFOG00000010517	ENSPFOG00000023034	ENSPFOG00000022692	ENSPFOG00000022822	ENSPFOG00000010506	ENSPFOG00000010499	TTC22 (ENSPFOG00000010435)	lurap1 (ENSPFOG00000010426) #22	lepr (ENSPFOG00000010242)	ENSPFOG00000022274	DNAJC6 (ENSPFOG00000009918)	DNAJC6 (ENSPFOG00000009899)	ak4 (ENSPFOG00000009906)	jak1 (ENSPFOG00000009493)	RAVER2 (ENSPFOG00000009386)	CACHD1 (ENSPFOG00000008959)	ROR1 (ENSPFOG00000008799)	efcab7 (ENSPFOG00000008536)	alg6 (ENSPFOG00000008416)	foxd3 (ENSPFOG00000020300)	atg4c (ENSPFOG00000008338)	angptl3 (ENSPFOG00000008280)	DOCK7 (ENSPFOG00000007254)
Guppy	MODERN SPECIES	460	HMCN1 (ENSPREG00000009231)	ENSPREG00000009457	ivns1abpa (ENSPREG00000009477)	anos1b (ENSPREG00000009555)	senp5 (ENSPREG00000009593)	PDE4B (ENSPREG00000009655)	SGIP1 (ENSPREG00000009713)	ENSPREG00000009783	pars2 (ENSPREG00000009788)	ttc4 (ENSPREG00000009801)	ENSPREG00000009835	ENSPREG00000009888	ENSPREG00000009891	ENSPREG00000009898	TTC22 (ENSPREG00000009910)	lurap1 (ENSPREG00000009921) #22	lepr (ENSPREG00000010068)	DNAJC6 (ENSPREG00000010912)	ENSPREG00000010932	ENSPREG00000010945	fbxl16 (ENSPREG00000010975)	smg1 (ENSPREG00000011026)	ENSPREG00000011181	hao1 (ENSPREG00000011203)	RRN3 (ENSPREG00000011272)	ENSPREG00000011311	wipi1 (ENSPREG00000011331)	SLC16A6 (ENSPREG00000011375)	gna13a (ENSPREG00000011390)	rgs9a (ENSPREG00000011416)	COG1 (ENSPREG00000011446)
Platyfish	MODERN SPECIES	23	ENSXMAG00000023472	ENSXMAG00000002309	senp5 (ENSXMAG00000002306)	PDE4B (ENSXMAG00000023428)	SGIP1 (ENSXMAG00000026491)	ENSXMAG00000029945	pars2 (ENSXMAG00000002269)	ttc4 (ENSXMAG00000022385)	ENSXMAG00000025937	ENSXMAG00000002263	ENSXMAG00000026643	ENSXMAG00000023337	ENSXMAG00000002260	ENSXMAG00000002258	TTC22 (ENSXMAG00000002256)	lurap1 (ENSXMAG00000027810) #22	lepr (ENSXMAG00000002246)	ENSXMAG00000020073	DNAJC6 (ENSXMAG00000002240)	ak4 (ENSXMAG00000002237)	jak1 (ENSXMAG00000002212)	RAVER2 (ENSXMAG00000002206)	CACHD1 (ENSXMAG00000002196)	ROR1 (ENSXMAG00000002185)	pgm1 (ENSXMAG00000002175)	efcab7 (ENSXMAG00000002173)	alg6 (ENSXMAG00000002171)	foxd3 (ENSXMAG00000029818)	atg4c (ENSXMAG00000011389)	angptl3 (ENSXMAG00000010042)	ENSXMAG00000026418
NAME_4	ANCESTRAL SPECIES	62														ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Sheepshead minnow	MODERN SPECIES	288	ENSCVAG00000003073	ENSCVAG00000003063	vtg5 (ENSCVAG00000003051)	ctbs (ENSCVAG00000003017)	SPATA1 (ENSCVAG00000002998)	ENSCVAG00000002968	rpf1 (ENSCVAG00000000086)	ENSCVAG00000002943	DNASE2B (ENSCVAG00000002928)	uox (ENSCVAG00000002913)	samd13 (ENSCVAG00000002845)	ENSCVAG00000002835	ttll7 (ENSCVAG00000002801)	ENSCVAG00000002780	ENSCVAG00000002776	lurap1 (ENSCVAG00000002771) #22	lepr (ENSCVAG00000002765)	DNAJC6 (ENSCVAG00000002755)	ENSCVAG00000002748	ak4 (ENSCVAG00000002745)	jak1 (ENSCVAG00000002739)	RAVER2 (ENSCVAG00000002687)	CACHD1 (ENSCVAG00000002667)	ROR1 (ENSCVAG00000002621)	pgm1 (ENSCVAG00000002615)	efcab7 (ENSCVAG00000002607)	alg6 (ENSCVAG00000002600)	foxd3 (ENSCVAG00000002594)
Mummichog	MODERN SPECIES	2395													ENSFHEG00000023198	ENSFHEG00000001256	TTC22 (ENSFHEG00000001263)	lurap1 (ENSFHEG00000001264) #22	lepr (ENSFHEG00000001269)	ENSFHEG00000001274	DNAJC6 (ENSFHEG00000001278)	ak4 (ENSFHEG00000001284)	jak1 (ENSFHEG00000001301)	RAVER2 (ENSFHEG00000001322)	CACHD1 (ENSFHEG00000001343)	ROR1 (ENSFHEG00000001360)	pgm1 (ENSFHEG00000001381)	efcab7 (ENSFHEG00000001397)	alg6 (ENSFHEG00000001403)	foxd3 (ENSFHEG00000001408)	atg4c (ENSFHEG00000001413)	angptl3 (ENSFHEG00000001417)	DOCK7 (ENSFHEG00000001444)
Oryzias	ANCESTRAL SPECIES	5	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b.m	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000155661	ENSGT00940000156746.a	ENSGT00910000144243
Oryzias_a	ANCESTRAL SPECIES	14	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b.m.d	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b.m.c	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b.n	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000155661	ENSGT00940000156746.a	ENSGT00910000144243
Chinese medaka	MODERN SPECIES	41	PLA2G4A (ENSOSIG00000019110)	arpc5b (ENSOSIG00000019230)	ivns1abpa (ENSOSIG00000019312)	ENSOSIG00000019340	anos1b (ENSOSIG00000019348)	ENSOSIG00000019352	PDE4B (ENSOSIG00000019372)	ENSOSIG00000019413	SGIP1 (ENSOSIG00000019416)	ENSOSIG00000019417	pars2 (ENSOSIG00000019420)	ENSOSIG00000019423	ENSOSIG00000019426	ENSOSIG00000019431	TTC22 (ENSOSIG00000019437)	lurap1 (ENSOSIG00000019440) #22	DNAJC6 (ENSOSIG00000019470)	ak4 (ENSOSIG00000019604)	jak1 (ENSOSIG00000019729)	ENSOSIG00000021595	ENSOSIG00000021599	CACHD1 (ENSOSIG00000021622)	ROR1 (ENSOSIG00000021655)	pgm1 (ENSOSIG00000021670)	efcab7 (ENSOSIG00000021878)	alg6 (ENSOSIG00000021905)	foxd3 (ENSOSIG00000021915)	atg4c (ENSOSIG00000021916)	DOCK7 (ENSOSIG00000022228)	angptl3 (ENSOSIG00000022447)	usp1 (ENSOSIG00000022451)
Japanese Medaka HdrR	MODERN SPECIES	18	ENSORLG00000009682	anos1b (ENSORLG00000009706)	ENSORLG00000026071	PDE4B (ENSORLG00000009796)	ENSORLG00000024429	SGIP1 (ENSORLG00000009850)	ENSORLG00000026039	pars2 (ENSORLG00000025001)	ENSORLG00000009911	ENSORLG00000025806	ttc4 (ENSORLG00000009904)	ENSORLG00000009855	ENSORLG00000022609	ENSORLG00000023913	TTC22 (ENSORLG00000009920)	lurap1 (ENSORLG00000009924) #22	lepr (ENSORLG00000009937)	ENSORLG00000022484	DNAJC6 (ENSORLG00000009969)	ak4 (ENSORLG00000009987)	jak1 (ENSORLG00000010063)	RAVER2 (ENSORLG00000010073)	CACHD1 (ENSORLG00000010145)	ROR1 (ENSORLG00000010196)	pgm1 (ENSORLG00000010265)	efcab7 (ENSORLG00000010304)	alg6 (ENSORLG00000010347)	foxd3 (ENSORLG00000010359)	atg4c (ENSORLG00000010404)	DOCK7 (ENSORLG00000010464)	angptl3 (ENSORLG00000010477)
Oryzias_b	ANCESTRAL SPECIES	15	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b.m.a	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b.m.b	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243
Indian medaka	MODERN SPECIES	13	ivns1abpa (ENSOMEG00000006581)	ENSOMEG00000006607	ENSOMEG00000006637	senp5 (ENSOMEG00000006660)	PDE4B (ENSOMEG00000006755)	SGIP1 (ENSOMEG00000007046)	ENSOMEG00000007097	pars2 (ENSOMEG00000007136)	ttc4 (ENSOMEG00000007124)	ENSOMEG00000007150	ENSOMEG00000007205	ENSOMEG00000007277	ENSOMEG00000007342	ENSOMEG00000007359	TTC22 (ENSOMEG00000007377)	lurap1 (ENSOMEG00000007386) #22	lepr (ENSOMEG00000007461)	DNAJC6 (ENSOMEG00000007567)	ak4 (ENSOMEG00000007620)	jak1 (ENSOMEG00000007715)	RAVER2 (ENSOMEG00000007789)	CACHD1 (ENSOMEG00000007958)	ROR1 (ENSOMEG00000008043)	pgm1 (ENSOMEG00000008079)	efcab7 (ENSOMEG00000008114)	alg6 (ENSOMEG00000008138)	foxd3 (ENSOMEG00000008152)	atg4c (ENSOMEG00000008186)	angptl3 (ENSOMEG00000008204)	DOCK7 (ENSOMEG00000008295)	usp1 (ENSOMEG00000008356)
Javanese ricefish	MODERN SPECIES	18	PLA2G4A (ENSOJAG00000000872)	arpc5b (ENSOJAG00000001367)	ivns1abpa (ENSOJAG00000001586)	ENSOJAG00000001623	anos1b (ENSOJAG00000001651)	senp5 (ENSOJAG00000001668)	PDE4B (ENSOJAG00000001789)	SGIP1 (ENSOJAG00000001870)	ENSOJAG00000001904	pars2 (ENSOJAG00000001913)	ttc4 (ENSOJAG00000001935)	ENSOJAG00000001998	ENSOJAG00000002028	ENSOJAG00000002088	ENSOJAG00000002096	lurap1 (ENSOJAG00000002112) #22	lepr (ENSOJAG00000002399)	DNAJC6 (ENSOJAG00000003457)	ak4 (ENSOJAG00000003755)	jak1 (ENSOJAG00000003942)	RAVER2 (ENSOJAG00000004352)	CACHD1 (ENSOJAG00000004436)	ROR1 (ENSOJAG00000005029)	efcab7 (ENSOJAG00000005212)	alg6 (ENSOJAG00000005630)	foxd3 (ENSOJAG00000005675)	atg4c (ENSOJAG00000005695)	DOCK7 (ENSOJAG00000006559)	angptl3 (ENSOJAG00000013433)	usp1 (ENSOJAG00000013442)	ENSOJAG00000013489
Ovalentaria_B	ANCESTRAL SPECIES	8	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.b	ENSGT00940000163701.b.a.a.a.b.c.a.r	ENSGT00940000163701.b.a.a.a.b.c.a.q.b.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243
Cichlidae	ANCESTRAL SPECIES	43														ENSGT00940000163701.b.a.a.a.b.d	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243
Pseudocrenilabrinae	ANCESTRAL SPECIES	23	ENSGT00940000160423.b	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.b.a	ENSGT00940000163701.b.a.a.a.b.d	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243
Nile tilapia	MODERN SPECIES	8	fgfr1op2 (ENSONIG00000011894)	TM7SF3 (ENSONIG00000011896)	gas2l3 (ENSONIG00000011899)	arid2 (ENSONIG00000011901)	ENSONIG00000011907	slc38a4 (ENSONIG00000011911)	AMIGO2 (ENSONIG00000037740)	ANO4 (ENSONIG00000011913)	NXPE3 (ENSONIG00000014091)	ENSONIG00000031592	ENSONIG00000009979	ccl25b (ENSONIG00000040787)	ENSONIG00000009981	ENSONIG00000011921	ENSONIG00000011923	lurap1 (ENSONIG00000037764) #22	lepr (ENSONIG00000011926)	DNAJC6 (ENSONIG00000008789)	ak4 (ENSONIG00000008798)	jak1 (ENSONIG00000008800)	RAVER2 (ENSONIG00000008808)	ENSONIG00000008813	CACHD1 (ENSONIG00000008810)	ROR1 (ENSONIG00000008814)	pgm1 (ENSONIG00000008819)	alg6 (ENSONIG00000008823)	foxd3 (ENSONIG00000021415)	atg4c (ENSONIG00000008825)	angptl3 (ENSONIG00000008833)	DOCK7 (ENSONIG00000008826)	usp1 (ENSONIG00000008834)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	10	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.b.a	ENSGT00940000177278.b	ENSGT00940000163701.b.a.a.a.b.d	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243
Haplochromini	ANCESTRAL SPECIES	9	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.b.a	ENSGT00940000177278.b	ENSGT00940000163701.b.a.a.a.b.d	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243
Haplochromini_A	ANCESTRAL SPECIES	9	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.b.a	ENSGT00900000141362.a.b.c.b	ENSGT00940000177278.b	ENSGT00940000163701.b.a.a.a.b.d	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243
P. nyererei	MODERN SPECIES	425	BMAL2 (ENSPNYG00000014760)	stk38l (ENSPNYG00000014721)	med21 (ENSPNYG00000014699)	fgfr1op2 (ENSPNYG00000014678)	TM7SF3 (ENSPNYG00000014644)	gas2l3 (ENSPNYG00000014617)	arid2 (ENSPNYG00000014572)	ENSPNYG00000014553	slc38a2 (ENSPNYG00000014524)	slc38a4 (ENSPNYG00000014426)	AMIGO2 (ENSPNYG00000014386)	ANO4 (ENSPNYG00000014338)	NXPE3 (ENSPNYG00000014322)	ccl25b (ENSPNYG00000014303)	TTC22 (ENSPNYG00000014284)	lurap1 (ENSPNYG00000014267) #22	lepr (ENSPNYG00000014229)	DNAJC6 (ENSPNYG00000014192)	ak4 (ENSPNYG00000014169)	jak1 (ENSPNYG00000013970)	ENSPNYG00000013951	ENSPNYG00000013943	CACHD1 (ENSPNYG00000013908)
Haplochromini_B	ANCESTRAL SPECIES	32	ENSGT00390000014557	ENSGT00390000018003.b	ENSGT00390000008702	ENSGT00940000159389	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000158600	ENSGT00950000182866.D.d.a.c.b.a.a.b.a	ENSGT00900000141362.a.b.c.b	ENSGT00940000177278.b	ENSGT00940000163701.b.a.a.a.b.d	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B.e.a	ENSGT00940000153947.B.f	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Zebra mbuna	MODERN SPECIES	1099	gas2l3 (ENSMZEG00005014932)	arid2 (ENSMZEG00005014910)	ENSMZEG00005014878	slc38a2 (ENSMZEG00005014826)	slc38a4 (ENSMZEG00005014625)	AMIGO2 (ENSMZEG00005014613)	ANO4 (ENSMZEG00005014601)	NXPE3 (ENSMZEG00005014593)	ccl25b (ENSMZEG00005014587)	ENSMZEG00005014582	ENSMZEG00005014576	ENSMZEG00005014574	ENSMZEG00005014569	ENSMZEG00005014562	TTC22 (ENSMZEG00005014557)	lurap1 (ENSMZEG00005014553) #22	lepr (ENSMZEG00005014517)	DNAJC6 (ENSMZEG00005014454)	ak4 (ENSMZEG00005014435)	jak1 (ENSMZEG00005014405)	RAVER2 (ENSMZEG00005014386)	CACHD1 (ENSMZEG00005014345)	ENSMZEG00005014314	ENSMZEG00005014304	ENSMZEG00005014297	enkur (ENSMZEG00005014290)	ROR1 (ENSMZEG00005014280)	ENSMZEG00005014273	ENSMZEG00005014264	NXPE3 (ENSMZEG00005014252)	ENSMZEG00005014241
Eastern happy	MODERN SPECIES	8	ENSACLG00000002578	ANO4 (ENSACLG00000002503)	NXPE3 (ENSACLG00000002491)	ENSACLG00000002484	ccl25b (ENSACLG00000002474)	ENSACLG00000002469	ENSACLG00000002468	ccl25b (ENSACLG00000002259)	ENSACLG00000002234	ENSACLG00000002218	ENSACLG00000002207	ENSACLG00000002180	ENSACLG00000002167	ENSACLG00000002111	TTC22 (ENSACLG00000002093)	lurap1 (ENSACLG00000002086) #22	lepr (ENSACLG00000002030)	DNAJC6 (ENSACLG00000001981)	ak4 (ENSACLG00000001952)	jak1 (ENSACLG00000001880)	RAVER2 (ENSACLG00000001840)	CACHD1 (ENSACLG00000001723)	ENSACLG00000001704	ROR1 (ENSACLG00000001650)	ENSACLG00000001611	pgm1 (ENSACLG00000001599)	efcab7 (ENSACLG00000001579)	ENSACLG00000001570	alg6 (ENSACLG00000001523)	foxd3 (ENSACLG00000001505)	ENSACLG00000001479
Burton s mouthbrooder	MODERN SPECIES	709													ccl25b (ENSHBUG00000023336)	ENSHBUG00000023316	ENSHBUG00000023293	lurap1 (ENSHBUG00000023282) #22	lepr (ENSHBUG00000023259)	DNAJC6 (ENSHBUG00000023221)	ak4 (ENSHBUG00000023100)	jak1 (ENSHBUG00000023087)	RAVER2 (ENSHBUG00000022983)	CACHD1 (ENSHBUG00000022964)
Lyretail cichlid	MODERN SPECIES	504										ccl25b (ENSNBRG00000014729)	ENSNBRG00000014715	ENSNBRG00000014706	ENSNBRG00000014673	ENSNBRG00000014651	ENSNBRG00000014623	lurap1 (ENSNBRG00000014600) #22	lepr (ENSNBRG00000014553)	DNAJC6 (ENSNBRG00000014494)	ak4 (ENSNBRG00000014458)	jak1 (ENSNBRG00000014392)	ENSNBRG00000014366	ENSNBRG00000014345	CACHD1 (ENSNBRG00000014295)	ROR1 (ENSNBRG00000014260)	pgm1 (ENSNBRG00000014219)
Midas cichlid	MODERN SPECIES	314											ENSACIG00000012564	ENSACIG00000012551	ENSACIG00000012532	ENSACIG00000012512	TTC22 (ENSACIG00000012477)	lurap1 (ENSACIG00000012456) #22	lepr (ENSACIG00000012411)	DNAJC6 (ENSACIG00000012354)	ak4 (ENSACIG00000012335)	jak1 (ENSACIG00000012257)	ENSACIG00000012240	ENSACIG00000012229	CACHD1 (ENSACIG00000012163)	ROR1 (ENSACIG00000012131)	pgm1 (ENSACIG00000011996)	efcab7 (ENSACIG00000011953)	alg6 (ENSACIG00000011891)	foxd3 (ENSACIG00000011882)	atg4c (ENSACIG00000011861)	angptl3 (ENSACIG00000011832)	DOCK7 (ENSACIG00000011717)
Pomacentridae	ANCESTRAL SPECIES	16	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a.d	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.r	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243
Bicolor damselfish	MODERN SPECIES	1339														ENSSPAG00000015453	TTC22 (ENSSPAG00000015409)	lurap1 (ENSSPAG00000015392) #22	lepr (ENSSPAG00000015290)	DNAJC6 (ENSSPAG00000015216)	ak4 (ENSSPAG00000015181)	jak1 (ENSSPAG00000015004)
Pomacentridae_A	ANCESTRAL SPECIES		ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a.d	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.r	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a.e	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000155661	ENSGT00940000156746.a	ENSGT00910000144243
Amphiprion	ANCESTRAL SPECIES	2	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a.d	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a.r	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00940000155356.d.b.a.a.a.a.a.a.a.b.a.b.a.a	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a.e	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243
Orange clownfish	MODERN SPECIES	11	ENSAPEG00000009363	ENSAPEG00000009439	ivns1abpa (ENSAPEG00000009551)	ENSAPEG00000009613	anos1b (ENSAPEG00000009636)	senp5 (ENSAPEG00000009683)	PDE4B (ENSAPEG00000009737)	SGIP1 (ENSAPEG00000009815)	ENSAPEG00000010001	pars2 (ENSAPEG00000010009)	ttc4 (ENSAPEG00000010035)	ENSAPEG00000010046	ENSAPEG00000010081	ENSAPEG00000010150	TTC22 (ENSAPEG00000010414)	lurap1 (ENSAPEG00000010457) #22	lepr (ENSAPEG00000010492)	DNAJC6 (ENSAPEG00000010577)	ak4 (ENSAPEG00000010665)	jak1 (ENSAPEG00000010718)	ENSAPEG00000010823	ENSAPEG00000010843	CACHD1 (ENSAPEG00000010866)	ROR1 (ENSAPEG00000011000)	pgm1 (ENSAPEG00000011051)	efcab7 (ENSAPEG00000011064)	alg6 (ENSAPEG00000011082)	foxd3 (ENSAPEG00000011219)	atg4c (ENSAPEG00000011253)	DOCK7 (ENSAPEG00000011337)	angptl3 (ENSAPEG00000011504)
Clown anemonefish	MODERN SPECIES	2121																lurap1 (ENSAOCG00000005818) #22	lepr (ENSAOCG00000005789)	DNAJC6 (ENSAOCG00000005735)	ak4 (ENSAOCG00000005716)	jak1 (ENSAOCG00000005676)
Spiny chromis	MODERN SPECIES	1635										ENSAPOG00000016525	pars2 (ENSAPOG00000016537)	ttc4 (ENSAPOG00000016553)	ENSAPOG00000016579	ENSAPOG00000016602	TTC22 (ENSAPOG00000016628)	lurap1 (ENSAPOG00000016645) #22	ENSAPOG00000016737
Percomorphaceae_C	ANCESTRAL SPECIES	8	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Eupercaria	ANCESTRAL SPECIES	8	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Eupecaria_A	ANCESTRAL SPECIES	11	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648.l	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Ballan wrasse	MODERN SPECIES	455						SGIP1 (ENSLBEG00000005662)	insl5a (ENSLBEG00000005826)	pars2 (ENSLBEG00000005842)	ttc4 (ENSLBEG00000005881)	ENSLBEG00000005915	ENSLBEG00000005938	ENSLBEG00000005965	ENSLBEG00000006000	ENSLBEG00000006028	TTC22 (ENSLBEG00000006059)	lurap1 (ENSLBEG00000006084) #22	lepr (ENSLBEG00000006119)	DNAJC6 (ENSLBEG00000006219)	ak4 (ENSLBEG00000006419)	jak1 (ENSLBEG00000006464)
Eupecaria_B	ANCESTRAL SPECIES	10	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648.l	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Perciformes	ANCESTRAL SPECIES	8	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648.l	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Cottioidei	ANCESTRAL SPECIES	5	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648.l	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243
Lumpfish	MODERN SPECIES	19	arpc5b (ENSCLMG00005016384)	ENSCLMG00005016382	ENSCLMG00005016379	ivns1abpa (ENSCLMG00005016228)	ENSCLMG00005016212	anos1b (ENSCLMG00005016185)	senp5 (ENSCLMG00005016182)	PDE4B (ENSCLMG00005015973)	SGIP1 (ENSCLMG00005015970)	ENSCLMG00005015969	pars2 (ENSCLMG00005015968)	ttc4 (ENSCLMG00005015967)	ENSCLMG00005015965	ENSCLMG00005015964	TTC22 (ENSCLMG00005015962)	lurap1 (ENSCLMG00005015960) #22	lepr (ENSCLMG00005015938)	DNAJC6 (ENSCLMG00005015480)	ak4 (ENSCLMG00005015473)	jak1 (ENSCLMG00005015131)	ENSCLMG00005015109	CACHD1 (ENSCLMG00005014999)	ROR1 (ENSCLMG00005014994)	efcab7 (ENSCLMG00005014993)	pgm1 (ENSCLMG00005014936)	alg6 (ENSCLMG00005014922)	foxd3 (ENSCLMG00005014921)	atg4c (ENSCLMG00005014832)	angptl3 (ENSCLMG00005014829)	DOCK7 (ENSCLMG00005013341)	usp1 (ENSCLMG00005013306)
Perciformes_a	ANCESTRAL SPECIES	6	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000159865	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648.l	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Channel bull blenny	MODERN SPECIES	18	ivns1abpa (ENSCGOG00000000383)	ENSCGOG00000000343	anos1b (ENSCGOG00000000337)	ENSCGOG00000000331	ENSCGOG00000000325	PDE4B (ENSCGOG00000000318)	SGIP1 (ENSCGOG00000000313)	ENSCGOG00000000311	pars2 (ENSCGOG00000000310)	ttc4 (ENSCGOG00000000307)	ENSCGOG00000000304	ENSCGOG00000000303	ENSCGOG00000000302	ENSCGOG00000000301	TTC22 (ENSCGOG00000000300)	lurap1 (ENSCGOG00000000298) #22	lepr (ENSCGOG00000000237)	ENSCGOG00000000071	DNAJC6 (ENSCGOG00000023168)	ak4 (ENSCGOG00000023162)	jak1 (ENSCGOG00000021992)	RAVER2 (ENSCGOG00000021927)	CACHD1 (ENSCGOG00000021855)	ROR1 (ENSCGOG00000021842)	pgm1 (ENSCGOG00000021634)	efcab7 (ENSCGOG00000021628)	alg6 (ENSCGOG00000021549)	foxd3 (ENSCGOG00000021545)	atg4c (ENSCGOG00000021507)	angptl3 (ENSCGOG00000021500)	DOCK7 (ENSCGOG00000019797)
Pike perch	MODERN SPECIES	61	ENSSLUG00000011629	ENSSLUG00000011636	ENSSLUG00000011641	ENSSLUG00000009993	PDE4B (ENSSLUG00000010055)	SGIP1 (ENSSLUG00000011572)	ENSSLUG00000011584	pars2 (ENSSLUG00000011590)	ttc4 (ENSSLUG00000011602)	ENSSLUG00000011622	ENSSLUG00000011624	ENSSLUG00000011638	ENSSLUG00000011662	ENSSLUG00000011681	TTC22 (ENSSLUG00000011687)	lurap1 (ENSSLUG00000011692) #22	lepr (ENSSLUG00000011748)	DNAJC6 (ENSSLUG00000013233)	ENSSLUG00000013246	ak4 (ENSSLUG00000013248)	jak1 (ENSSLUG00000013395)	ENSSLUG00000018425	ENSSLUG00000018432	CACHD1 (ENSSLUG00000018445)	ROR1 (ENSSLUG00000018507)	efcab7 (ENSSLUG00000018528)	alg6 (ENSSLUG00000018596)	foxd3 (ENSSLUG00000018614)	atg4c (ENSSLUG00000018617)	DOCK7 (ENSSLUG00000018937)	angptl3 (ENSSLUG00000022156)
Eupecaria_C	ANCESTRAL SPECIES	4	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000159865.j	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000154396.b.b.a	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648.l	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000155661	ENSGT00940000156746.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	3	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000159865.j	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000154396.b.b.a	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648.l	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
European seabass	MODERN SPECIES	17	PLA2G4A (ENSDLAG00005025706)	arpc5b (ENSDLAG00005033907)	HMCN1 (ENSDLAG00005028325)	ivns1abpa (ENSDLAG00005025680)	ENSDLAG00005025676	ENSDLAG00005025675	ENSDLAG00005025673	PDE4B (ENSDLAG00005025655)	ENSDLAG00005025650	ENSDLAG00005025643	insl5a (ENSDLAG00005025637)	pars2 (ENSDLAG00005033834)	ENSDLAG00005025607	ENSDLAG00005027686	ENSDLAG00005025606	lurap1 (ENSDLAG00005032468) #22	lepr (ENSDLAG00005025384)	ENSDLAG00005025356	DNAJC6 (ENSDLAG00005025352)	ak4 (ENSDLAG00005025351)	jak1 (ENSDLAG00005025117)	RAVER2 (ENSDLAG00005025087)	CACHD1 (ENSDLAG00005025014)	ROR1 (ENSDLAG00005024991)	efcab7 (ENSDLAG00005024938)	alg6 (ENSDLAG00005024933)	foxd3 (ENSDLAG00005029908)	atg4c (ENSDLAG00005024924)	angptl3 (ENSDLAG00005024920)	DOCK7 (ENSDLAG00005021872)	usp1 (ENSDLAG00005021691)
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005020756	arpc5b (ENSLCRG00005020758)	ivns1abpa (ENSLCRG00005000863)	ENSLCRG00005000892	anos1b (ENSLCRG00005000904)	ENSLCRG00005000911	PDE4B (ENSLCRG00005000943)	SGIP1 (ENSLCRG00005001965)	insl5a (ENSLCRG00005002006)	pars2 (ENSLCRG00005002011)	ttc4 (ENSLCRG00005002021)	ENSLCRG00005002037	ENSLCRG00005002043	ENSLCRG00005002076	TTC22 (ENSLCRG00005002092)	lurap1 (ENSLCRG00005002102) #22	lepr (ENSLCRG00005002140)	DNAJC6 (ENSLCRG00005005100)	ENSLCRG00005005101	ak4 (ENSLCRG00005005102)	jak1 (ENSLCRG00005005113)	RAVER2 (ENSLCRG00005005602)	CACHD1 (ENSLCRG00005005618)	ROR1 (ENSLCRG00005006204)	pgm1 (ENSLCRG00005006214)	efcab7 (ENSLCRG00005006380)	alg6 (ENSLCRG00005006529)	foxd3 (ENSLCRG00005006532)	atg4c (ENSLCRG00005006533)	DOCK7 (ENSLCRG00005006553)	angptl3 (ENSLCRG00005009138)
Gilthead seabream	MODERN SPECIES	2	PLA2G4A (ENSSAUG00010014156)	arpc5b (ENSSAUG00010014121)	HMCN1 (ENSSAUG00010013809)	ivns1abpa (ENSSAUG00010013758)	ENSSAUG00010013754	anos1b (ENSSAUG00010013743)	ENSSAUG00010013740	PDE4B (ENSSAUG00010013697)	SGIP1 (ENSSAUG00010012331)	insl5a (ENSSAUG00010012304)	pars2 (ENSSAUG00010012303)	ttc4 (ENSSAUG00010012298)	ENSSAUG00010012294	ENSSAUG00010012291	TTC22 (ENSSAUG00010012288)	lurap1 (ENSSAUG00010012286) #22	ENSSAUG00010011856	ENSSAUG00010011843	ENSSAUG00010011842	ENSSAUG00010011840	ENSSAUG00010011839	r3hdm4 (ENSSAUG00010011830)	ABCA7 (ENSSAUG00010011007)	APBA3 (ENSSAUG00010010954)	pex11g (ENSSAUG00010010953)	ENSSAUG00010010952	ENSSAUG00010010950	ENSSAUG00010010948	slc35e1 (ENSSAUG00010010946)	MED26 (ENSSAUG00010010945)	smim7 (ENSSAUG00010010944)
Tetraodontidae	ANCESTRAL SPECIES	5	ENSGT00390000010743.a.a	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000154396.b.b.a	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00960000186686	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000155661	ENSGT00940000156746.a
Fugu	MODERN SPECIES	12	pdcb (ENSTRUG00000004109)	ptgs2b (ENSTRUG00000004240)	PLA2G4A (ENSTRUG00000004829)	ARPC5 (ENSTRUG00000032458)	ENSTRUG00000006420	ivns1abpa (ENSTRUG00000006013)	anos1b (ENSTRUG00000006504)	ENSTRUG00000006795	PDE4B (ENSTRUG00000018562)	SGIP1 (ENSTRUG00000018561)	insl5a (ENSTRUG00000032631)	pars2 (ENSTRUG00000018560)	ENSTRUG00000025652	ENSTRUG00000025886	TTC22 (ENSTRUG00000018557)	lurap1 (ENSTRUG00000026447) #22	lepr (ENSTRUG00000018553)	DNAJC6 (ENSTRUG00000018550)	ENSTRUG00000022954	ak4 (ENSTRUG00000023333)	jak1 (ENSTRUG00000018544)	RAVER2 (ENSTRUG00000018541)	CACHD1 (ENSTRUG00000018536)	ROR1 (ENSTRUG00000003110)	efcab7 (ENSTRUG00000018532)	alg6 (ENSTRUG00000018524)	foxd3 (ENSTRUG00000018523)	atg4c (ENSTRUG00000018516)	DOCK7 (ENSTRUG00000018504)	angptl3 (ENSTRUG00000018512)	usp1 (ENSTRUG00000018500)
Tetraodon	MODERN SPECIES		pdcb (ENSTNIG00000018123)	tprb (ENSTNIG00000018122)	prg4b (ENSTNIG00000018121)	ENSTNIG00000018120	ivns1abpa (ENSTNIG00000018119)	ENSTNIG00000018118	anos1b (ENSTNIG00000018117)	ENSTNIG00000018116	PDE4B (ENSTNIG00000018115)	SGIP1 (ENSTNIG00000018114)	insl5a (ENSTNIG00000000230)	pars2 (ENSTNIG00000018113)	ttc4 (ENSTNIG00000018112)	ENSTNIG00000000173	TTC22 (ENSTNIG00000018111)	lurap1 (ENSTNIG00000018110) #22	lepr (ENSTNIG00000001810)	DNAJC6 (ENSTNIG00000018109)	ak4 (ENSTNIG00000018108)	jak1 (ENSTNIG00000018107)	RAVER2 (ENSTNIG00000018106)	ROR1 (ENSTNIG00000018105)	pgm1 (ENSTNIG00000018104)	efcab7 (ENSTNIG00000018103)	ENSTNIG00000018102	alg6 (ENSTNIG00000018101)	foxd3 (ENSTNIG00000018100)	atg4c (ENSTNIG00000018099)	DOCK7 (ENSTNIG00000018098)	usp1 (ENSTNIG00000018097)	KANK4 (ENSTNIG00000018096)
Percomorphaceae_D	ANCESTRAL SPECIES	8	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Anabantaria	ANCESTRAL SPECIES	7	ENSGT00390000010743.a.a	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243	ENSGT00940000158468.a.b
Zig-zag eel	MODERN SPECIES	18	pdcb (ENSMAMG00000008199)	ptgs2b (ENSMAMG00000008217)	PLA2G4A (ENSMAMG00000008256)	arpc5b (ENSMAMG00000027530)	ENSMAMG00000008367	ivns1abpa (ENSMAMG00000008599)	ENSMAMG00000027719	ENSMAMG00000008644	ENSMAMG00000008671	ENSMAMG00000008712	ENSMAMG00000008755	ENSMAMG00000008829	pars2 (ENSMAMG00000008847)	ENSMAMG00000028734	ENSMAMG00000028113	lurap1 (ENSMAMG00000008928) #22	ENSMAMG00000008909	lepr (ENSMAMG00000008942)	DNAJC6 (ENSMAMG00000008975)	ak4 (ENSMAMG00000008991)	jak1 (ENSMAMG00000009020)	ENSMAMG00000027617	ENSMAMG00000009059	ENSMAMG00000026466	CACHD1 (ENSMAMG00000009078)	ROR1 (ENSMAMG00000009136)	efcab7 (ENSMAMG00000009169)	alg6 (ENSMAMG00000009216)	foxd3 (ENSMAMG00000009229)	atg4c (ENSMAMG00000009246)	angptl3 (ENSMAMG00000009397)
Anabantoidei	ANCESTRAL SPECIES	6	ENSGT00390000010743.a.a	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661	ENSGT00910000144243	ENSGT00940000158468.a.b
Climbing perch	MODERN SPECIES	17	ENSATEG00000029942	ENSATEG00000019054	ENSATEG00000019254	ENSATEG00000025634	pars2 (ENSATEG00000019166)	ttc4 (ENSATEG00000019187)	ENSATEG00000019221	ENSATEG00000019246	ENSATEG00000019125	ENSATEG00000025194	ttc4 (ENSATEG00000019340)	ENSATEG00000029474	ENSATEG00000025420	ENSATEG00000019391	ENSATEG00000019408	lurap1 (ENSATEG00000028563) #22	lepr (ENSATEG00000019438)	DNAJC6 (ENSATEG00000019494)	ak4 (ENSATEG00000019585)	jak1 (ENSATEG00000019610)	RAVER2 (ENSATEG00000019679)	CACHD1 (ENSATEG00000019771)	ROR1 (ENSATEG00000019870)	efcab7 (ENSATEG00000019920)	alg6 (ENSATEG00000019947)	foxd3 (ENSATEG00000019995)	atg4c (ENSATEG00000020019)	DOCK7 (ENSATEG00000020135)	angptl3 (ENSATEG00000020322)	usp1 (ENSATEG00000020340)	ENSATEG00000020371
Siamese fighting fish	MODERN SPECIES	15	ENSBSLG00000021063	ivns1abpa (ENSBSLG00000020495)	ENSBSLG00000020490	anos1b (ENSBSLG00000020466)	ENSBSLG00000020461	ENSBSLG00000020453	ENSBSLG00000020448	PDE4B (ENSBSLG00000020398)	SGIP1 (ENSBSLG00000020367)	ENSBSLG00000020360	pars2 (ENSBSLG00000020357)	ttc4 (ENSBSLG00000020328)	ENSBSLG00000020324	ENSBSLG00000020309	TTC22 (ENSBSLG00000020303)	lurap1 (ENSBSLG00000020302) #22	lepr (ENSBSLG00000020123)	DNAJC6 (ENSBSLG00000020088)	ak4 (ENSBSLG00000020075)	jak1 (ENSBSLG00000019279)	RAVER2 (ENSBSLG00000019210)	CACHD1 (ENSBSLG00000018891)	ROR1 (ENSBSLG00000018768)	efcab7 (ENSBSLG00000018489)	alg6 (ENSBSLG00000018410)	foxd3 (ENSBSLG00000018400)	atg4c (ENSBSLG00000018355)	angptl3 (ENSBSLG00000018338)	DOCK7 (ENSBSLG00000011128)	usp1 (ENSBSLG00000010617)	ENSBSLG00000010124
Carangaria	ANCESTRAL SPECIES	7	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Pleuronectoidei	ANCESTRAL SPECIES	20	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661.eb
Turbot	MODERN SPECIES	3	arpc5b (ENSSMAG00000020781)	HMCN1 (ENSSMAG00000020769)	ivns1abpa (ENSSMAG00000020763)	ENSSMAG00000020759	ENSSMAG00000020761	ENSSMAG00000020753	ENSSMAG00000020750	ENSSMAG00000020743	ENSSMAG00000020717	ENSSMAG00000035198	pars2 (ENSSMAG00000020710)	ttc4 (ENSSMAG00000020701)	ENSSMAG00000024338	ENSSMAG00000020700	ENSSMAG00000020697	lurap1 (ENSSMAG00000020696) #22	lepr (ENSSMAG00000020687)	ENSSMAG00000020685	DNAJC6 (ENSSMAG00000020667)	ak4 (ENSSMAG00000020666)	jak1 (ENSSMAG00000020659)	RAVER2 (ENSSMAG00000031863)	CACHD1 (ENSSMAG00000020646)	ROR1 (ENSSMAG00000020638)	efcab7 (ENSSMAG00000020635)	alg6 (ENSSMAG00000020629)	foxd3 (ENSSMAG00000020628)	atg4c (ENSSMAG00000020625)	angptl3 (ENSSMAG00000020623)	DOCK7 (ENSSMAG00000020614)	usp1 (ENSSMAG00000020612)
Tongue sole	MODERN SPECIES	11	PLA2G4A (ENSCSEG00000017191)	arpc5b (ENSCSEG00000017223)	HMCN1 (ENSCSEG00000017242)	ivns1abpa (ENSCSEG00000017339)	ENSCSEG00000017352	anos1b (ENSCSEG00000017368)	ENSCSEG00000017386	PDE4B (ENSCSEG00000017412)	SGIP1 (ENSCSEG00000017476)	ENSCSEG00000017542	pars2 (ENSCSEG00000017559)	ttc4 (ENSCSEG00000017569)	ENSCSEG00000017620	ENSCSEG00000017630	TTC22 (ENSCSEG00000017664)	lurap1 (ENSCSEG00000017682) #22	lepr (ENSCSEG00000017688)	DNAJC6 (ENSCSEG00000017751)	ENSCSEG00000017774	ak4 (ENSCSEG00000017778)	jak1 (ENSCSEG00000017797)	RAVER2 (ENSCSEG00000017839)	CACHD1 (ENSCSEG00000017866)	ROR1 (ENSCSEG00000017917)	pgm1 (ENSCSEG00000017937)	efcab7 (ENSCSEG00000017946)	alg6 (ENSCSEG00000017962)	foxd3 (ENSCSEG00000017971)	atg4c (ENSCSEG00000017978)	ENSCSEG00000018001	angptl3 (ENSCSEG00000018084)
Carangaria_A	ANCESTRAL SPECIES	3	ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000156309.A.l	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Seriola	ANCESTRAL SPECIES		ENSGT01030000234606.b.e.b	ENSGT00940000154654.a.b	ENSGT00940000154614	ENSGT00940000155635	ENSGT00390000001254	ENSGT00440000033720.b	ENSGT00940000159865	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371	ENSGT00940000163701.b.a.a.a.b.c.a	ENSGT00940000163701.b.a.a.a.b.c.b	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00730000111209	ENSGT00960000186686	ENSGT00940000158755	ENSGT00940000154568	ENSGT00940000157092	ENSGT00940000158648	ENSGT00940000157568	ENSGT00940000153947.B	ENSGT00940000155542.a	ENSGT00390000015466	ENSGT00940000153733.B	ENSGT00940000161645.b	ENSGT00530000063000.a.a.a	ENSGT00940000156746.a	ENSGT00940000155661
Greater amberjack	MODERN SPECIES		PLA2G4A (ENSSDUG00000011954)	arpc5b (ENSSDUG00000012029)	HMCN1 (ENSSDUG00000012070)	ivns1abpa (ENSSDUG00000012273)	ENSSDUG00000012345	ENSSDUG00000012376	ENSSDUG00000012406	PDE4B (ENSSDUG00000012442)	SGIP1 (ENSSDUG00000012569)	ENSSDUG00000012612	pars2 (ENSSDUG00000012630)	ttc4 (ENSSDUG00000012666)	ENSSDUG00000012675	ENSSDUG00000012696	TTC22 (ENSSDUG00000012776)	lurap1 (ENSSDUG00000012795) #22	lepr (ENSSDUG00000012805)	DNAJC6 (ENSSDUG00000012843)	ak4 (ENSSDUG00000012973)	jak1 (ENSSDUG00000013009)	RAVER2 (ENSSDUG00000013065)	CACHD1 (ENSSDUG00000013103)	ROR1 (ENSSDUG00000013244)	pgm1 (ENSSDUG00000013333)	efcab7 (ENSSDUG00000013363)	alg6 (ENSSDUG00000013498)	foxd3 (ENSSDUG00000013552)	atg4c (ENSSDUG00000013562)	DOCK7 (ENSSDUG00000013589)	angptl3 (ENSSDUG00000013655)	ENSSDUG00000013685
Yellowtail amberjack	MODERN SPECIES	3236	ptgs2b (ENSSLDG00000004537)	PLA2G4A (ENSSLDG00000004424)	arpc5b (ENSSLDG00000004389)	ENSSLDG00000003997	ivns1abpa (ENSSLDG00000003871)	ENSSLDG00000003821	anos1b (ENSSLDG00000003777)	ENSSLDG00000003734	PDE4B (ENSSLDG00000003622)	SGIP1 (ENSSLDG00000003534)	ENSSLDG00000003514	pars2 (ENSSLDG00000003353)	ttc4 (ENSSLDG00000003275)	ENSSLDG00000003247	TTC22 (ENSSLDG00000003209)	lurap1 (ENSSLDG00000003182) #22	lepr (ENSSLDG00000003111)	ENSSLDG00000003081	DNAJC6 (ENSSLDG00000002957)	ak4 (ENSSLDG00000002905)	jak1 (ENSSLDG00000002783)	RAVER2 (ENSSLDG00000002746)	CACHD1 (ENSSLDG00000002572)	ROR1 (ENSSLDG00000002496)	pgm1 (ENSSLDG00000002424)	efcab7 (ENSSLDG00000002393)	alg6 (ENSSLDG00000002370)	foxd3 (ENSSLDG00000002349)	atg4c (ENSSLDG00000002291)	angptl3 (ENSSLDG00000002276)	DOCK7 (ENSSLDG00000001963)
Barramundi perch	MODERN SPECIES	22	arpc5b (ENSLCAG00010009074)	HMCN1 (ENSLCAG00010009084)	ivns1abpa (ENSLCAG00010009110)	anos1b (ENSLCAG00010009167)	ENSLCAG00010009179	PDE4B (ENSLCAG00010009202)	SGIP1 (ENSLCAG00010009243)	ENSLCAG00010009264	pars2 (ENSLCAG00010009267)	ttc4 (ENSLCAG00010009272)	ENSLCAG00010009281	ENSLCAG00010009285	ENSLCAG00010009286	ENSLCAG00010009290	TTC22 (ENSLCAG00010009297)	lurap1 (ENSLCAG00010009302) #22	lepr (ENSLCAG00010009352)	DNAJC6 (ENSLCAG00010009667)	ENSLCAG00010009673	ak4 (ENSLCAG00010009676)	jak1 (ENSLCAG00010009784)	RAVER2 (ENSLCAG00010010263)	CACHD1 (ENSLCAG00010010274)	ROR1 (ENSLCAG00010010349)	pgm1 (ENSLCAG00010010380)	alg6 (ENSLCAG00010010452)	foxd3 (ENSLCAG00010010455)	atg4c (ENSLCAG00010010458)	DOCK7 (ENSLCAG00010010587)	angptl3 (ENSLCAG00010011090)	tent5bb (ENSLCAG00010011092)
Pinecone sodierfish	MODERN SPECIES	18	lhx9 (ENSMMDG00005009371)	si:dkey-121a9.3 (ENSMMDG00005009382)	DENND1B (ENSMMDG00005009392)	ENSMMDG00005009397	crb1 (ENSMMDG00005009401)	anos1b (ENSMMDG00005009406)	senp5 (ENSMMDG00005009455)	PDE4B (ENSMMDG00005009518)	SGIP1 (ENSMMDG00005013859)	ENSMMDG00005014139	dnai4 (ENSMMDG00005014145)	pars2 (ENSMMDG00005014267)	ttc4 (ENSMMDG00005014269)	ENSMMDG00005014306	TTC22 (ENSMMDG00005014309)	lurap1 (ENSMMDG00005014312) #22	lepr (ENSMMDG00005014378)	DNAJC6 (ENSMMDG00005016903)	ak4 (ENSMMDG00005017810)	jak1 (ENSMMDG00005017951)	RAVER2 (ENSMMDG00005021327)	CACHD1 (ENSMMDG00005021338)	ROR1 (ENSMMDG00005021361)	efcab7 (ENSMMDG00005021377)	alg6 (ENSMMDG00005021405)	foxd3 (ENSMMDG00005021408)	atg4c (ENSMMDG00005021412)	DOCK7 (ENSMMDG00005021534)	angptl3 (ENSMMDG00005022893)	usp1 (ENSMMDG00005022894)	ENSMMDG00005022895
Cod	MODERN SPECIES	3	ptprfa (ENSGMOG00000004387)	ENSGMOG00000008959	ENSGMOG00000032565	rad54l (ENSGMOG00000014568) #23	ENSGMOG00000023868 #24	TTR (ENSGMOG00000014623)	ENSGMOG00000014725	ENSGMOG00000013943	ENSGMOG00000013991	ENSGMOG00000034580	ENSGMOG00000035189	CDH2 (ENSGMOG00000005391)	ENSGMOG00000036789	ENSGMOG00000009412	ENSGMOG00000027721	ENSGMOG00000034626 #22	ENSGMOG00000029026	ENSGMOG00000025976	ENSGMOG00000025062	ENSGMOG00000034635	ENSGMOG00000007077	ENSGMOG00000033620	ENSGMOG00000007057	ENSGMOG00000007046	si:ch211-198n5.11 (ENSGMOG00000007037)	ENSGMOG00000007026	depdc1a (ENSGMOG00000007008)	aspm (ENSGMOG00000036993)	ENSGMOG00000034477	ENSGMOG00000032511	ENSGMOG00000023090
Protacanthopterygii	ANCESTRAL SPECIES	30	ENSGT00940000158648	ENSGT00940000157092	ENSGT00940000154568	ENSGT00940000158755	ENSGT00730000111209	ENSGT00390000018600	ENSGT01060000248530.C.d	ENSGT00940000155190.bb.a	ENSGT00940000156301.a.a	ENSGT00940000174981	ENSGT00940000154396.b.b.a	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.a #22	ENSGT00940000163583	ENSGT00390000017201	ENSGT00940000155151.b.d	ENSGT00940000157892	ENSGT00390000017398	ENSGT00990000211775	ENSGT01030000234635.a.a.a.a	ENSGT00940000156924	ENSGT00950000183036.a.a.g	ENSGT00940000154667.b.a	ENSGT00940000157607	ENSGT00390000004674.i.b	ENSGT00940000157064.a.b.b.a.a	ENSGT00390000004798	ENSGT00940000156132.h
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	576															ENSGT00510000049371.m	ENSGT00530000063790.a.a.c #22	ENSGT00940000163583.y.a	ENSGT00940000155151.b.d.f	ENSGT00940000157892.n	ENSGT00390000017398.z	ENSGT00990000211775	ENSGT01030000234635.a.a.a.a.e	ENSGT00940000154667.b.a.e	ENSGT00940000157607.k.a	ENSGT00940000157607.l	ENSGT00390000004674.i.b	ENSGT00940000167241	ENSGT00390000016650.c.a.c #10	ENSGT00940000156539.x #7	ENSGT01020000230412.A.c.b.c.a.c	ENSGT00390000003156.b.e
Salmoninae_a	ANCESTRAL SPECIES	46	ENSGT00940000153733.B.i	ENSGT00390000015466	ENSGT00940000155542.a.d	ENSGT00940000153947.B.i.b	ENSGT00940000157568.g.a	ENSGT00940000158648.h	ENSGT00940000157092.v.a.b	ENSGT00940000154568.ib	ENSGT00940000158755.j	ENSGT00730000111209.r	ENSGT00940000155190.bb.a.h	ENSGT00940000156301.a.a.c.a	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371.m	ENSGT00530000063790.a.a.c #22	ENSGT00940000163583.y.a	ENSGT00940000155151.b.d.f	ENSGT00940000157892.n	ENSGT00390000017398.z	ENSGT00990000211775	ENSGT01030000234635.a.a.a.a.e	ENSGT00940000154667.b.a.e	ENSGT00940000157607.l	ENSGT00390000004674.i.b	ENSGT00940000167241	ENSGT00390000016650.c.a.c #10	ENSGT00940000156539.x #7	ENSGT01020000230412.A.c.b.c.a.c	ENSGT00390000003156.b.e	ENSGT00940000154327.b.f.d
Salmo	ANCESTRAL SPECIES	20	ENSGT00940000153733.B.i	ENSGT00390000015466	ENSGT00940000155542.a.d	ENSGT00940000153947.B.i.b	ENSGT00940000157568.g.a	ENSGT00940000158648.h	ENSGT00940000157092.v.a.b	ENSGT00940000154568.ib	ENSGT00940000158755.j	ENSGT00730000111209.r	ENSGT00940000155190.bb.a.h	ENSGT00940000156301.a.a.c.a	ENSGT00940000156209	ENSGT00390000010922	ENSGT00510000049371.m	ENSGT00530000063790.a.a.c #22	ENSGT00940000163583.y.a	ENSGT00940000155151.b.d.f	ENSGT00940000157892.n	ENSGT00390000017398.z	ENSGT01030000234635.a.a.a.a.e	ENSGT00940000154667.b.a.e	ENSGT00940000157607.l	ENSGT00390000004674.i.b	ENSGT00940000167241	ENSGT00390000016650.c.a.c #10	ENSGT00940000156539.x #7	ENSGT01020000230412.A.c.b.c.a.c	ENSGT00390000003156.b.e	ENSGT00940000154327.b.f.d	ENSGT00940000160740.f
River trout	MODERN SPECIES	33	alg6 (ENSSTUG00000013500)	ENSSTUG00000013545	pgm1 (ENSSTUG00000013568)	ROR1 (ENSSTUG00000013865)	CACHD1 (ENSSTUG00000014041)	RAVER2 (ENSSTUG00000014126)	jak1 (ENSSTUG00000014197)	ak4 (ENSSTUG00000014575)	DNAJC6 (ENSSTUG00000014598)	lepr (ENSSTUG00000014647)	PDE4B (ENSSTUG00000014883)	SGIP1 (ENSSTUG00000015115)	ENSSTUG00000015164	ENSSTUG00000015172	ttc4 (ENSSTUG00000015182)	lurap1 (ENSSTUG00000015246) #22	ENSSTUG00000015254	ENSSTUG00000015287	ccn1 (ENSSTUG00000015301)	DDAH1 (ENSSTUG00000015326)	zgc:65873 (ENSSTUG00000015342)	ENSSTUG00000015355	ENSSTUG00000015363	ENSSTUG00000015410	ENSSTUG00000015424	FNDC7 (ENSSTUG00000015443)	ENSSTUG00000015506	nasp (ENSSTUG00000015527) #10	akr1a1b (ENSSTUG00000015577) #7	uck2a (ENSSTUG00000015820)	magoh (ENSSTUG00000015891)
Atlantic salmon	MODERN SPECIES	15	pgm1 (ENSSSAG00000081050)	ROR1 (ENSSSAG00000081058)	CACHD1 (ENSSSAG00000081067)	RAVER2 (ENSSSAG00000081083)	jak1 (ENSSSAG00000081097)	ak4 (ENSSSAG00000063104)	DNAJC6 (ENSSSAG00000081120)	ENSSSAG00000096443	lepr2 (ENSSSAG00000081132)	PDE4B (ENSSSAG00000055457)	SGIP1 (ENSSSAG00000081219)	insl5a (ENSSSAG00000081225)	ENSSSAG00000116821	ENSSSAG00000121704	pars2 (ENSSSAG00000054727)	lurap1 (ENSSSAG00000008690) #22	ENSSSAG00000008705	ENSSSAG00000100007	cef10 (ENSSSAG00000008740)	DDAH1 (ENSSSAG00000008768)	C1orf52 (ENSSSAG00000119602)	SYDE2 (ENSSSAG00000008799)	ENSSSAG00000008827	ENSSSAG00000008944	ENSSSAG00000009023	ENSSSAG00000009055	ENSSSAG00000009085 #10	AK1A1 (ENSSSAG00000009168) #7	ENSSSAG00000009560	ENSSSAG00000009680	ENSSSAG00000096548
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000153733.B.j	ENSGT00940000155542.a.c	ENSGT00940000153947.B.i.a	ENSGT00940000157568.g.b	ENSGT00940000155715.nb.a	ENSGT00940000158648.g	ENSGT00940000157092.v.a.a	ENSGT00940000154568.hb	ENSGT00940000158755.i	ENSGT00730000111209.q	ENSGT00940000155190.bb.a.g	ENSGT00940000156301.a.a.c.b	ENSGT00940000174981	ENSGT00390000010922.j	ENSGT00510000049371.m	ENSGT00530000063790.a.a.c #22	ENSGT00940000163583.y.a	ENSGT00940000155151.b.d.f	ENSGT00940000157892.n	ENSGT00390000017398.z	ENSGT00990000211775	ENSGT01030000234635.a.a.a.a.e	ENSGT00940000154667.b.a.e	ENSGT00940000157607.l	ENSGT00390000004674.i.b	ENSGT01010000224837	ENSGT00390000016650.c.a.c #10	ENSGT00940000156539.x #7	ENSGT01020000230412.A.c.b.c.a.c	ENSGT00390000003156.b.e	ENSGT00940000154327.b.f.d
Rainbow trout	MODERN SPECIES	22	CACHD1 (ENSOMYG00000000850)	ENSOMYG00000000816	RAVER2 (ENSOMYG00000053323)	jak1 (ENSOMYG00000000773)	ak4 (ENSOMYG00000000648)	DNAJC6 (ENSOMYG00000000633)	ENSOMYG00000076689	lepr (ENSOMYG00000000549)	PDE4B (ENSOMYG00000000343)	ENSOMYG00000050390	SGIP1 (ENSOMYG00000074909)	ENSOMYG00000035820	pars2 (ENSOMYG00000053304)	ttc4 (ENSOMYG00000035790)	ENSOMYG00000035778	lurap1 (ENSOMYG00000035776) #22	ENSOMYG00000035756	ENSOMYG00000035737	CCN1 (ENSOMYG00000035727)	ENSOMYG00000076395	DDAH1 (ENSOMYG00000035708)	C1orf52 (ENSOMYG00000057298)	ENSOMYG00000055558	ENSOMYG00000062611	SYDE2 (ENSOMYG00000074687)	ENSOMYG00000035648	ENSOMYG00000035620	ENSOMYG00000051472	ENSOMYG00000035615	ENSOMYG00000035589 #10	ENSOMYG00000035570 #7
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000161645.b.h	ENSGT00940000155542.a.c	ENSGT00940000153947.B.i.a	ENSGT00940000157568.g.b	ENSGT00940000155715.nb.a	ENSGT00940000158648.g	ENSGT00940000157092.v.a.a	ENSGT00940000154568.hb	ENSGT00940000158755.i	ENSGT00730000111209.q	ENSGT00940000155190.bb.a.g	ENSGT00940000156301.a.a.c.b	ENSGT00940000174981	ENSGT00390000010922.j	ENSGT00510000049371.m	ENSGT00530000063790.a.a.c #22	ENSGT00940000163514.C	ENSGT00940000163583.y.a	ENSGT00940000155151.b.d.f	ENSGT00940000157892.n	ENSGT00390000017398.z	ENSGT00990000211775	ENSGT01030000234635.a.a.a.a.e	ENSGT00940000154667.b.a.e	ENSGT00940000157607.l	ENSGT00390000004674.i.b	ENSGT01010000224837	ENSGT00390000016650.c.a.c #10	ENSGT00940000156539.x #7	ENSGT01020000230412.A.c.b.c.a.c	ENSGT00390000003156.b.e
Chinook salmon	MODERN SPECIES		ENSOTSG00005011498	pgm1 (ENSOTSG00005011497)	ROR1 (ENSOTSG00005011261)	ENSOTSG00005011256	RAVER2 (ENSOTSG00005011249)	jak1 (ENSOTSG00005008868)	ak4 (ENSOTSG00005008845)	ENSOTSG00005008844	DNAJC6 (ENSOTSG00005008843)	lepr (ENSOTSG00005008832)	PDE4B (ENSOTSG00005008821)	SGIP1 (ENSOTSG00005008819)	ENSOTSG00005008818	pars2 (ENSOTSG00005008817)	ttc4 (ENSOTSG00005008816)	lurap1 (ENSOTSG00005008815) #22	ENSOTSG00005008814	ENSOTSG00005008813	ccn1 (ENSOTSG00005008812)	DDAH1 (ENSOTSG00005008808)	zgc:65873 (ENSOTSG00005008806)	SYDE2 (ENSOTSG00005008804)	ENSOTSG00005008802	ENSOTSG00005008800	FNDC7 (ENSOTSG00005008797)	ENSOTSG00005008795	ENSOTSG00005008793	nasp (ENSOTSG00005008792) #10	akr1a1b (ENSOTSG00005008790) #7	uck2a (ENSOTSG00005008787)	magoh (ENSOTSG00005008783)
Coho salmon	MODERN SPECIES	1	CACHD1 (ENSOKIG00005002042)	ENSOKIG00005001933	RAVER2 (ENSOKIG00005001907)	ENSOKIG00005001893	jak1 (ENSOKIG00005030483)	ak4 (ENSOKIG00005030393)	ENSOKIG00005030383	DNAJC6 (ENSOKIG00005030365)	ENSOKIG00005030352	lepr (ENSOKIG00005029873)	PDE4B (ENSOKIG00005029281)	SGIP1 (ENSOKIG00005029132)	ENSOKIG00005029116	pars2 (ENSOKIG00005029102)	ttc4 (ENSOKIG00005029066)	lurap1 (ENSOKIG00005029017) #22	ENSOKIG00005029005	ENSOKIG00005028989	CCN1 (ENSOKIG00005028956)	DDAH1 (ENSOKIG00005028932)	C1orf52 (ENSOKIG00005028919)	ENSOKIG00005028912	ENSOKIG00005028882	ENSOKIG00005028846	ENSOKIG00005028837	FNDC7 (ENSOKIG00005028825)	ENSOKIG00005028817	ENSOKIG00005028777 #10	AKR1A1 (ENSOKIG00005028709) #7	UCK2 (ENSOKIG00005028583)	ENSOKIG00005028534
Huchen	MODERN SPECIES	229											PDE4B (ENSHHUG00000036414)	ENSHHUG00000036481	SGIP1 (ENSHHUG00000036486)	ENSHHUG00000036502	ttc4 (ENSHHUG00000036522)	lurap1 (ENSHHUG00000036530) #22	ENSHHUG00000036533	ENSHHUG00000036547	ENSHHUG00000036556	ENSHHUG00000036590	ENSHHUG00000036594	ccn1 (ENSHHUG00000025658)	DDAH1 (ENSHHUG00000025660)	zgc:65873 (ENSHHUG00000025663)
Salmoninae	ANCESTRAL SPECIES	104		ENSGT00940000153947.B.i.a	ENSGT00940000157568.g.b	ENSGT00940000158648.g	ENSGT00940000157092.v.a.a	ENSGT00940000154568.hb	ENSGT00940000158755.i	ENSGT00730000111209.q	ENSGT00390000018600	ENSGT00940000155190.bb.a.g	ENSGT00940000156301.a.a.c.b	ENSGT00940000174981	ENSGT00390000010922	ENSGT00510000049371.n	ENSGT00390000007658	ENSGT00530000063790.a.a.d #22	ENSGT00940000154682.C.x	ENSGT00940000161548	ENSGT00940000154682.C.w	ENSGT00940000163583.y.b	ENSGT00390000017201	ENSGT00940000155151.b.d.e	ENSGT00940000157892.m	ENSGT00390000017398.y	ENSGT01030000234635.a.a.a.a.f	ENSGT00940000156924	ENSGT00950000183036.a.a.g	ENSGT00940000154667.b.a.f	ENSGT00940000157607.k.b	ENSGT00390000004674.j	ENSGT00940000157064.a.b.b.a.a
Salmoninae_a	ANCESTRAL SPECIES	9														ENSGT00510000049371.n	ENSGT00390000007658	ENSGT00530000063790.a.a.d #22	ENSGT00940000154682.C.x	ENSGT00940000154682.C.w	ENSGT00940000163514.C	ENSGT00940000163583.y.b	ENSGT00390000017201	ENSGT00940000155151.b.d.e	ENSGT01060000249603	ENSGT00940000157892.m	ENSGT00390000017398.y	ENSGT01030000234635.a.a.a.a.f	ENSGT00940000156924	ENSGT00950000183036.a.a.g	ENSGT00940000154667.b.a.f	ENSGT00940000157607.k.b	ENSGT00390000004674.j
Oncorhynchus	ANCESTRAL SPECIES	8	ENSGT00940000153733.B.i	ENSGT00390000015466	ENSGT00940000153947.B.i.b	ENSGT00940000157568.g.a	ENSGT00940000158648.h	ENSGT00940000157092.v.a.b	ENSGT00940000154568.ib	ENSGT00940000158755.j	ENSGT00730000111209.r	ENSGT00940000155190.bb.a.h	ENSGT00940000156301.a.a.c.a	ENSGT00940000156209	ENSGT00390000010922.i	ENSGT00510000049371.n	ENSGT00390000007658	ENSGT00530000063790.a.a.d #22	ENSGT00940000154682.C.x	ENSGT00940000154682.C.w	ENSGT00940000163583.z	ENSGT00940000163583.y.b	ENSGT00390000017201	ENSGT00940000155151.b.d.e	ENSGT01060000249603	ENSGT00940000157892.m	ENSGT00390000017398.y	ENSGT01030000234635.a.a.a.a.f	ENSGT00940000156924	ENSGT00950000183036.a.a.g	ENSGT00940000154667.b.a.f	ENSGT00940000157607.k.b	ENSGT00390000004798
Oncorhynchus_a	ANCESTRAL SPECIES	14	ENSGT00940000161645.b.g	ENSGT00940000153733.B.i.a	ENSGT00390000015466	ENSGT00940000153947.B.i.b	ENSGT00940000157568.g.a	ENSGT00940000158648.h	ENSGT00940000157092.v.a.b.a	ENSGT00940000154568.ib	ENSGT00940000158755.j	ENSGT00730000111209.r	ENSGT00940000155190.bb.a.h	ENSGT00940000156301.a.a.c.a	ENSGT00940000156209	ENSGT00510000049371.n	ENSGT00390000007658	ENSGT00530000063790.a.a.d #22	ENSGT00940000154682.C.w	ENSGT00940000163583.z	ENSGT00940000163583.y.b	ENSGT00390000017201	ENSGT00940000155151.b.d.e	ENSGT01060000249603	ENSGT00940000157892.m	ENSGT00390000017398.y	ENSGT01030000234635.a.a.a.a.f	ENSGT00940000156924	ENSGT00950000183036.a.a.g	ENSGT00940000154667.b.a.f	ENSGT00940000157607.k.b	ENSGT00940000157064.a.b.b.a.a	ENSGT00390000004798
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	57	ENSOTSG00005027538	ENSOTSG00005027536	ENSOTSG00005027534	ENSOTSG00005027532	ENSOTSG00005027531	casq1b (ENSOTSG00005027513)	PEA15 (ENSOTSG00005027512)	ENSOTSG00005027511	ENSOTSG00005027510	ENSOTSG00005027509	ENSOTSG00005027508	SGIP1 (ENSOTSG00005027504)	dnai4 (ENSOTSG00005027500)	ttc4 (ENSOTSG00005027476)	TTC22 (ENSOTSG00005027469)	lurap1 (ENSOTSG00005027468) #22	CLCA1 (ENSOTSG00005027227)	ENSOTSG00005027222	ENSOTSG00005027218	ZNHIT6 (ENSOTSG00005027216)	ccn1 (ENSOTSG00005027214)	ENSOTSG00005027213	DDAH1 (ENSOTSG00005027211)	zgc:65873 (ENSOTSG00005027209)	SYDE2 (ENSOTSG00005027207)	DNAI3 (ENSOTSG00005027171)	MCOLN3 (ENSOTSG00005027154)	gpsm2l (ENSOTSG00005027060)	STXBP3 (ENSOTSG00005027030)	ENSOTSG00005027028	btg1 (ENSOTSG00005027027)
Chinook salmon	MODERN SPECIES	2924	ENSOTSG00005030129	ENSOTSG00005030131	ENSOTSG00005030137	ENSOTSG00005030138	ENSOTSG00005030141	casq1b (ENSOTSG00005030143)	PEA15 (ENSOTSG00005030185)	ENSOTSG00005030186	ENSOTSG00005030189	ENSOTSG00005030190	ENSOTSG00005030193	SGIP1 (ENSOTSG00005030196)	dnai4 (ENSOTSG00005030202)	ttc4 (ENSOTSG00005030208)	TTC22 (ENSOTSG00005030256)	lurap1 (ENSOTSG00005030536) #22	CLCA1 (ENSOTSG00005030540)	ENSOTSG00005030984	ENSOTSG00005030989	ZNHIT6 (ENSOTSG00005026731)	ccn1 (ENSOTSG00005026732)	ENSOTSG00005026733	DDAH1 (ENSOTSG00005026734)	zgc:65873 (ENSOTSG00005026737)	SYDE2 (ENSOTSG00005026742)	DNAI3 (ENSOTSG00005026747)	MCOLN3 (ENSOTSG00005026755)	ENSOTSG00005026792	STXBP3 (ENSOTSG00005026808)	btg1 (ENSOTSG00005026819)	fam3c (ENSOTSG00005026820)
Coho salmon	MODERN SPECIES	4	ROR1 (ENSOKIG00005046005)	CACHD1 (ENSOKIG00005046102)	RAVER2 (ENSOKIG00005046253)	JAK1 (ENSOKIG00005046327)	ENSOKIG00005047094	ENSOKIG00005013418	ak4 (ENSOKIG00005013429)	DNAJC6 (ENSOKIG00005013448)	lepr (ENSOKIG00005013530)	PDE4B (ENSOKIG00005013669)	ENSOKIG00005014046	SGIP1 (ENSOKIG00005014061)	dnai4 (ENSOKIG00005014149)	ttc4 (ENSOKIG00005014176)	TTC22 (ENSOKIG00005014214)	lurap1 (ENSOKIG00005014311) #22	clca1 (ENSOKIG00005014337)	ENSOKIG00005014479	ENSOKIG00005014513	ZNHIT6 (ENSOKIG00005014528)	ccn1 (ENSOKIG00005014545)	ENSOKIG00005014572	DDAH1 (ENSOKIG00005014579)	zgc:65873 (ENSOKIG00005014589)	SYDE2 (ENSOKIG00005014599)	DNAI3 (ENSOKIG00005014634)	MCOLN3 (ENSOKIG00005015107)	gpsm2l (ENSOKIG00005015185)	STXBP3 (ENSOKIG00005015333)	ENSOKIG00005015747	ENSOKIG00005015758
Rainbow trout	MODERN SPECIES	26	ak4 (ENSOMYG00000008053)	DNAJC6 (ENSOMYG00000007981)	ENSOMYG00000060927	lepr (ENSOMYG00000007753)	ENSOMYG00000048257	ENSOMYG00000076750	PDE4B (ENSOMYG00000005796)	ENSOMYG00000067135	SGIP1 (ENSOMYG00000004310)	dnai4 (ENSOMYG00000004186)	pars2 (ENSOMYG00000035818)	ttc4 (ENSOMYG00000004164)	ENSOMYG00000004094	ENSOMYG00000069436	ENSOMYG00000068053	lurap1 (ENSOMYG00000050470) #22	CLCA1 (ENSOMYG00000050136)	CLCA1 (ENSOMYG00000055714)	CLCA1 (ENSOMYG00000063943)	ENSOMYG00000059961	CLCA1 (ENSOMYG00000003173)	ENSOMYG00000002836	ENSOMYG00000002753	ZNHIT6 (ENSOMYG00000002740)	ccn1 (ENSOMYG00000002715)	ENSOMYG00000002703	ENSOMYG00000071353	DDAH1 (ENSOMYG00000002691)	zgc:65873 (ENSOMYG00000054722)	ENSOMYG00000072958	ENSOMYG00000074834
Salmo	ANCESTRAL SPECIES	14														ENSGT00510000049371.n	ENSGT00390000007658	ENSGT00530000063790.a.a.d #22	ENSGT00940000154682.C.x	ENSGT00940000154682.C.w	ENSGT00940000163514.C	ENSGT00940000163583.y.b	ENSGT00390000017201	ENSGT00940000155151.b.d.e	ENSGT01060000249603	ENSGT00940000157892.m	ENSGT00390000017398.y	ENSGT01030000234635.a.a.a.a.f	ENSGT00940000156924	ENSGT00950000183036.a.a.g	ENSGT00940000154667.b.a.f	ENSGT00940000157607.k.b	ENSGT00390000004674.j
Atlantic salmon	MODERN SPECIES	1	efcab7 (ENSSSAG00000041218)	pgm1 (ENSSSAG00000085324)	ROR1 (ENSSSAG00000054654)	cachd1 (ENSSSAG00000040599)	ENSSSAG00000083593	RAVER2 (ENSSSAG00000103493)	jak1 (ENSSSAG00000038503)	ak4 (ENSSSAG00000081116)	DNAJC6 (ENSSSAG00000063080)	lepr (ENSSSAG00000062407)	PDE4B (ENSSSAG00000081191)	dnai4 (ENSSSAG00000054811)	SGIP1 (ENSSSAG00000054865)	ttc4 (ENSSSAG00000087168)	ENSSSAG00000054408	lurap1 (ENSSSAG00000054386) #22	CLCA1 (ENSSSAG00000053363)	CLCA1 (ENSSSAG00000051653)	ENSSSAG00000084482	ENSSSAG00000051635	znhit6 (ENSSSAG00000051624)	ccn1 (ENSSSAG00000051615)	ENSSSAG00000051612	DDAH1 (ENSSSAG00000051602)	cssa10h1orf52 (ENSSSAG00000051594)	SYDE2 (ENSSSAG00000051582)	DNAI3 (ENSSSAG00000051440)	MCOLN3 (ENSSSAG00000051278)	gpsm2 (ENSSSAG00000051219)	stxbp3 (ENSSSAG00000050706)	ENSSSAG00000050650
River trout	MODERN SPECIES	14	ROR1 (ENSSTUG00000041091)	CACHD1 (ENSSTUG00000040572)	RAVER2 (ENSSTUG00000040497)	jak1 (ENSSTUG00000040336)	ak4 (ENSSTUG00000040296)	DNAJC6 (ENSSTUG00000040128)	ENSSTUG00000040120	lepr (ENSSTUG00000039549)	PDE4B (ENSSTUG00000037779)	SGIP1 (ENSSTUG00000037517)	dnai4 (ENSSTUG00000037444)	pars2 (ENSSTUG00000037429)	ttc4 (ENSSTUG00000037232)	TTC22 (ENSSTUG00000037112)	ENSSTUG00000037098	lurap1 (ENSSTUG00000037087) #22	CLCA2 (ENSSTUG00000035765)	clca1 (ENSSTUG00000035394)	ENSSTUG00000035355	ENSSTUG00000035344	ZNHIT6 (ENSSTUG00000035338)	ccn1 (ENSSTUG00000035314)	ENSSTUG00000035307	DDAH1 (ENSSTUG00000035290)	zgc:65873 (ENSSTUG00000035280)	SYDE2 (ENSSTUG00000035266)	DNAI3 (ENSSTUG00000034721)	MCOLN3 (ENSSTUG00000034558)	gpsm2l (ENSSTUG00000034497)	stxbp3 (ENSSTUG00000034280)	ENSSTUG00000034243
Huchen	MODERN SPECIES	1473											ENSHHUG00000050801	dnai4 (ENSHHUG00000050788)	pars2 (ENSHHUG00000050784)	ttc4 (ENSHHUG00000050776)	TTC22 (ENSHHUG00000050774)	lurap1 (ENSHHUG00000050770) #22	ENSHHUG00000050763	ENSHHUG00000050675	ENSHHUG00000050664	ENSHHUG00000050661	ENSHHUG00000050656
Northern pike	MODERN SPECIES	7	efcab7 (ENSELUG00000001058)	ROR1 (ENSELUG00000022236)	CACHD1 (ENSELUG00000022312)	RAVER2 (ENSELUG00000022384)	jak1 (ENSELUG00000022457)	ak4 (ENSELUG00000022480)	DNAJC6 (ENSELUG00000022502)	lepr (ENSELUG00000022567)	ENSELUG00000025775	PDE4B (ENSELUG00000022680)	SGIP1 (ENSELUG00000022736)	insl5a (ENSELUG00000022758)	dnai4 (ENSELUG00000022844)	ttc4 (ENSELUG00000022921)	TTC22 (ENSELUG00000022941)	lurap1 (ENSELUG00000022952) #22	ENSELUG00000031759	ENSELUG00000022977	ZNHIT6 (ENSELUG00000023035)	ccn1 (ENSELUG00000023051)	DDAH1 (ENSELUG00000023108)	zgc:65873 (ENSELUG00000023125)	SYDE2 (ENSELUG00000023134)	DNAI3 (ENSELUG00000023142)	MCOLN3 (ENSELUG00000023196)	ENSELUG00000023255	stxbp3 (ENSELUG00000023333)	FNDC7 (ENSELUG00000023352)	ENSELUG00000023457	henmt1 (ENSELUG00000023477)	fam102bb (ENSELUG00000023557)
Clupeocephala	ANCESTRAL SPECIES	273	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00940000175752	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00530000063497.b	ENSGT00940000165852	ENSGT00950000183036.a.a.h	ENSGT00390000007688.a.b	ENSGT01100000263525.a.b.b.i
Euteleosteomorpha	ANCESTRAL SPECIES	10	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00530000063497.b	ENSGT00940000155151.b.e	ENSGT00940000165852	ENSGT00950000183036.a.a.h	ENSGT00390000007688.a.b	ENSGT01100000263525.a.b.b.i	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Protacanthopterygii	ANCESTRAL SPECIES	14	ENSGT00940000156906.j.a.b	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00530000063497.b	ENSGT00940000155151.b.e	ENSGT00940000165852	ENSGT00950000183036.a.a.h	ENSGT00390000007688.a.b	ENSGT01100000263525.a.b.b.i	ENSGT00530000063936.b	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Salmoninae	ANCESTRAL SPECIES	24	ENSGT00940000156906.j.a.b.e	ENSGT00530000063187.B.d.d	ENSGT00940000155091.eb.b.f	ENSGT00390000011644.e	ENSGT00940000162061.a.b.b	ENSGT01000000214434.F	ENSGT00940000164279.a.c	ENSGT00940000158561.b.a	ENSGT00940000158056.w.b	ENSGT00390000013502.a.b.b	ENSGT00940000158038.c.b.f	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d.d	ENSGT00940000166722.b	ENSGT00530000063790.a.b #22	ENSGT01030000234583.a.a.d.n	ENSGT00530000063497.b.h	ENSGT00940000155151.b.e.a	ENSGT00940000165852.e.a	ENSGT00390000007688.a.b.d	ENSGT01100000263525.a.b.b.i.a	ENSGT00530000063936.b.l	ENSGT00390000010727	ENSGT00940000155265.a.g.f	ENSGT00940000161639.f	ENSGT00390000006960.k.b	ENSGT00940000157532.b.d	ENSGT00940000155450.c.f	ENSGT00940000156182.d	ENSGT00400000022086.a.j
Salmoninae_a	ANCESTRAL SPECIES	2	ENSGT00940000156906.j.a.b.e	ENSGT00530000063187.B.d.d	ENSGT00940000155091.eb.b.f	ENSGT00390000011644.e	ENSGT00940000162061.a.b.b	ENSGT01000000214434.F	ENSGT00940000164279.a.c	ENSGT00940000158561.b.a	ENSGT00940000158056.w.b	ENSGT00390000013502.a.b.b	ENSGT00940000158038.c.b.f	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d.d	ENSGT00940000166722.b	ENSGT00530000063790.a.b #22	ENSGT00530000063497.b.h	ENSGT00940000155151.b.e.a	ENSGT00940000165852.e.a	ENSGT00390000007688.a.b.d	ENSGT01100000263525.a.b.b.i.a	ENSGT00530000063936.b.l	ENSGT00390000010727	ENSGT00940000155265.a.g.f	ENSGT00940000161639.f	ENSGT00390000006960.k.b	ENSGT00940000157532.b.d	ENSGT00940000155450.c.f	ENSGT00940000156182.d	ENSGT00400000022086.a.j	ENSGT00940000160814.d
Salmo	ANCESTRAL SPECIES	21	ENSGT00530000063187.B.d.d	ENSGT00940000155091.eb.b.f	ENSGT00390000011644.e	ENSGT00940000162061.a.b.b	ENSGT01000000214434.F	ENSGT00940000164279.a.c	ENSGT00940000158561.b.a	ENSGT00940000158056.w.b	ENSGT00390000013502.a.b.b	ENSGT00940000177219.c	ENSGT00940000158038.c.b.f	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d.d	ENSGT00940000166722.b	ENSGT00530000063790.a.b #22	ENSGT00530000063497.b.h	ENSGT00940000155151.b.e.a	ENSGT00940000165852.e.a	ENSGT00390000007688.a.b.d	ENSGT01100000263525.a.b.b.i.a	ENSGT00530000063936.b.l	ENSGT00390000010727	ENSGT00940000155265.a.g.f	ENSGT00940000161639.f	ENSGT00390000006960.k.b	ENSGT00940000157532.b.d	ENSGT00940000155450.c.f	ENSGT00940000156182.d	ENSGT00400000022086.a.j	ENSGT00940000160814.d
River trout	MODERN SPECIES	13	ENSSTUG00000028612	angptl1b (ENSSTUG00000028575)	TADA1 (ENSSTUG00000028560)	JUN (ENSSTUG00000028557)	fggy (ENSSTUG00000027818)	ENSSTUG00000027788	MYOC (ENSSTUG00000027782)	ENSSTUG00000027662	ENSSTUG00000027618	ENSSTUG00000027601	ENSSTUG00000027592	ENSSTUG00000027526	ENSSTUG00000027515	PLPP3 (ENSSTUG00000027499)	ENSSTUG00000027487	ENSSTUG00000027485 #22	ENSSTUG00000027459	CCN1 (ENSSTUG00000027451)	ENSSTUG00000027447	ssx2ipa (ENSSTUG00000027436)	gng5 (ENSSTUG00000027433)	samd13 (ENSSTUG00000027429)	ENSSTUG00000027426	gpt (ENSSTUG00000027166)	c1ql3b (ENSSTUG00000027145)	pter (ENSSTUG00000027131)	MMP16 (ENSSTUG00000026724)	egfra (ENSSTUG00000024704)	npc1 (ENSSTUG00000020952)	cables1 (ENSSTUG00000020712)	gata6 (ENSSTUG00000020669)
Atlantic salmon	MODERN SPECIES	5	ENSSSAG00000074236	ENSSSAG00000074233	ENSSSAG00000074169	angptl1b (ENSSSAG00000074155)	ENSSSAG00000103133	fggy (ENSSSAG00000073915)	ENSSSAG00000073907	ENSSSAG00000073905	ENSSSAG00000073788	ENSSSAG00000073756	ENSSSAG00000085043	DAB1 (ENSSSAG00000073733)	C8A (ENSSSAG00000073702)	ENSSSAG00000073690	PLPP3 (ENSSSAG00000073687)	ENSSSAG00000073677 #22	ENSSSAG00000073680	ENSSSAG00000073668	ENSSSAG00000073657	ENSSSAG00000100121	ENSSSAG00000073650	ENSSSAG00000073647	fuz (ENSSSAG00000073645)	ENSSSAG00000073646	alat2 (ENSSSAG00000073540)	c1ql3b (ENSSSAG00000103157)	pter (ENSSSAG00000073517)	ENSSSAG00000039918	egfra (ENSSSAG00000067891)	npc1 (ENSSSAG00000092995)	ENSSSAG00000115680
Oncorhynchus	ANCESTRAL SPECIES	11	ENSGT00940000156906.j.a.b.e	ENSGT00530000063187.B.d.d	ENSGT00940000155091.eb.b.f	ENSGT00390000011644.e	ENSGT00940000162061.a.b.b	ENSGT01000000214434.F	ENSGT00940000164279.a.c	ENSGT00940000158561.b.a	ENSGT00940000158056.w.b	ENSGT00390000013502.a.b.b	ENSGT00940000158038.c.b.f	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d.d	ENSGT00940000166722.b	ENSGT00530000063790.a.b #22	ENSGT01030000234583.a.a.d.n	ENSGT00940000155151.b.e.a	ENSGT00940000165852.e.a	ENSGT00390000007688.a.b.d	ENSGT01100000263525.a.b.b.i.a	ENSGT00530000063936.b.l	ENSGT00390000010727	ENSGT00940000155265.a.g.f	ENSGT00940000161639.f	ENSGT00390000006960.k.b	ENSGT00940000157532.b.d	ENSGT00940000155450.c.f	ENSGT00940000156182.d	ENSGT00400000022086.a.j	ENSGT00940000160814.d
Oncorhynchus_a	ANCESTRAL SPECIES	24	ENSGT00940000156906.j.a.b.e	ENSGT00530000063187.B.d.d	ENSGT00940000155091.eb.b.f	ENSGT00390000011644.e	ENSGT00940000162061.a.b.b	ENSGT01000000214434.F	ENSGT00940000164279.a.c	ENSGT00940000158561.b.a	ENSGT00940000158056.w.b	ENSGT00390000013502.a.b.b	ENSGT00940000158038.c.b.f	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d.d	ENSGT00940000166722.b	ENSGT00530000063790.a.b #22	ENSGT01030000234583.a.a.d.n	ENSGT00940000155151.b.e.a	ENSGT00940000165852.e.a	ENSGT00390000007688.a.b.d	ENSGT01100000263525.a.b.b.i.a	ENSGT00530000063936.b.l	ENSGT00390000010727	ENSGT00940000155265.a.g.f	ENSGT00940000161639.f	ENSGT00390000006960.k.b	ENSGT00940000157532.b.d	ENSGT00940000155450.c.f	ENSGT00940000156182.d	ENSGT00400000022086.a.j	ENSGT00940000160814.d
Chinook salmon	MODERN SPECIES	1	TADA1 (ENSOTSG00005032123)	JUN (ENSOTSG00005032121)	fggy (ENSOTSG00005032003)	ENSOTSG00005031879	MYOC (ENSOTSG00005031875)	ENSOTSG00005031870	ENSOTSG00005031462	ENSOTSG00005031454	pofut2 (ENSOTSG00005031451)	ENSOTSG00005043855	ENSOTSG00005043852	C8A (ENSOTSG00005043848)	ENSOTSG00005043847	PLPP3 (ENSOTSG00005043846)	ENSOTSG00005043845	ENSOTSG00005043844 #22	ENSOTSG00005043843	CCN1 (ENSOTSG00005043842)	ENSOTSG00005043841	ssx2ipa (ENSOTSG00005043839)	gng5 (ENSOTSG00005043838)	samd13 (ENSOTSG00005043837)	ENSOTSG00005043836	gpt (ENSOTSG00005042417)	c1ql3b (ENSOTSG00005042408)	pter (ENSOTSG00005042407)	MMP16 (ENSOTSG00005042328)	egfra (ENSOTSG00005042167)	npc1 (ENSOTSG00005033516)	cables1 (ENSOTSG00005033449)	gata6 (ENSOTSG00005033448)
Coho salmon	MODERN SPECIES	23	ENSOKIG00005036825	ENSOKIG00005035472	angptl1b (ENSOKIG00005035369)	ENSOKIG00005035324	JUN (ENSOKIG00005035311)	fggy (ENSOKIG00005034733)	ENSOKIG00005034698	MYOC (ENSOKIG00005034686)	ENSOKIG00005034424	ENSOKIG00005034373	DAB1 (ENSOKIG00005034354)	C8A (ENSOKIG00005034278)	ENSOKIG00005034242	PLPP3 (ENSOKIG00005034227)	ENSOKIG00005034207	ENSOKIG00005034177 #22	ENSOKIG00005034162	CCN1 (ENSOKIG00005034149)	ENSOKIG00005034138	SSX2IP (ENSOKIG00005034083)	gng5 (ENSOKIG00005034060)	ENSOKIG00005034049	gpt (ENSOKIG00005033813)	c1ql3b (ENSOKIG00005033783)	MMP16 (ENSOKIG00005031613)	egfra (ENSOKIG00005029908)	npc1 (ENSOKIG00005024613)	cables1 (ENSOKIG00005024335)	GATA6 (ENSOKIG00005024311)	mib1 (ENSOKIG00005023642)	ABHD3 (ENSOKIG00005050171)
Rainbow trout	MODERN SPECIES	29	ENSOMYG00000018165	angptl1b (ENSOMYG00000018144)	ENSOMYG00000018131	ENSOMYG00000018123	fggy (ENSOMYG00000017775)	ENSOMYG00000069234	ENSOMYG00000017715	ENSOMYG00000017711	ENSOMYG00000073177	ENSOMYG00000017189	ENSOMYG00000064203	ENSOMYG00000017050	c8a (ENSOMYG00000016985)	ENSOMYG00000016936	ENSOMYG00000016923	ENSOMYG00000016887 #22	ENSOMYG00000016905	ENSOMYG00000069196	ENSOMYG00000016865	ENSOMYG00000016854	ENSOMYG00000016839	gbg5 (ENSOMYG00000016830)	ENSOMYG00000016810	ENSOMYG00000016802	gpt (ENSOMYG00000016362)	c1ql3b (ENSOMYG00000044798)	pter (ENSOMYG00000044797)	ENSOMYG00000075657	ENSOMYG00000044780	egfra (ENSOMYG00000044543)	npc1 (ENSOMYG00000044191)
Huchen	MODERN SPECIES	921															ENSHHUG00000027191	ENSHHUG00000027185 #22	ENSHHUG00000027178	ENSHHUG00000027155	CCN1 (ENSHHUG00000027145)	ENSHHUG00000027142	ssx2ipa (ENSHHUG00000027132)	gng5 (ENSHHUG00000027097)	samd13 (ENSHHUG00000027091)	ENSHHUG00000027090	gpt (ENSHHUG00000027017)	c1ql3b (ENSHHUG00000027012)	pter (ENSHHUG00000027001)	MMP16 (ENSHHUG00000026955)	egfra (ENSHHUG00000026026)	npc1 (ENSHHUG00000025725)	cables1 (ENSHHUG00000025633)
Northern pike	MODERN SPECIES	2	ENSELUG00000031196	ENSELUG00000003208	angptl1b (ENSELUG00000003190)	TADA1 (ENSELUG00000003178)	JUN (ENSELUG00000003166)	fggy (ENSELUG00000003153)	ENSELUG00000003134	MYOC (ENSELUG00000024633)	ENSELUG00000024630	ENSELUG00000024620	dab1b (ENSELUG00000024598)	c8b (ENSELUG00000024532)	C8A (ENSELUG00000024484)	ENSELUG00000024446	PLPP3 (ENSELUG00000001030)	ENSELUG00000024401 #22	ENSELUG00000024381	ENSELUG00000024366	ENSELUG00000024357	ssx2ipa (ENSELUG00000024281)	gng5 (ENSELUG00000024260)	samd13 (ENSELUG00000024271)	ENSELUG00000024254	gpt (ENSELUG00000024247)	c1ql3b (ENSELUG00000024207)	pter (ENSELUG00000024191)	MMP16 (ENSELUG00000024178)	egfra (ENSELUG00000024112)	npc1 (ENSELUG00000024020)	cables1 (ENSELUG00000023949)	gata6 (ENSELUG00000023929)
Acanthomorphata	ANCESTRAL SPECIES		ENSGT00530000063187.B.d	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370
Euacanthomorphacea	ANCESTRAL SPECIES	4	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT00940000177628	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Percomorphaceae	ANCESTRAL SPECIES	6	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Percomorphaceae_B	ANCESTRAL SPECIES	8	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Ovalentaria	ANCESTRAL SPECIES	5	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Atherinomorphae	ANCESTRAL SPECIES	4	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT00940000177628	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	5	ENSGT00940000156906.j.a.b	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT00940000177628	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Cyprinodontoidei	ANCESTRAL SPECIES	2	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT00940000177628	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
NAME_4	ANCESTRAL SPECIES	35	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B.f	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b.d
Mummichog	MODERN SPECIES	2184	angptl1b (ENSFHEG00000014861)	TADA1 (ENSFHEG00000014848)	ENSFHEG00000014803	JUN (ENSFHEG00000014792)	fggy (ENSFHEG00000014777)	ENSFHEG00000014686	PLPP6 (ENSFHEG00000014665)	MYOC (ENSFHEG00000014668)	ENSFHEG00000000355	ENSFHEG00000014592	dab1b (ENSFHEG00000014550)	c8b (ENSFHEG00000014480)	C8A (ENSFHEG00000014462)	si:ch211-188c16.1 (ENSFHEG00000014331)	PLPP3 (ENSFHEG00000014319)	ENSFHEG00000014305 #22	pgap6 (ENSFHEG00000014296)	rgs11 (ENSFHEG00000014270)	ints15 (ENSFHEG00000014251)	ENSFHEG00000014243	ENSFHEG00000014229	ENSFHEG00000014119
Sheepshead minnow	MODERN SPECIES	191	ENSCVAG00000013618	ENSCVAG00000013628	angptl1b (ENSCVAG00000013667)	TADA1 (ENSCVAG00000013703)	JUN (ENSCVAG00000013713)	fggy (ENSCVAG00000013768)	ENSCVAG00000013786	PLPP6 (ENSCVAG00000013793)	MYOC (ENSCVAG00000013795)	ENSCVAG00000013879	ENSCVAG00000013915	dab1b (ENSCVAG00000013966)	c8b (ENSCVAG00000013985)	C8A (ENSCVAG00000013995)	PLPP3 (ENSCVAG00000000826)	ENSCVAG00000014018 #22	pgap6 (ENSCVAG00000014033)	rgs11 (ENSCVAG00000014086)	ints15 (ENSCVAG00000014101)	tfr1a (ENSCVAG00000014116)	ENSCVAG00000014268	ENSCVAG00000014303
Poeciliinae	ANCESTRAL SPECIES	6	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT00940000177628	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Poecilia	ANCESTRAL SPECIES	19	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT00940000177628	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
NAME_6	ANCESTRAL SPECIES	50	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00550000074836.o
Amazon molly	MODERN SPECIES	318	ENSPFOG00000010346	angptl1b (ENSPFOG00000010531)	TADA1 (ENSPFOG00000010567)	JUN (ENSPFOG00000020076)	fggy (ENSPFOG00000010673)	ENSPFOG00000010852	PLPP6 (ENSPFOG00000010886)	MYOC (ENSPFOG00000010892)	ENSPFOG00000010907	ENSPFOG00000011154	dab1b (ENSPFOG00000011361)	c8b (ENSPFOG00000011488)	C8A (ENSPFOG00000011892)	ENSPFOG00000022407	PLPP3 (ENSPFOG00000012245)	ENSPFOG00000012297 #22	pgap6 (ENSPFOG00000012309)	rgs11 (ENSPFOG00000012458)	ints15 (ENSPFOG00000012742)	rgs11 (ENSPFOG00000022336)	tfr1a (ENSPFOG00000012777)	ENSPFOG00000012933	ENSPFOG00000013166	ENSPFOG00000013185	ENSPFOG00000013260	mkxb (ENSPFOG00000013469)	rab18b (ENSPFOG00000013491)	yme1l1b (ENSPFOG00000013526)
Sailfin molly	MODERN SPECIES	195				lims1 (ENSPLAG00000004029)	ENSPLAG00000004013	ENSPLAG00000003966	PLPP6 (ENSPLAG00000003955)	MYOC (ENSPLAG00000003945)	ENSPLAG00000003928	ENSPLAG00000003867	dab1b (ENSPLAG00000003848)	c8b (ENSPLAG00000003817)	C8A (ENSPLAG00000003749)	si:ch211-188c16.1 (ENSPLAG00000003711)	PLPP3 (ENSPLAG00000003685)	ENSPLAG00000003657 #22	pgap6 (ENSPLAG00000003650)	rgs11 (ENSPLAG00000003634)	ints15 (ENSPLAG00000003621)
Platyfish	MODERN SPECIES	20	ENSXMAG00000018334	angptl1b (ENSXMAG00000018324)	TADA1 (ENSXMAG00000018304)	JUN (ENSXMAG00000019972)	fggy (ENSXMAG00000018286)	ENSXMAG00000018279	PLPP6 (ENSXMAG00000018278)	MYOC (ENSXMAG00000028903)	DNM3 (ENSXMAG00000018256)	ENSXMAG00000018248	dab1b (ENSXMAG00000027199)	c8b (ENSXMAG00000018193)	C8A (ENSXMAG00000018166)	si:ch211-188c16.1 (ENSXMAG00000021786)	PLPP3 (ENSXMAG00000018151)	ENSXMAG00000002731 #22	pgap6 (ENSXMAG00000028125)	rgs11 (ENSXMAG00000011058)	ints15 (ENSXMAG00000011052)	tfr1a (ENSXMAG00000011028)	ENSXMAG00000017201	ENSXMAG00000021176	ENSXMAG00000017233	ENSXMAG00000007015	ENSXMAG00000006979	mkxb (ENSXMAG00000006967)	rab18b (ENSXMAG00000006945)	yme1l1b (ENSXMAG00000006901)	ENSXMAG00000022010	abi1b (ENSXMAG00000006866)	ENSXMAG00000006861
Oryzias	ANCESTRAL SPECIES	12	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b	ENSGT00960000186677
Oryzias_b	ANCESTRAL SPECIES	8	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b	ENSGT00960000186677
Indian medaka	MODERN SPECIES	10	ENSOMEG00000009023	angptl1b (ENSOMEG00000008952)	TADA1 (ENSOMEG00000008922)	JUN (ENSOMEG00000008865)	fggy (ENSOMEG00000008796)	ENSOMEG00000008671	PLPP6 (ENSOMEG00000000743)	MYOC (ENSOMEG00000008626)	DNM3 (ENSOMEG00000008594)	ENSOMEG00000008499	dab1b (ENSOMEG00000008416)	c8b (ENSOMEG00000008383)	C8A (ENSOMEG00000008358)	si:ch211-188c16.1 (ENSOMEG00000008318)	PLPP3 (ENSOMEG00000008275)	ENSOMEG00000008248 #22	pgap6 (ENSOMEG00000008228)	rgs11 (ENSOMEG00000000794)	ints15 (ENSOMEG00000008017)	tfr1a (ENSOMEG00000007992)	ENSOMEG00000007936	ENSOMEG00000007767	ENSOMEG00000007750	ENSOMEG00000007703	mkxb (ENSOMEG00000007576)	rab18b (ENSOMEG00000007546)	yme1l1b (ENSOMEG00000007513)	ENSOMEG00000007474	abi1b (ENSOMEG00000007440)	ENSOMEG00000007361	ENSOMEG00000007337
Javanese ricefish	MODERN SPECIES	8	angptl1b (ENSOJAG00000004353)	TADA1 (ENSOJAG00000004296)	JUN (ENSOJAG00000004276)	fggy (ENSOJAG00000003973)	ENSOJAG00000003924	PLPP6 (ENSOJAG00000003913)	MYOC (ENSOJAG00000003902)	ENSOJAG00000003867	DNM3 (ENSOJAG00000003736)	ENSOJAG00000003615	dab1b (ENSOJAG00000003566)	c8b (ENSOJAG00000003498)	C8A (ENSOJAG00000003390)	si:ch211-188c16.1 (ENSOJAG00000003350)	PLPP3 (ENSOJAG00000003333)	ENSOJAG00000003324 #22	pgap6 (ENSOJAG00000003292)	ints15 (ENSOJAG00000003280)	rgs11 (ENSOJAG00000002496)	tfr1a (ENSOJAG00000002067)	ENSOJAG00000001970	ENSOJAG00000018382	ENSOJAG00000018369	ENSOJAG00000018355	ENSOJAG00000018134	mkxb (ENSOJAG00000018115)	rab18b (ENSOJAG00000018077)	yme1l1b (ENSOJAG00000017720)	ENSOJAG00000017688	abi1b (ENSOJAG00000017509)	ENSOJAG00000017444
Oryzias_a	ANCESTRAL SPECIES	7	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b	ENSGT00960000186677
Japanese Medaka HdrR	MODERN SPECIES	8	ENSORLG00000010168	ENSORLG00000010138	TADA1 (ENSORLG00000010125)	ENSORLG00000010096	ENSORLG00000010012	fggy (ENSORLG00000010087)	ENSORLG00000025605	MYOC (ENSORLG00000022277)	ENSORLG00000009977	ENSORLG00000009886	dab1b (ENSORLG00000009863)	c8b (ENSORLG00000009829)	C8A (ENSORLG00000009804)	si:ch211-188c16.1 (ENSORLG00000024763)	PLPP3 (ENSORLG00000009775)	ENSORLG00000009750 #22	pgap6 (ENSORLG00000009746)	rgs11 (ENSORLG00000009733)	ints15 (ENSORLG00000009710)	tfr1a (ENSORLG00000009702)	ENSORLG00000023375	ENSORLG00000009687	ENSORLG00000024476	ENSORLG00000025079	ENSORLG00000009667	ENSORLG00000009644	mkxb (ENSORLG00000009614)	rab18b (ENSORLG00000009609)	yme1l1b (ENSORLG00000009591)	ENSORLG00000009551	abi1b (ENSORLG00000009513)
Chinese medaka	MODERN SPECIES	615	mgst3a (ENSOSIG00000016003)	ENSOSIG00000016002	ENSOSIG00000015164	angptl1b (ENSOSIG00000015161)	TADA1 (ENSOSIG00000015160)	JUN (ENSOSIG00000015159)	fggy (ENSOSIG00000014775)	ENSOSIG00000014770	PLPP6 (ENSOSIG00000014768)	MYOC (ENSOSIG00000014767)	ENSOSIG00000014422	dab1b (ENSOSIG00000014418)	c8b (ENSOSIG00000014169)	C8A (ENSOSIG00000014165)	PLPP3 (ENSOSIG00000014163)	ENSOSIG00000014162 #22	pgap6 (ENSOSIG00000014161)	rgs11 (ENSOSIG00000013088)	ints15 (ENSOSIG00000013078)
Ovalentaria_B	ANCESTRAL SPECIES	6	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Cichlidae	ANCESTRAL SPECIES	2	ENSGT00940000156906.j.a.b	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	7	ENSGT00940000156906.j.a.b	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Haplochromini	ANCESTRAL SPECIES	2	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Haplochromini_A	ANCESTRAL SPECIES	3	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Haplochromini_B	ANCESTRAL SPECIES	12	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b.i.a	ENSGT01030000234598.a.a.a.b.i.b	ENSGT00940000177628	ENSGT01030000234598.a.a.a.b.j	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o
Zebra mbuna	MODERN SPECIES	1100	ENSMZEG00005009222	angptl1b (ENSMZEG00005009191)	TADA1 (ENSMZEG00005009177)	JUN (ENSMZEG00005009160)	fggy (ENSMZEG00005009131)	PLPP6 (ENSMZEG00005009110)	PRDX6 (ENSMZEG00005009097)	MYOC (ENSMZEG00005009084)	ENSMZEG00005008968	ENSMZEG00005008932	dab1b (ENSMZEG00005008868)	c8b (ENSMZEG00005008837)	C8A (ENSMZEG00005008826)	si:ch211-188c16.1 (ENSMZEG00005008810)	PLPP3 (ENSMZEG00005008790)	ENSMZEG00005008776 #22	pgap6 (ENSMZEG00005008765)	rgs11 (ENSMZEG00005008746)	ints15 (ENSMZEG00005008732)	tfr1a (ENSMZEG00005008704)	tfr1a (ENSMZEG00005008672)	tfr1a (ENSMZEG00005008562)	ENSMZEG00005008486	ENSMZEG00005008381	ENSMZEG00005008368	ENSMZEG00005008287	mkxb (ENSMZEG00005008265)	rab18b (ENSMZEG00005008244)	ENSMZEG00005008217	yme1l1b (ENSMZEG00005008162)	ENSMZEG00005008147
Eastern happy	MODERN SPECIES	9	TADA1 (ENSACLG00000013931)	JUN (ENSACLG00000013953)	fggy (ENSACLG00000013989)	ENSACLG00000014078	PRDX6 (ENSACLG00000014089)	PLPP6 (ENSACLG00000014150)	MYOC (ENSACLG00000014168)	DNM3 (ENSACLG00000014181)	ENSACLG00000014329	ENSACLG00000014413	dab1b (ENSACLG00000014425)	c8b (ENSACLG00000014457)	C8A (ENSACLG00000014491)	ENSACLG00000014504	PLPP3 (ENSACLG00000014558)	ENSACLG00000014574 #22	pgap6 (ENSACLG00000014599)	rgs11 (ENSACLG00000014632)	ints15 (ENSACLG00000014733)	tfr1a (ENSACLG00000014745)	tfr1a (ENSACLG00000014797)	ENSACLG00000014838	ENSACLG00000014853	ENSACLG00000015154	ENSACLG00000015168	ENSACLG00000015199	mkxb (ENSACLG00000015273)	rab18b (ENSACLG00000015289)	PTCHD3 (ENSACLG00000015333)	yme1l1b (ENSACLG00000015364)	ENSACLG00000015502
Burton s mouthbrooder	MODERN SPECIES	1311																ENSHBUG00000020337 #22	pgap6 (ENSHBUG00000020345)	rgs11 (ENSHBUG00000020392)	ints15 (ENSHBUG00000020406)	ENSHBUG00000020421
Nile tilapia	MODERN SPECIES	9	angptl1b (ENSONIG00000018643)	TADA1 (ENSONIG00000018644)	JUN (ENSONIG00000021256)	fggy (ENSONIG00000018645)	ENSONIG00000041334	PRDX6 (ENSONIG00000037608)	PLPP6 (ENSONIG00000018646)	MYOC (ENSONIG00000033170)	ENSONIG00000018649	ENSONIG00000018650	dab1b (ENSONIG00000018651)	c8b (ENSONIG00000018652)	C8A (ENSONIG00000018653)	si:ch211-188c16.1 (ENSONIG00000018654)	PLPP3 (ENSONIG00000018656)	ENSONIG00000041681 #22	pgap6 (ENSONIG00000018659)	rgs11 (ENSONIG00000018661)	ints15 (ENSONIG00000018663)	tfr1a (ENSONIG00000038316)	ENSONIG00000018667	ENSONIG00000041221	ENSONIG00000018670	ENSONIG00000018671	mkxb (ENSONIG00000018672)	rab18b (ENSONIG00000034920)	ENSONIG00000018674	ENSONIG00000039132	yme1l1b (ENSONIG00000018675)	ENSONIG00000034134	ENSONIG00000027874
Midas cichlid	MODERN SPECIES	733	ENSACIG00000011580	angptl1b (ENSACIG00000011544)	TADA1 (ENSACIG00000011522)	JUN (ENSACIG00000011488)	fggy (ENSACIG00000011454)	PRDX6 (ENSACIG00000011439)	MYOC (ENSACIG00000011422)	PLPP6 (ENSACIG00000011409)	ENSACIG00000011352	SUCO (ENSACIG00000011322)	dab1b (ENSACIG00000011310)	c8b (ENSACIG00000011272)	C8A (ENSACIG00000011240)	si:ch211-188c16.1 (ENSACIG00000011217)	PLPP3 (ENSACIG00000011204)	ENSACIG00000011194 #22	pgap6 (ENSACIG00000011173)	rgs11 (ENSACIG00000011134)	ints15 (ENSACIG00000011111)	ENSACIG00000011103	tfr1a (ENSACIG00000011065)	tfr1a (ENSACIG00000010981)	ENSACIG00000010959	xirp1 (ENSACIG00000010945)	CSRNP1 (ENSACIG00000010903)	gorasp1a (ENSACIG00000010870)	wdr48b (ENSACIG00000010825)	ENSACIG00000010815	scn12aa (ENSACIG00000010766)	ENSACIG00000010752	ENSACIG00000010739
Pomacentridae	ANCESTRAL SPECIES	6	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Pomacentridae_A	ANCESTRAL SPECIES	18	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Amphiprion	ANCESTRAL SPECIES	33	ENSGT00940000156906.j.a.b	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Clown anemonefish	MODERN SPECIES	566	angptl1b (ENSAOCG00000024588)	TADA1 (ENSAOCG00000024586)	JUN (ENSAOCG00000024583)	fggy (ENSAOCG00000002420)	PRDX6 (ENSAOCG00000024569)	PLPP6 (ENSAOCG00000024568)	ENSAOCG00000024565	MYOC (ENSAOCG00000024562)	ENSAOCG00000024559	ENSAOCG00000024543	ENSAOCG00000024535	dab1b (ENSAOCG00000024525)	c8b (ENSAOCG00000024509)	C8A (ENSAOCG00000024502)	PLPP3 (ENSAOCG00000024493)	ENSAOCG00000024488 #22	pgap6 (ENSAOCG00000024482)	rgs11 (ENSAOCG00000024466)	ints15 (ENSAOCG00000024455)	tfr1a (ENSAOCG00000024448)	ppp2r1bb (ENSAOCG00000024440)	med29 (ENSAOCG00000001776)	mlf1 (ENSAOCG00000024420)	rsrc1 (ENSAOCG00000024414)
Orange clownfish	MODERN SPECIES	1	ENSAPEG00000001070	ENSAPEG00000000838	angptl1b (ENSAPEG00000000819)	TADA1 (ENSAPEG00000000816)	JUN (ENSAPEG00000000765)	fggy (ENSAPEG00000000709)	PRDX6 (ENSAPEG00000000647)	PLPP6 (ENSAPEG00000000599)	MYOC (ENSAPEG00000000587)	ENSAPEG00000000472	ENSAPEG00000000455	dab1b (ENSAPEG00000000396)	c8b (ENSAPEG00000000386)	C8A (ENSAPEG00000000375)	PLPP3 (ENSAPEG00000000323)	ENSAPEG00000023293 #22	pgap6 (ENSAPEG00000023283)	rgs11 (ENSAPEG00000023246)	ints15 (ENSAPEG00000023225)	tfr1a (ENSAPEG00000023216)	ENSAPEG00000023155	ENSAPEG00000023091	ENSAPEG00000023080	ENSAPEG00000022990	mkxb (ENSAPEG00000022942)	rab18b (ENSAPEG00000022923)	PTCHD3 (ENSAPEG00000022908)	yme1l1b (ENSAPEG00000022866)	ENSAPEG00000022839	abi1b (ENSAPEG00000022801)	APBB1IP (ENSAPEG00000022785)
Spiny chromis	MODERN SPECIES	159	ENSAPOG00000022418	angptl1b (ENSAPOG00000022434)	TADA1 (ENSAPOG00000022477)	JUN (ENSAPOG00000000642)	fggy (ENSAPOG00000022585)	PRDX6 (ENSAPOG00000022611)	PLPP6 (ENSAPOG00000022624)	MYOC (ENSAPOG00000022632)	ENSAPOG00000022719	ENSAPOG00000022806	dab1b (ENSAPOG00000022848)	c8b (ENSAPOG00000022873)	C8A (ENSAPOG00000022890)	si:ch211-188c16.1 (ENSAPOG00000022936)	PLPP3 (ENSAPOG00000022971)	ENSAPOG00000022985 #22	pgap6 (ENSAPOG00000023023)	rgs11 (ENSAPOG00000023101)	ints15 (ENSAPOG00000023159)	tfr1a (ENSAPOG00000023185)
Bicolor damselfish	MODERN SPECIES	236	angptl1b (ENSSPAG00000005077)	TADA1 (ENSSPAG00000005092)	JUN (ENSSPAG00000005123)	fggy (ENSSPAG00000005132)	PRDX6 (ENSSPAG00000005166)	PLPP6 (ENSSPAG00000005193)	MYOC (ENSSPAG00000005203)	ENSSPAG00000005213	ENSSPAG00000005225	ENSSPAG00000005316	dab1b (ENSSPAG00000005373)	c8b (ENSSPAG00000005410)	C8A (ENSSPAG00000005426)	si:ch211-188c16.1 (ENSSPAG00000005444)	PLPP3 (ENSSPAG00000005469)	ENSSPAG00000005493 #22	pgap6 (ENSSPAG00000005502)	rgs11 (ENSSPAG00000005523)	ints15 (ENSSPAG00000005548)	tfr1a (ENSSPAG00000005560)	ENSSPAG00000005594
Percomorphaceae_C	ANCESTRAL SPECIES	6	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Eupercaria	ANCESTRAL SPECIES	22	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Tetraodontidae	ANCESTRAL SPECIES	13	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000169365	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Fugu	MODERN SPECIES	14	ENSTRUG00000000725	ENSTRUG00000031511	angptl1b (ENSTRUG00000009057)	TADA1 (ENSTRUG00000023912)	JUN (ENSTRUG00000022103)	fggy (ENSTRUG00000008696)	PRDX6 (ENSTRUG00000026630)	PLPP6 (ENSTRUG00000008550)	MYOC (ENSTRUG00000022578)	ENSTRUG00000007216	ENSTRUG00000007127	dab1b (ENSTRUG00000028473)	c8b (ENSTRUG00000006173)	si:ch211-188c16.1 (ENSTRUG00000020979)	PLPP3 (ENSTRUG00000005209)	ENSTRUG00000027844 #22	pgap6 (ENSTRUG00000004905)	rgs11 (ENSTRUG00000003932)	ints15 (ENSTRUG00000003705)	tfr1a (ENSTRUG00000002063)	ENSTRUG00000001594	ENSTRUG00000022898	ENSTRUG00000002735	ENSTRUG00000031688	mkxb (ENSTRUG00000026882)	rab18b (ENSTRUG00000004283)	ENSTRUG00000004544	yme1l1b (ENSTRUG00000004667)	ENSTRUG00000005139	abi1b (ENSTRUG00000005181)	anxa13l (ENSTRUG00000025644)
Eupecaria_A	ANCESTRAL SPECIES	8	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Ballan wrasse	MODERN SPECIES	10	ENSLBEG00000011586	angptl1b (ENSLBEG00000011629)	TADA1 (ENSLBEG00000011694)	JUN (ENSLBEG00000011747)	fggy (ENSLBEG00000011807)	PRDX6 (ENSLBEG00000011871)	PLPP6 (ENSLBEG00000011905)	MYOC (ENSLBEG00000011921)	ENSLBEG00000011951	ENSLBEG00000012114	dab1b (ENSLBEG00000012262)	c8b (ENSLBEG00000012405)	C8A (ENSLBEG00000012433)	si:ch211-188c16.1 (ENSLBEG00000012481)	PLPP3 (ENSLBEG00000012526)	ENSLBEG00000012565 #22	pgap6 (ENSLBEG00000012587)	rgs11 (ENSLBEG00000012640)
Eupecaria_B	ANCESTRAL SPECIES	8	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Perciformes	ANCESTRAL SPECIES	5	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Perciformes_a	ANCESTRAL SPECIES	24	ENSGT00940000156906.j.a.b	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Channel bull blenny	MODERN SPECIES	8	ENSCGOG00000015385	ENSCGOG00000015379	angptl1b (ENSCGOG00000015378)	TADA1 (ENSCGOG00000015364)	fggy (ENSCGOG00000015180)	ENSCGOG00000015170	ENSCGOG00000015169	MYOC (ENSCGOG00000015168)	ENSCGOG00000010723	ENSCGOG00000010618	dab1b (ENSCGOG00000010597)	c8b (ENSCGOG00000010587)	C8A (ENSCGOG00000010584)	si:ch211-188c16.1 (ENSCGOG00000010578)	PLPP3 (ENSCGOG00000010479)	ENSCGOG00000010475 #22	pgap6 (ENSCGOG00000010465)	rgs11 (ENSCGOG00000010354)	ints15 (ENSCGOG00000010349)	tfr1a (ENSCGOG00000010323)	ENSCGOG00000010307	ENSCGOG00000010299	ENSCGOG00000010293	ENSCGOG00000010261	mkxb (ENSCGOG00000018831)	rab18b (ENSCGOG00000018820)	ENSCGOG00000018818	yme1l1b (ENSCGOG00000018448)	ENSCGOG00000018427	ENSCGOG00000018424	abi1b (ENSCGOG00000017896)
Cottioidei	ANCESTRAL SPECIES	15	ENSGT00940000156906.j.a.b	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Lumpfish	MODERN SPECIES	8	ENSCLMG00005008960	ENSCLMG00005008891	angptl1b (ENSCLMG00005008752)	TADA1 (ENSCLMG00005008749)	JUN (ENSCLMG00005008748)	fggy (ENSCLMG00005008505)	PRDX6 (ENSCLMG00005008499)	MYOC (ENSCLMG00005008498)	ENSCLMG00005008352	ENSCLMG00005008329	dab1b (ENSCLMG00005008327)	c8b (ENSCLMG00005008323)	C8A (ENSCLMG00005008321)	si:ch211-188c16.1 (ENSCLMG00005008320)	PLPP3 (ENSCLMG00005008319)	ENSCLMG00005008318 #22	pgap6 (ENSCLMG00005008317)	rgs11 (ENSCLMG00005007847)	ints15 (ENSCLMG00005007839)	tfr1a (ENSCLMG00005007754)	ENSCLMG00005007751	ENSCLMG00005007747	ENSCLMG00005007745	ENSCLMG00005007694	mkxb (ENSCLMG00005007692)	rab18b (ENSCLMG00005007680)	PTCHD3 (ENSCLMG00005007676)	yme1l1b (ENSCLMG00005003674)	ENSCLMG00005003641	abi1b (ENSCLMG00005003633)	APBB1IP (ENSCLMG00005003632)
Eupecaria_C	ANCESTRAL SPECIES	10	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	8	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000177628	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b
European seabass	MODERN SPECIES		ENSDLAG00005014082	ENSDLAG00005014072	ENSDLAG00005013779	ENSDLAG00005002762	ENSDLAG00005030891	ENSDLAG00005030998	ENSDLAG00005013507	ENSDLAG00005013478	ENSDLAG00005033511	ENSDLAG00005013460	ENSDLAG00005009996	ENSDLAG00005009898	C8B (ENSDLAG00005009624)	ENSDLAG00005009602	ENSDLAG00005027142	ENSDLAG00005027160 #22	ENSDLAG00005008642	ENSDLAG00005029963	ENSDLAG00005021781	tfr1a (ENSDLAG00005034612)	tfr1a (ENSDLAG00005033065)	ENSDLAG00005008531	ENSDLAG00005008497	ENSDLAG00005008485	ENSDLAG00005007524	mkxb (ENSDLAG00005007499)	rab18b (ENSDLAG00005007397)	ENSDLAG00005007378	yme1l1b (ENSDLAG00005005743)	ENSDLAG00005005651	ENSDLAG00005005492
Large yellow croaker	MODERN SPECIES	483	ENSLCRG00005006070	angptl1b (ENSLCRG00005006480)	TADA1 (ENSLCRG00005006481)	JUN (ENSLCRG00005006484)	fggy (ENSLCRG00005006493)	PRDX6 (ENSLCRG00005006582)	PLPP6 (ENSLCRG00005006584)	MYOC (ENSLCRG00005006587)	DNM3 (ENSLCRG00005006592)	ENSLCRG00005006876	dab1b (ENSLCRG00005006877)	c8b (ENSLCRG00005006879)	C8A (ENSLCRG00005006888)	si:ch211-188c16.1 (ENSLCRG00005006904)	PLPP3 (ENSLCRG00005006905)	ENSLCRG00005006907 #22	pgap6 (ENSLCRG00005006909)	rgs11 (ENSLCRG00005006914)	ints15 (ENSLCRG00005007459)	tfr1a (ENSLCRG00005007461)	ENSLCRG00005007472	ENSLCRG00005007483	ENSLCRG00005007486	ENSLCRG00005007492	ENSLCRG00005008407	rab18b (ENSLCRG00005008411)	prmt1 (ENSLCRG00005008428)	AP2A1 (ENSLCRG00005009075)	ENSLCRG00005009189	rras (ENSLCRG00005009191)	prrg2 (ENSLCRG00005009199)
Gilthead seabream	MODERN SPECIES	13	ENSSAUG00010013796	angptl1b (ENSSAUG00010013868)	TADA1 (ENSSAUG00010013873)	fggy (ENSSAUG00010013904)	JUN (ENSSAUG00010014318)	PRDX6 (ENSSAUG00010014321)	PLPP6 (ENSSAUG00010014323)	MYOC (ENSSAUG00010014326)	ENSSAUG00010014338	ENSSAUG00010014544	dab1b (ENSSAUG00010014550)	c8b (ENSSAUG00010014553)	C8A (ENSSAUG00010014593)	si:ch211-188c16.1 (ENSSAUG00010014597)	PLPP3 (ENSSAUG00010014603)	ENSSAUG00010014610 #22	pgap6 (ENSSAUG00010014619)	RGS11 (ENSSAUG00010006412)	ints15 (ENSSAUG00010006433)	tfr1a (ENSSAUG00010006443)	ENSSAUG00010006922	ENSSAUG00010006935	ENSSAUG00010006943	ENSSAUG00010006948	ENSSAUG00010006953	ENSSAUG00010006955	ENSSAUG00010007002	mkxb (ENSSAUG00010008367)	rab18b (ENSSAUG00010008371)	PTCHD3 (ENSSAUG00010008387)	yme1l1b (ENSSAUG00010008423)
Percomorphaceae_D	ANCESTRAL SPECIES	6	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Carangaria	ANCESTRAL SPECIES	5	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Carangaria_A	ANCESTRAL SPECIES	2	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Seriola	ANCESTRAL SPECIES		ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Greater amberjack	MODERN SPECIES	83	ENSSDUG00000007146	angptl1b (ENSSDUG00000007128)	TADA1 (ENSSDUG00000007094)	JUN (ENSSDUG00000007077)	fggy (ENSSDUG00000006976)	ENSSDUG00000006936	PLPP6 (ENSSDUG00000006927)	MYOC (ENSSDUG00000006904)	ENSSDUG00000006828	ENSSDUG00000006780	dab1b (ENSSDUG00000006742)	c8b (ENSSDUG00000006589)	C8A (ENSSDUG00000006517)	si:ch211-188c16.1 (ENSSDUG00000006420)	PLPP3 (ENSSDUG00000006378)	ENSSDUG00000006367 #22	pgap6 (ENSSDUG00000006350)	rgs11 (ENSSDUG00000006316)	ints15 (ENSSDUG00000006284)	tfr1a (ENSSDUG00000006251)	tfr1a (ENSSDUG00000006229)	ENSSDUG00000006092	ENSSDUG00000006048	ENSSDUG00000006025	ENSSDUG00000005996	mkxb (ENSSDUG00000005982)	rab18b (ENSSDUG00000005960)	PTCHD3 (ENSSDUG00000005940)	yme1l1b (ENSSDUG00000005852)	ENSSDUG00000005800	abi1b (ENSSDUG00000005740)
Yellowtail amberjack	MODERN SPECIES	3040		angptl1b (ENSSLDG00000007040)	JUN (ENSSLDG00000007000)	TADA1 (ENSSLDG00000006964)	fggy (ENSSLDG00000006897)	ENSSLDG00000006871	PLPP6 (ENSSLDG00000006856)	MYOC (ENSSLDG00000006845)	ENSSLDG00000006673	ENSSLDG00000006607	dab1b (ENSSLDG00000006559)	c8b (ENSSLDG00000006536)	C8A (ENSSLDG00000006509)	si:ch211-188c16.1 (ENSSLDG00000006478)	PLPP3 (ENSSLDG00000006434)	ENSSLDG00000006410 #22	pgap6 (ENSSLDG00000006397)	rgs11 (ENSSLDG00000006307)	ints15 (ENSSLDG00000006257)	ENSSLDG00000006239	ENSSLDG00000006235	ENSSLDG00000006204	ENSSLDG00000006163	ENSSLDG00000006149	ENSSLDG00000006124	ENSSLDG00000006065	mkxb (ENSSLDG00000006044)	rab18b (ENSSLDG00000006014)	ENSSLDG00000005968	yme1l1b (ENSSLDG00000005884)	ENSSLDG00000005846
Pleuronectoidei	ANCESTRAL SPECIES	1	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F.l	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000155764.B	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370.n	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Tongue sole	MODERN SPECIES	12	ENSCSEG00000018131	ENSCSEG00000018146	TTC39C (ENSCSEG00000018159)	ENSCSEG00000018209	fggy (ENSCSEG00000018217)	PLPP6 (ENSCSEG00000018238)	MYOC (ENSCSEG00000018249)	dnm3a (ENSCSEG00000018281)	ENSCSEG00000018296	ENSCSEG00000018298	dab1b (ENSCSEG00000018313)	c8b (ENSCSEG00000018337)	C8A (ENSCSEG00000018354)	si:ch211-188c16.1 (ENSCSEG00000018362)	PLPP3 (ENSCSEG00000018379)	ENSCSEG00000018384 #22	pgap6 (ENSCSEG00000018393)	rgs11 (ENSCSEG00000018404)	ints15 (ENSCSEG00000018432)	tfr1a (ENSCSEG00000018440)	ENSCSEG00000018456	ENSCSEG00000018481	carmil3 (ENSCSEG00000018515)	ENSCSEG00000018540	rem2 (ENSCSEG00000018544)	ENSCSEG00000018552	TGM1 (ENSCSEG00000018559)	abhd4 (ENSCSEG00000018573)	dad1 (ENSCSEG00000018581)	ENSCSEG00000018601	anxa13l (ENSCSEG00000018618)
Anabantaria	ANCESTRAL SPECIES	8	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Anabantoidei	ANCESTRAL SPECIES	18	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b #22	ENSGT00940000160060	ENSGT00940000160198	ENSGT00390000011370	ENSGT01030000234598.a.a.a.b	ENSGT00940000165248	ENSGT01100000263502.A.a.a.b.a.b	ENSGT00440000037780.b	ENSGT00940000156232.a	ENSGT00940000156227.e	ENSGT00940000157325	ENSGT00940000158727.b.a.b	ENSGT00550000074836.o	ENSGT00940000156350.g	ENSGT00940000154811.B.a.b	ENSGT00940000156105.k.b
Siamese fighting fish	MODERN SPECIES	8	ENSBSLG00000013237	angptl1b (ENSBSLG00000013502)	TADA1 (ENSBSLG00000013512)	ENSBSLG00000013535	fggy (ENSBSLG00000013587)	ENSBSLG00000013929	PLPP6 (ENSBSLG00000013938)	MYOC (ENSBSLG00000013947)	ENSBSLG00000013964	ENSBSLG00000014410	dab1b (ENSBSLG00000014796)	c8b (ENSBSLG00000014847)	C8A (ENSBSLG00000015040)	ENSBSLG00000015162	PLPP3 (ENSBSLG00000015211)	ENSBSLG00000015242 #22	cirbpa (ENSBSLG00000015274)	NDUFA13 (ENSBSLG00000015368)	GATAD2A (ENSBSLG00000015403)	MAU2 (ENSBSLG00000015435)	ARMC6 (ENSBSLG00000016599)	SLC25A42 (ENSBSLG00000016665)	ENSBSLG00000016783	tm6sf2a (ENSBSLG00000017014)	ENSBSLG00000017114	PRKAB2 (ENSBSLG00000017381)	ENSBSLG00000017453	eeig2a (ENSBSLG00000018184)	ENSBSLG00000018238	ENSBSLG00000018277	ENSBSLG00000018330
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	5	ENSGT00390000005496	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.b	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00490000043472	ENSGT00390000008549	ENSGT00610000087472	ENSGT00390000016298.b	ENSGT00390000010922	ENSGT00510000049371	ENSGT00390000007658	ENSGT00530000063790.a.c #22	ENSGT00940000167622	ENSGT00940000177205	ENSGT00940000163583	ENSGT00940000155151.b.d.b	ENSGT00940000157892.o	ENSGT00390000017398	ENSGT01030000234635.a.a.a.a.c	ENSGT00940000156924	ENSGT00950000183036.a.a.g	ENSGT01050000244941.B.d.g	ENSGT00940000163785.b
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	24	ENSSFOG00015029462	tmed5 (ENSSFOG00015029871)	ENSSFOG00015001869	mysm1 (ENSSFOG00015001852)	ENSSFOG00015001844	DAB1 (ENSSFOG00015001799)	PRKAA2 (ENSSFOG00015033063)	PLPP3 (ENSSFOG00015001691)	ENSSFOG00015001398	PCSK9 (ENSSFOG00015000263)	bsnd (ENSSFOG00015000216)	ENSSFOG00015030116	pars2 (ENSSFOG00015000170)	ttc4 (ENSSFOG00015000155)	TTC22 (ENSSFOG00015000104)	lurap1 (ENSSFOG00015021841) #22	ENSSFOG00015021838	ENSSFOG00015029857	ccn1 (ENSSFOG00015021810)	DDAH1 (ENSSFOG00015031069)	zgc:65873 (ENSSFOG00015021776)	SYDE2 (ENSSFOG00015021765)	DNAI3 (ENSSFOG00015021746)	MCOLN3 (ENSSFOG00015027729)	lurap1 (ENSSFOG00015028685) #22	ENSSFOG00015032083	ENSSFOG00015025693	ccn1 (ENSSFOG00015032652)	DDAH1 (ENSSFOG00015025117)	zgc:65873 (ENSSFOG00015025926)	SYDE2 (ENSSFOG00015031292)
Asian bonytongue	MODERN SPECIES	24	PCSK9 (ENSSFOG00015000263)	bsnd (ENSSFOG00015000216)	ENSSFOG00015030116	pars2 (ENSSFOG00015000170)	ttc4 (ENSSFOG00015000155)	TTC22 (ENSSFOG00015000104)	lurap1 (ENSSFOG00015021841) #22	ENSSFOG00015021838	ENSSFOG00015029857	ccn1 (ENSSFOG00015021810)	DDAH1 (ENSSFOG00015031069)	zgc:65873 (ENSSFOG00015021776)	SYDE2 (ENSSFOG00015021765)	DNAI3 (ENSSFOG00015021746)	MCOLN3 (ENSSFOG00015027729)	lurap1 (ENSSFOG00015028685) #22	ENSSFOG00015032083	ENSSFOG00015025693	ccn1 (ENSSFOG00015032652)	DDAH1 (ENSSFOG00015025117)	zgc:65873 (ENSSFOG00015025926)	SYDE2 (ENSSFOG00015031292)	DNAI3 (ENSSFOG00015024577)	MCOLN3 (ENSSFOG00015021732)	lpar3 (ENSSFOG00015021723)	adgrl4 (ENSSFOG00015021705)	ENSSFOG00015021688	ADGRL2 (ENSSFOG00015021664)	ttll7 (ENSSFOG00015021593)	ENSSFOG00015025219	samd13 (ENSSFOG00015031748)
P. kingsleyae	MODERN SPECIES	462									PCSK9 (ENSPKIG00000001404)	bsnd (ENSPKIG00000001386)	si:dkeyp-51f12.2 (ENSPKIG00000001367)	ENSPKIG00000001354	pars2 (ENSPKIG00000001336)	ttc4 (ENSPKIG00000001315)	TTC22 (ENSPKIG00000001299)	lurap1 (ENSPKIG00000001285) #22	ENSPKIG00000001270	ENSPKIG00000001254	ENSPKIG00000001234	ccn1 (ENSPKIG00000001209)	DDAH1 (ENSPKIG00000001160)	zgc:65873 (ENSPKIG00000001140)	SYDE2 (ENSPKIG00000025411)
Osteoglossiformes	ANCESTRAL SPECIES	301	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00950000183161.b	ENSGT00940000158561.d	ENSGT00390000015399	ENSGT00940000155214.l	ENSGT00390000013502.a.b	ENSGT00940000158038.a	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00390000005889	ENSGT00940000159474	ENSGT00390000008338	ENSGT00530000063790.a.d #22
Asian bonytongue	MODERN SPECIES	18	TADA1 (ENSSFOG00015014390)	ENSSFOG00015029370	fggy (ENSSFOG00015014449)	PRRC2C (ENSSFOG00015014551)	myoc (ENSSFOG00015014597)	itpa (ENSSFOG00015014644)	ENSSFOG00015014683	ENSSFOG00015014767	DAB1 (ENSSFOG00015014836)	c8b (ENSSFOG00015014943)	C8A (ENSSFOG00015015192)	PLPP3 (ENSSFOG00015015220)	bloc1s2 (ENSSFOG00015015255)	USP24 (ENSSFOG00015015291)	dhcr24 (ENSSFOG00015015424)	lurap1 (ENSSFOG00015032439) #22	ODF2L (ENSSFOG00015015461)	ZNHIT6 (ENSSFOG00015027928)	ccn1 (ENSSFOG00015015529)	DDAH1 (ENSSFOG00015015568)	ENSSFOG00015030629	ENSSFOG00015015615	MCOLN3 (ENSSFOG00015015628)	mcoln2 (ENSSFOG00015015658)	lpar3 (ENSSFOG00015031106)	ssx2ipa (ENSSFOG00015015720)	GNG5 (ENSSFOG00015015736)	SAMD13 (ENSSFOG00015015773)	prkacbb (ENSSFOG00015031970)	ENSSFOG00015006161	ENSSFOG00015015995
P. kingsleyae	MODERN SPECIES	17	ENSPKIG00000002727	DDAH1 (ENSPKIG00000002698)	ccn1 (ENSPKIG00000002680)	ENSPKIG00000002657	ENSPKIG00000002640	ODF2L (ENSPKIG00000002567)	DAB1 (ENSPKIG00000002310)	c8b (ENSPKIG00000002158)	C8A (ENSPKIG00000002126)	si:ch211-188c16.1 (ENSPKIG00000002090)	PLPP3 (ENSPKIG00000002028)	bloc1s2 (ENSPKIG00000001971)	USP24 (ENSPKIG00000001856)	dhcr24 (ENSPKIG00000001778)	ENSPKIG00000001741	lurap1 (ENSPKIG00000001725) #22	ENSPKIG00000001642	OSBPL9 (ENSPKIG00000001482)	ONECUT3 (ENSPKIG00000001423)	ENSPKIG00000001410	ENSPKIG00000001389	marchf2 (ENSPKIG00000001364)	hnrnpm (ENSPKIG00000001332)	CTXN1 (ENSPKIG00000001312)	ENSPKIG00000001257	ARHGEF18 (ENSPKIG00000001069)	ENSPKIG00000000920	use1 (ENSPKIG00000000876)	mfsd14a2 (ENSPKIG00000000844)	ENSPKIG00000000729	CERS1 (ENSPKIG00000000675)
Spotted gar	MODERN SPECIES	648	ZNHIT6 (ENSLOCG00000005376)	ccn1 (ENSLOCG00000005392)	DDAH1 (ENSLOCG00000005404)	ENSLOCG00000005418	zgc:65873 (ENSLOCG00000005440)	SYDE2 (ENSLOCG00000005452)	DNAI3 (ENSLOCG00000005471)	MCOLN3 (ENSLOCG00000005502)	mcoln2 (ENSLOCG00000005533)	LPAR3 (ENSLOCG00000005571)	ENSLOCG00000005586	ssx2ipa (ENSLOCG00000005611)	ENSLOCG00000005628	ENSLOCG00000005652	ENSLOCG00000005669	lurap1 (ENSLOCG00000005689) #22	pomgnt1 (ENSLOCG00000005707) #21	TSPAN1 (ENSLOCG00000005739) #20	PIK3R3 (ENSLOCG00000005759) ##18	MAST2 (ENSLOCG00000005784) #17	ENSLOCG00000005801 ##17	ENSLOCG00000005820	IPP (ENSLOCG00000005843) #16	tmem69 (ENSLOCG00000005866) #14	GPBP1L1 (ENSLOCG00000005900) #12	ENSLOCG00000005921	nasp (ENSLOCG00000005955) #10	akr1a1b (ENSLOCG00000005983) #7	prdx1 (ENSLOCG00000006005)	ENSLOCG00000006033	aldh9a1a.1 (ENSLOCG00000006045)
Reedfish	MODERN SPECIES	1	ENSECRG00000017546	jun (ENSECRG00000017576)	fggy (ENSECRG00000017595)	ENSECRG00000017623	hook1 (ENSECRG00000017656)	ENSECRG00000017799	ENSECRG00000019799	ENSECRG00000019817	ENSECRG00000019927	ENSECRG00000020984	ENSECRG00000021012	ENSECRG00000021045	cyp2v1 (ENSECRG00000021263)	ENSECRG00000021479	ENSECRG00000021576	lurap1 (ENSECRG00000021602) #22	pomgnt1 (ENSECRG00000021615) #21	TSPAN1 (ENSECRG00000021630) #20	pik3r3b (ENSECRG00000021645) #18	MAST2 (ENSECRG00000021663) #17	ENSECRG00000021696	IPP (ENSECRG00000021711) #16	tmem69 (ENSECRG00000021727) #14	GPBP1L1 (ENSECRG00000021742) #12	ENSECRG00000021772	ENSECRG00000021779	ENSECRG00000021791	ENSECRG00000021798	ENSECRG00000021804	ENSECRG00000021811	ENSECRG00000021818
Elephant shark	MODERN SPECIES	1559	ENSCMIG00000008827	dph2 (ENSCMIG00000008830)	ENSCMIG00000008832	ENSCMIG00000008836	rps8a (ENSCMIG00000008846)	KIF2C (ENSCMIG00000008872)	coa7 (ENSCMIG00000008880)	zyg11 (ENSCMIG00000008890)	echdc2 (ENSCMIG00000008908)	tmem53 (ENSCMIG00000008920)	ARMH1 (ENSCMIG00000008924)	IPO13 (ENSCMIG00000008946)	ENSCMIG00000009104	ENSCMIG00000009267	ebna1bp2 (ENSCMIG00000009308)	lurap1 (ENSCMIG00000009312) #22	pomgnt1 (ENSCMIG00000009351) #21	TSPAN1 (ENSCMIG00000009522) #20	pik3r3b (ENSCMIG00000009637) #18	MAST2 (ENSCMIG00000009962) #17	ENSCMIG00000010166	IPP (ENSCMIG00000010168) #16	tmem69 (ENSCMIG00000010171) #14	GPBP1L1 (ENSCMIG00000010173) #12	ENSCMIG00000010180	ENSCMIG00000010182	NASP (ENSCMIG00000010185) #10	akr1a1b (ENSCMIG00000010205) #7	prdx1 (ENSCMIG00000010227)	plpp3 (ENSCMIG00000010232)	MUTYH (ENSCMIG00000010246)