Gnathostomata	ANCESTRAL SPECIES	262													ENSGT00940000155757	ENSGT01010000222287.B.a.b.a	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00940000163514.C	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846 #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30
Euteleostomi	ANCESTRAL SPECIES	31	ENSGT00390000006705	ENSGT00940000171141	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154311.a.b	ENSGT00940000154311.a.a.a.b	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30
Sarcopterygii	ANCESTRAL SPECIES	14	ENSGT00940000171141	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT00970000197574	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00940000155539.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00390000008042.A.b #26	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000178790	ENSGT00940000165152	ENSGT00940000169408	ENSGT00940000161072	ENSGT00390000009029
Tetrapoda	ANCESTRAL SPECIES	32												ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00940000155539.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b
Amniota	ANCESTRAL SPECIES	6	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000178790	ENSGT00940000165152	ENSGT00940000169408	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364
Mammalia	ANCESTRAL SPECIES	6	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d
Theria	ANCESTRAL SPECIES	5	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000155984	ENSGT00940000159862
Eutheria	ANCESTRAL SPECIES	10	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000155984	ENSGT00940000159862
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Primates	ANCESTRAL SPECIES	13	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00910000147009
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00490000043417	ENSGT00910000147620	ENSGT00390000001170 #7	ENSGT00910000147097	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00490000043417	ENSGT00910000147620	ENSGT00390000001170 #7	ENSGT00910000147097	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00910000147097	ENSGT00940000153470.a.a.a.a #8	ENSGT00390000011864.o.b	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00910000147620	ENSGT00390000001170 #7	ENSGT00910000147097	ENSGT00940000153470.a.a.a.a #8	ENSGT00390000011864.o.b	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00390000001170 #7	ENSGT00910000147097	ENSGT00940000153470.a.a.a.a #8	ENSGT00390000011864.o.b	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00910000147551	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Macaca	ANCESTRAL SPECIES	15	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00390000011864.o.b	ENSGT00530000063607.b #10	ENSGT01030000235139 #11	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00910000147551	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00940000166898.a.a.b.b.a.a.b.b.b.a #9	ENSGT00530000063607.b #10	ENSGT01030000235139 #11	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Rhesus	MODERN SPECIES	3	TMEM163 (ENSMMUG00000059634) #7	MGAT5 (ENSMMUG00000010563) #8	ENSMMUG00000056889 #9	NCKAP5 (ENSMMUG00000045491) #10	ENSMMUG00000045065 #11	LYPD1 (ENSMMUG00000058920) #12	ENSMMUG00000016960 #13	GPR39 (ENSMMUG00000016115) #14	SLC35F5 (ENSMMUG00000008875) #15	ACTR3 (ENSMMUG00000015032) #16	DPP10 (ENSMMUG00000021403) #17	ENSMMUG00000055362 #18	ENSMMUG00000054335 #19	DDX18 (ENSMMUG00000021343) #20	CCDC93 (ENSMMUG00000039116) #21	INSIG2 (ENSMMUG00000006354) #22	EN1 (ENSMMUG00000057382) #23	MARCO (ENSMMUG00000002610) #24	C1QL2 (ENSMMUG00000016545) #25	STEAP3 (ENSMMUG00000039972) #26	C12H2orf76 (ENSMMUG00000062492) #27	DBI (ENSMMUG00000011126) #28	TMEM37 (ENSMMUG00000060725) #29	SCTR (ENSMMUG00000011128) #30	CFAP221 (ENSMMUG00000011129) #31	TMEM177 (ENSMMUG00000006446) #32	PTPN4 (ENSMMUG00000005610) #33	EPB41L5 (ENSMMUG00000001244) #34	ENSMMUG00000051751 #35	ENSMMUG00000059504 #36	TMEM185B (ENSMMUG00000063759) #37
Crab-eating macaque	MODERN SPECIES	3	TMEM163 (ENSMFAG00000004027) #7	MGAT5 (ENSMFAG00000002058) #8	ENSMFAG00000055532 #9	NCKAP5 (ENSMFAG00000035593) #10	LYPD1 (ENSMFAG00000033924) #12	ENSMFAG00000055082	ENSMFAG00000054954	GPR39 (ENSMFAG00000041717) #14	SLC35F5 (ENSMFAG00000001843) #15	ACTR3 (ENSMFAG00000041594) #16	DPP10 (ENSMFAG00000004071) #17	ENSMFAG00000063408	DDX18 (ENSMFAG00000043075) #20	ENSMFAG00000045805	CCDC93 (ENSMFAG00000038632) #21	INSIG2 (ENSMFAG00000033044) #22	EN1 (ENSMFAG00000039390) #23	MARCO (ENSMFAG00000037627) #24	C1QL2 (ENSMFAG00000034573) #25	STEAP3 (ENSMFAG00000002842) #26	ENSMFAG00000002195 #27	TMEM37 (ENSMFAG00000028075) #29	ENSMFAG00000051758 ##28	SCTR (ENSMFAG00000003037) #30	CFAP221 (ENSMFAG00000026339) #31	TMEM177 (ENSMFAG00000049249) #32	ENSMFAG00000044614	PTPN4 (ENSMFAG00000037071) #33	EPB41L5 (ENSMFAG00000000388) #34	TMEM185B (ENSMFAG00000016061) #37	ENSMFAG00000060262
Pig-tailed macaque	MODERN SPECIES	192	CCNT2 (ENSMNEG00000042821)	ACMSD (ENSMNEG00000028900)	TMEM163 (ENSMNEG00000032280) #7	MGAT5 (ENSMNEG00000035554) #8	ENSMNEG00000042204	NCKAP5 (ENSMNEG00000040558) #10	LYPD1 (ENSMNEG00000016693) #12	GPR39 (ENSMNEG00000038370) #14	SLC35F5 (ENSMNEG00000028365) #15	ACTR3 (ENSMNEG00000012040) #16	ENSMNEG00000018068	DPP10 (ENSMNEG00000034709) #17	DDX18 (ENSMNEG00000032172) #20	ENSMNEG00000045112	CCDC93 (ENSMNEG00000033714) #21	INSIG2 (ENSMNEG00000002739) #22	EN1 (ENSMNEG00000031846) #23	MARCO (ENSMNEG00000030671) #24	C1QL2 (ENSMNEG00000028903) #25	STEAP3 (ENSMNEG00000036721) #26	C2orf76 (ENSMNEG00000005955) #27	DBI (ENSMNEG00000028613) #28	TMEM37 (ENSMNEG00000041781) #29	SCTR (ENSMNEG00000044503) #30	CFAP221 (ENSMNEG00000035728) #31	TMEM177 (ENSMNEG00000041079) #32	PTPN4 (ENSMNEG00000035285) #33	EPB41L5 (ENSMNEG00000031588) #34	TMEM185B (ENSMNEG00000003238) #37	RALB (ENSMNEG00000042744)	ENSMNEG00000041834
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00390000001170 #7	ENSGT00910000147097	ENSGT00940000153470.a.a.a.a #8	ENSGT00390000011864.o.b	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00910000147551	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Olive baboon	MODERN SPECIES	1	MGAT5 (ENSPANG00000018425) #8	ENSPANG00000006778	NCKAP5 (ENSPANG00000019274) #10	LYPD1 (ENSPANG00000018831) #12	ENSPANG00000035353 #11	GPR39 (ENSPANG00000003759) #14	SLC35F5 (ENSPANG00000023058) #15	ACTR3 (ENSPANG00000011576) #16	ENSPANG00000037349	ENSPANG00000038746 ##35	DPP10 (ENSPANG00000019222) #17	ENSPANG00000038641	DDX18 (ENSPANG00000019899) #20	ENSPANG00000032709	CCDC93 (ENSPANG00000022335) #21	INSIG2 (ENSPANG00000024543) #22	EN1 (ENSPANG00000030296) #23	C1QL2 (ENSPANG00000000800) #25	STEAP3 (ENSPANG00000019298) #26	ENSPANG00000007242 #27	ENSPANG00000010073 #28	TMEM37 (ENSPANG00000004964) #29	SCTR (ENSPANG00000012987) #30	CFAP221 (ENSPANG00000006516) #31	TMEM177 (ENSPANG00000048408) #32	PTPN4 (ENSPANG00000005006) #33	EPB41L5 (ENSPANG00000022430) #34	TMEM185B (ENSPANG00000038960) #37	RALB (ENSPANG00000019898)	ENSPANG00000030077	INHBB (ENSPANG00000041444)
Cercopithecinae_d	ANCESTRAL SPECIES	149													ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000153095.g.b.a.a.a.a	ENSGT00940000156332 #34	ENSGT00940000163000 #37
Drill	MODERN SPECIES	871													DDX18 (ENSMLEG00000038065) #20	ENSMLEG00000035866	CCDC93 (ENSMLEG00000029873) #21	INSIG2 (ENSMLEG00000031649) #22	ENSMLEG00000035636	MARCO (ENSMLEG00000034132) #24	C1QL2 (ENSMLEG00000033421) #25	STEAP3 (ENSMLEG00000037794) #26	C2orf76 (ENSMLEG00000039378) #27	DBI (ENSMLEG00000001896) #28	TMEM37 (ENSMLEG00000033060) #29	SCTR (ENSMLEG00000029227) #30	CFAP221 (ENSMLEG00000042134) #31	ENSMLEG00000041704 #32	PTPN4 (ENSMLEG00000040178) #33	ENSMLEG00000039838	EPB41L5 (ENSMLEG00000032344) #34	ENSMLEG00000027991 #37	RALB (ENSMLEG00000008823)
Sooty mangabey	MODERN SPECIES	129													DDX18 (ENSCATG00000036838) #20	ENSCATG00000036756	CCDC93 (ENSCATG00000041614) #21	INSIG2 (ENSCATG00000040525) #22	EN1 (ENSCATG00000040038) #23	MARCO (ENSCATG00000008042) #24	C1QL2 (ENSCATG00000041576) #25	STEAP3 (ENSCATG00000039809) #26	C2orf76 (ENSCATG00000031880) #27	ENSCATG00000041961 #28	TMEM37 (ENSCATG00000029551) #29	SCTR (ENSCATG00000035610) #30	ENSCATG00000032201	CFAP221 (ENSCATG00000020702) #31	ENSCATG00000014934 #32	ENSCATG00000012333	PTPN4 (ENSCATG00000030920) #33	ENSCATG00000035581	EPB41L5 (ENSCATG00000040081) #34
Vervet Monkey	MODERN SPECIES	1	CCNT2 (ENSCSAG00000016413)	ACMSD (ENSCSAG00000016419)	TMEM163 (ENSCSAG00000016424) #7	MGAT5 (ENSCSAG00000016433) #8	NCKAP5 (ENSCSAG00000016447) #10	LYPD1 (ENSCSAG00000016451) #12	GPR39 (ENSCSAG00000018643) #14	SLC35F5 (ENSCSAG00000016458) #15	ACTR3 (ENSCSAG00000016462) #16	ENSCSAG00000018642	ENSCSAG00000016467	DPP10 (ENSCSAG00000016475) #17	ENSCSAG00000016482	DDX18 (ENSCSAG00000016508) #20	CCDC93 (ENSCSAG00000016529) #21	INSIG2 (ENSCSAG00000016534) #22	EN1 (ENSCSAG00000016540) #23	MARCO (ENSCSAG00000016551) #24	C1QL2 (ENSCSAG00000016560) #25	STEAP3 (ENSCSAG00000016563) #26	C2orf76 (ENSCSAG00000016566) #27	ENSCSAG00000016572 ##28	TMEM37 (ENSCSAG00000018641) #29	SCTR (ENSCSAG00000016598) #30	CFAP221 (ENSCSAG00000016617) #31	TMEM177 (ENSCSAG00000018640) #32	PTPN4 (ENSCSAG00000016630) #33	EPB41L5 (ENSCSAG00000016641) #34	TMEM185B (ENSCSAG00000018639) #37	RALB (ENSCSAG00000016644)	INHBB (ENSCSAG00000016648)
Rhinopithecus	ANCESTRAL SPECIES	224															ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a.d #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Black snub-nosed monkey	MODERN SPECIES	2438															CCDC93 (ENSRBIG00000043000) #21	INSIG2 (ENSRBIG00000029052) #22	ENSRBIG00000038781
Golden snub-nosed monkey	MODERN SPECIES	1011															CCDC93 (ENSRROG00000030822) #21	INSIG2 (ENSRROG00000018968) #22	EN1 (ENSRROG00000027037) #23	MARCO (ENSRROG00000031873) #24	C1QL2 (ENSRROG00000037069) #25	STEAP3 (ENSRROG00000018795) #26	C2orf76 (ENSRROG00000035405) #27	ENSRROG00000004303	DBI (ENSRROG00000011622) #28	TMEM37 (ENSRROG00000029778) #29	SCTR (ENSRROG00000043131) #30	ENSRROG00000028132
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147097	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Hominidae	ANCESTRAL SPECIES	17	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14										ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Homo/Pan group	ANCESTRAL SPECIES	13									ENSGT00940000156551.g	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Pan	ANCESTRAL SPECIES	12									ENSGT00940000156551.g	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00910000146971	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Bonobo	MODERN SPECIES	15										SLC35F5 (ENSPPAG00000006288) #15	ACTR3 (ENSPPAG00000040697) #16	DPP10 (ENSPPAG00000025416) #17	DDX18 (ENSPPAG00000033473) #20	ENSPPAG00000028222	CCDC93 (ENSPPAG00000039658) #21	INSIG2 (ENSPPAG00000033913) #22	ENSPPAG00000033812	MARCO (ENSPPAG00000038285) #24	C1QL2 (ENSPPAG00000035484) #25	STEAP3 (ENSPPAG00000029473) #26	C2orf76 (ENSPPAG00000041702) #27	DBI (ENSPPAG00000038470) #28	TMEM37 (ENSPPAG00000039178) #29	SCTR (ENSPPAG00000011217) #30	CFAP221 (ENSPPAG00000026562) #31	ENSPPAG00000032632 #32	ENSPPAG00000038871	PTPN4 (ENSPPAG00000007018) #33	EPB41L5 (ENSPPAG00000037104) #34	ENSPPAG00000030838 #37	RALB (ENSPPAG00000035798)
Chimpanzee	MODERN SPECIES	15									RABL2A (ENSPTRG00000014555)	SLC35F5 (ENSPTRG00000012387) #15	ENSPTRG00000046744	DPP10 (ENSPTRG00000012390) #17	DDX18 (ENSPTRG00000012391) #20	ENSPTRG00000051641	CCDC93 (ENSPTRG00000012394) #21	INSIG2 (ENSPTRG00000012395) #22	EN1 (ENSPTRG00000016137) #23	MARCO (ENSPTRG00000012397) #24	C1QL2 (ENSPTRG00000012398) #25	STEAP3 (ENSPTRG00000012399) #26	C2orf76 (ENSPTRG00000012400) #27	DBI (ENSPTRG00000012401) #28	TMEM37 (ENSPTRG00000042156) #29	SCTR (ENSPTRG00000012403) #30	CFAP221 (ENSPTRG00000012404) #31	ENSPTRG00000045331 #32	ENSPTRG00000047573	PTPN4 (ENSPTRG00000012406) #33	EPB41L5 (ENSPTRG00000012408) #34	TMEM185B (ENSPTRG00000044584) #37	RALB (ENSPTRG00000050663)
Human	MODERN SPECIES	11	IL36B (ENSG00000136696)	IL36RN (ENSG00000136695)	IL1F10 (ENSG00000136697)	IL1RN (ENSG00000136689)	PSD4 (ENSG00000125637)	PAX8 (ENSG00000125618)	IGKV1OR2-108 (ENSG00000231292)	ZNG1B (ENSG00000136682)	FOXD4L1 (ENSG00000184492)	RABL2A (ENSG00000144134)	SLC35F5 (ENSG00000115084) #15	ACTR3 (ENSG00000115091) #16	DPP10 (ENSG00000175497) #17	DDX18 (ENSG00000088205) #20	CCDC93 (ENSG00000125633) #21	INSIG2 (ENSG00000125629) #22	EN1 (ENSG00000163064) #23	MARCO (ENSG00000019169) #24	C1QL2 (ENSG00000144119) #25	STEAP3 (ENSG00000115107) #26	C2orf76 (ENSG00000186132) #27	DBI (ENSG00000155368) #28	TMEM37 (ENSG00000171227) #29	SCTR (ENSG00000080293) #30	CFAP221 (ENSG00000163075) #31	TMEM177 (ENSG00000144120) #32	PTPN4 (ENSG00000088179) #33	EPB41L5 (ENSG00000115109) #34	TMEM185B (ENSG00000226479) #37	RALB (ENSG00000144118)	INHBB (ENSG00000163083)
Gorilla	MODERN SPECIES	15	IL36B (ENSGGOG00000015995)	IL36RN (ENSGGOG00000041708)	IL1F10 (ENSGGOG00000009415)	IL1RN (ENSGGOG00000038739)	PSD4 (ENSGGOG00000004574)	ENSGGOG00000004587	ENSGGOG00000039313	ENSGGOG00000037637	ENSGGOG00000038564	SLC35F5 (ENSGGOG00000003680) #15	ACTR3 (ENSGGOG00000011346) #16	DPP10 (ENSGGOG00000011936) #17	DDX18 (ENSGGOG00000028420) #20	ENSGGOG00000002919	CCDC93 (ENSGGOG00000002922) #21	INSIG2 (ENSGGOG00000015868) #22	EN1 (ENSGGOG00000024767) #23	MARCO (ENSGGOG00000015585) #24	C1QL2 (ENSGGOG00000012460) #25	STEAP3 (ENSGGOG00000012147) #26	C2orf76 (ENSGGOG00000000842) #27	ENSGGOG00000010372 #28	TMEM37 (ENSGGOG00000010383) #29	SCTR (ENSGGOG00000010385) #30	CFAP221 (ENSGGOG00000015489) #31	ENSGGOG00000042665 #32	ENSGGOG00000038500	PTPN4 (ENSGGOG00000003104) #33	EPB41L5 (ENSGGOG00000005823) #34	ENSGGOG00000037010 #37	RALB (ENSGGOG00000001648)
Orangutan	MODERN SPECIES	15	RAB3GAP1 (ENSPPYG00000012813)	MAP3K19 (ENSPPYG00000012812)	CCNT2 (ENSPPYG00000012811)	ACMSD (ENSPPYG00000012810)	ENSPPYG00000041744	TMEM163 (ENSPPYG00000012809) #7	MGAT5 (ENSPPYG00000012808) #8	NCKAP5 (ENSPPYG00000012806) #10	LYPD1 (ENSPPYG00000038777) #12	GPR39 (ENSPPYG00000012804) #14	SLC35F5 (ENSPPYG00000012799) #15	ACTR3 (ENSPPYG00000036644) #16	DPP10 (ENSPPYG00000012797) #17	DDX18 (ENSPPYG00000012796) #20	CCDC93 (ENSPPYG00000012795) #21	INSIG2 (ENSPPYG00000037275) #22	EN1 (ENSPPYG00000012793) #23	MARCO (ENSPPYG00000012792) #24	C1QL2 (ENSPPYG00000030288) #25	STEAP3 (ENSPPYG00000040240) #26	C2BH2orf76 (ENSPPYG00000012789) #27	ENSPPYG00000012788 #28	TMEM37 (ENSPPYG00000030402) #29	SCTR (ENSPPYG00000012786) #30	CFAP221 (ENSPPYG00000012785) #31	TMEM177 (ENSPPYG00000040727) #32	ENSPPYG00000040596	PTPN4 (ENSPPYG00000012784) #33	EPB41L5 (ENSPPYG00000012783) #34	TMEM185B (ENSPPYG00000033591) #37	RALB (ENSPPYG00000012781)
Gibbon	MODERN SPECIES	12	MAP3K19 (ENSNLEG00000008465)	CCNT2 (ENSNLEG00000008432)	ACMSD (ENSNLEG00000008409)	TMEM163 (ENSNLEG00000008393) #7	ENSNLEG00000032873	MGAT5 (ENSNLEG00000008354) #8	NCKAP5 (ENSNLEG00000008327) #10	LYPD1 (ENSNLEG00000008321) #12	GPR39 (ENSNLEG00000008318) #14	SLC35F5 (ENSNLEG00000011590) #15	ACTR3 (ENSNLEG00000011619) #16	DPP10 (ENSNLEG00000011663) #17	DDX18 (ENSNLEG00000011769) #20	ENSNLEG00000031890	CCDC93 (ENSNLEG00000011818) #21	INSIG2 (ENSNLEG00000011862) #22	ENSNLEG00000011873	ENSNLEG00000011874 #23	MARCO (ENSNLEG00000011875) #24	STEAP3 (ENSNLEG00000010277) #26	C2orf76 (ENSNLEG00000028895) #27	ENSNLEG00000010290 #28	TMEM37 (ENSNLEG00000030043) #29	SCTR (ENSNLEG00000010307) #30	CFAP221 (ENSNLEG00000010316) #31	TMEM177 (ENSNLEG00000031534) #32	ENSNLEG00000027828	PTPN4 (ENSNLEG00000000805) #33	EPB41L5 (ENSNLEG00000000875) #34	ENSNLEG00000033832 #37	RALB (ENSNLEG00000000919)
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147097	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.b.a ##28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00550000074831.d	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00550000074972.f.a
Cebidae	ANCESTRAL SPECIES	11	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147097	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.g.a.a.a ##20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.b.a ##28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00550000074831.d	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00550000074972.f.a
Marmoset	MODERN SPECIES	18	ENSCJAG00000085696	NCKAP5 (ENSCJAG00000014208) #10	ENSCJAG00000056495 #12	GPR39 (ENSCJAG00000014203) #14	ENSCJAG00000059169	SLC35F5 (ENSCJAG00000014139) #15	ENSCJAG00000079195	ACTR3 (ENSCJAG00000014091) #16	DPP10 (ENSCJAG00000014051) #17	ENSCJAG00000080269	ENSCJAG00000084423 ##18	ENSCJAG00000021414 #20	ENSCJAG00000087131	ENSCJAG00000021415	CCDC93 (ENSCJAG00000021418) #21	INSIG2 (ENSCJAG00000021424) #22	EN1 (ENSCJAG00000041223) #23	MARCO (ENSCJAG00000021426) #24	C1QL2 (ENSCJAG00000040759) #25	STEAP3 (ENSCJAG00000021433) #26	C2orf76 (ENSCJAG00000057183) #27	ENSCJAG00000080731 ##28	TMEM37 (ENSCJAG00000032138) #29	SCTR (ENSCJAG00000021438) #30	CFAP221 (ENSCJAG00000021440) #31	TMEM177 (ENSCJAG00000080051) #32	PTPN4 (ENSCJAG00000013214) #33	ENSCJAG00000073015	ENSCJAG00000082465	EPB41L5 (ENSCJAG00000013283) #34	TMEM185B (ENSCJAG00000004108) #37
Cebidae_a	ANCESTRAL SPECIES	27	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147097	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037.h #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.k.b.a ##28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00550000074831.d	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00550000074972.f.a
Bolivian squirrel monkey	MODERN SPECIES	87	TMEM163 (ENSSBOG00000022375) #7	ENSSBOG00000034190	MGAT5 (ENSSBOG00000033065) #8	NCKAP5 (ENSSBOG00000031984) #10	LYPD1 (ENSSBOG00000027244) #12	GPR39 (ENSSBOG00000035138) #14	SLC35F5 (ENSSBOG00000034983) #15	ACTR3 (ENSSBOG00000024821) #16	ENSSBOG00000014385	DPP10 (ENSSBOG00000025183) #17	ENSSBOG00000022831	ENSSBOG00000018990	ENSSBOG00000026304 ##20	ENSSBOG00000024815	CCDC93 (ENSSBOG00000028952) #21	INSIG2 (ENSSBOG00000027976) #22	ENSSBOG00000023327	MARCO (ENSSBOG00000021263) #24	C1QL2 (ENSSBOG00000022318) #25	STEAP3 (ENSSBOG00000030743) #26	C2orf76 (ENSSBOG00000034915) #27	ENSSBOG00000034654 ##28	TMEM37 (ENSSBOG00000026372) #29	SCTR (ENSSBOG00000006054) #30	CFAP221 (ENSSBOG00000023657) #31	ENSSBOG00000022754 #32	ENSSBOG00000027599	PTPN4 (ENSSBOG00000026744) #33	EPB41L5 (ENSSBOG00000032246) #34	ENSSBOG00000015265 #37	ENSSBOG00000032472
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	264													DDX18 (ENSCCAG00000023595) #20	ENSCCAG00000021824	CCDC93 (ENSCCAG00000029341) #21	ENSCCAG00000029759 #22	EN1 (ENSCCAG00000025559) #23	MARCO (ENSCCAG00000022782) #24	C1QL2 (ENSCCAG00000021464) #25	STEAP3 (ENSCCAG00000022436) #26	C2orf76 (ENSCCAG00000027500) #27	ENSCCAG00000026944 ##28	TMEM37 (ENSCCAG00000018260) #29	SCTR (ENSCCAG00000022567) #30	CFAP221 (ENSCCAG00000030888) #31	ENSCCAG00000027740 #32	ENSCCAG00000018864	PTPN4 (ENSCCAG00000022945) #33	EPB41L5 (ENSCCAG00000035288) #34	ENSCCAG00000032365	ENSCCAG00000033995 #37
Capuchin	MODERN SPECIES	85	C17orf50 (ENSCCAG00000024927)	GAS2L2 (ENSCCAG00000025203)	RASL10B (ENSCCAG00000029475)	AP2B1 (ENSCCAG00000035115)	PEX12 (ENSCCAG00000022946)	SLFN14 (ENSCCAG00000024954)	SLFN11 (ENSCCAG00000013862)	SLFN5 (ENSCCAG00000033924)	UNC45B (ENSCCAG00000020566)	NLE1 (ENSCCAG00000030907)	FNDC8 (ENSCCAG00000021053)	RAD51D (ENSCCAG00000022233)	RFFL (ENSCCAG00000015388)	LIG3 (ENSCCAG00000004189)	CCT6B (ENSCCAG00000033971)	ENSCCAG00000025546 #22	TMEM132E (ENSCCAG00000032199)	ENSCCAG00000027028	ENSCCAG00000006712	CCL8 (ENSCCAG00000030231)	CCL11 (ENSCCAG00000028564)	CCL7 (ENSCCAG00000030103)	CCL2 (ENSCCAG00000019141)	ENSCCAG00000032285	ENSCCAG00000026038	ENSCCAG00000022043	SMG1 (ENSCCAG00000023693)	ENSCCAG00000023215	TMC7 (ENSCCAG00000022773)	COQ7 (ENSCCAG00000020051)	ITPRIPL2 (ENSCCAG00000003884)
Mas night monkey	MODERN SPECIES	1247	ENSANAG00000036144	TMEM163 (ENSANAG00000030205) #7	MGAT5 (ENSANAG00000035860) #8	ENSANAG00000034286	NCKAP5 (ENSANAG00000030595) #10	LYPD1 (ENSANAG00000023563) #12	GPR39 (ENSANAG00000036901) #14	ENSANAG00000036342	SLC35F5 (ENSANAG00000029152) #15	ACTR3 (ENSANAG00000030124) #16	DPP10 (ENSANAG00000037130) #17	ENSANAG00000037489 #20	ENSANAG00000028399	CCDC93 (ENSANAG00000024755) #21	ENSANAG00000036273	INSIG2 (ENSANAG00000021170) #22	EN1 (ENSANAG00000035250) #23	MARCO (ENSANAG00000036056) #24	C1QL2 (ENSANAG00000030662) #25	STEAP3 (ENSANAG00000008427) #26	C2orf76 (ENSANAG00000021190) #27	ENSANAG00000038433 ##28	TMEM37 (ENSANAG00000034529) #29	SCTR (ENSANAG00000028043) #30	CFAP221 (ENSANAG00000030979) #31	ENSANAG00000037319 #32	ENSANAG00000021459	PTPN4 (ENSANAG00000038024) #33	EPB41L5 (ENSANAG00000021697) #34	ENSANAG00000021804 #37	ENSANAG00000028366
Tarsier	MODERN SPECIES	7122															CCDC93 (ENSTSYG00000013914) #21	INSIG2 (ENSTSYG00000008449) #22
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949.c #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949.c #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.j #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Mouse lemur	MODERN SPECIES	30	THSD7B (ENSMICG00000047887)	HNMT (ENSMICG00000042723)	ENSMICG00000036028	NXPH2 (ENSMICG00000045401)	ENSMICG00000007371	LRP1B (ENSMICG00000014855)	ENSMICG00000017770	GPR39 (ENSMICG00000031291) #14	SLC35F5 (ENSMICG00000010476) #15	ENSMICG00000033065 #16	DPP10 (ENSMICG00000032720) #17	ENSMICG00000039700	ENSMICG00000047072 #20	ENSMICG00000017591	CCDC93 (ENSMICG00000017592) #21	INSIG2 (ENSMICG00000046615) #22	EN1 (ENSMICG00000042501) #23	ENSMICG00000017595	ENSMICG00000033839 #25	ENSMICG00000000288 #26	C2orf76 (ENSMICG00000037028) #27	DBI (ENSMICG00000026878) #28	TMEM37 (ENSMICG00000000295) #29	SCTR (ENSMICG00000000297) #30	CFAP221 (ENSMICG00000017212) #31	ENSMICG00000011011	ENSMICG00000034038	ENSMICG00000017224 #32	PTPN4 (ENSMICG00000046058) #33	EPB41L5 (ENSMICG00000000936) #34	ENSMICG00000009529
Lemuriformes_a	ANCESTRAL SPECIES	171													ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.j #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Greater bamboo lemur	MODERN SPECIES	349													DDX18 (ENSPSMG00000018883) #20	ENSPSMG00000018887	CCDC93 (ENSPSMG00000018957) #21	INSIG2 (ENSPSMG00000018981) #22	EN1 (ENSPSMG00000018986) #23	MARCO (ENSPSMG00000018997) #24	C1QL2 (ENSPSMG00000019000) #25	STEAP3 (ENSPSMG00000019026) #26	ENSPSMG00000019038	C2orf76 (ENSPSMG00000019045) #27	DBI (ENSPSMG00000019058) #28	TMEM37 (ENSPSMG00000019062) #29	SCTR (ENSPSMG00000019084) #30	CFAP221 (ENSPSMG00000019117) #31	ENSPSMG00000019123 #32
Coquerels sifaka	MODERN SPECIES	316												ENSPCOG00000020647	DDX18 (ENSPCOG00000016210) #20	ENSPCOG00000023319	CCDC93 (ENSPCOG00000013184) #21	INSIG2 (ENSPCOG00000023425) #22	EN1 (ENSPCOG00000028441) #23	MARCO (ENSPCOG00000022240) #24	C1QL2 (ENSPCOG00000026057) #25	STEAP3 (ENSPCOG00000025504) #26	C2orf76 (ENSPCOG00000024285) #27	ENSPCOG00000023484 #28	TMEM37 (ENSPCOG00000021830) #29	SCTR (ENSPCOG00000014550) #30	CFAP221 (ENSPCOG00000023409) #31	ENSPCOG00000018625 #32	PTPN4 (ENSPCOG00000018249) #33	EPB41L5 (ENSPCOG00000018944) #34	ENSPCOG00000021737 #37	RALB (ENSPCOG00000027317)	INHBB (ENSPCOG00000018863)
Bushbaby	MODERN SPECIES	174													DPP10 (ENSOGAG00000009135) #17	DDX18 (ENSOGAG00000007237) #20	CCDC93 (ENSOGAG00000007245) #21	INSIG2 (ENSOGAG00000007739) #22	EN1 (ENSOGAG00000030888) #23	MARCO (ENSOGAG00000013990) #24	C1QL2 (ENSOGAG00000016188) #25	STEAP3 (ENSOGAG00000008768) #26	C2orf76 (ENSOGAG00000008647) #27	TMEM37 (ENSOGAG00000034872) #29	SCTR (ENSOGAG00000000593) #30	CFAP221 (ENSOGAG00000014557) #31	TMEM177 (ENSOGAG00000028409) #32	ENSOGAG00000034783	ENSOGAG00000026207	PTPN4 (ENSOGAG00000007431) #33	EPB41L5 (ENSOGAG00000007435) #34	TMEM185B (ENSOGAG00000007439) #37	RALB (ENSOGAG00000015936)
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Tree shrew	MODERN SPECIES	5774													DDX18 (ENSTBEG00000016543) #20	ENSTBEG00000016742	CCDC93 (ENSTBEG00000016746) #21	INSIG2 (ENSTBEG00000017015) #22
Glires	ANCESTRAL SPECIES	14	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Lagomorpha	ANCESTRAL SPECIES	12	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Rabbit	MODERN SPECIES	18	TMEM163 (ENSOCUG00000011107) #7	MGAT5 (ENSOCUG00000011096) #8	NCKAP5 (ENSOCUG00000000184) #10	LYPD1 (ENSOCUG00000000182) #12	GPR39 (ENSOCUG00000000181) #14	ENSOCUG00000014530	SLC35F5 (ENSOCUG00000013099) #15	ACTR3 (ENSOCUG00000004395) #16	ENSOCUG00000030005	DPP10 (ENSOCUG00000008378) #17	ENSOCUG00000025480	ENSOCUG00000031080	DDX18 (ENSOCUG00000012586) #20	ENSOCUG00000016884	CCDC93 (ENSOCUG00000005932) #21	INSIG2 (ENSOCUG00000005251) #22	EN1 (ENSOCUG00000011901) #23	MARCO (ENSOCUG00000006893) #24	STEAP3 (ENSOCUG00000013423) #26	ENSOCUG00000004561 #27	DBI (ENSOCUG00000004566) #28	TMEM37 (ENSOCUG00000017907) #29	SCTR (ENSOCUG00000007710) #30	CFAP221 (ENSOCUG00000010082) #31	TMEM177 (ENSOCUG00000023441) #32	PTPN4 (ENSOCUG00000008364) #33	ENSOCUG00000034792	EPB41L5 (ENSOCUG00000008381) #34	TMEM185B (ENSOCUG00000033247) #37	RALB (ENSOCUG00000005992)	INHBB (ENSOCUG00000005094)
Pika	MODERN SPECIES	5089														DDX18 (ENSOPRG00000001701) #20	CCDC93 (ENSOPRG00000001729) #21	INSIG2 (ENSOPRG00000001767) #22
Rodentia	ANCESTRAL SPECIES	14	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Hystricomorpha	ANCESTRAL SPECIES	20	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332.d.b #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Naked mole-rat female	MODERN SPECIES	22	INPP1 (ENSHGLG00000032929)	HIBCH (ENSHGLG00000002337)	ENSHGLG00000044500	ENSHGLG00000007656 #16	ENSHGLG00000042578	ENSHGLG00000005121 #17	ENSHGLG00000047626	ENSHGLG00000038322	ENSHGLG00000040375	ENSHGLG00000010182	ENSHGLG00000044680	ENSHGLG00000034383	DDX18 (ENSHGLG00000016324) #20	ENSHGLG00000042944	ENSHGLG00000016311 #21	INSIG2 (ENSHGLG00000048151) #22	EN1 (ENSHGLG00000008502) #23	MARCO (ENSHGLG00000007212) #24	C1QL2 (ENSHGLG00000005027) #25	ENSHGLG00000047186	STEAP3 (ENSHGLG00000041983) #26	C2orf76 (ENSHGLG00000017852) #27	ENSHGLG00000017824 #28	ENSHGLG00000015203	TMEM37 (ENSHGLG00000015189) #29	SCTR (ENSHGLG00000014846) #30	CFAP221 (ENSHGLG00000016525) #31	ENSHGLG00000012507	TMEM177 (ENSHGLG00000014801) #32	PTPN4 (ENSHGLG00000008471) #33	ENSHGLG00000035501
Hystricomorpha_a	ANCESTRAL SPECIES	17	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332.d.b #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Hystricomorpha_b	ANCESTRAL SPECIES	67	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332.d.b #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Degu	DUPLICATION
Degu	MODERN SPECIES	55	ENSODEG00000007582	ENSODEG00000007263	LYPD1 (ENSODEG00000006977) #12	ENSODEG00000006743	GPR39 (ENSODEG00000007476) #14	ENSODEG00000007110	ENSODEG00000008310 #15	ENSODEG00000008133	ENSODEG00000006746 #16	ENSODEG00000019411	DPP10 (ENSODEG00000007040) #17	ENSODEG00000007261	ENSODEG00000009186	DDX18 (ENSODEG00000007330) #20	CCDC93 (ENSODEG00000006407) #21	ENSODEG00000008015 #22	ENSODEG00000007637	EN1 (ENSODEG00000007479) #23	MARCO (ENSODEG00000009185) #24	C1QL2 (ENSODEG00000007608) #25	STEAP3 (ENSODEG00000007304) #26	C2orf76 (ENSODEG00000006814) #27	DBI (ENSODEG00000006339) #28	TMEM37 (ENSODEG00000009992) #29	SCTR (ENSODEG00000006551) #30	ENSODEG00000006994	ENSODEG00000019281	ENSODEG00000019384	ENSODEG00000007074	PTPN4 (ENSODEG00000007828) #33	ENSODEG00000007483 #34
Degu	MODERN SPECIES	88	ENSODEG00000007051	ENSODEG00000006640	ENSODEG00000005318	LGR5 (ENSODEG00000005026)	ENSODEG00000005914	PTPRR (ENSODEG00000004892)	PTPRB (ENSODEG00000005212)	ENSODEG00000004686	KCNMB4 (ENSODEG00000004677)	CNOT2 (ENSODEG00000004532)	ENSODEG00000004175	BEST3 (ENSODEG00000004391)	LRRC10 (ENSODEG00000004356)	FRS2 (ENSODEG00000004174)	ENSODEG00000019177	ENSODEG00000005231 #22	ENSODEG00000005050	LYZ (ENSODEG00000004742)	ENSODEG00000004658	ENSODEG00000004418	ENSODEG00000004291	ENSODEG00000004028	SLC35E3 (ENSODEG00000004570)	NUP107 (ENSODEG00000004100)	RAP1B (ENSODEG00000004031)	DYRK2 (ENSODEG00000008824)	ENSODEG00000008629	ENSODEG00000019564	CAND1 (ENSODEG00000006531)	ENSODEG00000006471	GRIP1 (ENSODEG00000004813)
Long-tailed chinchilla	MODERN SPECIES	166										SLC35F5 (ENSCLAG00000002345) #15	ACTR3 (ENSCLAG00000005698) #16	DPP10 (ENSCLAG00000004961) #17	DDX18 (ENSCLAG00000004684) #20	ENSCLAG00000004250	CCDC93 (ENSCLAG00000004008) #21	INSIG2 (ENSCLAG00000003631) #22	ENSCLAG00000003601 #23	MARCO (ENSCLAG00000003783) #24	C1QL2 (ENSCLAG00000002797) #25	STEAP3 (ENSCLAG00000002741) #26	ENSCLAG00000002520 #27	DBI (ENSCLAG00000002481) #28	TMEM37 (ENSCLAG00000004567) #29	SCTR (ENSCLAG00000003965) #30	CFAP221 (ENSCLAG00000003127) #31	TMEM177 (ENSCLAG00000002898) #32	PTPN4 (ENSCLAG00000002781) #33	EPB41L5 (ENSCLAG00000002942) #34	ENSCLAG00000002685	RALB (ENSCLAG00000002612)	INHBB (ENSCLAG00000002594)
Guinea pig	DUPLICATION
Guinea pig	MODERN SPECIES	3	CCNT2 (ENSCPOG00000003960)	ACMSD (ENSCPOG00000003832)	TMEM163 (ENSCPOG00000004944) #7	MGAT5 (ENSCPOG00000004942) #8	NCKAP5 (ENSCPOG00000011594) #10	LYPD1 (ENSCPOG00000037678) #12	ENSCPOG00000020207	GPR39 (ENSCPOG00000004139) #14	SLC35F5 (ENSCPOG00000008212) #15	ENSCPOG00000032878	ACTR3 (ENSCPOG00000032478) #16	DPP10 (ENSCPOG00000004892) #17	DDX18 (ENSCPOG00000007532) #20	ENSCPOG00000000511	CCDC93 (ENSCPOG00000036417) #21	ENSCPOG00000036244 #22	EN1 (ENSCPOG00000014063) #23	MARCO (ENSCPOG00000003499) #24	C1QL2 (ENSCPOG00000025695) #25	STEAP3 (ENSCPOG00000006387) #26	C2orf76 (ENSCPOG00000038860) #27	DBI (ENSCPOG00000000415) #28	ENSCPOG00000019725	TMEM37 (ENSCPOG00000032025) #29	SCTR (ENSCPOG00000015317) #30	ENSCPOG00000004735	TMEM177 (ENSCPOG00000037867) #32	PTPN4 (ENSCPOG00000032764) #33	EPB41L5 (ENSCPOG00000003780) #34	RALB (ENSCPOG00000032717)	INHBB (ENSCPOG00000032914)
Guinea pig	MODERN SPECIES	52	WTIP (ENSCPOG00000036934)	ENSCPOG00000030617	ZNF8 (ENSCPOG00000031529)	RPS5 (ENSCPOG00000023995)	ZNF584 (ENSCPOG00000031428)	ENSCPOG00000021589	ENSCPOG00000039862	ZNF446 (ENSCPOG00000032178)	SLC27A5 (ENSCPOG00000012620)	ZBTB45 (ENSCPOG00000021221)	ENSCPOG00000005745	CHMP2A (ENSCPOG00000023920)	UBE2M (ENSCPOG00000026733)	MZF1 (ENSCPOG00000009921)	ENSCPOG00000027461	ENSCPOG00000036378 #22	MRPL39 (ENSCPOG00000025162)	JAM2 (ENSCPOG00000004699)	ATP5PF (ENSCPOG00000004703)	GABPA (ENSCPOG00000035074)	APP (ENSCPOG00000001427)	CYYR1 (ENSCPOG00000000968)	ADAMTS1 (ENSCPOG00000035904)	ADAMTS5 (ENSCPOG00000009911)	N6AMT1 (ENSCPOG00000030645)	LTN1 (ENSCPOG00000006815)	RWDD2B (ENSCPOG00000033672)	USP16 (ENSCPOG00000009390)	CCT8 (ENSCPOG00000009404)	MAP3K7CL (ENSCPOG00000035962)	BACH1 (ENSCPOG00000008737)
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352.h #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Marmotini	ANCESTRAL SPECIES	2					ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352.h #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Marmotini_b	ANCESTRAL SPECIES	10					ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b.i #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00940000155539.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352.h #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Arctic ground squirrel	MODERN SPECIES	462															CCDC93 (ENSUPAG00010012058) #21	INSIG2 (ENSUPAG00010012189) #22	EN1 (ENSUPAG00010012197) #23	ENSUPAG00010012205 #24	ENSUPAG00010012218	C1QL2 (ENSUPAG00010012225) #25	STEAP3 (ENSUPAG00010012231) #26	C2orf76 (ENSUPAG00010012272) #27	DBI (ENSUPAG00010012283) #28
Squirrel	MODERN SPECIES	69						MGAT5 (ENSSTOG00000004740) #8	NCKAP5 (ENSSTOG00000027624) #10	LYPD1 (ENSSTOG00000025677) #12	GPR39 (ENSSTOG00000022199) #14	SLC35F5 (ENSSTOG00000003270) #15	ACTR3 (ENSSTOG00000011414) #16	DPP10 (ENSSTOG00000014468) #17	DDX18 (ENSSTOG00000010541) #20	ENSSTOG00000010554	CCDC93 (ENSSTOG00000010558) #21	INSIG2 (ENSSTOG00000010764) #22	ENSSTOG00000021609 #23	C1QL2 (ENSSTOG00000021568) #25	STEAP3 (ENSSTOG00000008264) #26	C2orf76 (ENSSTOG00000006753) #27	DBI (ENSSTOG00000006759) #28	TMEM37 (ENSSTOG00000006768) #29	SCTR (ENSSTOG00000006773) #30	ENSSTOG00000032843	TMEM177 (ENSSTOG00000029730) #32	PTPN4 (ENSSTOG00000015978) #33	EPB41L5 (ENSSTOG00000015989) #34	TMEM185B (ENSSTOG00000020073) #37	RALB (ENSSTOG00000001208)	INHBB (ENSSTOG00000025873)	GLI2 (ENSSTOG00000004582)
Alpin marmot	MODERN SPECIES	75				ENSMMMG00000022750	TMEM163 (ENSMMMG00000022747) #7	MGAT5 (ENSMMMG00000022745) #8	NCKAP5 (ENSMMMG00000022713) #10	LYPD1 (ENSMMMG00000022706) #12	GPR39 (ENSMMMG00000022704) #14	SLC35F5 (ENSMMMG00000022698) #15	ACTR3 (ENSMMMG00000022696) #16	DPP10 (ENSMMMG00000022691) #17	DDX18 (ENSMMMG00000022676) #20	ENSMMMG00000022675	CCDC93 (ENSMMMG00000022668) #21	INSIG2 (ENSMMMG00000022666) #22	ENSMMMG00000022662 #24	C1QL2 (ENSMMMG00000022661) #25	STEAP3 (ENSMMMG00000022653) #26	C2orf76 (ENSMMMG00000022651) #27	DBI (ENSMMMG00000022647) #28	TMEM37 (ENSMMMG00000022646) #29	SCTR (ENSMMMG00000022635) #30	ENSMMMG00000022630	ENSMMMG00000022627 #31	TMEM177 (ENSMMMG00000022626) #32	PTPN4 (ENSMMMG00000022617) #33	EPB41L5 (ENSMMMG00000022584) #34	TMEM185B (ENSMMMG00000022582) #37	RALB (ENSMMMG00000022577)	ENSMMMG00000022576
Eurasian red squirrel	MODERN SPECIES	12	TMEM163 (ENSSVLG00005001446) #7	MGAT5 (ENSSVLG00005001430) #8	NCKAP5 (ENSSVLG00005001316) #10	LYPD1 (ENSSVLG00005001165) #12	GPR39 (ENSSVLG00005001131) #14	ENSSVLG00005001116	ENSSVLG00005001047 #15	ENSSVLG00005000990	ENSSVLG00005000959 #16	ENSSVLG00005000918	DPP10 (ENSSVLG00005000789) #17	ENSSVLG00005000672	ENSSVLG00005000638 #20	ENSSVLG00005000613	CCDC93 (ENSSVLG00005000586) #21	INSIG2 (ENSSVLG00005000562) #22	EN1 (ENSSVLG00005000531) #23	MARCO (ENSSVLG00005000500) #24	C1QL2 (ENSSVLG00005000478) #25	STEAP3 (ENSSVLG00005000464) #26	C2orf76 (ENSSVLG00005000450) #27	DBI (ENSSVLG00005000415) #28	TMEM37 (ENSSVLG00005000377) #29	SCTR (ENSSVLG00005000343) #30	CFAP221 (ENSSVLG00005000301) #31	TMEM177 (ENSSVLG00005000277) #32	ENSSVLG00005000270	PTPN4 (ENSSVLG00005000228) #33	EPB41L5 (ENSSVLG00005024139) #34	TMEM185B (ENSSVLG00005024068) #37	RALB (ENSSVLG00005024049)
Rodentia_B	ANCESTRAL SPECIES	41	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Myomorpha	ANCESTRAL SPECIES	54	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Muroidea	ANCESTRAL SPECIES	64	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Cricetidae	ANCESTRAL SPECIES	13	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.m #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	2	ENSCGRG00001024550	Tmem163 (ENSCGRG00001020380) #7	MGAT5 (ENSCGRG00001021442) #8	ENSCGRG00001004696	Nckap5 (ENSCGRG00001017969) #10	Lypd1 (ENSCGRG00001015904) #12	Gpr39 (ENSCGRG00001018849) #14	Slc35f5 (ENSCGRG00001020752) #15	Actr3 (ENSCGRG00001003441) #16	Dpp10 (ENSCGRG00001021005) #17	ENSCGRG00001007041	ENSCGRG00001012190	ENSCGRG00001010803 #20	Htr5b (ENSCGRG00001012462)	Ccdc93 (ENSCGRG00001019734) #21	Insig2 (ENSCGRG00001016199) #22	En1 (ENSCGRG00001020962) #23	Marco (ENSCGRG00001024756) #24	C1ql2 (ENSCGRG00001007909) #25	Steap3 (ENSCGRG00001009470) #26	ENSCGRG00001013961 #27	ENSCGRG00001016035 #28	Tmem37 (ENSCGRG00001002385) #29	Sctr (ENSCGRG00001005944) #30	Cfap221 (ENSCGRG00001022638) #31	Tmem177 (ENSCGRG00001004033) #32	Ptpn4 (ENSCGRG00001004410) #33	Epb41l5 (ENSCGRG00001018059) #34	Tmem185b (ENSCGRG00001005950) #37	Ralb (ENSCGRG00001018860)	Inhbb (ENSCGRG00001021419)
Chinese hamster chok1gshd	MODERN SPECIES	2	Baz1a (ENSCGRG00001013418)	ENSCGRG00001023351	2700097O09Rik (ENSCGRG00001023053)	ENSCGRG00001009525	ENSCGRG00001007854	ENSCGRG00001006281	ENSCGRG00001003022	Psma6 (ENSCGRG00001001597)	ENSCGRG00001024024	Aldoart2 (ENSCGRG00001002722)	Insm2 (ENSCGRG00001024873)	Ralgapa1 (ENSCGRG00001024774)	ENSCGRG00001024105	Brms1l (ENSCGRG00001022168)	Mbip (ENSCGRG00001020947)	ENSCGRG00001014830 #22	Nkx2-1 (ENSCGRG00001014035)	Nkx2-9 (ENSCGRG00001021293)	Pax9 (ENSCGRG00001020784)	Slc25a21 (ENSCGRG00001013187)	Mipol1 (ENSCGRG00001010153)	Foxa1 (ENSCGRG00001007733)	ENSCGRG00001006180	Ttc6 (ENSCGRG00001002787)	Sstr1 (ENSCGRG00001011700)	Clec14a (ENSCGRG00001008667)	ENSCGRG00001003851	ENSCGRG00001002230	Sec23a (ENSCGRG00001019639)	Gemin2 (ENSCGRG00001017720)	Trappc6b (ENSCGRG00001016994)
Golden Hamster	MODERN SPECIES	638	Slain1 (ENSMAUG00000007499)	Ednrb (ENSMAUG00000014682)	Pou4f1 (ENSMAUG00000012541)	Obi1 (ENSMAUG00000017917)	Rbm26 (ENSMAUG00000017566)	Ndfip2 (ENSMAUG00000013764)	Spry2 (ENSMAUG00000000469)	ENSMAUG00000016408	Slitrk1 (ENSMAUG00000006551)	Slitrk6 (ENSMAUG00000013249)	Slitrk5 (ENSMAUG00000003037)	Renbp (ENSMAUG00000015967)	Ddx18 (ENSMAUG00000015244) #20	Htr5b (ENSMAUG00000011414)	Ccdc93 (ENSMAUG00000011394) #21	Insig2 (ENSMAUG00000011633) #22	En1 (ENSMAUG00000005024) #23	Marco (ENSMAUG00000001107) #24	C1ql2 (ENSMAUG00000001451) #25	Steap3 (ENSMAUG00000012847) #26	ENSMAUG00000010977 #27	ENSMAUG00000012614 #28	Tmem37 (ENSMAUG00000003894) #29	Sctr (ENSMAUG00000018939) #30	ENSMAUG00000009794	Cfap221 (ENSMAUG00000008913) #31	Ptpn4 (ENSMAUG00000003161) #33	ENSMAUG00000016481 #34	Inhbb (ENSMAUG00000018944)	Gli2 (ENSMAUG00000008873)	Tfcp2l1 (ENSMAUG00000012650)
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Prairie vole	MODERN SPECIES	14	Map3k19 (ENSMOCG00000013038)	Ccnt2 (ENSMOCG00000002940)	Acmsd (ENSMOCG00000014467)	Tmem163 (ENSMOCG00000022463) #7	Mgat5 (ENSMOCG00000022128) #8	ENSMOCG00000015715 #10	Lypd1 (ENSMOCG00000012749) #12	Gpr39 (ENSMOCG00000014214) #14	Slc35f5 (ENSMOCG00000020193) #15	Actr3 (ENSMOCG00000016811) #16	ENSMOCG00000018044	Dpp10 (ENSMOCG00000018108) #17	ENSMOCG00000012842 #20	ENSMOCG00000022314	Ccdc93 (ENSMOCG00000014441) #21	Insig2 (ENSMOCG00000022239) #22	En1 (ENSMOCG00000021118) #23	Marco (ENSMOCG00000005754) #24	C1ql2 (ENSMOCG00000015563) #25	Steap3 (ENSMOCG00000008386) #26	ENSMOCG00000009556 #27	Dbi (ENSMOCG00000020761) #28	Tmem37 (ENSMOCG00000008468) #29	Sctr (ENSMOCG00000002265) #30	Cfap221 (ENSMOCG00000019701) #31	Tmem177 (ENSMOCG00000020308) #32	Ptpn4 (ENSMOCG00000019512) #33	Epb41l5 (ENSMOCG00000014769) #34	Ralb (ENSMOCG00000014139)	Inhbb (ENSMOCG00000023014)	Gli2 (ENSMOCG00000015946)
Northern American deer mouse	MODERN SPECIES	2	Ccnt2 (ENSPEMG00000020594)	Acmsd (ENSPEMG00000022800)	Tmem163 (ENSPEMG00000026492) #7	Mgat5 (ENSPEMG00000011505) #8	Nckap5 (ENSPEMG00000011621) #10	Lypd1 (ENSPEMG00000024961) #12	Gpr39 (ENSPEMG00000018261) #14	Slc35f5 (ENSPEMG00000016352) #15	Actr3 (ENSPEMG00000013664) #16	Dpp10 (ENSPEMG00000000215) #17	ENSPEMG00000026874	ENSPEMG00000031118	Ddx18 (ENSPEMG00000010438) #20	Htr5b (ENSPEMG00000008772)	Ccdc93 (ENSPEMG00000013504) #21	Insig2 (ENSPEMG00000011061) #22	ENSPEMG00000009245	Marco (ENSPEMG00000000377) #24	C1ql2 (ENSPEMG00000027803) #25	Steap3 (ENSPEMG00000023815) #26	ENSPEMG00000023706 #27	Dbi (ENSPEMG00000023060) #28	Tmem37 (ENSPEMG00000022811) #29	Sctr (ENSPEMG00000012122) #30	Cfap221 (ENSPEMG00000013124) #31	Tmem177 (ENSPEMG00000010461) #32	Ptpn4 (ENSPEMG00000016685) #33	Epb41l5 (ENSPEMG00000023844) #34	Tmem185b (ENSPEMG00000006946) #37	Ralb (ENSPEMG00000030915)	Inhbb (ENSPEMG00000029287)
Murinae	ANCESTRAL SPECIES	11	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Mus	ANCESTRAL SPECIES	5	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
spretus	MODERN SPECIES		Rab3gap1 (MGP_SPRETEiJ_G0015348)	Map3k19 (MGP_SPRETEiJ_G0015347)	Ccnt2 (MGP_SPRETEiJ_G0015346)	Acmsd (MGP_SPRETEiJ_G0015345)	Tmem163 (MGP_SPRETEiJ_G0015344) #7	Mgat5 (MGP_SPRETEiJ_G0015343) #8	Nckap5 (MGP_SPRETEiJ_G0015342) #10	Lypd1 (MGP_SPRETEiJ_G0015341) #12	Gpr39 (MGP_SPRETEiJ_G0015340) #14	Slc35f5 (MGP_SPRETEiJ_G0015339) #15	Actr3 (MGP_SPRETEiJ_G0015338) #16	Dpp10 (MGP_SPRETEiJ_G0015337) #17	Ddx18 (MGP_SPRETEiJ_G0015336) #20	Htr5b (MGP_SPRETEiJ_G0015335)	Ccdc93 (MGP_SPRETEiJ_G0015334) #21	Insig2 (MGP_SPRETEiJ_G0015333) #22	En1 (MGP_SPRETEiJ_G0015332) #23	Marco (MGP_SPRETEiJ_G0015331) #24	C1ql2 (MGP_SPRETEiJ_G0015330) #25	Steap3 (MGP_SPRETEiJ_G0015329) #26	MGP_SPRETEiJ_G0015328 #27	Dbi (MGP_SPRETEiJ_G0015327) #28	Tmem37 (MGP_SPRETEiJ_G0015326) #29	Sctr (MGP_SPRETEiJ_G0015325) #30	Cfap221 (MGP_SPRETEiJ_G0015324) #31	Tmem177 (MGP_SPRETEiJ_G0015323) #32	Ptpn4 (MGP_SPRETEiJ_G0015322) #33	Epb41l5 (MGP_SPRETEiJ_G0015321) #34	Tmem185b (MGP_SPRETEiJ_G0015320) #37	Ralb (MGP_SPRETEiJ_G0015319)	Inhbb (MGP_SPRETEiJ_G0015318)
Steppe mouse	MODERN SPECIES	3366										Dpp10 (ENSMSIG00000007267) #17	ENSMSIG00000007549	Ddx18 (ENSMSIG00000007574) #20	Htr5b (ENSMSIG00000007621)	ENSMSIG00000007637	Ccdc93 (ENSMSIG00000007650) #21	Insig2 (ENSMSIG00000007777) #22	ENSMSIG00000007824	En1 (ENSMSIG00000007841) #23	Marco (ENSMSIG00000007849) #24	C1ql2 (ENSMSIG00000007898) #25	Steap3 (ENSMSIG00000007914) #26	ENSMSIG00000007975 #27	ENSMSIG00000008032 #28	Tmem37 (ENSMSIG00000008095) #29	Sctr (ENSMSIG00000008107) #30	Cfap221 (ENSMSIG00000008192) #31	Tmem177 (ENSMSIG00000008258) #32	Ptpn4 (ENSMSIG00000008276) #33	Epb41l5 (ENSMSIG00000008644) #34	Tmem185b (ENSMSIG00000008782) #37	Ralb (ENSMSIG00000008787)
Mouse	MODERN SPECIES		Rab3gap1 (ENSMUSG00000036104)	Map3k19 (ENSMUSG00000051590)	Ccnt2 (ENSMUSG00000026349)	Acmsd (ENSMUSG00000026348)	Tmem163 (ENSMUSG00000026347) #7	Mgat5 (ENSMUSG00000036155) #8	Nckap5 (ENSMUSG00000049690) #10	Lypd1 (ENSMUSG00000026344) #12	Gpr39 (ENSMUSG00000026343) #14	Slc35f5 (ENSMUSG00000026342) #15	Actr3 (ENSMUSG00000026341) #16	Dpp10 (ENSMUSG00000036815) #17	Ddx18 (ENSMUSG00000001674) #20	Htr5b (ENSMUSG00000050534)	Ccdc93 (ENSMUSG00000026339) #21	Insig2 (ENSMUSG00000003721) #22	En1 (ENSMUSG00000058665) #23	Marco (ENSMUSG00000026390) #24	C1ql2 (ENSMUSG00000036907) #25	Steap3 (ENSMUSG00000026389) #26	3110009E18Rik (ENSMUSG00000026388)	Dbi (ENSMUSG00000026385) #28	Tmem37 (ENSMUSG00000050777) #29	Sctr (ENSMUSG00000026387) #30	Cfap221 (ENSMUSG00000036962) #31	Tmem177 (ENSMUSG00000036975) #32	Ptpn4 (ENSMUSG00000026384) #33	Epb41l5 (ENSMUSG00000026383) #34	Tmem185b (ENSMUSG00000098923) #37	Ralb (ENSMUSG00000004451)	Inhbb (ENSMUSG00000037035)
Ryukyu mouse	MODERN SPECIES		Rab3gap1 (MGP_CAROLIEiJ_G0014541)	Map3k19 (MGP_CAROLIEiJ_G0014540)	Ccnt2 (MGP_CAROLIEiJ_G0014539)	Acmsd (MGP_CAROLIEiJ_G0014538)	Tmem163 (MGP_CAROLIEiJ_G0014537) #7	Mgat5 (MGP_CAROLIEiJ_G0014536) #8	Nckap5 (MGP_CAROLIEiJ_G0014535) #10	Lypd1 (MGP_CAROLIEiJ_G0014534) #12	Gpr39 (MGP_CAROLIEiJ_G0014533) #14	Slc35f5 (MGP_CAROLIEiJ_G0014532) #15	Actr3 (MGP_CAROLIEiJ_G0014531) #16	Dpp10 (MGP_CAROLIEiJ_G0014530) #17	Ddx18 (MGP_CAROLIEiJ_G0014529) #20	Htr5b (MGP_CAROLIEiJ_G0014528)	Ccdc93 (MGP_CAROLIEiJ_G0014527) #21	Insig2 (MGP_CAROLIEiJ_G0014526) #22	En1 (MGP_CAROLIEiJ_G0014525) #23	Marco (MGP_CAROLIEiJ_G0014524) #24	C1ql2 (MGP_CAROLIEiJ_G0014523) #25	Steap3 (MGP_CAROLIEiJ_G0014522) #26	MGP_CAROLIEiJ_G0014521 #27	MGP_CAROLIEiJ_G0014520 #28	Tmem37 (MGP_CAROLIEiJ_G0014519) #29	MGP_CAROLIEiJ_G0014518 #30	Cfap221 (MGP_CAROLIEiJ_G0014517) #31	Tmem177 (MGP_CAROLIEiJ_G0014516) #32	Ptpn4 (MGP_CAROLIEiJ_G0014515) #33	Epb41l5 (MGP_CAROLIEiJ_G0014514) #34	Tmem185b (MGP_CAROLIEiJ_G0014513) #37	Ralb (MGP_CAROLIEiJ_G0014512)	Inhbb (MGP_CAROLIEiJ_G0014511)
Shrew mouse	MODERN SPECIES	18	Rab3gap1 (MGP_PahariEiJ_G0027777)	MGP_PahariEiJ_G0027776	Ccnt2 (MGP_PahariEiJ_G0027775)	Acmsd (MGP_PahariEiJ_G0027774)	Tmem163 (MGP_PahariEiJ_G0027773) #7	Mgat5 (MGP_PahariEiJ_G0027772) #8	Nckap5 (MGP_PahariEiJ_G0027771) #10	Lypd1 (MGP_PahariEiJ_G0027770) #12	Gpr39 (MGP_PahariEiJ_G0027769) #14	Slc35f5 (MGP_PahariEiJ_G0027768) #15	Actr3 (MGP_PahariEiJ_G0027767) #16	Dpp10 (MGP_PahariEiJ_G0027766) #17	Ddx18 (MGP_PahariEiJ_G0027765) #20	Htr5b (MGP_PahariEiJ_G0027764)	Ccdc93 (MGP_PahariEiJ_G0027763) #21	Insig2 (MGP_PahariEiJ_G0027762) #22	En1 (MGP_PahariEiJ_G0027761) #23	Marco (MGP_PahariEiJ_G0027760) #24	C1ql2 (MGP_PahariEiJ_G0027759) #25	Steap3 (MGP_PahariEiJ_G0027758) #26	MGP_PahariEiJ_G0027757 #27	Dbi (MGP_PahariEiJ_G0027756) #28	Tmem37 (MGP_PahariEiJ_G0027755) #29	MGP_PahariEiJ_G0027754 #30	Cfap221 (MGP_PahariEiJ_G0027753) #31	Tmem177 (MGP_PahariEiJ_G0027752) #32	Ptpn4 (MGP_PahariEiJ_G0027751) #33	Epb41l5 (MGP_PahariEiJ_G0027750) #34	Tmem185b (MGP_PahariEiJ_G0027749) #37	Ralb (MGP_PahariEiJ_G0027748)	Inhbb (MGP_PahariEiJ_G0027747)
Rat	MODERN SPECIES	4	Acmsd (ENSRNOG00000003884)	Tmem163 (ENSRNOG00000003769) #7	Mgat5 (ENSRNOG00000003614) #8	ENSRNOG00000066401	tuba1c-ps1 (ENSRNOG00000070079)	Nckap5 (ENSRNOG00000021553) #10	Lypd1 (ENSRNOG00000003453) #12	Gpr39 (ENSRNOG00000021586) #14	Slc35f5 (ENSRNOG00000003403) #15	LOC100362110 (ENSRNOG00000030481)	Actr3 (ENSRNOG00000003206) #16	Dpp10 (ENSRNOG00000002595) #17	LOC103690298 (ENSRNOG00000029868)	Htr5b (ENSRNOG00000002549)	Ccdc93 (ENSRNOG00000002514) #21	Insig2 (ENSRNOG00000002478) #22	Tpt1-ps1 (ENSRNOG00000069572)	En1 (ENSRNOG00000056580) #23	Marco (ENSRNOG00000049303) #24	C1ql2 (ENSRNOG00000046863) #25	Steap3 (ENSRNOG00000049471) #26	C13h2orf76 (ENSRNOG00000045570) #27	Dbi (ENSRNOG00000046889) #28	Tmem37 (ENSRNOG00000047714) #29	Sctr (ENSRNOG00000049766) #30	Cfap221 (ENSRNOG00000056781) #31	Tmem177 (ENSRNOG00000025484) #32	Ptpn4 (ENSRNOG00000002625) #33	Epb41l5 (ENSRNOG00000002538) #34	Tmem185b (ENSRNOG00000067956) #37	Ralb (ENSRNOG00000002440)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1146													Ddx18 (ENSNGAG00000005624) #20	Htr5b (ENSNGAG00000019120)	ENSNGAG00000018912 #21	Insig2 (ENSNGAG00000014068) #22	En1 (ENSNGAG00000003517) #23	ENSNGAG00000001400	Marco (ENSNGAG00000021338) #24	C1ql2 (ENSNGAG00000020975) #25	Steap3 (ENSNGAG00000019695) #26	ENSNGAG00000017975 #27	Dbi (ENSNGAG00000017044) #28
Lesser Egyptian jerboa	MODERN SPECIES	72	ENSJJAG00000016042	Arhgap12 (ENSJJAG00000022673)	ENSJJAG00000024357	Fzd8 (ENSJJAG00000013971)	Gjd4 (ENSJJAG00000016842)	Ccny (ENSJJAG00000017981)	Nckap5 (ENSJJAG00000015804) #10	ENSJJAG00000015262	Gpr39 (ENSJJAG00000004959) #14	Slc35f5 (ENSJJAG00000021727) #15	Actr3 (ENSJJAG00000007565) #16	Dpp10 (ENSJJAG00000022273) #17	ENSJJAG00000017042 #20	ENSJJAG00000018802	Ccdc93 (ENSJJAG00000014671) #21	Insig2 (ENSJJAG00000023505) #22	ENSJJAG00000015447 #23	Marco (ENSJJAG00000019790) #24	C1ql2 (ENSJJAG00000018412) #25	Steap3 (ENSJJAG00000016586) #26	ENSJJAG00000013605 #27	Dbi (ENSJJAG00000015822) #28	Tmem37 (ENSJJAG00000021074) #29	Sctr (ENSJJAG00000012095) #30	Cfap221 (ENSJJAG00000019558) #31	Tmem177 (ENSJJAG00000009602) #32	Ptpn4 (ENSJJAG00000000961) #33	ENSJJAG00000009765	ENSJJAG00000024011 #34	Ralb (ENSJJAG00000017455)	Inhbb (ENSJJAG00000013673)
Kangaroo rat	MODERN SPECIES	371									ENSDORG00000030228	ENSDORG00000025183	Dpp10 (ENSDORG00000014626) #17	ENSDORG00000024240	Ddx18 (ENSDORG00000011340) #20	ENSDORG00000009043	Ccdc93 (ENSDORG00000012503) #21	Insig2 (ENSDORG00000000448) #22	ENSDORG00000023179 #23	C1ql2 (ENSDORG00000024083) #25	Steap3 (ENSDORG00000002627) #26	ENSDORG00000026249 #28	Tmem37 (ENSDORG00000003687) #29	Sctr (ENSDORG00000003688) #30	ENSDORG00000025111	Tmem177 (ENSDORG00000002047) #32	ENSDORG00000029148 #33	Epb41l5 (ENSDORG00000010402) #34	Tmem185b (ENSDORG00000024131) #37	Ralb (ENSDORG00000012929)	Inhbb (ENSDORG00000000026)	Gli2 (ENSDORG00000008299)	Tfcp2l1 (ENSDORG00000004265)
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00580000081600.c.b #22
Common shrew	MODERN SPECIES	12072																INSIG2 (ENSSARG00000003321) #22
Hedgehog	MODERN SPECIES	14967																INSIG2 (ENSEEUG00000008765) #22
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Suina	ANCESTRAL SPECIES	48	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.w.b #28	ENSGT00390000006225.b #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Pig	MODERN SPECIES	6	NCKAP5 (ENSSSCG00000023479) #10	ENSSSCG00000051377	ENSSSCG00000052349	LYPD1 (ENSSSCG00000035102) #12	GPR39 (ENSSSCG00000015707) #14	ENSSSCG00000043652	ENSSSCG00000015708	SLC35F5 (ENSSSCG00000015709) #15	ACTR3 (ENSSSCG00000015710) #16	DPP10 (ENSSSCG00000015711) #17	ENSSSCG00000040343	ENSSSCG00000051241	DDX18 (ENSSSCG00000015712) #20	ENSSSCG00000015713	CCDC93 (ENSSSCG00000015714) #21	INSIG2 (ENSSSCG00000036229) #22	EN1 (ENSSSCG00000015715) #23	MARCO (ENSSSCG00000015716) #24	C1QL2 (ENSSSCG00000015717) #25	ENSSSCG00000031239	STEAP3 (ENSSSCG00000029304) #26	C2orf76 (ENSSSCG00000015718) #27	DBI (ENSSSCG00000032213) #28	ENSSSCG00000055602	PROC (ENSSSCG00000023693)	MAP3K2 (ENSSSCG00000030354)	ERCC3 (ENSSSCG00000015721)	ENSSSCG00000043454	BIN1 (ENSSSCG00000015720)	ENSSSCG00000050390	GYPC (ENSSSCG00000040701)
Chacoan peccary	MODERN SPECIES	130	MAP3K19 (ENSCWAG00000020492)	CCNT2 (ENSCWAG00000020610)	ACMSD (ENSCWAG00000020650)	TMEM163 (ENSCWAG00000020690) #7	ENSCWAG00000020698	MGAT5 (ENSCWAG00000020711) #8	NCKAP5 (ENSCWAG00000020738) #10	LYPD1 (ENSCWAG00000020808) #12	GPR39 (ENSCWAG00000020819) #14	SLC35F5 (ENSCWAG00000020838) #15	ACTR3 (ENSCWAG00000020907) #16	DPP10 (ENSCWAG00000020970) #17	DDX18 (ENSCWAG00000021070) #20	ENSCWAG00000021086	CCDC93 (ENSCWAG00000021093) #21	INSIG2 (ENSCWAG00000021121) #22	EN1 (ENSCWAG00000021129) #23	C1QL2 (ENSCWAG00000021139) #25	STEAP3 (ENSCWAG00000021144) #26	C2orf76 (ENSCWAG00000021154) #27	ENSCWAG00000021157	ENSCWAG00000021169 #28	ENSCWAG00000021188 #29	SCTR (ENSCWAG00000021195) #30	CFAP221 (ENSCWAG00000021212) #31	TMEM177 (ENSCWAG00000021241) #32	PTPN4 (ENSCWAG00000021254) #33	EPB41L5 (ENSCWAG00000021284) #34	TMEM185B (ENSCWAG00000021304) #37	RALB (ENSCWAG00000021312)	INHBB (ENSCWAG00000021316)
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Camelidae	ANCESTRAL SPECIES	16	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00500000045852	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862	ENSGT00940000159213
Arabian camel	MODERN SPECIES	31	ACMSD (ENSCDRG00005016206)	TMEM163 (ENSCDRG00005016133) #7	MGAT5 (ENSCDRG00005016077) #8	ENSCDRG00005016005	NCKAP5 (ENSCDRG00005015750) #10	LYPD1 (ENSCDRG00005015681) #12	ENSCDRG00005015665 #14	ENSCDRG00005015625 #14	SLC35F5 (ENSCDRG00005015269) #15	ACTR3 (ENSCDRG00005015049) #16	DPP10 (ENSCDRG00005014552) #17	DDX18 (ENSCDRG00005014417) #20	ENSCDRG00005014389	ENSCDRG00005014348	CCDC93 (ENSCDRG00005014090) #21	INSIG2 (ENSCDRG00005013996) #22	MARCO (ENSCDRG00005013731) #24	C1QL2 (ENSCDRG00005013691) #25	STEAP3 (ENSCDRG00005013627) #26	ENSCDRG00005013521 #27	ENSCDRG00005013176 #28	TMEM37 (ENSCDRG00005013093) #29	SCTR (ENSCDRG00005012956) #30	CFAP221 (ENSCDRG00005012865) #31	ENSCDRG00005012821 #32	PTPN4 (ENSCDRG00005012679) #33	EPB41L5 (ENSCDRG00005012411) #34	TMEM185B (ENSCDRG00005012369) #37	RALB (ENSCDRG00005012300)	INHBB (ENSCDRG00005012251)	GLI2 (ENSCDRG00005011956)
Alpaca	MODERN SPECIES	5318																INSIG2 (ENSVPAG00000011155) #22
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Pecora	ANCESTRAL SPECIES	24	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00390000004945.j	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Yarkand deer	MODERN SPECIES	26	TMEM163 (ENSCHYG00000017497) #7	MGAT5 (ENSCHYG00000017596) #8	ENSCHYG00000018252	NCKAP5 (ENSCHYG00000018364) #10	ENSCHYG00000018824	LYPD1 (ENSCHYG00000018957) #12	GPR39 (ENSCHYG00000019017) #14	SLC35F5 (ENSCHYG00000019102) #15	ENSCHYG00000019486 #16	DPP10 (ENSCHYG00000019654) #17	ENSCHYG00000020331	DDX18 (ENSCHYG00000020526) #20	ENSCHYG00000020836	CCDC93 (ENSCHYG00000020874) #21	ENSCHYG00000021196	INSIG2 (ENSCHYG00000021229) #22	EN1 (ENSCHYG00000021284) #23	MARCO (ENSCHYG00000021328) #24	C1QL2 (ENSCHYG00000021464) #25	ENSCHYG00000021492	STEAP3 (ENSCHYG00000021528) #26	C2orf76 (ENSCHYG00000021650) #27	ENSCHYG00000021738 #28	ENSCHYG00000021886 #29	SCTR (ENSCHYG00000021920) #30	CFAP221 (ENSCHYG00000022009) #31	TMEM177 (ENSCHYG00000022080) #32	PTPN4 (ENSCHYG00000022126) #33	ENSCHYG00000022507	EPB41L5 (ENSCHYG00000022604) #34	ENSCHYG00000023024
Percora_a	ANCESTRAL SPECIES	5	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00390000004945.j	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00390000004945.j	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Bovinae	ANCESTRAL SPECIES	5	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00390000004945.j	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00940000166097	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37
American bison	MODERN SPECIES	3330											DPP10 (ENSBBBG00000015165) #17	ENSBBBG00000015073	DDX18 (ENSBBBG00000015039) #20	ENSBBBG00000015023	CCDC93 (ENSBBBG00000015014) #21	INSIG2 (ENSBBBG00000014975) #22	ENSBBBG00000014956	C1QL2 (ENSBBBG00000014951) #25	ENSBBBG00000014946	STEAP3 (ENSBBBG00000007794) #26	C2orf76 (ENSBBBG00000003605) #27	DBI (ENSBBBG00000003635) #28	TMEM37 (ENSBBBG00000008749) #29	SCTR (ENSBBBG00000014923) #30	CFAP221 (ENSBBBG00000000832) #31	TMEM177 (ENSBBBG00000000859) #32	PTPN4 (ENSBBBG00000000869) #33	EPB41L5 (ENSBBBG00000000921) #34	TMEM185B (ENSBBBG00000001193) #37	RALB (ENSBBBG00000001195)	INHBB (ENSBBBG00000001207)
Bos	ANCESTRAL SPECIES	6	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00390000004945.j	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00510000046985.h.a.jd.k.a	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00940000166097	ENSGT00390000008042.A.b #26	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.a.a.a.a.a.b.a.a.b	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33
Bos_b	ANCESTRAL SPECIES	3	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00510000046985.h.a.jd.k.a	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00940000166097	ENSGT00390000008042.A.b #26	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.a.a.a.a.a.b.a.a.b	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33
Hybrid Bos Indicus	MODERN SPECIES	11	ENSBIXG00005014012	ENSBIXG00005013944	NCKAP5 (ENSBIXG00005013828) #10	ENSBIXG00005013529	ENSBIXG00005001628	ENSBIXG00005001622 #14	ENSBIXG00005013476 #14	SLC35F5 (ENSBIXG00005013442) #15	ENSBIXG00005013364	ACTR3 (ENSBIXG00005013355) #16	DPP10 (ENSBIXG00005001530) #17	ENSBIXG00005013117	DDX18 (ENSBIXG00005013068) #20	ENSBIXG00005013035	CCDC93 (ENSBIXG00005013009) #21	INSIG2 (ENSBIXG00005012960) #22	ENSBIXG00005012923	EN1 (ENSBIXG00005012883) #23	ENSBIXG00005001431 #24	C1QL2 (ENSBIXG00005012834) #25	ENSBIXG00005012819	STEAP3 (ENSBIXG00005012793) #26	ENSBIXG00005012698	C2orf76 (ENSBIXG00005012681) #27	ENSBIXG00005012649	DBI (ENSBIXG00005012635) #28	TMEM37 (ENSBIXG00005012560) #29	SCTR (ENSBIXG00005001379) #30	CFAP221 (ENSBIXG00005012511) #31	TMEM177 (ENSBIXG00005000338) #32	PTPN4 (ENSBIXG00005012430) #33
Cow	MODERN SPECIES	11	RAB3GAP1 (ENSBTAG00000013449)	MAP3K19 (ENSBTAG00000014409)	CCNT2 (ENSBTAG00000014158)	ACMSD (ENSBTAG00000008039)	TMEM163 (ENSBTAG00000018753) #7	MGAT5 (ENSBTAG00000018744) #8	NCKAP5 (ENSBTAG00000005238) #10	LYPD1 (ENSBTAG00000005234) #12	GPR39 (ENSBTAG00000047036) #14	SLC35F5 (ENSBTAG00000021103) #15	ACTR3 (ENSBTAG00000003401) #16	DPP10 (ENSBTAG00000005235) #17	ENSBTAG00000015077 #20	ENSBTAG00000016785	CCDC93 (ENSBTAG00000010221) #21	INSIG2 (ENSBTAG00000002112) #22	ENSBTAG00000050695	EN1 (ENSBTAG00000021494) #23	MARCO (ENSBTAG00000018473) #24	C1QL2 (ENSBTAG00000003771) #25	STEAP3 (ENSBTAG00000007111) #26	C2H2orf76 (ENSBTAG00000010599) #27	DBI (ENSBTAG00000009517) #28	TMEM37 (ENSBTAG00000026825) #29	SCTR (ENSBTAG00000013619) #30	ENSBTAG00000054356	CFAP221 (ENSBTAG00000009057) #31	TMEM177 (ENSBTAG00000009058) #32	PTPN4 (ENSBTAG00000020855) #33	EPB41L5 (ENSBTAG00000018236) #34	TMEM185B (ENSBTAG00000026829) #37
Bos_a	ANCESTRAL SPECIES	4	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT01100000263480.a.a.b.b.b.a.a.a.b.a.a.b.b.a.a.b.b.a.b.a	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.a.b	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00390000004945.j	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00510000046985.h.a.jd.k.a	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.b.a.a.a.a.a.b.a.a.b	ENSGT00390000015352 #27	ENSGT00940000154846.b.x.d #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37
Wild yak	MODERN SPECIES	2409													DDX18 (ENSBMUG00000015112) #20	ENSBMUG00000015093	CCDC93 (ENSBMUG00000015052) #21	INSIG2 (ENSBMUG00000014984) #22
Domestic yak	MODERN SPECIES	11	ENSBGRG00000000489	ENSBGRG00000000483	ENSBGRG00000000477	NCKAP5 (ENSBGRG00000000305) #10	ENSBGRG00000000269 #14	LYPD1 (ENSBGRG00000000260) #12	ENSBGRG00000000241 #14	SLC35F5 (ENSBGRG00000000225) #15	ENSBGRG00000000199	ACTR3 (ENSBGRG00000003534) #16	ENSBGRG00000003490	DPP10 (ENSBGRG00000003420) #17	DDX18 (ENSBGRG00000003383) #20	ENSBGRG00000003364	CCDC93 (ENSBGRG00000003157) #21	INSIG2 (ENSBGRG00000003131) #22	ENSBGRG00000003126	EN1 (ENSBGRG00000003115) #23	MARCO (ENSBGRG00000003091) #24	C1QL2 (ENSBGRG00000003071) #25	STEAP3 (ENSBGRG00000003034) #26	ENSBGRG00000003020	C2orf76 (ENSBGRG00000002982) #27	ENSBGRG00000002927 #28	TMEM37 (ENSBGRG00000002915) #29	SCTR (ENSBGRG00000002863) #30	CFAP221 (ENSBGRG00000002795) #31	TMEM177 (ENSBGRG00000002782) #32	PTPN4 (ENSBGRG00000002760) #33	EPB41L5 (ENSBGRG00000002704) #34	TMEM185B (ENSBGRG00000002677) #37
Caprinae	ANCESTRAL SPECIES	5	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	11	CCNT2 (ENSOARG00020017712)	ACMSD (ENSOARG00020017792)	ENSOARG00020017892	TMEM163 (ENSOARG00020017931) #7	MGAT5 (ENSOARG00020018034) #8	LYPD1 (ENSOARG00020019803) #12	ENSOARG00020019827 #14	ENSOARG00020019862 #14	SLC35F5 (ENSOARG00020019975) #15	ACTR3 (ENSOARG00020020404) #16	DPP10 (ENSOARG00020020607) #17	ENSOARG00020022402	DDX18 (ENSOARG00020022459) #20	ENSOARG00020022526	CCDC93 (ENSOARG00020022566) #21	Insig2 (ENSOARG00020022883) #22	EN1 (ENSOARG00020022915) #23	C1QL2 (ENSOARG00020022941) #25	STEAP3 (ENSOARG00020022977) #26	C2orf76 (ENSOARG00020023056) #27	DBI (ENSOARG00020023089) #28	TMEM37 (ENSOARG00020023172) #29	SCTR (ENSOARG00020023191) #30	CFAP221 (ENSOARG00020023250) #31	TMEM177 (ENSOARG00020023343) #32	PTPN4 (ENSOARG00020023367) #33	ENSOARG00020023578	EPB41L5 (ENSOARG00020023616) #34	TMEM185B (ENSOARG00020023687) #37	RALB (ENSOARG00020023701)	INHBB (ENSOARG00020023725)
Rambouillet Sheep	MODERN SPECIES	9	ENSOARG00020016830	UBR7 (ENSOARG00020016863)	BTBD7 (ENSOARG00020016945)	COX8C (ENSOARG00020017128)	UNC79 (ENSOARG00020017268)	ENSOARG00020019591	CCDC197 (ENSOARG00020019864)	OTUB2 (ENSOARG00020019940)	DDX24 (ENSOARG00020020047)	ENSOARG00020020236	ENSOARG00020020253	ENSOARG00020020306	ENSOARG00020020343	ENSOARG00020020363	ENSOARG00020020396	Insig2 (ENSOARG00020020422) #22	ENSOARG00020020448	ENSOARG00020020557	PPP4R4 (ENSOARG00020020603)	SERPINA10 (ENSOARG00020021021)	SERPINA6 (ENSOARG00020021061)	SERPINA1 (ENSOARG00020021121)	ENSOARG00020021240	SERPINA11 (ENSOARG00020021296)	SERPINA14 (ENSOARG00020021325)	SERPINA12 (ENSOARG00020010107)	SERPINA5 (ENSOARG00020010187)	ENSOARG00020010251	ENSOARG00020010306	ENSOARG00020010401	ENSOARG00020010498
Goat	MODERN SPECIES	11	ENSCHIG00000009827	ENSCHIG00000013148	TMEM163 (ENSCHIG00000025354) #7	MGAT5 (ENSCHIG00000027215) #8	NCKAP5 (ENSCHIG00000026101) #10	LYPD1 (ENSCHIG00000019109) #12	ENSCHIG00000015349 #11	GPR39 (ENSCHIG00000019970) #14	ENSCHIG00000026091	SLC35F5 (ENSCHIG00000013570) #15	ACTR3 (ENSCHIG00000015777) #16	DPP10 (ENSCHIG00000022323) #17	DDX18 (ENSCHIG00000019280) #20	ENSCHIG00000019661	CCDC93 (ENSCHIG00000013749) #21	INSIG2 (ENSCHIG00000017903) #22	ENSCHIG00000005523	ENSCHIG00000021503	EN1 (ENSCHIG00000017355) #23	ENSCHIG00000024655 #24	C1QL2 (ENSCHIG00000018522) #25	ENSCHIG00000010820	STEAP3 (ENSCHIG00000020375) #26	C2orf76 (ENSCHIG00000017290) #27	DBI (ENSCHIG00000015289) #28	TMEM37 (ENSCHIG00000008579) #29	SCTR (ENSCHIG00000023110) #30	CFAP221 (ENSCHIG00000017692) #31	TMEM177 (ENSCHIG00000013456) #32	ENSCHIG00000021745	PTPN4 (ENSCHIG00000012348) #33
Siberian musk deer	MODERN SPECIES	348													DDX18 (ENSMMSG00000022982) #20	ENSMMSG00000022997	CCDC93 (ENSMMSG00000006843) #21	INSIG2 (ENSMMSG00000006937) #22	EN1 (ENSMMSG00000006976) #23	MARCO (ENSMMSG00000006998) #24	C1QL2 (ENSMMSG00000007033) #25	STEAP3 (ENSMMSG00000007065) #26	C2orf76 (ENSMMSG00000007135) #27	ENSMMSG00000007158 #28	TMEM37 (ENSMMSG00000007278) #29	SCTR (ENSMMSG00000007312) #30	CFAP221 (ENSMMSG00000007401) #31	TMEM177 (ENSMMSG00000007502) #32	PTPN4 (ENSMMSG00000007520) #33	EPB41L5 (ENSMMSG00000007581) #34	TMEM185B (ENSMMSG00000007717) #37	RALB (ENSMMSG00000007732)	INHBB (ENSMMSG00000007756)
Cetacea	ANCESTRAL SPECIES	14	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000007776.d	ENSGT00390000005949 #15	ENSGT00940000155065.mb #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT01010000229817	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00940000159158	ENSGT00940000154817.b.b.b	ENSGT00390000011515	ENSGT00940000153568.B	ENSGT00940000168340	ENSGT00390000008496.j.a.b	ENSGT00940000160532	ENSGT00510000049102	ENSGT01040000240615
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00940000164579.f	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000007776.d	ENSGT00390000005949 #15	ENSGT00940000155065.mb #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT01010000229817	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00940000159158	ENSGT00940000154817.b.b.b	ENSGT00390000011515	ENSGT00940000153568.B	ENSGT00940000168340	ENSGT00390000008496.j.a.b	ENSGT00940000160532	ENSGT00510000049102	ENSGT01040000240615
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00940000164579.f	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000007776.d	ENSGT00390000005949 #15	ENSGT00940000155065.mb #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000229817	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00940000159158	ENSGT00940000154817.b.b.b	ENSGT00390000011515	ENSGT00940000153568.B	ENSGT00940000168340	ENSGT00390000008496.j.a.b	ENSGT00940000160532	ENSGT00510000049102	ENSGT01040000240615
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00390000001170 #7	ENSGT00910000147620	ENSGT00940000153470.a.a.a.a #8	ENSGT00390000011085.sb.a.a.a	ENSGT00940000164579.f	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000007776.d	ENSGT00390000005949 #15	ENSGT00940000155065.mb #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000229817	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00940000159158	ENSGT00940000154817.b.b.b	ENSGT00390000011515	ENSGT00940000153568.B	ENSGT00940000168340	ENSGT00390000008496.j.a.b	ENSGT00390000012916.y.b.a	ENSGT00940000160532	ENSGT00510000049102
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00390000011085.sb.a.a.a	ENSGT00940000164579.f	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000007776.d	ENSGT00390000005949 #15	ENSGT00940000155065.mb #16	ENSGT00940000154657.D #17	ENSGT00950000183010.a.a.a.b.a.a.a.a.b	ENSGT00680000100037 #20	ENSGT01010000229817	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.x #28	ENSGT00940000159158	ENSGT00940000154817.b.b.b	ENSGT00390000011515	ENSGT00940000153568.B	ENSGT00940000157629.e.b	ENSGT00390000008496.j.a.b	ENSGT00390000012916.y.b.a	ENSGT00940000160532	ENSGT00510000049102
Narwhal	MODERN SPECIES	302	MGAT5 (ENSMMNG00015006577) #8	ENSMMNG00015006617	ENSMMNG00015006627	ENSMMNG00015006640	NCKAP5 (ENSMMNG00015006713) #10	ENSMMNG00015006851	LYPD1 (ENSMMNG00015006865) #12	GPR39 (ENSMMNG00015006884) #14	SLC35F5 (ENSMMNG00015006913) #15	ACTR3 (ENSMMNG00015006959) #16	DPP10 (ENSMMNG00015007053) #17	ENSMMNG00015007279	DDX18 (ENSMMNG00015007294) #20	ENSMMNG00015007310	CCDC93 (ENSMMNG00015007324) #21	INSIG2 (ENSMMNG00015007370) #22	EN1 (ENSMMNG00015007385) #23	MARCO (ENSMMNG00015007408) #24	C1QL2 (ENSMMNG00015007435) #25	STEAP3 (ENSMMNG00015007462) #26	C2orf76 (ENSMMNG00015007492) #27	DBI (ENSMMNG00015007543) #28	TFCP2L1 (ENSMMNG00015007621)	CLASP1 (ENSMMNG00015007757)	NIFK (ENSMMNG00015007818)	TSN (ENSMMNG00015007849)	TIPRL (ENSMMNG00015007877)	ENSMMNG00015007894	ENSMMNG00015007905	ENSMMNG00015007917	CNTNAP5 (ENSMMNG00015007938)
Beluga whale	MODERN SPECIES	5	ENSDLEG00000016879	ENSDLEG00000016860	ENSDLEG00000016849	ENSDLEG00000016835	NCKAP5 (ENSDLEG00000016766) #10	ENSDLEG00000016753 #12	ENSDLEG00000016742 #14	GPR39 (ENSDLEG00000016739) #14	ENSDLEG00000016727	SLC35F5 (ENSDLEG00000016710) #15	ACTR3 (ENSDLEG00000016689) #16	DPP10 (ENSDLEG00000016504) #17	ENSDLEG00000016473	DDX18 (ENSDLEG00000016447) #20	CCDC93 (ENSDLEG00000016397) #21	INSIG2 (ENSDLEG00000016370) #22	EN1 (ENSDLEG00000016364) #23	MARCO (ENSDLEG00000016344) #24	C1QL2 (ENSDLEG00000016331) #25	STEAP3 (ENSDLEG00000016318) #26	C2orf76 (ENSDLEG00000016309) #27	DBI (ENSDLEG00000016300) #28	ENSDLEG00000016288	TFCP2L1 (ENSDLEG00000016257)	CLASP1 (ENSDLEG00000015964)	NIFK (ENSDLEG00000015915)	TSN (ENSDLEG00000015902)	ENSDLEG00000015893	ENSDLEG00000015883	ENSDLEG00000015876	ENSDLEG00000015867
Vaquita	MODERN SPECIES	18	ACMSD (ENSPSNG00000017684)	TMEM163 (ENSPSNG00000017853) #7	ENSPSNG00000017945	MGAT5 (ENSPSNG00000017999) #8	ENSPSNG00000018042	ENSPSNG00000018068	NCKAP5 (ENSPSNG00000018140) #10	ENSPSNG00000018466	LYPD1 (ENSPSNG00000018523) #12	GPR39 (ENSPSNG00000018589) #14	SLC35F5 (ENSPSNG00000018619) #15	ACTR3 (ENSPSNG00000018767) #16	DPP10 (ENSPSNG00000018963) #17	DDX18 (ENSPSNG00000019409) #20	CCDC93 (ENSPSNG00000019464) #21	INSIG2 (ENSPSNG00000019505) #22	EN1 (ENSPSNG00000019538) #23	MARCO (ENSPSNG00000019604) #24	C1QL2 (ENSPSNG00000019823) #25	STEAP3 (ENSPSNG00000019857) #26	C2orf76 (ENSPSNG00000019896) #27	DBI (ENSPSNG00000019962) #28	ENSPSNG00000020099	TFCP2L1 (ENSPSNG00000020132)	CLASP1 (ENSPSNG00000020303)	NIFK (ENSPSNG00000020550)	TSN (ENSPSNG00000020598)	ENSPSNG00000020656	ENSPSNG00000020708	ENSPSNG00000020731	ENSPSNG00000020753
Dolphin	MODERN SPECIES	4494																INSIG2 (ENSTTRG00000010645) #22
Sperm whale	MODERN SPECIES	11	ENSPCTG00005001360	CNTNAP5 (ENSPCTG00005001326)	ENSPCTG00005001304	ENSPCTG00005001297	ENSPCTG00005001286	ENSPCTG00005001269	TSN (ENSPCTG00005001244)	NIFK (ENSPCTG00005001216)	CLASP1 (ENSPCTG00005001140)	TFCP2L1 (ENSPCTG00005001081)	ENSPCTG00005001064	DBI (ENSPCTG00005001026) #28	C2H2orf76 (ENSPCTG00005001002) #27	C1QL2 (ENSPCTG00005000985) #25	ENSPCTG00005000944 #24	INSIG2 (ENSPCTG00005000920) #22	ENSPCTG00005000904	DDX18 (ENSPCTG00005000893) #20	ENSPCTG00005000885	DPP10 (ENSPCTG00005000715) #17	ACTR3 (ENSPCTG00005000631) #16	SLC35F5 (ENSPCTG00005000532) #15	ENSPCTG00005000510	ENSPCTG00005000496	GPR39 (ENSPCTG00005000485) #14	LYPD1 (ENSPCTG00005000474) #12	ENSPCTG00005000450	NCKAP5 (ENSPCTG00005000368) #10	ENSPCTG00005000210	PLPP2 (ENSPCTG00005021677)	MIER2 (ENSPCTG00005021624)
Blue whale	MODERN SPECIES	18	ACMSD (ENSBMSG00010000783)	TMEM163 (ENSBMSG00010000754) #7	MGAT5 (ENSBMSG00010000719) #8	ENSBMSG00010000681	NCKAP5 (ENSBMSG00010000614) #10	LYPD1 (ENSBMSG00010000564) #12	GPR39 (ENSBMSG00010000548) #14	ENSBMSG00010000523	SLC35F5 (ENSBMSG00010000488) #15	ACTR3 (ENSBMSG00010000443) #16	DPP10 (ENSBMSG00010000227) #17	ENSBMSG00010000138	ENSBMSG00010000112 #20	ENSBMSG00010008969	CCDC93 (ENSBMSG00010008946) #21	INSIG2 (ENSBMSG00010008925) #22	EN1 (ENSBMSG00010008910) #23	MARCO (ENSBMSG00010008865) #24	C1QL2 (ENSBMSG00010008829) #25	STEAP3 (ENSBMSG00010008818) #26	C2orf76 (ENSBMSG00010008794) #27	ENSBMSG00010008755 #28	TFCP2L1 (ENSBMSG00010008719)	CLASP1 (ENSBMSG00010008661)	ENSBMSG00010008626	TSN (ENSBMSG00010008606)	ENSBMSG00010008591	ENSBMSG00010008579	CNTNAP5 (ENSBMSG00010008532)	GYPC (ENSBMSG00010008508)	ENSBMSG00010008477
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00940000164988	ENSGT00500000045852	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Carnivora	ANCESTRAL SPECIES	17	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Caniformia	ANCESTRAL SPECIES	14	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.s.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.s.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00910000147009
Mustelinae	ANCESTRAL SPECIES	151													ENSGT00680000100037.u #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.t #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Ferret	MODERN SPECIES	234													ENSMPUG00000000856 #20	ENSMPUG00000000889	CCDC93 (ENSMPUG00000000891) #21	INSIG2 (ENSMPUG00000000893) #22	ENSMPUG00000000894	EN1 (ENSMPUG00000000896) #23	MARCO (ENSMPUG00000000897) #24	C1QL2 (ENSMPUG00000000918) #25	ENSMPUG00000000939	STEAP3 (ENSMPUG00000000941) #26	C2orf76 (ENSMPUG00000000943) #27	DBI (ENSMPUG00000000945) #28	TMEM37 (ENSMPUG00000000955) #29	SCTR (ENSMPUG00000000956) #30	CFAP221 (ENSMPUG00000000958) #31	TMEM177 (ENSMPUG00000018507) #32	ENSMPUG00000000963	PTPN4 (ENSMPUG00000000967) #33	ENSMPUG00000000973
American mink	MODERN SPECIES	150													DDX18 (ENSNVIG00000002370) #20	ENSNVIG00000002401	CCD93 (ENSNVIG00000002419) #21	INSI2 (ENSNVIG00000002546) #22	EN1 (ENSNVIG00000002588) #23	MARCO (ENSNVIG00000002607) #24	C1QL2 (ENSNVIG00000002646) #25	STEAP3 (ENSNVIG00000002650) #26	C2orf76 (ENSNVIG00000002692) #27	ENSNVIG00000002724 #28	TMEM37 (ENSNVIG00000002814) #29	SCTR (ENSNVIG00000002825) #30	CFAP221 (ENSNVIG00000002858) #31	ENSNVIG00000002918 #32	PTN4 (ENSNVIG00000002930) #33	EPB41L5 (ENSNVIG00000003068) #34	TMEM185B (ENSNVIG00000003291) #37	RALB (ENSNVIG00000003304)	INHBB (ENSNVIG00000003346)
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.s.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00910000147009
Ursus	ANCESTRAL SPECIES	135												ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.s.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00910000147009	ENSGT00940000159213
Polar bear	MODERN SPECIES	131												DPP10 (ENSUMAG00000013571) #17	ENSUMAG00000013543	DDX18 (ENSUMAG00000013505) #20	CCDC93 (ENSUMAG00000013321) #21	INSIG2 (ENSUMAG00000013299) #22	MARCO (ENSUMAG00000013256) #24	STEAP3 (ENSUMAG00000013236) #26	C2orf76 (ENSUMAG00000013230) #27	ENSUMAG00000013220 #28	ENSUMAG00000013219 #29	SCTR (ENSUMAG00000013215) #30	CFAP221 (ENSUMAG00000013203) #31	TMEM177 (ENSUMAG00000013198) #32	PTPN4 (ENSUMAG00000013175) #33	ENSUMAG00000013111 #34	ENSUMAG00000013094 #34	ENSUMAG00000013089 #37	RALB (ENSUMAG00000013087)	ENSUMAG00000013082	ENSUMAG00000013070
American black bear	MODERN SPECIES	1961														ENSUAMG00000004405	CCDC93 (ENSUAMG00000004461) #21	INSIG2 (ENSUAMG00000005679) #22
Giant Panda	MODERN SPECIES	11	RAB3GAP1 (ENSAMEG00000016369)	MAP3K19 (ENSAMEG00000016364)	CCNT2 (ENSAMEG00000016341)	ACMSD (ENSAMEG00000016329)	TMEM163 (ENSAMEG00000016323) #7	MGAT5 (ENSAMEG00000016315) #8	NCKAP5 (ENSAMEG00000015179) #10	ENSAMEG00000003070 #12	ENSAMEG00000003064 #14	ENSAMEG00000003041 #15	ACTR3 (ENSAMEG00000014979) #16	DPP10 (ENSAMEG00000016502) #17	DDX18 (ENSAMEG00000012626) #20	ENSAMEG00000029074	CCDC93 (ENSAMEG00000012600) #21	INSIG2 (ENSAMEG00000012592) #22	ENSAMEG00000026450 #23	MARCO (ENSAMEG00000008460) #24	C1QL2 (ENSAMEG00000026220) #25	STEAP3 (ENSAMEG00000008497) #26	ENSAMEG00000008507 #27	DBI (ENSAMEG00000008509) #28	TMEM37 (ENSAMEG00000018844) #29	SCTR (ENSAMEG00000008518) #30	CFAP221 (ENSAMEG00000008585) #31	PTPN4 (ENSAMEG00000008588) #33	ENSAMEG00000027265 #34	ENSAMEG00000008640 #34	TMEM185B (ENSAMEG00000018858) #37	RALB (ENSAMEG00000008682)	ENSAMEG00000029337
Canidae	ANCESTRAL SPECIES	56	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00390000002565.k.a	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.s.a.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Canis_lupus	ANCESTRAL SPECIES	46	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT00940000158012.c.a.a.a	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00390000002565.k.a	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00950000183030.m.a.b.b.d.b.a	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.s.a.a #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37
Dingo	MODERN SPECIES	101	TMEM163 (ENSCAFG00020015719) #7	ENSCAFG00020015709 #8	ENSCAFG00020015687 #10	LYPD1 (ENSCAFG00020015684) #12	ENSCAFG00020015681 #11	ENSCAFG00020015678	GPR39 (ENSCAFG00020015677) #14	ENSCAFG00020015676	SLC35F5 (ENSCAFG00020015641) #15	ENSCAFG00020015636	ACTR3 (ENSCAFG00020015635) #16	DPP10 (ENSCAFG00020014186) #17	DDX18 (ENSCAFG00020014114) #20	ENSCAFG00020014113	CCDC93 (ENSCAFG00020014106) #21	INSIG2 (ENSCAFG00020014102) #22	ENSCAFG00020014092	ENSCAFG00020014090	EN1 (ENSCAFG00020014084) #23	MARCO (ENSCAFG00020014069) #24	C1QL2 (ENSCAFG00020014066) #25	STEAP3 (ENSCAFG00020014063) #26	C2orf76 (ENSCAFG00020014061) #27	ENSCAFG00020014059 #28	TMEM37 (ENSCAFG00020014053) #29	SCTR (ENSCAFG00020014048) #30	ENSCAFG00020014045	ENSCAFG00020014038 #31	TMEM177 (ENSCAFG00020014037) #32	PTPN4 (ENSCAFG00020013960) #33	EPB41L5 (ENSCAFG00020013791) #34
Dog	MODERN SPECIES	10	ENSCAFG00845007813	NCKAP5 (ENSCAFG00845007269) #10	ENSCAFG00845006921 #12	ENSCAFG00845006875	ENSCAFG00845006855 #14	ENSCAFG00845006840	ENSCAFG00845006783 #15	ENSCAFG00845006717	ENSCAFG00845006622 #16	ENSCAFG00845006508	DPP10 (ENSCAFG00845006344) #17	ENSCAFG00845006094	DDX18 (ENSCAFG00845006065) #20	ENSCAFG00845006053	CCDC93 (ENSCAFG00845006007) #21	INSIG2 (ENSCAFG00845005970) #22	ENSCAFG00845005813	ENSCAFG00845005793	EN1 (ENSCAFG00845029136) #23	MARCO (ENSCAFG00845029094) #24	C1QL2 (ENSCAFG00845028993) #25	STEAP3 (ENSCAFG00845028945) #26	C2orf76 (ENSCAFG00845028896) #27	DBI (ENSCAFG00845028816) #28	SCTR (ENSCAFG00845028750) #30	CFAP221 (ENSCAFG00845028563) #31	PTPN4 (ENSCAFG00845028291) #33	EPB41L5 (ENSCAFG00845027396) #34	TMEM185B (ENSCAFG00845027210) #37	RALB (ENSCAFG00845027115)	INHBB (ENSCAFG00845027084)
Red fox	MODERN SPECIES	140															CCDC93 (ENSVVUG00000018260) #21	INSIG2 (ENSVVUG00000018265) #22	MARCO (ENSVVUG00000018318) #24	C1QL2 (ENSVVUG00000018325) #25	STEAP3 (ENSVVUG00000018327) #26	CUNH2orf76 (ENSVVUG00000018334) #27	DBI (ENSVVUG00000018337) #28	TMEM37 (ENSVVUG00000018340) #29	SCTR (ENSVVUG00000018344) #30	CFAP221 (ENSVVUG00000018351) #31	TMEM177 (ENSVVUG00000018368) #32	PTPN4 (ENSVVUG00000018380) #33	EPB41L5 (ENSVVUG00000018417) #34	TMEM185B (ENSVVUG00000018446) #37	RALB (ENSVVUG00000018448)	INHBB (ENSVVUG00000018451)	ENSVVUG00000018458
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT01100000263767.a.a	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352.p #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Panthera	ANCESTRAL SPECIES	9	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT01100000263767.a.a	ENSGT00390000004755.z	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352.o.a #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Tiger	MODERN SPECIES	350														DDX18 (ENSPTIG00000004868) #20	CCDC93 (ENSPTIG00000005841) #21	INSIG2 (ENSPTIG00000009860) #22	MARCO (ENSPTIG00000010523) #24	C1QL2 (ENSPTIG00000011241) #25	ENSPTIG00000012631 #26	C2orf76 (ENSPTIG00000014201) #27	DBI (ENSPTIG00000015369) #28	TMEM37 (ENSPTIG00000016973) #29	SCTR (ENSPTIG00000017489) #30	CFAP221 (ENSPTIG00000019206) #31	ENSPTIG00000020628 #32	PTPN4 (ENSPTIG00000020865) #33	EPB41L5 (ENSPTIG00000021414) #34	TMEM185B (ENSPTIG00000005912) #37	RALB (ENSPTIG00000006419)	INHBB (ENSPTIG00000006658)	ENSPTIG00000006857
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT01100000263767.a.a	ENSGT00390000004755.z	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352.p #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
leopard	MODERN SPECIES	55										DPP10 (ENSPPRG00000007698) #17	ENSPPRG00000006541	ENSPPRG00000006423	DDX18 (ENSPPRG00000006406) #20	ENSPPRG00000006313	CCDC93 (ENSPPRG00000006293) #21	INSIG2 (ENSPPRG00000005907) #22	EN1 (ENSPPRG00000005782) #23	MARCO (ENSPPRG00000005610) #24	C1QL2 (ENSPPRG00000005475) #25	STEAP3 (ENSPPRG00000005387) #26	ENSPPRG00000004196 #27	DBI (ENSPPRG00000003735) #28	TMEM37 (ENSPPRG00000003592) #29	SCTR (ENSPPRG00000003047) #30	ENSPPRG00000002848	ENSPPRG00000002809 #31	ENSPPRG00000002685 #32	PTPN4 (ENSPPRG00000002591) #33	EPB41L5 (ENSPPRG00000001586) #34	ENSPPRG00000000989	TMEM185B (ENSPPRG00000018302) #37
lion	MODERN SPECIES	8	CCNT2 (ENSPLOG00000007236)	ACMSD (ENSPLOG00000007318)	TMEM163 (ENSPLOG00000007370) #7	MGAT5 (ENSPLOG00000007485) #8	ENSPLOG00000007548	ENSPLOG00000007558	NCKAP5 (ENSPLOG00000007593) #10	LYPD1 (ENSPLOG00000007721) #12	GPR39 (ENSPLOG00000007748) #14	SLC35F5 (ENSPLOG00000007783) #15	ACTR3 (ENSPLOG00000007973) #16	DPP10 (ENSPLOG00000008097) #17	DDX18 (ENSPLOG00000008410) #20	ENSPLOG00000008448	CCDC93 (ENSPLOG00000008468) #21	INSIG2 (ENSPLOG00000008517) #22	EN1 (ENSPLOG00000008546) #23	MARCO (ENSPLOG00000008598) #24	C1QL2 (ENSPLOG00000008738) #25	STEAP3 (ENSPLOG00000008769) #26	ENSPLOG00000008802 #27	DBI (ENSPLOG00000008854) #28	TMEM37 (ENSPLOG00000008951) #29	SCTR (ENSPLOG00000008978) #30	CFAP221 (ENSPLOG00000009073) #31	ENSPLOG00000009207 #32	PTPN4 (ENSPLOG00000009251) #33	EPB41L5 (ENSPLOG00000009400) #34	TMEM185B (ENSPLOG00000009461) #37	RALB (ENSPLOG00000009480)	INHBB (ENSPLOG00000009508)
Cat	MODERN SPECIES	239	MGAT5 (ENSFCAG00000015759) #8	ENSFCAG00000048299	ENSFCAG00000042540	ENSFCAG00000045530	ENSFCAG00000047696	NCKAP5 (ENSFCAG00000004991) #10	LYPD1 (ENSFCAG00000000024) #12	GPR39 (ENSFCAG00000000023) #14	SLC35F5 (ENSFCAG00000023214) #15	ACTR3 (ENSFCAG00000013525) #16	DPP10 (ENSFCAG00000005743) #17	ENSFCAG00000052897	DDX18 (ENSFCAG00000000753) #20	ENSFCAG00000010869	CCDC93 (ENSFCAG00000010870) #21	INSIG2 (ENSFCAG00000008978) #22	EN1 (ENSFCAG00000043894) #23	MARCO (ENSFCAG00000014026) #24	ENSFCAG00000048987 #25	ENSFCAG00000049463	STEAP3 (ENSFCAG00000007092) #26	DBI (ENSFCAG00000034130) #28	CC1H2orf76 (ENSFCAG00000004427) #27	TMEM37 (ENSFCAG00000012415) #29	SCTR (ENSFCAG00000004432) #30	CFAP221 (ENSFCAG00000045807) #31	ENSFCAG00000043605 #32	PTPN4 (ENSFCAG00000018410) #33	EPB41L5 (ENSFCAG00000022135) #34	TMEM185B (ENSFCAG00000008734) #37	RALB (ENSFCAG00000029390)
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00940000164988	ENSGT00500000045852	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Equus	ANCESTRAL SPECIES	18	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00500000045852	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354.g.b #32	ENSGT00390000010354.h #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984
Horse	MODERN SPECIES	9	TMEM163 (ENSECAG00000017568) #7	MGAT5 (ENSECAG00000019492) #8	NCKAP5 (ENSECAG00000017122) #10	LYPD1 (ENSECAG00000026896) #12	GPR39 (ENSECAG00000005577) #14	SLC35F5 (ENSECAG00000009292) #15	ACTR3 (ENSECAG00000020867) #16	DPP10 (ENSECAG00000000161) #17	ENSECAG00000053929	DDX18 (ENSECAG00000015740) #20	ENSECAG00000014433	ENSECAG00000052340	ENSECAG00000039697	ENSECAG00000028096	CCDC93 (ENSECAG00000011453) #21	INSIG2 (ENSECAG00000006707) #22	EN1 (ENSECAG00000000157) #23	MARCO (ENSECAG00000012151) #24	C1QL2 (ENSECAG00000030720) #25	STEAP3 (ENSECAG00000006470) #26	C18H2orf76 (ENSECAG00000002063) #27	DBI (ENSECAG00000018949) #28	ENSECAG00000031200 #29	SCTR (ENSECAG00000018677) #30	ENSECAG00000036051 #31	ENSECAG00000046165 #32	TMEM177 (ENSECAG00000005417) #32	ENSECAG00000051098 #31	PTPN4 (ENSECAG00000016313) #33	ENSECAG00000053729	ENSECAG00000053964
Donkey	MODERN SPECIES	24	ACMSD (ENSEASG00005007438)	TMEM163 (ENSEASG00005007445) #7	MGAT5 (ENSEASG00005007448) #8	NCKAP5 (ENSEASG00005007468) #10	ENSEASG00005007486 #12	ENSEASG00005026537 #14	ENSEASG00005007490 #15	ENSEASG00005007495 #16	DPP10 (ENSEASG00005002144) #17	ENSEASG00005025997	ENSEASG00005002149	DDX18 (ENSEASG00005035983) #20	ENSEASG00005029911	ENSEASG00005034600	CCDC93 (ENSEASG00005031718) #21	INSIG2 (ENSEASG00005003537) #22	EN1 (ENSEASG00005023738) #23	MARCO (ENSEASG00005003544) #24	C1QL2 (ENSEASG00005003554) #25	STEAP3 (ENSEASG00005003559) #26	C2orf76 (ENSEASG00005003565) #27	ENSEASG00005026046 #28	ENSEASG00005038352	TMEM37 (ENSEASG00005003582) #29	SCTR (ENSEASG00005003586) #30	ENSEASG00005025541	ENSEASG00005031658	ENSEASG00005012849	ENSEASG00005029665 #32	ENSEASG00005025803 #32	ENSEASG00005027370 #31
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00940000164988	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352.m #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Megabat	MODERN SPECIES	356																INSIG2 (ENSPVAG00000009218) #22
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00940000164988	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352.m #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000163000 #37	ENSGT00940000155984	ENSGT00940000159862
Greater horseshoe bat	MODERN SPECIES	26	MAP3K19 (ENSRFEG00010007402)	CCNT2 (ENSRFEG00010007854)	ACMSD (ENSRFEG00010007914)	TMEM163 (ENSRFEG00010008075) #7	MGAT5 (ENSRFEG00010008097) #8	NCKAP5 (ENSRFEG00010008169) #10	ENSRFEG00010008520 #12	GPR39 (ENSRFEG00010008578) #14	SLC35F5 (ENSRFEG00010008610) #15	ACTR3 (ENSRFEG00010008856) #16	DPP10 (ENSRFEG00010008979) #17	ENSRFEG00010009464	DDX18 (ENSRFEG00010009499) #20	ENSRFEG00010009550	CCDC93 (ENSRFEG00010009589) #21	INSIG2 (ENSRFEG00010009692) #22	EN1 (ENSRFEG00010009720) #23	MARCO (ENSRFEG00010009759) #24	C1QL2 (ENSRFEG00010009811) #25	STEAP3 (ENSRFEG00010009849) #26	ENSRFEG00010009893 #27	DBI (ENSRFEG00010006803) #28	TMEM37 (ENSRFEG00010006908) #29	SCTR (ENSRFEG00010006931) #30	CFAP221 (ENSRFEG00010007006) #31	ENSRFEG00010007078	ENSRFEG00010007146	ENSRFEG00010007679 #32	PTPN4 (ENSRFEG00010007725) #33	EPB41L5 (ENSRFEG00010007790) #34	TMEM185B (ENSRFEG00010007871) #37
Microbat	MODERN SPECIES	1161														DDX18 (ENSMLUG00000017607) #20	CCDC93 (ENSMLUG00000004635) #21	INSIG2 (ENSMLUG00000028113) #22	EN1 (ENSMLUG00000008461) #23	MARCO (ENSMLUG00000014925) #24
Atlantogenata	ANCESTRAL SPECIES	138													ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00390000010354 #32	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000155984	ENSGT00940000159862	ENSGT00940000159213
Xenarthra	ANCESTRAL SPECIES	1151													ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22
Armadillo	MODERN SPECIES	1515					ENSDNOG00000044551	ENSDNOG00000036251	ENSDNOG00000043855	ENSDNOG00000032918 #17	ENSDNOG00000043585 #17	ENSDNOG00000035189	ENSDNOG00000040472	ENSDNOG00000019096 #20	ENSDNOG00000043227	CCDC93 (ENSDNOG00000019667) #21	ENSDNOG00000030693	INSIG2 (ENSDNOG00000018825) #22
Sloth	MODERN SPECIES	10375																INSIG2 (ENSCHOG00000003511) #22
Afrotheria	ANCESTRAL SPECIES	175														ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000155984	ENSGT00940000159862	ENSGT00940000159213
Afrotheria_a	ANCESTRAL SPECIES	177														ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000155984	ENSGT00940000159862	ENSGT00940000159213
Hyrax	MODERN SPECIES	12227																INSIG2 (ENSPCAG00000009698) #22
Elephant	MODERN SPECIES	408														DDX18 (ENSLAFG00000006915) #20	CCDC93 (ENSLAFG00000023112) #21	INSIG2 (ENSLAFG00000003033) #22	ENSLAFG00000027320	EN1 (ENSLAFG00000026702) #23	MARCO (ENSLAFG00000008685) #24	C1QL2 (ENSLAFG00000029475) #25	STEAP3 (ENSLAFG00000032778) #26	C2orf76 (ENSLAFG00000015678) #27	DBI (ENSLAFG00000005002) #28	TMEM37 (ENSLAFG00000006287) #29	SCTR (ENSLAFG00000006289) #30	CFAP221 (ENSLAFG00000005044) #31	PTPN4 (ENSLAFG00000015771) #33	EPB41L5 (ENSLAFG00000014087) #34	RALB (ENSLAFG00000027328)	INHBB (ENSLAFG00000009003)	GLI2 (ENSLAFG00000009839)
Tenrec	MODERN SPECIES	2371																INSIG2 (ENSETEG00000017414) #22
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000178790	ENSGT00390000006925 #31	ENSGT01100000263517.b.d.m.a.a.a.b	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000155984	ENSGT00940000159862
Opossum	DUPLICATION
Opossum	MODERN SPECIES	3	ENSMODG00000039758	NCKAP5 (ENSMODG00000024919) #10	LYPD1 (ENSMODG00000000657) #12	ENSMODG00000039684 #14	ENSMODG00000024920 #14	SLC35F5 (ENSMODG00000000615) #15	ACTR3 (ENSMODG00000000612) #16	ENSMODG00000044960	DPP10 (ENSMODG00000000555) #17	ENSMODG00000021045	ENSMODG00000041722	ENSMODG00000049065	DDX18 (ENSMODG00000000533) #20	ENSMODG00000000510	CCDC93 (ENSMODG00000000497) #21	ENSMODG00000000458 #22	ENSMODG00000051084	EN1 (ENSMODG00000000438) #23	MARCO (ENSMODG00000000433) #24	C1QL2 (ENSMODG00000000420) #25	STEAP3 (ENSMODG00000000408) #26	C2orf76 (ENSMODG00000043798) #27	DBI (ENSMODG00000000393) #28	ENSMODG00000000382 #29	SCTR (ENSMODG00000000380) #30	CFAP221 (ENSMODG00000000351) #31	ENSMODG00000000333	ENSMODG00000000345	ENSMODG00000039980	PTPN4 (ENSMODG00000000325) #33	EPB41L5 (ENSMODG00000028489) #34
Opossum	MODERN SPECIES		ENSMODG00000027492	NRXN3 (ENSMODG00000005150)	ENSMODG00000028190	ENSMODG00000049328	CEP128 (ENSMODG00000004554)	TSHR (ENSMODG00000003767)	GTF2A1 (ENSMODG00000003731)	STON2 (ENSMODG00000003722)	SEL1L (ENSMODG00000003714)	ENSMODG00000003668	FLRT2 (ENSMODG00000003513)	ENSMODG00000038776	ENSMODG00000003500	ENSMODG00000036650	ENSMODG00000025784	ENSMODG00000003474 #22	ENSMODG00000003467	ENSMODG00000028884	ENSMODG00000003465	GPR65 (ENSMODG00000024047)	KCNK10 (ENSMODG00000003344)	ENSMODG00000024048	ENSMODG00000003334	ZC3H14 (ENSMODG00000003282)	EML5 (ENSMODG00000003165)	TTC8 (ENSMODG00000003060)	FOXN3 (ENSMODG00000003001)	ENSMODG00000048670	ENSMODG00000041485	EFCAB11 (ENSMODG00000002963)	TDP1 (ENSMODG00000002958)
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000178790	ENSGT00390000006925 #31	ENSGT01100000263517.b.d.m.a.a.a.b	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000155984	ENSGT00940000159862
Diprotodontia	ANCESTRAL SPECIES	66												ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000163514.C	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.f #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000178790	ENSGT00390000006925 #31	ENSGT01100000263517.b.d.m.a.a.a.b	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000155984
Diprotodontia_a	ANCESTRAL SPECIES	63												ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000163514.C	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.f #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000178790	ENSGT00390000006925 #31	ENSGT01100000263517.b.d.m.a.a.a.b	ENSGT00940000157211 #33	ENSGT00940000156332 #34	ENSGT00940000155984
Common wonbat	MODERN SPECIES	669											ENSVURG00010011182	DPP10 (ENSVURG00010011189) #17	DDX18 (ENSVURG00010011214) #20	ENSVURG00010011230	CCDC93 (ENSVURG00010011239) #21	INSIG2 (ENSVURG00010011284) #22	ENSVURG00010011303	EN1 (ENSVURG00010011313) #23	ENSVURG00010011331	C1QL2 (ENSVURG00010011345) #25	STEAP3 (ENSVURG00010011355) #26	C2orf76 (ENSVURG00010011371) #27	ENSVURG00010011379 #28	TMEM37 (ENSVURG00010011386) #29	SCTR (ENSVURG00010011391) #30	CFAP221 (ENSVURG00010011419) #31	ENSVURG00010011482	PTPN4 (ENSVURG00010011502) #33	EPB41L5 (ENSVURG00010011543) #34	RALB (ENSVURG00010011553)	INHBB (ENSVURG00010011559)
koala	MODERN SPECIES	233											ENSPCIG00000005129	DPP10 (ENSPCIG00000022400) #17	DDX18 (ENSPCIG00000029015) #20	ENSPCIG00000029017	CCDC93 (ENSPCIG00000029020) #21	INSIG2 (ENSPCIG00000007612) #22	EN1 (ENSPCIG00000031233) #23	ENSPCIG00000025871 #24
Wallaby	MODERN SPECIES	13517																INSIG2 (ENSMEUG00000009574) #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000015928	CCNT2 (ENSSHAG00000015774)	ACMSD (ENSSHAG00000025004)	TMEM163 (ENSSHAG00000014154) #7	MGAT5 (ENSSHAG00000013191) #8	NCKAP5 (ENSSHAG00000009085) #10	ENSSHAG00000008832 #12	ENSSHAG00000024127 #14	ENSSHAG00000002800 #15	ENSSHAG00000013117 #16	DPP10 (ENSSHAG00000010186) #17	ENSSHAG00000000873	DDX18 (ENSSHAG00000018781) #20	ENSSHAG00000032045	CCDC93 (ENSSHAG00000018688) #21	INSIG2 (ENSSHAG00000018592) #22	EN1 (ENSSHAG00000029860) #23	ENSSHAG00000017322 #24	C1QL2 (ENSSHAG00000025877) #25	STEAP3 (ENSSHAG00000016635) #26	C2orf76 (ENSSHAG00000025069) #27	ENSSHAG00000025578 #28	TMEM37 (ENSSHAG00000024776) #29	SCTR (ENSSHAG00000016070) #30	CFAP221 (ENSSHAG00000015680) #31	ENSSHAG00000015612	PTPN4 (ENSSHAG00000027373) #33	EPB41L5 (ENSSHAG00000013685) #34	RALB (ENSSHAG00000012747)	INHBB (ENSSHAG00000025885)	GLI2 (ENSSHAG00000004233)
Sauria	ANCESTRAL SPECIES		ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000178790	ENSGT00940000165152	ENSGT00940000169408	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT01030000235139 #11	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00940000169408	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837
Episquamata	ANCESTRAL SPECIES		ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b.f #14	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b.e #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00940000169408	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837
Laterata	ANCESTRAL SPECIES	2	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT01100000263518.A.a.b.f #14	ENSGT01030000235139 #11	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b.e #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00940000164988.i	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00940000169408	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES		MGAT5 (ENSPMRG00000006713) #8	NCKAP5 (ENSPMRG00000006694) #10	LYPD1 (ENSPMRG00000006685) #12	GPR39 (ENSPMRG00000006679) #14	SLC35F5 (ENSPMRG00000006661) #15	ENSPMRG00000006655	ACTR3 (ENSPMRG00000006645) #16	ENSPMRG00000006640	ENSPMRG00000006638	DPP10 (ENSPMRG00000006619) #17	DDX18 (ENSPMRG00000006565) #20	ENSPMRG00000006546	ENSPMRG00000006543	CCDC93 (ENSPMRG00000006514) #21	ENSPMRG00000006497 #22	ENSPMRG00000006487 #22	ENSPMRG00000006476	EN1 (ENSPMRG00000006467) #23	ENSPMRG00000006453	C1QL2 (ENSPMRG00000006446) #25	STEAP3 (ENSPMRG00000006440) #26	C2orf76 (ENSPMRG00000006433) #27	ENSPMRG00000006429 #28	TMEM37 (ENSPMRG00000006423) #29	SCTR (ENSPMRG00000006411) #30	ENSPMRG00000006403	ENSPMRG00000006394	ESYT3 (ENSPMRG00000006366)	CEP70 (ENSPMRG00000006348)	FAIM (ENSPMRG00000006340)	ENSPMRG00000006336
Common wall lizard	MODERN SPECIES		TMEM163 (ENSPMRG00000006721) #7	MGAT5 (ENSPMRG00000006713) #8	NCKAP5 (ENSPMRG00000006694) #10	LYPD1 (ENSPMRG00000006685) #12	GPR39 (ENSPMRG00000006679) #14	SLC35F5 (ENSPMRG00000006661) #15	ENSPMRG00000006655	ACTR3 (ENSPMRG00000006645) #16	ENSPMRG00000006640	ENSPMRG00000006638	DPP10 (ENSPMRG00000006619) #17	DDX18 (ENSPMRG00000006565) #20	ENSPMRG00000006546	ENSPMRG00000006543	CCDC93 (ENSPMRG00000006514) #21	ENSPMRG00000006497 #22	ENSPMRG00000006487 #22	ENSPMRG00000006476	EN1 (ENSPMRG00000006467) #23	ENSPMRG00000006453	C1QL2 (ENSPMRG00000006446) #25	STEAP3 (ENSPMRG00000006440) #26	C2orf76 (ENSPMRG00000006433) #27	ENSPMRG00000006429 #28	TMEM37 (ENSPMRG00000006423) #29	SCTR (ENSPMRG00000006411) #30	ENSPMRG00000006403	ENSPMRG00000006394	ESYT3 (ENSPMRG00000006366)	CEP70 (ENSPMRG00000006348)	FAIM (ENSPMRG00000006340)
Argentine black and white tegu	MODERN SPECIES	27	ENSSMRG00000014413	TMEM163 (ENSSMRG00000014412) #7	MGAT5 (ENSSMRG00000014410) #8	NCKAP5 (ENSSMRG00000014407) #10	ENSSMRG00000014406 #14	ENSSMRG00000014405 #11	LYPD1 (ENSSMRG00000014404) #12	ENSSMRG00000014403 #14	SLC35F5 (ENSSMRG00000014402) #15	ACTR3 (ENSSMRG00000014400) #16	DPP10 (ENSSMRG00000014398) #17	ENSSMRG00000014396	DDX18 (ENSSMRG00000014395) #20	ENSSMRG00000014393	CCDC93 (ENSSMRG00000014392) #21	INSIG2 (ENSSMRG00000014389) #22	EN1 (ENSSMRG00000014387) #23	ENSSMRG00000014381 #24	C1QL2 (ENSSMRG00000014380) #25	STEAP3 (ENSSMRG00000014378) #26	C2orf76 (ENSSMRG00000014376) #27	ENSSMRG00000014375 #28	ENSSMRG00000014374	TMEM37 (ENSSMRG00000014373) #29	SCTR (ENSSMRG00000014372) #30	CFAP221 (ENSSMRG00000014366) #31	ESYT3 (ENSSMRG00000014363)	CEP70 (ENSSMRG00000014359)	FAIM (ENSSMRG00000014358)	ENSSMRG00000014356	ENSSMRG00000014355
Toxicofera	ANCESTRAL SPECIES	10	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b.f #14	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b.e #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00940000169408	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d
Elapidae	ANCESTRAL SPECIES		ENSGT00940000160383	ENSGT00940000155759.r.a	ENSGT00940000155759.r.b	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT01030000235139 #11	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b.e #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.b
Indian cobra	MODERN SPECIES		ENSNNAG00000015156	ENSNNAG00000015163	ENSNNAG00000015191	ENSNNAG00000015219	TMEM163 (ENSNNAG00000015249) #7	MGAT5 (ENSNNAG00000015375) #8	ENSNNAG00000015394	ENSNNAG00000015404 #10	LYPD1 (ENSNNAG00000015440) #12	GPR39 (ENSNNAG00000015448) #14	SLC35F5 (ENSNNAG00000015460) #15	ACTR3 (ENSNNAG00000015520) #16	DPP10 (ENSNNAG00000015568) #17	DDX18 (ENSNNAG00000015669) #20	CCDC93 (ENSNNAG00000015701) #21	INSIG2 (ENSNNAG00000015758) #22	EN1 (ENSNNAG00000015769) #23	MARCO (ENSNNAG00000015778) #24	C1QL2 (ENSNNAG00000015793) #25	STEAP3 (ENSNNAG00000015802) #26	C2orf76 (ENSNNAG00000015814) #27	ENSNNAG00000015832 #28	TMEM37 (ENSNNAG00000015842) #29	SCTR (ENSNNAG00000015847) #30	ENSNNAG00000015869	ENSNNAG00000015891	CEP70 (ENSNNAG00000015922)	FAIM (ENSNNAG00000015979)	PARP9 (ENSNNAG00000015994)	DTX3L (ENSNNAG00000016011)	ENSNNAG00000016025
Elapidae_a	ANCESTRAL SPECIES	5	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759.r.a	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT01030000235139 #11	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b.e #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.b	ENSGT00940000154311.a.b.l.a.b	ENSGT00390000008796
Acanthophiinae	ANCESTRAL SPECIES	7	ENSGT00940000160383	ENSGT00940000155759.r.a	ENSGT00940000155759.r.b	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT01030000235139 #11	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b.e #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.b	ENSGT00940000154311.a.b.l.a.b	ENSGT00390000008796
Mainland tiger snake	MODERN SPECIES	12	ENSNSUG00000009065	ENSNSUG00000009066	ENSNSUG00000009067	ACMSD (ENSNSUG00000009068)	TMEM163 (ENSNSUG00000009070) #7	MGAT5 (ENSNSUG00000009071) #8	NCKAP5 (ENSNSUG00000009074) #10	LYPD1 (ENSNSUG00000009129) #12	GPR39 (ENSNSUG00000009130) #14	SLC35F5 (ENSNSUG00000009131) #15	ACTR3 (ENSNSUG00000009133) #16	ENSNSUG00000009134	DPP10 (ENSNSUG00000009136) #17	DDX18 (ENSNSUG00000009142) #20	CCDC93 (ENSNSUG00000009330) #21	INSIG2 (ENSNSUG00000009857) #22	ENSNSUG00000009858	EN1 (ENSNSUG00000009859) #23	MARCO (ENSNSUG00000009860) #24	STEAP3 (ENSNSUG00000009861) #26	C2orf76 (ENSNSUG00000009862) #27	DBI (ENSNSUG00000009863) #28	TMEM37 (ENSNSUG00000009864) #29	SCTR (ENSNSUG00000009865) #30	ENSNSUG00000009866	ENSNSUG00000009867	CEP70 (ENSNSUG00000009868)	FAIM (ENSNSUG00000009869)	PARP9 (ENSNSUG00000009870)	DTX3L (ENSNSUG00000009874)	ENSNSUG00000009898
Eastern brown snake	MODERN SPECIES	71	ENSPTXG00000011809	CCNT2 (ENSPTXG00000011808)	ACMSD (ENSPTXG00000011807)	TMEM163 (ENSPTXG00000011806) #7	MGAT5 (ENSPTXG00000011804) #8	NCKAP5 (ENSPTXG00000011606) #10	ENSPTXG00000011602 #11	LYPD1 (ENSPTXG00000011601) #12	GPR39 (ENSPTXG00000011600) #14	SLC35F5 (ENSPTXG00000011599) #15	ACTR3 (ENSPTXG00000011598) #16	ENSPTXG00000011597	DPP10 (ENSPTXG00000011596) #17	DDX18 (ENSPTXG00000011595) #20	CCDC93 (ENSPTXG00000011594) #21	INSIG2 (ENSPTXG00000011593) #22	C1QL2 (ENSPTXG00000011592) #25	STEAP3 (ENSPTXG00000011591) #26	C2orf76 (ENSPTXG00000011590) #27	DBI (ENSPTXG00000011589) #28	TMEM37 (ENSPTXG00000011588) #29	SCTR (ENSPTXG00000011524) #30	ENSPTXG00000011523	CEP70 (ENSPTXG00000011522)	FAIM (ENSPTXG00000011521)	PARP9 (ENSPTXG00000011519)
Blue-lipped sea krait	MODERN SPECIES	1319																INSIG2 (ENSLLTG00000006052) #22
Lizard	MODERN SPECIES		ADCY5 (ENSACAG00000010774)	SEC22A (ENSACAG00000011029)	PDIA5 (ENSACAG00000011064)	ENSACAG00000045091	ENSACAG00000043603	SLC35F5 (ENSACAG00000002712) #15	ACTR3 (ENSACAG00000002564) #16	ENSACAG00000026449	ENSACAG00000039289	DPP10 (ENSACAG00000002171) #17	ENSACAG00000041076	ENSACAG00000039478	ENSACAG00000039374	DDX18 (ENSACAG00000002045) #20	CCDC93 (ENSACAG00000001798) #21	INSIG2 (ENSACAG00000037392) #22	EN1 (ENSACAG00000001792) #23	ENSACAG00000041716	SEMA5B (ENSACAG00000005053)	ENSACAG00000005017	ENSACAG00000037676	HSPBAP1 (ENSACAG00000004997)	SLC15A2 (ENSACAG00000004861)	ENSACAG00000004821	IQCB1 (ENSACAG00000004777)	ENSACAG00000041466	TSN (ENSACAG00000004757)	CLASP1 (ENSACAG00000004445)	TFCP2L1 (ENSACAG00000004268)	ENSACAG00000038509	GLI2 (ENSACAG00000004133)
tuatara	MODERN SPECIES	633													DDX18 (ENSSPUG00000016098) #20	ENSSPUG00000016109	CCDC93 (ENSSPUG00000016120) #21	INSIG2 (ENSSPUG00000016134) #22	ENSSPUG00000016157	STEAP3 (ENSSPUG00000016182) #26	C2orf76 (ENSSPUG00000016187) #27	ENSSPUG00000016197	TMEM37 (ENSSPUG00000016200) #29	SCTR (ENSSPUG00000016208) #30	ENSSPUG00000016220	ESYT3 (ENSSPUG00000016229)	CEP70 (ENSSPUG00000016260)	FAIM (ENSSPUG00000016270)	PARP9 (ENSSPUG00000016273)	DTX3L (ENSSPUG00000016278)	ENSSPUG00000016281	ENSSPUG00000016288	ENSSPUG00000016301
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000178790	ENSGT00940000165152	ENSGT00940000169408	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364
Archosauria	ANCESTRAL SPECIES	6	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000178790	ENSGT00940000165152	ENSGT00940000169408	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364
Aves	ANCESTRAL SPECIES	8	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000178790	ENSGT00940000165152	ENSGT00940000169408	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364
Neognathae	ANCESTRAL SPECIES	6	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000178790	ENSGT00940000165152	ENSGT00940000169408	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00500000045852	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00940000158559	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170.c #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00940000158559	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170.c #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a
Chicken	MODERN SPECIES	36	ZRANB3 (ENSGALG00010019717)	RAB3GAP1 (ENSGALG00010019643)	MAP3K19 (ENSGALG00010019600)	CCNT2 (ENSGALG00010019587)	ACMSD (ENSGALG00010019550)	TMEM163 (ENSGALG00010019474) #7	MGAT5 (ENSGALG00010019461) #8	NCKAP5 (ENSGALG00010019443) #10	LYPD1 (ENSGALG00010019423) #12	GPR39 (ENSGALG00010019416) #14	SLC35F5 (ENSGALG00010019398) #15	ACTR3 (ENSGALG00010019319) #16	DPP10 (ENSGALG00010021532) #17	DDX18 (ENSGALG00010021138) #20	CCDC93 (ENSGALG00010020963) #21	INSIG2 (ENSGALG00010020922) #22	EN1 (ENSGALG00010020915) #23	MARCO (ENSGALG00010020896) #24	C1QL2 (ENSGALG00010020798) #25	STEAP3 (ENSGALG00010020794) #26	C2orf76 (ENSGALG00010020766) #27	DBI (ENSGALG00010020747) #28	TMEM37 (ENSGALG00010020728) #29	SCTR (ENSGALG00010020713) #30	CFAP221 (ENSGALG00010020680) #31	ESYT3 (ENSGALG00010020664)	CEP70 (ENSGALG00010020646)	FAIM (ENSGALG00010020614)	PARP9 (ENSGALG00010020584)	DTX3L (ENSGALG00010020569)	ENSGALG00010022207
Turkey	MODERN SPECIES	27																ENSMGAG00000012332 #22	ENSMGAG00000012334 #21	ENSMGAG00000012345 #20	ENSMGAG00000020300 #17	ENSMGAG00000012354 #17	ENSMGAG00000012404 #16	ENSMGAG00000012413 #15	ENSMGAG00000015953 #14	ENSMGAG00000012403 #12	ENSMGAG00000021759 #14	ENSMGAG00000018410 #11	NCKAP5 (ENSMGAG00000012414) #10	ENSMGAG00000012429 #7	ENSMGAG00000012420 #8	ENSMGAG00000022328 #7	ACMSD (ENSMGAG00000012432)
Japanese quail	MODERN SPECIES	25	ABCB11 (ENSCJPG00005018691)	G6PC2 (ENSCJPG00005019257)	SPC25 (ENSCJPG00005019258)	CERS6 (ENSCJPG00005019259)	STK39 (ENSCJPG00005019260)	B3GALT1 (ENSCJPG00005019261)	ENSCJPG00005019262	ENSCJPG00005019385	ENSCJPG00005020507	ENSCJPG00005021005	TTC21B (ENSCJPG00005021006)	GALNT3 (ENSCJPG00005021007)	DPP10 (ENSCJPG00005021010) #17	DDX18 (ENSCJPG00005021012) #20	CCDC93 (ENSCJPG00005021013) #21	INSIG2 (ENSCJPG00005021015) #22	EN1 (ENSCJPG00005021021) #23	MARCO (ENSCJPG00005021022) #24	C1QL2 (ENSCJPG00005021024) #25	STEAP3 (ENSCJPG00005021025) #26	C2orf76 (ENSCJPG00005021026) #27	DBI (ENSCJPG00005021027) #28	TMEM37 (ENSCJPG00005021028) #29	SCTR (ENSCJPG00005021029) #30	CFAP221 (ENSCJPG00005021030) #31	ESYT3 (ENSCJPG00005021031)	CEP70 (ENSCJPG00005021032)	FAIM (ENSCJPG00005021033)	PARP9 (ENSCJPG00005021034)	DTX3L (ENSCJPG00005021035)	PARP14 (ENSCJPG00005021036)
Anatidae	ANCESTRAL SPECIES	37	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT00500000045852	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00940000154865	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a
Pink-footed goose	MODERN SPECIES	25	CCNT2 (ENSABRG00000003228)	ACMSD (ENSABRG00000003121)	TMEM163 (ENSABRG00000003073) #7	MGAT5 (ENSABRG00000002157) #8	NCKAP5 (ENSABRG00000001938) #10	ENSABRG00000001884 #11	GPR39 (ENSABRG00000001844) #14	SLC35F5 (ENSABRG00000001783) #15	ACTR3 (ENSABRG00000001760) #16	ENSABRG00000001742	DPP10 (ENSABRG00000001434) #17	DDX18 (ENSABRG00000001342) #20	ENSABRG00000001327	ENSABRG00000001320	CCDC93 (ENSABRG00000001244) #21	INSIG2 (ENSABRG00000001215) #22	EN1 (ENSABRG00000001167) #23	ENSABRG00000001002	C1QL2 (ENSABRG00000000968) #25	STEAP3 (ENSABRG00000000959) #26	C2orf76 (ENSABRG00000000943) #27	DBI (ENSABRG00000000933) #28	TMEM37 (ENSABRG00000000921) #29	SCTR (ENSABRG00000000883) #30	CFAP221 (ENSABRG00000000733) #31	ESYT3 (ENSABRG00000000665)	CEP70 (ENSABRG00000000650)	FAIM (ENSABRG00000000607)	PARP9 (ENSABRG00000000580)	DTX3L (ENSABRG00000000394)	ENSABRG00000000352
Duck	MODERN SPECIES	25	RAB3GAP1 (ENSAPLG00000014149)	MAP3K19 (ENSAPLG00000029463)	CCNT2 (ENSAPLG00000013992)	ACMSD (ENSAPLG00000013859)	TMEM163 (ENSAPLG00000024555) #7	MGAT5 (ENSAPLG00000013548) #8	NCKAP5 (ENSAPLG00000013464) #10	GPR39 (ENSAPLG00000013436) #14	SLC35F5 (ENSAPLG00000013162) #15	ACTR3 (ENSAPLG00000012845) #16	ENSAPLG00000028704	DPP10 (ENSAPLG00000012081) #17	DDX18 (ENSAPLG00000011648) #20	ENSAPLG00000025537	CCDC93 (ENSAPLG00000010805) #21	INSIG2 (ENSAPLG00000016106) #22	EN1 (ENSAPLG00000021676) #23	ENSAPLG00000000588	C1QL2 (ENSAPLG00000029910) #25	STEAP3 (ENSAPLG00000000975) #26	C2orf76 (ENSAPLG00000001103) #27	DBI (ENSAPLG00000008597) #28	TMEM37 (ENSAPLG00000001110) #29	SCTR (ENSAPLG00000008608) #30	CFAP221 (ENSAPLG00000009264) #31	ESYT3 (ENSAPLG00000009458)	CEP70 (ENSAPLG00000009891)	FAIM (ENSAPLG00000010169)	PARP9 (ENSAPLG00000010291)	DTX3L (ENSAPLG00000031101)	ENSAPLG00000010410
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000178790	ENSGT00940000165152	ENSGT00940000169408	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00390000006705	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a
Kakapo	MODERN SPECIES	22	RAB3GAP1 (ENSSHBG00005019778)	MAP3K19 (ENSSHBG00005019784)	CCNT2 (ENSSHBG00005019788)	ACMSD (ENSSHBG00005019791)	TMEM163 (ENSSHBG00005019795) #7	MGAT5 (ENSSHBG00005019800) #8	NCKAP5 (ENSSHBG00005019804) #10	LYPD1 (ENSSHBG00005019808) #12	GPR39 (ENSSHBG00005019810) #14	SLC35F5 (ENSSHBG00005019817) #15	ACTR3 (ENSSHBG00005000466) #16	DPP10 (ENSSHBG00005001557) #17	DDX18 (ENSSHBG00005001606) #20	ENSSHBG00005001662	CCDC93 (ENSSHBG00005001704) #21	INSIG2 (ENSSHBG00005001743) #22	EN1 (ENSSHBG00005001769) #23	MARCO (ENSSHBG00005001797) #24	C1QL2 (ENSSHBG00005001832) #25	STEAP3 (ENSSHBG00005001879) #26	C2orf76 (ENSSHBG00005001921) #27	ENSSHBG00005001950	TMEM37 (ENSSHBG00005001977) #29	SCTR (ENSSHBG00005002007) #30	ESYT3 (ENSSHBG00005002065)	CEP70 (ENSSHBG00005002124)	FAIM (ENSSHBG00005002176)	PARP9 (ENSSHBG00005002204)	DTX3L (ENSSHBG00005002234)	ENSSHBG00005002256	ENSSHBG00005002281
Golden eagle	MODERN SPECIES	22	RAB3GAP1 (ENSACCG00020001450)	ENSACCG00020001223	CCNT2 (ENSACCG00020001189)	ACMSD (ENSACCG00020001156)	TMEM163 (ENSACCG00020001133) #7	MGAT5 (ENSACCG00020001112) #8	NCKAP5 (ENSACCG00020001085) #10	LYPD1 (ENSACCG00020001065) #12	GPR39 (ENSACCG00020001056) #14	SLC35F5 (ENSACCG00020001037) #15	ACTR3 (ENSACCG00020001018) #16	DPP10 (ENSACCG00020000986) #17	DDX18 (ENSACCG00020000935) #20	ENSACCG00020000871	CCDC93 (ENSACCG00020000832) #21	INSIG2 (ENSACCG00020000804) #22	EN1 (ENSACCG00020000790) #23	MARCO (ENSACCG00020000763) #24	C1QL2 (ENSACCG00020000728) #25	STEAP3 (ENSACCG00020000701) #26	C2orf76 (ENSACCG00020000671) #27	DBI (ENSACCG00020000642) #28	TMEM37 (ENSACCG00020000624) #29	SCTR (ENSACCG00020000605) #30	ENSACCG00020000580	ESYT3 (ENSACCG00020000539)	CEP70 (ENSACCG00020000412)	FAIM (ENSACCG00020000368)	PARP9 (ENSACCG00020000355)	DTX3L (ENSACCG00020000326)	ENSACCG00020000317
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000178790	ENSGT00940000165152	ENSGT00940000169408	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364
Great tit	MODERN SPECIES	27	CCNT2 (ENSPMJG00000019941)	ACMSD (ENSPMJG00000019940)	TMEM163 (ENSPMJG00000019939) #7	MGAT5 (ENSPMJG00000019938) #8	NCKAP5 (ENSPMJG00000019937) #10	LYPD1 (ENSPMJG00000019936) #12	ENSPMJG00000019935 #11	GPR39 (ENSPMJG00000019934) #14	SLC35F5 (ENSPMJG00000019933) #15	ENSPMJG00000019932	ACTR3 (ENSPMJG00000019931) #16	DPP10 (ENSPMJG00000019929) #17	DDX18 (ENSPMJG00000019927) #20	ENSPMJG00000019926	CCDC93 (ENSPMJG00000019925) #21	INSIG2 (ENSPMJG00000019924) #22	MARCO (ENSPMJG00000019921) #24	C1QL2 (ENSPMJG00000019920) #25	STEAP3 (ENSPMJG00000019919) #26	C2orf76 (ENSPMJG00000019918) #27	DBI (ENSPMJG00000019917) #28	TMEM37 (ENSPMJG00000019916) #29	SCTR (ENSPMJG00000019915) #30	ENSPMJG00000019914	ENSPMJG00000019913	ENSPMJG00000019912	ESYT3 (ENSPMJG00000019911)	CEP70 (ENSPMJG00000019910)	FAIM (ENSPMJG00000019909)	PARP9 (ENSPMJG00000019908)	DTX3L (ENSPMJG00000019907)
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a
Common canary	MODERN SPECIES	8	ENSSCAG00000010603	CCNT2 (ENSSCAG00000010609)	ACMSD (ENSSCAG00000010635)	TMEM163 (ENSSCAG00000010647) #7	MGAT5 (ENSSCAG00000010656) #8	NCKAP5 (ENSSCAG00000010674) #10	LYPD1 (ENSSCAG00000010679) #12	ENSSCAG00000010704 #11	GPR39 (ENSSCAG00000010738) #14	SLC35F5 (ENSSCAG00000010739) #15	ACTR3 (ENSSCAG00000010749) #16	DPP10 (ENSSCAG00000010815) #17	DDX18 (ENSSCAG00000010971) #20	ENSSCAG00000010980	CCDC93 (ENSSCAG00000010986) #21	INSIG2 (ENSSCAG00000010992) #22	MARCO (ENSSCAG00000010994) #24	STEAP3 (ENSSCAG00000010999) #26	C2orf76 (ENSSCAG00000011003) #27	DBI (ENSSCAG00000011005) #28	TMEM37 (ENSSCAG00000011008) #29	SCTR (ENSSCAG00000011011) #30	CFAP221 (ENSSCAG00000011018) #31	ESYT3 (ENSSCAG00000011029)	CEP70 (ENSSCAG00000011041)	FAIM (ENSSCAG00000011051)	PARP9 (ENSSCAG00000011056)	DTX3L (ENSSCAG00000011061)	ENSSCAG00000011064	ENSSCAG00000011071	LMLN (ENSSCAG00000011098)
Zebra finch	MODERN SPECIES	29	MAP3K19 (ENSTGUG00000029229)	CCNT2 (ENSTGUG00000011715)	ACMSD (ENSTGUG00000011711)	TMEM163 (ENSTGUG00000011703) #7	MGAT5 (ENSTGUG00000011688) #8	NCKAP5 (ENSTGUG00000011682) #10	LYPD1 (ENSTGUG00000029108) #12	ENSTGUG00000026176 #11	GPR39 (ENSTGUG00000011677) #14	SLC35F5 (ENSTGUG00000011670) #15	ACTR3 (ENSTGUG00000011659) #16	DPP10 (ENSTGUG00000011635) #17	DDX18 (ENSTGUG00000011611) #20	ENSTGUG00000025171	CCDC93 (ENSTGUG00000011578) #21	INSIG2 (ENSTGUG00000024967) #22	EN1 (ENSTGUG00000026138) #23	MARCO (ENSTGUG00000011573) #24	C1QL2 (ENSTGUG00000020805) #25	ENSTGUG00000022199	STEAP3 (ENSTGUG00000011567) #26	C2orf76 (ENSTGUG00000028332) #27	DBI (ENSTGUG00000026977) #28	TMEM37 (ENSTGUG00000029671) #29	SCTR (ENSTGUG00000011525) #30	CFAP221 (ENSTGUG00000011524) #31	ESYT3 (ENSTGUG00000011515)	ENSTGUG00000011506	ENSTGUG00000022865	ENSTGUG00000020167	ENSTGUG00000019535
Medium ground finch	MODERN SPECIES	1	ENSGFOG00000004427	CCNT2 (ENSGFOG00000004444)	ACMSD (ENSGFOG00000004449)	TMEM163 (ENSGFOG00000004462) #7	MGAT5 (ENSGFOG00000004477) #8	NCKAP5 (ENSGFOG00000004514) #10	LYPD1 (ENSGFOG00000004572) #12	GPR39 (ENSGFOG00000004584) #14	ENSGFOG00000004597 #11	SLC35F5 (ENSGFOG00000004612) #15	ACTR3 (ENSGFOG00000004640) #16	DPP10 (ENSGFOG00000004798) #17	DDX18 (ENSGFOG00000004826) #20	ENSGFOG00000004840	CCDC93 (ENSGFOG00000004846) #21	INSIG2 (ENSGFOG00000004873) #22	MARCO (ENSGFOG00000004881) #24	STEAP3 (ENSGFOG00000004909) #26	C2orf76 (ENSGFOG00000004979) #27	DBI (ENSGFOG00000004994) #28	TMEM37 (ENSGFOG00000005003) #29	SCTR (ENSGFOG00000005011) #30	ENSGFOG00000005038	ESYT3 (ENSGFOG00000005062)	CEP70 (ENSGFOG00000005278)	FAIM (ENSGFOG00000005307)	PARP9 (ENSGFOG00000005316)	DTX3L (ENSGFOG00000005321)	ENSGFOG00000005411	ENSGFOG00000006305	ENSGFOG00000006312
Flycatcher	MODERN SPECIES	26	MAP3K19 (ENSFALG00000013726)	CCNT2 (ENSFALG00000013725)	ACMSD (ENSFALG00000013724)	TMEM163 (ENSFALG00000013723) #7	MGAT5 (ENSFALG00000013722) #8	NCKAP5 (ENSFALG00000026028) #10	LYPD1 (ENSFALG00000013717) #12	ENSFALG00000024409 #11	GPR39 (ENSFALG00000024975) #14	SLC35F5 (ENSFALG00000013716) #15	ACTR3 (ENSFALG00000013704) #16	DPP10 (ENSFALG00000013689) #17	DDX18 (ENSFALG00000013672) #20	ENSFALG00000013667	CCDC93 (ENSFALG00000013655) #21	INSIG2 (ENSFALG00000013646) #22	ENSFALG00000028266	MARCO (ENSFALG00000013637) #24	C1QL2 (ENSFALG00000013633) #25	STEAP3 (ENSFALG00000026887) #26	C2orf76 (ENSFALG00000025829) #27	DBI (ENSFALG00000025662) #28	TMEM37 (ENSFALG00000013623) #29	SCTR (ENSFALG00000013594) #30	CFAP221 (ENSFALG00000013582) #31	ESYT3 (ENSFALG00000013567)	ENSFALG00000013561	FAIM (ENSFALG00000023897)	PARP9 (ENSFALG00000013553)	ENSFALG00000013550	ENSFALG00000013545
African ostrich	MODERN SPECIES	692	TMEM192 (ENSSCUG00000013551)	KLHL2 (ENSSCUG00000013554)	MSMO1 (ENSSCUG00000013562)	CPE (ENSSCUG00000013565)	TLL1 (ENSSCUG00000013569)	SPOCK3 (ENSSCUG00000013577)	ANXA10 (ENSSCUG00000013580)	DDX60 (ENSSCUG00000013584)	PALLD (ENSSCUG00000013612)	CBR4 (ENSSCUG00000013631)	ACTR3 (ENSSCUG00000013633) #16	DPP10 (ENSSCUG00000013651) #17	ENSSCUG00000013697	DDX18 (ENSSCUG00000013699) #20	CCDC93 (ENSSCUG00000013701) #21	INSIG2 (ENSSCUG00000013704) #22	ENSSCUG00000013707	STEAP3 (ENSSCUG00000013709) #26	C2orf76 (ENSSCUG00000013710) #27	DBI (ENSSCUG00000013711) #28	TMEM37 (ENSSCUG00000013714) #29	SCTR (ENSSCUG00000013715) #30	CFAP221 (ENSSCUG00000013720) #31	ESYT3 (ENSSCUG00000013727)	CEP70 (ENSSCUG00000013738)	FAIM (ENSSCUG00000013742)	PARP9 (ENSSCUG00000013744)	ENSSCUG00000013748	ENSSCUG00000013753	ENSSCUG00000013758	LMLN (ENSSCUG00000013763)
Australian saltwater crocodile	MODERN SPECIES	66	ENSCPRG00005003797	CCNT2 (ENSCPRG00005003794)	ENSCPRG00005003790	ACMSD (ENSCPRG00005003785)	TMEM163 (ENSCPRG00005003777) #7	MGAT5 (ENSCPRG00005003744) #8	ENSCPRG00005003730	NCKAP5 (ENSCPRG00005003668) #10	ENSCPRG00005003650 #11	GPR39 (ENSCPRG00005003646) #14	SLC35F5 (ENSCPRG00005003643) #15	ACTR3 (ENSCPRG00005003555) #16	DPP10 (ENSCPRG00005003460) #17	DDX18 (ENSCPRG00005003425) #20	CCDC93 (ENSCPRG00005003409) #21	INSIG2 (ENSCPRG00005003394) #22	STEAP3 (ENSCPRG00005003364) #26	C2orf76 (ENSCPRG00005003361) #27	DBI (ENSCPRG00005003359) #28	TMEM37 (ENSCPRG00005003357) #29	SCTR (ENSCPRG00005003354) #30	ENSCPRG00005003346	CEP70 (ENSCPRG00005003340)	FAIM (ENSCPRG00005003325)	PARP9 (ENSCPRG00005003100)	DTX3L (ENSCPRG00005003075)	ENSCPRG00005003042	LMLN (ENSCPRG00005002968)	ENSCPRG00005002959	OSBPL11 (ENSCPRG00005002944)	ENSCPRG00005002941
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837.a	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a	ENSGT00940000154311.a.b.l.b
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000165152	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837.a	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a
Emydidae	ANCESTRAL SPECIES	4	ENSGT00940000160383	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837.a	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a	ENSGT00940000154311.a.b.l.b
Three-toed box turtle	MODERN SPECIES	25	MAP3K19 (ENSTMTG00000014649)	CCNT2 (ENSTMTG00000014231)	ACMSD (ENSTMTG00000014161)	TMEM163 (ENSTMTG00000014144) #7	MGAT5 (ENSTMTG00000014128) #8	NCKAP5 (ENSTMTG00000014099) #10	LYPD1 (ENSTMTG00000014084) #12	ENSTMTG00000014075 #11	GPR39 (ENSTMTG00000014070) #14	SLC35F5 (ENSTMTG00000014043) #15	ACTR3 (ENSTMTG00000014008) #16	DPP10 (ENSTMTG00000013893) #17	DDX18 (ENSTMTG00000013762) #20	ENSTMTG00000013724	CCDC93 (ENSTMTG00000013694) #21	INSIG2 (ENSTMTG00000013675) #22	EN1 (ENSTMTG00000013659) #23	C1QL2 (ENSTMTG00000013645) #25	STEAP3 (ENSTMTG00000013630) #26	C2orf76 (ENSTMTG00000013613) #27	DBI (ENSTMTG00000013605) #28	TMEM37 (ENSTMTG00000013600) #29	SCTR (ENSTMTG00000013571) #30	ENSTMTG00000013537	ESYT3 (ENSTMTG00000013474)	CEP70 (ENSTMTG00000013448)	FAIM (ENSTMTG00000013413)	ENSTMTG00000013393	DTX3L (ENSTMTG00000013379)	PARP14 (ENSTMTG00000013256)	LMLN (ENSTMTG00000012941)
painted turtle	MODERN SPECIES	13	CELSR1 (ENSCPBG00000011625)	TRMU (ENSCPBG00000011621)	GTSE1 (ENSCPBG00000011618)	TPRKB (ENSCPBG00000011614)	ENSCPBG00000011611	CPNE8 (ENSCPBG00000011604)	ENSCPBG00000011601	KIF21A (ENSCPBG00000010980)	ABCD2 (ENSCPBG00000010664)	SLC2A13 (ENSCPBG00000010657)	LRRK2 (ENSCPBG00000010589)	ERGIC2 (ENSCPBG00000010534)	DDX18 (ENSCPBG00000010529) #20	ENSCPBG00000010527	CCDC93 (ENSCPBG00000010511) #21	INSIG2 (ENSCPBG00000010499) #22	EN1 (ENSCPBG00000010495) #23	C1QL2 (ENSCPBG00000010491) #25	DPP10 (ENSCPBG00000010272) #17	ENSCPBG00000010263	ZRANB3 (ENSCPBG00000010250)	RAB3GAP1 (ENSCPBG00000010240)	ENSCPBG00000010231	CCNT2 (ENSCPBG00000010223)	ACMSD (ENSCPBG00000010217)	TMEM163 (ENSCPBG00000010214) #7	MGAT5 (ENSCPBG00000010211) #8	NCKAP5 (ENSCPBG00000010195) #10	LYPD1 (ENSCPBG00000010186) #12	ENSCPBG00000010185 #11	GPR39 (ENSCPBG00000010183) #14
Testudinidae	ANCESTRAL SPECIES	8	ENSGT00940000155759	ENSGT00490000043417	ENSGT00390000001170 #7	ENSGT00950000185980	ENSGT00940000153470.a.a.a.a #8	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01030000235139 #11	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.D #17	ENSGT00680000100037 #20	ENSGT01010000222287.B.a.b.b	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00940000165152	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837.a	ENSGT00940000154578.A.d	ENSGT00940000154311.a.b.l.a	ENSGT00940000154311.a.b.l.b
Goode s thornscrub tortoise	MODERN SPECIES	2	ENSGEVG00005021097	ENSGEVG00005021102	ACMSD (ENSGEVG00005021106)	TMEM163 (ENSGEVG00005021110) #7	ENSGEVG00005021113	MGAT5 (ENSGEVG00005021116) #8	NCKAP5 (ENSGEVG00005021121) #10	LYPD1 (ENSGEVG00005021126) #12	GPR39 (ENSGEVG00005021128) #14	SLC35F5 (ENSGEVG00005021132) #15	ACTR3 (ENSGEVG00005021138) #16	DPP10 (ENSGEVG00005021153) #17	DDX18 (ENSGEVG00005021167) #20	ENSGEVG00005021170	CCDC93 (ENSGEVG00005021172) #21	INSIG2 (ENSGEVG00005021181) #22	EN1 (ENSGEVG00005021186) #23	C1QL2 (ENSGEVG00005021188) #25	STEAP3 (ENSGEVG00005021190) #26	C2orf76 (ENSGEVG00005021194) #27	DBI (ENSGEVG00005021198) #28	TMEM37 (ENSGEVG00005021202) #29	SCTR (ENSGEVG00005021205) #30	ENSGEVG00005021212	ENSGEVG00005004084	CEP70 (ENSGEVG00005004129)	FAIM (ENSGEVG00005004273)	ENSGEVG00005004297	DTX3L (ENSGEVG00005004325)	PARP14 (ENSGEVG00005004399)	LMLN (ENSGEVG00005004601)
Abingdon island giant tortoise	MODERN SPECIES	1788													DDX18 (ENSCABG00000007702) #20	ENSCABG00000007701	CCDC93 (ENSCABG00000007593) #21	INSIG2 (ENSCABG00000007584) #22	EN1 (ENSCABG00000007583) #23	C1QL2 (ENSCABG00000007581) #25	ENSCABG00000007579	STEAP3 (ENSCABG00000007577) #26	C2orf76 (ENSCABG00000007572) #27	DBI (ENSCABG00000007569) #28	TMEM37 (ENSCABG00000007567) #29	SCTR (ENSCABG00000007565) #30	ENSCABG00000007561	ENSCABG00000007557	CEP70 (ENSCABG00000007550)	FAIM (ENSCABG00000007548)	ENSCABG00000007439	DTX3L (ENSCABG00000007427)	ENSCABG00000007425
Chinese turtle	MODERN SPECIES	2215					ENSPSIG00000001571	NCKAP5 (ENSPSIG00000002891) #10	ENSPSIG00000001578	LYPD1 (ENSPSIG00000002919) #12	GPR39 (ENSPSIG00000002921) #14	SLC35F5 (ENSPSIG00000002923) #15	ACTR3 (ENSPSIG00000002957) #16	DPP10 (ENSPSIG00000002964) #17	ENSPSIG00000001588	ENSPSIG00000002966	DDX18 (ENSPSIG00000002977) #20	INSIG2 (ENSPSIG00000003037) #22	EN1 (ENSPSIG00000003044) #23	ENSPSIG00000003054	ENSPSIG00000001591 #25	STEAP3 (ENSPSIG00000003194) #26	C2orf76 (ENSPSIG00000003312) #27	DBI (ENSPSIG00000003317) #28	TMEM37 (ENSPSIG00000003326) #29	SCTR (ENSPSIG00000003330) #30	CFAP221 (ENSPSIG00000003411) #31	ESYT3 (ENSPSIG00000003444)	CEP70 (ENSPSIG00000003467)	FAIM (ENSPSIG00000003503)	ENSPSIG00000003506	DTX3L (ENSPSIG00000003513)	PARP14 (ENSPSIG00000003516)
Anura	ANCESTRAL SPECIES	436														ENSGT00940000154657.D #17	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22
Frog	MODERN SPECIES	9											ENSXETG00000048453 #14	SLC35F5 (ENSXETG00000046883) #15	actr3 (ENSXETG00000015291) #16	dpp10 (ENSXETG00000000625) #20	ccdc93 (ENSXETG00000014940) #21	insig2 (ENSXETG00000041409) #22	ENSXETG00000043053	en1 (ENSXETG00000046176) #23	ENSXETG00000048132	ENSXETG00000047501 #25	ENSXETG00000044865 #24	steap3 (ENSXETG00000033379) #26	c2orf76 (ENSXETG00000049047) #27	dbi (ENSXETG00000045826) ##28	tmem37 (ENSXETG00000042949) #29	SCTR (ENSXETG00000040455) #30	cfap221 (ENSXETG00000046793) #31	esyt3 (ENSXETG00000042276)	cep70 (ENSXETG00000047914)	hacd2 (ENSXETG00000040752)	faim (ENSXETG00000007986)
Leishan spiny toad	MODERN SPECIES	10										DPP10 (ENSLLEG00000018613) #17	ENSLLEG00000019242	ENSLLEG00000019285	CCDC93 (ENSLLEG00000019326) #21	DDX18 (ENSLLEG00000020005) #20	ENSLLEG00000020165	INSIG2 (ENSLLEG00000020184) #22	ENSLLEG00000020268	ENSLLEG00000020299	TFCP2L1 (ENSLLEG00000020456)	ENSLLEG00000021848	CLASP1 (ENSLLEG00000021991)	ENSLLEG00000024496	NIFK (ENSLLEG00000024529)	ENSLLEG00000024577	ENSLLEG00000024634	ENSLLEG00000024660	ENSLLEG00000024762	HSPBAP1 (ENSLLEG00000024990)	ENSLLEG00000025113	SEMA5B (ENSLLEG00000025197)	ENSLLEG00000025764
Coelacanth	MODERN SPECIES	307												DPP10 (ENSLACG00000011868) #17	DDX18 (ENSLACG00000015308) #20	ENSLACG00000015444	CCDC93 (ENSLACG00000015663) #21	INSIG2 (ENSLACG00000016119) #22	EN1 (ENSLACG00000017310) #23	ENSLACG00000017400	C1QL2 (ENSLACG00000017586) #25	C2orf76 (ENSLACG00000017656) #27	STEAP3 (ENSLACG00000017667) #26	DBI (ENSLACG00000017739) #28	TMEM37 (ENSLACG00000017762) #29	ENSLACG00000022607	ENSLACG00000017998
Actinopterygii	ANCESTRAL SPECIES	123	ENSGT00940000160130	ENSGT00940000157406	ENSGT00930000151029	ENSGT00940000164835	ENSGT00940000158398	ENSGT00390000003114.e.b.a	ENSGT00390000008796	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.B ##17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000161072	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154311.a.b	ENSGT00940000154311.a.a.a.b	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30
Neopterygii	ANCESTRAL SPECIES	1	ENSGT00940000157406	ENSGT00930000151029.i.a	ENSGT00940000164835	ENSGT00940000158398	ENSGT00390000003114.e.b.a	ENSGT00390000008796	ENSGT00530000063607.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.A ##17	ENSGT00940000154657.B ##17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00390000009029	ENSGT00390000007364	ENSGT00940000158837	ENSGT00940000154311.a.b	ENSGT00940000154311.a.a.a.b	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000160618 #30	ENSGT00390000006925 #31
Osteoglossocephalai	ANCESTRAL SPECIES	223					ENSGT00930000151029.i.b	ENSGT00390000003114.e.b.a	ENSGT00530000063607.b.j.b #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.A ##17	ENSGT00940000154657.B ##17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811 #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b #25	ENSGT00390000008042.A.b.d #26	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000160618 #30	ENSGT00390000006925 #31
Osteoglossiformes	ANCESTRAL SPECIES	414							ENSGT00530000063607.b.j.a #10	ENSGT00390000002215 #12	ENSGT01100000263518.A.a.b.nb #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.A ##17	ENSGT00940000154657.B ##17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES		gpd1c (ENSSFOG00015022733)	ENSSFOG00015022704 #10	LYPD1 (ENSSFOG00015022686) #12	ENSSFOG00015022676	gpr39 (ENSSFOG00015027257) #14	SLC35F5 (ENSSFOG00015027844) #15	LYPD1 (ENSSFOG00015026632) #12	ENSSFOG00015029033	gpr39 (ENSSFOG00015022669) #14	SLC35F5 (ENSSFOG00015022658) #15	actr3 (ENSSFOG00015022647) #16	ENSSFOG00015022612 ##17	ENSSFOG00015022573 ##17	ddx18 (ENSSFOG00015029658) #20	ccdc93 (ENSSFOG00015024988) #21	INSIG2 (ENSSFOG00015028296) #22	ENSSFOG00015028367	ENSSFOG00015006650	ENSSFOG00015029379	ENSSFOG00015006638	ENSSFOG00015030581	LRRC24 (ENSSFOG00015006665)	THEM6 (ENSSFOG00015006698)	THEM6 (ENSSFOG00015031535)	EEF1D (ENSSFOG00015006740)	ARHGAP39 (ENSSFOG00015006826)	LHX6 (ENSSFOG00015006864)	ndufa8 (ENSSFOG00015006890)	krt1-c5 (ENSSFOG00015006903)	zbtb26 (ENSSFOG00015006928)	GPR21 (ENSSFOG00015006937)
Asian bonytongue	MODERN SPECIES	48											ENSSFOG00015030665 ##17	ENSSFOG00015031460	ENSSFOG00015029642 ##17	ddx18 (ENSSFOG00015022557) #20	ccdc93 (ENSSFOG00015022533) #21	INSIG2 (ENSSFOG00015026592) #22
P. kingsleyae	MODERN SPECIES	406	ENSPKIG00000001894	ENSPKIG00000001869	hsd3b2 (ENSPKIG00000001764)	ENSPKIG00000001697	ENSPKIG00000001648	HECW2 (ENSPKIG00000001547)	RSPH1 (ENSPKIG00000001483)	vps16 (ENSPKIG00000001377)	faima (ENSPKIG00000001313)	LYPD1 (ENSPKIG00000001280) #12	gpr39 (ENSPKIG00000001251) #14	SLC35F5 (ENSPKIG00000001198) #15	actr3 (ENSPKIG00000001149) #16	ddx18 (ENSPKIG00000001118) #20	ccdc93 (ENSPKIG00000001052) #21	INSIG2 (ENSPKIG00000000966) #22
Clupeocephala	ANCESTRAL SPECIES	289						ENSGT00530000063607.b.j.a #10	ENSGT00390000002215.i.a #12	ENSGT01100000263518.A.a.b #14	ENSGT00910000148192	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.A.c ##17	ENSGT00940000154657.B ##17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b
Otomorpha	ANCESTRAL SPECIES	372								ENSGT00910000148192	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.A.c ##17	ENSGT00940000154657.B ##17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00990000210518	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00390000008042.A.b.c #26	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b
Otophysi	ANCESTRAL SPECIES	298								ENSGT00910000148192	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.A.c ##17	ENSGT00940000154657.B ##17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.b #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00940000170561.a.b	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b
Characiphysae	ANCESTRAL SPECIES	3	ENSGT00390000005159.i	ENSGT00940000156444.d	ENSGT00940000155861.C.f	ENSGT00940000158239.a.a.c	ENSGT00940000158239.a.b	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.A.c ##17	ENSGT00940000154657.B ##17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.b #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT01030000235195	ENSGT00940000163460.c	ENSGT01060000248784	ENSGT00940000170561.a.b	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b	ENSGT00530000063608.B.a	ENSGT00940000158609	ENSGT00940000157526.a
Channel catfish	MODERN SPECIES	25	ENSIPUG00000011861	raph1 (ENSIPUG00000011891)	abi2a (ENSIPUG00000012006)	tmem237a (ENSIPUG00000012105)	ALS2 (ENSIPUG00000012149)	fzd7a (ENSIPUG00000012373)	fam117b (ENSIPUG00000012389)	Bmpr2 (ENSIPUG00000012409)	gpr39 (ENSIPUG00000012486) #14	slc35f5 (ENSIPUG00000012504) #15	actr3 (ENSIPUG00000012560) #16	ENSIPUG00000012623 ##17	ENSIPUG00000012829 ##17	ddx18 (ENSIPUG00000012876)	ccdc93 (ENSIPUG00000012974) #21	insig2 (ENSIPUG00000013001) #22	en1 (ENSIPUG00000013029) #23	ENSIPUG00000013048	c1ql2 (ENSIPUG00000013069) #25	ENSIPUG00000013085	ENSIPUG00000013095	steap3 (ENSIPUG00000013110) #26	c6h2orf76 (ENSIPUG00000013121) #27	dbi (ENSIPUG00000013139) #28	tmem37 (ENSIPUG00000013155) #29	sctr (ENSIPUG00000013182)	cobll1 (ENSIPUG00000013203)	GRB14 (ENSIPUG00000013209)	ENSIPUG00000013235	fign (ENSIPUG00000013276)	KCNH7 (ENSIPUG00000013299)
Characiphysae_b	ANCESTRAL SPECIES	11	ENSGT00390000005159.i	ENSGT00940000156444.d	ENSGT00940000155861.C.f	ENSGT00940000158239.a.a.c	ENSGT00940000158239.a.b	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.A.c ##17	ENSGT00940000154657.B ##17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.b #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT01030000235195	ENSGT00940000163460.c.a	ENSGT01060000248784	ENSGT00940000170561.a.b	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b	ENSGT00530000063608.B.a	ENSGT00940000158609	ENSGT00940000157526.a
Characoidei	ANCESTRAL SPECIES	1	ENSGT00940000156089.f	ENSGT00390000005159.i	ENSGT00940000156444.d	ENSGT00940000155861.C.f	ENSGT00940000158239.a.a.c	ENSGT00390000013916	ENSGT00950000183046.a.a.fb	ENSGT00940000156449.a	ENSGT01100000263518.A.a.b #14	ENSGT00390000005949 #15	ENSGT00940000155065 #16	ENSGT00940000154657.A.c ##17	ENSGT00940000154657.B ##17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.b #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT01030000235195	ENSGT00940000163460.c.a	ENSGT01060000248784	ENSGT00940000170561.a.b	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b	ENSGT00530000063608.B.a	ENSGT00940000158609	ENSGT00940000157526.a
Red-bellied piranha	MODERN SPECIES	22				FZD7 (ENSPNAG00000024668)	ENSPNAG00000024653	fam117bb (ENSPNAG00000005491)	bmpr2b (ENSPNAG00000024607)	gpr39 (ENSPNAG00000004962) #14	SLC35F5 (ENSPNAG00000024533) #15	actr3 (ENSPNAG00000024434) #16	ENSPNAG00000024385 ##17	ENSPNAG00000024306 ##17	ENSPNAG00000024274	ddx18 (ENSPNAG00000024239) #20	ccdc93 (ENSPNAG00000024210) #21	insig2 (ENSPNAG00000024171) #22	en1a (ENSPNAG00000024127) #23	ENSPNAG00000004764 #24	C1QL2 (ENSPNAG00000024092) #25	ENSPNAG00000024035	ENSPNAG00000024025	ENSPNAG00000024015	ENSPNAG00000006248	STEAP3 (ENSPNAG00000023982) #26	zgc:101851 (ENSPNAG00000005749) #27	dbi (ENSPNAG00000023932) #28	tmem37 (ENSPNAG00000023913) #29	ENSPNAG00000023907	COBLL1 (ENSPNAG00000006818)	GRB14 (ENSPNAG00000023870)	fign (ENSPNAG00000003793)
Mexicana tetra	MODERN SPECIES	10	FZD7 (ENSAMXG00000024305)	ENSAMXG00000043514	CARF (ENSAMXG00000024302)	fam117bb (ENSAMXG00000024297)	bmpr2b (ENSAMXG00000024291)	gpr39 (ENSAMXG00000036048) #14	SLC35F5 (ENSAMXG00000024287) #15	actr3 (ENSAMXG00000024286) #16	ENSAMXG00000024284 ##17	ENSAMXG00000024272 ##17	ENSAMXG00000041658	ENSAMXG00000033643	ENSAMXG00000037342	ddx18 (ENSAMXG00000024269) #20	ccdc93 (ENSAMXG00000024268) #21	insig2 (ENSAMXG00000041946) #22	en1a (ENSAMXG00000044032) #23	ENSAMXG00000024263	C1QL2 (ENSAMXG00000031667) #25	ENSAMXG00000037026	ENSAMXG00000024261	ENSAMXG00000024880	ENSAMXG00000041756	ENSAMXG00000035306	ENSAMXG00000036889	ENSAMXG00000024260	ENSAMXG00000041309	ENSAMXG00000038819	STEAP3 (ENSAMXG00000035265) #26	zgc:101851 (ENSAMXG00000039602) #27	dbi (ENSAMXG00000041202) #28
Electric eel	MODERN SPECIES	381	ihha (ENSEEEG00000018399)	mettl5 (ENSEEEG00000018402)	KLHL23 (ENSEEEG00000018408)	phgdh (ENSEEEG00000018538)	ENSEEEG00000018543	fastkd1 (ENSEEEG00000018549)	klhl41a (ENSEEEG00000018559)	bbs5 (ENSEEEG00000018562)	col28a2a (ENSEEEG00000018611)	zgc:172182 (ENSEEEG00000018614)	lrp2a (ENSEEEG00000018632)	dhrs9 (ENSEEEG00000019019)	ENSEEEG00000019020	ddx18 (ENSEEEG00000019022) #20	ccdc93 (ENSEEEG00000019079) #21	insig2 (ENSEEEG00000019419) #22	en1a (ENSEEEG00000019433) #23	ENSEEEG00000019434
Cyprinoidei	ANCESTRAL SPECIES	212																ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.b #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00940000170561.a.b	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.b #28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	210																ENSGT00580000081600.c.b.q #22	ENSGT00990000210518	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.b.d #28	ENSGT00390000006225.h #29	ENSGT00940000156402.A.b.b	ENSGT00940000160594.g.b.a.b	ENSGT00940000155318.b.a.e.b	ENSGT00940000155972.B.r	ENSGT00940000155995.e.b.b	ENSGT00940000153476.b.p.a	ENSGT00940000157974.g.a	ENSGT00940000160642.z.a	ENSGT00940000158781.e	ENSGT00940000160994.g.a
Cyprininae_a	ANCESTRAL SPECIES	222																ENSGT00580000081600.c.b.q #22	ENSGT00990000210518	ENSGT00390000015352.a #27	ENSGT00940000154846.b.d #28	ENSGT00390000006225.h #29	ENSGT00940000156402.A.b.b	ENSGT00940000160594.g.b.a.b	ENSGT00940000155318.b.a.e.b	ENSGT00940000155972.B.r	ENSGT00940000155995.e.b.b	ENSGT00940000153476.b.p.a	ENSGT00940000157974.g.a	ENSGT00940000160642.z.a	ENSGT00940000158781.e	ENSGT00940000160994.g.a	ENSGT00940000157618.v
Common carp reference	MODERN SPECIES	46	ENSCCRG00000033868	ENSCCRG00000002228	ENSCCRG00000030050	ENSCCRG00000019249	ENSCCRG00000082366	ENSCCRG00000061787	ENSCCRG00000041891	ENSCCRG00000041897	ENSCCRG00000077311	ENSCCRG00000018398	ENSCCRG00000018404	ENSCCRG00000079360	ENSCCRG00000045787	ybey (ENSCCRG00000037152)	usp37 (ENSCCRG00000037144)	insig2 (ENSCCRG00000046577) #22	en1a (ENSCCRG00000046568) #23	ENSCCRG00000046562 #24	C1QL2 (ENSCCRG00000071761) #25	ENSCCRG00000077247	ENSCCRG00000079837	ENSCCRG00000064516	ENSCCRG00000034444	ENSCCRG00000079733	ENSCCRG00000057401	ENSCCRG00000039058	zgc:101851 (ENSCCRG00000024056) #27	dbi (ENSCCRG00000052059) #28	tmem37 (ENSCCRG00000052058) #29	ENSCCRG00000030205	ENSCCRG00000071695
Golden-line barbel	MODERN SPECIES	382	ENSSGRG00000054322	ENSSGRG00000054321	ENSSGRG00000054320	ENSSGRG00000054318	ENSSGRG00000054315	ENSSGRG00000054314	ft1 (ENSSGRG00000054313)	ENSSGRG00000054312	ENSSGRG00000054310	ENSSGRG00000054309	DIP2A (ENSSGRG00000053970)	ndufb3 (ENSSGRG00000053923)	YBEY (ENSSGRG00000053922)	ENSSGRG00000053921	usp37 (ENSSGRG00000053908)	insig2 (ENSSGRG00000053903) #22	ENSSGRG00000053902	ENSSGRG00000053900 #24	ENSSGRG00000053899 #25	ENSSGRG00000053898
Goldfish	MODERN SPECIES	49	ENSCARG00000040218	ENSCARG00000040340	ENSCARG00000040367	ENSCARG00000040397	ENSCARG00000040421	ENSCARG00000040430	ENSCARG00000040586	ENSCARG00000040615	ENSCARG00000040649	ENSCARG00000040659	DIP2A (ENSCARG00000041000)	ENSCARG00000052363	ndufb3 (ENSCARG00000052374)	ybey (ENSCARG00000052393)	usp37 (ENSCARG00000052424)	insig2 (ENSCARG00000052545) #22	en1a (ENSCARG00000052604) #23	ENSCARG00000052618 #24	C1QL2 (ENSCARG00000052630) #25	ENSCARG00000052695	ENSCARG00000052770	ENSCARG00000052801	agps (ENSCARG00000052897)	nfe2l2a (ENSCARG00000053298)	hnrnpa3 (ENSCARG00000053330)	hoxd3a (ENSCARG00000053452)	hoxd4a (ENSCARG00000053463)	hoxd9a (ENSCARG00000053478)	hoxd10a (ENSCARG00000053495)	hoxd11a (ENSCARG00000053512)	hoxd12a (ENSCARG00000053524)
Cyprininae	ANCESTRAL SPECIES	448	ENSGT00990000204171.a.a.a	ENSGT01030000235037.b	ENSGT00940000158367.f.e	ENSGT00940000155177.a.c	ENSGT00940000165332.B.c	ENSGT00940000164866.u.a	ENSGT00950000182997.a.b.b.a.g.b	ENSGT00530000064199.d.c	ENSGT00390000010316.gb	ENSGT00950000182997.a.b.b.a.h	ENSGT00530000064199.d.d	ENSGT00390000010316.hb	ENSGT00950000183170.b.b	ENSGT00940000158091.c	ENSGT00940000158091.d	ENSGT00580000081600.c.b.r #22	ENSGT00940000160811.c.b #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b.a.b #25	ENSGT00940000170561.a.b
Cyprininae_a	ANCESTRAL SPECIES	237	ENSGT00390000012561.b.qb.b	ENSGT00990000204171.a.a.a	ENSGT01030000234540.A.b	ENSGT01030000235037.a.a	ENSGT00940000158367.f.e	ENSGT00940000155177.a.d.a	ENSGT00940000165332.B.c	ENSGT00940000164866.u.a.a	ENSGT00950000182997.a.b.b.a.h	ENSGT00530000064199.d.d	ENSGT00390000010316.hb	ENSGT00390000010316.gb	ENSGT00950000183170.b.b	ENSGT00940000158091.c	ENSGT00940000158091.d	ENSGT00580000081600.c.b.r #22	ENSGT00940000160811.c.b #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b.a.b #25	ENSGT00940000170561.a.b	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352.b #27	ENSGT00940000154846.b.c #28	ENSGT00390000006225.g #29	ENSGT00940000156402.A.b.a	ENSGT00950000182897.B.a.b.b.a	ENSGT00940000160594.g.b.a.a	ENSGT00940000155318.b.a.f
Golden-line barbel	MODERN SPECIES	379	EPHA3 (ENSSGRG00000038642)	C3orf38 (ENSSGRG00000038644)	MYO1B (ENSSGRG00000038736)	ENSSGRG00000042160	bzw1b (ENSSGRG00000042164)	ENSSGRG00000042268	ENSSGRG00000042269	ENSSGRG00000042272	ENSSGRG00000042274	ENSSGRG00000042275	DIP2A (ENSSGRG00000042333)	ENSSGRG00000043579	ndufb3 (ENSSGRG00000043580)	ENSSGRG00000043581	usp37 (ENSSGRG00000043585)	insig2 (ENSSGRG00000043646) #22	ENSSGRG00000043656 #24	C1QL2 (ENSSGRG00000043657) #25	ENSSGRG00000043661	ENSSGRG00000043662	ENSSGRG00000043665	ENSSGRG00000043666	STEAP3 (ENSSGRG00000043667) #26	zgc:101851 (ENSSGRG00000043668) #27	dbi (ENSSGRG00000043669) #28	tmem37 (ENSSGRG00000043672) #29	ENSSGRG00000043674	ENSSGRG00000043675	ENSSGRG00000043679	ENSSGRG00000043682	ENSSGRG00000043685
Common carp reference	MODERN SPECIES	41	MYCBP2 (ENSCCRG00000061257)	ENSCCRG00000034195	ENSCCRG00000063765	ENSCCRG00000002513	ENSCCRG00000033826	ENSCCRG00000033681	ENSCCRG00000032816	ENSCCRG00000054039	ENSCCRG00000032773	ENSCCRG00000011348	ENSCCRG00000045758	ENSCCRG00000076276	ENSCCRG00000008990	ndufb3 (ENSCCRG00000009593)	usp37 (ENSCCRG00000009583)	insig2 (ENSCCRG00000009578) #22	en1a (ENSCCRG00000036778) #23	ENSCCRG00000041319	C1QL2 (ENSCCRG00000074441) #25	ENSCCRG00000040231	ENSCCRG00000071914	ENSCCRG00000054643	ENSCCRG00000061642	STEAP3 (ENSCCRG00000024054) #26	zgc:101851 (ENSCCRG00000056268) #27	dbi (ENSCCRG00000024059) #28	tmem37 (ENSCCRG00000018923) #29	ENSCCRG00000018918	ENSCCRG00000066267	ENSCCRG00000025500	MBNL2 (ENSCCRG00000081713)
Goldfish	MODERN SPECIES	27	STX19 (ENSCARG00000056490)	EPHA3 (ENSCARG00000055966)	C3orf38 (ENSCARG00000055920)	MYO1B (ENSCARG00000053540)	ENSCARG00000053376	ENSCARG00000053369	ENSCARG00000053365	ENSCARG00000053350	bzw1b (ENSCARG00000053162)	ENSCARG00000053139	ENSCARG00000053136	DIP2A (ENSCARG00000038723)	ENSCARG00000038155	ndufb3 (ENSCARG00000038139)	usp37 (ENSCARG00000037978)	insig2 (ENSCARG00000037914) #22	ENSCARG00000037856	C1QL2 (ENSCARG00000037826) #25	ENSCARG00000037811	ENSCARG00000037772	ENSCARG00000037749	ENSCARG00000037732	STEAP3 (ENSCARG00000037697) #26	ENSCARG00000037523	dbi (ENSCARG00000037488) #28	tmem37 (ENSCARG00000037480) #29	ENSCARG00000037474	ENSCARG00000037411	RAP2A (ENSCARG00000037391)	ENSCARG00000037375	ENSCARG00000037315
Zebrafish	MODERN SPECIES	24	zgc:158320 (ENSDARG00000099373)	ENSDARG00000099207	bzw1b (ENSDARG00000099148)	ENSDARG00000098461	igsf3l (ENSDARG00000104716)	ENSDARG00000099799	ENSDARG00000100887	ENSDARG00000078172	ENSDARG00000098640	ENSDARG00000098204	DIP2A (ENSDARG00000078058)	ENSDARG00000074802	ndufb3 (ENSDARG00000075709)	ybey (ENSDARG00000011999)	usp37 (ENSDARG00000040990)	insig2 (ENSDARG00000113367) #22	en1a (ENSDARG00000014321) #23	ENSDARG00000059294	C1QL2 (ENSDARG00000015592) #25	ENSDARG00000097420	STEAP3 (ENSDARG00000075641) #26	C9H2orf76 (ENSDARG00000037199) #27	dbi (ENSDARG00000026369) #28	tmem37 (ENSDARG00000059305) #29	sctr (ENSDARG00000101077)	ENSDARG00000077553	ENSDARG00000112056	DOCK9 (ENSDARG00000114086)	SLC15A1 (ENSDARG00000100315)	stk24a (ENSDARG00000100955)	INO80D (ENSDARG00000104727)
Clupeiformes	ANCESTRAL SPECIES	497											ENSGT00940000155065 #16	ENSGT00940000154657.A.c ##17	ENSGT00940000154657.B ##17	ENSGT00680000100037 #20	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000156913.b.j.b #25	ENSGT00940000170561.a.b
Denticle herring	MODERN SPECIES	12	ENSDCDG00000031582	ENSDCDG00000031587	ENSDCDG00000031590	ENSDCDG00000031594	ENSDCDG00000031598	slc52a2 (ENSDCDG00000031600)	nfatc1 (ENSDCDG00000031606)	atp9b (ENSDCDG00000031729)	ENSDCDG00000033488	ENSDCDG00000033491	actr3 (ENSDCDG00000033512) #16	ENSDCDG00000033821 ##17	ENSDCDG00000034555 ##17	ddx18 (ENSDCDG00000034704) #20	ccdc93 (ENSDCDG00000034741) #21	insig2 (ENSDCDG00000034849) #22	C1QL2 (ENSDCDG00000034850) #25	ENSDCDG00000034851	dbi (ENSDCDG00000034852) ##28	rab5b (ENSDCDG00000034854)	dbr1 (ENSDCDG00000034859)	armc8 (ENSDCDG00000034867)	ENSDCDG00000035004	idh1 (ENSDCDG00000035020)	PLEKHM3 (ENSDCDG00000035092)	ENSDCDG00000035094	ccnyl1 (ENSDCDG00000035108)	creb1b (ENSDCDG00000035137)	klf7b (ENSDCDG00000035138)	ENSDCDG00000035139	zgc:162780 (ENSDCDG00000035140)
Euteleosteomorpha	ANCESTRAL SPECIES	321															ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b
Acanthomorphata	ANCESTRAL SPECIES	72	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000016547	ENSGT00940000158449	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b
Cod	MODERN SPECIES	12	ENSGMOG00000025637	ENSGMOG00000036274	ENSGMOG00000022561	ENSGMOG00000001953	RSPH1 (ENSGMOG00000019274)	slc37a1 (ENSGMOG00000019504)	PDE9A (ENSGMOG00000018112)	wdr4 (ENSGMOG00000018145)	ENSGMOG00000034690	ENSGMOG00000032378	pknox1.1 (ENSGMOG00000018171)	ENSGMOG00000018189	ENSGMOG00000036933	CCDC93 (ENSGMOG00000018223) #21	ENSGMOG00000026529	INSIG2 (ENSGMOG00000018264) #22	EN1 (ENSGMOG00000033160) #23	C1QL2 (ENSGMOG00000031902) #25	STEAP3 (ENSGMOG00000037245) #26	zgc:101851 (ENSGMOG00000001591) #27	dbi (ENSGMOG00000015488) ##28	ENSGMOG00000001641	ENSGMOG00000001674	ENSGMOG00000022602	ENSGMOG00000029793	ENSGMOG00000027594	ENSGMOG00000010335	ENSGMOG00000015039	slc10a2 (ENSGMOG00000004471)	gtpbp8 (ENSGMOG00000004456)	efnb2a (ENSGMOG00000028436)
Euacanthomorphacea	ANCESTRAL SPECIES	43	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b
Pinecone sodierfish	MODERN SPECIES	13	TMEM50B (ENSMMDG00005014156)	TRIM8 (ENSMMDG00005014165)	ENSMMDG00005014195	dcp2 (ENSMMDG00005014198)	zmat5 (ENSMMDG00005014200)	RSPH1 (ENSMMDG00005014202)	slc37a1 (ENSMMDG00005014287)	PDE9A (ENSMMDG00005017652)	wdr4 (ENSMMDG00005017727)	ENSMMDG00005017734	pknox1.1 (ENSMMDG00005017741)	ENSMMDG00005017746	ENSMMDG00005017749	ccdc93 (ENSMMDG00005017767) #21	si:dkey-251i10.3 (ENSMMDG00005018343)	insig2 (ENSMMDG00005018351) #22	EN1 (ENSMMDG00005018359) #23	ENSMMDG00005018365	ENSMMDG00005018382 #24	ENSMMDG00005018386 #24	ENSMMDG00005018396 #24	C1QL2 (ENSMMDG00005018409) #25	STEAP3 (ENSMMDG00005018429) #26	zgc:101851 (ENSMMDG00005018561) #27	dbi (ENSMMDG00005018563) ##28	tmem37 (ENSMMDG00005018565) #29	ENSMMDG00005018567	ENSMMDG00005018569	ENSMMDG00005018570	ENSMMDG00005018571	ENSMMDG00005018573
Percomorphaceae	ANCESTRAL SPECIES	43	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00990000210518	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000156402.A.b	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00990000210518	ENSGT00390000000220.B.c.b	ENSGT00390000015050.`b.a	ENSGT00530000063686.a.a	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p	ENSGT00940000154846.a.b ##28	ENSGT00390000015352 #27	ENSGT00390000008042.A.b.c #26	ENSGT00940000156913.b.j.b #25	ENSGT00950000183074.C #24	ENSGT00940000160811.c.a #23
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00990000210518	ENSGT00390000000220.B.c.b	ENSGT00390000015050.`b.a	ENSGT00530000063686.a.a	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p	ENSGT00940000154846.a.b ##28	ENSGT00390000015352 #27	ENSGT00390000008042.A.b.c #26	ENSGT00940000156913.b.j.b #25	ENSGT00950000183074.C #24	ENSGT00940000160811.c.a #23
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00530000063686.a.a	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00990000210518	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p	ENSGT00940000154846.a.b ##28	ENSGT00390000015352 #27	ENSGT00390000008042.A.b.c #26	ENSGT00940000156913.b.j.b #25	ENSGT00950000183074.C #24	ENSGT00940000160811.c.a #23
Anabantaria	ANCESTRAL SPECIES	45	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a
Anabantoidei	ANCESTRAL SPECIES	37	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28
Climbing perch	MODERN SPECIES	12	IL10RB (ENSATEG00000025353)	ENSATEG00000004984	ENSATEG00000028377	TMEM50B (ENSATEG00000005026)	ENSATEG00000026252	ENSATEG00000005045	slc37a1 (ENSATEG00000005050)	PDE9A (ENSATEG00000005121)	wdr4 (ENSATEG00000005195)	ENSATEG00000005206	ENSATEG00000005228	pknox1.1 (ENSATEG00000005278)	ENSATEG00000005294	CCDC93 (ENSATEG00000005402) #21	ENSATEG00000005429	INSIG2 (ENSATEG00000029786) #22	EN1 (ENSATEG00000005465) #23	MARCO (ENSATEG00000005491) #24	C1QL2 (ENSATEG00000005501) #25	ENSATEG00000005582 #27	ENSATEG00000005619 ##28	ENSATEG00000005649	ENSATEG00000005666	ENSATEG00000027703	ENSATEG00000005727	arglu1a (ENSATEG00000005743)	efnb2a (ENSATEG00000030016)	gtpbp8 (ENSATEG00000005805)	slc10a2 (ENSATEG00000025740)	ENSATEG00000026038	ENSATEG00000027382
Siamese fighting fish	MODERN SPECIES	11	ENSBSLG00000024580	ENSBSLG00000024589	parp14rs1 (ENSBSLG00000024593)	esyt3 (ENSBSLG00000024608)	DNAH7 (ENSBSLG00000024864)	ENSBSLG00000025385	tmeff2a (ENSBSLG00000004942)	cavin2a (ENSBSLG00000004991)	wdr4 (ENSBSLG00000004997)	ENSBSLG00000005048	ENSBSLG00000005135	pknox1.1 (ENSBSLG00000005166)	ENSBSLG00000005283	ccdc93 (ENSBSLG00000005547) #21	si:dkey-251i10.3 (ENSBSLG00000006076)	insig2 (ENSBSLG00000006324) #22	ENSBSLG00000006380	EN1 (ENSBSLG00000006407) #23	ENSBSLG00000006433	mmadhcb (ENSBSLG00000006488)	C1QL2 (ENSBSLG00000006627) #25	DBI (ENSBSLG00000006649) ##28	ENSBSLG00000006732	ENSBSLG00000006932	ENSBSLG00000007000	ENSBSLG00000007024	ENSBSLG00000007040	ENSBSLG00000007189	UBXN4 (ENSBSLG00000009696)	ENSBSLG00000009720	ENSBSLG00000009746
Zig-zag eel	MODERN SPECIES	13	ENSMAMG00000007035	ENSMAMG00000007055	ENSMAMG00000007072	ENSMAMG00000007088	TMEM50B (ENSMAMG00000025738)	ENSMAMG00000007131	slc37a1 (ENSMAMG00000007150)	PDE9A (ENSMAMG00000007219)	wdr4 (ENSMAMG00000007247)	ENSMAMG00000007263	pknox1.1 (ENSMAMG00000007305)	ENSMAMG00000007351	ENSMAMG00000024410	CCDC93 (ENSMAMG00000007390) #21	ENSMAMG00000025535	INSIG2 (ENSMAMG00000026450) #22	EN1 (ENSMAMG00000007474) #23	ENSMAMG00000007507	ENSMAMG00000007522 #25	ENSMAMG00000007555 #27	ENSMAMG00000007587 ##28	ENSMAMG00000008526	ENSMAMG00000008539	ENSMAMG00000008574	ENSMAMG00000026151	arglu1a (ENSMAMG00000024802)	efnb2a (ENSMAMG00000026875)	ENSMAMG00000026788	ENSMAMG00000008656	gtpbp8 (ENSMAMG00000008709)	slc10a2 (ENSMAMG00000028476)
Carangaria	ANCESTRAL SPECIES	12	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00990000210518	ENSGT00940000154846.a.b ##28	ENSGT00390000015352 #27	ENSGT00390000008042.A.b.c #26	ENSGT00940000156913.b.j.b #25	ENSGT00950000183074.C #24	ENSGT00940000168180.a	ENSGT00940000160811.c.a #23
Carangaria_A	ANCESTRAL SPECIES	67	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00990000210518	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28
Seriola	ANCESTRAL SPECIES	95	ENSGT00530000063686.a.a	ENSGT00940000157541.f.d	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00940000168180.a	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28
Greater amberjack	MODERN SPECIES	79	zgc:113274 (ENSSDUG00000000610)	ENSSDUG00000000604	ENSSDUG00000000592	TMEM50B (ENSSDUG00000000569)	ENSSDUG00000000551	slc37a1 (ENSSDUG00000000459)	PDE9A (ENSSDUG00000000390)	wdr4 (ENSSDUG00000000378)	ENSSDUG00000000365	ENSSDUG00000000357	pknox1.1 (ENSSDUG00000000309)	ENSSDUG00000000250	ENSSDUG00000000207	ccdc93 (ENSSDUG00000000195) #21	si:dkey-251i10.3 (ENSSDUG00000000153)	insig2 (ENSSDUG00000000106) #22	EN1 (ENSSDUG00000021985) #23	ENSSDUG00000021976	ENSSDUG00000021970	ENSSDUG00000021967	C1QL2 (ENSSDUG00000021952) #25	STEAP3 (ENSSDUG00000021946) #26	ENSSDUG00000021943	zgc:101851 (ENSSDUG00000021937) #27	dbi (ENSSDUG00000021932) ##28	ENSSDUG00000021929	ENSSDUG00000021607	ENSSDUG00000021566
Yellowtail amberjack	MODERN SPECIES	2968	TMEM50B (ENSSLDG00000002565)	ENSSLDG00000002538	ENSSLDG00000002513	ENSSLDG00000002484	slc37a1 (ENSSLDG00000002364)	PDE9A (ENSSLDG00000002241)	wdr4 (ENSSLDG00000002222)	ENSSLDG00000002194	ENSSLDG00000002177	pknox1.1 (ENSSLDG00000002133)	ENSSLDG00000002107	ENSSLDG00000002094	ENSSLDG00000002027	ccdc93 (ENSSLDG00000001983) #21	si:dkey-251i10.3 (ENSSLDG00000001899)	insig2 (ENSSLDG00000001871) #22	EN1 (ENSSLDG00000001864) #23	ENSSLDG00000001757	C1QL2 (ENSSLDG00000001685) #25	STEAP3 (ENSSLDG00000001677) #26	zgc:101851 (ENSSLDG00000001607) #27	dbi (ENSSLDG00000001582) ##28	ECHS1 (ENSSLDG00000001555)	ENSSLDG00000001513	ENSSLDG00000001420	ENSSLDG00000001407
Barramundi perch	MODERN SPECIES	280	ENSLCAG00010014587	ENSLCAG00010014585	ifngr2 (ENSLCAG00010014581)	TMEM50B (ENSLCAG00010014578)	ENSLCAG00010014570	slc37a1 (ENSLCAG00010014559)	PDE9A (ENSLCAG00010014540)	wdr4 (ENSLCAG00010014533)	ENSLCAG00010014529	ENSLCAG00010014524	pknox1.1 (ENSLCAG00010014513)	ENSLCAG00010014505	ENSLCAG00010014502	ccdc93 (ENSLCAG00010014468) #21	si:dkey-251i10.3 (ENSLCAG00010014457)	insig2 (ENSLCAG00010014449) #22	ENSLCAG00010014447	MARCO (ENSLCAG00010014442) #24	C1QL2 (ENSLCAG00010014437) #25	STEAP3 (ENSLCAG00010014434) #26	C2orf76 (ENSLCAG00010014433) #27	DBI (ENSLCAG00010014424) ##28
Pleuronectoidei	ANCESTRAL SPECIES	105			ENSGT00940000158406	ENSGT00510000051617	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00390000015352 #27
Turbot	MODERN SPECIES	5		ENSSMAG00000017396	ENSSMAG00000017407	ENSSMAG00000017421	ENSSMAG00000017442	slc37a1 (ENSSMAG00000017478)	PDE9A (ENSSMAG00000017545)	WDR4 (ENSSMAG00000017602)	ENSSMAG00000017631	ENSSMAG00000017647	pknox1.1 (ENSSMAG00000017657)	ENSSMAG00000017688	ENSSMAG00000017708	CCDC93 (ENSSMAG00000017723) #21	ENSSMAG00000017825	INSIG2 (ENSSMAG00000017830) #22	EN1 (ENSSMAG00000017852) #23	ENSSMAG00000017871	ENSSMAG00000017946 #27	ENSSMAG00000017965	ENSSMAG00000017996	wdr75 (ENSSMAG00000018077)	slc40a1 (ENSSMAG00000018101)	ENSSMAG00000023696	asnsd1 (ENSSMAG00000018175)	zgc:136439 (ENSSMAG00000036219)	ENSSMAG00000018130	ENSSMAG00000018181 #15	GPR39 (ENSSMAG00000018209) #14	ENSSMAG00000032067 #12	ENSSMAG00000018240 #10
Eupercaria	ANCESTRAL SPECIES	25	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a
Eupecaria_A	ANCESTRAL SPECIES	24	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00940000170936	ENSGT00940000172822	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a
Ballan wrasse	MODERN SPECIES	78			efnb2a (ENSLBEG00000021343)	arglu1a (ENSLBEG00000021379)	RRP1 (ENSLBEG00000021417)	slc37a1 (ENSLBEG00000021479)	PDE9A (ENSLBEG00000021554)	wdr4 (ENSLBEG00000021605)	ENSLBEG00000021633	ENSLBEG00000021668	pknox1.1 (ENSLBEG00000021695)	TMPRSS3 (ENSLBEG00000021752)	ENSLBEG00000021837	ccdc93 (ENSLBEG00000021931) #21	si:dkey-251i10.3 (ENSLBEG00000022133)	insig2 (ENSLBEG00000022277) #22	EN1 (ENSLBEG00000022326) #23	ENSLBEG00000022340	gja1b (ENSLBEG00000022370)	C1QL2 (ENSLBEG00000022410) #25	esd (ENSLBEG00000022454)	HTR2A (ENSLBEG00000022509)	sucla2 (ENSLBEG00000022560)	med4 (ENSLBEG00000022667)	itm2bb (ENSLBEG00000022694)	ENSLBEG00000022721	ENSLBEG00000022745	alg11 (ENSLBEG00000022778)	lcp1 (ENSLBEG00000022808)	cnot11 (ENSLBEG00000022855)	ABI2 (ENSLBEG00000022910)
Eupecaria_B	ANCESTRAL SPECIES	24	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a
Perciformes	ANCESTRAL SPECIES	23	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a
Cottioidei	ANCESTRAL SPECIES	30	ENSGT00940000173067	ENSGT00940000160205	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00940000154846.a.b ##28	ENSGT00390000015352 #27	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a
Lumpfish	MODERN SPECIES	13						ENSCLMG00005008537	PDE9A (ENSCLMG00005008149)	wdr4 (ENSCLMG00005008145)	ENSCLMG00005008143	ENSCLMG00005008142	pknox1.1 (ENSCLMG00005008140)	TMPRSS3 (ENSCLMG00005008132)	ENSCLMG00005008127	ccdc93 (ENSCLMG00005007955) #21	si:dkey-251i10.3 (ENSCLMG00005007949)	insig2 (ENSCLMG00005007948) #22	EN1 (ENSCLMG00005007946) #23	ENSCLMG00005007892 #24	C1QL2 (ENSCLMG00005007890) #25	DBI (ENSCLMG00005007888) ##28	zgc:101851 (ENSCLMG00005007887) #27	ENSCLMG00005007886	rnpc3 (ENSCLMG00005007884)	ENSCLMG00005004178	ENSCLMG00005004155	mmadhcb (ENSCLMG00005004153)	ENSCLMG00005004152	slc10a2 (ENSCLMG00005004144)	gtpbp8 (ENSCLMG00005004140)	ENSCLMG00005004138	efnb2a (ENSCLMG00005004136)
Stickleback	MODERN SPECIES	16	ENSGACG00000001424	ENSGACG00000001427	ENSGACG00000001430	ENSGACG00000001431	ENSGACG00000001436	ENSGACG00000001438	slc37a1 (ENSGACG00000001446)	PDE9A (ENSGACG00000001450)	wdr4 (ENSGACG00000001454)	ENSGACG00000001455	pknox1.1 (ENSGACG00000001456)	TMPRSS3 (ENSGACG00000001457)	ENSGACG00000001462	ccdc93 (ENSGACG00000001463) #21	si:dkey-251i10.3 (ENSGACG00000001488)	insig2 (ENSGACG00000001491) #22	EN1 (ENSGACG00000001508) #23	ENSGACG00000001509 #24	DBI (ENSGACG00000001512) ##28	zgc:101851 (ENSGACG00000001517) #27	ENSGACG00000001519	UBXN4 (ENSGACG00000001530)	ENSGACG00000001531	ENSGACG00000001532	ENSGACG00000001533	ENSGACG00000001535	ENSGACG00000001536	ENSGACG00000001537	arglu1a (ENSGACG00000001538)	efnb2a (ENSGACG00000001539)	gtpbp8 (ENSGACG00000001542)
Perciformes_a	ANCESTRAL SPECIES	23	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a
Pike perch	MODERN SPECIES	80	ENSSLUG00000014625	dnajc3a (ENSSLUG00000014547)	ENSSLUG00000014521	TMEM50B (ENSSLUG00000014512)	ENSSLUG00000014494	slc37a1 (ENSSLUG00000012584)	PDE9A (ENSSLUG00000012124)	wdr4 (ENSSLUG00000012108)	ENSSLUG00000012103	ENSSLUG00000015028	pknox1.1 (ENSSLUG00000015024)	TMPRSS3 (ENSSLUG00000015014)	ENSSLUG00000015006	ccdc93 (ENSSLUG00000014346) #21	si:dkey-251i10.3 (ENSSLUG00000014282)	insig2 (ENSSLUG00000014155) #22	EN1 (ENSSLUG00000014137) #23	MARCO (ENSSLUG00000014133) #24	C1QL2 (ENSSLUG00000014128) #25	ENSSLUG00000012780	ENSSLUG00000012717	ENSSLUG00000012702	mmadhcb (ENSSLUG00000012693)	DBI (ENSSLUG00000012687) ##28	zgc:101851 (ENSSLUG00000012683) #27	STEAP3 (ENSSLUG00000012681) #26	ENSSLUG00000010192	ENSSLUG00000010088	ENSSLUG00000010046	wdr75 (ENSSLUG00000009995)	slc40a1 (ENSSLUG00000009979)
Channel bull blenny	MODERN SPECIES	13	ENSCGOG00000013575	ENSCGOG00000013571	ENSCGOG00000013568	ENSCGOG00000013564	ENSCGOG00000013559	slc37a1 (ENSCGOG00000012859)	PDE9A (ENSCGOG00000012727)	wdr4 (ENSCGOG00000010355)	ENSCGOG00000010352	ENSCGOG00000010351	pknox1.1 (ENSCGOG00000010339)	TMPRSS3 (ENSCGOG00000010336)	ENSCGOG00000010335	ccdc93 (ENSCGOG00000010209) #21	si:dkey-251i10.3 (ENSCGOG00000010203)	insig2 (ENSCGOG00000010172) #22	EN1 (ENSCGOG00000010167) #23	ENSCGOG00000010165 #24	ENSCGOG00000010164	C1QL2 (ENSCGOG00000010160) #25	ENSCGOG00000010158 #26	zgc:101851 (ENSCGOG00000010150) #27	DBI (ENSCGOG00000010149) ##28	ENSCGOG00000009961	UBXN4 (ENSCGOG00000009890)	ENSCGOG00000009875	mmadhcb (ENSCGOG00000009872)	ENSCGOG00000009868	ENSCGOG00000009860	ENSCGOG00000009856	ENSCGOG00000009851
Eupecaria_C	ANCESTRAL SPECIES	24	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000164697.a	ENSGT01100000263523.A.z.d.g.a	ENSGT00940000171516	ENSGT01040000242008	ENSGT01100000263532.A.a.a.b.b.a.b	ENSGT01100000263532.A.a.a.b.b.b	ENSGT01100000263532.A.a.a.a.b.a.b	ENSGT01100000263532.A.a.a.a.b.b	ENSGT01100000263523.G.a.a.d	ENSGT01100000263523.A.z.d.h
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	56	ENSGT00940000157314.B	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00940000159505	ENSGT00940000158589.b.b	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000164697.a	ENSGT01040000242008	ENSGT01100000263532.A.a.a.b.b.a.b	ENSGT01100000263532.A.a.a.b.b.b	ENSGT01100000263532.A.a.a.a.b.a.b	ENSGT01100000263532.A.a.a.a.b.b	ENSGT01100000263523.G.a.a.d	ENSGT01100000263523.A.z.d.h	ENSGT01100000263532.A.a.b.i	ENSGT01100000263523.G.b
European seabass	MODERN SPECIES	5	ENSDLAG00005014498	tfcp2l1 (ENSDLAG00005014406)	ENSDLAG00005000963	ENSDLAG00005000440	ENSDLAG00005032744	ENSDLAG00005000428	ENSDLAG00005000423	SLC37A1 (ENSDLAG00005000308)	wdr4 (ENSDLAG00005000167)	ENSDLAG00005030499	ENSDLAG00005035058	ENSDLAG00005028215	PKNOX1 (ENSDLAG00005028341)	CCDC93 (ENSDLAG00005024259) #21	ENSDLAG00005030676	INSIG2 (ENSDLAG00005024199) #22	EN1 (ENSDLAG00005031117) #23	MARCO (ENSDLAG00005024175) #24	C1QL2 (ENSDLAG00005034792) #25	STEAP3 (ENSDLAG00005024165) #26	ENSDLAG00005034524 #27	ENSDLAG00005030379	ENSDLAG00005027189	ENSDLAG00005024149	ENSDLAG00005024148	ENSDLAG00005024141	ENSDLAG00005024125	ENSDLAG00005031008	ENSDLAG00005024116	ENSDLAG00005024109	ENSDLAG00005024103
Large yellow croaker	MODERN SPECIES	490	ENSLCRG00005010353	il10rb (ENSLCRG00005010356)	ENSLCRG00005010358	TMEM50B (ENSLCRG00005010359)	ENSLCRG00005010365	ccdc93 (ENSLCRG00005010392) #21	ENSLCRG00005011159	ENSLCRG00005011161	pknox1.1 (ENSLCRG00005011166)	ENSLCRG00005011206	ENSLCRG00005011214	WDR4 (ENSLCRG00005011217)	PDE9A (ENSLCRG00005011218)	slc37a1 (ENSLCRG00005011230)	si:dkey-251i10.3 (ENSLCRG00005011596)	insig2 (ENSLCRG00005011599) #22	marco (ENSLCRG00005011637) #24	EN1 (ENSLCRG00005011641) #23	C1QL2 (ENSLCRG00005011643) #25	TMPRSS3 (ENSLCRG00005011667)	STEAP3 (ENSLCRG00005011669) #26	C2orf76 (ENSLCRG00005011670) #27	ENSLCRG00005011673	ENSLCRG00005011675	ENSLCRG00005011676	ENSLCRG00005011678	ENSLCRG00005011681	ENSLCRG00005011682	ENSLCRG00005011684	ENSLCRG00005011692	ENSLCRG00005011696
Gilthead seabream	MODERN SPECIES	23	ENSSAUG00010022376	ENSSAUG00010022381	slc37a1 (ENSSAUG00010022400)	PDE9A (ENSSAUG00010022783)	wdr4 (ENSSAUG00010022796)	ENSSAUG00010001316	NDUFV3 (ENSSAUG00010001379)	pknox1.1 (ENSSAUG00010001426)	ENSSAUG00010001473	ENSSAUG00010001476	ccdc93 (ENSSAUG00010001670) #21	si:dkey-251i10.3 (ENSSAUG00010002484)	si:dkey-251i10.3 (ENSSAUG00010002487)	ENSSAUG00010002502	ENSSAUG00010002508	insig2 (ENSSAUG00010002512) #22	ENSSAUG00010002525	EN1 (ENSSAUG00010002527) #23	ENSSAUG00010002529 #24	MARCO (ENSSAUG00010002531) #24	C1QL2 (ENSSAUG00010002533) #25	STEAP3 (ENSSAUG00010002542) #26	zgc:101851 (ENSSAUG00010002545) #27	ENSSAUG00010002548	ENSSAUG00010002549	ENSSAUG00010002550	ENSSAUG00010002551	ENSSAUG00010002554	ENSSAUG00010002563	ENSSAUG00010002599	ENSSAUG00010002611
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00390000001083	ENSGT00940000155868.f	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00940000159505	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT01100000263523.A.z.d.h	ENSGT01100000263532.B.a.a	ENSGT01100000263523.F
Tetraodon	MODERN SPECIES	13	actr3 (ENSTNIG00000017835) #16	ddx18 (ENSTNIG00000017834) #20	zgc:172295 (ENSTNIG00000017833)	ENSTNIG00000017832	nifk (ENSTNIG00000017831)	clasp1a (ENSTNIG00000017830)	tfcp2l1 (ENSTNIG00000017829)	ENSTNIG00000017828	inhbb (ENSTNIG00000000778)	ENSTNIG00000000433	ENSTNIG00000017827	slc10a2 (ENSTNIG00000017826)	gtpbp8 (ENSTNIG00000017825)	efnb2a (ENSTNIG00000017824)	si:dkey-251i10.3 (ENSTNIG00000005975)	insig2 (ENSTNIG00000005976) #22
Fugu	MODERN SPECIES		ENSTRUG00000030055	ENSTRUG00000017620	ENSTRUG00000017619	il10rb (ENSTRUG00000022369)	ifngr2 (ENSTRUG00000017603)	TMEM50B (ENSTRUG00000024423)	ENSTRUG00000017592	slc37a1 (ENSTRUG00000017573)	PDE9A (ENSTRUG00000027030)	wdr4 (ENSTRUG00000002237)	ENSTRUG00000026567	pknox1.1 (ENSTRUG00000032588)	ENSTRUG00000023987	ccdc93 (ENSTRUG00000014114) #21	si:dkey-251i10.3 (ENSTRUG00000014271)	insig2 (ENSTRUG00000014294) #22	EN1 (ENSTRUG00000014340) #23	ENSTRUG00000022399 #24	C1QL2 (ENSTRUG00000001345) #25	ENSTRUG00000001339 #27	ENSTRUG00000031007	ENSTRUG00000024208	ENSTRUG00000028153	ENSTRUG00000032688	ENSTRUG00000031221	ENSTRUG00000027236	ENSTRUG00000032874	ENSTRUG00000031169	ENSTRUG00000031381	ENSTRUG00000027907	ENSTRUG00000029102
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00970000196894	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p	ENSGT00940000154846.a.b ##28	ENSGT00390000015352 #27
Atherinomorphae	ANCESTRAL SPECIES	68					ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00390000015352 #27
Cyprinodontiformes	ANCESTRAL SPECIES	48	ENSGT00940000154486.b.b.a.b	ENSGT00940000154486.b.a.a.b.e.a.a.a	ENSGT00390000016151	ENSGT00940000160532.h	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00940000160205	ENSGT01090000259987.a.a.a.p	ENSGT00940000154846.a.b ##28	ENSGT00390000015352 #27
Aplocheiloidei	ANCESTRAL SPECIES	104	ENSGT00940000154486.b.b.a.b	ENSGT00940000154486.b.a.a.b.e.a.a.a	ENSGT00390000016151	ENSGT00940000160532.h	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00990000205068	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a
Turquoise killifish	MODERN SPECIES	1623	ENSNFUG00015010607	CNTNAP5 (ENSNFUG00015010655)	ndufa10 (ENSNFUG00015011066)	ENSNFUG00015011134	ahr2 (ENSNFUG00015011148)	KALRN (ENSNFUG00015011459)	ENSNFUG00015015968	si:dkey-57a22.15 (ENSNFUG00015015975)	ENSNFUG00015015983	ENSNFUG00015015997	ENSNFUG00015016025	pknox1.1 (ENSNFUG00015016032)	ENSNFUG00015016043	CCDC93 (ENSNFUG00015016164) #21	si:dkey-251i10.3 (ENSNFUG00015016189)	insig2 (ENSNFUG00015016192) #22	ENSNFUG00015016196	idh1 (ENSNFUG00015016215)	DGKG (ENSNFUG00015016687)	ENSNFUG00015020391	ETV5A (ENSNFUG00015020396)	ITGB5 (ENSNFUG00015020515)	TNFAIP6 (ENSNFUG00015022242)	crygs1 (ENSNFUG00015022246)	TBCCD1 (ENSNFUG00015022248)	DNAJB11 (ENSNFUG00015022262)	satb2 (ENSNFUG00015022276)	ENSNFUG00015004775	rftn2 (ENSNFUG00015004796)	MOB4 (ENSNFUG00015004812)	hspe1 (ENSNFUG00015004832)
Mangrove rivulus	MODERN SPECIES	57	ENSKMAG00000002695	ENSKMAG00000002712	etv5a (ENSKMAG00000002729)	itgb5 (ENSKMAG00000002781)	rif1 (ENSKMAG00000002852)	tnfaip6 (ENSKMAG00000002891)	PDE9A (ENSKMAG00000002930)	wdr4 (ENSKMAG00000002952)	ENSKMAG00000002967	ENSKMAG00000003009	pknox1.1 (ENSKMAG00000003031)	TMPRSS3 (ENSKMAG00000003086)	ENSKMAG00000003096	ccdc93 (ENSKMAG00000003155) #21	si:dkey-251i10.3 (ENSKMAG00000003300)	insig2 (ENSKMAG00000003330) #22	EN1 (ENSKMAG00000003345) #23	MARCO (ENSKMAG00000003365) #24	C1QL2 (ENSKMAG00000003384) #25	zgc:101851 (ENSKMAG00000003406) #27	dbi (ENSKMAG00000003441) ##28	ENSKMAG00000003472	ENSKMAG00000003509	ENSKMAG00000003532	crygs1 (ENSKMAG00000003547)	tbccd1 (ENSKMAG00000003562)	dnajb11 (ENSKMAG00000003575)	satb2 (ENSKMAG00000003635)	PLCL1 (ENSKMAG00000003696)	rftn2 (ENSKMAG00000003710)	mob4 (ENSKMAG00000003726)
Cyprinodontoidei	ANCESTRAL SPECIES	35								ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00940000159245	ENSGT00390000011821	ENSGT00940000160532.h	ENSGT00390000016151	ENSGT00940000154486.b.a.a.b.e.a.a.a	ENSGT00940000154486.b.b.a.b	ENSGT00940000155248.wb	ENSGT00940000166969.a
Poeciliinae	ANCESTRAL SPECIES		ENSGT00940000154486.b.b.a.b	ENSGT00940000154486.b.a.a.b.e.a.a.a	ENSGT00390000016151	ENSGT00940000160532.h	ENSGT00390000011821	ENSGT00940000160639.b.b	ENSGT00390000013151.a.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00940000159245
Poecilia	ANCESTRAL SPECIES	27	ENSGT00940000154486.b.b.a.b	ENSGT00940000154486.b.a.a.b.e.a.a.a	ENSGT00390000016151	ENSGT00940000160532.h	ENSGT00390000011821	ENSGT00940000160639.b.b	ENSGT00390000013151.a.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00940000159245	ENSGT00940000159890	ENSGT00940000155212.ab.a	ENSGT00940000154319	ENSGT00940000156884	ENSGT00940000168817.l.b	ENSGT00940000158614	ENSGT00940000156634.b
NAME_6	ANCESTRAL SPECIES	150								ENSGT00390000013151.a.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT01090000259987.a.a.a.p	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00940000159245	ENSGT00940000159890	ENSGT00940000155212.ab.a	ENSGT00940000154319	ENSGT00940000156884	ENSGT00940000168817.l.b	ENSGT00940000158614	ENSGT00940000156634.b
Sailfin molly	MODERN SPECIES	2778																insig2 (ENSPLAG00000009661) #22	ENSPLAG00000009635 #23	ENSPLAG00000009616	zgc:101851 (ENSPLAG00000009580) #27
Amazon molly	MODERN SPECIES	624						ENSPFOG00000020799	sh3bp4 (ENSPFOG00000017293)	wdr4 (ENSPFOG00000017307)	ENSPFOG00000017342	ENSPFOG00000020800	pknox1.1 (ENSPFOG00000017346)	TMPRSS3 (ENSPFOG00000017381)	ENSPFOG00000017395	ccdc93 (ENSPFOG00000017408) #21	si:dkey-251i10.3 (ENSPFOG00000020801)	insig2 (ENSPFOG00000017470) #22	EN1 (ENSPFOG00000017491) #23	MARCO (ENSPFOG00000017496) #24	zgc:101851 (ENSPFOG00000017497) #27	dbi (ENSPFOG00000017503) ##28	ENSPFOG00000017506	UBXN4 (ENSPFOG00000017537)	ENSPFOG00000017574	slc37a1 (ENSPFOG00000017585)	vars2 (ENSPFOG00000017616)	SHROOM2 (ENSPFOG00000017733)	sumo1 (ENSPFOG00000017752)	MAP3K2 (ENSPFOG00000017768)	ENSPFOG00000023367	ENSPFOG00000017814	ephx2 (ENSPFOG00000017842)
Guppy	MODERN SPECIES	450	ahr2 (ENSPREG00000015765)	ndufa10 (ENSPREG00000015753)	CNTNAP5 (ENSPREG00000015713)	ENSPREG00000015673	arl4cb (ENSPREG00000015645)	sh3bp4 (ENSPREG00000015626)	wdr4 (ENSPREG00000015608)	ENSPREG00000015595	ENSPREG00000015587	ENSPREG00000015565	pknox1.1 (ENSPREG00000015499)	TMPRSS3 (ENSPREG00000015460)	ENSPREG00000015446	ccdc93 (ENSPREG00000015393) #21	si:dkey-251i10.3 (ENSPREG00000015374)	insig2 (ENSPREG00000015336) #22	EN1 (ENSPREG00000015326) #23	ENSPREG00000015312	zgc:101851 (ENSPREG00000015231) #27	dbi (ENSPREG00000015201) ##28	ENSPREG00000015180	UBXN4 (ENSPREG00000015157)	ENSPREG00000015140	slc37a1 (ENSPREG00000015062)	vars2 (ENSPREG00000014998)	ENSPREG00000014970	sumo1 (ENSPREG00000014944)	ENSPREG00000014932	ENSPREG00000014907	ephx2 (ENSPREG00000014863)	plaat1l (ENSPREG00000014846)
Platyfish	MODERN SPECIES	21	sh3bp4 (ENSXMAG00000009455)	WDR4 (ENSXMAG00000009462)	ENSXMAG00000025421	ENSXMAG00000023986	ENSXMAG00000025871	ENSXMAG00000021579	ENSXMAG00000020844	ENSXMAG00000028686	pknox1.1 (ENSXMAG00000028002)	TMPRSS3 (ENSXMAG00000021103)	ENSXMAG00000029588	ENSXMAG00000000081	ccdc93 (ENSXMAG00000024243) #21	si:dkey-251i10.3 (ENSXMAG00000020072)	ENSXMAG00000020952	insig2 (ENSXMAG00000002901) #22	EN1 (ENSXMAG00000005251) #23	MARCO (ENSXMAG00000022971) #24	zgc:101851 (ENSXMAG00000027497) #27	dbi (ENSXMAG00000022116) ##28	ENSXMAG00000005209	UBXN4 (ENSXMAG00000005191)	ENSXMAG00000006688	slc37a1 (ENSXMAG00000006652)
NAME_4	ANCESTRAL SPECIES	346										ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00940000178849
Sheepshead minnow	MODERN SPECIES	1043								ENSCVAG00000010205	wdr4 (ENSCVAG00000010215)	ENSCVAG00000010223	pknox1.1 (ENSCVAG00000010252)	TMPRSS3 (ENSCVAG00000010342)	ENSCVAG00000010362	ENSCVAG00000010373 #21	si:dkey-251i10.3 (ENSCVAG00000010387)	INSIG2 (ENSCVAG00000010409) #22	EN1 (ENSCVAG00000010420) #23	ENSCVAG00000010445
Oryzias	ANCESTRAL SPECIES	10	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000156332 #34	ENSGT00940000157211.l #33	ENSGT00390000010354 #32	ENSGT00390000011821	ENSGT00940000159245	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000157314.B	ENSGT00510000048978	ENSGT00940000158231.l	ENSGT00390000016499	ENSGT00730000111249	ENSGT00940000155868.f	ENSGT00390000001083
Oryzias_b	ANCESTRAL SPECIES	40	ENSGT00950000183214.a.b.a.b.f.a	ENSGT00940000155270.i.a	ENSGT00940000156332 #34	ENSGT00940000157211.l #33	ENSGT00390000010354 #32	ENSGT00390000011821	ENSGT00940000159245	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT01090000259987.a.a.a.o.a	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000175580	ENSGT00390000016499	ENSGT00730000111249	ENSGT00940000155868.f	ENSGT00390000001083	ENSGT00950000182808.a.a.a.a.a	ENSGT00940000165735
Javanese ricefish	MODERN SPECIES	13	ENSOJAG00000023800	epb41l5 (ENSOJAG00000023802) #34	ENSOJAG00000023812	tmem177 (ENSOJAG00000023817) #32	ENSOJAG00000023821	slc37a1 (ENSOJAG00000023831)	ENSOJAG00000023837	WDR4 (ENSOJAG00000023838)	ENSOJAG00000003518	ENSOJAG00000003543	pknox1.1 (ENSOJAG00000003551)	ENSOJAG00000003579	ENSOJAG00000003760	ccdc93 (ENSOJAG00000004030) #21	si:dkey-251i10.3 (ENSOJAG00000005827)	insig2 (ENSOJAG00000005876) #22	EN1 (ENSOJAG00000006071) #23	ENSOJAG00000006080	C1QL2 (ENSOJAG00000006091) #25	DBI (ENSOJAG00000006119) ##28	ENSOJAG00000006370	UBXN4 (ENSOJAG00000009102)	ENSOJAG00000009109	mmadhcb (ENSOJAG00000009116)	ENSOJAG00000009167	ENSOJAG00000009185	ENSOJAG00000009195	ENSOJAG00000009240	arglu1a (ENSOJAG00000009269)	efnb2a (ENSOJAG00000009284)	ENSOJAG00000009310
Indian medaka	MODERN SPECIES	18	nrp2b (ENSOMEG00000016727)	epb41l5 (ENSOMEG00000016756) #34	ENSOMEG00000016774 #33	ptpn4a (ENSOMEG00000016814) #33	tmem177 (ENSOMEG00000016831) #32	ENSOMEG00000016910	slc37a1 (ENSOMEG00000016960)	wdr4 (ENSOMEG00000016985)	ENSOMEG00000017009	ENSOMEG00000017019	pknox1.1 (ENSOMEG00000017074)	ENSOMEG00000017105	ENSOMEG00000017123	ccdc93 (ENSOMEG00000017201) #21	si:dkey-251i10.3 (ENSOMEG00000017220)	insig2 (ENSOMEG00000017239) #22	EN1 (ENSOMEG00000017248) #23	ENSOMEG00000017331 #24	C1QL2 (ENSOMEG00000017377) #25	zgc:101851 (ENSOMEG00000017437) #27	ITGB2 (ENSOMEG00000017567)	ENSOMEG00000017623	ENSOMEG00000017652	mmadhcb (ENSOMEG00000017695)	ENSOMEG00000017717	ENSOMEG00000017740	ENSOMEG00000017830	ENSOMEG00000017849	arglu1a (ENSOMEG00000017861)	efnb2a (ENSOMEG00000017892)	ENSOMEG00000017911
Oryzias_a	ANCESTRAL SPECIES																	ENSGT00580000081600.c.b #22
Chinese medaka	MODERN SPECIES	5062																insig2 (ENSOSIG00000003253) #22
Ovalentaria_B	ANCESTRAL SPECIES	52	ENSGT00940000158231.k	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000156402.A.b
Pomacentridae	ANCESTRAL SPECIES	130	ENSGT00940000158406	ENSGT00510000051617	ENSGT00940000155131	ENSGT00390000011821	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00940000175678	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00390000015050.`b.a
Pomacentridae_A	ANCESTRAL SPECIES	238														ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00390000015050.`b.a
Amphiprion	ANCESTRAL SPECIES	151														ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00940000182331	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00390000015050.`b.a	ENSGT00510000051617	ENSGT00940000155131	ENSGT00940000158406	ENSGT00390000016499	ENSGT00940000158231.l	ENSGT00510000048978	ENSGT00940000157314.B	ENSGT00940000158231.k
Clown anemonefish	MODERN SPECIES	569													ENSAOCG00000001674	ccdc93 (ENSAOCG00000002064) #21	si:dkey-251i10.3 (ENSAOCG00000023132)	INSIG2 (ENSAOCG00000023125) #22	EN1 (ENSAOCG00000023108) #23	ENSAOCG00000023101	MARCO (ENSAOCG00000023087) #24	C1QL2 (ENSAOCG00000001665) #25	zgc:101851 (ENSAOCG00000023046) #27	dbi (ENSAOCG00000023005) ##28	mmadhcb (ENSAOCG00000001944)	ENSAOCG00000022978	ENSAOCG00000022972	TMEM50B (ENSAOCG00000022965)	ENSAOCG00000022939	C21orf62 (ENSAOCG00000022920)	ENSAOCG00000022909	ENSAOCG00000022894	ENSAOCG00000022886
Orange clownfish	MODERN SPECIES	3	ENSAPEG00000024163	ENSAPEG00000024150	slc37a1 (ENSAPEG00000024132)	ENSAPEG00000024123	PDE9A (ENSAPEG00000024113)	wdr4 (ENSAPEG00000024095)	ENSAPEG00000024085	ENSAPEG00000024072	pknox1.1 (ENSAPEG00000024056)	ENSAPEG00000024045	TMPRSS3 (ENSAPEG00000024022)	CRYGS (ENSAPEG00000024003)	lcmt2 (ENSAPEG00000023989)	ccdc93 (ENSAPEG00000023969) #21	si:dkey-251i10.3 (ENSAPEG00000023935)	INSIG2 (ENSAPEG00000023918) #22	ENSAPEG00000023863	EN1 (ENSAPEG00000023852) #23	ENSAPEG00000023847	MARCO (ENSAPEG00000023833) #24	ENSAPEG00000023808	C1QL2 (ENSAPEG00000023788) #25	ENSAPEG00000023776	zgc:101851 (ENSAPEG00000023758) #27	DBI (ENSAPEG00000023741) ##28	mmadhcb (ENSAPEG00000023729)	ENSAPEG00000023720	TMEM50B (ENSAPEG00000023709)	ENSAPEG00000023684	C21orf62 (ENSAPEG00000023672)	ENSAPEG00000023665
Spiny chromis	MODERN SPECIES	1894														ENSAPOG00000011594 #21	si:dkey-251i10.3 (ENSAPOG00000011615)	insig2 (ENSAPOG00000011669) #22
Bicolor damselfish	MODERN SPECIES	395	rsph3 (ENSSPAG00000005341)	ENSSPAG00000005348	TMEM50B (ENSSPAG00000005356)	ENSSPAG00000005370	slc37a1 (ENSSPAG00000005389)	PDE9A (ENSSPAG00000005476)	wdr4 (ENSSPAG00000005499)	wdr4 (ENSSPAG00000005525)	ENSSPAG00000005546	ENSSPAG00000005561	pknox1.1 (ENSSPAG00000005572)	TMPRSS3 (ENSSPAG00000005596)	ENSSPAG00000005611	ccdc93 (ENSSPAG00000005621) #21	si:dkey-251i10.3 (ENSSPAG00000005656)	INSIG2 (ENSSPAG00000005664) #22	EN1 (ENSSPAG00000005691) #23	ENSSPAG00000005703	ENSSPAG00000005732
Cichlidae	ANCESTRAL SPECIES	82	ENSGT01090000259987.a.a.a.p	ENSGT00940000170936	ENSGT00940000172822	ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000156402.A.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	44					ENSGT00940000160205	ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000156402.A.b	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00530000068353	ENSGT00940000166969.a	ENSGT00940000155248.wb	ENSGT00940000154486.b.b.a.b	ENSGT00940000154486.b.a.a.b.e.a.a.a	ENSGT00390000016151
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	58						ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000163452.l	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000156402.A.b	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00530000068353	ENSGT00940000166969.a	ENSGT00940000155248.wb	ENSGT00940000154486.b.b.a.b	ENSGT00940000154486.b.a.a.b.e.a.a.a
Haplochromini	ANCESTRAL SPECIES	67						ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000163452.l	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000156402.A.b	ENSGT00940000159069	ENSGT00950000183019.f.b.b.c	ENSGT00940000157916	ENSGT00530000068353	ENSGT00940000166969.a.b	ENSGT00940000155248.wb	ENSGT00940000154486.b.b.a.b	ENSGT00940000154486.b.a.a.b.e.a.a.a
Burton s mouthbrooder	MODERN SPECIES	646						ENSHBUG00000020707	mmadhcb (ENSHBUG00000020746)	slc37a1 (ENSHBUG00000020906)	PDE9A (ENSHBUG00000020924)	wdr4 (ENSHBUG00000020935)	ENSHBUG00000020945	pknox1.1 (ENSHBUG00000020992)	TMPRSS3 (ENSHBUG00000021035)	ccdc93 (ENSHBUG00000021055) #21	si:dkey-251i10.3 (ENSHBUG00000000649)	insig2 (ENSHBUG00000021080) #22	ENSHBUG00000021114	EN1 (ENSHBUG00000021128) #23	zgc:101851 (ENSHBUG00000021150) #27	dbi (ENSHBUG00000021164) ##28	ENSHBUG00000021277
Haplochromini_A	ANCESTRAL SPECIES	87						ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b #22	ENSGT00940000163452.l	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000156402.A.b
Haplochromini_B	DUPLICATION
Haplochromini_B	ANCESTRAL SPECIES	76						ENSGT00530000063686.a.a	ENSGT00390000015050.`b.a	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00390000011294 #21	ENSGT00390000008142	ENSGT00580000081600.c.b.s #22	ENSGT00940000163452.l	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00940000156402.A.b	ENSGT01100000263532.C.c.a.a.a.e.a	ENSGT01100000263532.A.a.b.i	ENSGT01100000263532.A.a.a.a.b.a.b	ENSGT01100000263523.H.a	ENSGT01100000263523.J	ENSGT01100000263523.L.d.a	ENSGT01100000263523.F	ENSGT01100000263532.A.b.c.a
Zebra mbuna	MODERN SPECIES	159						ENSMZEG00005013771	mmadhcb (ENSMZEG00005013762)	slc37a1 (ENSMZEG00005013735)	PDE9A (ENSMZEG00005013723)	wdr4 (ENSMZEG00005013711)	ENSMZEG00005013702	pknox1.1 (ENSMZEG00005013691)	TMPRSS3 (ENSMZEG00005013673)	ccdc93 (ENSMZEG00005013648) #21	si:dkey-251i10.3 (ENSMZEG00005013633)	INSIG2 (ENSMZEG00005013631) #22
Eastern happy	MODERN SPECIES	7				ENSACLG00000005971	mmadhcb (ENSACLG00000005999)	slc37a1 (ENSACLG00000006031)	ENSACLG00000006117	PDE9A (ENSACLG00000006122)	wdr4 (ENSACLG00000006132)	ENSACLG00000006140	pknox1.1 (ENSACLG00000006161)	TMPRSS3 (ENSACLG00000006214)	ENSACLG00000006241	ccdc93 (ENSACLG00000006247) #21	si:dkey-251i10.3 (ENSACLG00000006291)	insig2 (ENSACLG00000006300) #22	ENSACLG00000006319	ENSACLG00000006530	ENSACLG00000006549	EN1 (ENSACLG00000006553) #23	ENSACLG00000006562 #24	C1QL2 (ENSACLG00000006596) #25	zgc:101851 (ENSACLG00000006622) #27	dbi (ENSACLG00000006631) ##28	ENSACLG00000006959	ENSACLG00000006980	ENSACLG00000006985	ENSACLG00000007013	ENSACLG00000007025	ENSACLG00000007061	ENSACLG00000007064
Haplochromini_B	ANCESTRAL SPECIES																	ENSGT00580000081600.c.b.t #22
Zebra mbuna	MODERN SPECIES	1098	hpxa (ENSMZEG00005018644)	ENSMZEG00005018642	ENSMZEG00005018639	fhip1b (ENSMZEG00005018635)	ENSMZEG00005018632	TRAPPC10 (ENSMZEG00005018624)	gdf3 (ENSMZEG00005018618)	klf7b (ENSMZEG00005018616)	ENSMZEG00005018612	ccnyl1 (ENSMZEG00005018605)	fzd5 (ENSMZEG00005018600)	PLEKHM3 (ENSMZEG00005018597)	ENSMZEG00005018593	ENSMZEG00005018591	UBXN4 (ENSMZEG00005018583)	INSIG2 (ENSMZEG00005018579) #22	ENSMZEG00005018574	EN1 (ENSMZEG00005018571) #23	ENSMZEG00005018567 #24	C1QL2 (ENSMZEG00005018563) #25	zgc:101851 (ENSMZEG00005018560) #27	dbi (ENSMZEG00005018559) ##28	ENSMZEG00005018549	ENSMZEG00005018546	ENSMZEG00005018541	ENSMZEG00005018539	ENSMZEG00005018525	ENSMZEG00005018517	ENSMZEG00005018498	ENSMZEG00005018488	ENSMZEG00005018484
P. nyererei	MODERN SPECIES	610						ENSPNYG00000022750	mmadhcb (ENSPNYG00000022755)	slc37a1 (ENSPNYG00000022762)	PDE9A (ENSPNYG00000022775)	wdr4 (ENSPNYG00000022779)	ENSPNYG00000022788	pknox1.1 (ENSPNYG00000022799)	TMPRSS3 (ENSPNYG00000022810)	ccdc93 (ENSPNYG00000022855) #21	si:dkey-251i10.3 (ENSPNYG00000022865)	insig2 (ENSPNYG00000022870) #22	ENSPNYG00000022877	EN1 (ENSPNYG00000022882) #23	ENSPNYG00000022892 #24	C1QL2 (ENSPNYG00000022899) #25	zgc:101851 (ENSPNYG00000022912) #27	dbi (ENSPNYG00000022922) ##28	ENSPNYG00000022932	ENSPNYG00000022940
Lyretail cichlid	MODERN SPECIES	451											ENSNBRG00000017201	ENSNBRG00000017182	PDE9A (ENSNBRG00000017173)	ccdc93 (ENSNBRG00000017130) #21	si:dkey-251i10.3 (ENSNBRG00000016950)	insig2 (ENSNBRG00000016869) #22	ENSNBRG00000016848	EN1 (ENSNBRG00000016827) #23	ENSNBRG00000016813	ENSNBRG00000016797	C1QL2 (ENSNBRG00000016751) #25	zgc:101851 (ENSNBRG00000016736) #27	dbi (ENSNBRG00000016720) ##28	ENSNBRG00000016679	ENSNBRG00000016663	ENSNBRG00000016645	ENSNBRG00000016573	ENSNBRG00000016540	ENSNBRG00000016465	ENSNBRG00000016452	ENSNBRG00000016444
Nile tilapia	MODERN SPECIES	7	ENSONIG00000039173	UBXN4 (ENSONIG00000017402)	nmi (ENSONIG00000017404)	mmadhcb (ENSONIG00000017407)	slc37a1 (ENSONIG00000017408)	PDE9A (ENSONIG00000017410)	ENSONIG00000029745	wdr4 (ENSONIG00000017415)	ENSONIG00000029755	ENSONIG00000040783	pknox1.1 (ENSONIG00000017418)	TMPRSS3 (ENSONIG00000017423)	ENSONIG00000038272	ccdc93 (ENSONIG00000017425) #21	si:dkey-251i10.3 (ENSONIG00000020563)	insig2 (ENSONIG00000017428) #22	ENSONIG00000035463	EN1 (ENSONIG00000017432) #23	ENSONIG00000036588	C1QL2 (ENSONIG00000017433) #25	zgc:101851 (ENSONIG00000029848) #27	ENSONIG00000033281	dbi (ENSONIG00000041367) ##28	ENSONIG00000017436	ENSONIG00000017437	ENSONIG00000037172	ENSONIG00000041761	ENSONIG00000032654	ENSONIG00000042080	ENSONIG00000029154	ENSONIG00000027357
Midas cichlid	MODERN SPECIES	1351		ENSACIG00000003509	ubxn4 (ENSACIG00000003578)	ENSACIG00000003587	ENSACIG00000003598	mmadhcb (ENSACIG00000003616)	slc37a1 (ENSACIG00000003635)	PDE9A (ENSACIG00000003713)	wdr4 (ENSACIG00000003750)	ENSACIG00000003774	ENSACIG00000003875	pknox1.1 (ENSACIG00000003887)	ENSACIG00000003912	ccdc93 (ENSACIG00000003942) #21	si:dkey-251i10.3 (ENSACIG00000004000)	insig2 (ENSACIG00000004028) #22
Protacanthopterygii	ANCESTRAL SPECIES	46	ENSGT00390000006051	ENSGT00940000154389.a	ENSGT00940000153518.d.b.a.a	ENSGT00950000183078.a	ENSGT00690000101915.i.a	ENSGT00940000161312	ENSGT00940000167237	ENSGT00940000156459.l	ENSGT01050000244948.c.a	ENSGT00940000157088	ENSGT00390000000367.v	ENSGT00390000000367.u	ENSGT00390000016088	ENSGT00950000183034.A.h	ENSGT00390000011294 #21	ENSGT00580000081600.c.b #22	ENSGT00940000160811.c.a #23	ENSGT00950000183074.C #24	ENSGT00940000156913.b.j.b #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b ##28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b	ENSGT00940000165604	ENSGT00730000111087	ENSGT00940000157028	ENSGT01050000244864.B.b.a.b	ENSGT01030000234513.B.b.c	ENSGT01030000234915	ENSGT00390000007182
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	184	ENSGT00940000161312.g	ENSGT00940000156459.l.a	ENSGT00940000154490.a.a.e.b	ENSGT00940000163149.a.a.a.b	ENSGT01050000244948.c.a.e	ENSGT00940000156459.k	ENSGT00940000154490.a.b	ENSGT00940000153665.b.a.a	ENSGT00940000156365	ENSGT00950000183034.A.g	ENSGT00940000157088.f.a	ENSGT00390000000367.v	ENSGT00390000016088.d	ENSGT00950000183034.A.h.c	ENSGT00390000011294.i.a #21	ENSGT00580000081600.c.b.u #22	ENSGT00940000160811.c.a.a #23	ENSGT00950000183074.C.e #24	ENSGT00940000156913.b.j.b.d #25	ENSGT00940000154846.a.b.e ##28	ENSGT00730000111087.d	ENSGT00940000157028.j	ENSGT01050000244864.B.b.a.b.c	ENSGT01030000234513.B.b.c.l	ENSGT00390000007182.g.a	ENSGT00940000161739	ENSGT00390000016366.f	ENSGT00940000153139.A.c	ENSGT00940000159161.c	ENSGT00940000164249.b.b.d	ENSGT00390000003152.c.b
Huchen	MODERN SPECIES	246											RAC3 (ENSHHUG00000049093)	ENSHHUG00000049260	zgc:152951 (ENSHHUG00000049262)	ENSHHUG00000049264	ccdc93 (ENSHHUG00000049266) #21	insig2 (ENSHHUG00000049373) #22	EN1 (ENSHHUG00000049404) #23	ENSHHUG00000049407	ENSHHUG00000049410 #24	ENSHHUG00000025990	C1QL2 (ENSHHUG00000025993) #25	dbi (ENSHHUG00000025999) ##28	mphosph8 (ENSHHUG00000026099)	ZMYM2 (ENSHHUG00000026118)	gja3 (ENSHHUG00000026126)	gjb8 (ENSHHUG00000026129)	cryl1 (ENSHHUG00000026136)	ENSHHUG00000026148	ENSHHUG00000026154	il17d (ENSHHUG00000026159)	eef1akmt1 (ENSHHUG00000026160)
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000153665.b.a.a	ENSGT00940000156365	ENSGT00950000183034.A.g	ENSGT00950000182832.B.l	ENSGT00950000182905.a.b.h.b	ENSGT00390000002204.b	ENSGT00940000163575	ENSGT00390000016051.a.f	ENSGT00390000006051.db.a	ENSGT00510000046929.a	ENSGT00940000157088.f.a	ENSGT00390000000367.v	ENSGT00390000016088.d	ENSGT00950000183034.A.h.c	ENSGT00390000011294.i.a #21	ENSGT00580000081600.c.b.u #22	ENSGT00940000160811.c.a.a #23	ENSGT00950000183074.C.e #24	ENSGT00940000156913.b.j.b.d #25	ENSGT00940000154846.a.b.e ##28	ENSGT01000000220848	ENSGT00730000111087.d	ENSGT00940000157028.j	ENSGT01050000244864.B.b.a.b.c	ENSGT01030000234513.B.b.c.l	ENSGT00390000007182.g.a	ENSGT00940000161739	ENSGT00390000016366.f	ENSGT00940000153139.A.c	ENSGT00940000159161.c	ENSGT00940000164249.b.b.d
Salmo	ANCESTRAL SPECIES	10	ENSGT00940000159552.g.a	ENSGT00390000006051.eb.b.a	ENSGT00940000154389.a.c.b.a.b	ENSGT00940000168128	ENSGT00690000101915.i.a.c	ENSGT00940000161312.g	ENSGT00940000156459.l.a	ENSGT00940000154490.a.a.e.b	ENSGT00940000163149.a.a.a.b	ENSGT01050000244948.c.a.e	ENSGT00940000157088.f.a	ENSGT00390000000367.v	ENSGT00390000016088.d	ENSGT00950000183034.A.h.c	ENSGT00390000011294.i.a #21	ENSGT00580000081600.c.b.u #22	ENSGT00940000160811.c.a.a #23	ENSGT00950000183074.C.e #24	ENSGT00940000156913.b.j.b.d #25	ENSGT00940000154846.a.b.e.a ##28	ENSGT01000000220848	ENSGT00730000111087.d	ENSGT00940000165604.q	ENSGT00940000157028.j	ENSGT01050000244864.B.b.a.b.c	ENSGT01030000234513.B.b.c.l	ENSGT00390000007182.g.a	ENSGT00390000015473.h	ENSGT00940000161739	ENSGT00390000016366.f	ENSGT00940000153139.A.c
River trout	MODERN SPECIES	12	ENSSTUG00000011922	ENSSTUG00000012525	ENSSTUG00000012539	SLC5A7 (ENSSTUG00000012543)	CLDN14 (ENSSTUG00000012559)	arl6 (ENSSTUG00000012583)	ENSSTUG00000012692	ENSSTUG00000013050	ENSSTUG00000013055	STX19 (ENSSTUG00000013072)	EPHA3 (ENSSTUG00000013099)	ENSSTUG00000013391	ENSSTUG00000013417	ZNF654 (ENSSTUG00000013437)	CCDC93 (ENSSTUG00000013549) #21	insig2 (ENSSTUG00000016513) #22	EN1 (ENSSTUG00000016750) #23	MARCO (ENSSTUG00000016758) #24	C1QL2 (ENSSTUG00000016780) #25	dbi (ENSSTUG00000016785) ##28	ENSSTUG00000016814	ZMYM2 (ENSSTUG00000016823)	gja3 (ENSSTUG00000016908)	gjb8 (ENSSTUG00000016914)	cryl1 (ENSSTUG00000016921)	il17d (ENSSTUG00000001974)	eef1akmt1 (ENSSTUG00000001988)	xpo4 (ENSSTUG00000002202)	lats2 (ENSSTUG00000002579)	ENSSTUG00000002682	ENSSTUG00000002715
Atlantic salmon	MODERN SPECIES	13	ENSSSAG00000048090	GCC2 (ENSSSAG00000083267)	ENSSSAG00000055214	cld14 (ENSSSAG00000101081)	ENSSSAG00000067336	ENSSSAG00000055286	ENSSSAG00000066144	ENSSSAG00000104581	ENSSSAG00000066126	EPHA3 (ENSSSAG00000066073)	ENSSSAG00000093250	ENSSSAG00000086456	ENSSSAG00000065766	ZNF654 (ENSSSAG00000065719)	CCDC93 (ENSSSAG00000063646) #21	INSIG2 (ENSSSAG00000063089) #22	EN1 (ENSSSAG00000100497) #23	MARCO (ENSSSAG00000063051) #24	C1QL2 (ENSSSAG00000063036) #25	DBI (ENSSSAG00000062981) ##28	ENSSSAG00000062967	mphosph8 (ENSSSAG00000062944)	ENSSSAG00000082466	ZMYM2 (ENSSSAG00000062918)	gja3 (ENSSSAG00000120117)	ENSSSAG00000062907	gjb8 (ENSSSAG00000118009)	cryl1 (ENSSSAG00000062893)	ift88 (ENSSSAG00000062810)	il17d (ENSSSAG00000062781)	eef1akmt1 (ENSSSAG00000062771)
Oncorhynchus	ANCESTRAL SPECIES	13	ENSGT00940000154389.a.c.b.a.a.c	ENSGT00940000153518.d.b.b.w.a	ENSGT00950000183078.a.e	ENSGT00690000101915.i.a.c	ENSGT00940000161312.g	ENSGT00940000156459.l.a	ENSGT00940000154490.a.a.e.b	ENSGT00940000163149.a.a.a.b	ENSGT01050000244948.c.a.e	ENSGT00940000156365.e	ENSGT00940000157088.f.a	ENSGT00390000000367.v	ENSGT00390000016088.d	ENSGT00950000183034.A.h.c	ENSGT00390000011294.i.a #21	ENSGT00580000081600.c.b.u #22	ENSGT00940000160811.c.a.a #23	ENSGT00950000183074.C.e #24	ENSGT00940000156913.b.j.b.d #25	ENSGT00940000154846.a.b.e ##28	ENSGT01000000220848	ENSGT00730000111087.d	ENSGT00940000157028.j	ENSGT01050000244864.B.b.a.b.c	ENSGT01030000234513.B.b.c.l	ENSGT00390000007182.g.a	ENSGT00940000161739	ENSGT00940000153139.A.c	ENSGT00940000159161.c	ENSGT00940000164249.b.b.d	ENSGT00940000156523.a.d
Rainbow trout	MODERN SPECIES	14	ENSOMYG00000030655	ENSOMYG00000058342	GCC2 (ENSOMYG00000030401)	ENSOMYG00000011177	ENSOMYG00000051858	ENSOMYG00000030337	ENSOMYG00000029976	ENSOMYG00000029563	ENSOMYG00000029559	ENSOMYG00000056749	EPHA3 (ENSOMYG00000029003)	ENSOMYG00000069486	ENSOMYG00000028847	ZNF654 (ENSOMYG00000028716)	CCDC93 (ENSOMYG00000027858) #21	INSIG2 (ENSOMYG00000027381) #22	ENSOMYG00000067050	EN1 (ENSOMYG00000063069) #23	MARCO (ENSOMYG00000027257) #24	C1QL2 (ENSOMYG00000063328) #25	ENSOMYG00000049507	acbp (ENSOMYG00000027181) ##28	ENSOMYG00000068737	mphosph8 (ENSOMYG00000027117)	ZMYM2 (ENSOMYG00000027046)	gja3 (ENSOMYG00000027025)	gjb8 (ENSOMYG00000027004)	ENSOMYG00000054820	il17d (ENSOMYG00000026987)	xpo4 (ENSOMYG00000026814)	lats2 (ENSOMYG00000026701)
Oncorhynchus_a	ANCESTRAL SPECIES	11	ENSGT00940000172715	ENSGT00940000153518.d.b.b.w.a	ENSGT00950000183078.a.e	ENSGT00690000101915.i.a.c	ENSGT00940000161312.g	ENSGT00940000156459.l.a	ENSGT00940000154490.a.a.e.b	ENSGT00940000163149.a.a.a.b	ENSGT01050000244948.c.a.e	ENSGT00940000156365.e	ENSGT00940000157088.f.a	ENSGT00390000000367.v	ENSGT00390000016088.d	ENSGT00950000183034.A.h.c	ENSGT00390000011294.i.a #21	ENSGT00580000081600.c.b.u #22	ENSGT00940000160811.c.a.a #23	ENSGT00950000183074.C.e #24	ENSGT00940000156913.b.j.b.d #25	ENSGT01010000230235	ENSGT00940000154846.a.b.e ##28	ENSGT01000000220848	ENSGT00940000157028.j	ENSGT01050000244864.B.b.a.b.c	ENSGT01030000234513.B.b.c.l	ENSGT00390000007182.g.a	ENSGT00940000161739	ENSGT00940000153139.A.c	ENSGT00940000159161.c	ENSGT00940000164249.b.b.d	ENSGT00940000156523.a.d
Chinook salmon	MODERN SPECIES	18	AKAP11 (ENSOTSG00005010381)	ENSOTSG00005010380	VGLL3 (ENSOTSG00005010379)	chmp2ba (ENSOTSG00005010378)	pou1f1 (ENSOTSG00005010377)	HTR1F (ENSOTSG00005010376)	edar (ENSOTSG00005010337)	ENSOTSG00005010335	STX19 (ENSOTSG00005010334)	ENSOTSG00005010333	EPHA3 (ENSOTSG00005010264)	C3orf38 (ENSOTSG00005010261)	zgc:152951 (ENSOTSG00005010260)	ENSOTSG00005010258	ccdc93 (ENSOTSG00005007165) #21	insig2 (ENSOTSG00005006866) #22	EN1 (ENSOTSG00005006861) #23	MARCO (ENSOTSG00005006859) #24	C1QL2 (ENSOTSG00005006858) #25	ENSOTSG00005006857	DBI (ENSOTSG00005006855) ##28	ENSOTSG00005006854	ZMYM2 (ENSOTSG00005006853)	gja3 (ENSOTSG00005006852)	gjb8 (ENSOTSG00005006850)	cryl1 (ENSOTSG00005006849)	il17d (ENSOTSG00005006848)	xpo4 (ENSOTSG00005006846)	lats2 (ENSOTSG00005006843)	ENSOTSG00005006842	ENSOTSG00005006841
Coho salmon	MODERN SPECIES	18	SLC5A7 (ENSOKIG00005025098)	CLDN14 (ENSOKIG00005025078)	arl6 (ENSOKIG00005025053)	ENSOKIG00005025036	ENSOKIG00005024606	ENSOKIG00005024559	STX19 (ENSOKIG00005022390)	ENSOKIG00005022373	ENSOKIG00005022364	ENSOKIG00005022352	ENSOKIG00005022346	EPHA3 (ENSOKIG00005020532)	C3orf38 (ENSOKIG00005020444)	ZNF654 (ENSOKIG00005020381)	ccdc93 (ENSOKIG00005019801) #21	INSIG2 (ENSOKIG00005019607) #22	EN1 (ENSOKIG00005019592) #23	MARCO (ENSOKIG00005019499) #24	C1QL2 (ENSOKIG00005019490) #25	ENSOKIG00005019474	ENSOKIG00005019455 ##28	ZMYM2 (ENSOKIG00005019398)	ENSOKIG00005019334	il17d (ENSOKIG00005019303)	xpo4 (ENSOKIG00005019093)	lats2 (ENSOKIG00005019032)	ENSOKIG00005018989	ENSOKIG00005018980	cox17 (ENSOKIG00005018963)	popdc2 (ENSOKIG00005018958)	pla1a (ENSOKIG00005018898)
Salmoninae	ANCESTRAL SPECIES	16	ENSGT00950000183078.a.f	ENSGT00940000178379.A.f	ENSGT00690000101915.i.a.d	ENSGT00940000161312.h	ENSGT00940000167237	ENSGT00940000156459.l.b	ENSGT00940000154490.a.a.e.a	ENSGT00950000182929.B.a.b.a	ENSGT01050000244948.c.a.f	ENSGT00940000157088.f.b	ENSGT00390000000367.u	ENSGT00390000016088.c	ENSGT00950000183034.A.h.d	ENSGT00390000011294.j #21	ENSGT00390000011294.i.b #21	ENSGT00580000081600.c.b.v #22	ENSGT00940000160811.c.a.b #23	ENSGT00950000183074.C.f #24	ENSGT00940000156913.b.j.b.c #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b.f ##28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b	ENSGT00940000165604	ENSGT00940000157028.i	ENSGT01050000244864.B.b.a.b.d	ENSGT01030000234513.B.b.c.k	ENSGT01030000234915	ENSGT00390000007182.g.b	ENSGT00390000015473
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000153518.d.b.a.a	ENSGT00950000183078.a.f	ENSGT00690000101915.i.a.d	ENSGT00940000161312.h	ENSGT00940000167237	ENSGT00940000156459.l.b	ENSGT00940000154490.a.a.e.a	ENSGT00950000182929.B.a.b.a	ENSGT01050000244948.c.a.f	ENSGT00940000157088.f.b	ENSGT00390000000367.u	ENSGT00390000016088.c	ENSGT00950000183034.A.h.d	ENSGT00390000011294.j #21	ENSGT00390000011294.i.b #21	ENSGT00580000081600.c.b.v #22	ENSGT00940000160811.c.a.b #23	ENSGT00950000183074.C.f #24	ENSGT00940000156913.b.j.b.c #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b.f ##28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b	ENSGT00940000165604	ENSGT00940000157028.i	ENSGT01050000244864.B.b.a.b.d	ENSGT01030000234513.B.b.c.k	ENSGT01030000234915	ENSGT00390000007182.g.b	ENSGT00390000015473
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00940000153518.d.b.a.a	ENSGT00950000183078.a.f	ENSGT00690000101915.i.a.d	ENSGT00940000161312.h	ENSGT00940000167237	ENSGT00940000156459.l.b	ENSGT00940000154490.a.a.e.a	ENSGT00950000182929.B.a.b.a	ENSGT01050000244948.c.a.f	ENSGT00940000157088.f.b	ENSGT00940000178379.A.f	ENSGT00390000000367.u	ENSGT00390000016088.c	ENSGT00950000183034.A.h.d	ENSGT00390000011294.i.b #21	ENSGT00580000081600.c.b.v #22	ENSGT00940000160811.c.a.b #23	ENSGT00950000183074.C.f #24	ENSGT00940000156913.b.j.b.c #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b.f ##28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b	ENSGT00730000111087.c.a	ENSGT00940000157028.i	ENSGT01050000244864.B.b.a.b.d	ENSGT01030000234513.B.b.c.k	ENSGT01030000234915	ENSGT00390000007182.g.b	ENSGT00390000015473
Rainbow trout	MODERN SPECIES	21	ENSOMYG00000054448	ENSOMYG00000011186	ENSOMYG00000055940	ENSOMYG00000011195	ENSOMYG00000011206	ENSOMYG00000011253	ENSOMYG00000011235	ENSOMYG00000068361	ENSOMYG00000011276	EPHA3 (ENSOMYG00000062925)	ENSOMYG00000011293	ENSOMYG00000011372	ENSOMYG00000011319	ZNF654 (ENSOMYG00000011376)	CCDC93 (ENSOMYG00000011463) #21	INSIG2 (ENSOMYG00000012001) #22	EN1 (ENSOMYG00000012048) #23	MARCO (ENSOMYG00000012054) #24	ENSOMYG00000073771	C1QL2 (ENSOMYG00000012059) #25	STEAP3 (ENSOMYG00000012066) #26	zgc:101851 (ENSOMYG00000012071) #27	dbi (ENSOMYG00000012076) ##28	tmem37 (ENSOMYG00000066203) #29	ENSOMYG00000012114	mphosph8 (ENSOMYG00000012268)	ENSOMYG00000051665	ZMYM2 (ENSOMYG00000012321)	gja3 (ENSOMYG00000012364)	gjb8 (ENSOMYG00000012366)	cryl1 (ENSOMYG00000012376)
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00950000183078.a.f	ENSGT00690000101915.i.a.d	ENSGT00940000161312.h	ENSGT00940000167237	ENSGT00940000156459.l.b	ENSGT00940000154490.a.a.e.a	ENSGT00950000182929.B.a.b.a	ENSGT01050000244948.c.a.f	ENSGT00940000157088.f.b	ENSGT00940000178379.A.f	ENSGT00390000000367.u	ENSGT00390000016088.c	ENSGT00950000183034.A.h.d	ENSGT00390000011294.j #21	ENSGT00390000011294.i.b #21	ENSGT00580000081600.c.b.v #22	ENSGT00940000160811.c.a.b #23	ENSGT00950000183074.C.f #24	ENSGT00940000156913.b.j.b.c #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b.f ##28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b	ENSGT00730000111087.c.a	ENSGT00940000157028.i	ENSGT01050000244864.B.b.a.b.d	ENSGT01030000234513.B.b.c.k	ENSGT01030000234915	ENSGT00390000007182.g.b	ENSGT00390000015473
Coho salmon	MODERN SPECIES	11	ENSOKIG00005000307	ENSOKIG00005000373	SLC5A7 (ENSOKIG00005000435)	CLDN14 (ENSOKIG00005000448)	ENSOKIG00005000455	ARL6 (ENSOKIG00005000460)	ENSOKIG00005000581	ENSOKIG00005000799	STX19 (ENSOKIG00005000809)	EPHA3 (ENSOKIG00005000835)	ENSOKIG00005000890	C3orf38 (ENSOKIG00005000894)	zgc:152951 (ENSOKIG00005000903)	ZNF654 (ENSOKIG00005000913)	CCDC93 (ENSOKIG00005000956) #21	insig2 (ENSOKIG00005001032) #22	ENSOKIG00005001049	EN1 (ENSOKIG00005001057) #23	MARCO (ENSOKIG00005001066) #24	C1QL2 (ENSOKIG00005001083) #25	STEAP3 (ENSOKIG00005001087) #26	zgc:101851 (ENSOKIG00005001096) #27	dbi (ENSOKIG00005001106) ##28	tmem37 (ENSOKIG00005001112) #29	ENSOKIG00005001117	ENSOKIG00005001125	mphosph8 (ENSOKIG00005001134)	ZMYM2 (ENSOKIG00005001160)	gja3 (ENSOKIG00005001177)	gjb8 (ENSOKIG00005001180)	cryl1 (ENSOKIG00005001186)
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	2990										ENSOTSG00005045725	C3orf38 (ENSOTSG00005045726)	zgc:152951 (ENSOTSG00005045727)	ENSOTSG00005045731	ENSOTSG00005045733 #21	ENSOTSG00005045734 #21	insig2 (ENSOTSG00005045738) #22	EN1 (ENSOTSG00005045779) #23	MARCO (ENSOTSG00005045781) #24
Chinook salmon	MODERN SPECIES	22	ENSOTSG00005011201	arl6 (ENSOTSG00005011202)	EPHA6 (ENSOTSG00005011203)	ENSOTSG00005011204	ENSOTSG00005011206	ENSOTSG00005011207	ENSOTSG00005011208	STX19 (ENSOTSG00005011209)	EPHA3 (ENSOTSG00005011210)	ENSOTSG00005011213	C3orf38 (ENSOTSG00005011215)	zgc:152951 (ENSOTSG00005011217)	ZNF654 (ENSOTSG00005011220)	ENSOTSG00005011222 #21	ENSOTSG00005011224	insig2 (ENSOTSG00005011225) #22	EN1 (ENSOTSG00005011294) #23	MARCO (ENSOTSG00005011295) #24	STEAP3 (ENSOTSG00005011300) #26	C1QL2 (ENSOTSG00005011301) #25	zgc:101851 (ENSOTSG00005011304) #27	dbi (ENSOTSG00005011315) ##28	tmem37 (ENSOTSG00005011316) #29	ENSOTSG00005011319	mphosph8 (ENSOTSG00005011322)	ZMYM2 (ENSOTSG00005011328)	gja3 (ENSOTSG00005011333)	gjb8 (ENSOTSG00005011335)	ENSOTSG00005011336	cryl1 (ENSOTSG00005011339)	ift88 (ENSOTSG00005011350)
Salmo	ANCESTRAL SPECIES	15	ENSGT00940000153518.d.b.a.a	ENSGT00950000183078.a.f	ENSGT00940000178379.A.f	ENSGT00690000101915.i.a.d	ENSGT00940000161312.h	ENSGT00940000167237	ENSGT00940000156459.l.b	ENSGT00950000182929.B.a.b.a	ENSGT00940000154490.a.a.e.a	ENSGT01050000244948.c.a.f	ENSGT00940000157088.f.b	ENSGT00390000000367.u	ENSGT00390000016088.c	ENSGT00950000183034.A.h.d	ENSGT00390000011294.i.b #21	ENSGT00580000081600.c.b.v #22	ENSGT00940000160811.c.a.b #23	ENSGT00950000183074.C.f #24	ENSGT00940000156913.b.j.b.c #25	ENSGT00390000008042.A.b.c #26	ENSGT00390000015352 #27	ENSGT00940000154846.a.b.e.b ##28	ENSGT00390000006225 #29	ENSGT00940000156402.A.b	ENSGT00940000165604.p	ENSGT00940000157028.i	ENSGT01050000244864.B.b.a.b.d	ENSGT01030000234513.B.b.c.k	ENSGT01030000234915	ENSGT00390000007182.g.b	ENSGT00390000015473.g
River trout	MODERN SPECIES	16	ENSSTUG00000038177	ENSSTUG00000038197	SLC5A7 (ENSSTUG00000038200)	CLDN14 (ENSSTUG00000038214)	ENSSTUG00000038232	arl6 (ENSSTUG00000038278)	ENSSTUG00000038332	ENSSTUG00000038624	STX19 (ENSSTUG00000038629)	ENSSTUG00000038643	EPHA3 (ENSSTUG00000038658)	C3orf38 (ENSSTUG00000038937)	zgc:152951 (ENSSTUG00000038951)	ENSSTUG00000038991	ENSSTUG00000039003 #21	insig2 (ENSSTUG00000039014) #22	EN1 (ENSSTUG00000039083) #23	ENSSTUG00000039088 #24	C1QL2 (ENSSTUG00000039114) #25	STEAP3 (ENSSTUG00000039118) #26	zgc:101851 (ENSSTUG00000039132) #27	dbi (ENSSTUG00000039152) ##28	tmem37 (ENSSTUG00000039176) #29	ENSSTUG00000039193	ENSSTUG00000039401	ZMYM2 (ENSSTUG00000039500)	gja3 (ENSSTUG00000039699)	gjb8 (ENSSTUG00000039705)	ENSSTUG00000039712	cryl1 (ENSSTUG00000039722)	ift88 (ENSSTUG00000039780)
Atlantic salmon	MODERN SPECIES	17	ENSSSAG00000067415	GCC2 (ENSSSAG00000055174)	ENSSSAG00000055210	ENSSSAG00000107993	ENSSSAG00000055229	ENSSSAG00000055233	ENSSSAG00000118247	ENSSSAG00000066220	ENSSSAG00000055892	ENSSSAG00000055904	EPHA3 (ENSSSAG00000055988)	cssa25h3orf38 (ENSSSAG00000059562)	zgc:152951 (ENSSSAG00000059573)	ENSSSAG00000059589	CCDC93 (ENSSSAG00000059607) #21	insig2 (ENSSSAG00000059671) #22	EN1 (ENSSSAG00000083028) #23	C1QL2 (ENSSSAG00000059760) #25	STEAP3 (ENSSSAG00000090173) #26	dbi (ENSSSAG00000059830) ##28	tmem37 (ENSSSAG00000086467) #29	ENSSSAG00000059873	ENSSSAG00000060025	ZMYM2 (ENSSSAG00000060150)	gja3 (ENSSSAG00000108381)	gjb8 (ENSSSAG00000060293)	ENSSSAG00000121720	cryl1 (ENSSSAG00000060337)	ift88 (ENSSSAG00000060757)	ENSSSAG00000117755	XPO4 (ENSSSAG00000093321)
Huchen	MODERN SPECIES	1783									ENSHHUG00000002851	ENSHHUG00000002870	C3orf38 (ENSHHUG00000002873)	zgc:152951 (ENSHHUG00000002882)	ENSHHUG00000002928	ENSHHUG00000002932	ENSHHUG00000002938	insig2 (ENSHHUG00000002943) #22	EN1 (ENSHHUG00000003020) #23	MARCO (ENSHHUG00000003027) #24	C1QL2 (ENSHHUG00000003043) #25	STEAP3 (ENSHHUG00000003045) #26	zgc:101851 (ENSHHUG00000003056) #27	dbi (ENSHHUG00000003109) ##28	ENSHHUG00000003191
Northern pike	MODERN SPECIES	15	SLC5A7 (ENSELUG00000001368)	CLDN14 (ENSELUG00000007635)	ENSELUG00000007622	arl6 (ENSELUG00000000269)	EPHA6 (ENSELUG00000007494)	ENSELUG00000026514	ENSELUG00000029463	ENSELUG00000007453	ATP1A1 (ENSELUG00000007421)	STX19 (ENSELUG00000007366)	EPHA3 (ENSELUG00000007311)	C3orf38 (ENSELUG00000007204)	zgc:152951 (ENSELUG00000007179)	ZNF654 (ENSELUG00000007144)	ccdc93 (ENSELUG00000000250) #21	insig2 (ENSELUG00000007007) #22	EN1 (ENSELUG00000006984) #23	MARCO (ENSELUG00000006951) #24	C1QL2 (ENSELUG00000006914) #25	zgc:101851 (ENSELUG00000006895) #27	dbi (ENSELUG00000006876) ##28	tmem37 (ENSELUG00000025136) #29	ENSELUG00000006846	ENSELUG00000025890	ENSELUG00000029560	ENSELUG00000006810	ZMYM2 (ENSELUG00000006752)	gja3 (ENSELUG00000034173)	ENSELUG00000006615	cryl1 (ENSELUG00000001582)	ift88 (ENSELUG00000006549)
Spotted gar	MODERN SPECIES	650	snx4 (ENSLOCG00000002790)	ENSLOCG00000002813	OSBPL11 (ENSLOCG00000002826)	gpd1c (ENSLOCG00000002845)	LMLN (ENSLOCG00000002877)	NCKAP5 (ENSLOCG00000002895) #10	LYPD1 (ENSLOCG00000002923) #12	gpr39 (ENSLOCG00000002937) #14	SLC35F5 (ENSLOCG00000002955) #15	actr3 (ENSLOCG00000002976) #16	ENSLOCG00000002992 ##17	ENSLOCG00000003049 ##17	ddx18 (ENSLOCG00000003108) #20	ENSLOCG00000003129	ccdc93 (ENSLOCG00000003144) #21	insig2 (ENSLOCG00000003172) #22	en1b (ENSLOCG00000003193) #23	ENSLOCG00000003213 #24	C1QL2 (ENSLOCG00000003228) #25	STEAP3 (ENSLOCG00000003240) #26	zgc:101851 (ENSLOCG00000003255) #27	dbi (ENSLOCG00000003268) #28	tmem37 (ENSLOCG00000003281) #29	SCTR (ENSLOCG00000003294) #30	CFAP221 (ENSLOCG00000003308) #31	esyt3 (ENSLOCG00000003337)	ENSLOCG00000003377	faimb (ENSLOCG00000003397)	ENSLOCG00000003405	parp14rs1 (ENSLOCG00000003430)	ENSLOCG00000003463
Reedfish	MODERN SPECIES	16	OSBPL11 (ENSECRG00000008894)	gpd1c (ENSECRG00000008861)	LMLN (ENSECRG00000008805)	ENSECRG00000008763 #10	LYPD1 (ENSECRG00000008751) #12	ENSECRG00000008745	gpr39 (ENSECRG00000008737) #14	SLC35F5 (ENSECRG00000008709) #15	actr3 (ENSECRG00000008686) #16	ENSECRG00000008672	ENSECRG00000008627 ##17	ENSECRG00000008596	ENSECRG00000008437 ##17	ddx18 (ENSECRG00000008365) #20	ccdc93 (ENSECRG00000008345) #21	insig2 (ENSECRG00000008313) #22	en1b (ENSECRG00000008287) #23	ENSECRG00000008264	C1QL2 (ENSECRG00000008247) #25	ENSECRG00000008238	STEAP3 (ENSECRG00000008230) #26	zgc:101851 (ENSECRG00000008209) #27	dbi (ENSECRG00000008196) #28	VPS13D (ENSECRG00000008075)	dhrs3a (ENSECRG00000008033)	aadacl4 (ENSECRG00000008026)	KLHDC7A (ENSECRG00000008017)	CFAP107 (ENSECRG00000008001)	igsf21a (ENSECRG00000007975)	ENSECRG00000007953	ARHGEF10L (ENSECRG00000007872)
Elephant shark	MODERN SPECIES	1530	ENSCMIG00000008294	ccnt2a (ENSCMIG00000008284)	acmsd (ENSCMIG00000008270)	tmem163a (ENSCMIG00000008264) #7	mgat5 (ENSCMIG00000008251) #8	ENSCMIG00000008243 #10	LYPD1 (ENSCMIG00000008240) #12	gpr39 (ENSCMIG00000008236) #14	SLC35F5 (ENSCMIG00000008172) #15	actr3 (ENSCMIG00000007938) #16	ENSCMIG00000007872	DPP10 (ENSCMIG00000007762) #17	ddx18 (ENSCMIG00000007666) #20	ENSCMIG00000007657	ccdc93 (ENSCMIG00000007585) #21	insig2 (ENSCMIG00000007551) #22	en1b (ENSCMIG00000007547) #23	marco (ENSCMIG00000007543)	C1QL2 (ENSCMIG00000007538) #25	STEAP3 (ENSCMIG00000007534) #26	zgc:101851 (ENSCMIG00000007532) #27	DBI (ENSCMIG00000007526) #28	ENSCMIG00000007522	tmem37 (ENSCMIG00000007517) #29	ENSCMIG00000007492 #30