Chordata	ANCESTRAL SPECIES																	ENSGT00530000063497 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00530000063497 #22
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES		ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.b ##15	ENSGT00940000154495.b.b	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00530000063497.b #22	ENSGT00940000167622	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00940000163785.b	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891 #35
Euteleostomi	ANCESTRAL SPECIES	14	ENSGT01060000248660	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000167622	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000165852	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00940000163785.b	ENSGT00390000007688 #34	ENSGT00530000064273.a.b
Sarcopterygii	ANCESTRAL SPECIES	17	ENSGT01060000248660	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000167622	ENSGT00940000162727	ENSGT00940000163466	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000165852	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00940000163785.b
Tetrapoda	ANCESTRAL SPECIES	8	ENSGT01060000248660	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891 #35	ENSGT00390000003298 #36	ENSGT01100000263525.a.b.b #37
Amniota	ANCESTRAL SPECIES	9	ENSGT01060000248660	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Mammalia	ANCESTRAL SPECIES	5	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Theria	ANCESTRAL SPECIES	3	ENSGT00940000160703	ENSGT00940000154265	ENSGT00940000162684	ENSGT00940000156840 #8	ENSGT00940000162297	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Eutheria	ANCESTRAL SPECIES		ENSGT00940000160703	ENSGT00940000154265	ENSGT00940000162297	ENSGT00940000156840 #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000154265	ENSGT00940000162297	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000162297	ENSGT00940000156840.b #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Glires	ANCESTRAL SPECIES		ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Rodentia	ANCESTRAL SPECIES		ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000163522.A #9	ENSGT00940000156840.b #8	ENSGT00940000162297	ENSGT00940000156840.a.b ##8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00940000154265	ENSGT00940000162684	ENSGT00940000163522.A.h ##9	ENSGT00940000162297	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Muroidea	ANCESTRAL SPECIES	6	ENSGT00940000163522.A.h ##9	ENSGT00940000163522.B ##9	ENSGT00940000156840.a.b ##8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.g.a ##18	ENSGT00940000157555.h #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00940000156840.b.x #8	ENSGT00940000163522.A.g.a #9	ENSGT00940000156840.b.w #7	ENSGT00940000156840.a.b ##8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.h #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Murinae	ANCESTRAL SPECIES	5	ENSGT00940000163522.A.g.a #9	ENSGT00940000156840.b.w #7	ENSGT00940000156840.a.b ##8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.h.a #17	ENSGT00940000157555.h.b #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Rat	MODERN SPECIES	11	Gbp3 (ENSRNOG00000036885) #7	Gbp1-ps1 (ENSRNOG00000023943) #8	Gbp6-ps2 (ENSRNOG00000070399) #9	Kyat3 (ENSRNOG00000043426) #10	Gtf2b (ENSRNOG00000011135) #11	Pkn2 (ENSRNOG00000011317) #12	Lmo4 (ENSRNOG00000009205) #13	Hs2st1 (ENSRNOG00000012549) #14	Selenof (ENSRNOG00000055257) #15	Sh3glb1 (ENSRNOG00000012957) #16	Clca5 (ENSRNOG00000013334) #17	Clca4l (ENSRNOG00000036877) #18	Clca4 (ENSRNOG00000029889) #19	Clca1 (ENSRNOG00000060831) #20	Clca2 (ENSRNOG00000013771) #21	Odf2l (ENSRNOG00000014059) #22	Col24a1 (ENSRNOG00000014143) #23	Znhit6 (ENSRNOG00000030049) #24	Ccn1 (ENSRNOG00000014350) #25	Ddah1 (ENSRNOG00000014613) #26	Bcl10 (ENSRNOG00000042389) #27	C2h1orf52 (ENSRNOG00000014857) #28	Syde2 (ENSRNOG00000026186) #29	Dnai3 (ENSRNOG00000014893) #30	Mcoln3 (ENSRNOG00000015024) #31	Mcoln2 (ENSRNOG00000015089) #32	Lpar3 (ENSRNOG00000064204) #33	Ssx2ip (ENSRNOG00000015425) #34	Ctbs (ENSRNOG00000015573) #35	Spata1 (ENSRNOG00000015678) #36	ENSRNOG00000068715 #37
Mus	ANCESTRAL SPECIES	7	ENSGT00940000163522.B ##9	ENSGT00940000162297.l	ENSGT00940000162297.k	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.h.a #17	ENSGT00940000157555.h.b #18	ENSGT00940000160416.m #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000163522.B ##9	ENSGT00940000162297.l	ENSGT00940000162297.k	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.h.a #17	ENSGT00940000157555.h.b #18	ENSGT00940000160416.m #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Mus_B	ANCESTRAL SPECIES	8	ENSGT00940000162297.l	ENSGT00940000162297.k	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.h.a.a #17	ENSGT00940000157555.h.b #18	ENSGT00940000160416.n #19	ENSGT00940000160416.m #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Mouse	MODERN SPECIES	12	Gbp2 (ENSMUSG00000028270)	Kyat3 (ENSMUSG00000040213) #10	Gtf2b (ENSMUSG00000028271) #11	Pkn2 (ENSMUSG00000004591) #12	Lmo4 (ENSMUSG00000028266) #13	Hs2st1 (ENSMUSG00000040151) #14	Selenof (ENSMUSG00000037072) #15	Sh3glb1 (ENSMUSG00000037062) #16	Clca3a1 (ENSMUSG00000056025) #17	Clca3a2 (ENSMUSG00000028262) #17	Clca3b (ENSMUSG00000037033) #18	Clca4b (ENSMUSG00000074195) #19	Clca4a (ENSMUSG00000068547) #19	Clca1 (ENSMUSG00000028255) #20	Clca2 (ENSMUSG00000036960) #21	Odf2l (ENSMUSG00000028256) #22	Col24a1 (ENSMUSG00000028197) #23	Znhit6 (ENSMUSG00000074182) #24	Ccn1 (ENSMUSG00000028195) #25	Ddah1 (ENSMUSG00000028194) #26	Bcl10 (ENSMUSG00000028191) #27	2410004B18Rik (ENSMUSG00000036873) #28	Syde2 (ENSMUSG00000036863) #29	Dnai3 (ENSMUSG00000043020) #30	Mcoln3 (ENSMUSG00000036853) #31	Mcoln2 (ENSMUSG00000011008) #32	Lpar3 (ENSMUSG00000036832) #33	Ssx2ip (ENSMUSG00000036825) #34	Ctbs (ENSMUSG00000028189) #35	Spata1 (ENSMUSG00000028188) #36	Gng5 (ENSMUSG00000068523) ##37
Mus_C	ANCESTRAL SPECIES	6	ENSGT00940000163522.B ##9	ENSGT00940000162297.l	ENSGT00940000162297.k	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.h.a.a #17	ENSGT00940000157555.h.b #18	ENSGT00940000160416.m #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
spretus	MODERN SPECIES	12	Gbp7 (MGP_SPRETEiJ_G0026648) ##9	Gbp3 (MGP_SPRETEiJ_G0026649) ##9	MGP_SPRETEiJ_G0026650	Gbp2 (MGP_SPRETEiJ_G0026651)	Kyat3 (MGP_SPRETEiJ_G0026652) #10	Gtf2b (MGP_SPRETEiJ_G0026653) #11	Pkn2 (MGP_SPRETEiJ_G0026654) #12	Lmo4 (MGP_SPRETEiJ_G0026655) #13	Hs2st1 (MGP_SPRETEiJ_G0026656) #14	MGP_SPRETEiJ_G0026657	Sh3glb1 (MGP_SPRETEiJ_G0026658) #16	MGP_SPRETEiJ_G0026659 #17	Clca3b (MGP_SPRETEiJ_G0026660) #18	Clca1 (MGP_SPRETEiJ_G0026661) #20	Clca2 (MGP_SPRETEiJ_G0026662) #21	Odf2l (MGP_SPRETEiJ_G0026663) #22	Col24a1 (MGP_SPRETEiJ_G0026664) #23	Znhit6 (MGP_SPRETEiJ_G0026665) #24	Ccn1 (MGP_SPRETEiJ_G0026666) #25	Ddah1 (MGP_SPRETEiJ_G0026667) #26	MGP_SPRETEiJ_G0026668 #27	2410004B18Rik (MGP_SPRETEiJ_G0026669) #28	Syde2 (MGP_SPRETEiJ_G0026670) #29	Dnai3 (MGP_SPRETEiJ_G0026671) #30	MGP_SPRETEiJ_G0026672 #31	Mcoln2 (MGP_SPRETEiJ_G0026673) #32	Lpar3 (MGP_SPRETEiJ_G0026674) #33	Ssx2ip (MGP_SPRETEiJ_G0026675) #34	Ctbs (MGP_SPRETEiJ_G0026676) #35	Spata1 (MGP_SPRETEiJ_G0026677) #36	MGP_SPRETEiJ_G0026678 ##37
Steppe mouse	MODERN SPECIES	2329										Clca3b (ENSMSIG00000002446) #18	ENSMSIG00000002349 #19	Clca4b (ENSMSIG00000002255) #19	ENSMSIG00000002173 #19	Clca1 (ENSMSIG00000002085) #20	Clca2 (ENSMSIG00000001987) #21	Odf2l (ENSMSIG00000001842) #22
Ryukyu mouse	MODERN SPECIES	12	Gbp2 (MGP_CAROLIEiJ_G0025696)	Kyat3 (MGP_CAROLIEiJ_G0025697) #10	Gtf2b (MGP_CAROLIEiJ_G0025698) #11	Pkn2 (MGP_CAROLIEiJ_G0025699) #12	Lmo4 (MGP_CAROLIEiJ_G0025700) #13	Hs2st1 (MGP_CAROLIEiJ_G0025701) #14	MGP_CAROLIEiJ_G0025702	Sh3glb1 (MGP_CAROLIEiJ_G0025703) #16	MGP_CAROLIEiJ_G0025704 #17	MGP_CAROLIEiJ_G0025705 #17	Clca3b (MGP_CAROLIEiJ_G0025706) #18	MGP_CAROLIEiJ_G0025707 #19	MGP_CAROLIEiJ_G0025708 #19	Clca1 (MGP_CAROLIEiJ_G0025709) #20	Clca2 (MGP_CAROLIEiJ_G0025710) #21	Odf2l (MGP_CAROLIEiJ_G0025711) #22	Col24a1 (MGP_CAROLIEiJ_G0025712) #23	Znhit6 (MGP_CAROLIEiJ_G0025713) #24	Ccn1 (MGP_CAROLIEiJ_G0025714) #25	Ddah1 (MGP_CAROLIEiJ_G0025715) #26	2410004B18Rik (MGP_CAROLIEiJ_G0025716) #28	Syde2 (MGP_CAROLIEiJ_G0025717) #29	Dnai3 (MGP_CAROLIEiJ_G0025718) #30	Mcoln3 (MGP_CAROLIEiJ_G0025719) #31	Mcoln2 (MGP_CAROLIEiJ_G0025720) #32	Lpar3 (MGP_CAROLIEiJ_G0025721) #33	Ssx2ip (MGP_CAROLIEiJ_G0025722) #34	Ctbs (MGP_CAROLIEiJ_G0025723) #35	Spata1 (MGP_CAROLIEiJ_G0025724) #36	MGP_CAROLIEiJ_G0025725 ##37	Rpf1 (MGP_CAROLIEiJ_G0025726)
Shrew mouse	MODERN SPECIES	17	Gbp2 (MGP_PahariEiJ_G0027145)	Kyat3 (MGP_PahariEiJ_G0027147) #10	Gtf2b (MGP_PahariEiJ_G0027148) #11	Pkn2 (MGP_PahariEiJ_G0027149) #12	Lmo4 (MGP_PahariEiJ_G0027150) #13	Hs2st1 (MGP_PahariEiJ_G0027151) #14	MGP_PahariEiJ_G0027152	Sh3glb1 (MGP_PahariEiJ_G0027153) #16	MGP_PahariEiJ_G0027154 #17	MGP_PahariEiJ_G0027155 #17	Clca3b (MGP_PahariEiJ_G0027156) #18	MGP_PahariEiJ_G0027157 #19	MGP_PahariEiJ_G0027158 #19	Clca1 (MGP_PahariEiJ_G0027159) #20	Clca2 (MGP_PahariEiJ_G0027160) #21	Odf2l (MGP_PahariEiJ_G0027161) #22	Col24a1 (MGP_PahariEiJ_G0027162) #23	Znhit6 (MGP_PahariEiJ_G0027163) #24	Ccn1 (MGP_PahariEiJ_G0027164) #25	Ddah1 (MGP_PahariEiJ_G0027165) #26	Bcl10 (MGP_PahariEiJ_G0027166) #27	2410004B18Rik (MGP_PahariEiJ_G0027167) #28	Syde2 (MGP_PahariEiJ_G0027168) #29	Dnai3 (MGP_PahariEiJ_G0027169) #30	Mcoln3 (MGP_PahariEiJ_G0027170) #31	Mcoln2 (MGP_PahariEiJ_G0027171) #32	Lpar3 (MGP_PahariEiJ_G0027172) #33	Ssx2ip (MGP_PahariEiJ_G0027173) #34	Ctbs (MGP_PahariEiJ_G0027174) #35	Spata1 (MGP_PahariEiJ_G0027175) #36	MGP_PahariEiJ_G0027176 ##37
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00940000156840.b.w #7	ENSGT00940000156840.b.x #8	ENSGT00940000156840.a.b ##8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.g.a ##18	ENSGT00940000157555.g.b ##18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892.j #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00940000156840.b.w #7	ENSGT00940000156840.b.x #8	ENSGT00940000156840.a.b ##8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.g.a ##18	ENSGT00940000157555.g.b ##18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892.j #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Northern American deer mouse	MODERN SPECIES	19	ENSPEMG00000028796 ##8	ENSPEMG00000031096 ##8	Kyat3 (ENSPEMG00000020874) #10	Gtf2b (ENSPEMG00000024196) #11	Pkn2 (ENSPEMG00000020406) #12	Lmo4 (ENSPEMG00000020893) #13	Hs2st1 (ENSPEMG00000020842) #14	Selenof (ENSPEMG00000020473) #15	Sh3glb1 (ENSPEMG00000030955) #16	ENSPEMG00000022101 ##18	ENSPEMG00000022445 ##18	ENSPEMG00000021736 ##18	ENSPEMG00000007919 #19	Clca1 (ENSPEMG00000023001) #20	Clca2 (ENSPEMG00000021862) #21	Odf2l (ENSPEMG00000022035) #22	Col24a1 (ENSPEMG00000010634) #23	Znhit6 (ENSPEMG00000022716) #24	Ccn1 (ENSPEMG00000000386) #25	ENSPEMG00000031409	Ddah1 (ENSPEMG00000027558) #26	Bcl10 (ENSPEMG00000026389) #27	ENSPEMG00000028265 #28	Syde2 (ENSPEMG00000022180) #29	Dnai3 (ENSPEMG00000023437) #30	Mcoln3 (ENSPEMG00000014566) #31	Mcoln2 (ENSPEMG00000015343) #32	Lpar3 (ENSPEMG00000022406) #33	Ssx2ip (ENSPEMG00000023032) #34	Ctbs (ENSPEMG00000006184) #35	Spata1 (ENSPEMG00000023282) #36
Prairie vole	MODERN SPECIES	8	ENSMOCG00000018710	ENSMOCG00000005605 ##9	Kyat3 (ENSMOCG00000022796) #10	ENSMOCG00000013457 #11	Pkn2 (ENSMOCG00000002664) #12	Lmo4 (ENSMOCG00000012271) #13	Hs2st1 (ENSMOCG00000021551) #14	Selenof (ENSMOCG00000002490) #15	Sh3glb1 (ENSMOCG00000013092) #16	ENSMOCG00000000717 ##18	ENSMOCG00000005395 ##18	ENSMOCG00000016514 #19	ENSMOCG00000009777	Clca1 (ENSMOCG00000015412) #20	Clca2 (ENSMOCG00000021161) #21	Odf2l (ENSMOCG00000013411) #22	Col24a1 (ENSMOCG00000010555) #23	Znhit6 (ENSMOCG00000011010) #24	Ccn1 (ENSMOCG00000013502) #25	ENSMOCG00000009612	Ddah1 (ENSMOCG00000018589) #26	Bcl10 (ENSMOCG00000004469) #27	2410004B18Rik (ENSMOCG00000000971) #28	Syde2 (ENSMOCG00000011613) #29	Dnai3 (ENSMOCG00000004827) #30	Mcoln3 (ENSMOCG00000011948) #31	Mcoln2 (ENSMOCG00000005258) #32	Lpar3 (ENSMOCG00000012201) #33	Ssx2ip (ENSMOCG00000014448) #34	Ctbs (ENSMOCG00000020087) #35	ENSMOCG00000022893 #36
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00940000162297.l	ENSGT00940000162297.k	ENSGT00940000163522.A.g.a #9	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.g.a ##18	ENSGT00940000157555.g.b ##18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892.j #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Chinese hamster chok1gshd	MODERN SPECIES	219				Gtf2b (ENSCGRG00001022382) #11	Pkn2 (ENSCGRG00001016380) #12	Lmo4 (ENSCGRG00001023324) #13	ENSCGRG00001007720	Hs2st1 (ENSCGRG00001010979) #14	Selenof (ENSCGRG00001004806) #15	Sh3glb1 (ENSCGRG00001002284) #16	ENSCGRG00001022589 ##18	ENSCGRG00001018022 ##18	ENSCGRG00001017040 #19	Clca1 (ENSCGRG00001016411) #20	Clca2 (ENSCGRG00001014297) #21	Odf2l (ENSCGRG00001012670) #22	Col24a1 (ENSCGRG00001021909) #23	Znhit6 (ENSCGRG00001018263) #24	Ccn1 (ENSCGRG00001017662) #25	ENSCGRG00001016514	Ddah1 (ENSCGRG00001019335) #26	Bcl10 (ENSCGRG00001018169) #27	2410004B18Rik (ENSCGRG00001015888) #28	Syde2 (ENSCGRG00001014086) #29	ENSCGRG00001011030 #30	Mcoln3 (ENSCGRG00001004877) #31	Mcoln2 (ENSCGRG00001001707) #32	Lpar3 (ENSCGRG00001024413) #33	Ssx2ip (ENSCGRG00001019268) #34	Ctbs (ENSCGRG00001014407) #35	Spata1 (ENSCGRG00001008771) #36
Golden Hamster	MODERN SPECIES	735	Gbp2 (ENSMAUG00000014482)	ENSMAUG00000001511 #9	Kyat3 (ENSMAUG00000020779) #10	Gtf2b (ENSMAUG00000013321) #11	ENSMAUG00000009813 #12	ENSMAUG00000016021 #12	Lmo4 (ENSMAUG00000012795) #13	Hs2st1 (ENSMAUG00000009309) #14	Selenof (ENSMAUG00000002011) #15	ENSMAUG00000008381 #16	ENSMAUG00000018947 ##18	ENSMAUG00000017339 ##18	ENSMAUG00000014124 #19	Clca1 (ENSMAUG00000020334) #20	Clca2 (ENSMAUG00000020634) #21	Odf2l (ENSMAUG00000001252) #22	Col24a1 (ENSMAUG00000010161) #23	ENSMAUG00000020898 #24	Ccn1 (ENSMAUG00000006075) #25	ENSMAUG00000017168	Ddah1 (ENSMAUG00000012623) #26	ENSMAUG00000011334 #27	2410004B18Rik (ENSMAUG00000019352) #28	Syde2 (ENSMAUG00000017505) #29	Dnai3 (ENSMAUG00000005774) #30	Mcoln3 (ENSMAUG00000018992) #31	Mcoln2 (ENSMAUG00000006761) #32	Ssx2ip (ENSMAUG00000013155) #34	ENSMAUG00000008498	Spata1 (ENSMAUG00000008313) #36	ENSMAUG00000019525 #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1893								ENSNGAG00000017891	ENSNGAG00000011552	Sh3glb1 (ENSNGAG00000008323) #16	ENSNGAG00000022151 ##18	ENSNGAG00000020840 #18	ENSNGAG00000021773 #19	Clca1 (ENSNGAG00000020353) #20	Clca2 (ENSNGAG00000017320) #21	Odf2l (ENSNGAG00000018510) #22	ENSNGAG00000015725	Znhit6 (ENSNGAG00000007630) #24	Ccn1 (ENSNGAG00000001335) #25	ENSNGAG00000003738	Ddah1 (ENSNGAG00000018033) #26	Bcl10 (ENSNGAG00000015335) #27	2410004B18Rik (ENSNGAG00000014421) #28	Syde2 (ENSNGAG00000012962) #29	Dnai3 (ENSNGAG00000011144) #30	Mcoln3 (ENSNGAG00000018883) #31	Mcoln2 (ENSNGAG00000016270) #32	Lpar3 (ENSNGAG00000020209) #33	Ssx2ip (ENSNGAG00000001910) #34	Ctbs (ENSNGAG00000008828) #35	Spata1 (ENSNGAG00000019652) #36
Lesser Egyptian jerboa	MODERN SPECIES	52	Gbp5 (ENSJJAG00000002928)	Gbp7 (ENSJJAG00000016280) ##9	ENSJJAG00000015984	Kyat3 (ENSJJAG00000023537) #10	ENSJJAG00000017747 #11	ENSJJAG00000018524 #12	ENSJJAG00000011358 #12	Lmo4 (ENSJJAG00000012847) #13	Hs2st1 (ENSJJAG00000000519) #14	ENSJJAG00000009914	Sh3glb1 (ENSJJAG00000018470) #16	ENSJJAG00000018844 #18	ENSJJAG00000023348 #19	Clca1 (ENSJJAG00000008764) #20	Clca2 (ENSJJAG00000012700) #21	Odf2l (ENSJJAG00000007954) #22	ENSJJAG00000020958	Znhit6 (ENSJJAG00000021153) #24	Ccn1 (ENSJJAG00000018163) #25	ENSJJAG00000012670	Ddah1 (ENSJJAG00000016256) #26	Bcl10 (ENSJJAG00000001473) #27	2410004B18Rik (ENSJJAG00000011597) #28	Syde2 (ENSJJAG00000018610) #29	Dnai3 (ENSJJAG00000023564) #30	Mcoln3 (ENSJJAG00000023078) #31	Mcoln2 (ENSJJAG00000014832) #32	Lpar3 (ENSJJAG00000021688) #33	Ssx2ip (ENSJJAG00000010467) #34	Ctbs (ENSJJAG00000018386) #35	ENSJJAG00000006619 #36
Kangaroo rat	MODERN SPECIES	358	Gja8 (ENSDORG00000000930)	ENSDORG00000016000	Bcl9 (ENSDORG00000003296)	Chd1l (ENSDORG00000013555)	ENSDORG00000001332	ENSDORG00000000256	Prkab2 (ENSDORG00000027473)	ENSDORG00000024515	Sec22b (ENSDORG00000023311)	Notch2 (ENSDORG00000001171)	Reg4 (ENSDORG00000009271)	Hmgcs2 (ENSDORG00000008532)	Phgdh (ENSDORG00000008531)	Clca1 (ENSDORG00000008434) #20	Clca2 (ENSDORG00000009200) #21	Odf2l (ENSDORG00000009195) #22	ENSDORG00000015616	Znhit6 (ENSDORG00000029755) #24	Ccn1 (ENSDORG00000005602) #25	Ddah1 (ENSDORG00000013259) #26	ENSDORG00000028780 #27	2410004B18Rik (ENSDORG00000012509) #28	Syde2 (ENSDORG00000005799) #29	Dnai3 (ENSDORG00000015030) #30	Mcoln3 (ENSDORG00000014635) #31	Mcoln2 (ENSDORG00000014631) #32	Lpar3 (ENSDORG00000014630) #33	Ssx2ip (ENSDORG00000015060) #34	Ctbs (ENSDORG00000015059) #35	ENSDORG00000029065 #36	ENSDORG00000029873 #36
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416.p #19	ENSGT00940000160416.o #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Hystricomorpha	ANCESTRAL SPECIES	44	ENSGT00940000162684	ENSGT00940000154265	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416.p #19	ENSGT00940000160416.o #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00940000154265	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416.o.f #19	ENSGT00940000160416.p #19	ENSGT00940000160416.o.e #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00940000162370	ENSGT00940000163522.A #9	ENSGT00940000154265	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416.o.e #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000160313.k	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Long-tailed chinchilla	MODERN SPECIES	130	ENSCLAG00000009272 #8	KYAT3 (ENSCLAG00000009697) #10	ENSCLAG00000009967	GTF2B (ENSCLAG00000003857) #11	PKN2 (ENSCLAG00000003946) #12	LMO4 (ENSCLAG00000004652) #13	HS2ST1 (ENSCLAG00000004928) #14	SELENOF (ENSCLAG00000004997) #15	SH3GLB1 (ENSCLAG00000005868) #16	ENSCLAG00000009271 #18	ENSCLAG00000009598 #18	ENSCLAG00000010819 #19	ENSCLAG00000007523 #19	CLCA1 (ENSCLAG00000008032) #20	CLCA2 (ENSCLAG00000004004) #21	ODF2L (ENSCLAG00000004825) #22	ENSCLAG00000006341	COL24A1 (ENSCLAG00000009364)	ENSCLAG00000011135	ZNHIT6 (ENSCLAG00000011251) #24	CCN1 (ENSCLAG00000015005) #25	ENSCLAG00000017789	DDAH1 (ENSCLAG00000003885) #26	BCL10 (ENSCLAG00000003932) #27	C1orf52 (ENSCLAG00000003961) #28	SYDE2 (ENSCLAG00000004038) #29	DNAI3 (ENSCLAG00000004279) #30	MCOLN3 (ENSCLAG00000004543) #31	MCOLN2 (ENSCLAG00000004888) #32	LPAR3 (ENSCLAG00000005453) #33	SSX2IP (ENSCLAG00000012846) #34
Degu	MODERN SPECIES	150	ENSODEG00000005921 #12	PKN2 (ENSODEG00000006053) #12	ENSODEG00000002715	ENSODEG00000002725	LMO4 (ENSODEG00000002768) #13	ENSODEG00000018964	HS2ST1 (ENSODEG00000002834) #14	ENSODEG00000002901	ENSODEG00000002911	SH3GLB1 (ENSODEG00000003003) #16	ENSODEG00000002661 #18	ENSODEG00000002677 #18	ENSODEG00000002712 #19	ENSODEG00000002790 #19	CLCA2 (ENSODEG00000002864) #21	ODF2L (ENSODEG00000002955) #22	ENSODEG00000003023	COL24A1 (ENSODEG00000003113)	ZNHIT6 (ENSODEG00000003486) #24	CCN1 (ENSODEG00000003521) #25	ENSODEG00000018975	DDAH1 (ENSODEG00000003545) #26	BCL10 (ENSODEG00000003555) #27	ENSODEG00000003582 #28	ENSODEG00000003641	SYDE2 (ENSODEG00000003681) #29	DNAI3 (ENSODEG00000003772) #30	MCOLN3 (ENSODEG00000004499) #31	MCOLN2 (ENSODEG00000004650) #32	LPAR3 (ENSODEG00000004676) #33	ENSODEG00000019111
Guinea pig	MODERN SPECIES	2	TXNIP (ENSCPOG00000027326)	HJV (ENSCPOG00000010745)	KYAT3 (ENSCPOG00000009695) #10	GTF2B (ENSCPOG00000014028) #11	PKN2 (ENSCPOG00000000537) #12	LMO4 (ENSCPOG00000012113) #13	HS2ST1 (ENSCPOG00000005010) #14	SELENOF (ENSCPOG00000037223) #15	SH3GLB1 (ENSCPOG00000015176) #16	ENSCPOG00000015253 #18	ENSCPOG00000039214 #19	ENSCPOG00000001098 #19	ENSCPOG00000014950 #19	CLCA1 (ENSCPOG00000014947) #20	CLCA2 (ENSCPOG00000014944) #21	ODF2L (ENSCPOG00000004605) #22	COL24A1 (ENSCPOG00000001259)	ZNHIT6 (ENSCPOG00000001258) #24	CCN1 (ENSCPOG00000010120) #25	ENSCPOG00000034357	DDAH1 (ENSCPOG00000035239) #26	BCL10 (ENSCPOG00000033375) #27	C1orf52 (ENSCPOG00000011795) #28	SYDE2 (ENSCPOG00000001552) #29	DNAI3 (ENSCPOG00000001550) #30	MCOLN3 (ENSCPOG00000030466) #31	MCOLN2 (ENSCPOG00000006755) #32	LPAR3 (ENSCPOG00000035050) #33	SSX2IP (ENSCPOG00000012045) #34	CTBS (ENSCPOG00000009243) #35	ENSCPOG00000033072 #36
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	10	GBP1 (ENSHGLG00000008509) #8	CCBL2 (ENSHGLG00000004456) #10	GTF2B (ENSHGLG00000045614) #11	PKN2 (ENSHGLG00000006153) #12	LMO4 (ENSHGLG00000038005) #13	HS2ST1 (ENSHGLG00000008512) #14	SELENOF (ENSHGLG00000044599) #15	ENSHGLG00000006117 #16	ENSHGLG00000007822 #18	ENSHGLG00000035709 #19	ENSHGLG00000012115 #19	ENSHGLG00000015121	ENSHGLG00000037078 #19	CLCA1 (ENSHGLG00000015470) #20	CLCA2 (ENSHGLG00000015413) #21	ENSHGLG00000010829 #22	COL24A1 (ENSHGLG00000004244)	ENSHGLG00000036484	ZNHIT6 (ENSHGLG00000007009) #24	CCN1 (ENSHGLG00000007980) #25	DDAH1 (ENSHGLG00000047230) #26	ENSHGLG00000033883	ENSHGLG00000041300	BCL10 (ENSHGLG00000004369) #27	C1orf52 (ENSHGLG00000004452) #28	ENSHGLG00000039413	SYDE2 (ENSHGLG00000005398) #29	ENSHGLG00000006816 #30	ENSHGLG00000047666	MCOLN3 (ENSHGLG00000009140) #31	ENSHGLG00000005122 #32
Naked mole-rat female	MODERN SPECIES	11	ARF6 (ENSHGLG00000040454)	NEMF (ENSHGLG00000014110)	KLHDC2 (ENSHGLG00000014323)	KLHDC1 (ENSHGLG00000014487)	POLE2 (ENSHGLG00000015308)	ENSHGLG00000032032	ENSHGLG00000010009	MGAT2 (ENSHGLG00000020857)	ENSHGLG00000035140	ENSHGLG00000013547	RPS29 (ENSHGLG00000033323)	ENSHGLG00000047775	ENSHGLG00000038797	ENSHGLG00000033780	ENSHGLG00000017089	ENSHGLG00000036645 #22	ENSHGLG00000016763	ENSHGLG00000032093	ENSHGLG00000048747	ENSHGLG00000048597	ENSHGLG00000040429	ENSHGLG00000019549	ENSHGLG00000000611	ENSHGLG00000016363	FANCM (ENSHGLG00000013787)	ENSHGLG00000012727	FKBP3 (ENSHGLG00000012484)	ENSHGLG00000012015	ENSHGLG00000036376	TOGARAM1 (ENSHGLG00000014098)	KLHL28 (ENSHGLG00000045138)
Naked mole-rat female	MODERN SPECIES	27	ENSHGLG00000048158	ENSHGLG00000008066	ENSHGLG00000009411	ENSHGLG00000038882	ENSHGLG00000049879	ENSHGLG00000009383	PDSS1 (ENSHGLG00000004870)	APBB1IP (ENSHGLG00000006286)	GAD2 (ENSHGLG00000007030)	MYO3A (ENSHGLG00000008329)	ENSHGLG00000048157	ENSHGLG00000004801	ENSHGLG00000040816	ENSHGLG00000034504	ENSHGLG00000044474	ENSHGLG00000047037 #22	ENSHGLG00000044566	ENSHGLG00000045437	ENSHGLG00000004916	ENKUR (ENSHGLG00000005349)	ARHGAP21 (ENSHGLG00000008443)	ENSHGLG00000036882	ENSHGLG00000008277	ENSHGLG00000011626	ENSHGLG00000038637	ENSHGLG00000013293	MSRB2 (ENSHGLG00000009558)	ARMC3 (ENSHGLG00000010508)	PIP4K2A (ENSHGLG00000041790)	ENSHGLG00000047021	BMI1 (ENSHGLG00000032421)
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000163522.A #9	ENSGT00940000156840.b #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416.p #19	ENSGT00940000160416.o #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00940000168548	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Marmotini	ANCESTRAL SPECIES		ENSGT00940000163522.A.d #9	ENSGT00940000163522.A.c.a #9	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416.p #19	ENSGT00940000160416.o.a #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00940000168548	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000003718.d.kd.b	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34
Marmotini_b	ANCESTRAL SPECIES	166														ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000003718.d.kd.b	ENSGT00390000017398.i #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Arctic ground squirrel	MODERN SPECIES	330														CLCA1 (ENSUPAG00010012033) #20	CLCA2 (ENSUPAG00010011985) #21	ODF2L (ENSUPAG00010011819) #22	ENSUPAG00010011804	ZNHIT6 (ENSUPAG00010011778) #24	CCN1 (ENSUPAG00010011774) #25	ENSUPAG00010011773	DDAH1 (ENSUPAG00010011761) #26	BCL10 (ENSUPAG00010011755) #27	ENSUPAG00010011746	ENSUPAG00010011740 #28	SYDE2 (ENSUPAG00010011732) #29	DNAI3 (ENSUPAG00010011711) #30	MCOLN3 (ENSUPAG00010011700) #31	MCOLN2 (ENSUPAG00010011678) #32	LPAR3 (ENSUPAG00010011664) #33	SSX2IP (ENSUPAG00010011627) #34	CTBS (ENSUPAG00010011611) #35
Squirrel	MODERN SPECIES	464															CLCA2 (ENSSTOG00000001512) #21	ODF2L (ENSSTOG00000001496) #22	ENSSTOG00000009458
Alpin marmot	MODERN SPECIES	96	GBP1 (ENSMMMG00000006605) #8	KYAT3 (ENSMMMG00000006615) #10	GTF2B (ENSMMMG00000006649) #11	PKN2 (ENSMMMG00000006656) #12	LMO4 (ENSMMMG00000006756) #13	HS2ST1 (ENSMMMG00000006768) #14	SELENOF (ENSMMMG00000006786) #15	SH3GLB1 (ENSMMMG00000006806) #16	ENSMMMG00000006864	ENSMMMG00000006866 #18	ENSMMMG00000006883 #19	ENSMMMG00000007100 #19	ENSMMMG00000008525 #19	CLCA1 (ENSMMMG00000008544) #20	CLCA2 (ENSMMMG00000008561) #21	ODF2L (ENSMMMG00000008590) #22	ENSMMMG00000008742	ENSMMMG00000008750	ENSMMMG00000008758	ZNHIT6 (ENSMMMG00000008767) #24	CCN1 (ENSMMMG00000008796) #25	ENSMMMG00000008810	DDAH1 (ENSMMMG00000008813) #26	ENSMMMG00000008820 #27	ENSMMMG00000008825	C1orf52 (ENSMMMG00000008832) #28	SYDE2 (ENSMMMG00000008839) #29	DNAI3 (ENSMMMG00000008854) #30	MCOLN3 (ENSMMMG00000008888) #31	MCOLN2 (ENSMMMG00000008910) #32	LPAR3 (ENSMMMG00000008955) #33
Eurasian red squirrel	MODERN SPECIES		GTF2B (ENSSVLG00005002028) #11	ENSSVLG00005002015	PKN2 (ENSSVLG00005001961) #12	ENSSVLG00005001932	LMO4 (ENSSVLG00005001906) #13	ENSSVLG00005001891	HS2ST1 (ENSSVLG00005001867) #14	ENSSVLG00005001852	SELENOF (ENSSVLG00005001833) #15	SH3GLB1 (ENSSVLG00005001770) #16	ENSSVLG00005001691 #18	ENSSVLG00005001399 #19	ENSSVLG00005001134 #19	CLCA1 (ENSSVLG00005001099) #20	CLCA2 (ENSSVLG00005001063) #21	ODF2L (ENSSVLG00005001026) #22	ENSSVLG00005000969	ENSSVLG00005000957	COL24A1 (ENSSVLG00005000916)	ENSSVLG00005000886	ZNHIT6 (ENSSVLG00005000846) #24	ENSSVLG00005000810	CCN1 (ENSSVLG00005000795) #25	ENSSVLG00005000783	ENSSVLG00005000769	DDAH1 (ENSSVLG00005000747) #26	ENSSVLG00005000713	ENSSVLG00005000702	BCL10 (ENSSVLG00005000684) #27	C1orf52 (ENSSVLG00005000674) #28	GABARAP (ENSSVLG00005000657)
Lagomorpha	ANCESTRAL SPECIES	73				ENSGT00940000162370	ENSGT00940000162684	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00960000193082	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Rabbit	MODERN SPECIES	4	FSD1 (ENSOCUG00000027576)	LMO4 (ENSOCUG00000012639) #13	HS2ST1 (ENSOCUG00000010672) #14	SELENOF (ENSOCUG00000034491) #15	ENSOCUG00000030583	SH3GLB1 (ENSOCUG00000003553) #16	ENSOCUG00000036504	ENSOCUG00000003548 #18	ENSOCUG00000038916 #19	ENSOCUG00000030334	ENSOCUG00000025724	ENSOCUG00000015437 #19	ENSOCUG00000033661	CLCA1 (ENSOCUG00000004736) #20	CLCA2 (ENSOCUG00000004727) #21	ODF2L (ENSOCUG00000001834) #22	ENSOCUG00000036832	COL24A1 (ENSOCUG00000003917)	ZNHIT6 (ENSOCUG00000003910) #24	CCN1 (ENSOCUG00000003905) #25	ENSOCUG00000026503	DDAH1 (ENSOCUG00000005249) #26	BCL10 (ENSOCUG00000016199) #27	ENSOCUG00000035286	C1orf52 (ENSOCUG00000002803) #28	SYDE2 (ENSOCUG00000022246) #29	DNAI3 (ENSOCUG00000010160) #30	MCOLN3 (ENSOCUG00000009332) #31	MCOLN2 (ENSOCUG00000009322) #32	ENSOCUG00000027616	LPAR3 (ENSOCUG00000024789) #33
Pika	MODERN SPECIES	710																ODF2L (ENSOPRG00000008320) #22
Tree shrew	MODERN SPECIES	962														CLCA1 (ENSTBEG00000004737) #20	CLCA2 (ENSTBEG00000004402) #21	ODF2L (ENSTBEG00000004092) #22
Primates	ANCESTRAL SPECIES	4	ENSGT00940000162297	ENSGT00940000156840.b #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00940000162297	ENSGT00940000156840.b #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00940000162297	ENSGT00940000156840.b #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00940000164799	ENSGT00940000153425.a.a.b.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000164507	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00940000164799	ENSGT00940000153425.a.a.b.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000164507	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Gibbon	MODERN SPECIES	2	GBP3 (ENSNLEG00000010234)	KYAT3 (ENSNLEG00000010220) #10	GTF2B (ENSNLEG00000010216) #11	ENSNLEG00000010197 #12	LMO4 (ENSNLEG00000010195) #13	ENSNLEG00000010194	HS2ST1 (ENSNLEG00000010190) #14	ENSNLEG00000010186 #15	SH3GLB1 (ENSNLEG00000010180) #16	ENSNLEG00000035396	ENSNLEG00000029420 #18	CLCA4 (ENSNLEG00000010158) #19	ENSNLEG00000010178	CLCA1 (ENSNLEG00000010144) #20	CLCA2 (ENSNLEG00000010136) #21	ODF2L (ENSNLEG00000010126) #22	COL24A1 (ENSNLEG00000010050)	ZNHIT6 (ENSNLEG00000010042) #24	CCN1 (ENSNLEG00000010037) #25	DDAH1 (ENSNLEG00000010030) #26	ENSNLEG00000032635 #27	C1orf52 (ENSNLEG00000010021) #28	SYDE2 (ENSNLEG00000010018) #29	DNAI3 (ENSNLEG00000010010) #30	MCOLN3 (ENSNLEG00000009997) #31	MCOLN2 (ENSNLEG00000009988) #32	LPAR3 (ENSNLEG00000009986) #33	SSX2IP (ENSNLEG00000009961) #34	CTBS (ENSNLEG00000009947) #35	ENSNLEG00000009935 #36	ENSNLEG00000009934 ##37
Hominidae	ANCESTRAL SPECIES	3	ENSGT00940000164799	ENSGT00940000153425.a.a.b.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000164507	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Orangutan	MODERN SPECIES		ENSPPYG00000001173	GBP1 (ENSPPYG00000001174) #8	GBP3 (ENSPPYG00000001175)	ENSPPYG00000001176	GTF2B (ENSPPYG00000001178) #11	ENSPPYG00000001179	PKN2 (ENSPPYG00000001180) #12	LMO4 (ENSPPYG00000035178) #13	HS2ST1 (ENSPPYG00000001183) #14	ENSPPYG00000041718 #15	SH3GLB1 (ENSPPYG00000001185) #16	ENSPPYG00000039489 #18	CLCA4 (ENSPPYG00000001186) #19	CLCA1 (ENSPPYG00000001187) #20	CLCA2 (ENSPPYG00000001188) #21	ODF2L (ENSPPYG00000001189) #22	COL24A1 (ENSPPYG00000001190)	ZNHIT6 (ENSPPYG00000001191) #24	CCN1 (ENSPPYG00000001192) #25	DDAH1 (ENSPPYG00000001193) #26	BCL10 (ENSPPYG00000001194) #27	DNAI3 (ENSPPYG00000001197) #30	C1orf52 (ENSPPYG00000001195) #28	SYDE2 (ENSPPYG00000001196) #29	MCOLN3 (ENSPPYG00000001198) #31	MCOLN2 (ENSPPYG00000001199) #32	LPAR3 (ENSPPYG00000001200) #33	SSX2IP (ENSPPYG00000001201) #34	CTBS (ENSPPYG00000001203) #35	SPATA1 (ENSPPYG00000001204) #36	GNG5 (ENSPPYG00000040658)
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00530000063497.b.e #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00530000063497.b.e #22
Human	MODERN SPECIES		GBP2 (ENSG00000162645)	GBP1 (ENSG00000117228) #8	GBP3 (ENSG00000117226)	RBMXL1 (ENSG00000213516)	KYAT3 (ENSG00000137944) #10	GTF2B (ENSG00000137947) #11	PKN2 (ENSG00000065243) #12	LMO4 (ENSG00000143013) #13	ENSG00000267561	HS2ST1 (ENSG00000153936) #14	SELENOF (ENSG00000183291) #15	SH3GLB1 (ENSG00000097033) #16	CLCA4 (ENSG00000016602) #19	CLCA1 (ENSG00000016490) #20	CLCA2 (ENSG00000137975) #21	ODF2L (ENSG00000122417) #22	COL24A1 (ENSG00000171502)	ZNHIT6 (ENSG00000117174) #24	CCN1 (ENSG00000142871) #25	DDAH1 (ENSG00000153904) #26	BCL10 (ENSG00000142867) #27	C1orf52 (ENSG00000162642) #28	SYDE2 (ENSG00000097096) #29	MCOLN3 (ENSG00000055732) #31	DNAI3 (ENSG00000162643) #30	MCOLN2 (ENSG00000153898) #32	LPAR3 (ENSG00000171517) #33	SSX2IP (ENSG00000117155) #34	CTBS (ENSG00000117151) #35	SPATA1 (ENSG00000122432) #36	GNG5 (ENSG00000174021) ##37
Gorilla	MODERN SPECIES		SSX2IP (ENSGGOG00000002229) #34	LPAR3 (ENSGGOG00000011067) #33	MCOLN2 (ENSGGOG00000012178) #32	MCOLN3 (ENSGGOG00000007413) #31	DNAI3 (ENSGGOG00000024273) #30	SYDE2 (ENSGGOG00000002813) #29	C1orf52 (ENSGGOG00000027688) #28	ENSGGOG00000044072 #27	ENSGGOG00000041543 #26	ENSGGOG00000037302	CCN1 (ENSGGOG00000006978) #25	ZNHIT6 (ENSGGOG00000001289) #24	COL24A1 (ENSGGOG00000000424)	ENSGGOG00000022054	ODF2L (ENSGGOG00000002571) #22	ODF2L (ENSGGOG00000039102) #22	ENSGGOG00000036344	CLCA2 (ENSGGOG00000003746) #21	CLCA1 (ENSGGOG00000011756) #20	CLCA4 (ENSGGOG00000014623) #19	ENSGGOG00000043813	ENSGGOG00000043302 #18	SH3GLB1 (ENSGGOG00000042521) #16	ENSGGOG00000025346 #15	HS2ST1 (ENSGGOG00000040966) #14	ENSGGOG00000042624	ENSGGOG00000036389	LMO4 (ENSGGOG00000000364) #13	PKN2 (ENSGGOG00000008937) #12	GTF2B (ENSGGOG00000015017) #11	KYAT3 (ENSGGOG00000012016) #10
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00940000164799	ENSGT00940000153425.a.a.b.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000164507	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b.f #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00940000164799	ENSGT00940000153425.a.a.b.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000164507	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b.f #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Pan	ANCESTRAL SPECIES		ENSGT00940000156840.b.q #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000164507	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b.f #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Chimpanzee	MODERN SPECIES		GBP3 (ENSPTRG00000000934)	KYAT3 (ENSPTRG00000041247) #10	GTF2B (ENSPTRG00000000932) #11	PKN2 (ENSPTRG00000000931) #12	LMO4 (ENSPTRG00000000929) #13	ENSPTRG00000050797	ENSPTRG00000052650	HS2ST1 (ENSPTRG00000000927) #14	SELENOF (ENSPTRG00000046631) #15	SH3GLB1 (ENSPTRG00000000925) #16	ENSPTRG00000051840 #18	ENSPTRG00000044041 #18	CLCA4 (ENSPTRG00000000923) #19	CLCA1 (ENSPTRG00000000922) #20	CLCA2 (ENSPTRG00000000921) #21	ODF2L (ENSPTRG00000000919) #22	COL24A1 (ENSPTRG00000052159)	ZNHIT6 (ENSPTRG00000000917) #24	CCN1 (ENSPTRG00000000916) #25	ENSPTRG00000045650	DDAH1 (ENSPTRG00000000915) #26	BCL10 (ENSPTRG00000000914) #27	C1H1orf52 (ENSPTRG00000000913) #28	SYDE2 (ENSPTRG00000000912) #29	DNAI3 (ENSPTRG00000000910) #30	MCOLN3 (ENSPTRG00000000909) #31	MCOLN2 (ENSPTRG00000000908) #32	LPAR3 (ENSPTRG00000000907) #33	SSX2IP (ENSPTRG00000000906) #34	CTBS (ENSPTRG00000000904) #35	SPATA1 (ENSPTRG00000000903) #36
Bonobo	MODERN SPECIES		GBP3 (ENSPPAG00000030124)	ENSPPAG00000026662	KYAT3 (ENSPPAG00000036230) #10	GTF2B (ENSPPAG00000040245) #11	PKN2 (ENSPPAG00000029657) #12	LMO4 (ENSPPAG00000039370) #13	ENSPPAG00000007461	ENSPPAG00000032573	HS2ST1 (ENSPPAG00000039539) #14	SELENOF (ENSPPAG00000034847) #15	SH3GLB1 (ENSPPAG00000037511) #16	ENSPPAG00000027864 #18	CLCA4 (ENSPPAG00000030240) #19	CLCA1 (ENSPPAG00000042810) #20	CLCA2 (ENSPPAG00000037646) #21	ODF2L (ENSPPAG00000035946) #22	COL24A1 (ENSPPAG00000031760)	ZNHIT6 (ENSPPAG00000044095) #24	CCN1 (ENSPPAG00000036034) #25	ENSPPAG00000008964	ENSPPAG00000032273 #26	ENSPPAG00000039334 #27	C1orf52 (ENSPPAG00000033419) #28	SYDE2 (ENSPPAG00000008094) #29	DNAI3 (ENSPPAG00000028762) #30	MCOLN3 (ENSPPAG00000018460) #31	MCOLN2 (ENSPPAG00000035292) #32	LPAR3 (ENSPPAG00000042081) #33	SSX2IP (ENSPPAG00000030204) #34	CTBS (ENSPPAG00000041122) #35	SPATA1 (ENSPPAG00000031268) #36
Gorilla	MODERN SPECIES		GTF2B (ENSGGOG00000015017) #11	PKN2 (ENSGGOG00000008937) #12	LMO4 (ENSGGOG00000000364) #13	ENSGGOG00000036389	ENSGGOG00000042624	HS2ST1 (ENSGGOG00000040966) #14	ENSGGOG00000025346 #15	SH3GLB1 (ENSGGOG00000042521) #16	ENSGGOG00000043302 #18	ENSGGOG00000043813	CLCA4 (ENSGGOG00000014623) #19	CLCA1 (ENSGGOG00000011756) #20	CLCA2 (ENSGGOG00000003746) #21	ENSGGOG00000036344	ODF2L (ENSGGOG00000039102) #22	ODF2L (ENSGGOG00000002571) #22	ENSGGOG00000022054	COL24A1 (ENSGGOG00000000424)	ZNHIT6 (ENSGGOG00000001289) #24	CCN1 (ENSGGOG00000006978) #25	ENSGGOG00000037302	ENSGGOG00000041543 #26	ENSGGOG00000044072 #27	C1orf52 (ENSGGOG00000027688) #28	SYDE2 (ENSGGOG00000002813) #29	DNAI3 (ENSGGOG00000024273) #30	MCOLN3 (ENSGGOG00000007413) #31	MCOLN2 (ENSGGOG00000012178) #32	LPAR3 (ENSGGOG00000011067) #33	SSX2IP (ENSGGOG00000002229) #34	CTBS (ENSGGOG00000015738) #35
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00940000164507	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT01040000240503.C.m.b	ENSGT01040000240503.C.n	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Rhinopithecus	ANCESTRAL SPECIES	112	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000164507	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT01040000240503.C.m.b	ENSGT01040000240503.C.n	ENSGT00940000157555 #18	ENSGT00940000155097	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398.o #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a.c #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Golden snub-nosed monkey	MODERN SPECIES	2703													ENSRROG00000036673	CLCA1 (ENSRROG00000028957) #20	CLCA2 (ENSRROG00000032712) #21	ODF2L (ENSRROG00000030918) #22
Black snub-nosed monkey	MODERN SPECIES	137	KYAT3 (ENSRBIG00000031587) #10	GTF2B (ENSRBIG00000041022) #11	PKN2 (ENSRBIG00000022661) #12	LMO4 (ENSRBIG00000035977) #13	ENSRBIG00000036302	HS2ST1 (ENSRBIG00000043881) #14	ENSRBIG00000036503	SELENOF (ENSRBIG00000026319) #15	SH3GLB1 (ENSRBIG00000027795) #16	ENSRBIG00000043193	ENSRBIG00000040098 #18	ENSRBIG00000039377	CLCA4 (ENSRBIG00000031752) #19	CLCA1 (ENSRBIG00000043230) #20	CLCA2 (ENSRBIG00000031853) #21	ODF2L (ENSRBIG00000040478) #22	COL24A1 (ENSRBIG00000040549)	ZNHIT6 (ENSRBIG00000001418) #24	ENSRBIG00000029091	CCN1 (ENSRBIG00000038743) #25	DDAH1 (ENSRBIG00000034663) #26	BCL10 (ENSRBIG00000044051) #27	ENSRBIG00000032729 #28	SYDE2 (ENSRBIG00000034172) #29	DNAI3 (ENSRBIG00000034137) #30	ENSRBIG00000035958 #31	MCOLN2 (ENSRBIG00000032726) #32
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000164799	ENSGT00940000153425.a.a.b.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00940000164507	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT01040000240503.C.m.b	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398.m #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Vervet Monkey	MODERN SPECIES	12	GBP7 (ENSCSAG00000001450)	ENSCSAG00000001449 #8	GBP1 (ENSCSAG00000001448) #8	GBP3 (ENSCSAG00000001447)	KYAT3 (ENSCSAG00000001446) #10	GTF2B (ENSCSAG00000001445) #11	PKN2 (ENSCSAG00000001444) #12	LMO4 (ENSCSAG00000001442) #13	HS2ST1 (ENSCSAG00000001441) #14	SELENOF (ENSCSAG00000001440) #15	SH3GLB1 (ENSCSAG00000001439) #16	ENSCSAG00000001438 #18	CLCA4 (ENSCSAG00000001436) #19	CLCA1 (ENSCSAG00000001434) #20	CLCA2 (ENSCSAG00000001433) #21	ODF2L (ENSCSAG00000001432) #22	COL24A1 (ENSCSAG00000001431)	ZNHIT6 (ENSCSAG00000001430) #24	CCN1 (ENSCSAG00000001429) #25	DDAH1 (ENSCSAG00000001428) #26	BCL10 (ENSCSAG00000001427) #27	ENSCSAG00000001426 #28	SYDE2 (ENSCSAG00000001425) #29	DNAI3 (ENSCSAG00000001424) #30	MCOLN3 (ENSCSAG00000001423) #31	MCOLN2 (ENSCSAG00000001422) #32	LPAR3 (ENSCSAG00000001421) #33	SSX2IP (ENSCSAG00000001420) #34	CTBS (ENSCSAG00000001419) #35	SPATA1 (ENSCSAG00000001418) #36	ENSCSAG00000001417
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000153425.a.a.b.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00940000164507	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT01040000240503.C.m.b	ENSGT01040000240503.C.n	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398.m #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00940000156840.b #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00940000164507	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT01040000240503.C.n	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398.m #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Olive baboon	MODERN SPECIES		KYAT3 (ENSPANG00000007504) #10	ENSPANG00000044649	GTF2B (ENSPANG00000009177) #11	PKN2 (ENSPANG00000007565) #12	ENSPANG00000041848	LMO4 (ENSPANG00000010805) #13	HS2ST1 (ENSPANG00000007566) #14	SELENOF (ENSPANG00000016208) #15	SH3GLB1 (ENSPANG00000022726) #16	ENSPANG00000029610	ENSPANG00000004994 #18	CLCA4 (ENSPANG00000002387) #19	CLCA1 (ENSPANG00000002388) #20	ENSPANG00000050633	CLCA2 (ENSPANG00000030570) #21	ODF2L (ENSPANG00000025618) #22	COL24A1 (ENSPANG00000026362)	ZNHIT6 (ENSPANG00000004996) #24	CCN1 (ENSPANG00000007480) #25	ENSPANG00000016437 #27	C1orf52 (ENSPANG00000016435) #28	SYDE2 (ENSPANG00000010806) #29	ENSPANG00000044964	MCOLN3 (ENSPANG00000006002) #31	DNAI3 (ENSPANG00000000769) #30	MCOLN2 (ENSPANG00000000768) #32	LPAR3 (ENSPANG00000036959) #33	SSX2IP (ENSPANG00000025619) #34	CTBS (ENSPANG00000005231) #35	SPATA1 (ENSPANG00000010807) #36	GNG5 (ENSPANG00000031198) ##37
Cercopithecinae_d	ANCESTRAL SPECIES	19	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00940000164507	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT01040000240503.C.n	ENSGT00940000157555 #18	ENSGT00940000155097	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398.m #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Sooty mangabey	MODERN SPECIES	206	KYAT3 (ENSCATG00000038052) #10	GTF2B (ENSCATG00000044774) #11	PKN2 (ENSCATG00000033010) #12	LMO4 (ENSCATG00000041185) #13	ENSCATG00000026945	HS2ST1 (ENSCATG00000041674) #14	SELENOF (ENSCATG00000029270) #15	ENSCATG00000003617	SH3GLB1 (ENSCATG00000040359) #16	ENSCATG00000030962	ENSCATG00000042894 #18	ENSCATG00000021850	CLCA4 (ENSCATG00000037640) #19	CLCA1 (ENSCATG00000031780) #20	CLCA2 (ENSCATG00000039534) #21	ODF2L (ENSCATG00000038042) #22	COL24A1 (ENSCATG00000039662)	ZNHIT6 (ENSCATG00000042430) #24	ENSCATG00000018597	CCN1 (ENSCATG00000033425) #25	ENSCATG00000017253	DDAH1 (ENSCATG00000029993) #26	BCL10 (ENSCATG00000033396) #27	C1orf52 (ENSCATG00000042900) #28	SYDE2 (ENSCATG00000036631) #29	DNAI3 (ENSCATG00000033130) #30	ENSCATG00000015242	MCOLN3 (ENSCATG00000005637) #31	MCOLN2 (ENSCATG00000031947) #32	LPAR3 (ENSCATG00000032286) #33	SSX2IP (ENSCATG00000041325) #34
Drill	MODERN SPECIES	844	KYAT3 (ENSMLEG00000029073) #10	GTF2B (ENSMLEG00000033327) #11	PKN2 (ENSMLEG00000039178) #12	ENSMLEG00000039386	LMO4 (ENSMLEG00000028302) #13	HS2ST1 (ENSMLEG00000027605) #14	ENSMLEG00000040725	SELENOF (ENSMLEG00000015894) #15	SH3GLB1 (ENSMLEG00000000127) #16	ENSMLEG00000032120	ENSMLEG00000002129 #18	ENSMLEG00000031336	CLCA4 (ENSMLEG00000039886) #19	CLCA1 (ENSMLEG00000035926) #20	CLCA2 (ENSMLEG00000043718) #21	ODF2L (ENSMLEG00000031271) #22	COL24A1 (ENSMLEG00000000835)	ZNHIT6 (ENSMLEG00000035430) #24	ENSMLEG00000022308	CCN1 (ENSMLEG00000033648) #25	ENSMLEG00000000851	DDAH1 (ENSMLEG00000033808) #26	ENSMLEG00000036908	BCL10 (ENSMLEG00000036065) #27	ENSMLEG00000000077 #28	SYDE2 (ENSMLEG00000041726) #29	DNAI3 (ENSMLEG00000036533) #30	MCOLN3 (ENSMLEG00000034178) #31	MCOLN2 (ENSMLEG00000026041) #32	LPAR3 (ENSMLEG00000043685) #33	SSX2IP (ENSMLEG00000024502) #34
Macaca	ANCESTRAL SPECIES		ENSGT00940000164799	ENSGT00940000153425.a.a.b.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00940000164507	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT01040000240503.C.m.b	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398.m #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Macaca_a	ANCESTRAL SPECIES		ENSGT00950000182989.A.j	ENSGT00940000164799	ENSGT00940000153425.a.a.b.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT01040000240503.C.m.b	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00950000182971.B.b.d.`b.b	ENSGT00940000164709.a.b.b.a.b.b.a.b.a.b.a	ENSGT00490000043442 #27	ENSGT00390000017398.m #28	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.b.b	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34
Crab-eating macaque	MODERN SPECIES		GBP3 (ENSMFAG00000020136)	ENSMFAG00000041035	ENSMFAG00000005490	KYAT3 (ENSMFAG00000026682) #10	GTF2B (ENSMFAG00000000827) #11	RBMXL1 (ENSMFAG00000049273)	PKN2 (ENSMFAG00000030090) #12	LMO4 (ENSMFAG00000050885) #13	HS2ST1 (ENSMFAG00000041676) #14	SELENOF (ENSMFAG00000064219) #15	SH3GLB1 (ENSMFAG00000061591) #16	ENSMFAG00000044967	ENSMFAG00000045427 #18	CLCA4 (ENSMFAG00000030973) #19	ENSMFAG00000001996 #21	ODF2L (ENSMFAG00000017081) #22	COL24A1 (ENSMFAG00000003536)	ZNHIT6 (ENSMFAG00000001461) #24	CCN1 (ENSMFAG00000000180) #25	DDAH1 (ENSMFAG00000037521) #26	ENSMFAG00000002089	ENSMFAG00000048198	BCL10 (ENSMFAG00000040544) #27	ENSMFAG00000063773	SYDE2 (ENSMFAG00000001689) #29	DNAI3 (ENSMFAG00000007665) #30	MCOLN3 (ENSMFAG00000033413) #31	MCOLN2 (ENSMFAG00000031312) #32	LPAR3 (ENSMFAG00000038099) #33	SSX2IP (ENSMFAG00000036072) #34	CTBS (ENSMFAG00000043668) #35
Rhesus	MODERN SPECIES		GBP3 (ENSMMUG00000000662)	ENSMMUG00000049877	KYAT3 (ENSMMUG00000018795) #10	RBMXL1 (ENSMMUG00000037887)	GTF2B (ENSMMUG00000002794) #11	PKN2 (ENSMMUG00000020588) #12	ENSMMUG00000053179	LMO4 (ENSMMUG00000017383) #13	HS2ST1 (ENSMMUG00000014056) #14	SELENOF (ENSMMUG00000016554) #15	SH3GLB1 (ENSMMUG00000013487) #16	ENSMMUG00000031997	ENSMMUG00000000813 #18	CLCA4 (ENSMMUG00000010306) #19	CLCA1 (ENSMMUG00000006836) #20	ODF2L (ENSMMUG00000001380) #22	COL24A1 (ENSMMUG00000056386)	ZNHIT6 (ENSMMUG00000013203) #24	CCN1 (ENSMMUG00000013197) #25	DDAH1 (ENSMMUG00000014573) #26	ENSMMUG00000063360	BCL10 (ENSMMUG00000005720) #27	C1H1orf52 (ENSMMUG00000010020) #28	ENSMMUG00000053858	SYDE2 (ENSMMUG00000062232) #29	DNAI3 (ENSMMUG00000008932) #30	MCOLN3 (ENSMMUG00000005361) #31	MCOLN2 (ENSMMUG00000015403) #32	LPAR3 (ENSMMUG00000015402) #33	SSX2IP (ENSMMUG00000006203) #34	CTBS (ENSMMUG00000010127) #35
Pig-tailed macaque	MODERN SPECIES	582	ENSMNEG00000001077	KYAT3 (ENSMNEG00000016398) #10	GTF2B (ENSMNEG00000031379) #11	PKN2 (ENSMNEG00000034077) #12	LMO4 (ENSMNEG00000032936) #13	ENSMNEG00000031717	HS2ST1 (ENSMNEG00000038806) #14	SELENOF (ENSMNEG00000023976) #15	SH3GLB1 (ENSMNEG00000039647) #16	ENSMNEG00000038414	ENSMNEG00000011468	ENSMNEG00000028586 #18	CLCA4 (ENSMNEG00000028107) #19	CLCA1 (ENSMNEG00000041265) #20	CLCA2 (ENSMNEG00000019614) #21	ODF2L (ENSMNEG00000043756) #22	COL24A1 (ENSMNEG00000038307)	ZNHIT6 (ENSMNEG00000040791) #24	ENSMNEG00000028396	CCN1 (ENSMNEG00000044316) #25	ENSMNEG00000027123	DDAH1 (ENSMNEG00000044101) #26	BCL10 (ENSMNEG00000041167) #27	ENSMNEG00000038949 #28	SYDE2 (ENSMNEG00000041819) #29	DNAI3 (ENSMNEG00000038794) #30	MCOLN3 (ENSMNEG00000041473) #31	MCOLN2 (ENSMNEG00000031675) #32	LPAR3 (ENSMNEG00000028515) #33	SSX2IP (ENSMNEG00000032502) #34	CTBS (ENSMNEG00000015862) #35
Platyrrhini	ANCESTRAL SPECIES		ENSGT00940000164661	ENSGT00940000164365	ENSGT00940000162297	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00960000186836	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Mas night monkey	MODERN SPECIES	1060	GBP1 (ENSANAG00000028477) #8	KYAT3 (ENSANAG00000021709) #10	GTF2B (ENSANAG00000030485) #11	PKN2 (ENSANAG00000031659) #12	ENSANAG00000036731	ENSANAG00000031694	LMO4 (ENSANAG00000029254) #13	HS2ST1 (ENSANAG00000030866) #14	SELENOF (ENSANAG00000020816) #15	ENSANAG00000027297	SH3GLB1 (ENSANAG00000038367) #16	ENSANAG00000023407 #18	CLCA4 (ENSANAG00000027857) #19	CLCA1 (ENSANAG00000034060) #20	CLCA2 (ENSANAG00000021792) #21	ODF2L (ENSANAG00000031545) #22	ENSANAG00000028955
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000162684	ENSGT00940000164661	ENSGT00940000164365	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Marmoset	MODERN SPECIES	19	GTF2B (ENSCJAG00000007469) #11	ENSCJAG00000079232	PKN2 (ENSCJAG00000007409) #12	ENSCJAG00000070829	ENSCJAG00000078360	LMO4 (ENSCJAG00000041257) #13	HS2ST1 (ENSCJAG00000038902) #14	ENSCJAG00000074244	SELENOF (ENSCJAG00000038701) #15	ENSCJAG00000072388	SH3GLB1 (ENSCJAG00000007335) #16	ENSCJAG00000007329 #18	CLCA4 (ENSCJAG00000007319) #19	CLCA1 (ENSCJAG00000007285) #20	CLCA2 (ENSCJAG00000007251) #21	ODF2L (ENSCJAG00000007184) #22	COL24A1 (ENSCJAG00000007060)	ZNHIT6 (ENSCJAG00000007041) #24	CCN1 (ENSCJAG00000012726) #25	DDAH1 (ENSCJAG00000040455) #26	BCL10 (ENSCJAG00000052966) #27	ENSCJAG00000007022 #28	DNAI3 (ENSCJAG00000006895) #30	SYDE2 (ENSCJAG00000007003) #29	MCOLN2 (ENSCJAG00000006843) #32	LPAR3 (ENSCJAG00000039205) #33	SSX2IP (ENSCJAG00000007456) #34	CTBS (ENSCJAG00000007444) #35	SPATA1 (ENSCJAG00000007432) #36	ENSCJAG00000087345 ##37	RPF1 (ENSCJAG00000007400)
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000164661	ENSGT00940000164365	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000153375.kb.a	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00910000147782	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT00390000013931.a.a	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Capuchin	MODERN SPECIES	261	URI1 (ENSCCAG00000019670)	ZNF536 (ENSCCAG00000030471)	TSHZ3 (ENSCCAG00000028090)	ENSCCAG00000029568	ZNF507 (ENSCCAG00000032775)	ENSCCAG00000035343	HS2ST1 (ENSCCAG00000026104) #14	SELENOF (ENSCCAG00000033446) #15	ENSCCAG00000031456	ENSCCAG00000000976 #18	SH3GLB1 (ENSCCAG00000029842) #16	ENSCCAG00000035676 #18	CLCA4 (ENSCCAG00000027130) #19	CLCA1 (ENSCCAG00000032498) #20	CLCA2 (ENSCCAG00000022983) #21	ODF2L (ENSCCAG00000036639) #22	COL24A1 (ENSCCAG00000026567)	ZNHIT6 (ENSCCAG00000035034) #24	CCN1 (ENSCCAG00000022293) #25	DDAH1 (ENSCCAG00000031737) #26	BCL10 (ENSCCAG00000036016) #27	C1orf52 (ENSCCAG00000022391) #28	ENSCCAG00000032916	SYDE2 (ENSCCAG00000011416) #29	DNAI3 (ENSCCAG00000034917) #30	MCOLN3 (ENSCCAG00000024680) #31	MCOLN2 (ENSCCAG00000021351) #32	LPAR3 (ENSCCAG00000022881) #33	SSX2IP (ENSCCAG00000025619) #34	CTBS (ENSCCAG00000034072) #35	SPATA1 (ENSCCAG00000033239) #36
Bolivian squirrel monkey	MODERN SPECIES	45													CLCA4 (ENSSBOG00000029808) #19	CLCA1 (ENSSBOG00000031532) #20	CLCA2 (ENSSBOG00000034114) #21	ODF2L (ENSSBOG00000019975) #22	COL24A1 (ENSSBOG00000028125)	ZNHIT6 (ENSSBOG00000026850) #24	ENSSBOG00000030704	CCN1 (ENSSBOG00000018139) #25	DDAH1 (ENSSBOG00000029891) #26	ENSSBOG00000021699	BCL10 (ENSSBOG00000032733) #27	C1orf52 (ENSSBOG00000023463) #28	ENSSBOG00000031654	SYDE2 (ENSSBOG00000032922) #29	DNAI3 (ENSSBOG00000020387) #30	MCOLN3 (ENSSBOG00000031702) #31	MCOLN2 (ENSSBOG00000019614) #32	LPAR3 (ENSSBOG00000022469) #33	SSX2IP (ENSSBOG00000030187) #34
Tarsier	MODERN SPECIES	4430														CLCA1 (ENSTSYG00000009238) #20	CLCA2 (ENSTSYG00000010230) #21	ODF2L (ENSTSYG00000011449) #22
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000164661	ENSGT00940000164365	ENSGT00940000162297	ENSGT00940000156840.b.n #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000162297	ENSGT00940000156840.b.n #8	ENSGT00940000156840.b.m.a #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Lemuriformes_a	ANCESTRAL SPECIES	39	ENSGT00940000162297	ENSGT00940000156840.b.n #8	ENSGT00940000156840.b.m.a #8	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Greater bamboo lemur	MODERN SPECIES	537						LMO4 (ENSPSMG00000021488) #13	HS2ST1 (ENSPSMG00000021496) #14	ENSPSMG00000021508	SELENOF (ENSPSMG00000021549) #15	SH3GLB1 (ENSPSMG00000021643) #16	ENSPSMG00000021689 #18	ENSPSMG00000021691 #18	CLCA4 (ENSPSMG00000021703) #19	CLCA1 (ENSPSMG00000021724) #20	CLCA2 (ENSPSMG00000021729) #21	ODF2L (ENSPSMG00000021792) #22	COL24A1 (ENSPSMG00000021850)	ZNHIT6 (ENSPSMG00000021864) #24	ENSPSMG00000021872	CCN1 (ENSPSMG00000021878) #25	ENSPSMG00000021882	DDAH1 (ENSPSMG00000021897) #26	BCL10 (ENSPSMG00000021929) #27	C1orf52 (ENSPSMG00000021942) #28	SYDE2 (ENSPSMG00000021951) #29	DNAI3 (ENSPSMG00000021999) #30	MCOLN3 (ENSPSMG00000022026) #31	MCOLN2 (ENSPSMG00000022039) #32	LPAR3 (ENSPSMG00000022047) #33	SSX2IP (ENSPSMG00000022107) #34	CTBS (ENSPSMG00000022172) #35
Mouse lemur	MODERN SPECIES	11	ENSMICG00000046890	ENSMICG00000042494	GBP1 (ENSMICG00000014351) #8	KYAT3 (ENSMICG00000014713) #10	GTF2B (ENSMICG00000014701) #11	PKN2 (ENSMICG00000035571) #12	LMO4 (ENSMICG00000043046) #13	HS2ST1 (ENSMICG00000006302) #14	SELENOF (ENSMICG00000015940) #15	ENSMICG00000037323	SH3GLB1 (ENSMICG00000015928) #16	ENSMICG00000034178 #18	CLCA4 (ENSMICG00000015889) #19	ENSMICG00000031237	CLCA1 (ENSMICG00000015876) #20	ODF2L (ENSMICG00000015848) #22	COL24A1 (ENSMICG00000015782)	ZNHIT6 (ENSMICG00000015775) #24	CCN1 (ENSMICG00000015764) #25	ENSMICG00000033242	DDAH1 (ENSMICG00000015756) #26	ENSMICG00000029851	BCL10 (ENSMICG00000046947) #27	C1orf52 (ENSMICG00000015748) #28	SYDE2 (ENSMICG00000036942) #29	DNAI3 (ENSMICG00000014988) #30	MCOLN3 (ENSMICG00000014973) #31	MCOLN2 (ENSMICG00000014951) #32	LPAR3 (ENSMICG00000034976) #33	SSX2IP (ENSMICG00000031693) #34	CTBS (ENSMICG00000047868) #35
Bushbaby	MODERN SPECIES	125	ENSOGAG00000031422 #8	ENSOGAG00000004493 #8	GBP7 (ENSOGAG00000002535)	ENSOGAG00000005755 #8	KYAT3 (ENSOGAG00000014512) #10	GTF2B (ENSOGAG00000005753) #11	PKN2 (ENSOGAG00000005748) #12	ENSOGAG00000030868	LMO4 (ENSOGAG00000002297) #13	HS2ST1 (ENSOGAG00000026296) #14	SH3GLB1 (ENSOGAG00000009494) #16	ENSOGAG00000014165 #18	CLCA4 (ENSOGAG00000014158) #19	CLCA1 (ENSOGAG00000014152) #20	CLCA2 (ENSOGAG00000014147) #21	ODF2L (ENSOGAG00000014145) #22	COL24A1 (ENSOGAG00000010965)	ZNHIT6 (ENSOGAG00000010963) #24	CCN1 (ENSOGAG00000010959) #25	ENSOGAG00000033406	DDAH1 (ENSOGAG00000009978) #26	BCL10 (ENSOGAG00000009976) #27	C1orf52 (ENSOGAG00000008908) #28	SYDE2 (ENSOGAG00000008376) #29	DNAI3 (ENSOGAG00000007725) #30	MCOLN3 (ENSOGAG00000007722) #31	MCOLN2 (ENSOGAG00000007718) #32	LPAR3 (ENSOGAG00000016851) #33	SSX2IP (ENSOGAG00000004650) #34	CTBS (ENSOGAG00000004649) #35	SPATA1 (ENSOGAG00000004646) #36
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00530000063497.b #22
Hedgehog	MODERN SPECIES	2247																ODF2L (ENSEEUG00000013557) #22
Common shrew	MODERN SPECIES	1626																ODF2L (ENSSARG00000007155) #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000156840.b #8	ENSGT00940000162370	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000162297	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Suina	ANCESTRAL SPECIES	32	ENSGT00940000154265	ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000162297	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31
Chacoan peccary	MODERN SPECIES	216	ENSCWAG00000014252	ENSCWAG00000014293	ENSCWAG00000014390	GBP1 (ENSCWAG00000014426) #8	KYAT3 (ENSCWAG00000014490) #10	GTF2B (ENSCWAG00000014637) #11	PKN2 (ENSCWAG00000014683) #12	ENSCWAG00000014846 #13	HS2ST1 (ENSCWAG00000014885) #14	SELENOF (ENSCWAG00000014949) #15	SH3GLB1 (ENSCWAG00000015014) #16	ENSCWAG00000015195 #19	ENSCWAG00000015913 #19	CLCA1 (ENSCWAG00000016019) #20	CLCA2 (ENSCWAG00000016125) #21	ODF2L (ENSCWAG00000016227) #22	COL24A1 (ENSCWAG00000016291)	ZNHIT6 (ENSCWAG00000016707) #24	CCN1 (ENSCWAG00000016845) #25	DDAH1 (ENSCWAG00000016873) #26	BCL10 (ENSCWAG00000016929) #27	C1orf52 (ENSCWAG00000016957) #28	SYDE2 (ENSCWAG00000016990) #29	DNAI3 (ENSCWAG00000017052) #30	PCDH20 (ENSCWAG00000017337)	TDRD3 (ENSCWAG00000017371)	ENSCWAG00000017495	DIAPH3 (ENSCWAG00000017632)	ENSCWAG00000019391	ENSCWAG00000019419	PCDH17 (ENSCWAG00000019432)
Pig	MODERN SPECIES	12	ENSSSCG00000063342	ENSSSCG00000058709	GBP2 (ENSSSCG00000006923)	GBP1 (ENSSSCG00000024973) #8	KYAT3 (ENSSSCG00000006925) #10	GTF2B (ENSSSCG00000006926) #11	PKN2 (ENSSSCG00000006927) #12	ENSSSCG00000047605 #13	HS2ST1 (ENSSSCG00000022032) #14	SELENOF (ENSSSCG00000030125) #15	SH3GLB1 (ENSSSCG00000006930) #16	ENSSSCG00000059930 #19	ENSSSCG00000006932 #19	CLCA1 (ENSSSCG00000006933) #20	CLCA2 (ENSSSCG00000006935) #21	ODF2L (ENSSSCG00000006936) #22	COL24A1 (ENSSSCG00000031738)	ZNHIT6 (ENSSSCG00000006939) #24	CCN1 (ENSSSCG00000006940) #25	ENSSSCG00000056532	DDAH1 (ENSSSCG00000040735) #26	BCL10 (ENSSSCG00000025691) #27	C1orf52 (ENSSSCG00000026772) #28	SYDE2 (ENSSSCG00000006947) #29	DNAI3 (ENSSSCG00000006950) #30	MCOLN3 (ENSSSCG00000023745) #31
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000162297	ENSGT00940000162370	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000162297	ENSGT00940000162370	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Cetacea	ANCESTRAL SPECIES		ENSGT00940000162370	ENSGT00940000164799	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00950000186157	ENSGT00390000003298 #36
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00950000186157	ENSGT00390000003298 #36
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00500000046198	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000010089.e.a	ENSGT01100000263525.a.b.b.c.b ##37
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000154276.jb.a.c.a.b	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT01100000263605.b.a	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT01100000263525.a.b.b.c.b ##37
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000154276.jb.a.c.a.b	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT01100000263605.b.a	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000010089.e.a
Beluga whale	MODERN SPECIES	74	KYAT3 (ENSDLEG00000017482) #10	GTF2B (ENSDLEG00000017460) #11	PKN2 (ENSDLEG00000017326) #12	ENSDLEG00000017300	ENSDLEG00000017289	LMO4 (ENSDLEG00000017266) #13	HS2ST1 (ENSDLEG00000017249) #14	ENSDLEG00000017239	SELENOF (ENSDLEG00000017224) #15	SH3GLB1 (ENSDLEG00000017190) #16	ENSDLEG00000017178 #18	ENSDLEG00000017169	CLCA4 (ENSDLEG00000017123) #19	CLCA1 (ENSDLEG00000016981) #20	CLCA2 (ENSDLEG00000016914) #21	ODF2L (ENSDLEG00000016888) #22	ENSDLEG00000016875	ENSDLEG00000016857	ZNHIT6 (ENSDLEG00000016847) #24	CYR61 (ENSDLEG00000016833) #25	DDAH1 (ENSDLEG00000016798) #26	BCL10 (ENSDLEG00000016793) #27	CUNH1orf52 (ENSDLEG00000016784) #28	SYDE2 (ENSDLEG00000016765) #29	DNAI3 (ENSDLEG00000016672) #30	MCOLN3 (ENSDLEG00000016634) #31	MCOLN2 (ENSDLEG00000016543) #32	LPAR3 (ENSDLEG00000016529) #33	SSX2IP (ENSDLEG00000016495) #34	ENSDLEG00000016476	ENSDLEG00000016469
Narwhal	MODERN SPECIES	304	ENSMMNG00015005832	GBP1 (ENSMMNG00015005860) #8	KYAT3 (ENSMMNG00015005883) #10	GTF2B (ENSMMNG00015005908) #11	PKN2 (ENSMMNG00015005946) #12	ENSMMNG00015006010	LMO4 (ENSMMNG00015006030) #13	HS2ST1 (ENSMMNG00015006048) #14	SELENOF (ENSMMNG00015006069) #15	SH3GLB1 (ENSMMNG00015006123) #16	ENSMMNG00015006184 #18	ENSMMNG00015006203	CLCA4 (ENSMMNG00015006219) #19	CLCA1 (ENSMMNG00015006324) #20	CLCA2 (ENSMMNG00015006483) #21	ODF2L (ENSMMNG00015006542) #22	ENSMMNG00015006593	COL24A1 (ENSMMNG00015006630)	ENSMMNG00015006664	ZNHIT6 (ENSMMNG00015006688) #24	CCN1 (ENSMMNG00015006718) #25	ENSMMNG00015006737	ENSMMNG00015006746	DDAH1 (ENSMMNG00015006769) #26	BCL10 (ENSMMNG00015006803) #27	C1orf52 (ENSMMNG00015006824) #28	SYDE2 (ENSMMNG00015006844) #29	DNAI3 (ENSMMNG00015006897) #30	MCOLN3 (ENSMMNG00015006977) #31	MCOLN2 (ENSMMNG00015007034) #32	LPAR3 (ENSMMNG00015007073) #33
Vaquita	MODERN SPECIES		ENSPSNG00000013098	GBP1 (ENSPSNG00000013042) #8	KYAT3 (ENSPSNG00000012923) #10	GTF2B (ENSPSNG00000012867) #11	PKN2 (ENSPSNG00000012773) #12	ENSPSNG00000012666 #13	HS2ST1 (ENSPSNG00000012610) #14	SELENOF (ENSPSNG00000012535) #15	SH3GLB1 (ENSPSNG00000012379) #16	ENSPSNG00000012254	ENSPSNG00000012179 #18	ENSPSNG00000012108	CLCA4 (ENSPSNG00000011942) #19	CLCA1 (ENSPSNG00000011200) #20	CLCA2 (ENSPSNG00000010949) #21	ODF2L (ENSPSNG00000010772) #22	ENSPSNG00000010684	ENSPSNG00000010645	COL24A1 (ENSPSNG00000010075)	ZNHIT6 (ENSPSNG00000009894) #24	CCN1 (ENSPSNG00000009783) #25	DDAH1 (ENSPSNG00000004030) #26	BCL10 (ENSPSNG00000004004) #27	C1orf52 (ENSPSNG00000003984) #28	SYDE2 (ENSPSNG00000003962) #29	DNAI3 (ENSPSNG00000003943) #30	MCOLN3 (ENSPSNG00000003890) #31	MCOLN2 (ENSPSNG00000003843) #32	LPAR3 (ENSPSNG00000003830) #33	SSX2IP (ENSPSNG00000003809) #34	GNG5 (ENSPSNG00000003794) ##37
Dolphin	MODERN SPECIES	3725														CLCA1 (ENSTTRG00000000003) #20	CLCA2 (ENSTTRG00000000004) #21	ODF2L (ENSTTRG00000000005) #22
Sperm whale	MODERN SPECIES	15	LRRC8B (ENSPCTG00005008618)	GBP6 (ENSPCTG00005008669)	GBP1 (ENSPCTG00005008720) #8	KYAT3 (ENSPCTG00005008865) #10	GTF2B (ENSPCTG00005009016) #11	PKN2 (ENSPCTG00005009071) #12	LMO4 (ENSPCTG00005009288) #13	HS2ST1 (ENSPCTG00005009338) #14	SELENOF (ENSPCTG00005009387) #15	SH3GLB1 (ENSPCTG00005009480) #16	ENSPCTG00005009928 #18	ENSPCTG00005009991 #18	CLCA4 (ENSPCTG00005010077) #19	CLCA1 (ENSPCTG00005010226) #20	CLCA2 (ENSPCTG00005010389) #21	ODF2L (ENSPCTG00005010473) #22	COL24A1 (ENSPCTG00005010594)	ENSPCTG00005010695	ZNHIT6 (ENSPCTG00005010735) #24	CCN1 (ENSPCTG00005010887) #25	BCL10 (ENSPCTG00005010972) #27	C4H1orf52 (ENSPCTG00005011208) #28	SYDE2 (ENSPCTG00005011255) #29	DNAI3 (ENSPCTG00005011337) #30	MCOLN3 (ENSPCTG00005011843) #31	MCOLN2 (ENSPCTG00005012138) #32	LPAR3 (ENSPCTG00005012306) #33	SSX2IP (ENSPCTG00005012325) #34	ENSPCTG00005012379	ENSPCTG00005012400	ENSPCTG00005012437 #36
Blue whale	MODERN SPECIES		GBP3 (ENSBMSG00010011770)	KYAT3 (ENSBMSG00010011753) #10	GTF2B (ENSBMSG00010011733) #11	PKN2 (ENSBMSG00010011716) #12	LMO4 (ENSBMSG00010011694) #13	HS2ST1 (ENSBMSG00010011683) #14	SELENOF (ENSBMSG00010011670) #15	SH3GLB1 (ENSBMSG00010011657) #16	ENSBMSG00010011649	ENSBMSG00010011641 #18	ENSBMSG00010011631 #18	ENSBMSG00010011618 #19	ENSBMSG00010011578 #19	CLCA1 (ENSBMSG00010011556) #20	CLCA2 (ENSBMSG00010011495) #21	ODF2L (ENSBMSG00010011443) #22	ENSBMSG00010011419	COL24A1 (ENSBMSG00010011347)	ZNHIT6 (ENSBMSG00010011279) #24	CCN1 (ENSBMSG00010011251) #25	ENSBMSG00010011239	DDAH1 (ENSBMSG00010011208) #26	ENSBMSG00010011187 #27	C1orf52 (ENSBMSG00010011167) #28	SYDE2 (ENSBMSG00010011151) #29	DNAI3 (ENSBMSG00010011066) #30	MCOLN3 (ENSBMSG00010011002) #31	MCOLN2 (ENSBMSG00010010954) #32	ENSBMSG00010010924	LPAR3 (ENSBMSG00010010913) #33	SSX2IP (ENSBMSG00010010888) #34
Pecora	ANCESTRAL SPECIES	2	ENSGT00940000162370.m.a	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00940000153661.a.a.c.b.a.b	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.a #18	ENSGT00940000157555.b #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT01000000215412	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Percora_a	ANCESTRAL SPECIES	1	ENSGT00940000162370.m.a	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00940000153661.a.a.c.b.a.b	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.a #18	ENSGT00940000157555.b #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT01000000215412	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Bovidae	ANCESTRAL SPECIES	1	ENSGT00940000162370.m.a	ENSGT00940000156840.b.g.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00940000153661.a.a.c.b.a.b	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.a #18	ENSGT00940000157555.b #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT01000000215412	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Bovinae	ANCESTRAL SPECIES	1	ENSGT00940000162297	ENSGT00940000162370.m.a.a	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.a #18	ENSGT00940000157555.b #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT01000000215412	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Bos	ANCESTRAL SPECIES		ENSGT00940000162370.m.a.b.b	ENSGT00940000156840.b.g.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000155046.hb.b	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.a #18	ENSGT00940000157555.b #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT01000000215412	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Bos_b	ANCESTRAL SPECIES	1	ENSGT00940000156233	ENSGT00940000154549.a	ENSGT00530000063861.b.b	ENSGT00550000075011	ENSGT00550000074822	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.b.b.b.b.a.b.a.b.a.a	ENSGT00940000157555.a #18	ENSGT00940000157555.b #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT01000000215412	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Hybrid Bos Indicus	MODERN SPECIES	22	ENSBIXG00005030485	GTF2B (ENSBIXG00005030494) #11	PKN2 (ENSBIXG00005030523) #12	ENSBIXG00005030571	ENSBIXG00005030620 #13	HS2ST1 (ENSBIXG00005001561) #14	ENSBIXG00005005268 #15	SH3GLB1 (ENSBIXG00005029220) #16	ENSBIXG00005001721	ENSBIXG00005001767 #18	ENSBIXG00005029153 #18	CLCA4 (ENSBIXG00005029144) #19	CLCA1 (ENSBIXG00005005168) #20	CLCA2 (ENSBIXG00005029083) #21	ENSBIXG00005001995	ODF2L (ENSBIXG00005005132) #22	COL24A1 (ENSBIXG00005028988)	ZNHIT6 (ENSBIXG00005002133) #24	CCN1 (ENSBIXG00005028896) #25	ENSBIXG00005002260	DDAH1 (ENSBIXG00005002285) #26	BCL10 (ENSBIXG00005028824) #27	C1orf52 (ENSBIXG00005006646) #28	SYDE2 (ENSBIXG00005028777) #29	DNAI3 (ENSBIXG00005028759) #30	ENSBIXG00005028687	MCOLN3 (ENSBIXG00005028662) #31	MCOLN2 (ENSBIXG00005028583) #32	LPAR3 (ENSBIXG00005028548) #33	SSX2IP (ENSBIXG00005028521) #34	CTBS (ENSBIXG00005028483) #35
Cow	MODERN SPECIES	22	ENSBTAG00000017670 #8	KYAT3 (ENSBTAG00000000505) #10	GTF2B (ENSBTAG00000000504) #11	PKN2 (ENSBTAG00000021900) #12	ENSBTAG00000001873	LMO4 (ENSBTAG00000000305) #13	HS2ST1 (ENSBTAG00000017595) #14	SELENOF (ENSBTAG00000052268) #15	SH3GLB1 (ENSBTAG00000031171) #16	ENSBTAG00000051311	ENSBTAG00000021501 #18	CLCA3 (ENSBTAG00000016712) #18	CLCA4 (ENSBTAG00000017357) #19	CLCA1 (ENSBTAG00000008161) #20	CLCA2 (ENSBTAG00000038215) #21	ODF2L (ENSBTAG00000012907) #22	ENSBTAG00000048312	ZNHIT6 (ENSBTAG00000021051) #24	CCN1 (ENSBTAG00000009844) #25	DDAH1 (ENSBTAG00000034776) #26	BCL10 (ENSBTAG00000013851) #27	C3H1orf52 (ENSBTAG00000016326) #28	SYDE2 (ENSBTAG00000003444) #29	DNAI3 (ENSBTAG00000013778) #30	MCOLN3 (ENSBTAG00000016982) #31	MCOLN2 (ENSBTAG00000046773) #32	LPAR3 (ENSBTAG00000003791) #33	SSX2IP (ENSBTAG00000018942) #34	CTBS (ENSBTAG00000005782) #35	SPATA1 (ENSBTAG00000020010) #36	GNG5 (ENSBTAG00000008122) ##37
Bos_a	ANCESTRAL SPECIES	1	ENSGT01030000234574.A.b.a.b	ENSGT00940000156233	ENSGT00940000154549.a	ENSGT00530000063861.b.b	ENSGT00550000075011	ENSGT00550000074822	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.a #18	ENSGT00940000157555.b #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT01000000215412	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Domestic yak	MODERN SPECIES	22	ENSBGRG00000003474	ENSBGRG00000003489 #8	KYAT3 (ENSBGRG00000003525) #10	ENSBGRG00000003582 #11	PKN2 (ENSBGRG00000003620) #12	ENSBGRG00000003742	ENSBGRG00000003784 #13	HS2ST1 (ENSBGRG00000003851) #14	SELENOF (ENSBGRG00000004000) #15	SH3GLB1 (ENSBGRG00000004071) #16	ENSBGRG00000004351 #18	CLCA4 (ENSBGRG00000004774) #19	CLCA1 (ENSBGRG00000006534) #20	CLCA2 (ENSBGRG00000006661) #21	ENSBGRG00000006706	ODF2L (ENSBGRG00000006729) #22	COL24A1 (ENSBGRG00000006871)	ENSBGRG00000000235	ZNHIT6 (ENSBGRG00000000263) #24	CCN1 (ENSBGRG00000000313) #25	ENSBGRG00000000337	DDAH1 (ENSBGRG00000000347) #26	BCL10 (ENSBGRG00000000384) #27	C1orf52 (ENSBGRG00000000411) #28	SYDE2 (ENSBGRG00000000456) #29	DNAI3 (ENSBGRG00000000494) #30	MCOLN3 (ENSBGRG00000000709) #31	MCOLN2 (ENSBGRG00000000755) #32	ENSBGRG00000000797	LPAR3 (ENSBGRG00000000803) #33	SSX2IP (ENSBGRG00000000833) #34
Wild yak	MODERN SPECIES	151	ENSBMUG00000017180	ENSBMUG00000017233 #8	ENSBMUG00000017266 #10	GTF2B (ENSBMUG00000017282) #11	PKN2 (ENSBMUG00000017320) #12	ENSBMUG00000017344	ENSBMUG00000017370 #13	HS2ST1 (ENSBMUG00000017400) #14	SELENOF (ENSBMUG00000017480) #15	SH3GLB1 (ENSBMUG00000017608) #16	ENSBMUG00000017730 #18	ENSBMUG00000017762 #18	CLCA4 (ENSBMUG00000017782) #19	CLCA1 (ENSBMUG00000017812) #20	CLCA2 (ENSBMUG00000017843) #21	ODF2L (ENSBMUG00000017919) #22	COL24A1 (ENSBMUG00000017985)	ENSBMUG00000018023	ZNHIT6 (ENSBMUG00000018058) #24	CCN1 (ENSBMUG00000018082) #25	DDAH1 (ENSBMUG00000018146) #26	BCL10 (ENSBMUG00000018176) #27	C1orf52 (ENSBMUG00000018196) #28	SYDE2 (ENSBMUG00000018219) #29	DNAI3 (ENSBMUG00000018237) #30	MCOLN3 (ENSBMUG00000018289) #31
American bison	MODERN SPECIES	3325	ENSBBBG00000022656	ENSBBBG00000000440	GBP3 (ENSBBBG00000000373)	KYAT3 (ENSBBBG00000000333) #10	GTF2B (ENSBBBG00000006072) #11	PKN2 (ENSBBBG00000023252) #12	ENSBBBG00000023310 #13	HS2ST1 (ENSBBBG00000006101) #14	SELENOF (ENSBBBG00000008413) #15	SH3GLB1 (ENSBBBG00000007287) #16	ENSBBBG00000023469 #18	ENSBBBG00000008313 #18	CLCA4 (ENSBBBG00000023614) #19	CLCA1 (ENSBBBG00000006178) #20	CLCA2 (ENSBBBG00000023667) #21	ODF2L (ENSBBBG00000023750) #22	COL24A1 (ENSBBBG00000007290)	ZNHIT6 (ENSBBBG00000006216) #24	CCN1 (ENSBBBG00000023910) #25	ENSBBBG00000023925	DDAH1 (ENSBBBG00000023962) #26	BCL10 (ENSBBBG00000023973) #27	C1orf52 (ENSBBBG00000023979) #28	SYDE2 (ENSBBBG00000008975) #29	DNAI3 (ENSBBBG00000024063) #30	MCOLN3 (ENSBBBG00000024117) #31	MCOLN2 (ENSBBBG00000024164) #32	LPAR3 (ENSBBBG00000024176) #33	SSX2IP (ENSBBBG00000008990) #34	CTBS (ENSBBBG00000024262) #35	SPATA1 (ENSBBBG00000024290) #36
Caprinae	ANCESTRAL SPECIES	2	ENSGT00940000162370.m.a	ENSGT00940000156840.b.g.b #8	ENSGT00940000155827 #10	ENSGT00390000006671.o #11	ENSGT00940000154339 #12	ENSGT00940000157730.g #13	ENSGT00940000153661.a.a.c.b.a.b	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555.a #18	ENSGT00940000157555.b #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT01000000215412	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020007112	GBP5 (ENSOARG00020006923) #8	KYAT3 (ENSOARG00020006497) #10	ENSOARG00020006445 #11	PKN2 (ENSOARG00020006149) #12	LMO4 (ENSOARG00020006088) #13	ENSOARG00020006050	HS2ST1 (ENSOARG00020005954) #14	SELENOF (ENSOARG00020005902) #15	SH3GLB1 (ENSOARG00020005783) #16	ENSOARG00020003537 #18	ENSOARG00020002384 #18	CLCA4 (ENSOARG00020002227) #19	CLCA1 (ENSOARG00020002201) #20	CLCA2 (ENSOARG00020002169) #21	ODF2L (ENSOARG00020002095) #22	COL24A1 (ENSOARG00020002041)	CCN1 (ENSOARG00020001971) #25	DDAH1 (ENSOARG00020001916) #26	ENSOARG00020001899	BCL10 (ENSOARG00020001886) #27	C1orf52 (ENSOARG00020001875) #28	SYDE2 (ENSOARG00020001859) #29	DNAI3 (ENSOARG00020001533) #30	ENSOARG00020001462	MCOLN3 (ENSOARG00020001362) #31	MCOLN2 (ENSOARG00020001324) #32	LPAR3 (ENSOARG00020001315) #33	SSX2IP (ENSOARG00020001297) #34	CTBS (ENSOARG00020001255) #35	SPATA1 (ENSOARG00020001225) #36
Goat	MODERN SPECIES	22	KYAT3 (ENSCHIG00000020038) #10	GTF2B (ENSCHIG00000026058) #11	PKN2 (ENSCHIG00000009130) #12	ENSCHIG00000010824	ENSCHIG00000018929	ENSCHIG00000027226 #13	HS2ST1 (ENSCHIG00000026325) #14	SELENOF (ENSCHIG00000010920) #15	ENSCHIG00000018965	SH3GLB1 (ENSCHIG00000026662) #16	ENSCHIG00000007867 #18	ENSCHIG00000002248 #18	CLCA4 (ENSCHIG00000021877) #19	CLCA1 (ENSCHIG00000011719) #20	CLCA2 (ENSCHIG00000027130) #21	ODF2L (ENSCHIG00000025854) #22	ENSCHIG00000017228	COL24A1 (ENSCHIG00000020640)	ZNHIT6 (ENSCHIG00000020100) #24	CCN1 (ENSCHIG00000027269) #25	ENSCHIG00000011990	DDAH1 (ENSCHIG00000024596) #26	BCL10 (ENSCHIG00000011561) #27	ENSCHIG00000026751 #28	SYDE2 (ENSCHIG00000014781) #29	DNAI3 (ENSCHIG00000017079) #30	MCOLN3 (ENSCHIG00000018773) #31	MCOLN2 (ENSCHIG00000008729) #32	LPAR3 (ENSCHIG00000017316) #33	SSX2IP (ENSCHIG00000025764) #34	CTBS (ENSCHIG00000022826) #35
Siberian musk deer	MODERN SPECIES	339	ENSMMSG00000004376	ENSMMSG00000004395 #8	KYAT3 (ENSMMSG00000004410) #10	ENSMMSG00000004441 #11	PKN2 (ENSMMSG00000004478) #12	ENSMMSG00000004549	LMO4 (ENSMMSG00000004595) #13	HS2ST1 (ENSMMSG00000004654) #14	SELENOF (ENSMMSG00000004702) #15	SH3GLB1 (ENSMMSG00000004787) #16	ENSMMSG00000005173 #18	ENSMMSG00000005817 #18	CLCA4 (ENSMMSG00000006195) #19	CLCA1 (ENSMMSG00000006239) #20	CLCA2 (ENSMMSG00000006290) #21	ODF2L (ENSMMSG00000006331) #22	COL24A1 (ENSMMSG00000006437)	ZNHIT6 (ENSMMSG00000006731) #24	CCN1 (ENSMMSG00000006870) #25	ENSMMSG00000006904	DDAH1 (ENSMMSG00000006918) #26	BCL10 (ENSMMSG00000006944) #27	C1orf52 (ENSMMSG00000006971) #28	SYDE2 (ENSMMSG00000006993) #29	DNAI3 (ENSMMSG00000007042) #30	MCOLN3 (ENSMMSG00000007252) #31	MCOLN2 (ENSMMSG00000007452) #32	LPAR3 (ENSMMSG00000007558) #33	SSX2IP (ENSMMSG00000007576) #34	CTBS (ENSMMSG00000007643) #35	ENSMMSG00000007667 #36
Yarkand deer	MODERN SPECIES	12	PKN2 (ENSCHYG00000015994) #12	ENSCHYG00000016361	ENSCHYG00000016385 #13	ENSCHYG00000016481	HS2ST1 (ENSCHYG00000016521) #14	ENSCHYG00000016678 #15	ENSCHYG00000016843	SH3GLB1 (ENSCHYG00000016905) #16	ENSCHYG00000017416	ENSCHYG00000017521 #18	ENSCHYG00000017942 #18	CLCA4 (ENSCHYG00000017997) #19	ENSCHYG00000018086	CLCA1 (ENSCHYG00000018130) #20	CLCA2 (ENSCHYG00000018274) #21	ODF2L (ENSCHYG00000018506) #22	COL24A1 (ENSCHYG00000019031)	ZNHIT6 (ENSCHYG00000019277) #24	CCN1 (ENSCHYG00000019490) #25	ENSCHYG00000019543	ENSCHYG00000019567	DDAH1 (ENSCHYG00000019587) #26	BCL10 (ENSCHYG00000019711) #27	C1orf52 (ENSCHYG00000019772) #28	SYDE2 (ENSCHYG00000019844) #29	DNAI3 (ENSCHYG00000019958) #30	MCOLN3 (ENSCHYG00000021236) #31	MCOLN2 (ENSCHYG00000021424) #32	LPAR3 (ENSCHYG00000021602) #33	ENSCHYG00000021637 #34	CTBS (ENSCHYG00000021813) #35
Camelidae	ANCESTRAL SPECIES	11				ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36	ENSGT01100000263525.a.b.b.d #37
Alpaca	MODERN SPECIES	1965									HS2ST1 (ENSVPAG00000011776) #14	SELENOF (ENSVPAG00000011775) #15	SH3GLB1 (ENSVPAG00000011773) #16	ENSVPAG00000011772 #18	CLCA4 (ENSVPAG00000011770) #19	CLCA1 (ENSVPAG00000011769) #20	CLCA2 (ENSVPAG00000011768) #21	ODF2L (ENSVPAG00000011767) #22	COL24A1 (ENSVPAG00000011762)
Arabian camel	MODERN SPECIES	4		ENSCDRG00005015008	ENSCDRG00005014950	ENSCDRG00005014657	KYAT3 (ENSCDRG00005014467) #10	GTF2B (ENSCDRG00005014409) #11	PKN2 (ENSCDRG00005014192) #12	LMO4 (ENSCDRG00005014134) #13	HS2ST1 (ENSCDRG00005014055) #14	SELENOF (ENSCDRG00005013974) #15	SH3GLB1 (ENSCDRG00005013701) #16	ENSCDRG00005013259 #18	CLCA4 (ENSCDRG00005013128) #19	CLCA1 (ENSCDRG00005012990) #20	CLCA2 (ENSCDRG00005012881) #21	ODF2L (ENSCDRG00005012713) #22	COL24A1 (ENSCDRG00005012526)	ZNHIT6 (ENSCDRG00005012303) #24	CCN1 (ENSCDRG00005012224) #25	DDAH1 (ENSCDRG00005011995) #26	BCL10 (ENSCDRG00005011941) #27	C1orf52 (ENSCDRG00005011873) #28	SYDE2 (ENSCDRG00005011826) #29	DNAI3 (ENSCDRG00005011768) #30	MCOLN3 (ENSCDRG00005011428) #31	MCOLN2 (ENSCDRG00005011158) #32	LPAR3 (ENSCDRG00005011117) #33	SSX2IP (ENSCDRG00005011054) #34	CTBS (ENSCDRG00005011010) #35	SPATA1 (ENSCDRG00005010904) #36	GNG5 (ENSCDRG00005010830) ##37
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000164661	ENSGT00940000156840.b #8	ENSGT00940000162370	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Carnivora	ANCESTRAL SPECIES	1	ENSGT00940000154265	ENSGT00940000162684	ENSGT00940000164661	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Caniformia	ANCESTRAL SPECIES	2	ENSGT00940000154265	ENSGT00940000162684	ENSGT00940000164661	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00940000162370.h	ENSGT00940000154265	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00390000009268.y.a	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Ursidae	ANCESTRAL SPECIES	32	ENSGT00940000162370.g	ENSGT00940000154265	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339.`b #12	ENSGT00940000157730 #13	ENSGT00390000009268.y.a	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b.i #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Ursus	ANCESTRAL SPECIES	139	ENSGT00940000162684	ENSGT00940000162370.h	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339.`b #12	ENSGT00940000157730 #13	ENSGT00390000009268.y.a	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b.i #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36	ENSGT01100000263525.a.b.b.d #37
American black bear	MODERN SPECIES	1616												ENSUAMG00000012085 #18	CLCA4 (ENSUAMG00000012079) #19	CLCA1 (ENSUAMG00000012003) #20	CLCA2 (ENSUAMG00000011967) #21	ODF2L (ENSUAMG00000011950) #22
Polar bear	MODERN SPECIES	170	GBP5 (ENSUMAG00000001557)	GBP1 (ENSUMAG00000001567) #8	KYAT3 (ENSUMAG00000001577) #10	GTF2B (ENSUMAG00000001587) #11	PKN2 (ENSUMAG00000001596) #12	ENSUMAG00000001612	LMO4 (ENSUMAG00000001651) #13	ENSUMAG00000001654	HS2ST1 (ENSUMAG00000001671) #14	SELENOF (ENSUMAG00000001679) #15	SH3GLB1 (ENSUMAG00000001715) #16	ENSUMAG00000001751 #18	CLCA4 (ENSUMAG00000001934) #19	CLCA1 (ENSUMAG00000002319) #20	CLCA2 (ENSUMAG00000002415) #21	ODF2L (ENSUMAG00000002451) #22	ENSUMAG00000002474	ZNHIT6 (ENSUMAG00000002478) #24	CCN1 (ENSUMAG00000002488) #25	DDAH1 (ENSUMAG00000002499) #26	BCL10 (ENSUMAG00000002502) #27	C1orf52 (ENSUMAG00000002504) #28	SYDE2 (ENSUMAG00000002509) #29	DNAI3 (ENSUMAG00000002541) #30	MCOLN3 (ENSUMAG00000002560) #31	MCOLN2 (ENSUMAG00000002572) #32	LPAR3 (ENSUMAG00000002579) #33	SSX2IP (ENSUMAG00000002601) #34	CTBS (ENSUMAG00000002608) #35	SPATA1 (ENSUMAG00000002623) #36	ENSUMAG00000002631 #37
Giant Panda	MODERN SPECIES	11	ENSAMEG00000009306	GBP1 (ENSAMEG00000016105) #8	KYAT3 (ENSAMEG00000016142) #10	GTF2B (ENSAMEG00000016176) #11	PKN2 (ENSAMEG00000016188) #12	ENSAMEG00000016734	LMO4 (ENSAMEG00000016200) #13	ENSAMEG00000020192	HS2ST1 (ENSAMEG00000016204) #14	SELENOF (ENSAMEG00000027639) #15	SH3GLB1 (ENSAMEG00000016222) #16	ENSAMEG00000015592 #18	CLCA4 (ENSAMEG00000017158) #19	CLCA1 (ENSAMEG00000017170) #20	CLCA2 (ENSAMEG00000017197) #21	ODF2L (ENSAMEG00000017198) #22	COL24A1 (ENSAMEG00000017218)	ZNHIT6 (ENSAMEG00000017224) #24	CCN1 (ENSAMEG00000017235) #25	ENSAMEG00000023476	DDAH1 (ENSAMEG00000017246) #26	BCL10 (ENSAMEG00000026623) #27	C1orf52 (ENSAMEG00000023530) #28	SYDE2 (ENSAMEG00000017261) #29	DNAI3 (ENSAMEG00000017265) #30	MCOLN3 (ENSAMEG00000017280) #31	MCOLN2 (ENSAMEG00000017295) #32	SSX2IP (ENSAMEG00000006467) #34	CTBS (ENSAMEG00000000372) #35	SPATA1 (ENSAMEG00000000388) #36	ENSAMEG00000029878 ##37
Mustelinae	ANCESTRAL SPECIES	60	ENSGT00940000160703	ENSGT00940000154265.hb.a	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671.q #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00390000009268.y.a	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Ferret	MODERN SPECIES	197	ENSMPUG00000004752	ENSMPUG00000004765	ENSMPUG00000004776	ENSMPUG00000018788	GBP1 (ENSMPUG00000004780) #8	KYAT3 (ENSMPUG00000004793) #10	GTF2B (ENSMPUG00000004799) #11	PKN2 (ENSMPUG00000004804) #12	ENSMPUG00000004816	LMO4 (ENSMPUG00000004821) #13	HS2ST1 (ENSMPUG00000004829) #14	SH3GLB1 (ENSMPUG00000004832) #16	ENSMPUG00000004938 #18	CLCA4 (ENSMPUG00000005112) #19	CLCA1 (ENSMPUG00000005181) #20	ODF2L (ENSMPUG00000005220) #22	COL24A1 (ENSMPUG00000005229)	ZNHIT6 (ENSMPUG00000005352) #24	CCN1 (ENSMPUG00000005430) #25	DDAH1 (ENSMPUG00000005441) #26	BCL10 (ENSMPUG00000005447) #27	ENSMPUG00000005524 #28	SYDE2 (ENSMPUG00000005531) #29	DNAI3 (ENSMPUG00000005544) #30	MCOLN3 (ENSMPUG00000005571) #31	LPAR3 (ENSMPUG00000005683) #33	SSX2IP (ENSMPUG00000005687) #34	CTBS (ENSMPUG00000005696) #35	SPATA1 (ENSMPUG00000005701) #36	ENSMPUG00000005730 ##37	ENSMPUG00000005736
American mink	MODERN SPECIES	141							LMO4 (ENSNVIG00000010319) #13	ENSNVIG00000010303	HS2ST (ENSNVIG00000010265) #14	SELENOF (ENSNVIG00000010248) #15	SH3GLB1 (ENSNVIG00000010176) #16	ENSNVIG00000010085 #18	CLCA4 (ENSNVIG00000010023) #19	CLCA1 (ENSNVIG00000009950) #20	CLCA2 (ENSNVIG00000009915) #21	ODF2L (ENSNVIG00000009848) #22	COL24A1 (ENSNVIG00000009756)	ZNHIT6 (ENSNVIG00000009678) #24	CCN1 (ENSNVIG00000009667) #25	ENSNVIG00000009665	DDAH1 (ENSNVIG00000009631) #26	BCL10 (ENSNVIG00000009612) #27	C1orf52 (ENSNVIG00000009606) #28	SYDE2 (ENSNVIG00000009581) #29	DNAI3 (ENSNVIG00000009565) #30	MCOLN3 (ENSNVIG00000009481) #31	MCOLN2 (ENSNVIG00000009411) #32	LPAR3 (ENSNVIG00000009396) #33	SSX2IP (ENSNVIG00000009366) #34	CTBS (ENSNVIG00000009351) #35	SPATA1 (ENSNVIG00000009323) #36
Canidae	ANCESTRAL SPECIES	18	ENSGT00940000154265	ENSGT00940000162684	ENSGT00940000164661	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00950000183199.a.b.p	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00940000154265	ENSGT00940000162684	ENSGT00940000164661	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00950000183199.a.b.p	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35
Dingo	MODERN SPECIES	172	KYAT3 (ENSCAFG00020013672) #10	GTF2B (ENSCAFG00020013683) #11	ENSCAFG00020013691	ENSCAFG00020013692	ENSCAFG00020013695	ENSCAFG00020013716 #12	LMO4 (ENSCAFG00020013723) #13	HS2ST1 (ENSCAFG00020013749) #14	SELENOF (ENSCAFG00020013750) #15	ENSCAFG00020013754	SH3GLB1 (ENSCAFG00020013756) #16	ENSCAFG00020013760 #18	CLCA4 (ENSCAFG00020013813) #19	CLCA1 (ENSCAFG00020013898) #20	CLCA2 (ENSCAFG00020013957) #21	ODF2L (ENSCAFG00020013982) #22	ENSCAFG00020014075	ENSCAFG00020014085	ENSCAFG00020014087	ZNHIT6 (ENSCAFG00020014100) #24	CCN1 (ENSCAFG00020014107) #25	ENSCAFG00020014109	DDAH1 (ENSCAFG00020014115) #26	BCL10 (ENSCAFG00020014121) #27	C1orf52 (ENSCAFG00020014126) #28	SYDE2 (ENSCAFG00020014128) #29	DNAI3 (ENSCAFG00020014165) #30	MCOLN3 (ENSCAFG00020014182) #31	MCOLN2 (ENSCAFG00020014195) #32	LPAR3 (ENSCAFG00020014218) #33	ENSCAFG00020014228
Dog	MODERN SPECIES	34	LRRC8B (ENSCAFG00845017669)	ENSCAFG00845017796	GBP1 (ENSCAFG00845018127) #8	KYAT3 (ENSCAFG00845018455) #10	GTF2B (ENSCAFG00845018664) #11	ENSCAFG00845018785	ENSCAFG00845018822	PKN2 (ENSCAFG00845018917) #12	LMO4 (ENSCAFG00845019328) #13	HS2ST1 (ENSCAFG00845019416) #14	SH3GLB1 (ENSCAFG00845019543) #16	ENSCAFG00845020134 #18	CLCA4 (ENSCAFG00845020831) #19	CLCA1 (ENSCAFG00845020906) #20	CLCA2 (ENSCAFG00845021008) #21	ODF2L (ENSCAFG00845021153) #22	ENSCAFG00845021655	ENSCAFG00845021690	COL24A1 (ENSCAFG00845022035)	ENSCAFG00845024397	ENSCAFG00845024424	ZNHIT6 (ENSCAFG00845024485) #24	CCN1 (ENSCAFG00845024708) #25	ENSCAFG00845024791	ENSCAFG00845001033	DDAH1 (ENSCAFG00845001064) #26	BCL10 (ENSCAFG00845001105) #27	C6H1orf52 (ENSCAFG00845001130) #28	SYDE2 (ENSCAFG00845001161) #29	WDR63 (ENSCAFG00845001218) #30	MCOLN3 (ENSCAFG00845001310) #31
Red fox	MODERN SPECIES	50	ENSVVUG00000030200	GBP1 (ENSVVUG00000030199) #8	KYAT3 (ENSVVUG00000030196) #10	ENSVVUG00000030195	GTF2B (ENSVVUG00000030194) #11	ENSVVUG00000030193	PKN2 (ENSVVUG00000030190) #12	LMO4 (ENSVVUG00000030166) #13	HS2ST1 (ENSVVUG00000030160) #14	SELENOF (ENSVVUG00000030159) #15	SH3GLB1 (ENSVVUG00000030155) #16	ENSVVUG00000030152 #18	CLCA4 (ENSVVUG00000030149) #19	CLCA1 (ENSVVUG00000030143) #20	CLCA2 (ENSVVUG00000030122) #21	ODF2L (ENSVVUG00000030120) #22	ENSVVUG00000030118	ENSVVUG00000030110	ENSVVUG00000030103	ZNHIT6 (ENSVVUG00000030102) #24	CYR61 (ENSVVUG00000030100) #25	ENSVVUG00000030098	DDAH1 (ENSVVUG00000030097) #26	BCL10 (ENSVVUG00000030096) #27	C1orf52 (ENSVVUG00000030094) #28	SYDE2 (ENSVVUG00000030093) #29	WDR63 (ENSVVUG00000030090) #30	MCOLN3 (ENSVVUG00000030089) #31	MCOLN2 (ENSVVUG00000030088) #32	LPAR3 (ENSVVUG00000030085) #33	SSX2IP (ENSVVUG00000030083) #34
Felidae	ANCESTRAL SPECIES	10	ENSGT00940000162370.g	ENSGT00940000164799	ENSGT00940000162370.h	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Panthera	ANCESTRAL SPECIES	4	ENSGT00940000154265	ENSGT00940000162684	ENSGT00940000162370.h	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00940000154265	ENSGT00940000156840.b #8	ENSGT00940000162370.g	ENSGT00940000164799	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
lion	MODERN SPECIES	8	GBP1 (ENSPLOG00000007908) #8	GBP4 (ENSPLOG00000007964)	ENSPLOG00000008043	KYAT3 (ENSPLOG00000008087) #10	GTF2B (ENSPLOG00000008135) #11	PKN2 (ENSPLOG00000008310) #12	LMO4 (ENSPLOG00000008412) #13	HS2ST1 (ENSPLOG00000008504) #14	H2AZ1 (ENSPLOG00000008536)	SELENOF (ENSPLOG00000008569) #15	SH3GLB1 (ENSPLOG00000008636) #16	ENSPLOG00000008847 #18	CLCA4 (ENSPLOG00000009130) #19	CLCA1 (ENSPLOG00000009243) #20	CLCA2 (ENSPLOG00000009343) #21	ODF2L (ENSPLOG00000009448) #22	COL24A1 (ENSPLOG00000009722)	ZNHIT6 (ENSPLOG00000009990) #24	CCN1 (ENSPLOG00000010073) #25	ENSPLOG00000010159	DDAH1 (ENSPLOG00000010185) #26	BCL10 (ENSPLOG00000010271) #27	C1orf52 (ENSPLOG00000010306) #28	SYDE2 (ENSPLOG00000010350) #29	DNAI3 (ENSPLOG00000010446) #30	ENSPLOG00000010679	MCOLN3 (ENSPLOG00000010724) #31	MCOLN2 (ENSPLOG00000010836) #32	LPAR3 (ENSPLOG00000010887) #33	SSX2IP (ENSPLOG00000005570) #34	CTBS (ENSPLOG00000005615) #35
leopard	MODERN SPECIES	62	ENSPPRG00000024736	GBP3 (ENSPPRG00000024538)	KYAT3 (ENSPPRG00000024297) #10	GTF2B (ENSPPRG00000024228) #11	PKN2 (ENSPPRG00000023367) #12	LMO4 (ENSPPRG00000022948) #13	ENSPPRG00000022731	ENSPPRG00000000985	HS2ST1 (ENSPPRG00000001594) #14	SELENOF (ENSPPRG00000003036) #15	SH3GLB1 (ENSPPRG00000005342) #16	ENSPPRG00000008796 #18	CLCA4 (ENSPPRG00000010047) #19	CLCA1 (ENSPPRG00000010379) #20	CLCA2 (ENSPPRG00000016194) #21	ODF2L (ENSPPRG00000024565) #22	ENSPPRG00000024439	COL24A1 (ENSPPRG00000024037)	ZNHIT6 (ENSPPRG00000023340) #24	CCN1 (ENSPPRG00000023322) #25	ENSPPRG00000021077	DDAH1 (ENSPPRG00000000442) #26	BCL10 (ENSPPRG00000000878) #27	C1orf52 (ENSPPRG00000001522) #28	SYDE2 (ENSPPRG00000002218) #29	DNAI3 (ENSPPRG00000004873) #30	MCOLN3 (ENSPPRG00000006193) #31	MCOLN2 (ENSPPRG00000006914) #32	LPAR3 (ENSPPRG00000006969) #33	SSX2IP (ENSPPRG00000008492) #34	ENSPPRG00000008708
Tiger	MODERN SPECIES	126	GBP1 (ENSPTIG00000009314) #8	ENSPTIG00000009551	ENSPTIG00000009820	KYAT3 (ENSPTIG00000009897) #10	GTF2B (ENSPTIG00000010053) #11	PKN2 (ENSPTIG00000010226) #12	LMO4 (ENSPTIG00000010739) #13	HS2ST1 (ENSPTIG00000010901) #14	SELENOF (ENSPTIG00000011115) #15	SH3GLB1 (ENSPTIG00000011684) #16	ENSPTIG00000012017 #18	ENSPTIG00000012116	CLCA4 (ENSPTIG00000012168) #19	CLCA1 (ENSPTIG00000012542) #20	CLCA2 (ENSPTIG00000012779) #21	ODF2L (ENSPTIG00000013135) #22	COL24A1 (ENSPTIG00000013808)	ZNHIT6 (ENSPTIG00000014171) #24	CCN1 (ENSPTIG00000014498) #25	ENSPTIG00000010331	DDAH1 (ENSPTIG00000014695) #26	BCL10 (ENSPTIG00000015138) #27	C1orf52 (ENSPTIG00000015690) #28	SYDE2 (ENSPTIG00000015910) #29	DNAI3 (ENSPTIG00000016214) #30	MCOLN3 (ENSPTIG00000016693) #31	MCOLN2 (ENSPTIG00000017601) #32	LPAR3 (ENSPTIG00000017836) #33	SSX2IP (ENSPTIG00000017936) #34	CTBS (ENSPTIG00000018263) #35	SPATA1 (ENSPTIG00000019012) #36
Cat	MODERN SPECIES	239	ENSFCAG00000011849	GBP1 (ENSFCAG00000001014) #8	KYAT3 (ENSFCAG00000007861) #10	GTF2B (ENSFCAG00000005961) #11	ENSFCAG00000049807	PKN2 (ENSFCAG00000024813) #12	LMO4 (ENSFCAG00000044371) #13	HS2ST1 (ENSFCAG00000008006) #14	SELENOF (ENSFCAG00000005249) #15	SH3GLB1 (ENSFCAG00000028517) #16	ENSFCAG00000028907 #18	ENSFCAG00000030426	CLCA4 (ENSFCAG00000018343) #19	CLCA1 (ENSFCAG00000031867) #20	CLCA2 (ENSFCAG00000008210) #21	ODF2L (ENSFCAG00000019281) #22	COL24A1 (ENSFCAG00000033986)	ZNHIT6 (ENSFCAG00000027469) #24	CCN1 (ENSFCAG00000031965) #25	DDAH1 (ENSFCAG00000029407) #26	BCL10 (ENSFCAG00000036364) #27	CC1H1orf52 (ENSFCAG00000035401) #28	SYDE2 (ENSFCAG00000027468) #29	DNAI3 (ENSFCAG00000011197) #30	MCOLN3 (ENSFCAG00000011196) #31	MCOLN2 (ENSFCAG00000011193) #32	LPAR3 (ENSFCAG00000008799) #33	SSX2IP (ENSFCAG00000023838) #34	CTBS (ENSFCAG00000046319) #35	SPATA1 (ENSFCAG00000022598) #36	GNG5 (ENSFCAG00000038836) ##37
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000154265	ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Equus	ANCESTRAL SPECIES	3	ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416.j #19	ENSGT00940000160416.i.b #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00960000186747	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Horse	MODERN SPECIES	26	ENSECAG00000032271	GBP1 (ENSECAG00000021220) #8	KYAT3 (ENSECAG00000023747) #10	GTF2B (ENSECAG00000024914) #11	PKN2 (ENSECAG00000024916) #12	ENSECAG00000055176	ENSECAG00000052391	LMO4 (ENSECAG00000025150) #13	HS2ST1 (ENSECAG00000000800) #14	SH3GLB1 (ENSECAG00000009160) #16	ENSECAG00000014656 #18	ENSECAG00000017843 #19	ENSECAG00000035060 #19	CLCA1 (ENSECAG00000057201) #20	CLCA2 (ENSECAG00000020901) #21	ODF2L (ENSECAG00000022058) #22	COL24A1 (ENSECAG00000023199)	ZNHIT6 (ENSECAG00000024978) #24	CCN1 (ENSECAG00000024993) #25	DDAH1 (ENSECAG00000024997) #26	BCL10 (ENSECAG00000025005) #27	C5H1orf52 (ENSECAG00000025029) #28	SYDE2 (ENSECAG00000025133) #29	DNAI3 (ENSECAG00000000764) #30	MCOLN3 (ENSECAG00000007249) #31	MCOLN2 (ENSECAG00000011008) #32	LPAR3 (ENSECAG00000049816) #33	SSX2IP (ENSECAG00000012872) #34	ENSECAG00000048925	ENSECAG00000056260	CTBS (ENSECAG00000015643) #35
Donkey	MODERN SPECIES	7	KYAT3 (ENSEASG00005013214) #10	ENSEASG00005029666	GTF2B (ENSEASG00005013218) #11	PKN2 (ENSEASG00005013220) #12	LMO4 (ENSEASG00005013229) #13	HS2ST1 (ENSEASG00005013232) #14	SELENOF (ENSEASG00005035562) #15	SH3GLB1 (ENSEASG00005013235) #16	ENSEASG00005013238 #18	ENSEASG00005013293 #19	ENSEASG00005014000 #19	ENSEASG00005032323 #19	ENSEASG00005013994 #19	CLCA1 (ENSEASG00005014026) #20	CLCA2 (ENSEASG00005014061) #21	ODF2L (ENSEASG00005014068) #22	COL24A1 (ENSEASG00005024938)	ZNHIT6 (ENSEASG00005014084) #24	CCN1 (ENSEASG00005014085) #25	ENSEASG00005034815	DDAH1 (ENSEASG00005014087) #26	BCL10 (ENSEASG00005014089) #27	C1orf52 (ENSEASG00005014090) #28	SYDE2 (ENSEASG00005023929) #29	DNAI3 (ENSEASG00005014094) #30	MCOLN3 (ENSEASG00005014101) #31	MCOLN2 (ENSEASG00005014110) #32	LPAR3 (ENSEASG00005014129) #33	SSX2IP (ENSEASG00005014134) #34	CTBS (ENSEASG00005014138) #35	SPATA1 (ENSEASG00005014155) #36
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000154265	ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36	ENSGT01100000263525.a.b.b.c.b ##37
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000154265	ENSGT00940000162684	ENSGT00940000162370	ENSGT00940000156840.b #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36	ENSGT01100000263525.a.b.b.c.b ##37
Microbat	MODERN SPECIES	1063	ENSMLUG00000023035 #8	ENSMLUG00000028624 #8	KYAT3 (ENSMLUG00000000157) #10	GTF2B (ENSMLUG00000026250) #11	PKN2 (ENSMLUG00000013371) #12	ENSMLUG00000030647	LMO4 (ENSMLUG00000004838) #13	HS2ST1 (ENSMLUG00000030087) #14	SELENOF (ENSMLUG00000014648) #15	SH3GLB1 (ENSMLUG00000012086) #16	ENSMLUG00000015086 #18	ENSMLUG00000015080 #19	ENSMLUG00000026221 #19	CLCA1 (ENSMLUG00000015070) #20	CLCA2 (ENSMLUG00000015062) #21	ODF2L (ENSMLUG00000015055) #22	COL24A1 (ENSMLUG00000009578)	ZNHIT6 (ENSMLUG00000000257) #24	CCN1 (ENSMLUG00000015472) #25
Greater horseshoe bat	MODERN SPECIES	27	LRRC8B (ENSRFEG00010011713)	GBP5 (ENSRFEG00010011675)	GBP6 (ENSRFEG00010011390)	GBP1 (ENSRFEG00010011291) #8	KYAT3 (ENSRFEG00010011208) #10	GTF2B (ENSRFEG00010011164) #11	PKN2 (ENSRFEG00010011090) #12	LMO4 (ENSRFEG00010011036) #13	HS2ST1 (ENSRFEG00010010982) #14	SELENOF (ENSRFEG00010010937) #15	SH3GLB1 (ENSRFEG00010010748) #16	ENSRFEG00010010677 #18	CLCA4 (ENSRFEG00010010608) #19	CLCA1 (ENSRFEG00010010535) #20	CLCA2 (ENSRFEG00010010308) #21	ODF2L (ENSRFEG00010010033) #22	ENSRFEG00010009977	COL24A1 (ENSRFEG00010009929)	ZNHIT6 (ENSRFEG00010009748) #24	CCN1 (ENSRFEG00010009708) #25	DDAH1 (ENSRFEG00010009596) #26	BCL10 (ENSRFEG00010009517) #27	ENSRFEG00010009469 #28	SYDE2 (ENSRFEG00010009428) #29	DNAI3 (ENSRFEG00010009062) #30	MCOLN3 (ENSRFEG00010008879) #31	MCOLN2 (ENSRFEG00010008712) #32	LPAR3 (ENSRFEG00010008696) #33	SSX2IP (ENSRFEG00010008650) #34	ENSRFEG00010008577 #35	ENSRFEG00010008537 #35
Megabat	MODERN SPECIES	128															CLCA2 (ENSPVAG00000012282) #21	ODF2L (ENSPVAG00000012278) #22	COL24A1 (ENSPVAG00000012269)	ZNHIT6 (ENSPVAG00000012265) #24
Atlantogenata	ANCESTRAL SPECIES	11			ENSGT00940000162370	ENSGT00940000156840 #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36	ENSGT01100000263525.a.b.b #37
Afrotheria	ANCESTRAL SPECIES	21			ENSGT00940000162370	ENSGT00940000156840 #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36	ENSGT01100000263525.a.b.b #37
Afrotheria_a	ANCESTRAL SPECIES	20				ENSGT00940000162370	ENSGT00940000156840 #8	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36	ENSGT01100000263525.a.b.b #37
Elephant	MODERN SPECIES	145	ENSLAFG00000022418 #8	ENSLAFG00000030117	ENSLAFG00000027769	ENSLAFG00000016456 #8	ENSLAFG00000000440 #8	KYAT3 (ENSLAFG00000000422) #10	GTF2B (ENSLAFG00000006102) #11	PKN2 (ENSLAFG00000010893) #12	LMO4 (ENSLAFG00000017723) #13	HS2ST1 (ENSLAFG00000011894) #14	SH3GLB1 (ENSLAFG00000017719) #16	ENSLAFG00000007726 #18	CLCA4 (ENSLAFG00000014375) #19	CLCA1 (ENSLAFG00000006917) #20	CLCA2 (ENSLAFG00000006916) #21	ODF2L (ENSLAFG00000010775) #22	ENSLAFG00000012889	ZNHIT6 (ENSLAFG00000032483) #24	CCN1 (ENSLAFG00000022979) #25	DDAH1 (ENSLAFG00000010363) #26	BCL10 (ENSLAFG00000003648) #27	C1orf52 (ENSLAFG00000007499) #28	SYDE2 (ENSLAFG00000016031) #29	DNAI3 (ENSLAFG00000016022) #30	MCOLN3 (ENSLAFG00000016018) #31	MCOLN2 (ENSLAFG00000029928) #32	LPAR3 (ENSLAFG00000010892) #33	SSX2IP (ENSLAFG00000013496) #34	CTBS (ENSLAFG00000011739) #35	SPATA1 (ENSLAFG00000013256) #36	ENSLAFG00000007034 #37
Hyrax	MODERN SPECIES	1744																ODF2L (ENSPCAG00000000635) #22
Tenrec	MODERN SPECIES	2152																ODF2L (ENSETEG00000007673) #22
Xenarthra	ANCESTRAL SPECIES	194								ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000160416 #19	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30
Armadillo	MODERN SPECIES	4216							ENSDNOG00000006512	LMO4 (ENSDNOG00000047628) #13	HS2ST1 (ENSDNOG00000049698) #14	SELENOF (ENSDNOG00000004701) #15	SH3GLB1 (ENSDNOG00000039119) #16	ENSDNOG00000040224 #18	CLCA4 (ENSDNOG00000001159) #19	CLCA1 (ENSDNOG00000001155) #20	CLCA2 (ENSDNOG00000001152) #21	ODF2L (ENSDNOG00000010680) #22	ENSDNOG00000044659	COL24A1 (ENSDNOG00000016150)	ZNHIT6 (ENSDNOG00000044251) #24	CCN1 (ENSDNOG00000002945) #25	DDAH1 (ENSDNOG00000035701) #26	ENSDNOG00000010048 #27	C1orf52 (ENSDNOG00000031696) #28	SYDE2 (ENSDNOG00000017951) #29	DNAI3 (ENSDNOG00000017947) #30
Sloth	MODERN SPECIES	1952																ODF2L (ENSCHOG00000012515) #22
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00940000160703	ENSGT00940000154265	ENSGT00940000162297.j	ENSGT00940000162297.i.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000154682.C.p #20	ENSGT00940000154682.C.o #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT00940000160703	ENSGT00940000154265	ENSGT00940000162297.j	ENSGT00940000162297.i.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000154682.C.p #20	ENSGT00940000154682.C.o #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Diprotodontia	ANCESTRAL SPECIES	7	ENSGT00940000154265.rb	ENSGT00940000162297.i.a	ENSGT00940000154265.qb.b.a	ENSGT00940000162297.i.b	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000154682.C.p #20	ENSGT00940000154682.C.o #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36	ENSGT01100000263525.a.b.b #37
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00940000154265.qb.b.a	ENSGT00940000162297.i.b	ENSGT00940000154265.qb.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000157555 #18	ENSGT00940000154682.C.p #20	ENSGT00940000154682.C.o.a #20	ENSGT00940000154682.C.o.b #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000162448	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891 #35	ENSGT00390000003298 #36	ENSGT01100000263525.a.b.b.a #37
Common wonbat	MODERN SPECIES	1039														ENSVURG00010009706 #20	CLCA2 (ENSVURG00010009708) #21	ODF2L (ENSVURG00010009736) #22	ENSVURG00010009753	ENSVURG00010009770	ENSVURG00010009785 #24	CCN1 (ENSVURG00010009801) #25	DDAH1 (ENSVURG00010009811) #26	ENSVURG00010009831 #27	C1orf52 (ENSVURG00010009839) #28	SYDE2 (ENSVURG00010009847) #29	ENSVURG00010009867	DNAI3 (ENSVURG00010009880) #30	MCOLN3 (ENSVURG00010009987) #31	MCOLN2 (ENSVURG00010009998) #32	LPAR3 (ENSVURG00010010046) #33	SSX2IP (ENSVURG00010010062) #34	CTBS (ENSVURG00010010118) #35
koala	MODERN SPECIES	32	ENSPCIG00000003158	GTF2B (ENSPCIG00000003131) #11	ENSPCIG00000003124	PKN2 (ENSPCIG00000003094) #12	LMO4 (ENSPCIG00000014498) #13	HS2ST1 (ENSPCIG00000014500) #14	ENSPCIG00000014503 #15	ENSPCIG00000014505 #16	ENSPCIG00000016355 #20	ENSPCIG00000036253 #20	ENSPCIG00000007904 ##20	ENSPCIG00000036261	ENSPCIG00000010259 #20	ENSPCIG00000035533	CLCA2 (ENSPCIG00000014520) #21	ENSPCIG00000014539 #22	ENSPCIG00000006638	ENSPCIG00000006645 #24	CCN1 (ENSPCIG00000006652) #25	DDAH1 (ENSPCIG00000006654) #26	BCL10 (ENSPCIG00000006659) #27	C1orf52 (ENSPCIG00000006660) #28	SYDE2 (ENSPCIG00000006661) #29	DNAI3 (ENSPCIG00000006664) #30	MCOLN3 (ENSPCIG00000002891) #31	MCOLN2 (ENSPCIG00000006673) #32	LPAR3 (ENSPCIG00000006675) #33	SSX2IP (ENSPCIG00000006678) #34	CTBS (ENSPCIG00000006682) #35	SPATA1 (ENSPCIG00000006684) #36	ENSPCIG00000006687 #37
Wallaby	MODERN SPECIES	3029																ENSMEUG00000013037 #22
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000027035	ENSSHAG00000018700	ENSSHAG00000018678	ENSSHAG00000024464	ENSSHAG00000002751	KYAT3 (ENSSHAG00000003696) #10	GTF2B (ENSSHAG00000005314) #11	PKN2 (ENSSHAG00000006110) #12	LMO4 (ENSSHAG00000026182) #13	HS2ST1 (ENSSHAG00000004758) #14	SELENOF (ENSSHAG00000026888) #15	SH3GLB1 (ENSSHAG00000024847) #16	ENSSHAG00000030068 #20	ENSSHAG00000006437 #20	CLCA2 (ENSSHAG00000007009) #21	ODF2L (ENSSHAG00000008055) #22	ENSSHAG00000010203 #23	ENSSHAG00000012272 #24	CCN1 (ENSSHAG00000012809) #25	DDAH1 (ENSSHAG00000031838) #26	BCL10 (ENSSHAG00000024145) #27	ENSSHAG00000028512 #28	SYDE2 (ENSSHAG00000014946) #29	DNAI3 (ENSSHAG00000015341) #30	MCOLN3 (ENSSHAG00000015722) #31	MCOLN2 (ENSSHAG00000015932) #32	LPAR3 (ENSSHAG00000016258) #33	SSX2IP (ENSSHAG00000017020) #34	ENSSHAG00000017130	CTBS (ENSSHAG00000017432) #35	SPATA1 (ENSSHAG00000017459) #36
Opossum	MODERN SPECIES	1	ENSMODG00000003909	MODO-UC (ENSMODG00000038483)	ENSMODG00000041087	ENSMODG00000043543 #20	ENSMODG00000046721 #20	ENSMODG00000007979 #20	ENSMODG00000007923 #20	ENSMODG00000008041 #18	SH3GLB1 (ENSMODG00000008125) #16	ENSMODG00000008134 #15	HS2ST1 (ENSMODG00000008154) #14	LMO4 (ENSMODG00000008163) #13	ENSMODG00000048769	ENSMODG00000007456 #20	CLCA2 (ENSMODG00000000026) #21	ENSMODG00000000056 #22	ENSMODG00000000076 #23	ENSMODG00000048730	ENSMODG00000025703 #24	CCN1 (ENSMODG00000000285) #25	DDAH1 (ENSMODG00000000292) #26	BCL10 (ENSMODG00000037224) #27	C1orf52 (ENSMODG00000000302) #28	SYDE2 (ENSMODG00000000311) #29	DNAI3 (ENSMODG00000000354) #30	MCOLN3 (ENSMODG00000000378) #31	MCOLN2 (ENSMODG00000000390) #32	LPAR3 (ENSMODG00000000401) #33	SSX2IP (ENSMODG00000000409) #34	CTBS (ENSMODG00000000421) #35	SPATA1 (ENSMODG00000041648) #36
Platypus	MODERN SPECIES	15	KYAT3 (ENSOANG00000009128) #10	GTF2B (ENSOANG00000010586) #11	PKN2 (ENSOANG00000009127) #12	LMO4 (ENSOANG00000038085) #13	HS2ST1 (ENSOANG00000001761) #14	ENSOANG00000011970 #15	SH3GLB1 (ENSOANG00000008450) #16	ENSOANG00000013532 #18	ENSOANG00000014537 #20	ENSOANG00000044643 #20	ENSOANG00000047408 #20	ENSOANG00000015368 #20	ENSOANG00000044445 #20	ENSOANG00000049630 #20	CLCA2 (ENSOANG00000013527) #21	ODF2L (ENSOANG00000013526) #22	ENSOANG00000047756 #23	ENSOANG00000032029 #24	CCN1 (ENSOANG00000009120) #25	ENSOANG00000006824 #26	ENSOANG00000047143	SYDE2 (ENSOANG00000006822) #29	DNAI3 (ENSOANG00000021511) #30	MCOLN3 (ENSOANG00000006237) #31	MCOLN2 (ENSOANG00000003513) #32	LPAR3 (ENSOANG00000012529) #33	SSX2IP (ENSOANG00000003514) #34	ENSOANG00000021944	CTBS (ENSOANG00000036257) #35	ENSOANG00000044361	ENSOANG00000021004 #37
Sauria	ANCESTRAL SPECIES	7	ENSGT01060000248660	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Archelosauria	ANCESTRAL SPECIES	9	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Archosauria	ANCESTRAL SPECIES	11	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Aves	ANCESTRAL SPECIES	7	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Neognathae	ANCESTRAL SPECIES	8	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Neognathae_b	ANCESTRAL SPECIES	10	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.b ##15	ENSGT00940000161655	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Passeriformes	ANCESTRAL SPECIES	8	ENSGT00550000074822	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.b ##15	ENSGT00940000161655	ENSGT00940000155667 #16	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Great tit	MODERN SPECIES	28	TGFBR3 (ENSPMJG00000019399)	CDC7 (ENSPMJG00000019400)	ZNF644 (ENSPMJG00000019401)	BARHL2 (ENSPMJG00000019403)	ZNF326 (ENSPMJG00000019405)	LRRC8D (ENSPMJG00000019407)	LRRC8C (ENSPMJG00000019409)	LRRC8B (ENSPMJG00000019410)	KYAT3 (ENSPMJG00000019411) #10	GTF2B (ENSPMJG00000019412) #11	PKN2 (ENSPMJG00000019413) #12	LMO4 (ENSPMJG00000019420) #13	HS2ST1 (ENSPMJG00000019423) #14	ENSPMJG00000019424 ##15	SH3GLB1 (ENSPMJG00000019425) #16	ODF2L (ENSPMJG00000019426) #22	ENSPMJG00000019427 #23	ZNHIT6 (ENSPMJG00000019428) #24	CCN1 (ENSPMJG00000019429) #25	DDAH1 (ENSPMJG00000019431) #26	ENSPMJG00000019432	C1orf52 (ENSPMJG00000019433) #28	SYDE2 (ENSPMJG00000019434) #29	DNAI3 (ENSPMJG00000019435) #30	MCOLN3 (ENSPMJG00000019436) #31	MCOLN2 (ENSPMJG00000019437) #32	LPAR3 (ENSPMJG00000019438) #33	SSX2IP (ENSPMJG00000019440) #34	ENSPMJG00000019441	ENSPMJG00000019442	CTBS (ENSPMJG00000019443) #35
Passeriformes_d	ANCESTRAL SPECIES	9	ENSGT00530000063861.b.b	ENSGT00550000075011	ENSGT00550000074822	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Flycatcher	MODERN SPECIES	27	CDC7 (ENSFALG00000001771)	HFM1 (ENSFALG00000001781)	ZNF644 (ENSFALG00000001799)	BARHL2 (ENSFALG00000001803)	ZNF326 (ENSFALG00000001671)	LRRC8D (ENSFALG00000014964)	LRRC8C (ENSFALG00000028640)	LRRC8B (ENSFALG00000001662)	KYAT3 (ENSFALG00000001642) #10	GTF2B (ENSFALG00000001636) #11	PKN2 (ENSFALG00000001631) #12	LMO4 (ENSFALG00000006303) #13	HS2ST1 (ENSFALG00000029094) #14	ENSFALG00000027798 ##15	SH3GLB1 (ENSFALG00000006285) #16	ODF2L (ENSFALG00000006278) #22	ENSFALG00000006249 #23	ZNHIT6 (ENSFALG00000006230) #24	CCN1 (ENSFALG00000006221) #25	DDAH1 (ENSFALG00000006215) #26	ENSFALG00000006213	C1orf52 (ENSFALG00000006212) #28	SYDE2 (ENSFALG00000024732) #29	DNAI3 (ENSFALG00000006192) #30	MCOLN3 (ENSFALG00000006184) #31	MCOLN2 (ENSFALG00000006182) #32	LPAR3 (ENSFALG00000006179) #33	SSX2IP (ENSFALG00000006170) #34	ENSFALG00000006095	ENSFALG00000006054	CTBS (ENSFALG00000006047) #35
Passeriformes_g	ANCESTRAL SPECIES	10	ENSGT00530000063861.b.b	ENSGT00550000075011	ENSGT00550000074822	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Passeroidea	ANCESTRAL SPECIES	9	ENSGT00530000063861.b.b	ENSGT00550000075011	ENSGT00550000074822	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Zebra finch	MODERN SPECIES	30	ENSTGUG00000024670	ENSTGUG00000019436	BARHL2 (ENSTGUG00000023723)	ZNF326 (ENSTGUG00000006205)	LRRC8D (ENSTGUG00000006223)	LRRC8C (ENSTGUG00000006226)	LRRC8B (ENSTGUG00000006230)	KYAT3 (ENSTGUG00000006236) #10	GTF2B (ENSTGUG00000006258) #11	PKN2 (ENSTGUG00000006295) #12	LMO4 (ENSTGUG00000006316) #13	HS2ST1 (ENSTGUG00000023729) #14	ENSTGUG00000006332 ##15	ENSTGUG00000022678	SH3GLB1 (ENSTGUG00000006338) #16	ODF2L (ENSTGUG00000006364) #22	ENSTGUG00000006382 #23	CCN1 (ENSTGUG00000006428) #25	DDAH1 (ENSTGUG00000027174) #26	ENSTGUG00000019476	C1orf52 (ENSTGUG00000025081) #28	SYDE2 (ENSTGUG00000006457) #29	DNAI3 (ENSTGUG00000006462) #30	MCOLN3 (ENSTGUG00000006482) #31	MCOLN2 (ENSTGUG00000006506) #32	LPAR3 (ENSTGUG00000006518) #33	SSX2IP (ENSTGUG00000006524) #34	ENSTGUG00000006544	ENSTGUG00000029760	CTBS (ENSTGUG00000006581) #35	SPATA1 (ENSTGUG00000028467) #36
Neognathae_c	ANCESTRAL SPECIES	7	ENSGT00530000063861.b.b	ENSGT00550000075011	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Kakapo	MODERN SPECIES	25	CDC7 (ENSSHBG00005005141)	ZNF644 (ENSSHBG00005005132)	BARHL2 (ENSSHBG00005014389)	ZNF326 (ENSSHBG00005014378)	LRRC8D (ENSSHBG00005014361)	LRRC8C (ENSSHBG00005014355)	LRRC8B (ENSSHBG00005014327)	KYAT3 (ENSSHBG00005014312) #10	GTF2B (ENSSHBG00005014300) #11	PKN2 (ENSSHBG00005014287) #12	LMO4 (ENSSHBG00005014278) #13	HS2ST1 (ENSSHBG00005014272) #14	ENSSHBG00005014267 ##15	SH3GLB1 (ENSSHBG00005014257) #16	CLCA1 (ENSSHBG00005014229) #20	ODF2L (ENSSHBG00005014211) #22	ABCD3 (ENSSHBG00005014154)	ARHGAP29 (ENSSHBG00005014100)	ENSSHBG00005014078	ENSSHBG00005014037	ENSSHBG00005014011	GCLM (ENSSHBG00005013995)	DNTTIP2 (ENSSHBG00005013975)	F3 (ENSSHBG00005013945)	SLC44A3 (ENSSHBG00005013931)	CNN3 (ENSSHBG00005013919)	ALG14 (ENSSHBG00005013906)	TLCD4 (ENSSHBG00005013899)	HCCS (ENSSHBG00005013889)	RWDD3 (ENSSHBG00005013880)	PTBP2 (ENSSHBG00005013870)
Golden eagle	MODERN SPECIES	3	CDC7 (ENSACCG00020001988)	ZNF644 (ENSACCG00020002030)	BARHL2 (ENSACCG00020002062)	ZNF326 (ENSACCG00020002094)	LRRC8D (ENSACCG00020002113)	LRRC8C (ENSACCG00020002139)	LRRC8B (ENSACCG00020002152)	KYAT3 (ENSACCG00020002175) #10	GTF2B (ENSACCG00020002222) #11	PKN2 (ENSACCG00020002254) #12	LMO4 (ENSACCG00020002278) #13	HS2ST1 (ENSACCG00020002293) #14	ENSACCG00020002313 ##15	SH3GLB1 (ENSACCG00020002347) #16	CLCA1 (ENSACCG00020002757) #20	ODF2L (ENSACCG00020003016) #22	ENSACCG00020003058 #23	ENSACCG00020003084 #23	ZNHIT6 (ENSACCG00020003123) #24	CCN1 (ENSACCG00020003153) #25	DDAH1 (ENSACCG00020003181) #26	ENSACCG00020003194	C1orf52 (ENSACCG00020003204) #28	SYDE2 (ENSACCG00020003214) #29	DNAI3 (ENSACCG00020003229) #30	MCOLN3 (ENSACCG00020003253) #31	MCOLN2 (ENSACCG00020003279) #32	LPAR3 (ENSACCG00020003306) #33	SSX2IP (ENSACCG00020003322) #34	ENSACCG00020003402	ENSACCG00020003527
Galloanserae	ANCESTRAL SPECIES	8	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Anatidae	ANCESTRAL SPECIES	5	ENSGT01030000234558.C	ENSGT00940000156012	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703.a	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.b ##15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Pink-footed goose	MODERN SPECIES	1	COLGALT2 (ENSABRG00000019563)	RGL1 (ENSABRG00000019540)	ZNF326 (ENSABRG00000019531)	LRRC8D (ENSABRG00000019527)	LRRC8C (ENSABRG00000019523)	LRRC8B (ENSABRG00000019520)	KYAT3 (ENSABRG00000019512) #10	GTF2B (ENSABRG00000019503) #11	PKN2 (ENSABRG00000019497) #12	LMO4 (ENSABRG00000019475) #13	HS2ST1 (ENSABRG00000019463) #14	ENSABRG00000019458 ##15	SH3GLB1 (ENSABRG00000019451) #16	CLCA1 (ENSABRG00000018789) #20	CLCA2 (ENSABRG00000018718) #21	ODF2L (ENSABRG00000018706) #22	ENSABRG00000018651 #23	ENSABRG00000018648 #23	ZNHIT6 (ENSABRG00000018645) #24	CCN1 (ENSABRG00000018644) #25	DDAH1 (ENSABRG00000018643) #26	ENSABRG00000018642	C1orf52 (ENSABRG00000018640) #28	SYDE2 (ENSABRG00000018635) #29	DNAI3 (ENSABRG00000018607) #30	MCOLN3 (ENSABRG00000018595) #31	MCOLN2 (ENSABRG00000018585) #32	LPAR3 (ENSABRG00000018582) #33	SSX2IP (ENSABRG00000018577) #34	ENSABRG00000018543	ENSABRG00000018506
Duck	MODERN SPECIES	26	ZNF326 (ENSAPLG00000015720)	LRRC8D (ENSAPLG00000001184)	LRRC8C (ENSAPLG00000015632)	ENSAPLG00000020275	ENSAPLG00000015630	KYAT3 (ENSAPLG00000015343) #10	GTF2B (ENSAPLG00000015107) #11	PKN2 (ENSAPLG00000014769) #12	LMO4 (ENSAPLG00000030327) #13	ENSAPLG00000017611	HS2ST1 (ENSAPLG00000014649) #14	ENSAPLG00000024886 ##15	SH3GLB1 (ENSAPLG00000014317) #16	ENSAPLG00000021297 #20	ENSAPLG00000004603 #21	ODF2L (ENSAPLG00000004590) #22	ENSAPLG00000031231 #23	ENSAPLG00000022674 #23	ZNHIT6 (ENSAPLG00000003644) #24	CCN1 (ENSAPLG00000003558) #25	DDAH1 (ENSAPLG00000017443) #26	ENSAPLG00000003517	C1orf52 (ENSAPLG00000029539) #28	SYDE2 (ENSAPLG00000003510) #29	DNAI3 (ENSAPLG00000003460) #30	MCOLN3 (ENSAPLG00000003304) #31	MCOLN2 (ENSAPLG00000003123) #32	LPAR3 (ENSAPLG00000003113) #33	SSX2IP (ENSAPLG00000002969) #34	ENSAPLG00000016418	ENSAPLG00000021250
Phasianidae	ANCESTRAL SPECIES	7	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Phasianidae_b	ANCESTRAL SPECIES	7	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Chicken	MODERN SPECIES	37	HFM1 (ENSGALG00010021683)	ZNF644 (ENSGALG00010022152)	BARHL2 (ENSGALG00010022163)	ZNF326 (ENSGALG00010022743)	LRRC8D (ENSGALG00010022815)	LRRC8C (ENSGALG00010022831)	LRRC8B (ENSGALG00010022731)	KYAT3 (ENSGALG00010022877) #10	GTF2B (ENSGALG00010022930) #11	PKN2 (ENSGALG00010022983) #12	LMO4 (ENSGALG00010023007) #13	HS2ST1 (ENSGALG00010023030) #14	SELENOF (ENSGALG00010023059) #15	SH3GLB1 (ENSGALG00010023087) #16	CLCA2 (ENSGALG00010023101) #21	ODF2L (ENSGALG00010023161) #22	ENSGALG00010023195 #23	ZNHIT6 (ENSGALG00010023210) #24	CYR61 (ENSGALG00010020677) #25	DDAH1 (ENSGALG00010024494) #26	BCL10 (ENSGALG00010020681)	C1orf52 (ENSGALG00010020686) #28	SYDE2 (ENSGALG00010020753) #29	DNAI3 (ENSGALG00010020758) #30	MCOLN3 (ENSGALG00010020776) #31	MCOLN2 (ENSGALG00010020811) #32	LPAR3 (ENSGALG00010020840) #33	SSX2IP (ENSGALG00010021533) #34	VTG2 (ENSGALG00010020856)	ENSGALG00010020884	VTG3 (ENSGALG00010020897)
Turkey	MODERN SPECIES	1	ENSMGAG00000001464	ENSMGAG00000001460	ENSMGAG00000001446	ZNF326 (ENSMGAG00000008473)	LRRC8D (ENSMGAG00000015361)	LRRC8C (ENSMGAG00000008505)	LRRC8B (ENSMGAG00000008513)	KYAT3 (ENSMGAG00000008515) #10	GTF2B (ENSMGAG00000008534) #11	PKN2 (ENSMGAG00000008542) #12	HS2ST1 (ENSMGAG00000008617) #14	SELENOF (ENSMGAG00000008630) #15	SH3GLB1 (ENSMGAG00000008633) #16	CLCA1 (ENSMGAG00000008656) #20	CLCA2 (ENSMGAG00000017045) #21	ODF2L (ENSMGAG00000008713) #22	ENSMGAG00000018110 #23	ZNHIT6 (ENSMGAG00000008891) #24	CCN1 (ENSMGAG00000008895) #25	DDAH1 (ENSMGAG00000008919) #26	ENSMGAG00000008930	C1orf52 (ENSMGAG00000019997) #28	SYDE2 (ENSMGAG00000008940) #29	DNAI3 (ENSMGAG00000008955) #30	MCOLN3 (ENSMGAG00000008983) #31	MCOLN2 (ENSMGAG00000009009) #32	LPAR3 (ENSMGAG00000009028) #33	SSX2IP (ENSMGAG00000009038) #34	ENSMGAG00000009088	ENSMGAG00000019075	CTBS (ENSMGAG00000009191) #35
Japanese quail	MODERN SPECIES	26	ZNF644 (ENSCJPG00005008211)	BARHL2 (ENSCJPG00005008213)	ZNF326 (ENSCJPG00005008227)	LRRC8D (ENSCJPG00005008228)	LRRC8C (ENSCJPG00005008243)	LRRC8B (ENSCJPG00005008244)	KYAT3 (ENSCJPG00005008245) #10	GTF2B (ENSCJPG00005008246) #11	PKN2 (ENSCJPG00005008247) #12	LMO4 (ENSCJPG00005008250) #13	HS2ST1 (ENSCJPG00005008267) #14	ENSCJPG00005008274 ##15	SH3GLB1 (ENSCJPG00005008275) #16	CLCA1 (ENSCJPG00005008279) #20	CLCA2 (ENSCJPG00005008282) #21	ODF2L (ENSCJPG00005008286) #22	ENSCJPG00005008293 #23	ENSCJPG00005008294 #23	ZNHIT6 (ENSCJPG00005008295) #24	CCN1 (ENSCJPG00005008310) #25	DDAH1 (ENSCJPG00005008314) #26	ENSCJPG00005008315	C1orf52 (ENSCJPG00005008317) #28	SYDE2 (ENSCJPG00005008320) #29	DNAI3 (ENSCJPG00005008321) #30	MCOLN3 (ENSCJPG00005008324) #31	MCOLN2 (ENSCJPG00005008325) #32	LPAR3 (ENSCJPG00005008331) #33	SSX2IP (ENSCJPG00005008332) #34	ENSCJPG00005008333	ENSCJPG00005008334
African ostrich	MODERN SPECIES	546							SNTG1 (ENSSCUG00000006141)	ENSSCUG00000006150	PCMTD1 (ENSSCUG00000006158)	HS2ST1 (ENSSCUG00000006172) #14	ENSSCUG00000006175 ##15	SH3GLB1 (ENSSCUG00000006185) #16	ENSSCUG00000006192 #20	ENSSCUG00000006195 #20	CLCA2 (ENSSCUG00000006198) #21	ODF2L (ENSSCUG00000006202) #22	ENSSCUG00000006209 #23	ENSSCUG00000006212 #23	ZNHIT6 (ENSSCUG00000006216) #24	CCN1 (ENSSCUG00000006221) #25	DDAH1 (ENSSCUG00000006224) #26	ENSSCUG00000006225	SYDE2 (ENSSCUG00000006228) #29	DNAI3 (ENSSCUG00000006232) #30	MCOLN3 (ENSSCUG00000006237) #31	LPAR3 (ENSSCUG00000006241) #33	SSX2IP (ENSSCUG00000006242) #34	ENSSCUG00000006248	ENSSCUG00000006256	CTBS (ENSSCUG00000006264) #35	SPATA1 (ENSSCUG00000006268) #36
Australian saltwater crocodile	MODERN SPECIES	28	HFM1 (ENSCPRG00005016804)	ZNF644 (ENSCPRG00005016821)	BARHL2 (ENSCPRG00005016827)	ZNF326 (ENSCPRG00005016840)	LRRC8D (ENSCPRG00005016847)	LRRC8C (ENSCPRG00005016859)	LRRC8B (ENSCPRG00005016862)	KYAT3 (ENSCPRG00005016865) #10	GTF2B (ENSCPRG00005016872) #11	PKN2 (ENSCPRG00005016876) #12	ENSCPRG00005016895 #13	HS2ST1 (ENSCPRG00005016903) #14	ENSCPRG00005016908 ##15	SH3GLB1 (ENSCPRG00005016918) #16	CLCA2 (ENSCPRG00005016929) #21	ODF2L (ENSCPRG00005016938) #22	ENSCPRG00005016951 #23	ENSCPRG00005016956 #24	CCN1 (ENSCPRG00005016962) #25	DDAH1 (ENSCPRG00005016967) #26	ENSCPRG00005016978	C1orf52 (ENSCPRG00005016982) #28	SYDE2 (ENSCPRG00005016985) #29	DNAI3 (ENSCPRG00005016988) #30	MCOLN3 (ENSCPRG00005016998) #31	MCOLN2 (ENSCPRG00005017018) #32	LPAR3 (ENSCPRG00005017021) #33	SSX2IP (ENSCPRG00005017026) #34	ENSCPRG00005017034	ENSCPRG00005017056	CTBS (ENSCPRG00005017066) #35
Cryptodira	ANCESTRAL SPECIES	8	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000154284.b ##15	ENSGT00940000161655	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00990000204408	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00940000154682.C.k.b #20	ENSGT00940000161548 #21	ENSGT00530000063497.b.b #22	ENSGT00940000162448	ENSGT00530000063497.b.a #22	ENSGT00940000163583 #23	ENSGT00390000017201.j #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Emydidae	ANCESTRAL SPECIES	24	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00990000204408	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00940000154682.C.k.b #20	ENSGT00940000161548 #21	ENSGT00530000063497.b.a #22	ENSGT00940000162448
painted turtle	MODERN SPECIES	17	CTBS (ENSCPBG00000025914) #35	SPATA1 (ENSCPBG00000025913) #36	ENSCPBG00000025912 #37	RPF1 (ENSCPBG00000025911)	ENSCPBG00000025910	DNASE2B (ENSCPBG00000025908)	ENSCPBG00000025907	ENSCPBG00000025906	ENSCPBG00000025905	SAMD13 (ENSCPBG00000025904)	ENSCPBG00000025902	ENSCPBG00000025899 #20	ENSCPBG00000025883 #20	ENSCPBG00000025875 #20	CLCA2 (ENSCPBG00000025872) #21	ODF2L (ENSCPBG00000025869) #22	ENSCPBG00000025866 #23	ENSCPBG00000025855 #23	SOAT1 (ENSCPBG00000025847)	ENSCPBG00000025834	NPHS2 (ENSCPBG00000025820)	TDRD5 (ENSCPBG00000025813)	FAM163A (ENSCPBG00000025811)	ENSCPBG00000025805	TOR1AIP2 (ENSCPBG00000025801)	TOR1AIP1 (ENSCPBG00000025797)	CEP350 (ENSCPBG00000025778)	QSOX1 (ENSCPBG00000025772)	ENSCPBG00000025771	ACBD6 (ENSCPBG00000025770)	XPR1 (ENSCPBG00000025769)
Three-toed box turtle	MODERN SPECIES	97	ENSTMTG00000008841	ENSTMTG00000008850	ENSTMTG00000008869	ENSTMTG00000008882	ENSTMTG00000008893	ENSTMTG00000008897	ENSTMTG00000008905 #10	ENSTMTG00000008927 #11	ENSTMTG00000008943 #12	ENSTMTG00000008979 #13	ENSTMTG00000008988 #14	ENSTMTG00000009007 ##15	ENSTMTG00000009014 #16	ENSTMTG00000009182 #20	ENSTMTG00000011441 #21	ENSTMTG00000011499 #22	ENSTMTG00000011557	ENSTMTG00000011573 #23	ENSTMTG00000011591 #24	ENSTMTG00000011673 #25	ENSTMTG00000011678 #26	ENSTMTG00000011688	ENSTMTG00000011694 #28	ENSTMTG00000011702 #29	ENSTMTG00000011718 #30	ENSTMTG00000011742 #31	ENSTMTG00000011777 #32	ENSTMTG00000011803 #33	ENSTMTG00000011816 #34	ENSTMTG00000011870	ENSTMTG00000011969
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT00940000158258	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00990000204408	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00940000154682.C.k.b #20	ENSGT00940000161548 #21	ENSGT00530000063497.b.b #22	ENSGT00940000162448	ENSGT00530000063497.b.a #22	ENSGT00940000163583 #23	ENSGT00390000017201.j #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d
Testudinidae	ANCESTRAL SPECIES	23	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00990000204408	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00940000154682.C.l.b #20	ENSGT00940000154682.C.k.a #20	ENSGT00940000154682.C.k.b #20	ENSGT00940000161548 #21	ENSGT00530000063497.b.b #22	ENSGT00940000162448	ENSGT00940000163583 #23	ENSGT00390000017201.i #24
Goode s thornscrub tortoise	MODERN SPECIES	22	LRRC8C (ENSGEVG00005005775)	ENSGEVG00005005789	LRRC8B (ENSGEVG00005005810)	KYAT3 (ENSGEVG00005005831) #10	GTF2B (ENSGEVG00005005860) #11	PKN2 (ENSGEVG00005005927) #12	LMO4 (ENSGEVG00005006075) #13	HS2ST1 (ENSGEVG00005006085) #14	ENSGEVG00005006103	ENSGEVG00005006119 ##15	SH3GLB1 (ENSGEVG00005006135) #16	ENSGEVG00005006157 #20	ENSGEVG00005006251 #20	ENSGEVG00005006344 #20	CLCA2 (ENSGEVG00005006894) #21	ODF2L (ENSGEVG00005008710) #22	ENSGEVG00005008763 #23	ZNHIT6 (ENSGEVG00005008780) #24	CCN1 (ENSGEVG00005008830) #25	DDAH1 (ENSGEVG00005008857) #26	ENSGEVG00005008877	C1orf52 (ENSGEVG00005008893) #28	SYDE2 (ENSGEVG00005008926) #29	DNAI3 (ENSGEVG00005009007) #30	MCOLN3 (ENSGEVG00005009204) #31	MCOLN2 (ENSGEVG00005009299) #32	LPAR3 (ENSGEVG00005009383) #33	SSX2IP (ENSGEVG00005009418) #34	ENSGEVG00005009529	ENSGEVG00005010203	CTBS (ENSGEVG00005010771) #35
Abingdon island giant tortoise	MODERN SPECIES	671											ENSCABG00000003684 ##15	SH3GLB1 (ENSCABG00000003691) #16	ENSCABG00000003697 #20	ENSCABG00000003706 #20	ENSCABG00000003715 #20	ODF2L (ENSCABG00000003725) #22	ENSCABG00000003730	ENSCABG00000003733 #23	ZNHIT6 (ENSCABG00000003742) #24
Emydidae	ANCESTRAL SPECIES	22													ENSGT00940000163111.a.b.a.e	ENSGT00530000063936.a	ENSGT00940000154382.a.a	ENSGT00530000063497.b.b #22	ENSGT00940000163583 #23	ENSGT00390000017201.j #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #35
Three-toed box turtle	MODERN SPECIES	98	ENSTMTG00000005637	ENSTMTG00000005656	ENSTMTG00000005675	ENSTMTG00000005684	ENSTMTG00000005693	ENSTMTG00000005700	ENSTMTG00000005714 #10	ENSTMTG00000005736 #11	ENSTMTG00000005754 #12	ENSTMTG00000005801 #13	ENSTMTG00000005822 #14	ENSTMTG00000005884 ##15	ENSTMTG00000005898 #16	ENSTMTG00000006115 #20	ENSTMTG00000008084 #21	ENSTMTG00000008164 #22	ENSTMTG00000008191 #23	ENSTMTG00000008198 #24	ENSTMTG00000008228 #25	ENSTMTG00000008240 #26	ENSTMTG00000008249	ENSTMTG00000008260 #28	ENSTMTG00000008273 #29	ENSTMTG00000008283 #30	ENSTMTG00000008305 #31	ENSTMTG00000008334 #32	ENSTMTG00000008382	ENSTMTG00000008389 #33	ENSTMTG00000008410 #34	ENSTMTG00000008502	ENSTMTG00000008997
Chinese turtle	MODERN SPECIES	867									LMO4 (ENSPSIG00000015708) #13	ENSPSIG00000001800	HS2ST1 (ENSPSIG00000015802) #14	ENSPSIG00000006665 #15	ENSPSIG00000006673 #15	SH3GLB1 (ENSPSIG00000006840) #16	CLCA1 (ENSPSIG00000007038) #20	ODF2L (ENSPSIG00000011027) #22	ENSPSIG00000012330 #23	ZNHIT6 (ENSPSIG00000013856) #24	CCN1 (ENSPSIG00000014026) #25	DDAH1 (ENSPSIG00000014329) #26	ENSPSIG00000014531	C1orf52 (ENSPSIG00000014776) #28	SYDE2 (ENSPSIG00000014791) #29	DNAI3 (ENSPSIG00000014927) #30	MCOLN3 (ENSPSIG00000015503) #31	MCOLN2 (ENSPSIG00000015749) #32	LPAR3 (ENSPSIG00000016421) #33	SSX2IP (ENSPSIG00000016706) #34	ENSPSIG00000017070	ENSPSIG00000017211	CTBS (ENSPSIG00000017282) #35
Lepidosauria	ANCESTRAL SPECIES	11	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.b ##15	ENSGT00940000161655	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891 #35	ENSGT00390000003298 #36
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.b ##15	ENSGT00940000161655	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891.i #35	ENSGT00390000003298 #36
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00940000158258	ENSGT01060000248660	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891.i #35	ENSGT00390000003298 #36	ENSGT01100000263525.a.b.b #37
Elapidae	ANCESTRAL SPECIES	1	ENSGT00550000074822	ENSGT00940000158258	ENSGT01060000248660	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339.x #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892.e #26	ENSGT00490000043442 #27	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891.i.c #35	ENSGT00390000012891.i.d #35	ENSGT00390000003298.a #36
Elapidae_a	ANCESTRAL SPECIES	7	ENSGT00550000074822	ENSGT00940000158258	ENSGT01060000248660	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339.x #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892.e #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891.i.c #35	ENSGT00390000012891.i.d #35	ENSGT00390000003298.a #36
Blue-lipped sea krait	MODERN SPECIES	405																ENSLLTG00000017447 #22
Acanthophiinae	ANCESTRAL SPECIES	5	ENSGT00940000158258	ENSGT01060000248660	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339.x #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00990000213235	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892.e #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000012891.i.c #35	ENSGT00390000012891.i.d #35	ENSGT00390000003298.a #36
Eastern brown snake	MODERN SPECIES	13	CDC7 (ENSPTXG00000006407)	ZNF644 (ENSPTXG00000006406)	BARHL2 (ENSPTXG00000006405)	ZNF326 (ENSPTXG00000006404)	LRRC8D (ENSPTXG00000006403)	LRRC8C (ENSPTXG00000006402)	LRRC8B (ENSPTXG00000006401)	KYAT3 (ENSPTXG00000006400) #10	GTF2B (ENSPTXG00000006399) #11	ENSPTXG00000006398 #12	LMO4 (ENSPTXG00000006396) #13	HS2ST1 (ENSPTXG00000006395) #14	ENSPTXG00000006393 ##15	SH3GLB1 (ENSPTXG00000006392) #16	CLCA1 (ENSPTXG00000006390) #20	ODF2L (ENSPTXG00000006387) #22	ENSPTXG00000006386 #23	ENSPTXG00000006384	ENSPTXG00000006383 #23	ZNHIT6 (ENSPTXG00000006382) #24	CCN1 (ENSPTXG00000006381) #25	DDAH1 (ENSPTXG00000006379) #26	ENSPTXG00000006378	C1orf52 (ENSPTXG00000006377) #28	SYDE2 (ENSPTXG00000006376) #29	DNAI3 (ENSPTXG00000006375) #30	MCOLN3 (ENSPTXG00000006374) #31	MCOLN2 (ENSPTXG00000006373) #32	LPAR3 (ENSPTXG00000006372) #33	SSX2IP (ENSPTXG00000006371) #34	ENSPTXG00000006370
Indian cobra	MODERN SPECIES	2	ZNF644 (ENSNNAG00000002559)	BARHL2 (ENSNNAG00000002525)	ZNF326 (ENSNNAG00000002510)	ENSNNAG00000002497	ENSNNAG00000002491	LRRC8C (ENSNNAG00000002478)	LRRC8B (ENSNNAG00000002467)	KYAT3 (ENSNNAG00000002457) #10	GTF2B (ENSNNAG00000002447) #11	PKN2 (ENSNNAG00000002402) #12	LMO4 (ENSNNAG00000002380) #13	HS2ST1 (ENSNNAG00000002365) #14	ENSNNAG00000002348 ##15	SH3GLB1 (ENSNNAG00000002326) #16	CLCA1 (ENSNNAG00000002295) #20	ODF2L (ENSNNAG00000002277) #22	ENSNNAG00000002265 #23	ENSNNAG00000002256 #23	ENSNNAG00000002249 #24	CCN1 (ENSNNAG00000002243) #25	DDAH1 (ENSNNAG00000002237) #26	BCL10 (ENSNNAG00000002231) #27	C1orf52 (ENSNNAG00000002225) #28	SYDE2 (ENSNNAG00000002219) #29	DNAI3 (ENSNNAG00000002193) #30	MCOLN3 (ENSNNAG00000002119) #31	MCOLN2 (ENSNNAG00000002081) #32	LPAR3 (ENSNNAG00000002065) #33	SSX2IP (ENSNNAG00000002055) #34	ENSNNAG00000002040 #35	ENSNNAG00000002030 #35
Lizard	MODERN SPECIES	3	HS2ST1 (ENSACAG00000001671) #14	ENSACAG00000042055 ##15	SELENOF (ENSACAG00000034853) #15	SH3GLB1 (ENSACAG00000001709) #16	ENSACAG00000035491 #20	ENSACAG00000001800 #20	ENSACAG00000001873 #20	ENSACAG00000002162 #20	ENSACAG00000023543 #20	ENSACAG00000002212 #20	ENSACAG00000028563 #20	ENSACAG00000039412 #20	ENSACAG00000013593 #20	ENSACAG00000013587 #20	ENSACAG00000013637 #20	ODF2L (ENSACAG00000014138) #22	LEPR (ENSACAG00000008997)	LEPROT (ENSACAG00000008992)	DNAJC6 (ENSACAG00000008831)	ENSACAG00000008789	JAK1 (ENSACAG00000008478)	RAVER2 (ENSACAG00000008443)	CACHD1 (ENSACAG00000008354)	UBE2U (ENSACAG00000029076)	ROR1 (ENSACAG00000008290)	ENSACAG00000040114	PGM1 (ENSACAG00000008181)	EFCAB7 (ENSACAG00000008144)	ENSACAG00000029342	ENSACAG00000044958	ALG6 (ENSACAG00000008132)
Laterata	ANCESTRAL SPECIES	3	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.b ##15	ENSGT00940000161655	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000167202	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891.i.b #35	ENSGT00390000012891.j #35
Argentine black and white tegu	MODERN SPECIES	16	LRRC8D (ENSSMRG00000017436)	LRRC8C (ENSSMRG00000017431)	LRRC8B (ENSSMRG00000017430)	KYAT3 (ENSSMRG00000017428) #10	GTF2B (ENSSMRG00000017427) #11	PKN2 (ENSSMRG00000017422) #12	LMO4 (ENSSMRG00000017414) #13	HS2ST1 (ENSSMRG00000017412) #14	ENSSMRG00000017407 ##15	SH3GLB1 (ENSSMRG00000017405) #16	ENSSMRG00000017401 #20	ENSSMRG00000017395 #20	ENSSMRG00000017391 #20	ENSSMRG00000017379 #20	CLCA2 (ENSSMRG00000017375) #21	ODF2L (ENSSMRG00000017368) #22	ENSSMRG00000017350 #23	ZNHIT6 (ENSSMRG00000017343) #24	CCN1 (ENSSMRG00000017342) #25	DDAH1 (ENSSMRG00000017341) #26	ENSSMRG00000017339	C1orf52 (ENSSMRG00000017338) #28	SYDE2 (ENSSMRG00000017337) #29	DNAI3 (ENSSMRG00000017268) #30	MCOLN3 (ENSSMRG00000017266) #31	MCOLN2 (ENSSMRG00000017264) #32	LPAR3 (ENSSMRG00000017263) #33	SSX2IP (ENSSMRG00000017258) #34
Common wall lizard	MODERN SPECIES	14	GTF2B (ENSPMRG00000007781) #11	PKN2 (ENSPMRG00000007791) #12	ENSPMRG00000007806	ENSPMRG00000007809	LMO4 (ENSPMRG00000007814) #13	HS2ST1 (ENSPMRG00000007822) #14	ENSPMRG00000007827 ##15	SH3GLB1 (ENSPMRG00000007831) #16	ENSPMRG00000007842 #20	ENSPMRG00000007853 #20	ENSPMRG00000007863 #20	ENSPMRG00000007879 #20	ENSPMRG00000007933	CLCA2 (ENSPMRG00000007945) #21	ENSPMRG00000007964	ODF2L (ENSPMRG00000007971) #22	ENSPMRG00000007995	ENSPMRG00000008001 #23	ZNHIT6 (ENSPMRG00000008008) #24	ENSPMRG00000008012	CCN1 (ENSPMRG00000008016) #25	DDAH1 (ENSPMRG00000008019) #26	ENSPMRG00000008025	C1orf52 (ENSPMRG00000008029) #28	SYDE2 (ENSPMRG00000008032) #29	ENSPMRG00000008035	DNAI3 (ENSPMRG00000008062) #30	MCOLN3 (ENSPMRG00000008145) #31	MCOLN2 (ENSPMRG00000008153) #32	LPAR3 (ENSPMRG00000008163) #33	SSX2IP (ENSPMRG00000008172) #34
tuatara	MODERN SPECIES	1845														ENSSPUG00000015617 #20	CLCA2 (ENSSPUG00000015791) #21	ODF2L (ENSSPUG00000016411) #22	ENSSPUG00000016449 #23	ENSSPUG00000016457 #24	CCN1 (ENSSPUG00000016465) #25	ENSSPUG00000016472	DDAH1 (ENSSPUG00000016477) #26	ENSSPUG00000016484	C1orf52 (ENSSPUG00000016490) #28	SYDE2 (ENSSPUG00000016501) #29	DNAI3 (ENSSPUG00000016535) #30	MCOLN3 (ENSSPUG00000016549) #31	MCOLN2 (ENSSPUG00000016595) #32	LPAR3 (ENSSPUG00000016634) #33	SSX2IP (ENSSPUG00000016641) #34	CTBS (ENSSPUG00000016662) #35	SPATA1 (ENSSPUG00000016732) #36
Anura	ANCESTRAL SPECIES	162															ENSGT00940000154682.C.s.a.b #20	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892.b #26	ENSGT00490000043442 #27	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT01050000244941.B.d #33	ENSGT00390000007688 #34	ENSGT00390000005830	ENSGT01100000266472	ENSGT00990000204330	ENSGT00940000154396.b.a	ENSGT01050000244879.a.b
Frog	MODERN SPECIES	4	ciapin1 (ENSXETG00000013788)	setd6 (ENSXETG00000013793)	usb1 (ENSXETG00000013795)	kiaa0895l (ENSXETG00000013796)	exoc3l1 (ENSXETG00000013799)	anln (ENSXETG00000039411)	tmem208 (ENSXETG00000033520)	usp1 (ENSXETG00000013819)	elmo3 (ENSXETG00000013823)	e2f4 (ENSXETG00000003083)	ldhd (ENSXETG00000031980)	ENSXETG00000035261	lcat (ENSXETG00000003085)	ano10l (ENSXETG00000033689)	clca2 (ENSXETG00000003088) #20	odf2l (ENSXETG00000003090) #22	ENSXETG00000044401	col24a1 (ENSXETG00000003092) #23	znhit6 (ENSXETG00000037309) #24	ccn1 (ENSXETG00000003094) #25	ddah1 (ENSXETG00000047913) #26	bcl10 (ENSXETG00000003096) #27	syde2 (ENSXETG00000008629) #29	dnai3 (ENSXETG00000008630) #30	mcoln3 (ENSXETG00000008633) #31	lpar3 (ENSXETG00000008631) #33	ssx2ip (ENSXETG00000008635) #34	vtga2 (ENSXETG00000025072)	ctbs (ENSXETG00000008640) #35	gng5 (ENSXETG00000040021) #35	spata1 (ENSXETG00000008645) #36
Coelacanth	MODERN SPECIES	1414															clca1 (ENSLACG00000001367) #20	ENSLACG00000004844 #22	ENSLACG00000008016	ENSLACG00000011292 #23
Actinopterygii	ANCESTRAL SPECIES	57	ENSGT01060000248660	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000165852	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00940000163785.b	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891 #35
Neopterygii	ANCESTRAL SPECIES	9	ENSGT00940000158611	ENSGT00530000063777.b	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827 #10	ENSGT00390000006671 #11	ENSGT00940000154339 #12	ENSGT00940000157730 #13	ENSGT00530000063408.B #14	ENSGT00940000154284.a #15	ENSGT00940000155667 #16	ENSGT00940000154682.C #20	ENSGT00940000161548 #21	ENSGT01030000234583.a.a.d	ENSGT00530000063497.b #22	ENSGT00940000163583 #23	ENSGT00390000017201 #24	ENSGT00940000155151.b #25	ENSGT00940000157892 #26	ENSGT00940000165852	ENSGT00390000017398 #28	ENSGT01030000234635.a.a.a.a #29	ENSGT00940000156924 #30	ENSGT00950000183036.a.a #31	ENSGT00950000183036.a.b #32	ENSGT01050000244941.B.d #33	ENSGT00940000163785.b	ENSGT00390000007688 #34	ENSGT00530000064273.a.b	ENSGT00390000012891 #35
Osteoglossocephalai	ANCESTRAL SPECIES	1221															ENSGT01030000234583.a.a.d	ENSGT00530000063497.b #22
Osteoglossiformes	ANCESTRAL SPECIES	108																ENSGT00530000063497.b #22	ENSGT00390000017201 #24	ENSGT00940000155151.b.d.a #25	ENSGT00940000157892.p #26	ENSGT00940000157587.k.e	ENSGT00940000165852	ENSGT00940000178396	ENSGT00390000017043	ENSGT00940000156171.i	ENSGT00940000157878.a	ENSGT00940000160382.a	ENSGT00940000156589	ENSGT00570000079168.b.b.b.b	ENSGT01030000234528.A.a.a	ENSGT00950000183033.a.b.a	ENSGT00940000158189
Asian bonytongue	MODERN SPECIES	18	ENSSFOG00015029370	fggy (ENSSFOG00015014449)	PRRC2C (ENSSFOG00015014551)	myoc (ENSSFOG00015014597)	itpa (ENSSFOG00015014644)	ENSSFOG00015014683	ENSSFOG00015014767	DAB1 (ENSSFOG00015014836)	c8b (ENSSFOG00015014943)	C8A (ENSSFOG00015015192)	PLPP3 (ENSSFOG00015015220)	bloc1s2 (ENSSFOG00015015255)	USP24 (ENSSFOG00015015291)	dhcr24 (ENSSFOG00015015424)	lurap1 (ENSSFOG00015032439)	ODF2L (ENSSFOG00015015461) #22	ZNHIT6 (ENSSFOG00015027928) #24	ccn1 (ENSSFOG00015015529) #25	DDAH1 (ENSSFOG00015015568) #26	ENSSFOG00015030629	ENSSFOG00015015615 #29	MCOLN3 (ENSSFOG00015015628) #31	mcoln2 (ENSSFOG00015015658) #32	lpar3 (ENSSFOG00015031106) #33	ssx2ipa (ENSSFOG00015015720) #34	GNG5 (ENSSFOG00015015736) #37	SAMD13 (ENSSFOG00015015773)	prkacbb (ENSSFOG00015031970)	ENSSFOG00015006161	ENSSFOG00015015995	ADGRL2 (ENSSFOG00015015900)
P. kingsleyae	MODERN SPECIES	17	ENSPKIG00000001389	ENSPKIG00000001410	ONECUT3 (ENSPKIG00000001423)	OSBPL9 (ENSPKIG00000001482)	ENSPKIG00000001642	lurap1 (ENSPKIG00000001725)	ENSPKIG00000001741	dhcr24 (ENSPKIG00000001778)	USP24 (ENSPKIG00000001856)	bloc1s2 (ENSPKIG00000001971)	PLPP3 (ENSPKIG00000002028)	si:ch211-188c16.1 (ENSPKIG00000002090)	C8A (ENSPKIG00000002126)	c8b (ENSPKIG00000002158)	DAB1 (ENSPKIG00000002310)	ODF2L (ENSPKIG00000002567) #22	ENSPKIG00000002640	ENSPKIG00000002657 #24	ccn1 (ENSPKIG00000002680) #25	DDAH1 (ENSPKIG00000002698) #26	ENSPKIG00000002727	SYDE2 (ENSPKIG00000002743) #29	MCOLN3 (ENSPKIG00000002758) #31	mcoln2 (ENSPKIG00000002795) #32	LPAR3 (ENSPKIG00000002840) #33	ssx2ipa (ENSPKIG00000002857) #34	gng5 (ENSPKIG00000002879) #37	SAMD13 (ENSPKIG00000002903)	prkacbb (ENSPKIG00000002931)	ADGRL2 (ENSPKIG00000003040)	ENSPKIG00000003267
Clupeocephala	ANCESTRAL SPECIES	273	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00940000175752	ENSGT00940000156450.d	ENSGT00530000063790.a.b	ENSGT00530000063497.b #22	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37
Euteleosteomorpha	ANCESTRAL SPECIES	10	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00550000074794	ENSGT00940000160907.l	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781
Acanthomorphata	ANCESTRAL SPECIES		ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00390000011926	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Euacanthomorphacea	ANCESTRAL SPECIES	4	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Percomorphaceae	ANCESTRAL SPECIES	6	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Percomorphaceae_B	ANCESTRAL SPECIES	8	ENSGT00940000154044.a.a.q.b	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000013187	ENSGT00390000009724.d	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Percomorphaceae_C	ANCESTRAL SPECIES	6	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Percomorphaceae_D	ANCESTRAL SPECIES	6	ENSGT00940000154044.a.a.q.b	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000013187	ENSGT00390000009724.d	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Carangaria	ANCESTRAL SPECIES	5	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000013187	ENSGT00390000009724.d	ENSGT00940000167219	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Pleuronectoidei	ANCESTRAL SPECIES	1	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00940000167219	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Turbot	MODERN SPECIES	19	eef1da (ENSSMAG00000026770)	ENSSMAG00000017092	ENSSMAG00000033685	ftr67 (ENSSMAG00000017102)	si:ch73-52e5.2 (ENSSMAG00000017118)	them6 (ENSSMAG00000017123)	ENSSMAG00000023122	ENSSMAG00000017130	ENSSMAG00000027505	zgc:113531 (ENSSMAG00000017208)	b4galt2 (ENSSMAG00000017247)	atp6v0b (ENSSMAG00000017267)	kiss1ra (ENSSMAG00000017300)	ENSSMAG00000034783	ENSSMAG00000032958	ENSSMAG00000017541 #22	ENSSMAG00000017577 #25	ENSSMAG00000022734	ENSSMAG00000017598 #31	ssx2ipa (ENSSMAG00000017625) #34	ENSSMAG00000017728 #37	gpt (ENSSMAG00000017784)	c1ql3b (ENSSMAG00000017815)	pter (ENSSMAG00000017836)	ENSSMAG00000017854	ENSSMAG00000023736	ENSSMAG00000017868	egfra (ENSSMAG00000017876)	npc1 (ENSSMAG00000017984)	cables1 (ENSSMAG00000018109)	GATA6 (ENSSMAG00000018143)
Tongue sole	MODERN SPECIES	12	snap47 (ENSCSEG00000012311)	wnt9a (ENSCSEG00000012297)	wnt3a (ENSCSEG00000012289)	ENSCSEG00000012285	zgc:63882 (ENSCSEG00000012269)	guk1a (ENSCSEG00000012246)	si:ch73-52e5.2 (ENSCSEG00000012241)	them6 (ENSCSEG00000012235)	ENSCSEG00000012213	zgc:113531 (ENSCSEG00000012201)	ENSCSEG00000012182	b4galt2 (ENSCSEG00000012148)	atp6v0b (ENSCSEG00000012132)	kiss1ra (ENSCSEG00000012092)	ift22 (ENSCSEG00000012071)	ENSCSEG00000012051 #22	ENSCSEG00000012047 #25	MCOLN3 (ENSCSEG00000012017) #31	ENSCSEG00000012001	ssx2ipa (ENSCSEG00000011993) #34	gng5 (ENSCSEG00000011988) #37	ENSCSEG00000011985	gpt (ENSCSEG00000011958)	c1ql3b (ENSCSEG00000011945)	pter (ENSCSEG00000011932)	ENSCSEG00000011921	ENSCSEG00000011927	ENSCSEG00000011916	ENSCSEG00000011914	ENSCSEG00000011907	egfra (ENSCSEG00000011544)
Carangaria_A	ANCESTRAL SPECIES	2	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000013187	ENSGT00390000009724.d	ENSGT00940000167219	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Barramundi perch	MODERN SPECIES	69	adcyap1r1a (ENSLCAG00010000544)	ghrhra (ENSLCAG00010000854)	eef1da (ENSLCAG00010000870)	ENSLCAG00010000884	ftr67 (ENSLCAG00010000890)	si:ch73-52e5.2 (ENSLCAG00010000897)	them6 (ENSLCAG00010000902)	ENSLCAG00010000907	ENSLCAG00010000916	zgc:113531 (ENSLCAG00010000920)	b4galt2 (ENSLCAG00010000924)	atp6v0b (ENSLCAG00010000928)	kiss1ra (ENSLCAG00010000955)	atp5l (ENSLCAG00010001020)	ENSLCAG00010001028	ENSLCAG00010001032 #22	CCN1 (ENSLCAG00010001035) #25	ENSLCAG00010001037	MCOLN3 (ENSLCAG00010001052) #31	ssx2ipa (ENSLCAG00010001095) #34	gng5 (ENSLCAG00010001104) #37	gpt (ENSLCAG00010001192)	c1ql3b (ENSLCAG00010001409)	pter (ENSLCAG00010001415)	ENSLCAG00010001422	ENSLCAG00010001432	egfra (ENSLCAG00010001759)	npc1 (ENSLCAG00010003133)	cables1 (ENSLCAG00010003192)	gata6 (ENSLCAG00010003208)	mib1 (ENSLCAG00010003230)
Seriola	ANCESTRAL SPECIES		ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT01090000260059.b.e.b	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000013187	ENSGT00390000009724.d	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Greater amberjack	MODERN SPECIES	99	eef1da (ENSSDUG00000015374)	ENSSDUG00000015460	ftr67 (ENSSDUG00000015464)	si:ch73-52e5.2 (ENSSDUG00000015490)	them6 (ENSSDUG00000015499)	ENSSDUG00000015505	ENSSDUG00000015524	ENSSDUG00000015535	zgc:113531 (ENSSDUG00000015553)	b4galt2 (ENSSDUG00000015568)	atp6v0b (ENSSDUG00000015596)	ENSSDUG00000015622	kiss1ra (ENSSDUG00000015645)	ENSSDUG00000015657	ift22 (ENSSDUG00000015664)	ENSSDUG00000015673 #22	CCN1 (ENSSDUG00000015721) #25	ENSSDUG00000015742	MCOLN3 (ENSSDUG00000015757) #31	ssx2ipa (ENSSDUG00000015786) #34	gng5 (ENSSDUG00000015811) #37	gpt (ENSSDUG00000015841)	c1ql3b (ENSSDUG00000015894)	pter (ENSSDUG00000015909)	MMP16 (ENSSDUG00000015932)	egfra (ENSSDUG00000015965)	npc1 (ENSSDUG00000016069)	cables1 (ENSSDUG00000016193)	gata6 (ENSSDUG00000016226)	mib1 (ENSSDUG00000016258)	abhd3 (ENSSDUG00000016408)
Yellowtail amberjack	MODERN SPECIES	2609													kiss1ra (ENSSLDG00000020800)	ift22 (ENSSLDG00000020836)	atp5l (ENSSLDG00000020849)	ENSSLDG00000020866 #22	CCN1 (ENSSLDG00000020887) #25	ENSSLDG00000020894	MCOLN3 (ENSSLDG00000020908) #31	ssx2ipa (ENSSLDG00000020941) #34	gng5 (ENSSLDG00000020962) #37	gpt (ENSSLDG00000020969)	c1ql3b (ENSSLDG00000020995)	pter (ENSSLDG00000021005)	ENSSLDG00000021027	ENSSLDG00000021039	ENSSLDG00000021051	ENSSLDG00000021062	ENSSLDG00000021072	MMP16 (ENSSLDG00000021088)	egfra (ENSSLDG00000021153)
Anabantaria	ANCESTRAL SPECIES	8	ENSGT01090000260052.a.b.i	ENSGT00940000154044.a.a.q.b	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Anabantoidei	ANCESTRAL SPECIES	18	ENSGT01090000260052.a.a.a.a	ENSGT01090000260052.a.b.i	ENSGT00940000154044.a.a.q.b	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00980000202693	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781
Climbing perch	MODERN SPECIES	8	ENSATEG00000001853	ENSATEG00000001858	adcyap1r1a (ENSATEG00000001887)	ghrhra (ENSATEG00000002373)	eef1da (ENSATEG00000002422)	ftr67 (ENSATEG00000002449)	si:ch73-52e5.2 (ENSATEG00000002484)	them6 (ENSATEG00000002492)	ENSATEG00000028206	zgc:113531 (ENSATEG00000002514)	ENSATEG00000027098	b4galt2 (ENSATEG00000028149)	atp6v0b (ENSATEG00000002586)	kiss1ra (ENSATEG00000002645)	ENSATEG00000003627	ENSATEG00000003659 #22	ENSATEG00000025649 #25	ENSATEG00000003682	ENSATEG00000003692 #31	ssx2ipa (ENSATEG00000003756) #34	gpt (ENSATEG00000003845)	c1ql3b (ENSATEG00000003901)	pter (ENSATEG00000003914)	ENSATEG00000027757	ENSATEG00000003939	egfra (ENSATEG00000003981)	npc1 (ENSATEG00000004107)	cables1 (ENSATEG00000004208)	GATA6 (ENSATEG00000004262)	mib1 (ENSATEG00000004269)	ABHD3 (ENSATEG00000004381)
Siamese fighting fish	MODERN SPECIES	8	ENSBSLG00000015642	FYCO1 (ENSBSLG00000015645)	adcyap1r1a (ENSBSLG00000015685)	ghrhra (ENSBSLG00000016634)	eef1da (ENSBSLG00000016769)	ftr67 (ENSBSLG00000017062)	si:ch73-52e5.2 (ENSBSLG00000017103)	them6 (ENSBSLG00000017119)	ENSBSLG00000017134	ENSBSLG00000017170	zgc:113531 (ENSBSLG00000017190)	b4galt2 (ENSBSLG00000017203)	atp6v0b (ENSBSLG00000017257)	ENSBSLG00000017275	ift22 (ENSBSLG00000017365)	ENSBSLG00000017394 #22	CCN1 (ENSBSLG00000017470) #25	ENSBSLG00000017502 #31	ssx2ipa (ENSBSLG00000017642) #34	gng5 (ENSBSLG00000017758) #37	gpt (ENSBSLG00000017796)	c1ql3b (ENSBSLG00000018577)	pter (ENSBSLG00000018582)	pter (ENSBSLG00000018592)	pter (ENSBSLG00000018602)	ENSBSLG00000018608	MMP16 (ENSBSLG00000018619)	egfra (ENSBSLG00000018837)	npc1 (ENSBSLG00000019496)	cables1 (ENSBSLG00000021115)	gata6 (ENSBSLG00000021366)
Zig-zag eel	MODERN SPECIES	8	ENSMAMG00000027032	ENSMAMG00000017733	adcyap1r1a (ENSMAMG00000017704)	ghrhra (ENSMAMG00000017689)	eef1da (ENSMAMG00000027678)	ftr67 (ENSMAMG00000017659)	them6 (ENSMAMG00000017653)	ENSMAMG00000025195	ENSMAMG00000017619	zgc:113531 (ENSMAMG00000017613)	ENSMAMG00000017603	atp6v0b (ENSMAMG00000017585)	ENSMAMG00000017570	ENSMAMG00000027095	ENSMAMG00000017546	ENSMAMG00000017535 #22	ENSMAMG00000017322 #25	ENSMAMG00000017298	ENSMAMG00000017256 #31	ssx2ipa (ENSMAMG00000017241) #34	ENSMAMG00000017234 #37	ENSMAMG00000024654	gpt (ENSMAMG00000017210)	ENSMAMG00000017201	pter (ENSMAMG00000017187)	ENSMAMG00000017170	egfra (ENSMAMG00000017162)	npc1 (ENSMAMG00000017113)	cables1 (ENSMAMG00000017058)	GATA6 (ENSMAMG00000024704)	mib1 (ENSMAMG00000016976)
Eupercaria	ANCESTRAL SPECIES	24	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00990000210543	ENSGT00390000011926	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Tetraodontidae	ANCESTRAL SPECIES	30															ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000165852	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781
Fugu	MODERN SPECIES	14	twsg1a (ENSTRUG00000007883)	ankrd12 (ENSTRUG00000030647)	ndufv2 (ENSTRUG00000008205)	acss2l (ENSTRUG00000008349)	MTCL1 (ENSTRUG00000008561)	rab12 (ENSTRUG00000024455)	napgb (ENSTRUG00000009117)	PIEZO2 (ENSTRUG00000009299)	mppe1 (ENSTRUG00000009858)	TMEM14C (ENSTRUG00000019939)	pak1ip1 (ENSTRUG00000010365)	si:dkey-222f8.3 (ENSTRUG00000010495)	CC2D1B (ENSTRUG00000010514)	ZFYVE9 (ENSTRUG00000019506)	ift22 (ENSTRUG00000021657)	ENSTRUG00000010814 #22	ENSTRUG00000010845	ssx2ipa (ENSTRUG00000011160) #34	gng5 (ENSTRUG00000011297) #37	ENSTRUG00000026724	gpt (ENSTRUG00000011343)	c1ql3b (ENSTRUG00000030333)	pter (ENSTRUG00000011495)	ENSTRUG00000032413	ENSTRUG00000028980	ENSTRUG00000011547	egfra (ENSTRUG00000011834)	npc1 (ENSTRUG00000012253)	cables1 (ENSTRUG00000012617)	gata6 (ENSTRUG00000012674)	mib1 (ENSTRUG00000012844)
Tetraodon	MODERN SPECIES	7	ndufv2 (ENSTNIG00000014862)	acss2l (ENSTNIG00000014861)	MTCL1 (ENSTNIG00000014860)	rab12 (ENSTNIG00000014859)	napgb (ENSTNIG00000014858)	PIEZO2 (ENSTNIG00000014857)	ENSTNIG00000014856	mppe1 (ENSTNIG00000014855)	ENSTNIG00000014854	tmem14cb (ENSTNIG00000014853)	pak1ip1 (ENSTNIG00000014852)	si:dkey-222f8.3 (ENSTNIG00000014851)	CC2D1B (ENSTNIG00000014850)	ENSTNIG00000001013	ift22 (ENSTNIG00000014849)	ENSTNIG00000014848 #22	ENSTNIG00000014847 #31	ssx2ipa (ENSTNIG00000014846) #34	ENSTNIG00000014845	gpt (ENSTNIG00000014844)	c1ql3b (ENSTNIG00000014843)	pter (ENSTNIG00000014842)	ENSTNIG00000014841	egfra (ENSTNIG00000014840)	npc1 (ENSTNIG00000014839)	cables1 (ENSTNIG00000014838)	gata6 (ENSTNIG00000014837)	mib1 (ENSTNIG00000014836)	abhd3 (ENSTNIG00000004371)	greb1l (ENSTNIG00000008470)	rock1 (ENSTNIG00000008471)
Eupecaria_A	ANCESTRAL SPECIES	8	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Eupecaria_B	ANCESTRAL SPECIES	8	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00390000011926	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Perciformes	ANCESTRAL SPECIES	5	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00390000011926	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000174275	ENSGT00940000171007	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Cottioidei	ANCESTRAL SPECIES	22	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00650000094871	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Stickleback	MODERN SPECIES	2	adcyap1r1a (ENSGACG00000017184)	ghrhra (ENSGACG00000017188)	eef1da (ENSGACG00000017191)	ENSGACG00000017194	ftr67 (ENSGACG00000017196)	si:ch73-52e5.2 (ENSGACG00000017198)	them6 (ENSGACG00000017202)	ENSGACG00000017203	ENSGACG00000017205	ENSGACG00000017207	zgc:113531 (ENSGACG00000017210)	b4galt2 (ENSGACG00000017213)	atp6v0b (ENSGACG00000017215)	ENSGACG00000017220	ift22 (ENSGACG00000017224)	ENSGACG00000017229 #22	CCN1 (ENSGACG00000017235) #25	ENSGACG00000017241	MCOLN3 (ENSGACG00000017244) #31	ssx2ipa (ENSGACG00000017260) #34	gng5 (ENSGACG00000017269) #37	ENSGACG00000017270	gpt (ENSGACG00000017272)	c1ql3b (ENSGACG00000017280)	pter (ENSGACG00000017282)	pter (ENSGACG00000017284)	MMP16 (ENSGACG00000017287)	egfra (ENSGACG00000017289)	npc1 (ENSGACG00000017295)	cables1 (ENSGACG00000017298)	gata6 (ENSGACG00000017300)
Lumpfish	MODERN SPECIES	8	ENSCLMG00005013209	ENSCLMG00005013207	ENSCLMG00005013206	ENSCLMG00005013204	si:ch73-52e5.2 (ENSCLMG00005013203)	them6 (ENSCLMG00005013200)	ENSCLMG00005013199	zgc:113531 (ENSCLMG00005013195)	ENSCLMG00005013191	ENSCLMG00005013190	b4galt2 (ENSCLMG00005013188)	atp6v0b (ENSCLMG00005013186)	kiss1ra (ENSCLMG00005013138)	ENSCLMG00005013137	ift22 (ENSCLMG00005013135)	ENSCLMG00005013133 #22	ENSCLMG00005013132	ssx2ipa (ENSCLMG00005013130) #34	gng5 (ENSCLMG00005013126) #37	ENSCLMG00005013123	gpt (ENSCLMG00005013122)	c1ql3b (ENSCLMG00005013121)	pter (ENSCLMG00005013120)	ENSCLMG00005013118	MMP16 (ENSCLMG00005012722)	egfra (ENSCLMG00005007428)	npc1 (ENSCLMG00005002136)	cables1 (ENSCLMG00005001909)	usp14 (ENSCLMG00005001846)	thoc1 (ENSCLMG00005001824)	aqp1a.1 (ENSCLMG00005001820)
Perciformes_a	ANCESTRAL SPECIES	17	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00390000011926	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000013187	ENSGT00390000009724.d	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000155969.z	ENSGT00940000171007	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781
Channel bull blenny	MODERN SPECIES	8	ghrhra (ENSCGOG00000016014)	eef1da (ENSCGOG00000016025)	ENSCGOG00000016048	ftr67 (ENSCGOG00000016051)	si:ch73-52e5.2 (ENSCGOG00000016053)	them6 (ENSCGOG00000016056)	ENSCGOG00000016057	ENSCGOG00000016064	ENSCGOG00000016069	zgc:113531 (ENSCGOG00000016072)	b4galt2 (ENSCGOG00000016078)	atp6v0b (ENSCGOG00000016119)	kiss1ra (ENSCGOG00000016154)	ift22 (ENSCGOG00000016458)	atp5l (ENSCGOG00000016459)	ENSCGOG00000016461 #22	CCN1 (ENSCGOG00000016472) #25	ENSCGOG00000016577	MCOLN3 (ENSCGOG00000016579) #31	ssx2ipa (ENSCGOG00000016602) #34	gpt (ENSCGOG00000016626)	pter (ENSCGOG00000016713)	ENSCGOG00000016716	ENSCGOG00000016721	MMP16 (ENSCGOG00000016739)	egfra (ENSCGOG00000017349)	npc1 (ENSCGOG00000020921)	cables1 (ENSCGOG00000022226)	gata6 (ENSCGOG00000022247)	mib1 (ENSCGOG00000022254)	abhd3 (ENSCGOG00000022364)
Pike perch	MODERN SPECIES	12	adcyap1r1a (ENSSLUG00000002762)	ghrhra (ENSSLUG00000004239)	eef1da (ENSSLUG00000004260)	ENSSLUG00000004291	ftr67 (ENSSLUG00000004299)	si:ch73-52e5.2 (ENSSLUG00000004307)	them6 (ENSSLUG00000004315)	ENSSLUG00000004321	ENSSLUG00000004331	ENSSLUG00000004336	zgc:113531 (ENSSLUG00000004345)	b4galt2 (ENSSLUG00000004359)	atp6v0b (ENSSLUG00000004369)	kiss1ra (ENSSLUG00000004416)	ift22 (ENSSLUG00000004598)	ENSSLUG00000004608 #22	CCN1 (ENSSLUG00000004622) #25	ENSSLUG00000004648	MCOLN3 (ENSSLUG00000004665) #31	ssx2ipa (ENSSLUG00000004817) #34	gpt (ENSSLUG00000004943)	c1ql3b (ENSSLUG00000007687)	pter (ENSSLUG00000007691)	ENSSLUG00000007702	MMP16 (ENSSLUG00000007793)	egfra (ENSSLUG00000009096)	npc1 (ENSSLUG00000014852)	cables1 (ENSSLUG00000016013)	gata6 (ENSSLUG00000016073)	mib1 (ENSSLUG00000016102)	abhd3 (ENSSLUG00000016127)
Eupecaria_C	ANCESTRAL SPECIES	10	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00390000011926	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	8	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00390000011926	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000155969.z	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
European seabass	MODERN SPECIES		ENSDLAG00005028182	ENSDLAG00005020407	adcyap1r1a (ENSDLAG00005019506)	ghrhra (ENSDLAG00005019446)	eef1da (ENSDLAG00005019391)	ENSDLAG00005019441	them6 (ENSDLAG00005026753)	ENSDLAG00005019417	zgc:113531 (ENSDLAG00005026544)	ENSDLAG00005029420	b4galt2 (ENSDLAG00005032644)	atp6v0b (ENSDLAG00005031838)	kiss1ra (ENSDLAG00005019344)	ENSDLAG00005028004	ENSDLAG00005019330	ENSDLAG00005019320 #22	ENSDLAG00005019317 #25	ENSDLAG00005018995 #31	ENSDLAG00005018928 #34	ENSDLAG00005030633	pter (ENSDLAG00005017588)	gpt (ENSDLAG00005017638)	ENSDLAG00005034659	ENSDLAG00005029333	ENSDLAG00005016848	egfra (ENSDLAG00005012486)	npc1 (ENSDLAG00005011147)	cables1 (ENSDLAG00005010904)	GATA6 (ENSDLAG00005010866)	mib1 (ENSDLAG00005010773)	ABHD3 (ENSDLAG00005031659)
Large yellow croaker	MODERN SPECIES	1	eef1da (ENSLCRG00005009769)	ENSLCRG00005009781	ftr67 (ENSLCRG00005009783)	si:ch73-52e5.2 (ENSLCRG00005009784)	them6 (ENSLCRG00005009785)	ENSLCRG00005009786	ENSLCRG00005009790	zgc:113531 (ENSLCRG00005009792)	b4galt2 (ENSLCRG00005009793)	ENSLCRG00005009796	atp6v0b (ENSLCRG00005009798)	ENSLCRG00005009802	kiss1ra (ENSLCRG00005009810)	atp5l (ENSLCRG00005009868)	ift22 (ENSLCRG00005009871)	ENSLCRG00005009879 #22	CCN1 (ENSLCRG00005009886) #25	ENSLCRG00005009887	MCOLN3 (ENSLCRG00005009894) #31	ssx2ipa (ENSLCRG00005011018) #34	gng5 (ENSLCRG00005011019) #37	gpt (ENSLCRG00005011032)	ENSLCRG00005012401	pter (ENSLCRG00005012403)	ENSLCRG00005012405	ENSLCRG00005012406	ENSLCRG00005012408	MMP16 (ENSLCRG00005012415)	egfra (ENSLCRG00005012869)	npc1 (ENSLCRG00005017948)	cables1 (ENSLCRG00005018182)
Gilthead seabream	MODERN SPECIES	13	pacap1A (ENSSAUG00010010329)	ghrhra (ENSSAUG00010011288)	eef1da (ENSSAUG00010011296)	ENSSAUG00010011313	ftr67 (ENSSAUG00010011317)	si:ch73-52e5.2 (ENSSAUG00010011322)	them6 (ENSSAUG00010011325)	ENSSAUG00010011328	ENSSAUG00010011333	zgc:113531 (ENSSAUG00010011336)	b4galt2 (ENSSAUG00010011338)	atp6v0b (ENSSAUG00010011339)	kiss1ra (ENSSAUG00010011346)	ATP5L (ENSSAUG00010011394)	ift22 (ENSSAUG00010011397)	ENSSAUG00010011400 #22	CCN1 (ENSSAUG00010011403) #25	ENSSAUG00010011404	MCOLN3 (ENSSAUG00010011412) #31	ssx2ipa (ENSSAUG00010012271) #34	gpt (ENSSAUG00010012281)	c1ql3b (ENSSAUG00010012494)	pter (ENSSAUG00010012497)	ENSSAUG00010012499	ENSSAUG00010012502	ENSSAUG00010012503	ENSSAUG00010012504	ENSSAUG00010012505	ENSSAUG00010012508	MMP16 (ENSSAUG00010012528)	egfra (ENSSAUG00010013638)
Ovalentaria	ANCESTRAL SPECIES	5	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000013187	ENSGT00940000177599	ENSGT00390000009724.d	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Ovalentaria_B	ANCESTRAL SPECIES	6	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000013187	ENSGT00940000177599	ENSGT00390000009724.d	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Pomacentridae	ANCESTRAL SPECIES	6					ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT01090000260051.a	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00390000006960	ENSGT00940000161639.f	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Pomacentridae_A	ANCESTRAL SPECIES	5				ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00390000011926	ENSGT00980000202693	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT01090000260051.a	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000161639.f	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Amphiprion	ANCESTRAL SPECIES	35						ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00980000202693	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000013187	ENSGT00390000009724.d	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00390000006960	ENSGT00940000161639.f	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781
Clown anemonefish	MODERN SPECIES	766													ENSAOCG00000011383	atp5l (ENSAOCG00000011344)	ift22 (ENSAOCG00000011321)	ENSAOCG00000011296 #22	CCN1 (ENSAOCG00000011277) #25	ENSAOCG00000011263	MCOLN3 (ENSAOCG00000011251) #31	ssx2ipa (ENSAOCG00000011220) #34	gng5 (ENSAOCG00000011192) #37	gpt (ENSAOCG00000011170)
Orange clownfish	MODERN SPECIES	1	ENSAPEG00000024657	si:ch73-52e5.2 (ENSAPEG00000024663)	them6 (ENSAPEG00000024665)	ENSAPEG00000024666	si:ch73-52e5.2 (ENSAPEG00000024668)	them6 (ENSAPEG00000024670)	ENSAPEG00000024671	ENSAPEG00000024680	zgc:113531 (ENSAPEG00000024683)	b4galt2 (ENSAPEG00000024686)	atp6v0b (ENSAPEG00000024689)	ENSAPEG00000024699	ENSAPEG00000024704	ift22 (ENSAPEG00000024719)	atp5l (ENSAPEG00000024723)	ENSAPEG00000024729 #22	CCN1 (ENSAPEG00000024748) #25	ENSAPEG00000024783	MCOLN3 (ENSAPEG00000024784) #31	ssx2ipa (ENSAPEG00000024786) #34	gng5 (ENSAPEG00000024788) #37	gpt (ENSAPEG00000024792)	pter (ENSAPEG00000024796)	c1ql3b (ENSAPEG00000024799)	ENSAPEG00000024800	ENSAPEG00000024801	egfra (ENSAPEG00000024805)	npc1 (ENSAPEG00000024811)	cables1 (ENSAPEG00000024815)	gata6 (ENSAPEG00000000319)	mib1 (ENSAPEG00000000381)
Spiny chromis	MODERN SPECIES	98						si:ch73-52e5.2 (ENSAPOG00000013079)	them6 (ENSAPOG00000013093)	ENSAPOG00000013120	ENSAPOG00000013134	zgc:113531 (ENSAPOG00000013152)	b4galt2 (ENSAPOG00000013158)	atp6v0b (ENSAPOG00000013210)	ENSAPOG00000013245	atp5l (ENSAPOG00000013367)	ift22 (ENSAPOG00000013406)	ENSAPOG00000013424 #22	CCN1 (ENSAPOG00000013435) #25	ENSAPOG00000013447	MCOLN3 (ENSAPOG00000013507) #31	ssx2ipa (ENSAPOG00000013519) #34	gng5 (ENSAPOG00000013595) #37	ENSAPOG00000013610	gpt (ENSAPOG00000013665)	c1ql3b (ENSAPOG00000000372)	pter (ENSAPOG00000013703)	ENSAPOG00000013723	ENSAPOG00000013730	ENSAPOG00000013788	ENSAPOG00000013805	egfra (ENSAPOG00000013926)	npc1 (ENSAPOG00000014041)
Cichlidae	ANCESTRAL SPECIES	2	ENSGT00940000154044.a.a.q.b	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781
Pseudocrenilabrinae	ANCESTRAL SPECIES	7	ENSGT00940000154044.a.a.q.b	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781
Nile tilapia	MODERN SPECIES	9	ghrhra (ENSONIG00000009284)	eef1da (ENSONIG00000009294)	ENSONIG00000009298	ftr67 (ENSONIG00000035036)	si:ch73-52e5.2 (ENSONIG00000009303)	them6 (ENSONIG00000009304)	ENSONIG00000039246	ENSONIG00000009305	zgc:113531 (ENSONIG00000035884)	b4galt2 (ENSONIG00000009307)	atp6v0b (ENSONIG00000041659)	ENSONIG00000035169	gpr54 (ENSONIG00000009314)	atp5l (ENSONIG00000038775)	ift22 (ENSONIG00000009316)	ENSONIG00000009320 #22	CCN1 (ENSONIG00000009325) #25	ENSONIG00000009330	MCOLN3 (ENSONIG00000009331) #31	ssx2ipa (ENSONIG00000009335) #34	gpt (ENSONIG00000009338)	ENSONIG00000031519	pter (ENSONIG00000009349)	ENSONIG00000037694	ENSONIG00000009351	egfra (ENSONIG00000009358)	npc1 (ENSONIG00000009389)	cables1 (ENSONIG00000009402)	gata6 (ENSONIG00000009406)	mib1 (ENSONIG00000009408)	abhd3 (ENSONIG00000042555)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT00940000154044.a.a.q.b	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781	ENSGT00950000182902.a.c
Haplochromini	ANCESTRAL SPECIES	2	ENSGT00940000154044.a.a.q.b	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781	ENSGT00950000182902.a.c
Burton s mouthbrooder	MODERN SPECIES	271	ghrhra (ENSHBUG00000011095)	eef1da (ENSHBUG00000011015)	ENSHBUG00000010986	ftr67 (ENSHBUG00000010975)	si:ch73-52e5.2 (ENSHBUG00000010958)	them6 (ENSHBUG00000010952)	ENSHBUG00000010936	ENSHBUG00000010918	zgc:113531 (ENSHBUG00000010909)	b4galt2 (ENSHBUG00000010889)	atp6v0b (ENSHBUG00000010871)	ENSHBUG00000010849	ENSHBUG00000010842	ift22 (ENSHBUG00000010825)	atp5l (ENSHBUG00000010805)	ENSHBUG00000010786 #22	CCN1 (ENSHBUG00000010766) #25	ENSHBUG00000010760	MCOLN3 (ENSHBUG00000010753) #31	ssx2ipa (ENSHBUG00000010670) #34	gng5 (ENSHBUG00000010657) #37	gpt (ENSHBUG00000010601)	c1ql3b (ENSHBUG00000010579)	pter (ENSHBUG00000010572)	ENSHBUG00000010537	egfra (ENSHBUG00000000276)	egfra (ENSHBUG00000010288)	npc1 (ENSHBUG00000009932)	cables1 (ENSHBUG00000009830)	gata6 (ENSHBUG00000009762)	mib1 (ENSHBUG00000009719)
Atherinomorphae	ANCESTRAL SPECIES	4	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Cyprinodontiformes	ANCESTRAL SPECIES	5	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275.a	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Aplocheiloidei	ANCESTRAL SPECIES	11	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000174275.a	ENSGT00940000175258	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Mangrove rivulus	MODERN SPECIES	88		ghrhra (ENSKMAG00000002539)	eef1da (ENSKMAG00000002571)	ENSKMAG00000002600	ftr67 (ENSKMAG00000002621)	si:ch73-52e5.2 (ENSKMAG00000002629)	them6 (ENSKMAG00000002646)	ENSKMAG00000002659	ENSKMAG00000002682	zgc:113531 (ENSKMAG00000002692)	b4galt2 (ENSKMAG00000002711)	atp6v0b (ENSKMAG00000002743)	kiss1ra (ENSKMAG00000002766)	atp5l (ENSKMAG00000002804)	ift22 (ENSKMAG00000002821)	ENSKMAG00000002857 #22	CCN1 (ENSKMAG00000002875) #25	ENSKMAG00000002888	MCOLN3 (ENSKMAG00000002903) #31	ssx2ipa (ENSKMAG00000002914) #34	gng5 (ENSKMAG00000002924) #37	gpt (ENSKMAG00000002940)	c1ql3b (ENSKMAG00000002997)	pter (ENSKMAG00000003007)	ENSKMAG00000003029	ENSKMAG00000003041	MMP16 (ENSKMAG00000003052)	egfra (ENSKMAG00000003098)	npc1 (ENSKMAG00000003221)	cables1 (ENSKMAG00000003333)	gata6 (ENSKMAG00000003401)
Turquoise killifish	MODERN SPECIES	1618	FYCO1 (ENSNFUG00015014999)	adcyap1r1a (ENSNFUG00015015356)	ENSNFUG00015018779	ghrhra (ENSNFUG00015018788)	eef1da (ENSNFUG00015018822)	ENSNFUG00015018853	FTR67 (ENSNFUG00015018859)	THEM6 (ENSNFUG00015018861)	them6 (ENSNFUG00015018862)	ENSNFUG00015018864	OLA.3245 (ENSNFUG00015018866)	B4GALT2 (ENSNFUG00015018867)	ATP6V0B (ENSNFUG00015018873)	ENSNFUG00015018892	RABL5 (ENSNFUG00015019042)	ENSNFUG00015019049 #22	BCL10 (ENSNFUG00015019135)	MCOLN3 (ENSNFUG00015019147) #31	ENSNFUG00015019169	ssx2ipa (ENSNFUG00015019174) #34	gng5 (ENSNFUG00015019186) #37	GPT2L (ENSNFUG00015019233)	C1QL3B (ENSNFUG00015019544)	PTER (ENSNFUG00015019546)	ENSNFUG00015019552	MMP16 (ENSNFUG00015019562)	ENSNFUG00015019653	EGFRA (ENSNFUG00015019746)	NPC1 (ENSNFUG00015020612)	CABLES1 (ENSNFUG00015022015)	gata6 (ENSNFUG00015009079)
Cyprinodontoidei	ANCESTRAL SPECIES	2	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275.a	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
NAME_4	ANCESTRAL SPECIES	19	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000155969.z	ENSGT00390000006960	ENSGT00940000174275.a	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781
Mummichog	MODERN SPECIES	340									ENSFHEG00000000814	zgc:113531 (ENSFHEG00000017654)	b4galt2 (ENSFHEG00000017678)	atp6v0b (ENSFHEG00000017700)	ENSFHEG00000017726	atp5l (ENSFHEG00000017734)	ift22 (ENSFHEG00000017749)	ENSFHEG00000017771 #22	ENSFHEG00000017783	ENSFHEG00000017814 #31	ssx2ipa (ENSFHEG00000017822) #34	gng5 (ENSFHEG00000017832) #37	gpt (ENSFHEG00000017864)	ENSFHEG00000017872	pter (ENSFHEG00000017882)
Sheepshead minnow	MODERN SPECIES	151	FYCO1 (ENSCVAG00000001527)	adcyap1r1a (ENSCVAG00000001495)	ghrhra (ENSCVAG00000000057)	eef1da (ENSCVAG00000001484)	ENSCVAG00000001481	ftr67 (ENSCVAG00000001474)	si:ch73-52e5.2 (ENSCVAG00000001470)	them6 (ENSCVAG00000001466)	ENSCVAG00000001460	zgc:113531 (ENSCVAG00000001453)	b4galt2 (ENSCVAG00000001450)	atp6v0b (ENSCVAG00000023279)	kiss1ra (ENSCVAG00000023196)	atp5l (ENSCVAG00000021486)	ift22 (ENSCVAG00000021464)	ENSCVAG00000021443 #22	CCN1 (ENSCVAG00000021432) #25	ENSCVAG00000021414	MCOLN3 (ENSCVAG00000021404) #31	ssx2ipa (ENSCVAG00000021394) #34	gng5 (ENSCVAG00000021380) #37	gpt (ENSCVAG00000021375)	ENSCVAG00000000906	pter (ENSCVAG00000021292)	ENSCVAG00000021268	ENSCVAG00000021260	ENSCVAG00000021255	MMP16 (ENSCVAG00000021234)	egfra (ENSCVAG00000021165)	npc1 (ENSCVAG00000021015)	cables1 (ENSCVAG00000020905)
Poeciliinae	ANCESTRAL SPECIES	6	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275.a	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a
Poecilia	ANCESTRAL SPECIES	16	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781
NAME_6	ANCESTRAL SPECIES	11	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000166520.g.a	ENSGT00940000167115	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000009724.d	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781	ENSGT00950000182902.a.c
Amazon molly	MODERN SPECIES	279	eef1da (ENSPFOG00000007178)	ENSPFOG00000024279	ftr67 (ENSPFOG00000007238)	si:ch73-52e5.2 (ENSPFOG00000007330)	them6 (ENSPFOG00000007342)	ENSPFOG00000007363	ENSPFOG00000007383	ENSPFOG00000007394	ENSPFOG00000023009	zgc:113531 (ENSPFOG00000007405)	b4galt2 (ENSPFOG00000007417)	atp6v0b (ENSPFOG00000007507)	kiss1ra (ENSPFOG00000007593)	atp5l (ENSPFOG00000007667)	ift22 (ENSPFOG00000007671)	ENSPFOG00000007681 #22	CCN1 (ENSPFOG00000007887) #25	ENSPFOG00000007917	MCOLN3 (ENSPFOG00000007926) #31	ssx2ipa (ENSPFOG00000008251) #34	ENSPFOG00000020358	gpt (ENSPFOG00000008454)	c1ql3b (ENSPFOG00000008622)	pter (ENSPFOG00000008635)	ENSPFOG00000023888	ENSPFOG00000024737	ENSPFOG00000008665	egfra (ENSPFOG00000008848)	npc1 (ENSPFOG00000009741)	cables1 (ENSPFOG00000010280)	gata6 (ENSPFOG00000010361)
Sailfin molly	MODERN SPECIES	1014													kiss1ra (ENSPLAG00000017238)	atp5l (ENSPLAG00000016664)	ift22 (ENSPLAG00000016651)	ENSPLAG00000016636 #22	CCN1 (ENSPLAG00000016624) #25	ENSPLAG00000016576	MCOLN3 (ENSPLAG00000016563) #31	ssx2ipa (ENSPLAG00000016525) #34	gpt (ENSPLAG00000016506)	ENSPLAG00000016461	c1ql3b (ENSPLAG00000016452)	pter (ENSPLAG00000016436)	MMP16 (ENSPLAG00000016425)
Oryzias	ANCESTRAL SPECIES	12	ENSGT01090000260052.a.a.a.a	ENSGT01090000260052.a.b.i	ENSGT00940000154044.a.a.q.b	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814	ENSGT00940000156781
Oryzias_b	ANCESTRAL SPECIES	8	ENSGT01090000260052.a.a.a.a	ENSGT01090000260052.a.b.i	ENSGT00940000154044.a.a.q.b	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00940000157017.b	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.h.a.a.b.a.b.a.b.b.a.b	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Indian medaka	MODERN SPECIES	10	ENSOMEG00000010383	XCR1 (ENSOMEG00000010372)	adcyap1r1a (ENSOMEG00000010346)	ghrhra (ENSOMEG00000010243)	eef1da (ENSOMEG00000010166)	ftr67 (ENSOMEG00000010124)	si:ch73-52e5.2 (ENSOMEG00000010102)	them6 (ENSOMEG00000010087)	zgc:113531 (ENSOMEG00000010066)	ENSOMEG00000010046	ENSOMEG00000010024	b4galt2 (ENSOMEG00000009955)	atp6v0b (ENSOMEG00000009906)	kiss1ra (ENSOMEG00000009876)	ift22 (ENSOMEG00000009847)	ENSOMEG00000009810 #22	ENSOMEG00000009723	ENSOMEG00000009704 #31	ssx2ipa (ENSOMEG00000009644) #34	gng5 (ENSOMEG00000009602) #37	gpt (ENSOMEG00000009590)	c1ql3b (ENSOMEG00000009524)	ENSOMEG00000009505	ENSOMEG00000009490	ENSOMEG00000009477	ENSOMEG00000009466	ENSOMEG00000009450	MMP16 (ENSOMEG00000009412)	egfra (ENSOMEG00000009323)	ENSOMEG00000009224	ENSOMEG00000009204
Javanese ricefish	MODERN SPECIES	8	ENSOJAG00000017315	XCR1 (ENSOJAG00000017308)	FYCO1 (ENSOJAG00000017302)	adcyap1r1a (ENSOJAG00000015747)	ghrhra (ENSOJAG00000015482)	eef1da (ENSOJAG00000015417)	ENSOJAG00000015408	ftr67 (ENSOJAG00000015404)	si:ch73-52e5.2 (ENSOJAG00000015399)	them6 (ENSOJAG00000015388)	zgc:113531 (ENSOJAG00000015380)	b4galt2 (ENSOJAG00000015360)	atp6v0b (ENSOJAG00000015343)	kiss1ra (ENSOJAG00000015294)	ift22 (ENSOJAG00000015286)	ENSOJAG00000015271 #22	ENSOJAG00000015265	ENSOJAG00000015132 #31	ssx2ipa (ENSOJAG00000015119) #34	gpt (ENSOJAG00000014432)	mib1 (ENSOJAG00000014334)	abhd3 (ENSOJAG00000014305)	greb1l (ENSOJAG00000013658)	usp14 (ENSOJAG00000011584)	thoc1 (ENSOJAG00000011460)	aqp1a.1 (ENSOJAG00000011393)	CRHR2 (ENSOJAG00000009920)	myl13 (ENSOJAG00000009786)	pth1r (ENSOJAG00000009615)	tmie (ENSOJAG00000009593)	ENSOJAG00000022860
Oryzias_a	ANCESTRAL SPECIES	7	ENSGT00940000156146.`b.b	ENSGT00940000155331.A.f	ENSGT00940000159827.e	ENSGT00940000154044.a.a.q.b	ENSGT00940000157362.c	ENSGT00940000167394	ENSGT00950000183014.f.b.b.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.b	ENSGT00390000004859.c	ENSGT00390000004859.d	ENSGT00940000165869	ENSGT00940000159367	ENSGT00550000075120	ENSGT00390000013187	ENSGT00530000063497.b #22	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00390000010727	ENSGT00940000161639.f	ENSGT00940000155265.a.g	ENSGT00390000006960.j	ENSGT00940000155969.z	ENSGT00390000006960.i	ENSGT00940000171007	ENSGT00940000174275	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182
Japanese Medaka HdrR	MODERN SPECIES	8	ENSORLG00000030253	viml (ENSORLG00000017812)	adcyap1r1a (ENSORLG00000017774)	ghrhra (ENSORLG00000017759)	eef1da (ENSORLG00000017750)	ENSORLG00000026690	ftr67 (ENSORLG00000017746)	ENSORLG00000017741	them6 (ENSORLG00000030364)	zgc:113531 (ENSORLG00000017737)	ENSORLG00000024822	b4galt2 (ENSORLG00000027171)	atp6v0b (ENSORLG00000017733)	ENSORLG00000028224	ift22 (ENSORLG00000017728)	ENSORLG00000017726 #22	ENSORLG00000027519	MCOLN3 (ENSORLG00000017722) #31	ssx2ipa (ENSORLG00000017720) #34	gng5 (ENSORLG00000027348) #37	gpt (ENSORLG00000017713)	pter (ENSORLG00000030197)	ENSORLG00000021841	pter (ENSORLG00000017708)	ENSORLG00000028591	ENSORLG00000017707	ENSORLG00000017706	ENSORLG00000027837	ENSORLG00000017703	egfra (ENSORLG00000017692)	npc1 (ENSORLG00000017682)
Pinecone sodierfish	MODERN SPECIES	8	eef1da (ENSMMDG00005012065)	ENSMMDG00005012055	ftr67 (ENSMMDG00005012052)	si:ch73-52e5.2 (ENSMMDG00005012048)	them6 (ENSMMDG00005012044)	ENSMMDG00005012041	ENSMMDG00005012039	zgc:113531 (ENSMMDG00005012036)	b4galt2 (ENSMMDG00005012034)	atp6v0b (ENSMMDG00005012032)	ENSMMDG00005012029	ENSMMDG00005012027	kiss1ra (ENSMMDG00005012022)	atp5l (ENSMMDG00005012015)	ift22 (ENSMMDG00005012012)	ENSMMDG00005012010 #22	CCN1 (ENSMMDG00005011996) #25	ENSMMDG00005011990	MCOLN3 (ENSMMDG00005011973) #31	ssx2ipa (ENSMMDG00005011957) #34	gng5 (ENSMMDG00005011955) #37	ENSMMDG00005011951	gpt (ENSMMDG00005010422)	c1ql3b (ENSMMDG00005010383)	pter (ENSMMDG00005010379)	ACOT11 (ENSMMDG00005010372)	mrpl37 (ENSMMDG00005010367)	blvra (ENSMMDG00005010362)	ENSMMDG00005010360	tox (ENSMMDG00005010357)	cryz (ENSMMDG00005010355)
Cod	MODERN SPECIES	21	fgf12a (ENSGMOG00000030127)	ENSGMOG00000006004	ENSGMOG00000016085	ENSGMOG00000005927	eef1da (ENSGMOG00000033143)	ENSGMOG00000005987	ftr67 (ENSGMOG00000005975)	si:ch73-52e5.2 (ENSGMOG00000005967)	them6 (ENSGMOG00000005963)	ENSGMOG00000034723	ENSGMOG00000035831	b4galt2 (ENSGMOG00000034489)	atp6v0b (ENSGMOG00000000295)	kiss1ra (ENSGMOG00000011215)	ENSGMOG00000011221	ENSGMOG00000011229 #22	ENSGMOG00000011246 #25	ENSGMOG00000002533	ENSGMOG00000011255 #31	ssx2ipa (ENSGMOG00000011267) #34	ENSGMOG00000011277 #37	ENSGMOG00000026831	gpt (ENSGMOG00000011289)	c1ql3b (ENSGMOG00000031744)	pter (ENSGMOG00000022435)	ENSGMOG00000031589	ENSGMOG00000011307	egfra (ENSGMOG00000011316)	npc1 (ENSGMOG00000011338)	cables1 (ENSGMOG00000024238)	GATA6 (ENSGMOG00000011374)
Protacanthopterygii	ANCESTRAL SPECIES	14	ENSGT00530000063187.B.d	ENSGT00940000155091.eb.b	ENSGT00390000011644	ENSGT00940000162061.a.b	ENSGT01000000214434.F	ENSGT00940000164279.a	ENSGT00940000158561.b	ENSGT00940000158056	ENSGT00390000013502.a.b	ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d	ENSGT00530000063790.a.b	ENSGT00530000063497.b #22	ENSGT00940000155151.b.e #25	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT01100000263525.a.b.b.i #37	ENSGT00530000063936.b	ENSGT00390000010727	ENSGT00940000155265.a.g	ENSGT00940000161639.f	ENSGT00390000006960	ENSGT00940000157532.b	ENSGT00940000155450.c	ENSGT00940000156182	ENSGT00400000022086.a	ENSGT00940000160814
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	86																ENSGT00530000063497.b.g #22	ENSGT00940000155151.b.e.b #25	ENSGT00940000165852.e.b	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b.c #34	ENSGT01100000263525.a.b.b.i.b #37	ENSGT00530000063936.b.k	ENSGT00940000155265.a.g.e	ENSGT00390000006960.k.a	ENSGT00940000157532.b.c	ENSGT00940000155450.c.e	ENSGT00940000156182.c	ENSGT00400000022086.a.i	ENSGT00940000160814.c	ENSGT00940000156781.i	ENSGT00950000182902.a.c.h
Huchen	MODERN SPECIES	1730																ENSHHUG00000039036 #22	CCN1 (ENSHHUG00000039065) #25	ENSHHUG00000039067	MCOLN3 (ENSHHUG00000039080) #31	ssx2ipa (ENSHHUG00000039170) #34	gng5 (ENSHHUG00000039214) #37	samd13 (ENSHHUG00000039250)	gpt (ENSHHUG00000039257)	pter (ENSHHUG00000039305)	MMP16 (ENSHHUG00000039324)
Salmoninae_a	ANCESTRAL SPECIES	6	ENSGT00940000158629.b	ENSGT00940000156259.a.b.c	ENSGT00390000008608.w	ENSGT00940000156906.j.a.b.f	ENSGT00530000063187.B.d.c	ENSGT00940000155091.eb.b.e	ENSGT00390000011644.f	ENSGT00940000162061.a.b.a	ENSGT00940000164279.a.d	ENSGT00940000158561.b.b	ENSGT00940000158056.w.a	ENSGT00390000013502.a.b.a	ENSGT00940000158038.c.b.e	ENSGT00940000160247	ENSGT00940000156450.d.c	ENSGT00530000063497.b.g #22	ENSGT00940000155151.b.e.b #25	ENSGT00940000165852.e.b	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b.c #34	ENSGT01100000263525.a.b.b.i.b #37	ENSGT00530000063936.b.k	ENSGT00940000155265.a.g.e	ENSGT00390000006960.k.a	ENSGT00940000157532.b.c	ENSGT00940000155450.c.e	ENSGT00940000156182.c	ENSGT00400000022086.a.i	ENSGT00940000160814.c	ENSGT00940000156781.i	ENSGT00950000182902.a.c.h
Salmo	ANCESTRAL SPECIES	5	ENSGT00940000156259.a.b.c	ENSGT00390000008608.w	ENSGT00940000156906.j.a.b.f	ENSGT00530000063187.B.d.c	ENSGT00940000155091.eb.b.e	ENSGT00390000011644.f	ENSGT00940000162061.a.b.a	ENSGT00990000212954	ENSGT00940000164279.a.d	ENSGT00940000158561.b.b	ENSGT00940000158056.w.a	ENSGT00390000013502.a.b.a	ENSGT00940000158038.c.b.e	ENSGT00940000160247	ENSGT00940000156450.d.c	ENSGT00530000063497.b.g #22	ENSGT00940000155151.b.e.b #25	ENSGT00940000165852.e.b	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b.c #34	ENSGT01100000263525.a.b.b.i.b #37	ENSGT00530000063936.b.k	ENSGT00940000155265.a.g.e	ENSGT00390000006960.k.a	ENSGT00940000157532.b.c	ENSGT00940000155450.c.e	ENSGT00940000156182.c	ENSGT00400000022086.a.i	ENSGT00940000160814.c	ENSGT00940000156781.i	ENSGT00950000182902.a.c.h
Atlantic salmon	MODERN SPECIES	22	ENSSSAG00000118110	ENSSSAG00000056352	ENSSSAG00000111359	ENSSSAG00000056342	ENSSSAG00000091694	ENSSSAG00000074152	ENSSSAG00000056295	ENSSSAG00000056286	ENSSSAG00000056279	ENSSSAG00000095493	ENSSSAG00000044653	ENSSSAG00000044398	ENSSSAG00000044367	ENSSSAG00000043705	ENSSSAG00000114826	ENSSSAG00000043659 #22	ENSSSAG00000043620 #25	ENSSSAG00000093107	ENSSSAG00000043019 #31	ssx2ipa (ENSSSAG00000042944) #34	ENSSSAG00000042924 #37	ENSSSAG00000083946	gpt (ENSSSAG00000041455)	pter (ENSSSAG00000041406)	ENSSSAG00000070317	egfra (ENSSSAG00000003786)	npc1 (ENSSSAG00000098085)	cables1 (ENSSSAG00000067532)	GATA6 (ENSSSAG00000117479)	ENSSSAG00000101686	mib1 (ENSSSAG00000001758)
River trout	MODERN SPECIES	24	PIK3R3 (ENSSTUG00000017697)	ENSSTUG00000017711	mgst3a (ENSSTUG00000017717)	ENSSTUG00000017746	angptl1b (ENSSTUG00000017758)	TADA1 (ENSSTUG00000017772)	JUN (ENSSTUG00000017794)	ENSSTUG00000017801	ENSSTUG00000017812	ENSSTUG00000017849	ENSSTUG00000018004	ENSSTUG00000018014	dab1b (ENSSTUG00000018087)	c8b (ENSSTUG00000018118)	PLPP3 (ENSSTUG00000018353)	ENSSTUG00000018362 #22	CCN1 (ENSSTUG00000018401) #25	ENSSTUG00000018411	MCOLN3 (ENSSTUG00000018415) #31	ssx2ipa (ENSSTUG00000036526) #34	gng5 (ENSSTUG00000036532) #37	samd13 (ENSSTUG00000036542)	gpt (ENSSTUG00000036576)	pter (ENSSTUG00000037164)	ENSSTUG00000037238	egfra (ENSSTUG00000038507)	npc1 (ENSSTUG00000043692)	cables1 (ENSSTUG00000045369)	gata6 (ENSSTUG00000045446)	mib1 (ENSSTUG00000045467)	abhd3 (ENSSTUG00000045743)
Oncorhynchus	ANCESTRAL SPECIES	15	ENSGT00940000158629.b	ENSGT00940000156259.a.b.c	ENSGT00390000008608.w	ENSGT00940000156906.j.a.b.f	ENSGT00530000063187.B.d.c	ENSGT00940000155091.eb.b.e	ENSGT00390000011644.f	ENSGT00940000162061.a.b.a	ENSGT00940000164279.a.d	ENSGT00940000158561.b.b	ENSGT00940000158056.w.a	ENSGT00390000013502.a.b.a	ENSGT00940000158038.c.b.e	ENSGT00940000160247	ENSGT00940000156450.d.c	ENSGT00530000063497.b.g #22	ENSGT00940000155151.b.e.b #25	ENSGT00940000165852.e.b	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b.c #34	ENSGT01100000263525.a.b.b.i.b #37	ENSGT00530000063936.b.k	ENSGT00940000155265.a.g.e	ENSGT00390000006960.k.a	ENSGT00940000157532.b.c	ENSGT00940000155450.c.e	ENSGT00940000156182.c	ENSGT00400000022086.a.i	ENSGT00940000160814.c	ENSGT00940000156781.i	ENSGT00950000182902.a.c.h
Rainbow trout	MODERN SPECIES	20	PIK3R3 (ENSOMYG00000025086)	ENSOMYG00000025099	ENSOMYG00000066833	ENSOMYG00000025123	ENSOMYG00000025177	ENSOMYG00000025352	ENSOMYG00000025367	ENSOMYG00000039739	ENSOMYG00000056615	ENSOMYG00000057463	ENSOMYG00000025422	ENSOMYG00000025486	ENSOMYG00000025647	c8b (ENSOMYG00000026179)	ENSOMYG00000026234	ENSOMYG00000026251 #22	ENSOMYG00000067261	ENSOMYG00000026273 #25	ENSOMYG00000026301	ENSOMYG00000026356 #31	ssx2ipa (ENSOMYG00000026433) #34	ENSOMYG00000026496 #37	ENSOMYG00000026541	gpt (ENSOMYG00000026867)	pter (ENSOMYG00000027588)	ENSOMYG00000027901	egfra (ENSOMYG00000030173)	npc1 (ENSOMYG00000032274)	cables1 (ENSOMYG00000036229)	GATA6 (ENSOMYG00000036255)	ENSOMYG00000069549
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00530000063497.b.g #22
Coho salmon	MODERN SPECIES	19	ENSOKIG00005021251	pik3r3a (ENSOKIG00005021261)	ENSOKIG00005021268	ENSOKIG00005021278	ANGPTL1 (ENSOKIG00005021318)	TADA1 (ENSOKIG00005021332)	JUN (ENSOKIG00005021371)	ENSOKIG00005021382	MYOC (ENSOKIG00005021442)	ENSOKIG00005021498	ENSOKIG00005021536	dab1b (ENSOKIG00005021618)	c8b (ENSOKIG00005021710)	PLPP3 (ENSOKIG00005022112)	ENSOKIG00005022128	ENSOKIG00005022145 #22	CCN1 (ENSOKIG00005022163) #25	MCOLN3 (ENSOKIG00005022215) #31	ssx2ipa (ENSOKIG00005022393) #34	ENSOKIG00005022449 #37	samd13 (ENSOKIG00005022468)	gpt (ENSOKIG00005022510)	pter (ENSOKIG00005022982)	ENSOKIG00005023057	egfra (ENSOKIG00005024025)	npc1 (ENSOKIG00005026101)	cables1 (ENSOKIG00005028814)	gata6 (ENSOKIG00005028891)	mib1 (ENSOKIG00005028928)	abhd3 (ENSOKIG00005029068)	greb1l (ENSOKIG00005029126)
Salmoninae	ANCESTRAL SPECIES	24	ENSGT00940000155091.eb.b.f	ENSGT00390000011644.e	ENSGT00940000162061.a.b.b	ENSGT01000000214434.F	ENSGT00940000164279.a.c	ENSGT00940000158561.b.a	ENSGT00940000158056.w.b	ENSGT00390000013502.a.b.b	ENSGT00940000158038.c.b.f	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d.d	ENSGT00940000166722.b	ENSGT00530000063790.a.b	ENSGT01030000234583.a.a.d.n	ENSGT00530000063497.b.h #22	ENSGT00940000155151.b.e.a #25	ENSGT00940000165852.e.a	ENSGT00390000007688.a.b.d #34	ENSGT01100000263525.a.b.b.i.a #37	ENSGT00530000063936.b.l	ENSGT00390000010727	ENSGT00940000155265.a.g.f	ENSGT00940000161639.f	ENSGT00390000006960.k.b	ENSGT00940000157532.b.d	ENSGT00940000155450.c.f	ENSGT00940000156182.d	ENSGT00400000022086.a.j	ENSGT00940000160814.d	ENSGT00940000156781.j
Salmoninae_a	ANCESTRAL SPECIES	2	ENSGT00530000063187.B.d.d	ENSGT00940000155091.eb.b.f	ENSGT00390000011644.e	ENSGT00940000162061.a.b.b	ENSGT01000000214434.F	ENSGT00940000164279.a.c	ENSGT00940000158561.b.a	ENSGT00940000158056.w.b	ENSGT00390000013502.a.b.b	ENSGT00940000158038.c.b.f	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d.d	ENSGT00940000166722.b	ENSGT00530000063790.a.b	ENSGT00530000063497.b.h #22	ENSGT00940000155151.b.e.a #25	ENSGT00940000165852.e.a	ENSGT00390000007688.a.b.d #34	ENSGT01100000263525.a.b.b.i.a #37	ENSGT00530000063936.b.l	ENSGT00390000010727	ENSGT00940000155265.a.g.f	ENSGT00940000161639.f	ENSGT00390000006960.k.b	ENSGT00940000157532.b.d	ENSGT00940000155450.c.f	ENSGT00940000156182.d	ENSGT00400000022086.a.j	ENSGT00940000160814.d	ENSGT00940000156781.j
Salmo	ANCESTRAL SPECIES	21	ENSGT00940000155091.eb.b.f	ENSGT00390000011644.e	ENSGT00940000162061.a.b.b	ENSGT01000000214434.F	ENSGT00940000164279.a.c	ENSGT00940000158561.b.a	ENSGT00940000158056.w.b	ENSGT00390000013502.a.b.b	ENSGT00940000177219.c	ENSGT00940000158038.c.b.f	ENSGT00940000160126	ENSGT00530000063460.A.a	ENSGT00940000156450.d.d	ENSGT00940000166722.b	ENSGT00530000063790.a.b	ENSGT00530000063497.b.h #22	ENSGT00940000155151.b.e.a #25	ENSGT00940000165852.e.a	ENSGT00390000007688.a.b.d #34	ENSGT01100000263525.a.b.b.i.a #37	ENSGT00530000063936.b.l	ENSGT00390000010727	ENSGT00940000155265.a.g.f	ENSGT00940000161639.f	ENSGT00390000006960.k.b	ENSGT00940000157532.b.d	ENSGT00940000155450.c.f	ENSGT00940000156182.d	ENSGT00400000022086.a.j	ENSGT00940000160814.d	ENSGT00940000156781.j
Atlantic salmon	MODERN SPECIES	5	ENSSSAG00000074169	angptl1b (ENSSSAG00000074155)	ENSSSAG00000103133	fggy (ENSSSAG00000073915)	ENSSSAG00000073907	ENSSSAG00000073905	ENSSSAG00000073788	ENSSSAG00000073756	ENSSSAG00000085043	DAB1 (ENSSSAG00000073733)	C8A (ENSSSAG00000073702)	ENSSSAG00000073690	PLPP3 (ENSSSAG00000073687)	ENSSSAG00000073677	ENSSSAG00000073680	ENSSSAG00000073668 #22	ENSSSAG00000073657 #25	ENSSSAG00000100121	ENSSSAG00000073650 #34	ENSSSAG00000073647 #37	fuz (ENSSSAG00000073645)	ENSSSAG00000073646	alat2 (ENSSSAG00000073540)	c1ql3b (ENSSSAG00000103157)	pter (ENSSSAG00000073517)	ENSSSAG00000039918	egfra (ENSSSAG00000067891)	npc1 (ENSSSAG00000092995)	ENSSSAG00000115680	cables1 (ENSSSAG00000117023)	GATA6 (ENSSSAG00000067528)
River trout	MODERN SPECIES	13	angptl1b (ENSSTUG00000028575)	TADA1 (ENSSTUG00000028560)	JUN (ENSSTUG00000028557)	fggy (ENSSTUG00000027818)	ENSSTUG00000027788	MYOC (ENSSTUG00000027782)	ENSSTUG00000027662	ENSSTUG00000027618	ENSSTUG00000027601	ENSSTUG00000027592	ENSSTUG00000027526	ENSSTUG00000027515	PLPP3 (ENSSTUG00000027499)	ENSSTUG00000027487	ENSSTUG00000027485	ENSSTUG00000027459 #22	CCN1 (ENSSTUG00000027451) #25	ENSSTUG00000027447	ssx2ipa (ENSSTUG00000027436) #34	gng5 (ENSSTUG00000027433) #37	samd13 (ENSSTUG00000027429)	ENSSTUG00000027426	gpt (ENSSTUG00000027166)	c1ql3b (ENSSTUG00000027145)	pter (ENSSTUG00000027131)	MMP16 (ENSSTUG00000026724)	egfra (ENSSTUG00000024704)	npc1 (ENSSTUG00000020952)	cables1 (ENSSTUG00000020712)	gata6 (ENSSTUG00000020669)	mib1 (ENSSTUG00000020173)
Huchen	MODERN SPECIES	921													ENSHHUG00000027191	ENSHHUG00000027185	ENSHHUG00000027178	ENSHHUG00000027155 #22	CCN1 (ENSHHUG00000027145) #25	ENSHHUG00000027142	ssx2ipa (ENSHHUG00000027132) #34	gng5 (ENSHHUG00000027097) #37	samd13 (ENSHHUG00000027091)	ENSHHUG00000027090	gpt (ENSHHUG00000027017)	c1ql3b (ENSHHUG00000027012)	pter (ENSHHUG00000027001)	MMP16 (ENSHHUG00000026955)	egfra (ENSHHUG00000026026)	npc1 (ENSHHUG00000025725)	cables1 (ENSHHUG00000025633)	gata6 (ENSHHUG00000025626)
Northern pike	MODERN SPECIES	2	ENSELUG00000003208	angptl1b (ENSELUG00000003190)	TADA1 (ENSELUG00000003178)	JUN (ENSELUG00000003166)	fggy (ENSELUG00000003153)	ENSELUG00000003134	MYOC (ENSELUG00000024633)	ENSELUG00000024630	ENSELUG00000024620	dab1b (ENSELUG00000024598)	c8b (ENSELUG00000024532)	C8A (ENSELUG00000024484)	ENSELUG00000024446	PLPP3 (ENSELUG00000001030)	ENSELUG00000024401	ENSELUG00000024381 #22	ENSELUG00000024366	ENSELUG00000024357 #31	ssx2ipa (ENSELUG00000024281) #34	gng5 (ENSELUG00000024260) #37	samd13 (ENSELUG00000024271)	ENSELUG00000024254	gpt (ENSELUG00000024247)	c1ql3b (ENSELUG00000024207)	pter (ENSELUG00000024191)	MMP16 (ENSELUG00000024178)	egfra (ENSELUG00000024112)	npc1 (ENSELUG00000024020)	cables1 (ENSELUG00000023949)	gata6 (ENSELUG00000023929)	mib1 (ENSELUG00000023912)
Otomorpha	ANCESTRAL SPECIES	231											ENSGT00940000156450.d	ENSGT00940000175752	ENSGT00940000160126	ENSGT00940000160247	ENSGT00940000158038.c.b	ENSGT00530000063497.b #22	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.s	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a
Otophysi	ANCESTRAL SPECIES																	ENSGT00530000063497.b #22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00530000063497.b #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00530000063497.b #22
Characoidei	ANCESTRAL SPECIES																	ENSGT00530000063497.b #22
Mexicana tetra	MODERN SPECIES	51			DSP (ENSAMXG00000001574)	ENSAMXG00000043050	ENSAMXG00000030224	ENSAMXG00000001626	ENSAMXG00000035986	ENSAMXG00000009741	ENSAMXG00000037889	ENSAMXG00000041566	ENSAMXG00000033322	ENSAMXG00000040630	ENSAMXG00000036257	ENSAMXG00000031654	ENSAMXG00000040964	ENSAMXG00000039584 #22	ENSAMXG00000034524	cyp8b1.2 (ENSAMXG00000019923)	gjc2 (ENSAMXG00000030957)	IPP (ENSAMXG00000019888)	guk1a (ENSAMXG00000033762)	zgc:63882 (ENSAMXG00000030163)	arf1 (ENSAMXG00000019845)	wnt3a (ENSAMXG00000031704)	ENSAMXG00000043569	eif2b5 (ENSAMXG00000019751)	ENSAMXG00000042968	DIS3L2 (ENSAMXG00000019663)	ENSAMXG00000041454	mier1b (ENSAMXG00000042200)	slc35d1b (ENSAMXG00000036976)
Clupeiformes	ANCESTRAL SPECIES	191								ENSGT00940000156450.d	ENSGT00530000063460.A.a	ENSGT00940000160126	ENSGT00940000160247	ENSGT00940000158038.c.b	ENSGT00950000182913.B.e	ENSGT00730000110988.wb.b.e	ENSGT00940000170421	ENSGT00530000063497.b #22	ENSGT00940000165852	ENSGT00950000183036.a.a.h #31	ENSGT00390000007688.a.b #34	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b
Denticle herring	MODERN SPECIES	14	rundc3b (ENSDCDG00000030056)	slc25a40 (ENSDCDG00000030052)	dbf4 (ENSDCDG00000030051)	ADAM22 (ENSDCDG00000026924)	ENSDCDG00000026841	PLPP3 (ENSDCDG00000026831)	ENSDCDG00000026827	C8A (ENSDCDG00000026826)	c8b (ENSDCDG00000026817)	dab1b (ENSDCDG00000026787)	rpe65a (ENSDCDG00000026226)	TMEM107 (ENSDCDG00000026220)	aurkb (ENSDCDG00000026219)	aurkb (ENSDCDG00000026218)	RNF11 (ENSDCDG00000026217)	ENSDCDG00000026215 #22	ENSDCDG00000026214	ENSDCDG00000026202 #31	ssx2ipa (ENSDCDG00000026191) #34	tubb2 (ENSDCDG00000026185)	slc22a23 (ENSDCDG00000026183)	DSP (ENSDCDG00000024080)	TNS3 (ENSDCDG00000022743)	IGFBP3 (ENSDCDG00000022153)	igfbp1b (ENSDCDG00000021949)	adcy1b (ENSDCDG00000021929)	SIRT5 (ENSDCDG00000021918)	tll1 (ENSDCDG00000020595)	cpe (ENSDCDG00000020360)	msmo1 (ENSDCDG00000020357)	KLHL2 (ENSDCDG00000020354)
Spotted gar	MODERN SPECIES	648	ENSLOCG00000017738	LRRC8C (ENSLOCG00000005018)	kyat3.2 (ENSLOCG00000005032) #10	gtf2b (ENSLOCG00000005057) #11	pkn2b (ENSLOCG00000005077) #12	ENSLOCG00000005089	lmo4b (ENSLOCG00000005105) #13	hs2st1a (ENSLOCG00000005135) #14	selenof (ENSLOCG00000005156) #15	sh3glb1a (ENSLOCG00000005187) #16	ENSLOCG00000005198 #20	ENSLOCG00000005206 #20	ENSLOCG00000005218 #21	clca1 (ENSLOCG00000005234) #20	ENSLOCG00000005252	ODF2L (ENSLOCG00000005283) #22	ENSLOCG00000005315 #23	ZNHIT6 (ENSLOCG00000005376) #24	ccn1 (ENSLOCG00000005392) #25	DDAH1 (ENSLOCG00000005404) #26	ENSLOCG00000005418	zgc:65873 (ENSLOCG00000005440) #28	SYDE2 (ENSLOCG00000005452) #29	DNAI3 (ENSLOCG00000005471) #30	MCOLN3 (ENSLOCG00000005502) #31	mcoln2 (ENSLOCG00000005533) #32	LPAR3 (ENSLOCG00000005571) #33	ENSLOCG00000005586	ssx2ipa (ENSLOCG00000005611) #34	ENSLOCG00000005628	ENSLOCG00000005652
Reedfish	MODERN SPECIES	1	st3gal3b (ENSECRG00000009602)	KDM4A (ENSECRG00000009628)	ptprfb (ENSECRG00000009733)	ENSECRG00000009894	hyi (ENSECRG00000009902)	SZT2 (ENSECRG00000009935)	ENSECRG00000009972	med8 (ENSECRG00000009978)	pbx1a (ENSECRG00000010004)	glula (ENSECRG00000010055)	ENSECRG00000010086	gadd45aa (ENSECRG00000010124)	gng12a (ENSECRG00000010138)	ENSECRG00000010149	wls (ENSECRG00000010158)	ODF2L (ENSECRG00000010176) #22	ENSECRG00000010218 #23	ENSECRG00000010301 #23	ENSECRG00000010312 #24	ccn1 (ENSECRG00000010325) #25	DDAH1 (ENSECRG00000010335) #26	ENSECRG00000010341	zgc:65873 (ENSECRG00000010346) #28	SYDE2 (ENSECRG00000010356) #29	DNAI3 (ENSECRG00000010367) #30	MCOLN3 (ENSECRG00000010401) #31	mcoln2 (ENSECRG00000010417) #32	ssx2ipa (ENSECRG00000010431) #34	ENSECRG00000010454	ENSECRG00000010519	ENSECRG00000010620
Elephant shark	MODERN SPECIES	1492	barhl2 (ENSCMIG00000007936)	ENSCMIG00000007942	ENSCMIG00000007946	lrrc8db (ENSCMIG00000007947)	LRRC8C (ENSCMIG00000007949)	LRRC8B (ENSCMIG00000007953)	kyat3.2 (ENSCMIG00000007963) #10	gtf2b (ENSCMIG00000007987) #11	pkn2b (ENSCMIG00000008067) #12	lmo4b (ENSCMIG00000008140) #13	hs2st1a (ENSCMIG00000008142) #14	ENSCMIG00000008146 ##15	ENSCMIG00000008148	sh3glb1a (ENSCMIG00000008163) #16	CLCA1 (ENSCMIG00000008194) #20	ENSCMIG00000008248 #22	ENSCMIG00000008253	ENSCMIG00000008256 #23	ENSCMIG00000008260 #23	ENSCMIG00000008263 #23	ENSCMIG00000008265 #24	ENSCMIG00000008267	ccn1 (ENSCMIG00000008269) #25	DDAH1 (ENSCMIG00000008274) #26	zgc:65873 (ENSCMIG00000008275) #28	SYDE2 (ENSCMIG00000008277) #29	DNAI3 (ENSCMIG00000008279) #30	MCOLN3 (ENSCMIG00000008299) #31	mcoln2 (ENSCMIG00000008343) #32	lpar3 (ENSCMIG00000008360) #33	ENSCMIG00000008366
Gnathostomata	ANCESTRAL SPECIES	510														ENSGT00440000039084	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877
Elephant shark	MODERN SPECIES	1562	plpp7a (ENSCMIG00000016331)	fam78aa (ENSCMIG00000016330)	ENSCMIG00000016315	aif1l (ENSCMIG00000016299)	ENSCMIG00000016297	ENSCMIG00000016294	ENSCMIG00000016293	ENSCMIG00000016290	ENSCMIG00000016286	fibcd1b (ENSCMIG00000016256)	ABL1 (ENSCMIG00000016173)	exosc2 (ENSCMIG00000016141)	ENSCMIG00000016135	ptges2 (ENSCMIG00000016130)	bbln (ENSCMIG00000016129)	ODF2 (ENSCMIG00000016109) ##22	GLE1 (ENSCMIG00000016097)	sptan1 (ENSCMIG00000015771)	dync2i2 (ENSCMIG00000015639)	setb (ENSCMIG00000015636)	ENSCMIG00000015634	coq4 (ENSCMIG00000015632)	TRUB2 (ENSCMIG00000015631)	ENSCMIG00000015627	phpt1 (ENSCMIG00000015624)	rnf224 (ENSCMIG00000015622)	ENSCMIG00000015616	zgc:92275 (ENSCMIG00000015611)	grin1a (ENSCMIG00000015401)	TMEM141 (ENSCMIG00000015331)	TRAF2 (ENSCMIG00000015330)
Euteleostomi	ANCESTRAL SPECIES	123											ENSGT00530000062932	ENSGT00940000155214	ENSGT00390000001761	ENSGT00440000039084	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742	ENSGT00940000156235	ENSGT00390000012207	ENSGT00940000163383	ENSGT00940000155841
Actinopterygii	ANCESTRAL SPECIES	99															ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000164790	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000177481	ENSGT00940000153181	ENSGT00940000156231	ENSGT00390000004458	ENSGT00940000160010	ENSGT00390000014148	ENSGT00390000007746
Neopterygii	ANCESTRAL SPECIES	129															ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000177481	ENSGT00940000153181	ENSGT00940000156231	ENSGT00390000004458	ENSGT00940000160010	ENSGT00390000014148	ENSGT00390000007746	ENSGT00940000164784	ENSGT00390000011873.e.a	ENSGT00940000179483
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	23	ENSGT00610000086153	ENSGT00940000154890.b	ENSGT01020000230351.D.a.a.a	ENSGT00940000163205.d	ENSGT00940000166931	ENSGT00940000161345	ENSGT00940000156340.a.d	ENSGT00940000156340.a.c	ENSGT00530000063156.a.a.b	ENSGT00440000038585.d	ENSGT00440000038585.c	ENSGT00940000153181	ENSGT00940000177481	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d	ENSGT00940000153877.b	ENSGT00940000158483	ENSGT00390000000224	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00940000177919	ENSGT00940000156902.a	ENSGT00940000157207.a.b	ENSGT00450000040324.b	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841	ENSGT01060000248544.b
Clupeocephala	ANCESTRAL SPECIES	51	ENSGT00940000163205.d	ENSGT00940000166931	ENSGT00940000161345	ENSGT00940000156340.a.d	ENSGT01020000230351.D.a.a.b	ENSGT01100000263581	ENSGT00940000163205.c	ENSGT00940000156340.a.c	ENSGT00530000063156.a.a.b	ENSGT00440000038585.d	ENSGT00440000038585.c	ENSGT00940000153181	ENSGT00940000177481	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d	ENSGT00940000153877.a.a.b	ENSGT00940000158483	ENSGT00940000153877.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a
Otomorpha	ANCESTRAL SPECIES	194																ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00940000158501.d.a	ENSGT00390000016384.l.a
Clupeiformes	ANCESTRAL SPECIES	105																ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00940000158501.d.a	ENSGT00390000016384.l.a
Denticle herring	MODERN SPECIES	13	fgf10a (ENSDCDG00000002579)	nnt (ENSDCDG00000002607)	ENSDCDG00000002825	ENSDCDG00000002829	ENSDCDG00000002846	ENSDCDG00000003354	ENSDCDG00000003374	cfap53 (ENSDCDG00000003392)	myo5b (ENSDCDG00000003609)	il7r (ENSDCDG00000005512)	capslb (ENSDCDG00000005513)	lmbrd2b (ENSDCDG00000005515)	RALGDS (ENSDCDG00000005584)	TBC1D13 (ENSDCDG00000005615)	zer1 (ENSDCDG00000006711)	ODF2 (ENSDCDG00000006952) ##22	sptan1 (ENSDCDG00000007640)	dync2i2 (ENSDCDG00000016959)	setb (ENSDCDG00000016962)	ENSDCDG00000017019	zdhhc12b (ENSDCDG00000022220)	uap1l1 (ENSDCDG00000022226)	CUX2 (ENSDCDG00000022242)	ENSDCDG00000022319	CIT (ENSDCDG00000022831)	rplp0 (ENSDCDG00000024100)	ENSDCDG00000024107	CRYBB2 (ENSDCDG00000024109)	crybb3 (ENSDCDG00000024110)	MSI1 (ENSDCDG00000024113)	TMEM233 (ENSDCDG00000024157)
Atlantic herring	MODERN SPECIES	3	fgf10a (ENSCHAG00000026910)	nnt (ENSCHAG00000026492)	ENSCHAG00000026451	ENSCHAG00000026449	ENSCHAG00000026445	ENSCHAG00000026229	ENSCHAG00000026200	cfap53 (ENSCHAG00000026197)	myo5b (ENSCHAG00000024021)	il7r (ENSCHAG00000023878)	capslb (ENSCHAG00000023871)	lmbrd2b (ENSCHAG00000023656)	RALGDS (ENSCHAG00000023569)	zer1 (ENSCHAG00000023524)	PTGES2 (ENSCHAG00000023511)	ODF2 (ENSCHAG00000023478) ##22	TBC1D13 (ENSCHAG00000023380)	zer1 (ENSCHAG00000023015)	PTGES2 (ENSCHAG00000022991)	sptan1 (ENSCHAG00000019407)	dync2i2 (ENSCHAG00000019172)	setb (ENSCHAG00000019128)	ENSCHAG00000013440	zdhhc12b (ENSCHAG00000013283)	uap1l1 (ENSCHAG00000013164)	slc25a25b (ENSCHAG00000011571)	eeig1b (ENSCHAG00000011493)	dpm2 (ENSCHAG00000011469)	dpm2 (ENSCHAG00000011439)	PIP5KL1 (ENSCHAG00000011429)	sh3glb2b (ENSCHAG00000010417)
Otophysi	ANCESTRAL SPECIES	196																ENSGT00530000063497.a.a ##22	ENSGT00940000181939	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000153592.B.b.a.b	ENSGT01030000234555.a.a.a.c.b.a	ENSGT00990000213389	ENSGT00940000154890.b	ENSGT00940000164721.b	ENSGT00390000000459.d	ENSGT00940000156763.b.a	ENSGT00940000161243	ENSGT00940000167205	ENSGT00940000165709	ENSGT00440000038604.i
Characiphysae	ANCESTRAL SPECIES	23	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000161685.A.a.d	ENSGT00940000156208.i.e	ENSGT00950000182926.b.c	ENSGT00940000164254.a.b	ENSGT00820000127055.b	ENSGT00730000111140	ENSGT00940000167368	ENSGT00390000006044	ENSGT00390000003581	ENSGT00940000154702.a.b	ENSGT00940000166762	ENSGT00950000183203.c.a	ENSGT00530000063497.a.a ##22	ENSGT00940000181939	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000153592.B.b.a.b	ENSGT01030000234555.a.a.a.c.b.a	ENSGT00610000086153	ENSGT00940000154890.b	ENSGT00940000164721.b	ENSGT00390000000459.d	ENSGT00940000156763.b.a	ENSGT00940000161243	ENSGT00940000167205	ENSGT00940000165709	ENSGT00440000038604.j.c
Characiphysae_b	ANCESTRAL SPECIES	21	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000161685.A.a.d	ENSGT00940000156208.i.e	ENSGT00950000182926.b.c	ENSGT00940000164254.a.b	ENSGT00820000127055.b	ENSGT00730000111140	ENSGT00940000167368	ENSGT00390000006044	ENSGT00390000003581	ENSGT00940000154702.a.b	ENSGT00940000166762	ENSGT00950000183203.c.a	ENSGT00530000063497.a.a ##22	ENSGT00940000181939	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000153592.B.b.a.b	ENSGT01030000234555.a.a.a.c.b.a	ENSGT00610000086153	ENSGT00940000154890.b	ENSGT00940000164721.b	ENSGT00390000000459.d	ENSGT00940000156763.b.a	ENSGT00940000161243	ENSGT00940000167205	ENSGT00940000165709	ENSGT00440000038604.i
Characoidei	ANCESTRAL SPECIES	31	ENSGT01030000234574.B.c.b.a.a.a	ENSGT00940000160897	ENSGT00950000183010.a.a.b	ENSGT00940000161685.A.a.d	ENSGT00940000156208.i.e	ENSGT00950000182926.b.c	ENSGT00940000164254.a.b	ENSGT00820000127055.b	ENSGT00730000111140	ENSGT00940000167368	ENSGT00390000006044	ENSGT00390000003581	ENSGT00940000154702.a.b	ENSGT00940000166762	ENSGT00950000183203.c.a	ENSGT00530000063497.a.a ##22	ENSGT00940000181939	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000153592.B.b.a.b	ENSGT01030000234555.a.a.a.c.b.a	ENSGT00610000086153	ENSGT00940000154890.b	ENSGT00940000164721.b	ENSGT00390000000459.d	ENSGT00940000156763.b.a	ENSGT00940000161243	ENSGT00940000167205	ENSGT00940000165709	ENSGT00440000038604.i
Red-bellied piranha	MODERN SPECIES	7	gpat3 (ENSPNAG00000009267)	nkx6.1 (ENSPNAG00000009232)	rpl17 (ENSPNAG00000009219)	nefma (ENSPNAG00000009165)	NEFL (ENSPNAG00000009120)	pgam2 (ENSPNAG00000009116)	ENSPNAG00000009104	crkl (ENSPNAG00000001291)	med15 (ENSPNAG00000001282)	si:ch211-222n4.2 (ENSPNAG00000009045)	smpd4 (ENSPNAG00000009011)	exd1 (ENSPNAG00000008931)	TMEM132C (ENSPNAG00000001248)	ENSPNAG00000008911	RIMBP2 (ENSPNAG00000008889)	ODF2 (ENSPNAG00000008848) ##22	si:dkey-228b2.6 (ENSPNAG00000008828)	sptan1 (ENSPNAG00000008819)	dync2i2 (ENSPNAG00000001185)	setb (ENSPNAG00000008749)	SPECC1L (ENSPNAG00000008727)	ADORA2A (ENSPNAG00000008697)	snrpd3l (ENSPNAG00000008683)	ENSPNAG00000008662	zgc:113162 (ENSPNAG00000008609)	NSMF (ENSPNAG00000001108)	PNPLA7 (ENSPNAG00000008533)	clic3 (ENSPNAG00000008464)	fut7 (ENSPNAG00000008455)	pou5f3 (ENSPNAG00000007196)	npdc1a (ENSPNAG00000004656)
Mexicana tetra	MODERN SPECIES	5	ENSAMXG00000007021	ENSAMXG00000033649	ENSAMXG00000018938	ENSAMXG00000043797	ppp1r26 (ENSAMXG00000035528)	ENSAMXG00000030887	ENSAMXG00000040429	fnip1 (ENSAMXG00000000950)	ENSAMXG00000010601	irf1b (ENSAMXG00000010595)	ENSAMXG00000036808	ENSAMXG00000037303	slc22a4 (ENSAMXG00000038161)	ENSAMXG00000010591	ENSAMXG00000010589	ODF2 (ENSAMXG00000010588) ##22	sptan1 (ENSAMXG00000010528)	dync2i2 (ENSAMXG00000010491)	setb (ENSAMXG00000039614)	SPECC1L (ENSAMXG00000010464)	ADORA2A (ENSAMXG00000033574)	snrpd3l (ENSAMXG00000038984)	ENSAMXG00000041146	zgc:113162 (ENSAMXG00000041707)	ENSAMXG00000031975	NSMF (ENSAMXG00000010428)	ENSAMXG00000010623	ENSAMXG00000042069	ENSAMXG00000033499	clic3 (ENSAMXG00000037471)	fut7 (ENSAMXG00000024955)
Electric eel	MODERN SPECIES	759													znf423 (ENSEEEG00000015463)	ENSEEEG00000015480	RIMBP2 (ENSEEEG00000015482)	ODF2 (ENSEEEG00000015485) ##22	sptan1 (ENSEEEG00000015684)	dync2i2 (ENSEEEG00000020999)	setb (ENSEEEG00000021002)	ENSEEEG00000021004	ENSEEEG00000021005
Channel catfish	MODERN SPECIES	9	oaz1b (ENSIPUG00000002907)	UHRF2 (ENSIPUG00000002926)	zgc:113162 (ENSIPUG00000002972)	setb (ENSIPUG00000002990)	specc1l (ENSIPUG00000003022)	ADORA2A (ENSIPUG00000003063)	snrpd3 (ENSIPUG00000003083)	ENSIPUG00000003113	wdr34 (ENSIPUG00000003139)	sptan1 (ENSIPUG00000003170)	smpd4 (ENSIPUG00000003269)	ENSIPUG00000003370	TMEM132C (ENSIPUG00000003376)	ENSIPUG00000003418	RIMBP2 (ENSIPUG00000003435)	odf2 (ENSIPUG00000003472) ##22	cp080 (ENSIPUG00000003491)	med15 (ENSIPUG00000003511)	crkl (ENSIPUG00000003533)	ENSIPUG00000003546	pgam2 (ENSIPUG00000003558)	neflb (ENSIPUG00000003563)	nefm (ENSIPUG00000003572)	rpl17 (ENSIPUG00000003599)	nkx6.1 (ENSIPUG00000003661)	agpat9 (ENSIPUG00000003715)	fam175a (ENSIPUG00000003772)	mrps18c (ENSIPUG00000003783)	helq (ENSIPUG00000003800)	hpse (ENSIPUG00000003847)	myl5 (ENSIPUG00000003872)
Cyprinoidei	ANCESTRAL SPECIES	36	ENSGT00940000166324	ENSGT00390000008092.a	ENSGT00940000158028	ENSGT00390000003453.a.d	ENSGT00940000153534.B	ENSGT01060000253477	ENSGT00940000163763	ENSGT00940000159054	ENSGT00390000018344	ENSGT00940000166573	ENSGT00940000154201.a.a.a.a	ENSGT00940000158673	ENSGT00940000161008.f	ENSGT00500000044945.b	ENSGT00390000000860.b.b	ENSGT00530000063497.a.a ##22	ENSGT00940000181939	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000153592.B.b.a.b	ENSGT01030000234555.a.a.a.c.b.a	ENSGT00940000154890.b	ENSGT00940000164721.b	ENSGT00390000000459.d	ENSGT00940000156763.b.a	ENSGT00940000161243	ENSGT00940000167205	ENSGT00940000165709	ENSGT00440000038604.i	ENSGT00940000165673
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	138	ENSGT00390000018225.B.a.a	ENSGT00390000002416	ENSGT00940000166324.e.a	ENSGT00940000166324.e.b	ENSGT00390000008092.a.a	ENSGT00940000158028.h	ENSGT00390000003453.a.d.b	ENSGT00940000153534.B.p	ENSGT00940000163763.c	ENSGT00390000018344.b	ENSGT00940000166573.a	ENSGT00940000154201.a.a.a.a	ENSGT00940000158673.g.b	ENSGT00940000161008.f.b	ENSGT00390000000860.b.b.c.b	ENSGT00530000063497.a.a.a ##22	ENSGT00940000156662.d.i.a.b
Cyprininae_a	ANCESTRAL SPECIES	81	ENSGT00940000165790.a	ENSGT00390000018225.B.a.b	ENSGT00390000002416.k	ENSGT00940000166324.e.b	ENSGT00390000008092.a.a	ENSGT00940000158028.h	ENSGT00390000003453.a.d.b	ENSGT00940000153534.B.p	ENSGT00940000163763.c	ENSGT00390000018344.b	ENSGT00940000166573.a	ENSGT00940000154201.a.a.a.a	ENSGT00940000158673.g.b	ENSGT00940000161008.f.b	ENSGT00390000000860.b.b.c.b	ENSGT00530000063497.a.a.a ##22	ENSGT00940000156662.d.i.a.b	ENSGT00940000153877.a.a.b.a	ENSGT00940000153592.B.b.a.b.d	ENSGT01030000234555.a.a.a.c.b.a.d	ENSGT00940000154890.b.c	ENSGT00940000164721.b.b	ENSGT00390000000459.d.a	ENSGT00940000156763.b.a.a	ENSGT00940000161243.e	ENSGT00940000167205.o	ENSGT00940000165709.b	ENSGT00440000038604.i.h	ENSGT00940000165673.a	ENSGT00940000159996.l	ENSGT00940000154149.a.a.b
Golden-line barbel	MODERN SPECIES	60	rfesd (ENSSGRG00000047671)	nudt2 (ENSSGRG00000047670)	ube2r2 (ENSSGRG00000047637)	dcaf12 (ENSSGRG00000047634)	ubap2a (ENSSGRG00000047543)	nop56 (ENSSGRG00000047519)	ENSSGRG00000047513	zgc:64106 (ENSSGRG00000047511)	zgc:162344 (ENSSGRG00000047509)	ENSSGRG00000047508	ENSSGRG00000047507	celf4 (ENSSGRG00000047506)	ENSSGRG00000047504	MYORG (ENSSGRG00000047501)	fam219aa (ENSSGRG00000047500)	ODF2 (ENSSGRG00000047499) ##22	sptan1 (ENSSGRG00000041340)	dync2i2 (ENSSGRG00000041100)	setb (ENSSGRG00000040972)	SPECC1L (ENSSGRG00000040912)	ADORA2A (ENSSGRG00000040910)	ENSSGRG00000040909	zgc:113162 (ENSSGRG00000040906)	NSMF (ENSSGRG00000040905)	ENSSGRG00000038764	clic3 (ENSSGRG00000038719)	fut7 (ENSSGRG00000038718)	pou5f3 (ENSSGRG00000038716)	npdc1a (ENSSGRG00000038714)	ENSSGRG00000038535	slc31a2 (ENSSGRG00000038518)
Common carp reference	MODERN SPECIES	38	rfesd (ENSCCRG00000003647)	nudt2 (ENSCCRG00000055472)	ube2r2 (ENSCCRG00000003351)	ubap1 (ENSCCRG00000003304)	dcaf12 (ENSCCRG00000011905)	ubap2a (ENSCCRG00000003198)	nop56 (ENSCCRG00000011942)	zgc:64106 (ENSCCRG00000061438)	aqp7 (ENSCCRG00000059261)	tpgs2 (ENSCCRG00000033134)	zgc:162344 (ENSCCRG00000012010)	celf4 (ENSCCRG00000060309)	ENSCCRG00000054183	ENSCCRG00000071002	fam219aa (ENSCCRG00000073486)	ODF2 (ENSCCRG00000082203) ##22	sptan1 (ENSCCRG00000075772)	dync2i2 (ENSCCRG00000053686)	setb (ENSCCRG00000078889)	ENSCCRG00000019949	ENSCCRG00000064000	snrpd3l (ENSCCRG00000069381)	ENSCCRG00000076581	ENSCCRG00000066648	ENSCCRG00000060339	ENSCCRG00000020482	fut7 (ENSCCRG00000073981)	pou5f3 (ENSCCRG00000059812)	npdc1a (ENSCCRG00000054357)	ENSCCRG00000010173	niban2a (ENSCCRG00000014909)
Cyprininae	ANCESTRAL SPECIES	85			ENSGT00390000008092.a.b	ENSGT00940000158028.g	ENSGT00390000003453.a.d.a	ENSGT00940000153534.B.o	ENSGT01060000253477	ENSGT00940000163763.d	ENSGT00940000159054	ENSGT00390000018344.a	ENSGT00940000166573.b	ENSGT00940000158673.g.a	ENSGT00940000161008.f.a	ENSGT00500000044945.b	ENSGT00390000000860.b.b.c.a	ENSGT00530000063497.a.a.b ##22	ENSGT00940000181939	ENSGT00940000156662.d.i.b	ENSGT00940000158483	ENSGT00940000153877.a.a.b.a	ENSGT00940000153592.B.b.a.b.d	ENSGT01030000234555.a.a.a.c.b.a.d	ENSGT00940000153877.a.a.b.b	ENSGT00940000153592.B.b.a.b.c	ENSGT01030000234555.a.a.a.c.b.a.c	ENSGT00940000164721.b.a	ENSGT00390000000459.d.b.a	ENSGT00940000156763.b.a.b	ENSGT00940000161243.f	ENSGT00940000167205.p	ENSGT00940000165709.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	13	pcsk1 (ENSCARG00000007231)	cast (ENSCARG00000007073)	cd8a (ENSCARG00000006989)	ENSCARG00000006946	zmat1 (ENSCARG00000006938)	ENTPD2 (ENSCARG00000006838)	grin1a (ENSCARG00000004183)	GADD45G (ENSCARG00000046246)	gadd45gb.1 (ENSCARG00000046221)	ENSCARG00000046206	ENSCARG00000046191	ghrb (ENSCARG00000045569)	MYORG (ENSCARG00000045525)	zgc:109965 (ENSCARG00000045506)	fam219aa (ENSCARG00000045401)	ODF2 (ENSCARG00000045345) ##22	sptan1 (ENSCARG00000040782)	setb (ENSCARG00000040334)	SPECC1L (ENSCARG00000040138)	ADORA2A (ENSCARG00000040101)	snrpd3l (ENSCARG00000040079)	ENSCARG00000040071	ENSCARG00000039894	zgc:113162 (ENSCARG00000039876)	NSMF (ENSCARG00000039727)	ENSCARG00000032148	clic3 (ENSCARG00000031884)	fut7 (ENSCARG00000031879)	pou5f3 (ENSCARG00000031865)	npdc1a (ENSCARG00000031858)	ENSCARG00000031804
Goldfish	MODERN SPECIES	3257															fam219aa (ENSCARG00000067639)	ODF2 (ENSCARG00000067625) ##22
Cyprininae_a	ANCESTRAL SPECIES	44	ENSGT00390000002416.l	ENSGT00940000166324.e.a	ENSGT00390000008092.a.b	ENSGT00940000158028.g	ENSGT00390000003453.a.d.a	ENSGT00940000153534.B.o	ENSGT01060000253477	ENSGT00940000163763.d	ENSGT00940000159054	ENSGT00390000018344.a	ENSGT00940000166573.b	ENSGT00940000158673.g.a	ENSGT00940000161008.f.a	ENSGT00500000044945.b	ENSGT00390000000860.b.b.c.a	ENSGT00530000063497.a.a.b ##22	ENSGT00940000181939	ENSGT00940000156662.d.i.b	ENSGT00940000158483	ENSGT00940000153877.a.a.b.b	ENSGT00940000153592.B.b.a.b.c	ENSGT01030000234555.a.a.a.c.b.a.c	ENSGT00940000154890.b.d	ENSGT00940000164721.b.a	ENSGT00390000000459.d.b.a	ENSGT00940000156763.b.a.b	ENSGT00940000161243.f	ENSGT00940000167205.p	ENSGT00940000165709.a	ENSGT00440000038604.i.g	ENSGT00940000165673.b
Common carp reference	MODERN SPECIES	45	rfesd (ENSCCRG00000011881)	nudt2 (ENSCCRG00000011884)	ubap1 (ENSCCRG00000011894)	dcaf12 (ENSCCRG00000003285)	ubap2a (ENSCCRG00000011916)	nop56 (ENSCCRG00000003169)	mlnl (ENSCCRG00000076419)	zgc:64106 (ENSCCRG00000003153)	zgc:162344 (ENSCCRG00000055698)	tpgs2 (ENSCCRG00000012000)	celf4 (ENSCCRG00000056320)	ENSCCRG00000080485	ENSCCRG00000080714	zgc:109965 (ENSCCRG00000013928)	fam219aa (ENSCCRG00000080240)	ODF2 (ENSCCRG00000042857) ##22	si:dkey-228b2.6 (ENSCCRG00000042846)	sptan1 (ENSCCRG00000082138)	dync2i2 (ENSCCRG00000009470)	setb (ENSCCRG00000019974)	ENSCCRG00000007211	ENSCCRG00000007178	ENSCCRG00000007176	ENSCCRG00000007159	zgc:113162 (ENSCCRG00000007151)	ENSCCRG00000020333	ENSCCRG00000003333	clic3 (ENSCCRG00000010120)	fut7 (ENSCCRG00000056233)	pou5f3 (ENSCCRG00000079329)	npdc1a (ENSCCRG00000010104)
Golden-line barbel	MODERN SPECIES	293	ENSSGRG00000017615	rfesd (ENSSGRG00000017612)	nudt2 (ENSSGRG00000017610)	ube2r2 (ENSSGRG00000017532)	ubap1 (ENSSGRG00000017530)	dcaf12 (ENSSGRG00000017529)	ubap2a (ENSSGRG00000017527)	nop56 (ENSSGRG00000017525)	zgc:64106 (ENSSGRG00000017524)	aqp7 (ENSSGRG00000017523)	tpgs2 (ENSSGRG00000017522)	zgc:162344 (ENSSGRG00000017521)	celf4 (ENSSGRG00000017520)	MYORG (ENSSGRG00000017518)	fam219aa (ENSSGRG00000017515)	ENSSGRG00000017498 ##22	sptan1 (ENSSGRG00000011490)	ENSSGRG00000011392	ENSSGRG00000011390	setb (ENSSGRG00000011264)	SPECC1L (ENSSGRG00000011195)	ADORA2A (ENSSGRG00000011191)	snrpd3l (ENSSGRG00000011141)	ENSSGRG00000011063	zgc:113162 (ENSSGRG00000011055)
Zebrafish	MODERN SPECIES	13	ube2r2 (ENSDARG00000058740)	ubap1 (ENSDARG00000058746)	dcaf12 (ENSDARG00000063155)	ubap2a (ENSDARG00000088318)	nop56 (ENSDARG00000012820)	mlnl (ENSDARG00000092916)	zgc:64106 (ENSDARG00000011371)	aqp7 (ENSDARG00000026787)	tpgs2 (ENSDARG00000011926)	zgc:162344 (ENSDARG00000070040)	celf4 (ENSDARG00000070045)	ENSDARG00000113932	MYORG (ENSDARG00000074894)	zgc:109965 (ENSDARG00000012126)	fam219aa (ENSDARG00000016396)	ODF2 (ENSDARG00000028900) ##22	si:dkey-228b2.6 (ENSDARG00000099284)	sptan1 (ENSDARG00000019231)	dync2i2 (ENSDARG00000057635)	setb (ENSDARG00000003920)	SPECC1L (ENSDARG00000042232)	adora2ab (ENSDARG00000058488)	snrpd3l (ENSDARG00000076283)	ENSDARG00000078645	zgc:113162 (ENSDARG00000052923)	NSMF (ENSDARG00000060025)	ENSDARG00000093863	pnpla7a (ENSDARG00000062986)	clic3 (ENSDARG00000044776)	fut7 (ENSDARG00000044775)	pou5f3 (ENSDARG00000044774)
Euteleosteomorpha	ANCESTRAL SPECIES	15	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT01020000230351.D.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00940000161345	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00390000005742.x	ENSGT00390000004067	ENSGT00390000006287	ENSGT00940000154043.A.j.b
Protacanthopterygii	ANCESTRAL SPECIES	17	ENSGT00940000153877.a.a.a	ENSGT00390000012903	ENSGT00390000000224	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00440000038585.c.c	ENSGT00940000156340.a.d	ENSGT00940000161345	ENSGT00940000166931	ENSGT00940000178900	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000153464.A.a	ENSGT00940000156902.b	ENSGT00940000164790.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00940000165164.f	ENSGT00950000183190.a.b.b	ENSGT00390000005742.x
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	78	ENSGT00390000004067	ENSGT00390000005742.x	ENSGT00950000183190.a.b.b.d	ENSGT00940000165164.f	ENSGT00940000155841.c.b	ENSGT00940000158633.a.c	ENSGT00390000001098.i	ENSGT00730000111912.C.c	ENSGT00940000156811.b.c.b	ENSGT00940000156811.b.d	ENSGT00450000040324.b.k	ENSGT00940000157207.a.a.g	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000166931.e	ENSGT00530000063497.a.a.c ##22	ENSGT00940000156662.d.h.b	ENSGT00940000153877.a.a.b.c
Salmoninae_a	ANCESTRAL SPECIES	80	ENSGT00390000008565.a.p	ENSGT00390000013112.d	ENSGT00940000153601.a.a.e.b.a.e.a	ENSGT00940000156235.c.a.c	ENSGT01020000230412.A.c.a.c	ENSGT00940000154043.A.j.b.f	ENSGT00950000183190.a.b.b.c.b	ENSGT00940000158633.a.d	ENSGT00390000001098.j	ENSGT00940000156811.b.c.a	ENSGT00450000040324.b.l	ENSGT00940000157207.a.a.h	ENSGT00940000159428.f.b	ENSGT00940000156902.b	ENSGT00940000166931.e	ENSGT00530000063497.a.a.c ##22	ENSGT00940000156662.d.h.b	ENSGT00940000153877.a.a.b.c	ENSGT00940000161345.d	ENSGT00940000156340.a.d.d	ENSGT00440000038585.c.d	ENSGT00940000153181.m.b	ENSGT00940000158674.g	ENSGT00530000063187.A.g	ENSGT00940000163205.d	ENSGT00550000074961.b.c	ENSGT00390000009566.h	ENSGT00940000158501.d.a.d	ENSGT00940000164907.b.b.d.b	ENSGT00900000141021.b.a.d.f	ENSGT00390000011500.l
Salmo	ANCESTRAL SPECIES	1	ENSGT00390000008565.a.p	ENSGT00390000013112.d	ENSGT00940000153601.a.a.e.b.a.e.a	ENSGT00940000156235.c.a.c	ENSGT01020000230412.A.c.a.c	ENSGT00940000154043.A.j.b.f	ENSGT00390000005742.x.b	ENSGT00950000183190.a.b.b.c.b	ENSGT00940000158633.a.d	ENSGT00390000001098.j	ENSGT00940000156811.b.c.a	ENSGT00450000040324.b.l	ENSGT00940000159428.f.b	ENSGT00940000156902.b	ENSGT00940000166931.e	ENSGT00530000063497.a.a.c ##22	ENSGT00940000156662.d.h.b	ENSGT00940000153877.a.a.b.c	ENSGT00940000161345.d	ENSGT00940000156340.a.d.d	ENSGT00440000038585.c.d	ENSGT00940000153181.m.b	ENSGT00940000158674.g	ENSGT00530000063187.A.g	ENSGT00940000163205.d	ENSGT00550000074961.b.c	ENSGT00390000009566.h	ENSGT00940000158501.d.a.d	ENSGT00940000164907.b.b.d.b	ENSGT00900000141021.b.a.d.f	ENSGT00940000156261.db.b
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000070956	ENSSSAG00000090175	ENSSSAG00000104107	miga2 (ENSSSAG00000070899)	dolpp1 (ENSSSAG00000063525)	ENSSSAG00000070855	rapgef1b (ENSSSAG00000070639)	uck1 (ENSSSAG00000111451)	lrrc8aa (ENSSSAG00000069635)	ENSSSAG00000092176	ENSSSAG00000069630	ENSSSAG00000069616	eeig1b (ENSSSAG00000069579)	slc25a25b (ENSSSAG00000048730)	ENSSSAG00000067604	ENSSSAG00000067576 ##22	ENSSSAG00000042832	ENSSSAG00000088806	set (ENSSSAG00000068418)	ENSSSAG00000042444	ENSSSAG00000042291	ENSSSAG00000041813	ENSSSAG00000120691	ENSSSAG00000041629	ENSSSAG00000040195	ENSSSAG00000106260	ENSSSAG00000040133	ENSSSAG00000083596	ppp6c (ENSSSAG00000040088)	SCAI (ENSSSAG00000119979)	ARP5L (ENSSSAG00000039245)
River trout	MODERN SPECIES	3	ST6GALNAC6 (ENSSTUG00000043508)	dolpp1 (ENSSTUG00000043547)	NTNG2 (ENSSTUG00000043593)	ENSSTUG00000043604	rapgef1b (ENSSTUG00000043677)	uck1 (ENSSTUG00000045163)	lrrc8aa (ENSSTUG00000045205)	ENSSTUG00000045219	PIP5KL1 (ENSSTUG00000045238)	dpm2 (ENSSTUG00000045250)	eeig1b (ENSSTUG00000045254)	naif1 (ENSSTUG00000045347)	ENSSTUG00000045381	zdhhc12b (ENSSTUG00000045963)	ddt (ENSSTUG00000045971)	ODF2 (ENSSTUG00000045992) ##22	ENSSTUG00000046017	sptan1 (ENSSTUG00000046139)	setb (ENSSTUG00000047566)	chchd10 (ENSSTUG00000047578)	ENSSTUG00000047580	smarcb1b (ENSSTUG00000047596)	RALGDS (ENSSTUG00000047655)	TBC1D13 (ENSSTUG00000047709)	zer1 (ENSSTUG00000047898)	gstt1b (ENSSTUG00000048182)	ppp6c (ENSSTUG00000048189)	SCAI (ENSSTUG00000048191)	arpc5lb (ENSSTUG00000048199)	lmo4a (ENSSTUG00000048205)	ier5l (ENSSTUG00000048211)
Oncorhynchus	ANCESTRAL SPECIES	85	ENSGT00940000153294.e	ENSGT00940000160114.g	ENSGT00390000013112.d	ENSGT00940000153601.a.a.e.b.a.e.a	ENSGT00940000156235.c.a.c	ENSGT01020000230412.A.c.a.c	ENSGT00940000154043.A.j.b.f	ENSGT00950000183190.a.b.b.c.b	ENSGT00940000158633.a.d	ENSGT00390000001098.j	ENSGT00940000156811.b.c.a	ENSGT00450000040324.b.l	ENSGT00940000157207.a.a.h	ENSGT00940000156902.b	ENSGT00940000166931.e.a	ENSGT00530000063497.a.a.c ##22	ENSGT00940000156662.d.h.b	ENSGT00940000153877.a.a.b.c	ENSGT00940000156340.a.d.d	ENSGT00440000038585.c.d	ENSGT00940000153181.m.b	ENSGT00940000158674.g	ENSGT00530000063187.A.g	ENSGT00940000163205.d	ENSGT00550000074961.b.c	ENSGT00390000009566.h	ENSGT00940000158501.d.a.d	ENSGT00940000164907.b.b.d.b	ENSGT00900000141021.b.a.d.f	ENSGT00390000011500.l	ENSGT00940000155603.A.a.a.a.a
Rainbow trout	MODERN SPECIES	364	ENSOMYG00000040937	ENSOMYG00000040922	dolpp1 (ENSOMYG00000040886)	ENSOMYG00000040864	rapgef1b (ENSOMYG00000038298)	uck1 (ENSOMYG00000037846)	lrrc8aa (ENSOMYG00000037813)	ENSOMYG00000037775	PIP5KL1 (ENSOMYG00000000213)	DPM2 (ENSOMYG00000068796)	eeig1b (ENSOMYG00000030131)	NAIF1 (ENSOMYG00000030117)	slc25a25b (ENSOMYG00000029907)	ENSOMYG00000073922	ENSOMYG00000052811	ENSOMYG00000029607 ##22	ENSOMYG00000026738	setb (ENSOMYG00000025957)	ENSOMYG00000043272	ENSOMYG00000025913	ENSOMYG00000025861	ENSOMYG00000025720
Oncorhynchus_a	ANCESTRAL SPECIES	47	ENSGT00390000004339.r	ENSGT00940000153294.e	ENSGT00940000160114.g	ENSGT00390000013112.d	ENSGT00940000153601.a.a.e.b.a.e.a	ENSGT00940000156235.c.a.c	ENSGT01020000230412.A.c.a.c	ENSGT00940000154043.A.j.b.f	ENSGT00950000183190.a.b.b.c.b	ENSGT00940000158633.a.d	ENSGT00390000001098.j	ENSGT00940000156811.b.c.a	ENSGT00940000159428.f.b	ENSGT00940000156902.b	ENSGT00940000166931.e.a	ENSGT00530000063497.a.a.c ##22	ENSGT00940000156662.d.h.b	ENSGT00940000153877.a.a.b.c	ENSGT00940000156340.a.d.d	ENSGT00940000158674.g.a	ENSGT00940000153181.m.b	ENSGT00940000158674.g.b	ENSGT00530000063187.A.g	ENSGT00940000163205.d	ENSGT00550000074961.b.c	ENSGT00390000009566.h	ENSGT00940000158501.d.a.d	ENSGT00940000164907.b.b.d.b	ENSGT00900000141021.b.a.d.f	ENSGT00390000011500.l	ENSGT00940000156261.eb
Chinook salmon	MODERN SPECIES	26	RPL7A (ENSOTSG00005028024)	ST6GALNAC6 (ENSOTSG00005028018)	dolpp1 (ENSOTSG00005028004)	NTNG2 (ENSOTSG00005027999)	rapgef1b (ENSOTSG00005025896)	uck1 (ENSOTSG00005025879)	lrrc8aa (ENSOTSG00005025878)	ENSOTSG00005025876	PIP5KL1 (ENSOTSG00005025873)	dpm2 (ENSOTSG00005025871)	eeig1b (ENSOTSG00005025616)	ENSOTSG00005025554	ENSOTSG00005023838	zdhhc12b (ENSOTSG00005023832)	ddt (ENSOTSG00005023830)	ODF2 (ENSOTSG00005023733) ##22	sptan1 (ENSOTSG00005021008)	setb (ENSOTSG00005020980)	ENSOTSG00005020978	dnajc10 (ENSOTSG00005016715)	frzb (ENSOTSG00005016702)	nckap1 (ENSOTSG00005013606)	dusp19a (ENSOTSG00005013594)	ENSOTSG00005013593	ENSOTSG00005013592	ENSOTSG00005013591	ENSOTSG00005013590	fbxw2 (ENSOTSG00005013586)	slc12a2 (ENSOTSG00005009234)	MAP3K1 (ENSOTSG00005009215)	ENSOTSG00005009212
Coho salmon	MODERN SPECIES	21	ST6GALNAC6 (ENSOKIG00005037820)	dolpp1 (ENSOKIG00005037762)	ENSOKIG00005037714	NTNG2 (ENSOKIG00005037657)	rapgef1b (ENSOKIG00005036604)	uck1 (ENSOKIG00005036493)	lrrc8aa (ENSOKIG00005036478)	ENSOKIG00005036460	PIP5KL1 (ENSOKIG00005036456)	dpm2 (ENSOKIG00005036406)	eeig1b (ENSOKIG00005036237)	ENSOKIG00005035986	ENSOKIG00005035959	ZDHHC12 (ENSOKIG00005035930)	ENSOKIG00005035921	ODF2 (ENSOKIG00005035802) ##22	SPTAN1 (ENSOKIG00005032298)	setb (ENSOKIG00005032028)	MMP11 (ENSOKIG00005031896)	SMARCB1 (ENSOKIG00005031522)	RALGDS (ENSOKIG00005048933)	TBC1D13 (ENSOKIG00005048837)	ZER1 (ENSOKIG00005048787)	gstt1b (ENSOKIG00005048770)	ppp6c (ENSOKIG00005048761)	SCAI (ENSOKIG00005048585)	arpc5lb (ENSOKIG00005048565)	ENSOKIG00005048564	IER5L (ENSOKIG00005048563)	ENSOKIG00005048540	ENSOKIG00005048523
Huchen	MODERN SPECIES	250	rapgef1b (ENSHHUG00000029665)	uck1 (ENSHHUG00000029696)	lrrc8aa (ENSHHUG00000029704)	ENSHHUG00000029709	ENSHHUG00000029721	ENSHHUG00000029733	PIP5KL1 (ENSHHUG00000029739)	dpm2 (ENSHHUG00000029777)	eeig1b (ENSHHUG00000029780)	naif1 (ENSHHUG00000029795)	slc25a25b (ENSHHUG00000029810)	ENSHHUG00000030486	zdhhc12b (ENSHHUG00000030495)	ddt (ENSHHUG00000030499)	ENSHHUG00000030514	ODF2 (ENSHHUG00000030526) ##22	sptan1 (ENSHHUG00000030605)	setb (ENSHHUG00000031194)
Salmoninae	ANCESTRAL SPECIES	134	ENSGT00940000160451	ENSGT00940000167171	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c	ENSGT00390000009566.g	ENSGT00550000074961.b.d	ENSGT00390000000224.j	ENSGT00530000063187.A.h	ENSGT00940000158674.h	ENSGT00940000153181.m.a	ENSGT00440000038585.c.c	ENSGT00940000156340.a.d.c	ENSGT00940000161345.c	ENSGT00940000166931.f	ENSGT00940000178900	ENSGT00530000063497.a.a.d ##22	ENSGT00940000156662.d.h.a	ENSGT00940000158483	ENSGT00940000153877.a.a.b.d	ENSGT00940000153464.A.a
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00940000167171	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c	ENSGT00390000009566.g	ENSGT00550000074961.b.d	ENSGT00390000000224.j	ENSGT00530000063187.A.h	ENSGT00940000158674.h	ENSGT00940000153181.m.a	ENSGT01000000220495	ENSGT00440000038585.c.c	ENSGT00940000156340.a.d.c	ENSGT00940000161345.c	ENSGT00940000166931.f	ENSGT00940000178900	ENSGT00530000063497.a.a.d ##22	ENSGT00940000156662.d.h.a	ENSGT00940000158483	ENSGT00940000153877.a.a.b.d	ENSGT00940000153464.A.a	ENSGT00940000164790.a	ENSGT00940000157207.a.a.g	ENSGT00450000040324.b.k	ENSGT00940000156811.b.c.b	ENSGT00730000111912.C.c	ENSGT00390000001098.i	ENSGT00940000158633.a.c	ENSGT00940000155841.c.b	ENSGT00940000165164.f	ENSGT00950000183190.a.b.b.c.a	ENSGT00950000183190.a.b.b.d
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00940000167171	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c	ENSGT00390000009566.g	ENSGT00550000074961.b.d	ENSGT00390000000224.j	ENSGT00530000063187.A.h	ENSGT00940000158674.h	ENSGT00940000153181.m.a	ENSGT00940000161345.c	ENSGT00940000156340.a.d.c	ENSGT00440000038585.c.c	ENSGT01000000220495	ENSGT00940000166931.f	ENSGT00940000178900	ENSGT00530000063497.a.a.d ##22	ENSGT00940000156662.d.h.a	ENSGT00940000158483	ENSGT00940000153877.a.a.b.d	ENSGT00940000153464.A.a	ENSGT00940000164790.a	ENSGT00940000157207.a.a.g	ENSGT00450000040324.b.k	ENSGT00940000156811.b.c.b	ENSGT00730000111912.C.c	ENSGT00390000001098.i	ENSGT00940000158633.a.c	ENSGT00940000155841.c.b	ENSGT00950000183190.a.b.b.c.a	ENSGT00390000005742.x	ENSGT00390000004067
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00940000167171	ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c	ENSGT00390000009566.g	ENSGT00550000074961.b.d	ENSGT00390000000224.j	ENSGT00530000063187.A.h	ENSGT00940000158674.h	ENSGT00940000153181.m.a	ENSGT00940000161345.c	ENSGT00940000156340.a.d.c	ENSGT00440000038585.c.c	ENSGT01000000220495	ENSGT00940000166931.f	ENSGT00940000178900	ENSGT00530000063497.a.a.d ##22	ENSGT00940000156662.d.h.a	ENSGT00940000158483	ENSGT00940000153877.a.a.b.d	ENSGT00940000153464.A.a	ENSGT00940000164790.a	ENSGT00940000157207.a.a.g	ENSGT00450000040324.b.k	ENSGT00940000156811.b.c.b	ENSGT00980000199742	ENSGT00730000111912.C.c	ENSGT00390000001098.i	ENSGT00940000158633.a.c	ENSGT00940000155841.c.b	ENSGT00950000183190.a.b.b.d	ENSGT00390000005742.x
Chinook salmon	MODERN SPECIES	12	rpl35 (ENSOTSG00005047731)	arpc5lb (ENSOTSG00005047733)	SCAI (ENSOTSG00005047741)	ppp6c (ENSOTSG00005047746)	p2rx4a (ENSOTSG00005047749)	ENSOTSG00005047750	PTGES2 (ENSOTSG00005047751)	zer1 (ENSOTSG00005047752)	TBC1D13 (ENSOTSG00005047753)	RALGDS (ENSOTSG00005009545)	chchd10 (ENSOTSG00005009548)	ENSOTSG00005009550	smarcb1b (ENSOTSG00005009552)	ddt (ENSOTSG00005009587)	ENSOTSG00005009589	ODF2 (ENSOTSG00005009590) ##22	sptan1 (ENSOTSG00005009605)	dync2i2 (ENSOTSG00005012168)	setb (ENSOTSG00005012169)	uap1l1 (ENSOTSG00005012170)	ENSOTSG00005012173	slc25a25b (ENSOTSG00005012870)	naif1 (ENSOTSG00005012878)	eeig1b (ENSOTSG00005012881)	ENSOTSG00005013126	dpm2 (ENSOTSG00005013127)	PIP5KL1 (ENSOTSG00005013128)	sh3glb2b (ENSOTSG00005013130)	srp9 (ENSOTSG00005014487)	ephx1 (ENSOTSG00005014490)	ENSOTSG00005014492
Coho salmon	MODERN SPECIES	15	RPL35 (ENSOKIG00005034926)	arpc5lb (ENSOKIG00005034885)	SCAI (ENSOKIG00005034777)	ppp6c (ENSOKIG00005034752)	ENSOKIG00005034668	PTGES2 (ENSOKIG00005034633)	zer1 (ENSOKIG00005034579)	TBC1D13 (ENSOKIG00005034529)	RALGDS (ENSOKIG00005034410)	chchd10 (ENSOKIG00005034380)	MMP11 (ENSOKIG00005034371)	smarcb1b (ENSOKIG00005034261)	ENSOKIG00005034238	ddt (ENSOKIG00005034222)	ENSOKIG00005034213	ODF2 (ENSOKIG00005034144) ##22	sptan1 (ENSOKIG00005032233)	dync2i2 (ENSOKIG00005032060)	setb (ENSOKIG00005031970)	uap1l1 (ENSOKIG00005031899)	ENSOKIG00005031476	SLC25A25 (ENSOKIG00005030466)	naif1 (ENSOKIG00005030315)	eeig1b (ENSOKIG00005030005)	ENSOKIG00005029980	ENSOKIG00005029971	dpm2 (ENSOKIG00005029944)	PIP5KL1 (ENSOKIG00005029891)	sh3glb2b (ENSOKIG00005029183)	ENSOKIG00005029120	cdk5rap2 (ENSOKIG00005029031)
Rainbow trout	MODERN SPECIES	26	ppp6c (ENSOMYG00000043082)	ENSOMYG00000043101	ENSOMYG00000043121	ENSOMYG00000043133	ENSOMYG00000043620	ENSOMYG00000050466	ENSOMYG00000043168	chchd10 (ENSOMYG00000076774)	ENSOMYG00000043280	ENSOMYG00000071467	smarcb1b (ENSOMYG00000043291)	ENSOMYG00000049969	ENSOMYG00000043299	ENSOMYG00000056974	ENSOMYG00000043338	ODF2 (ENSOMYG00000043316) ##22	sptan1 (ENSOMYG00000043696)	dync2i2 (ENSOMYG00000044330)	setb (ENSOMYG00000044338)	ENSOMYG00000044345	ENSOMYG00000044443	slc25a25b (ENSOMYG00000044841)	NAIF1 (ENSOMYG00000000050)	eeig1b (ENSOMYG00000000140)	ENSOMYG00000000180	dpm2 (ENSOMYG00000000196)	PIP5KL1 (ENSOMYG00000030188)	ENSOMYG00000069215	sh3glb2b (ENSOMYG00000000535)	ENSOMYG00000073284	ENSOMYG00000000751
Salmo	ANCESTRAL SPECIES		ENSGT00390000016384.l.a	ENSGT00940000158501.d.a.c	ENSGT00390000009566.g	ENSGT00550000074961.b.d	ENSGT00390000000224.j	ENSGT00530000063187.A.h	ENSGT00940000158674.h	ENSGT00940000153181.m.a	ENSGT01100000263505.b.b.a.b.a.a.a.b.a	ENSGT01000000220495	ENSGT00440000038585.c.c	ENSGT00940000156340.a.d.c	ENSGT00940000161345.c	ENSGT00940000166931.f	ENSGT00940000178900	ENSGT00530000063497.a.a.d ##22	ENSGT00940000156662.d.h.a	ENSGT00940000158483	ENSGT00940000153877.a.a.b.d	ENSGT00940000153464.A.a	ENSGT00940000164790.a	ENSGT00940000157207.a.a.g	ENSGT00450000040324.b.k	ENSGT00940000156811.b.c.b	ENSGT00730000111912.C.c	ENSGT00390000001098.i	ENSGT00940000158633.a.c	ENSGT00940000155841.c.b	ENSGT00940000165164.f	ENSGT00950000183190.a.b.b.c.a	ENSGT00950000183190.a.b.b.d
River trout	MODERN SPECIES	15	rpl35 (ENSSTUG00000010753)	arpc5lb (ENSSTUG00000010719)	SCAI (ENSSTUG00000010309)	ppp6c (ENSSTUG00000010278)	p2rx4a (ENSSTUG00000010155)	PTGES2 (ENSSTUG00000010131)	zer1 (ENSSTUG00000010071)	TBC1D13 (ENSSTUG00000009725)	RALGDS (ENSSTUG00000009533)	ENSSTUG00000009512	smarcb1b (ENSSTUG00000009408)	ENSSTUG00000009373	chchd10 (ENSSTUG00000009366)	ddt (ENSSTUG00000009355)	ENSSTUG00000009351	ODF2 (ENSSTUG00000009332) ##22	sptan1 (ENSSTUG00000007588)	dync2i2 (ENSSTUG00000007316)	setb (ENSSTUG00000007186)	uap1l1 (ENSSTUG00000007122)	ENSSTUG00000007108	ENSSTUG00000006984	slc25a25b (ENSSTUG00000006529)	naif1 (ENSSTUG00000006494)	ENSSTUG00000006491	eeig1b (ENSSTUG00000006445)	ENSSTUG00000006420	dpm2 (ENSSTUG00000006398)	PIP5KL1 (ENSSTUG00000006343)	sh3glb2b (ENSSTUG00000005677)	ENSSTUG00000005563
Atlantic salmon	MODERN SPECIES		SCAI (ENSSSAG00000117569)	ppp6c (ENSSSAG00000119839)	ENSSSAG00000065463	ENSSSAG00000065449	ENSSSAG00000064650	ENSSSAG00000114149	gnds (ENSSSAG00000063710)	ENSSSAG00000084890	ENSSSAG00000063690	ENSSSAG00000063684	smarcb1b (ENSSSAG00000063620)	ENSSSAG00000063600	chchd10 (ENSSSAG00000063591)	ENSSSAG00000110058	ddt (ENSSSAG00000063583)	ODF2 (ENSSSAG00000063563) ##22	ENSSSAG00000085437	sptan1 (ENSSSAG00000056139)	dync2i2 (ENSSSAG00000056027)	setb (ENSSSAG00000071236)	ENSSSAG00000055850	ENSSSAG00000050742	slc25a25b (ENSSSAG00000067692)	NAIF1 (ENSSSAG00000086186)	ENSSSAG00000085653	eeig1b (ENSSSAG00000088028)	ENSSSAG00000047449	DPM2 (ENSSSAG00000047417)	PIP5KL1 (ENSSSAG00000116681)	ENSSSAG00000047400	sh3glb2b (ENSSSAG00000096134)
Huchen	MODERN SPECIES	847	RPL35 (ENSHHUG00000049516)	arpc5lb (ENSHHUG00000049522)	SCAI (ENSHHUG00000049577)	ppp6c (ENSHHUG00000049596)	p2rx4a (ENSHHUG00000049607)	ENSHHUG00000049667	PTGES2 (ENSHHUG00000049673)	zer1 (ENSHHUG00000049684)	TBC1D13 (ENSHHUG00000049778)	RALGDS (ENSHHUG00000049819)	smarcb1b (ENSHHUG00000049941)	ENSHHUG00000050319	chchd10 (ENSHHUG00000050323)	ddt (ENSHHUG00000050326)	ENSHHUG00000050330	ODF2 (ENSHHUG00000050332) ##22	sptan1 (ENSHHUG00000050349)	dync2i2 (ENSHHUG00000050771)	setb (ENSHHUG00000050779)	ENSHHUG00000050793
Northern pike	MODERN SPECIES	13	arpc5lb (ENSELUG00000020487)	SCAI (ENSELUG00000020522)	ppp6c (ENSELUG00000020549)	p2rx4a (ENSELUG00000020578)	gstt1 (ENSELUG00000020605)	zer1 (ENSELUG00000020710)	TBC1D13 (ENSELUG00000020798)	RALGDS (ENSELUG00000020865)	ENSELUG00000026357	ENSELUG00000027151	smarcb1b (ENSELUG00000020934)	MMP11 (ENSELUG00000020945)	chchd10 (ENSELUG00000020960)	ddt (ENSELUG00000032496)	ENSELUG00000020963	ODF2 (ENSELUG00000021056) ##22	sptan1 (ENSELUG00000021139)	dync2i2 (ENSELUG00000021173)	setb (ENSELUG00000021202)	uap1l1 (ENSELUG00000021217)	zdhhc12b (ENSELUG00000021228)	ENSELUG00000021353	slc25a25b (ENSELUG00000001110)	naif1 (ENSELUG00000021476)	eeig1b (ENSELUG00000021521)	dpm2 (ENSELUG00000021540)	PIP5KL1 (ENSELUG00000021638)	sh3glb2b (ENSELUG00000021863)	ENSELUG00000028060	cdk5rap2 (ENSELUG00000021996)	NUP188 (ENSELUG00000022080)
Acanthomorphata	ANCESTRAL SPECIES	82	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000155946.c.b	ENSGT00940000154079.b	ENSGT00940000160616	ENSGT00940000157955.d.a	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503
Euacanthomorphacea	ANCESTRAL SPECIES	54	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000155946.c.b	ENSGT00940000154079.b	ENSGT00940000160616	ENSGT00940000157955.d.a	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503
Percomorphaceae	ANCESTRAL SPECIES	42	ENSGT00940000155945.i.a	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000155946.c.b	ENSGT00940000154079.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00940000178133	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000155946.c.b	ENSGT00940000154079.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503	ENSGT00940000159579	ENSGT00940000156114.c	ENSGT00440000033609.w	ENSGT00940000155464.a.a	ENSGT00390000006320	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00440000038585.c	ENSGT00530000063156.a.a.a	ENSGT00940000154079.b	ENSGT00940000155946.c.b	ENSGT00930000151016	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000178133	ENSGT00940000156261
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503	ENSGT00940000159579	ENSGT00940000156114.c	ENSGT00440000033609.w	ENSGT00940000155464.a.a	ENSGT00390000006320	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00440000038585.c	ENSGT00530000063156.a.a.a	ENSGT01060000248556.A.a.a.a.b.a.b
Pomacentridae	ANCESTRAL SPECIES	69	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503	ENSGT00940000159579	ENSGT00940000156114.c	ENSGT00440000033609.w	ENSGT00940000155464.a.a	ENSGT00390000006320	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00440000038585.c	ENSGT00530000063156.a.a.a	ENSGT01060000248556.A.a.a.a.b.a.b.k
Pomacentridae_A	ANCESTRAL SPECIES	46	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503	ENSGT00940000159579	ENSGT00940000156114.c	ENSGT00440000033609.w	ENSGT00940000155464.a.a	ENSGT00390000006320	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00440000038585.c	ENSGT00530000063156.a.a.a	ENSGT01060000248556.A.a.a.a.b.a.b.k	ENSGT00390000000642	ENSGT00940000157703	ENSGT01050000244857.C.b.g	ENSGT00550000074872	ENSGT00940000153947.A
Amphiprion	ANCESTRAL SPECIES	41	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503	ENSGT00940000159579	ENSGT00940000156114.c	ENSGT00440000033609.w	ENSGT00940000155464.a.a	ENSGT00390000006320	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b.e	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00440000038585.c	ENSGT00530000063156.a.a.a	ENSGT01060000248556.A.a.a.a.b.a.b.k.b	ENSGT01060000248556.A.a.a.a.b.a.b.k.a	ENSGT00390000000642	ENSGT00940000157703	ENSGT01050000244857.C.b.g	ENSGT00550000074872
Clown anemonefish	MODERN SPECIES	1674														ppp6c (ENSAOCG00000021985)	SCAI (ENSAOCG00000022088)	ODF2 (ENSAOCG00000022175) ##22	sptan1 (ENSAOCG00000022310)	dync2i2 (ENSAOCG00000022383)	setb (ENSAOCG00000022410)	ENSAOCG00000022439	zdhhc12b (ENSAOCG00000022466)	ENSAOCG00000022482	uap1l1 (ENSAOCG00000022515)	slc25a25b (ENSAOCG00000003646)	smarcb1b (ENSAOCG00000003660)	derl2 (ENSAOCG00000003672)	crata (ENSAOCG00000003681)	crata (ENSAOCG00000003747)	MAPKAP1 (ENSAOCG00000003777)
Orange clownfish	MODERN SPECIES	7	PIP5KL1 (ENSAPEG00000011523)	ENSAPEG00000011556	sh3glb2b (ENSAPEG00000011579)	zer1 (ENSAPEG00000011631)	TBC1D13 (ENSAPEG00000011699)	thnsl2 (ENSAPEG00000011758)	DQX1 (ENSAPEG00000011785)	smyd1a (ENSAPEG00000011859)	spra (ENSAPEG00000011895)	slc1a3b (ENSAPEG00000011901)	nadk2 (ENSAPEG00000011928)	skp2 (ENSAPEG00000012017)	MMP11 (ENSAPEG00000012144)	ppp6c (ENSAPEG00000012178)	SCAI (ENSAPEG00000012227)	ODF2 (ENSAPEG00000012298) ##22	sptan1 (ENSAPEG00000012321)	dync2i2 (ENSAPEG00000012474)	setb (ENSAPEG00000012509)	ENSAPEG00000012555	zdhhc12b (ENSAPEG00000012574)	uap1l1 (ENSAPEG00000012589)	slc25a25b (ENSAPEG00000012664)	smarcb1b (ENSAPEG00000012703)	derl2 (ENSAPEG00000012753)	crata (ENSAPEG00000012815)	crata (ENSAPEG00000012956)	MAPKAP1 (ENSAPEG00000013160)	megf10 (ENSAPEG00000013210)	chsy3 (ENSAPEG00000013296)	sptlc1 (ENSAPEG00000013308)
Spiny chromis	MODERN SPECIES	1902															SCAI (ENSAPOG00000010364)	ODF2 (ENSAPOG00000010246) ##22	sptan1 (ENSAPOG00000010187)	ENSAPOG00000009996	dync2i2 (ENSAPOG00000009979)
Bicolor damselfish	MODERN SPECIES	2451																ODF2 (ENSSPAG00000007717) ##22	sptan1 (ENSSPAG00000007604)	dync2i2 (ENSSPAG00000007574)
Cichlidae	ANCESTRAL SPECIES	98											ENSGT00390000006320	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772
Pseudocrenilabrinae	ANCESTRAL SPECIES	24	ENSGT00530000064469	ENSGT00940000157873	ENSGT00940000156579	ENSGT00940000159053	ENSGT00940000157484.y	ENSGT00940000160540	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT01050000244857.C.b	ENSGT00940000157703	ENSGT00390000006320	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772	ENSGT00940000157955.d.a	ENSGT00940000155945.i.a	ENSGT00390000000642	ENSGT00390000016543.d	ENSGT00530000063851.b	ENSGT00940000155742.a.a	ENSGT00940000159700
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	34	ENSGT00530000064469	ENSGT00940000157873	ENSGT00940000156579	ENSGT00940000159053	ENSGT00940000157484.y	ENSGT00940000160540	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT01050000244857.C.b	ENSGT00940000157703	ENSGT00390000006320	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772	ENSGT00940000157955.d.a	ENSGT00940000155945.i.a	ENSGT00390000000642	ENSGT00390000016543.d	ENSGT00530000063851.b	ENSGT00940000155742.a.a	ENSGT00940000159700
Haplochromini	ANCESTRAL SPECIES	40	ENSGT00530000064469	ENSGT00940000157873	ENSGT00940000156579	ENSGT00940000159053	ENSGT00940000157484.y	ENSGT00940000160540.q.a	ENSGT00940000153947.A.i.b	ENSGT00550000074872	ENSGT01050000244857.C.b	ENSGT00940000157703	ENSGT00390000006320	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772	ENSGT00940000157955.d.a	ENSGT00940000155945.i.a	ENSGT00390000000642	ENSGT00390000016543.d	ENSGT00530000063851.b	ENSGT00940000155742.a.a	ENSGT00940000159700
Burton s mouthbrooder	MODERN SPECIES	371	reep5 (ENSHBUG00000006137)	chd1 (ENSHBUG00000006189)	syk (ENSHBUG00000006268)	auh (ENSHBUG00000006290)	nfil3 (ENSHBUG00000006295)	ENSHBUG00000006304	ENSHBUG00000006311	sptlc1 (ENSHBUG00000006377)	chsy3 (ENSHBUG00000006410)	megf10 (ENSHBUG00000006507)	nadk2 (ENSHBUG00000006565)	skp2 (ENSHBUG00000006588)	ENSHBUG00000006617	ppp6c (ENSHBUG00000006644)	SCAI (ENSHBUG00000006704)	ODF2 (ENSHBUG00000006753) ##22	sptan1 (ENSHBUG00000006842)	dync2i2 (ENSHBUG00000006874)	setb (ENSHBUG00000006916)	zdhhc12b (ENSHBUG00000006929)	ENSHBUG00000006964	uap1l1 (ENSHBUG00000006938)	slc25a25b (ENSHBUG00000007042)	lmx1ba (ENSHBUG00000007069)	mvb12ba (ENSHBUG00000000174)	MAPKAP1 (ENSHBUG00000007136)	ENSHBUG00000007140	ENSHBUG00000007147	slc12a2 (ENSHBUG00000000179)	slc27a6 (ENSHBUG00000007344)	prrc1 (ENSHBUG00000007388)
Haplochromini_A	ANCESTRAL SPECIES	25	ENSGT00530000064469	ENSGT00940000157873	ENSGT00940000156579	ENSGT00940000159053	ENSGT00940000157484.y	ENSGT00940000160540.q.a	ENSGT00940000153947.A.i.b	ENSGT00550000074872	ENSGT01050000244857.C.b	ENSGT00940000157703	ENSGT00390000006320	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772	ENSGT00940000157955.d.a	ENSGT00940000155945.i.a	ENSGT00390000000642	ENSGT00390000016543.d	ENSGT00530000063851.b	ENSGT00940000155742.a.a	ENSGT00940000159700
P. nyererei	MODERN SPECIES	629							ENSPNYG00000023583	sptlc1 (ENSPNYG00000023581)	chsy3 (ENSPNYG00000023578)	megf10 (ENSPNYG00000023573)	nadk2 (ENSPNYG00000023568)	skp2 (ENSPNYG00000023565)	MMP11 (ENSPNYG00000023563)	ppp6c (ENSPNYG00000023561)	SCAI (ENSPNYG00000023559)	ODF2 (ENSPNYG00000023558) ##22	sptan1 (ENSPNYG00000023554)	dync2i2 (ENSPNYG00000023548)	setb (ENSPNYG00000023543)	ENSPNYG00000023541	zdhhc12b (ENSPNYG00000023539)	uap1l1 (ENSPNYG00000023536)	slc25a25b (ENSPNYG00000023533)	ENSPNYG00000023531	lmx1ba (ENSPNYG00000023527)	mvb12ba (ENSPNYG00000023524)	MAPKAP1 (ENSPNYG00000023522)	AJM1 (ENSPNYG00000023521)
Haplochromini_B	ANCESTRAL SPECIES	30	ENSGT00530000064469	ENSGT00940000157873	ENSGT00940000156579	ENSGT00940000159053	ENSGT00940000157484.y	ENSGT00940000160540.q.a	ENSGT00940000153947.A.i.b	ENSGT00550000074872	ENSGT01050000244857.C.b	ENSGT00940000157703	ENSGT00390000006320	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772	ENSGT00940000157955.d.a	ENSGT00940000155945.i.a	ENSGT00390000000642	ENSGT00390000016543.d	ENSGT00530000063851.b	ENSGT00940000155742.a.a	ENSGT00940000159700
Eastern happy	MODERN SPECIES	19	parvaa (ENSACLG00000012954)	ENSACLG00000012947	mical2b (ENSACLG00000012897)	PPFIBP2 (ENSACLG00000012559)	sb:cb470 (ENSACLG00000012520)	ENSACLG00000012417	ENSACLG00000012407	sptlc1 (ENSACLG00000012367)	chsy3 (ENSACLG00000012339)	megf10 (ENSACLG00000012182)	nadk2 (ENSACLG00000012117)	skp2 (ENSACLG00000012087)	MMP11 (ENSACLG00000012009)	ppp6c (ENSACLG00000011968)	SCAI (ENSACLG00000011846)	ODF2 (ENSACLG00000011802) ##22	sptan1 (ENSACLG00000011141)	dync2i2 (ENSACLG00000011111)	setb (ENSACLG00000011081)	ENSACLG00000011039	zdhhc12b (ENSACLG00000011023)	uap1l1 (ENSACLG00000010989)	slc25a25b (ENSACLG00000010882)	lmx1ba (ENSACLG00000010749)	mvb12ba (ENSACLG00000010732)	MAPKAP1 (ENSACLG00000010709)	ENSACLG00000009576	ENSACLG00000009572	slc12a2 (ENSACLG00000009245)	slc27a6 (ENSACLG00000009188)	ENSACLG00000009180
Zebra mbuna	MODERN SPECIES	1110	reep5 (ENSMZEG00005010944)	chd1 (ENSMZEG00005010957)	syk (ENSMZEG00005010985)	auh (ENSMZEG00005011002)	nfil3 (ENSMZEG00005011015)	ENSMZEG00005011026	ENSMZEG00005011053	sptlc1 (ENSMZEG00005011081)	chsy3 (ENSMZEG00005011108)	megf10 (ENSMZEG00005011122)	nadk2 (ENSMZEG00005011143)	skp2 (ENSMZEG00005011158)	MMP11 (ENSMZEG00005011166)	ppp6c (ENSMZEG00005011176)	SCAI (ENSMZEG00005011249)	ODF2 (ENSMZEG00005011283) ##22	sptan1 (ENSMZEG00005011296)	dync2i2 (ENSMZEG00005011355)	setb (ENSMZEG00005011423)	ENSMZEG00005011447	zdhhc12b (ENSMZEG00005011464)	slc25a25b (ENSMZEG00005011477)	ENSMZEG00005011493	mvb12ba (ENSMZEG00005011501)	MAPKAP1 (ENSMZEG00005011566)	ENSMZEG00005011584	ENSMZEG00005011587	slc12a2 (ENSMZEG00005011604)	slc27a6 (ENSMZEG00005011657)	prrc1 (ENSMZEG00005011682)	ENSMZEG00005011698
Lyretail cichlid	MODERN SPECIES	339	ENSNBRG00000007098	reep5 (ENSNBRG00000007088)	chd1 (ENSNBRG00000006860)	syk (ENSNBRG00000006773)	auh (ENSNBRG00000006746)	nfil3 (ENSNBRG00000006738)	ROR2 (ENSNBRG00000006714)	sptlc1 (ENSNBRG00000006666)	chsy3 (ENSNBRG00000006648)	megf10 (ENSNBRG00000006568)	nadk2 (ENSNBRG00000006379)	skp2 (ENSNBRG00000006265)	MMP11 (ENSNBRG00000006233)	ppp6c (ENSNBRG00000006193)	SCAI (ENSNBRG00000006140)	ODF2 (ENSNBRG00000006082) ##22	ENSNBRG00000006072	ENSNBRG00000006065	ENSNBRG00000006052	dync2i2 (ENSNBRG00000006020)	setb (ENSNBRG00000005989)	ENSNBRG00000005923	zdhhc12b (ENSNBRG00000005893)	uap1l1 (ENSNBRG00000005773)	slc25a25b (ENSNBRG00000005737)	ENSNBRG00000005726	lmx1ba (ENSNBRG00000005716)	mvb12ba (ENSNBRG00000005661)	MAPKAP1 (ENSNBRG00000005632)	AJM1 (ENSNBRG00000005613)	ENSNBRG00000005591
Nile tilapia	MODERN SPECIES	19	reep5 (ENSONIG00000042446)	chd1 (ENSONIG00000011219)	syk (ENSONIG00000011225)	auh (ENSONIG00000011227)	nfil3 (ENSONIG00000021308)	ENSONIG00000031390	ROR2 (ENSONIG00000011228)	sptlc1 (ENSONIG00000011229)	chsy3 (ENSONIG00000011233)	megf10 (ENSONIG00000011235)	nadk2 (ENSONIG00000011244)	skp2 (ENSONIG00000011248)	MMP11 (ENSONIG00000011252)	ppp6c (ENSONIG00000037191)	SCAI (ENSONIG00000011257)	ODF2 (ENSONIG00000011262) ##22	sptan1 (ENSONIG00000011270)	dync2i2 (ENSONIG00000011279)	setb (ENSONIG00000011282)	ENSONIG00000011289	zdhhc12 (ENSONIG00000027386)	uap1l1 (ENSONIG00000011298)	slc25a25b (ENSONIG00000011301)	lmx1ba (ENSONIG00000011305)	mvb12ba (ENSONIG00000011310)	MAPKAP1 (ENSONIG00000011314)	AJM1 (ENSONIG00000031602)	PAM (ENSONIG00000017497)	ENSONIG00000032452	ENSONIG00000040459	pomk (ENSONIG00000017496)
Midas cichlid	MODERN SPECIES	1323												skp2 (ENSACIG00000003189)	MMP11 (ENSACIG00000003165)	ppp6c (ENSACIG00000003144)	SCAI (ENSACIG00000003105)	ODF2 (ENSACIG00000003059) ##22	sptan1 (ENSACIG00000002938)	dync2i2 (ENSACIG00000002888)	setb (ENSACIG00000002868)	ENSACIG00000002821	zdhhc12b (ENSACIG00000002790)	uap1l1 (ENSACIG00000002770)	slc25a25b (ENSACIG00000002733)
Atherinomorphae	ANCESTRAL SPECIES	74												ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00440000038585.c	ENSGT00530000063156.a.a.a	ENSGT00940000154079.b	ENSGT00930000151016	ENSGT00950000183101.a.b.b.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	27	ENSGT00940000155402.a.b	ENSGT00950000183234	ENSGT00390000018651.a	ENSGT00940000159475.c	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000157207.a.a	ENSGT00940000153464.A.a	ENSGT00940000156902.b	ENSGT00940000164790.a	ENSGT00940000153877.a.a.b	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00940000165669	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00940000155841.c.b	ENSGT00940000177239	ENSGT00940000158633.a	ENSGT00390000001098	ENSGT00940000156811.b
Cyprinodontoidei	ANCESTRAL SPECIES	33	ENSGT00500000044904.a.b.e.a.l.d.b.b.b	ENSGT00500000044904.a.b.e.a.l.d.a.a.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000157207.a.a	ENSGT00940000153464.A.a	ENSGT00940000156902.b	ENSGT00940000164790.a	ENSGT00940000153877.a.a.b	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00940000171469	ENSGT00940000167171	ENSGT00550000074961.a	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00940000155841.c.b	ENSGT00940000177239	ENSGT00940000158633.a	ENSGT00390000001098
NAME_4	ANCESTRAL SPECIES	93	ENSGT00500000044904.a.b.e.a.l.d.b.b.b	ENSGT00500000044904.a.b.e.a.l.d.a.a.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000157207.a.a	ENSGT00940000153464.A.a	ENSGT00940000156902.b	ENSGT00940000164790.a	ENSGT00940000153877.a.a.b	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT01060000248544.b	ENSGT00940000167171	ENSGT00550000074961.a	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a
Sheepshead minnow	MODERN SPECIES	564	ENSCVAG00000008146	ENSCVAG00000000224	ENSCVAG00000008134	ENSCVAG00000008127	ENSCVAG00000008125	SMARCB1 (ENSCVAG00000007992)	slc25a25b (ENSCVAG00000007977)	ENSCVAG00000007880	zdhhc12b (ENSCVAG00000007871)	ENSCVAG00000007848	setb (ENSCVAG00000007776)	skp2 (ENSCVAG00000007764)	MMP11 (ENSCVAG00000007754)	PPP6C (ENSCVAG00000007745)	SCAI (ENSCVAG00000007719)	ODF2 (ENSCVAG00000007665) ##22	ENSCVAG00000007575	ENSCVAG00000007561	ENSCVAG00000007540	ENSCVAG00000007523	dync2i2 (ENSCVAG00000007497)	nadk2 (ENSCVAG00000007448)	slc1a3b (ENSCVAG00000007397)	spra (ENSCVAG00000007377)	smyd1a (ENSCVAG00000007374)	DQX1 (ENSCVAG00000007365)	thnsl2 (ENSCVAG00000007320)	ENSCVAG00000007269	ENSCVAG00000007256	ENSCVAG00000007251
Mummichog	MODERN SPECIES	271	ENSFHEG00000006408	ENSFHEG00000006411	ENSFHEG00000006425	ENSFHEG00000006430	derl2 (ENSFHEG00000006458)	smarcb1b (ENSFHEG00000000172)	slc25a25b (ENSFHEG00000006493)	uap1l1 (ENSFHEG00000006503)	zdhhc12b (ENSFHEG00000006516)	ENSFHEG00000006530	setb (ENSFHEG00000006560)	skp2 (ENSFHEG00000006566)	MMP11 (ENSFHEG00000006581)	PPP6C (ENSFHEG00000006612)	SCAI (ENSFHEG00000006745)	ODF2 (ENSFHEG00000006781) ##22	ENSFHEG00000000185	ENSFHEG00000006868	ENSFHEG00000007094	dync2i2 (ENSFHEG00000007112)	nadk2 (ENSFHEG00000007202)	slc1a3b (ENSFHEG00000007262)	smyd1a (ENSFHEG00000007290)	ENSFHEG00000007365	thnsl2 (ENSFHEG00000007378)	ENSFHEG00000007422
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00500000044904.a.b.e.a.l.d.b.b.b	ENSGT00500000044904.a.b.e.a.l.d.a.a.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000157207.a.a	ENSGT00940000153464.A.a	ENSGT00940000156902.b	ENSGT00940000164790.a.g	ENSGT00940000164790.a.h	ENSGT00940000153877.a.a.b	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00940000167171	ENSGT00550000074961.a	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a.b	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00940000155841.c.b	ENSGT00940000177239	ENSGT00940000158633.a	ENSGT00390000001098
Poecilia	ANCESTRAL SPECIES	53	ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a	ENSGT00500000044904.a.b.e.a.l.d.b.b.b	ENSGT00500000044904.a.b.e.a.l.d.a.a.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000157207.a.a	ENSGT00940000153464.A.a	ENSGT00940000156902.b	ENSGT00940000164790.a.g	ENSGT00940000153877.a.a.b	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00940000167171	ENSGT00550000074961.a	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a.b	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00940000155841.c.b	ENSGT00940000158633.a	ENSGT00390000001098	ENSGT00940000156811.b
NAME_6	ANCESTRAL SPECIES	102	ENSGT00500000044904.a.b.e.a.l.d.b.b.a.b	ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a.a	ENSGT00500000044904.a.b.e.a.l.d.a.a.a.a.b	ENSGT00500000044904.a.b.e.a.l.d.b.b.b	ENSGT00500000044904.a.b.e.a.l.d.a.a.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000157207.a.a	ENSGT00940000153464.A.a	ENSGT00940000156902.b	ENSGT00940000164790.a.g	ENSGT00940000153877.a.a.b	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a.b	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00940000155841.c.b	ENSGT00940000158633.a	ENSGT00390000001098	ENSGT00940000156811.b
Sailfin molly	MODERN SPECIES	788	ENSPLAG00000018499	ENSPLAG00000018516	ENSPLAG00000018524	ENSPLAG00000018528	derl2 (ENSPLAG00000018551)	smarcb1b (ENSPLAG00000018556)	slc25a25b (ENSPLAG00000018590)	uap1l1 (ENSPLAG00000018625)	zdhhc12b (ENSPLAG00000018670)	ENSPLAG00000018684	setb (ENSPLAG00000000580)	skp2 (ENSPLAG00000018697)	MMP11 (ENSPLAG00000018706)	PPP6C (ENSPLAG00000018741)	SCAI (ENSPLAG00000018780)	ODF2 (ENSPLAG00000018793) ##22	ENSPLAG00000018806	ENSPLAG00000018828	ENSPLAG00000018835	ENSPLAG00000000428	ENSPLAG00000018865	dync2i2 (ENSPLAG00000018879)	ENSPLAG00000018888	nadk2 (ENSPLAG00000018902)
Guppy	MODERN SPECIES	442	ENSPREG00000006226	ENSPREG00000006221	ENSPREG00000006216	derl2 (ENSPREG00000006206)	ENSPREG00000006196	smarcb1b (ENSPREG00000006179)	SLC25A23 (ENSPREG00000006162)	uap1l1 (ENSPREG00000006147)	zdhhc12b (ENSPREG00000006134)	ENSPREG00000006079	setb (ENSPREG00000006032)	ENSPREG00000005998	MMP11 (ENSPREG00000005982)	PPP6C (ENSPREG00000005967)	SCAI (ENSPREG00000005929)	ENSPREG00000005880 ##22	EFNA5 (ENSPREG00000005858)	PIGO (ENSPREG00000005809)	stoml2 (ENSPREG00000005792)	ENSPREG00000005759	ENSPREG00000005616	ENSPREG00000005565	ENSPREG00000005524	ENSPREG00000005507	ENSPREG00000005501	ENSPREG00000005473	ENSPREG00000001901	ENSPREG00000001622	ENSPREG00000001498	gadd45gb.1 (ENSPREG00000001461)	ENSPREG00000001446
Platyfish	MODERN SPECIES	22	derl2 (ENSXMAG00000016828)	smarcb1b (ENSXMAG00000016803)	slc25a25b (ENSXMAG00000016773)	uap1l1 (ENSXMAG00000016749)	zdhhc12b (ENSXMAG00000016743)	ENSXMAG00000026234	ENSXMAG00000022015	ENSXMAG00000013697	setb (ENSXMAG00000013718)	ENSXMAG00000013731	MMP11 (ENSXMAG00000013737)	PPP6C (ENSXMAG00000013741)	SCAI (ENSXMAG00000021091)	ENSXMAG00000026744	ENSXMAG00000021401	ODF2 (ENSXMAG00000008364) ##22	ENSXMAG00000027933	ENSXMAG00000028933	ENSXMAG00000023116	dync2i2 (ENSXMAG00000010750)	nadk2 (ENSXMAG00000010743)	slc1a3b (ENSXMAG00000010727)	ENSXMAG00000028504	spra (ENSXMAG00000010724)	smyd1a (ENSXMAG00000010713)	DQX1 (ENSXMAG00000010692)	thnsl2 (ENSXMAG00000010684)	ENSXMAG00000019894	ENSXMAG00000028669	TBC1D13 (ENSXMAG00000003778)	zer1 (ENSXMAG00000003783)
Aplocheiloidei	ANCESTRAL SPECIES	168											ENSGT00940000153877.a.a.b	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00940000165669	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00390000006320	ENSGT00940000155464.a.a	ENSGT00440000033609.w	ENSGT00940000156114.c	ENSGT00940000159579	ENSGT00940000158503	ENSGT00940000158674	ENSGT00530000063187.A
Turquoise killifish	MODERN SPECIES	1611	HSDL2 (ENSNFUG00015001247)	capslb (ENSNFUG00015001281)	ENSNFUG00015001290	LMBRD2B (ENSNFUG00015001319)	ppp1r3b (ENSNFUG00015001421)	uap1l1 (ENSNFUG00015001551)	slc25a25b (ENSNFUG00015001611)	ENSNFUG00015001728	SMARCB1 (ENSNFUG00015001731)	derl2 (ENSNFUG00015001746)	setb (ENSNFUG00015001763)	ENSNFUG00015001770	skp2 (ENSNFUG00015001788)	PPP6C (ENSNFUG00015001829)	SCAI (ENSNFUG00015001894)	ODF2 (ENSNFUG00015002036) ##22	sptan1 (ENSNFUG00015002171)	DYNC2I1 (ENSNFUG00015002609)	nadk2 (ENSNFUG00015002618)	SLC1A3B (ENSNFUG00015002661)	SPR (ENSNFUG00015002844)	smyd1a (ENSNFUG00015002862)	ENSNFUG00015002904	thnsl2 (ENSNFUG00015002919)	TBC1D13 (ENSNFUG00015002932)	ZER1 (ENSNFUG00015002969)	ENSNFUG00015003041	ENSNFUG00015003046	rgs7bpb (ENSNFUG00015003052)	c6 (ENSNFUG00015003065)	ENSNFUG00015003092
Oryzias	ANCESTRAL SPECIES	9	ENSGT00940000166792	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00390000011873.f	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000154079.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000157207.a.a	ENSGT00390000006096.a.b	ENSGT00940000157006	ENSGT01030000234542.b.b.a.a.a.a
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00940000154909.b.a	ENSGT00940000165064.b	ENSGT00390000008694.b.a	ENSGT00940000166031	ENSGT01030000234527.A.a.b.a.a.c.a	ENSGT00390000013415.a.b.jb	ENSGT00950000182864.a.b.b.a.a.a	ENSGT00940000155591.j	ENSGT01030000234614.B.a.a.a.t	ENSGT00940000160428.b.b	ENSGT00390000011873.f	ENSGT00390000007918	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000154079.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000157207.a.a	ENSGT00390000006096.a.b	ENSGT00940000157006	ENSGT01030000234542.b.b.a.a.a.a
Javanese ricefish	MODERN SPECIES	3	LRRTM4 (ENSOJAG00000020491)	ENSOJAG00000020473	tmem230a (ENSOJAG00000020456)	ENSOJAG00000020448	dpysl2b (ENSOJAG00000018337)	bnip3lb (ENSOJAG00000018109)	ppp2r2ab (ENSOJAG00000017346)	gsna (ENSOJAG00000015905)	stom (ENSOJAG00000015697)	barhl1a (ENSOJAG00000015664)	GTF3C4 (ENSOJAG00000015654)	skp2 (ENSOJAG00000015640)	MMP11 (ENSOJAG00000015610)	ppp6c (ENSOJAG00000015594)	SCAI (ENSOJAG00000015411)	ENSOJAG00000015391 ##22	dync2i2 (ENSOJAG00000010843)	setb (ENSOJAG00000010833)	ENSOJAG00000009570	zdhhc12b (ENSOJAG00000009441)	uap1l1 (ENSOJAG00000009419)	ENSOJAG00000009406	fbxw2 (ENSOJAG00000009386)	ralgps1 (ENSOJAG00000009088)	derl2 (ENSOJAG00000009021)	smarcb1b (ENSOJAG00000008974)	slc25a25b (ENSOJAG00000008215)	hmgcs1 (ENSOJAG00000007951)	tln1 (ENSOJAG00000005590)	tpm2 (ENSOJAG00000005132)	DENND1A (ENSOJAG00000004452)
Indian medaka	MODERN SPECIES	677															SCAI (ENSOMEG00000000534)	ODF2 (ENSOMEG00000020421) ##22	ENSOMEG00000020367	ENSOMEG00000020347	ENSOMEG00000020337	ENSOMEG00000020320	dync2i2 (ENSOMEG00000020274)	setb (ENSOMEG00000020148)	ENSOMEG00000020078	zdhhc12b (ENSOMEG00000020031)	uap1l1 (ENSOMEG00000020003)	ENSOMEG00000019960
Oryzias_a	ANCESTRAL SPECIES	126																ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000154079.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c
Japanese Medaka HdrR	MODERN SPECIES	3	ENSORLG00000027766	ENSORLG00000022727	ENSORLG00000013256	ENSORLG00000027560	MAPKAP1 (ENSORLG00000013242)	mvb12ba (ENSORLG00000013209)	lmx1ba (ENSORLG00000026058)	nr5a1b (ENSORLG00000013196)	psmb7 (ENSORLG00000013170)	NEK6 (ENSORLG00000013149)	DENND1A (ENSORLG00000013124)	tpm2 (ENSORLG00000013079)	tln1 (ENSORLG00000013042)	hmgcs1 (ENSORLG00000012898)	SLC25A25 (ENSORLG00000012877)	ODF2 (ENSORLG00000012850) ##22	ENSORLG00000023857	ENSORLG00000029984	ENSORLG00000023290	ENSORLG00000012823	dync2i2 (ENSORLG00000012774)	setb (ENSORLG00000012750)	ENSORLG00000012736	zdhhc12b (ENSORLG00000012692)	uap1l1 (ENSORLG00000012682)	ENSORLG00000012647	fbxw2 (ENSORLG00000012631)	ralgps1 (ENSORLG00000012614)	derl2 (ENSORLG00000012591)	ENSORLG00000012553	SCAI (ENSORLG00000012465)
Chinese medaka	MODERN SPECIES	4200																ENSOSIG00000013769 ##22
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00940000155152.e	ENSGT00940000178133	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000155946.c.b	ENSGT00940000154079.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00940000155945.i.a	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000155946.c.b	ENSGT00940000154079.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00940000155945.i.a	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000155946.c.b	ENSGT00940000154079.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00940000155945.i.a	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000155946.c.b	ENSGT00940000154079.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00940000155945.i.a	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000154079.b	ENSGT00940000155946.c.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00940000155945.i.a	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000154079.b	ENSGT00940000155946.c.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503
European seabass	MODERN SPECIES	9	mvb12ba (ENSDLAG00005033573)	nr5a1b (ENSDLAG00005011809)	psmb7 (ENSDLAG00005011418)	NEK6 (ENSDLAG00005031059)	DENND1A (ENSDLAG00005033425)	CRB2 (ENSDLAG00005011489)	ENSDLAG00005011480	ENSDLAG00005011408	ENSDLAG00005011403	ENSDLAG00005011315	ENSDLAG00005010086	ENSDLAG00005010024	ENSDLAG00005009963	ENSDLAG00005031144	ENSDLAG00005009820	ODF2 (ENSDLAG00005009791) ##22	sptan1 (ENSDLAG00005007570)	dync2i2 (ENSDLAG00005033129)	setb (ENSDLAG00005010991)	ENSDLAG00005004547	zdhhc12b (ENSDLAG00005004355)	uap1l1 (ENSDLAG00005004297)	slc25a25b (ENSDLAG00005030118)	NAIF1 (ENSDLAG00005027321)	eeig1b (ENSDLAG00005014575)	dpm2 (ENSDLAG00005029824)	PIP5KL1 (ENSDLAG00005028420)	ENSDLAG00005014170	ENSDLAG00005014115	ENSDLAG00005014089	ENSDLAG00005014084
Large yellow croaker	MODERN SPECIES		lmx1ba (ENSLCRG00005023305)	nr5a1b (ENSLCRG00005023306)	psmb7 (ENSLCRG00005023309)	NEK6 (ENSLCRG00005023319)	DENND1A (ENSLCRG00005023332)	CRB2 (ENSLCRG00005023337)	fbxw2 (ENSLCRG00005023339)	ralgps1 (ENSLCRG00005023340)	angptl2a (ENSLCRG00005023341)	ENSLCRG00005023345	derl2 (ENSLCRG00005023358)	smarcb1b (ENSLCRG00005023360)	MMP11 (ENSLCRG00005023372)	ppp6c (ENSLCRG00005023374)	SCAI (ENSLCRG00005023378)	ODF2 (ENSLCRG00005023382) ##22	sptan1 (ENSLCRG00005023399)	dync2i2 (ENSLCRG00005023410)	setb (ENSLCRG00005023412)	ENSLCRG00005023415	zdhhc12b (ENSLCRG00005023435)	uap1l1 (ENSLCRG00005001461)	arglu1a (ENSLCRG00005001497)	efnb2a (ENSLCRG00005001511)	ENSLCRG00005001521	gtpbp8 (ENSLCRG00005001536)	slc10a2 (ENSLCRG00005001550)	ENSLCRG00005001566	inhbb (ENSLCRG00005001583)	ENSLCRG00005001637	ENSLCRG00005002008
Gilthead seabream	MODERN SPECIES	3	nr5a1b (ENSSAUG00010021437)	ENSSAUG00010021440	psmb7 (ENSSAUG00010021443)	NEK6 (ENSSAUG00010021447)	DENND1A (ENSSAUG00010021584)	CRB2 (ENSSAUG00010021782)	fbxw2 (ENSSAUG00010021793)	ralgps1 (ENSSAUG00010021810)	ENSSAUG00010021852	ENSSAUG00010021889	derl2 (ENSSAUG00010022432)	smarcb1b (ENSSAUG00010022435)	MMP11 (ENSSAUG00010022437)	ppp6c (ENSSAUG00010022438)	SCAI (ENSSAUG00010022449)	ODF2 (ENSSAUG00010022606) ##22	sptan1 (ENSSAUG00010022637)	dync2i2 (ENSSAUG00010022677)	setb (ENSSAUG00010022693)	ENSSAUG00010022795	zdhhc12b (ENSSAUG00010024384)	uap1l1 (ENSSAUG00010024386)	slc25a25b (ENSSAUG00010024388)	uap1l1 (ENSSAUG00010024391)	slc25a25b (ENSSAUG00010024395)	ENSSAUG00010024426	naif1 (ENSSAUG00010024427)	eeig1b (ENSSAUG00010024428)	dpm2 (ENSSAUG00010024430)	PIP5KL1 (ENSSAUG00010024431)	ENSSAUG00010024432
Perciformes	ANCESTRAL SPECIES	32											ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674
Perciformes_a	ANCESTRAL SPECIES	12											ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674
Pike perch	MODERN SPECIES	72										pomk (ENSSLUG00000007790)	PAM (ENSSLUG00000006851)	SCAI (ENSSLUG00000006150)	ppp6c (ENSSLUG00000006082)	SMARCB1 (ENSSLUG00000006060)	derl2 (ENSSLUG00000006051)	ODF2 (ENSSLUG00000006042) ##22	sptan1 (ENSSLUG00000002800)	dync2i2 (ENSSLUG00000002600)	setb (ENSSLUG00000002592)	ENSSLUG00000001849	zdhhc12b (ENSSLUG00000021865)	uap1l1 (ENSSLUG00000021860)	slc25a25b (ENSSLUG00000020955)	naif1 (ENSSLUG00000020899)	eeig1b (ENSSLUG00000020896)	dpm2 (ENSSLUG00000020891)	PIP5KL1 (ENSSLUG00000020888)	ENSSLUG00000020886	SH3GLB2 (ENSSLUG00000020861)	zer1 (ENSSLUG00000020829)	TBC1D13 (ENSSLUG00000020760)
Channel bull blenny	MODERN SPECIES	3	LYZ (ENSCGOG00000004096)	ENSCGOG00000004118	ENSCGOG00000004141	dcc (ENSCGOG00000004151)	tdgf1 (ENSCGOG00000004329)	dnajc25 (ENSCGOG00000004341)	ENSCGOG00000004348	ENSCGOG00000004362	ENSCGOG00000004461	ENSCGOG00000004468	derl2 (ENSCGOG00000004474)	smarcb1b (ENSCGOG00000004619)	MMP11 (ENSCGOG00000004779)	ppp6c (ENSCGOG00000004845)	SCAI (ENSCGOG00000004940)	ODF2 (ENSCGOG00000004985) ##22	sptan1 (ENSCGOG00000005144)	dync2i2 (ENSCGOG00000012767)	ENSCGOG00000012771	naif1 (ENSCGOG00000012773)	eeig1b (ENSCGOG00000012777)	dpm2 (ENSCGOG00000012801)	PIP5KL1 (ENSCGOG00000012803)	ENSCGOG00000012805	sh3glb2b (ENSCGOG00000012822)	zer1 (ENSCGOG00000013452)	TBC1D13 (ENSCGOG00000013802)	thnsl2 (ENSCGOG00000013935)	DQX1 (ENSCGOG00000013940)	smyd1a (ENSCGOG00000014145)	spra (ENSCGOG00000014209)
Cottioidei	ANCESTRAL SPECIES	31							ENSGT00940000156369	ENSGT00390000004945	ENSGT00390000005782	ENSGT00530000064469	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503
Stickleback	MODERN SPECIES	13	SLC27A3 (ENSGACG00000018368)	wdr91 (ENSGACG00000018369)	ENSGACG00000018370	THAP1 (ENSGACG00000018371)	june (ENSGACG00000018373)	PAM (ENSGACG00000018375)	pomk (ENSGACG00000018381)	macir (ENSGACG00000018385)	ENSGACG00000018388	ENSGACG00000018393	derl2 (ENSGACG00000018394)	smarcb1b (ENSGACG00000018395)	MMP11 (ENSGACG00000018397)	ppp6c (ENSGACG00000018399)	SCAI (ENSGACG00000018402)	ODF2 (ENSGACG00000018403) ##22	sptan1 (ENSGACG00000018404)	ENSGACG00000018423	dync2i2 (ENSGACG00000018424)	setb (ENSGACG00000018427)	ENSGACG00000018428	zdhhc12b (ENSGACG00000018437)	uap1l1 (ENSGACG00000018441)	slc25a25b (ENSGACG00000018446)	naif1 (ENSGACG00000018458)	eeig1b (ENSGACG00000018460)	dpm2 (ENSGACG00000018462)	PIP5KL1 (ENSGACG00000018468)	sh3glb2b (ENSGACG00000018470)	zer1 (ENSGACG00000018482)	TBC1D13 (ENSGACG00000018486)
Lumpfish	MODERN SPECIES	3	ENSCLMG00005004184	ENSCLMG00005004185	ENSCLMG00005004187	wdr91 (ENSCLMG00005004190)	ENSCLMG00005004195	june (ENSCLMG00005004197)	SMARCB1 (ENSCLMG00005004199)	derl2 (ENSCLMG00005004204)	ENSCLMG00005004205	macir (ENSCLMG00005004206)	pomk (ENSCLMG00005004207)	PAM (ENSCLMG00005004210)	MMP11 (ENSCLMG00005005414)	PPP6C (ENSCLMG00005005416)	SCAI (ENSCLMG00005005420)	ODF2 (ENSCLMG00005005664) ##22	ENSCLMG00005005969	ENSCLMG00005005970	sptan1 (ENSCLMG00005005989)	dync2i2 (ENSCLMG00005006786)	setb (ENSCLMG00005006788)	ENSCLMG00005006823	zdhhc12b (ENSCLMG00005012004)	uap1l1 (ENSCLMG00005012007)	slc25a25b (ENSCLMG00005012030)	naif1 (ENSCLMG00005013142)	dpm2 (ENSCLMG00005013143)	PIP5KL1 (ENSCLMG00005013144)	sh3glb2b (ENSCLMG00005013145)	zer1 (ENSCLMG00005013170)	TBC1D13 (ENSCLMG00005013171)
Ballan wrasse	MODERN SPECIES	140											derl2 (ENSLBEG00000019394)	smarcb1b (ENSLBEG00000019421)	MMP11 (ENSLBEG00000019474)	ppp6c (ENSLBEG00000019494)	SCAI (ENSLBEG00000019544)	ODF2 (ENSLBEG00000019603) ##22	sptan1 (ENSLBEG00000019669)	dync2i2 (ENSLBEG00000019826)	setb (ENSLBEG00000019863)	ENSLBEG00000019912	zdhhc12b (ENSLBEG00000019981)	uap1l1 (ENSLBEG00000020043)	slc25a25b (ENSLBEG00000020076)	ENSLBEG00000020105	naif1 (ENSLBEG00000020119)	eeig1b (ENSLBEG00000020139)	dpm2 (ENSLBEG00000020174)	PIP5KL1 (ENSLBEG00000020240)	sh3glb2b (ENSLBEG00000020325)	zer1 (ENSLBEG00000020358)	TBC1D13 (ENSLBEG00000020403)
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00940000178133	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000155946.c.b	ENSGT00940000154079.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A
Carangaria	ANCESTRAL SPECIES	17	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00940000178133	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000154079.b	ENSGT00940000155946.c.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674
Carangaria_A	ANCESTRAL SPECIES	43	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00940000178133	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000154079.b	ENSGT00940000155946.c.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503
Seriola	ANCESTRAL SPECIES	33	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00940000178133	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000154079.b	ENSGT00940000155946.c.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000158503
Greater amberjack	MODERN SPECIES	34	nr5a1b (ENSSDUG00000019262)	psmb7 (ENSSDUG00000019641)	NEK6 (ENSSDUG00000019649)	DENND1A (ENSSDUG00000019675)	CRB2 (ENSSDUG00000019694)	fbxw2 (ENSSDUG00000019749)	ralgps1 (ENSSDUG00000019795)	angptl2a (ENSSDUG00000019900)	ENSSDUG00000019909	ENSSDUG00000019917	derl2 (ENSSDUG00000019927)	smarcb1b (ENSSDUG00000019943)	MMP11 (ENSSDUG00000019979)	ppp6c (ENSSDUG00000020000)	SCAI (ENSSDUG00000020037)	ODF2 (ENSSDUG00000020101) ##22	sptan1 (ENSSDUG00000020131)	dync2i2 (ENSSDUG00000020218)	setb (ENSSDUG00000020263)	ENSSDUG00000020309	zdhhc12b (ENSSDUG00000020411)	uap1l1 (ENSSDUG00000020442)	naif1 (ENSSDUG00000020525)	eeig1b (ENSSDUG00000020536)	dpm2 (ENSSDUG00000020574)	PIP5KL1 (ENSSDUG00000020594)	ENSSDUG00000020616	sh3glb2b (ENSSDUG00000020624)	zer1 (ENSSDUG00000020653)	TBC1D13 (ENSSDUG00000020716)	thnsl2 (ENSSDUG00000020743)
Yellowtail amberjack	MODERN SPECIES	3288	NEK6 (ENSSLDG00000021730)	ENSSLDG00000021744	DENND1A (ENSSLDG00000021751)	ENSSLDG00000021771	CRB2 (ENSSLDG00000021781)	fbxw2 (ENSSLDG00000021797)	ralgps1 (ENSSLDG00000021826)	angptl2a (ENSSLDG00000021944)	ENSSLDG00000021951	ENSSLDG00000021963	derl2 (ENSSLDG00000021972)	smarcb1b (ENSSLDG00000021986)	MMP11 (ENSSLDG00000022020)	ppp6c (ENSSLDG00000022033)	SCAI (ENSSLDG00000022050)	ODF2 (ENSSLDG00000022094) ##22	sptan1 (ENSSLDG00000022130)	dync2i2 (ENSSLDG00000022199)	setb (ENSSLDG00000022255)	ENSSLDG00000022274	zdhhc12b (ENSSLDG00000022302)	uap1l1 (ENSSLDG00000022312)	slc25a25b (ENSSLDG00000022345)	naif1 (ENSSLDG00000022387)	eeig1b (ENSSLDG00000022396)	dpm2 (ENSSLDG00000022422)	PIP5KL1 (ENSSLDG00000022435)	sh3glb2b (ENSSLDG00000022495)	zer1 (ENSSLDG00000022562)	TBC1D13 (ENSSLDG00000022620)	thnsl2 (ENSSLDG00000022667)
Barramundi perch	MODERN SPECIES	228								angptl2a (ENSLCAG00010013457)	ralgps1 (ENSLCAG00010013452)	ENSLCAG00010013447	derl2 (ENSLCAG00010013425)	smarcb1b (ENSLCAG00010013407)	MMP11 (ENSLCAG00010013394)	ppp6c (ENSLCAG00010013388)	SCAI (ENSLCAG00010013254)	ODF2 (ENSLCAG00010013237) ##22	ENSLCAG00010013235	sptan1 (ENSLCAG00010013217)	dync2i2 (ENSLCAG00010013209)	setb (ENSLCAG00010013204)	ENSLCAG00010013196	zdhhc12b (ENSLCAG00010013195)	uap1l1 (ENSLCAG00010013191)	slc25a25b (ENSLCAG00010013135)	reep5 (ENSLCAG00010013112)	chd1 (ENSLCAG00010012142)	syk (ENSLCAG00010011881)	auh (ENSLCAG00010011865)	nfil3 (ENSLCAG00010011862)	ENSLCAG00010011858	ROR2 (ENSLCAG00010011848)
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00940000153139.B.a	ENSGT00940000156168.B	ENSGT00940000155068.a.a	ENSGT00940000155847.c	ENSGT00940000164699	ENSGT00940000157038.a.b	ENSGT00940000156732.a.a	ENSGT00940000161915.b	ENSGT00940000155657	ENSGT00410000025802	ENSGT00940000154704.c.c	ENSGT00390000005989.b.b	ENSGT00940000155860.b	ENSGT00940000154314.a	ENSGT00390000009948.d	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00940000177772	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674
Turbot	MODERN SPECIES	7	ENSSMAG00000009149	ENSSMAG00000021812	ENSSMAG00000009165	ENSSMAG00000009168	ENSSMAG00000034909	ENSSMAG00000009197	ENSSMAG00000009215	wdr45 (ENSSMAG00000009227)	ENSSMAG00000034455	ENSSMAG00000009265	stc1l (ENSSMAG00000009300)	ENSSMAG00000009342	ENSSMAG00000028483	kctd9b (ENSSMAG00000009386)	ENSSMAG00000009433	ODF2 (ENSSMAG00000009452) ##22	SPTAN1 (ENSSMAG00000009496)	dync2i2 (ENSSMAG00000010007)	SET (ENSSMAG00000010018)	ENSSMAG00000010189	zdhhc12b (ENSSMAG00000010199)	uap1l1 (ENSSMAG00000010208)	slc25a25b (ENSSMAG00000010217)	NAIF1 (ENSSMAG00000010261)	eeig1b (ENSSMAG00000010278)	dpm2 (ENSSMAG00000031774)	PIP5KL1 (ENSSMAG00000010364)	ENSSMAG00000010377	ENSSMAG00000010445	ENSSMAG00000010520	ENSSMAG00000010558
Tongue sole	MODERN SPECIES	5	ccni (ENSCSEG00000001583)	ENSCSEG00000001595	ENSCSEG00000001602	ENSCSEG00000001617	ENSCSEG00000001635	tcf7l1a (ENSCSEG00000001637)	dbnla (ENSCSEG00000001644)	adra2b (ENSCSEG00000001650)	wdr45 (ENSCSEG00000001652)	ENSCSEG00000001661	ENSCSEG00000001664	stc1l (ENSCSEG00000001669)	FGFR1 (ENSCSEG00000001694)	kctd9b (ENSCSEG00000001850)	marchf5l (ENSCSEG00000001860)	ODF2 (ENSCSEG00000001866) ##22	sptan1 (ENSCSEG00000001900)	dync2i2 (ENSCSEG00000002119)	ENSCSEG00000002134	ENSCSEG00000002141	dnajc25 (ENSCSEG00000002144)	ENSCSEG00000002148	zgc:113625 (ENSCSEG00000002150)	tdgf1 (ENSCSEG00000002152)	ENSCSEG00000002156	ENSCSEG00000002163	kpnb3 (ENSCSEG00000002177)	unc50 (ENSCSEG00000002219)	ENSCSEG00000002222	ndufs1 (ENSCSEG00000002226)	creb3l1 (ENSCSEG00000002240)
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00940000155945.i.a	ENSGT00940000157955.d.a	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00950000183101.a.b.b.a.b	ENSGT00930000151016	ENSGT00940000155946.c.b	ENSGT00940000154079.b	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674
Zig-zag eel	MODERN SPECIES	3	nr5a1b (ENSMAMG00000022705)	psmb7 (ENSMAMG00000025130)	NEK6 (ENSMAMG00000022697)	ENSMAMG00000025869	DENND1A (ENSMAMG00000022689)	CRB2 (ENSMAMG00000022685)	ENSMAMG00000022682	ENSMAMG00000022679	ENSMAMG00000024754	ENSMAMG00000022674	ENSMAMG00000022672	ENSMAMG00000022671	ENSMAMG00000022669	ENSMAMG00000022668	ENSMAMG00000022666	ODF2 (ENSMAMG00000022664) ##22	sptan1 (ENSMAMG00000022659)	dync2i2 (ENSMAMG00000022658)	setb (ENSMAMG00000022655)	ENSMAMG00000022654	uap1l1 (ENSMAMG00000022652)	slc25a25b (ENSMAMG00000022651)	NAIF1 (ENSMAMG00000024944)	eeig1b (ENSMAMG00000022649)	dpm2 (ENSMAMG00000022648)	PIP5KL1 (ENSMAMG00000022647)	ENSMAMG00000022646	ENSMAMG00000022645	ENSMAMG00000022644	ENSMAMG00000022639	ENSMAMG00000022638
Anabantoidei	ANCESTRAL SPECIES	32	ENSGT00940000159053	ENSGT00940000157484	ENSGT00940000160540	ENSGT00940000153947.A	ENSGT00550000074872	ENSGT00940000157703	ENSGT00940000161073	ENSGT00390000003837	ENSGT00940000154412.A	ENSGT00940000157199	ENSGT00530000063156.a.a.a	ENSGT00440000038585.c	ENSGT00940000156340.a.d	ENSGT00550000074961.b	ENSGT00390000009566	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d.f	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00940000164790.a	ENSGT00940000156902.b	ENSGT00940000153464.A.a	ENSGT00940000157207.a.a	ENSGT00450000040324.b.n	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000177239	ENSGT00940000155841.c.b	ENSGT00530000063187.A	ENSGT00940000158674
Climbing perch	MODERN SPECIES	13	syk (ENSATEG00000010626)	auh (ENSATEG00000010571)	nfil3 (ENSATEG00000010562)	ROR2 (ENSATEG00000010541)	sptlc1 (ENSATEG00000010496)	megf10 (ENSATEG00000010425)	ENSATEG00000010405	ENSATEG00000010370	CTXN3 (ENSATEG00000010357)	ENSATEG00000010319	ENSATEG00000028789	ENSATEG00000010245	ENSATEG00000025171	ENSATEG00000010188	ENSATEG00000010138	ODF2 (ENSATEG00000010104) ##22	sptan1 (ENSATEG00000009938)	dync2i2 (ENSATEG00000009904)	setb (ENSATEG00000009873)	ENSATEG00000009853	zdhhc12b (ENSATEG00000029454)	uap1l1 (ENSATEG00000009749)	slc25a25b (ENSATEG00000028871)	NAIF1 (ENSATEG00000009671)	eeig1b (ENSATEG00000009622)	dpm2 (ENSATEG00000025188)	PIP5KL1 (ENSATEG00000009568)	ENSATEG00000027150	ENSATEG00000009529	ENSATEG00000009465	TBC1D13 (ENSATEG00000009405)
Pinecone sodierfish	MODERN SPECIES	3	nkx6.1 (ENSMMDG00005022979)	rpl17 (ENSMMDG00005022980)	ENSMMDG00005022986	lmbrd2b (ENSMMDG00005023002)	capslb (ENSMMDG00005023108)	ENSMMDG00005023113	myo5b (ENSMMDG00005023295)	cfap53 (ENSMMDG00005024746)	ENSMMDG00005024747	ENSMMDG00005024748	derl2 (ENSMMDG00005024749)	smarcb1b (ENSMMDG00005024750)	ENSMMDG00005024751	ppp6c (ENSMMDG00005024752)	SCAI (ENSMMDG00005024753)	ODF2 (ENSMMDG00005024754) ##22	sptan1 (ENSMMDG00005024759)	dync2i2 (ENSMMDG00005024903)	setb (ENSMMDG00005024909)	ENSMMDG00005024910	zdhhc12b (ENSMMDG00005025043)	uap1l1 (ENSMMDG00005025044)	slc25a25b (ENSMMDG00005025045)	naif1 (ENSMMDG00005025046)	eeig1b (ENSMMDG00005025047)	dpm2 (ENSMMDG00005001197)	PIP5KL1 (ENSMMDG00005001215)	sh3glb2b (ENSMMDG00005001246)	zer1 (ENSMMDG00005001304)	TBC1D13 (ENSMMDG00005001336)	thnsl2 (ENSMMDG00005001365)
Cod	MODERN SPECIES	17	megf10 (ENSGMOG00000013000)	prrc1 (ENSGMOG00000004373)	slc12a2 (ENSGMOG00000004314)	ENSGMOG00000003986	slc27a6 (ENSGMOG00000003965)	nr5a1b (ENSGMOG00000032636)	PSMB7 (ENSGMOG00000006798)	ENSGMOG00000006766	CRB2 (ENSGMOG00000006738)	ENSGMOG00000006730	ENSGMOG00000006711	ENSGMOG00000008607	ENSGMOG00000008614	ENSGMOG00000008624	ENSGMOG00000008631	ODF2 (ENSGMOG00000008644) ##22	SPTAN1 (ENSGMOG00000008663)	dync2i2 (ENSGMOG00000008718)	ENSGMOG00000008739	ENSGMOG00000008752	zdhhc12b (ENSGMOG00000008781)	uap1l1 (ENSGMOG00000008793)	slc25a25b (ENSGMOG00000008812)	NAIF1 (ENSGMOG00000008831)	dpm2 (ENSGMOG00000023612)	PIP5KL1 (ENSGMOG00000008847)	ENSGMOG00000008863	ENSGMOG00000008881	ENSGMOG00000008899	ENSGMOG00000008912	ENSGMOG00000008923
Osteoglossiformes	ANCESTRAL SPECIES	183																ENSGT00530000063497.a.a ##22	ENSGT00940000156662.c.b.b	ENSGT00940000158483	ENSGT00940000153877.a.a.b	ENSGT00390000000134.b.b	ENSGT00530000063711.a.m	ENSGT00940000155874.b	ENSGT00950000183167.a.b.b.a.a	ENSGT00940000156818	ENSGT00530000064873.a	ENSGT00940000158546	ENSGT00950000182953.C.c.h	ENSGT00940000158782.a	ENSGT00940000154856.B.c	ENSGT00530000063672.b	ENSGT00550000074946
P. kingsleyae	MODERN SPECIES	9	ENSPKIG00000015468	ADORA2A (ENSPKIG00000015453)	ENSPKIG00000015432	gucd1 (ENSPKIG00000015411)	ENSPKIG00000015317	p2rx4a (ENSPKIG00000015229)	gstt1b (ENSPKIG00000015176)	ddt (ENSPKIG00000015164)	gstt1b (ENSPKIG00000015144)	chchd10 (ENSPKIG00000015122)	MMP11 (ENSPKIG00000015091)	smarcb1a (ENSPKIG00000015046)	RALGDS (ENSPKIG00000014917)	TBC1D13 (ENSPKIG00000014841)	zer1 (ENSPKIG00000014741)	ODF2 (ENSPKIG00000014678) ##22	sptan1 (ENSPKIG00000014573)	dync2i2 (ENSPKIG00000014526)	setb (ENSPKIG00000014492)	golga7 (ENSPKIG00000014454)	ENSPKIG00000014426
Asian bonytongue	MODERN SPECIES	21	ENSSFOG00015030522	ADORA2A (ENSSFOG00015024329)	gucd1 (ENSSFOG00015028699)	snrpd3l (ENSSFOG00015014180)	ENSSFOG00015014120	ENSSFOG00015029031	p2rx4a (ENSSFOG00015014094)	gstt1b (ENSSFOG00015032362)	ddt (ENSSFOG00015029804)	chchd10 (ENSSFOG00015029189)	MMP11 (ENSSFOG00015014047)	smarcb1b (ENSSFOG00015014012)	RALGDS (ENSSFOG00015029455)	TBC1D13 (ENSSFOG00015013911)	zer1 (ENSSFOG00015013825)	ODF2 (ENSSFOG00015013791) ##22	sptan1 (ENSSFOG00015013653)	dync2i2 (ENSSFOG00015013639)	setb (ENSSFOG00015013596)	golga7 (ENSSFOG00015013558)	ENSSFOG00015013507	loxl2a (ENSSFOG00015013457)	ENSSFOG00015013444	TACC1 (ENSSFOG00015013410)	NSD3 (ENSSFOG00015013215)	ENSSFOG00015013186	ENSSFOG00015013030	ENSSFOG00015030972	ENSSFOG00015013005	rassf2b (ENSSFOG00015032458)	ENSSFOG00015033083
Osteoglossocephalai	ANCESTRAL SPECIES	23	ENSGT00940000161345	ENSGT00940000156340.a.d	ENSGT00940000156340.a.c	ENSGT00530000063156.a.a.b	ENSGT00440000038585.d	ENSGT00440000038585.c	ENSGT00940000153181	ENSGT00940000177481	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00530000063497.a.a ##22	ENSGT00940000156662.d	ENSGT00940000153877.b	ENSGT00940000158483	ENSGT00390000000224	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00940000177919	ENSGT00940000156902.a	ENSGT00940000157207.a.b	ENSGT00450000040324.b	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841	ENSGT01060000248544.b	ENSGT00390000005742	ENSGT00390000004067	ENSGT00390000006287	ENSGT00940000154043.A.j.b	ENSGT00390000008220
Clupeocephala	ANCESTRAL SPECIES	156															ENSGT00390000000224	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00940000177919	ENSGT00940000156902.a	ENSGT00940000157207.a.b	ENSGT00450000040324.b	ENSGT00940000156811.b	ENSGT00390000001098	ENSGT00940000158633.a	ENSGT00940000155841.c.b	ENSGT00390000005742	ENSGT00390000004067	ENSGT00390000006287	ENSGT00940000154043.A.j.b	ENSGT00390000008220	ENSGT01020000230412.A.c.a
Otomorpha	ANCESTRAL SPECIES	61	ENSGT00940000163205.d	ENSGT00940000166931	ENSGT00940000161345	ENSGT00940000156340.a.d	ENSGT01020000230351.D.a.a.b	ENSGT01100000263581	ENSGT00940000163205.c	ENSGT00940000156340.a.c	ENSGT00530000063156.a.a.b	ENSGT00440000038585.c	ENSGT00940000153181	ENSGT00940000177481	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00390000000224	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00940000153877.a.a.a	ENSGT00940000156902.a	ENSGT00940000157207.a.b	ENSGT00450000040324.b	ENSGT00940000156811.a	ENSGT00990000204366	ENSGT00940000155841.c.a	ENSGT00940000163383	ENSGT00950000183101.a.b.b.a.a	ENSGT00940000164360.A	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000153612.B	ENSGT00940000158557.k
Clupeiformes	ANCESTRAL SPECIES	55	ENSGT00390000002096	ENSGT00940000165259.a	ENSGT00970000193642	ENSGT00940000155402.a.b	ENSGT00990000204705	ENSGT00940000156466	ENSGT00390000018651.a	ENSGT00940000163205.c	ENSGT00940000156340.a.c	ENSGT00530000063156.a.a.b	ENSGT00440000038585.c	ENSGT00940000153181	ENSGT00940000158674	ENSGT00530000063187.A	ENSGT00390000000224	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00940000153877.a.a.a	ENSGT00940000156902.a	ENSGT00940000157207.a.b	ENSGT00450000040324.b	ENSGT00940000156811.a	ENSGT00940000155841.c.a	ENSGT00940000163383	ENSGT00950000183101.a.b.b.a.a	ENSGT00940000164360.A	ENSGT00390000001041	ENSGT00940000158897.e.a	ENSGT00940000153612.B	ENSGT00940000158557.k	ENSGT00940000157442
Atlantic herring	MODERN SPECIES	23	rab14l (ENSCHAG00000006942)	gsnb (ENSCHAG00000007205)	ENSCHAG00000013947	ENSCHAG00000013984	cfap77 (ENSCHAG00000014001)	barhl1a (ENSCHAG00000014011)	DDX31 (ENSCHAG00000014057)	ak8 (ENSCHAG00000014183)	spaca9 (ENSCHAG00000014318)	tsc1a (ENSCHAG00000014348)	ENSCHAG00000014365	CEL (ENSCHAG00000014578)	grin1b (ENSCHAG00000014649)	ralgds (ENSCHAG00000014852)	ptgesl (ENSCHAG00000015273)	odf2b (ENSCHAG00000015291) ##22	gle1 (ENSCHAG00000015330)	seta (ENSCHAG00000015839)	zdhhc12a (ENSCHAG00000015883)	ENSCHAG00000015968	ENSCHAG00000015986	EEIG1 (ENSCHAG00000016127)	SH3GLB2 (ENSCHAG00000016391)	ENSCHAG00000016483	ENSCHAG00000016513	SLC16A13 (ENSCHAG00000016669)	lhx2b (ENSCHAG00000016710)	fut9b.4 (ENSCHAG00000016738)	ctu1 (ENSCHAG00000016772)	PXN (ENSCHAG00000016789)	GCN1 (ENSCHAG00000016932)
Denticle herring	MODERN SPECIES	2	asb6 (ENSDCDG00000026981)	si:dkey-91m11.5 (ENSDCDG00000024047)	specc1la (ENSDCDG00000022601)	adora2aa (ENSDCDG00000022536)	upb1 (ENSDCDG00000022522)	gucd1 (ENSDCDG00000022512)	snrpd3 (ENSDCDG00000022506)	p2rx7 (ENSDCDG00000022473)	ENSDCDG00000022452	gstt1a (ENSDCDG00000022446)	MMP11 (ENSDCDG00000022435)	derl3 (ENSDCDG00000022432)	smarcb1a (ENSDCDG00000022363)	ralgds (ENSDCDG00000022351)	ptgesl (ENSDCDG00000022349)	odf2b (ENSDCDG00000022347) ##22	gle1 (ENSDCDG00000022125)	seta (ENSDCDG00000022113)	zdhhc12a (ENSDCDG00000022112)	slc25a25a (ENSDCDG00000021957)	naif1 (ENSDCDG00000021938)	EEIG1 (ENSDCDG00000021932)	ENSDCDG00000021928	sh3glb2a (ENSDCDG00000021710)	ENSDCDG00000021693	ENSDCDG00000021689	lhx2b (ENSDCDG00000021686)	fut9b.4 (ENSDCDG00000021680)	ctu1 (ENSDCDG00000021677)	PXN (ENSDCDG00000021670)	GCN1 (ENSDCDG00000021017)
Otophysi	ANCESTRAL SPECIES	74	ENSGT00610000086153	ENSGT00940000156340.a.d	ENSGT00940000161345	ENSGT00940000166931	ENSGT00940000163205.d	ENSGT01020000230351.D.a.a.a	ENSGT01020000230351.D.a.a.b	ENSGT01100000263581	ENSGT00940000163205.c	ENSGT00940000156340.a.c	ENSGT00530000063156.a.a.b	ENSGT00440000038585.c	ENSGT00940000153181	ENSGT00940000177481	ENSGT00390000000224	ENSGT00530000063497.a.b ##22
Cyprinoidei	ANCESTRAL SPECIES	7	ENSGT01030000234555.a.a.a.c.b.b	ENSGT00390000004906.a.a	ENSGT00390000000571	ENSGT00610000086153	ENSGT00990000213389	ENSGT01020000230351.D.a.a.a.f	ENSGT01020000230351.D.a.a.b	ENSGT01100000263581	ENSGT00940000163205.c	ENSGT00940000156340.a.c	ENSGT00530000063156.a.a.b	ENSGT00440000038585.c	ENSGT00940000153181	ENSGT00940000177481	ENSGT00390000000224	ENSGT00530000063497.a.b ##22	ENSGT00940000154966	ENSGT00390000014879.c.a.a.b	ENSGT00390000003282.A	ENSGT00940000165688	ENSGT00390000016543.c	ENSGT00950000182964.a.b.a.a.a	ENSGT00940000160343	ENSGT00940000165543	ENSGT00940000154668	ENSGT00510000049326.b.b	ENSGT00940000165107.B	ENSGT00390000014416	ENSGT00390000011383	ENSGT00390000009130.b.d.a	ENSGT00940000158747
Cyprininae	ANCESTRAL SPECIES	442							ENSGT01020000230351.D.a.a.a.f.b	ENSGT01020000230351.D.a.a.b.e	ENSGT01100000263581.g	ENSGT00940000163205.c.i	ENSGT00940000156340.a.c.d	ENSGT00530000063156.a.a.b.h	ENSGT00440000038585.c.h.b.a	ENSGT00940000153181.c.b	ENSGT00390000000224.a	ENSGT00530000063497.a.b ##22	ENSGT00940000154966.y	ENSGT00390000014879.c.a.a.b.c	ENSGT00390000003282.A.c	ENSGT00940000165688.g	ENSGT00390000016543.c.b	ENSGT00950000182964.a.b.a.a.a.e	ENSGT00940000159261.c	ENSGT00940000165543.i.a	ENSGT00940000154668.d	ENSGT00510000049326.b.b	ENSGT00940000165107.B.a	ENSGT00390000014416.f	ENSGT00390000011383.n	ENSGT00390000009130.b.d.a.a.a	ENSGT00940000158747.f
Cyprininae_a	DUPLICATION
Cyprininae_a	ANCESTRAL SPECIES	322							ENSGT01020000230351.D.a.a.a.f.b	ENSGT01020000230351.D.a.a.b.e	ENSGT01100000263581.g	ENSGT00940000163205.c.i	ENSGT00940000156340.a.c.d	ENSGT00530000063156.a.a.b.h	ENSGT00440000038585.c.h.b.a	ENSGT00940000153181.c.b	ENSGT00390000000224.a	ENSGT00530000063497.a.b.a ##22	ENSGT00940000154966.y	ENSGT00390000014879.c.a.a.b.c	ENSGT00940000165688.g	ENSGT00390000003282.A.c	ENSGT00530000064359.c.b.h.f	ENSGT00390000016543.c.b	ENSGT00950000182964.a.b.a.a.a.e	ENSGT00940000165543.j	ENSGT00940000154668.d	ENSGT00510000049326.b.b	ENSGT00940000165107.B.a	ENSGT00390000014416.f	ENSGT00390000011383.n	ENSGT00390000009130.b.d.a.a.a	ENSGT00940000158747.f
Common carp reference	MODERN SPECIES	23	foxd5 (ENSCCRG00000021978)	pgm5 (ENSCCRG00000013429)	si:dkey-91m11.5 (ENSCCRG00000007212)	specc1la (ENSCCRG00000056960)	upb1 (ENSCCRG00000006651)	gucd1 (ENSCCRG00000006647)	p2rx4b (ENSCCRG00000064735)	p2rx7 (ENSCCRG00000006627)	tas2r200.2 (ENSCCRG00000000098)	gstt1a (ENSCCRG00000006614)	ENSCCRG00000000164	derl3 (ENSCCRG00000030253)	smarcb1a (ENSCCRG00000030264)	ptgesl (ENSCCRG00000021929)	ralgds (ENSCCRG00000077221)	odf2b (ENSCCRG00000037175) ##22	snrnp200 (ENSCCRG00000036539)	slc20a1a (ENSCCRG00000030186)	syn1 (ENSCCRG00000001878)	vgll4l (ENSCCRG00000037171)	ENSCCRG00000001856	ENSCCRG00000071835	ENSCCRG00000082045	znf131 (ENSCCRG00000037422)	ghra (ENSCCRG00000037332)	FBXO4 (ENSCCRG00000010410)	rimoc1 (ENSCCRG00000060053)	oxct1a (ENSCCRG00000081650)	plcxd3 (ENSCCRG00000003638)	ENSCCRG00000057321	rgs7bpa (ENSCCRG00000040700)
Golden-line barbel	MODERN SPECIES	335	pgm5 (ENSSGRG00000047582)	si:dkey-91m11.5 (ENSSGRG00000047592)	specc1la (ENSSGRG00000047844)	adora2aa (ENSSGRG00000047847)	upb1 (ENSSGRG00000047850)	snrpd3 (ENSSGRG00000047853)	p2rx4b (ENSSGRG00000047867)	p2rx7 (ENSSGRG00000047948)	tas2r200.2 (ENSSGRG00000047949)	gstt1a (ENSSGRG00000047950)	MMP11 (ENSSGRG00000047951)	derl3 (ENSSGRG00000047952)	smarcb1a (ENSSGRG00000047963)	ralgds (ENSSGRG00000048002)	ptgesl (ENSSGRG00000048004)	odf2b (ENSSGRG00000048013) ##22	snrnp200 (ENSSGRG00000048029)	slc20a1a (ENSSGRG00000049170)	vgll4l (ENSSGRG00000049379)	syn1 (ENSSGRG00000049380)	ENSSGRG00000049397	AJM1 (ENSSGRG00000049399)	gadd45ga (ENSSGRG00000049401)	ENSSGRG00000049403	znf131 (ENSSGRG00000049406)	ENSSGRG00000049409	ghra (ENSSGRG00000049411)	FBXO4 (ENSSGRG00000049433)	rimoc1 (ENSSGRG00000049434)	oxct1a (ENSSGRG00000049435)
Cyprininae_a	ANCESTRAL SPECIES	45	ENSGT01030000234555.a.a.a.c.b.b.a	ENSGT00390000004906.a.a.b	ENSGT00390000000571.f	ENSGT00610000086153	ENSGT00990000213389	ENSGT00390000004906.a.a.a	ENSGT00390000000571.e	ENSGT01020000230351.D.a.a.a.f.a	ENSGT01020000230351.D.a.a.b.f	ENSGT00940000163205.c.j	ENSGT00940000156340.a.c.c	ENSGT00530000063156.a.a.b.g.b	ENSGT00440000038585.c.h.b.b	ENSGT00940000153181.c.a	ENSGT00390000000224.b	ENSGT00530000063497.a.b.b ##22	ENSGT00940000154966.z	ENSGT00390000014879.c.a.a.b.d	ENSGT00390000003282.A.d	ENSGT00940000165688.h	ENSGT00390000016543.c.a	ENSGT00950000182964.a.b.a.a.a.f	ENSGT00940000160343	ENSGT00940000165543.i.b	ENSGT00940000154668.c	ENSGT00940000165107.B.b	ENSGT00390000014416.e	ENSGT00390000011383.m	ENSGT00390000009130.b.d.a.a.b	ENSGT00940000158747.e	ENSGT00940000156804.a
Golden-line barbel	MODERN SPECIES	275	ENSSGRG00000044923	si:dkey-91m11.5 (ENSSGRG00000042794)	specc1la (ENSSGRG00000042727)	adora2aa (ENSSGRG00000042719)	upb1 (ENSSGRG00000042697)	gucd1 (ENSSGRG00000042695)	snrpd3 (ENSSGRG00000042682)	p2rx4b (ENSSGRG00000042677)	p2rx7 (ENSSGRG00000042676)	gstt1a (ENSSGRG00000042674)	MMP11 (ENSSGRG00000042668)	derl3 (ENSSGRG00000042666)	smarcb1a (ENSSGRG00000042576)	ralgds (ENSSGRG00000042096)	ptgesl (ENSSGRG00000042087)	odf2b (ENSSGRG00000042084) ##22	snrnp200 (ENSSGRG00000038588)	ENSSGRG00000038573	vgll4l (ENSSGRG00000038572)	syn1 (ENSSGRG00000038083)	AJM1 (ENSSGRG00000038061)	gadd45ga (ENSSGRG00000038058)	creb3l3l (ENSSGRG00000038047)	ENSSGRG00000038041	znf131 (ENSSGRG00000038040)	ghra (ENSSGRG00000037916)	FBXO4 (ENSSGRG00000037915)	rimoc1 (ENSSGRG00000037914)	oxct1a (ENSSGRG00000037912)	plcxd3 (ENSSGRG00000037910)	plcxd3 (ENSSGRG00000037909)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	48	ENSCARG00000008466	BHLHE23 (ENSCARG00000008470)	ythdf1 (ENSCARG00000008476)	nkain5 (ENSCARG00000007456)	si:dkey-70p6.1 (ENSCARG00000007474)	uckl1a (ENSCARG00000007484)	samd10a (ENSCARG00000007519)	ENSCARG00000007540	plp2a (ENSCARG00000007551)	sypa (ENSCARG00000007563)	MMP11 (ENSCARG00000007583)	derl3 (ENSCARG00000007591)	smarcb1a (ENSCARG00000007622)	ralgds (ENSCARG00000007660)	ptgesl (ENSCARG00000007746)	odf2b (ENSCARG00000007770) ##22	slc20a1a (ENSCARG00000007784)	vgll4l (ENSCARG00000007799)	syn1 (ENSCARG00000007812)	AJM1 (ENSCARG00000007865)	gadd45ga (ENSCARG00000007869)	ENSCARG00000007878	ENSCARG00000007895	znf131 (ENSCARG00000007900)	ENSCARG00000007911	ghra (ENSCARG00000007940)	FBXO4 (ENSCARG00000008664)	rimoc1 (ENSCARG00000008669)	oxct1a (ENSCARG00000008710)	plcxd3 (ENSCARG00000008983)	rgs7bpa (ENSCARG00000008992)
Goldfish	MODERN SPECIES	48	NPC1L1 (ENSCARG00000034713)	dusp2 (ENSCARG00000035266)	adra2b (ENSCARG00000035271)	kdm5bb (ENSCARG00000035316)	LMOD1 (ENSCARG00000036195)	ENSCARG00000036256	ENSCARG00000036265	INKA2 (ENSCARG00000036280)	ddx20 (ENSCARG00000036303)	kcnd3 (ENSCARG00000036422)	cttnbp2nlb (ENSCARG00000036462)	capza1b (ENSCARG00000036540)	wnt2bb (ENSCARG00000037964)	mov10b.1 (ENSCARG00000038065)	mov10b.2 (ENSCARG00000039971)	odf2b (ENSCARG00000040809) ##22	slc20a1a (ENSCARG00000040879)	vgll4l (ENSCARG00000040911)	dnase1l1l (ENSCARG00000040968)	kcnq2a (ENSCARG00000041259)	PREX1 (ENSCARG00000041849)	slc16a1b (ENSCARG00000043697)	zmynd12 (ENSCARG00000043722)	rimkla (ENSCARG00000043775)	ENSCARG00000043815	kazna (ENSCARG00000043854)	tmem51a (ENSCARG00000043970)	sema3b (ENSCARG00000044055)	sema3bl (ENSCARG00000045257)	ENSCARG00000045531	ENSCARG00000045542
Zebrafish	MODERN SPECIES	23	specc1la (ENSDARG00000006719)	adora2aa (ENSDARG00000033706)	upb1 (ENSDARG00000011521)	gucd1 (ENSDARG00000068438)	snrpd3 (ENSDARG00000013800)	p2rx4b (ENSDARG00000042452)	p2rx7 (ENSDARG00000042440)	tas2r200.2 (ENSDARG00000074066)	tas2r200.1 (ENSDARG00000079880)	gstt1a (ENSDARG00000042428)	MMP11 (ENSDARG00000026325)	derl3 (ENSDARG00000033871)	smarcb1a (ENSDARG00000033647)	ralgds (ENSDARG00000042409)	ptgesl (ENSDARG00000068415)	odf2b (ENSDARG00000020702) ##22	snrnp200 (ENSDARG00000077536)	slc20a1a (ENSDARG00000020114)	vgll4l (ENSDARG00000068409)	syn1 (ENSDARG00000060368)	AJM1 (ENSDARG00000076873)	ENSDARG00000115950	gadd45ga (ENSDARG00000019417)	creb3l3l (ENSDARG00000020926)	ENSDARG00000074087	znf131 (ENSDARG00000068400)	selenop (ENSDARG00000093549)	ghra (ENSDARG00000054771)	FBXO4 (ENSDARG00000074170)	rimoc1 (ENSDARG00000054777)	oxct1a (ENSDARG00000013063)
Euteleosteomorpha	ANCESTRAL SPECIES	695																ENSGT00530000063497.a.b ##22	ENSGT00940000176203
Protacanthopterygii	ANCESTRAL SPECIES	551																ENSGT00530000063497.a.b ##22	ENSGT00940000176203
Salmoninae	ANCESTRAL SPECIES	54	ENSGT00390000016384.m	ENSGT00940000153772.B.l	ENSGT00550000074961.a.c	ENSGT00940000167067	ENSGT00390000011466.e.a	ENSGT00440000033468.k.a.b	ENSGT00940000154256.ac.c	ENSGT01000000215397.A.a	ENSGT00940000155841.c.a.e	ENSGT00940000158633.b.d	ENSGT00940000156811.a.f	ENSGT00940000159428.f.a.a	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.a.a.b	ENSGT00530000063497.a.b ##22	ENSGT00940000176203	ENSGT00390000000224.i.b	ENSGT00940000177481	ENSGT00940000153181.n.a	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c.b	ENSGT00940000163205.c	ENSGT00940000172267	ENSGT01020000230351.D.a.a.b.c	ENSGT00610000086153.a.a.a	ENSGT00390000000571.i	ENSGT00390000004906.b.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b.d
Salmoninae_a	ANCESTRAL SPECIES	10	ENSGT00390000016384.m	ENSGT00940000153772.B.l	ENSGT00550000074961.a.c	ENSGT00940000167067	ENSGT00390000011466.e.a	ENSGT00440000033468.k.a.b	ENSGT00940000154256.ac.c	ENSGT01000000215397.A.a	ENSGT00940000155841.c.a.e	ENSGT00940000158633.b.d	ENSGT00940000156811.a.f	ENSGT00940000159428.f.a.a	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.a.a.b	ENSGT00530000063497.a.b ##22	ENSGT00940000176203	ENSGT00390000000224.i.b	ENSGT00940000177481	ENSGT00940000153181.n.a	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c.b	ENSGT00940000163205.c	ENSGT00940000172267	ENSGT01020000230351.D.a.a.b.c	ENSGT00610000086153.a.a.a	ENSGT00390000000571.i	ENSGT00390000004906.b.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b.d
Salmo	ANCESTRAL SPECIES		ENSGT00940000157194.a	ENSGT00390000016384.m	ENSGT00940000153772.B.l	ENSGT00550000074961.a.c	ENSGT00940000165424.a.b.b.a	ENSGT00390000011466.e.a	ENSGT01000000215397.A.a	ENSGT00940000155841.c.a.e	ENSGT00940000158633.b.d	ENSGT01060000251815	ENSGT00940000156811.a.f	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.a.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000000224.i.b	ENSGT00940000177481	ENSGT00940000153181.n.a	ENSGT00440000038585.d	ENSGT00940000156340.a.c.b	ENSGT00940000163205.c	ENSGT00940000172267	ENSGT01020000230351.D.a.a.b.c	ENSGT00610000086153.a.a.a	ENSGT00390000000571.i	ENSGT00390000004906.b.b	ENSGT00940000178089	ENSGT00390000015147	ENSGT01030000234555.a.a.a.c.b.b.d	ENSGT00940000153592.B.b.a.a.g
Atlantic salmon	MODERN SPECIES	16	olm2a (ENSSSAG00000072257)	RPL35 (ENSSSAG00000072189)	GOLGA1 (ENSSSAG00000072220)	ENSSSAG00000109298	ENSSSAG00000119018	ENSSSAG00000072196	ENSSSAG00000110621	shlb2 (ENSSSAG00000071861)	ENSSSAG00000071841	ENSSSAG00000071837	ENSSSAG00000071827	ENSSSAG00000071427	zdh12 (ENSSSAG00000071408)	seta (ENSSSAG00000075788)	ENSSSAG00000071267	ENSSSAG00000071218 ##22	ptgesl (ENSSSAG00000085165)	ENSSSAG00000081801	ralgds (ENSSSAG00000069994)	ENSSSAG00000069764	ENSSSAG00000083963	GSTT1 (ENSSSAG00000069741)	ENSSSAG00000069736	p2rx7 (ENSSSAG00000069496)	ENSSSAG00000069482	SMD3 (ENSSSAG00000069477)	gucd1 (ENSSSAG00000069475)	upb1 (ENSSSAG00000069472)	ENSSSAG00000069467	specc1la (ENSSSAG00000069392)	ENSSSAG00000069383
River trout	MODERN SPECIES	19	olfml2a (ENSSTUG00000024972)	RPL35 (ENSSTUG00000024943)	golga1 (ENSSTUG00000024853)	PPP6C (ENSSTUG00000024826)	ENSSTUG00000024818	ENSSTUG00000024806	ENSSTUG00000024794	sh3glb2a (ENSSTUG00000023185)	PIP5KL1 (ENSSTUG00000023107)	ENSSTUG00000023096	EEIG1 (ENSSTUG00000023053)	slc25a25a (ENSSTUG00000022786)	zdhhc12a (ENSSTUG00000022749)	ENSSTUG00000022745	seta (ENSSTUG00000022673)	odf2b (ENSSTUG00000022643) ##22	ptgesl (ENSSTUG00000022605)	ralgds (ENSSTUG00000022259)	SMARCB1 (ENSSTUG00000022133)	MMP11 (ENSSTUG00000022060)	gstt1a (ENSSTUG00000022046)	ENSSTUG00000022030	p2rx7 (ENSSTUG00000021560)	ENSSTUG00000021532	snrpd3 (ENSSTUG00000021524)	gucd1 (ENSSTUG00000021518)	upb1 (ENSSTUG00000021372)	ENSSTUG00000021354	adora2aa (ENSSTUG00000021339)	specc1la (ENSSTUG00000021182)	ENSSTUG00000021164
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000153391.c.b.a.j.a.b	ENSGT00940000157936.k.b	ENSGT00940000157194.a	ENSGT00390000016384.l.b.a	ENSGT00940000153772.B.l	ENSGT00550000074961.a.c	ENSGT00940000167067	ENSGT01000000215397.A.a	ENSGT00940000155841.c.a.e	ENSGT00940000158633.b.d	ENSGT00940000156811.a.f	ENSGT00940000159428.f.a.a	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.a.a.b	ENSGT00530000063497.a.b ##22	ENSGT00940000176203	ENSGT00390000000224.i.b	ENSGT00940000153181.n.a	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c.b	ENSGT00940000163205.c	ENSGT00940000172267	ENSGT01020000230351.D.a.a.b.c	ENSGT00610000086153.a.a.a	ENSGT00390000000571.i	ENSGT00390000004906.b.b	ENSGT00940000178089	ENSGT01030000234555.a.a.a.c.b.b.d	ENSGT00940000153592.B.b.a.a.g
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000157936.k.b	ENSGT00940000157194.a	ENSGT00390000016384.l.b.a	ENSGT00940000153772.B.l	ENSGT00550000074961.a.c	ENSGT00940000167067	ENSGT00390000011466.e.b	ENSGT01000000215397.A.a	ENSGT00940000155841.c.a.e	ENSGT00940000158633.b.d	ENSGT00940000156811.a.f	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.a.a.b	ENSGT00530000063497.a.b ##22	ENSGT00940000176203	ENSGT00390000000224.i.b	ENSGT00940000153181.n.a	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c.b	ENSGT00940000163205.c	ENSGT00940000172267	ENSGT01020000230351.D.a.a.b.c	ENSGT00610000086153.a.a.a	ENSGT00390000000571.i	ENSGT00390000004906.b.b	ENSGT00390000015147	ENSGT01030000234555.a.a.a.c.b.b.d	ENSGT00940000153592.B.b.a.a.g
Coho salmon	MODERN SPECIES	22	nr6a1a (ENSOKIG00005036775)	olfml2a (ENSOKIG00005036964)	RPL35 (ENSOKIG00005036982)	GOLGA1 (ENSOKIG00005037060)	PPP6C (ENSOKIG00005037163)	ENSOKIG00005037188	ENSOKIG00005037199	ENSOKIG00005037206	ENSOKIG00005037258	PIP5KL1 (ENSOKIG00005037443)	EEIG1 (ENSOKIG00005039898)	seta (ENSOKIG00005039985)	ENSOKIG00005040261	zdhhc12a (ENSOKIG00005040812)	ENSOKIG00005040867	odf2b (ENSOKIG00005040889) ##22	ptgesl (ENSOKIG00005040911)	ralgds (ENSOKIG00005040955)	SMARCB1 (ENSOKIG00005041210)	derl3 (ENSOKIG00005041393)	MMP11 (ENSOKIG00005041421)	gstt1a (ENSOKIG00005041450)	ENSOKIG00005041473	p2rx7 (ENSOKIG00005041503)	snrpd3 (ENSOKIG00005041538)	gucd1 (ENSOKIG00005041572)	upb1 (ENSOKIG00005041594)	ENSOKIG00005041660	adora2aa (ENSOKIG00005041671)	specc1la (ENSOKIG00005041731)	si:dkey-91m11.5 (ENSOKIG00005042578)
Chinook salmon	MODERN SPECIES	28	nr6a1a (ENSOTSG00005006904)	olfml2a (ENSOTSG00005006919)	RPL35 (ENSOTSG00005006923)	golga1 (ENSOTSG00005006928)	PPP6C (ENSOTSG00005006980)	ENSOTSG00005006992	prim1 (ENSOTSG00005006993)	ENSOTSG00005007000	sh3glb2a (ENSOTSG00005007010)	PIP5KL1 (ENSOTSG00005007423)	EEIG1 (ENSOTSG00005007426)	slc25a25a (ENSOTSG00005007433)	zdhhc12a (ENSOTSG00005007453)	ENSOTSG00005007455	seta (ENSOTSG00005007458)	odf2b (ENSOTSG00005007465) ##22	ENSOTSG00005007468	ptgesl (ENSOTSG00005007471)	ralgds (ENSOTSG00005007484)	SMARCB1 (ENSOTSG00005007488)	derl3 (ENSOTSG00005007491)	MMP11 (ENSOTSG00005007492)	gstt1a (ENSOTSG00005007493)	ENSOTSG00005007495	p2rx7 (ENSOTSG00005007499)	snrpd3 (ENSOTSG00005007501)	gucd1 (ENSOTSG00005007502)	ENSOTSG00005007505	ENSOTSG00005007506	adora2aa (ENSOTSG00005007507)	specc1la (ENSOTSG00005007512)
Rainbow trout	MODERN SPECIES	27	NR5A1 (ENSOMYG00000045698)	nr6a1a (ENSOMYG00000045717)	OLFML2A (ENSOMYG00000045784)	RPL35 (ENSOMYG00000045792)	GOLGA1 (ENSOMYG00000045811)	ENSOMYG00000045867	ENSOMYG00000045876	ENSOMYG00000045895	ENSOMYG00000045923	ENSOMYG00000046043	ENSOMYG00000046048	ENSOMYG00000046069	ENSOMYG00000046099	ENSOMYG00000011782	seta (ENSOMYG00000011815)	ENSOMYG00000011887 ##22	ENSOMYG00000050648	ptgesl (ENSOMYG00000011908)	ralgds (ENSOMYG00000012005)	ENSOMYG00000012107	derl3 (ENSOMYG00000012189)	ENSOMYG00000012221	gstt1a (ENSOMYG00000012228)	tas2r200.1 (ENSOMYG00000012237)	p2rx7 (ENSOMYG00000012263)	snrpd3 (ENSOMYG00000012386)	gucd1 (ENSOMYG00000012400)	upb1 (ENSOMYG00000012421)	ENSOMYG00000012566	adora2aa (ENSOMYG00000012575)	ENSOMYG00000069322
Huchen	MODERN SPECIES	26	nr6a1a (ENSHHUG00000028953)	olfml2a (ENSHHUG00000028945)	RPL35 (ENSHHUG00000028782)	golga1 (ENSHHUG00000028765)	PPP6C (ENSHHUG00000028754)	prim1 (ENSHHUG00000028739)	ENSHHUG00000028725	ENSHHUG00000028704	sh3glb2a (ENSHHUG00000028391)	PIP5KL1 (ENSHHUG00000028376)	EEIG1 (ENSHHUG00000028363)	ENSHHUG00000028266	zdhhc12a (ENSHHUG00000028263)	ENSHHUG00000028205	seta (ENSHHUG00000028145)	odf2b (ENSHHUG00000028116) ##22	ptgesl (ENSHHUG00000028092)	ralgds (ENSHHUG00000028064)	SMARCB1 (ENSHHUG00000027858)	derl3 (ENSHHUG00000027842)	MMP11 (ENSHHUG00000027835)	gstt1a (ENSHHUG00000027834)	ENSHHUG00000027832	p2rx7 (ENSHHUG00000027795)	snrpd3 (ENSHHUG00000027787)	gucd1 (ENSHHUG00000027775)	upb1 (ENSHHUG00000027774)	adora2aa (ENSHHUG00000027773)	specc1la (ENSHHUG00000027752)	ENSHHUG00000027746	si:dkey-91m11.5 (ENSHHUG00000027654)
Acanthomorphata	ANCESTRAL SPECIES	711																ENSGT00530000063497.a.b ##22	ENSGT00940000176203
Euacanthomorphacea	ANCESTRAL SPECIES	42	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000167684	ENSGT00730000111240	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00770000121806	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000167684	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b	ENSGT00390000004247
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01100000264138	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000159428.f	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b	ENSGT00950000182888.a.b	ENSGT00390000004247
Aplocheiloidei	ANCESTRAL SPECIES	66	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01100000264138	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT00400000024875.c.a.a.a
Mangrove rivulus	MODERN SPECIES	105						ENSKMAG00000004244	mrpl1 (ENSKMAG00000004236)	cnot6l (ENSKMAG00000004165)	ENSKMAG00000004133	EEIG1 (ENSKMAG00000004078)	slc25a25a (ENSKMAG00000004035)	zdhhc12a (ENSKMAG00000004017)	ENSKMAG00000003935	SET (ENSKMAG00000003924)	si:ch211-51h9.7 (ENSKMAG00000003902)	odf2b (ENSKMAG00000003891) ##22	gle1 (ENSKMAG00000003876)	ptgesl (ENSKMAG00000003847)	ralgds (ENSKMAG00000003729)	SMARCB1 (ENSKMAG00000003650)	derl3 (ENSKMAG00000003603)	ENSKMAG00000003583	gstt1a (ENSKMAG00000003548)	p2rx7 (ENSKMAG00000003524)	GPR21 (ENSKMAG00000003502)	ENSKMAG00000003479	ENSKMAG00000003464	ENSKMAG00000003460	ENSKMAG00000003447	ENSKMAG00000003434	sh2d3cb (ENSKMAG00000003306)
Turquoise killifish	MODERN SPECIES	1620	fgf5 (ENSNFUG00015017967)	ENSNFUG00015017964	cfap299 (ENSNFUG00015017962)	bmp3 (ENSNFUG00015017961)	PRKG2 (ENSNFUG00015017919)	rasgef1ba (ENSNFUG00015017781)	ENSNFUG00015017276	ENSNFUG00015017204	CCL-C5A (ENSNFUG00015017198)	RUSC2 (ENSNFUG00015017183)	ENSNFUG00015017172	ENSNFUG00015014321	sec14l8 (ENSNFUG00015013967)	RNF215 (ENSNFUG00015013951)	ASCC2 (ENSNFUG00015013935)	ENSNFUG00015013927 ##22	GLE1 (ENSNFUG00015013870)	ptgesl (ENSNFUG00015013847)	ENSNFUG00015013840	ralgds (ENSNFUG00015013702)	SMARCB1 (ENSNFUG00015013654)	MMP11 (ENSNFUG00015013546)	gstt1a (ENSNFUG00015013505)	p2rx7 (ENSNFUG00015013385)	ENSNFUG00015013362	PPIL2 (ENSNFUG00015012545)	stambpb (ENSNFUG00015012485)	SLC39A14 (ENSNFUG00015012480)	slc4a4a (ENSNFUG00015009614)	NPFFR2.1 (ENSNFUG00015009382)	adamts3 (ENSNFUG00015007581)
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000154742.b	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01100000264138	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00970000193390.c.a.b.x	ENSGT01030000234583.a.a.c.b.a.b.c.b	ENSGT00970000193390.c.a.b.w.a.e.a	ENSGT00940000165787.a.b.o
NAME_4	ANCESTRAL SPECIES	128	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01100000264138	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00530000065225	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481
Sheepshead minnow	MODERN SPECIES	201	antxr2a (ENSCVAG00000021330)	paqr3a (ENSCVAG00000021390)	bmp2k (ENSCVAG00000021452)	anxa3a (ENSCVAG00000021463)	fras1 (ENSCVAG00000021626)	mrpl1 (ENSCVAG00000021636)	cnot6l (ENSCVAG00000021683)	ENSCVAG00000021689	EEIG1 (ENSCVAG00000021746)	ENSCVAG00000021767	ENSCVAG00000021796	zdhhc12a (ENSCVAG00000021800)	ENSCVAG00000021813	si:ch211-51h9.7 (ENSCVAG00000000776)	SET (ENSCVAG00000021845)	odf2b (ENSCVAG00000021855) ##22	gle1 (ENSCVAG00000021883)	ptgesl (ENSCVAG00000021891)
Mummichog	MODERN SPECIES	2221	prdm8b (ENSFHEG00000012656)	antxr2a (ENSFHEG00000012645)	paqr3a (ENSFHEG00000012622)	bmp2k (ENSFHEG00000012592)	anxa3a (ENSFHEG00000012543)	fras1 (ENSFHEG00000012531)	mrpl1 (ENSFHEG00000012375)	cnot6l (ENSFHEG00000012364)	ENSFHEG00000012333	ENSFHEG00000000776	EEIG1 (ENSFHEG00000012288)	slc25a25a (ENSFHEG00000012188)	zdhhc12a (ENSFHEG00000012156)	ENSFHEG00000012136	SET (ENSFHEG00000012102)	odf2b (ENSFHEG00000012030) ##22	ENSFHEG00000012011	ptgesl (ENSFHEG00000012004)	ENSFHEG00000011983	ENSFHEG00000011976
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00940000157548	ENSGT00940000154742.b	ENSGT00940000162660.b.a.h.a	ENSGT01030000234583.a.a.c.b.a.a.b.a.b.b	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01100000264138	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00970000193390.c.a.b.w.a.e.b.a.b	ENSGT00970000193390.c.a.b.w.b	ENSGT00950000182924.A.b.b	ENSGT00940000158973.a.a	ENSGT00970000193390.c.a.b.w.a.e.b.a.a.b	ENSGT00940000165623	ENSGT00730000110943.B.d.a	ENSGT00940000158390	ENSGT00390000001654
Poecilia	ANCESTRAL SPECIES	35	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000162660.b.a.h.a	ENSGT01030000234583.a.a.c.b.a.a.b.a.b.b	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01100000264138	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00970000193390.c.a.b.w.a.e.b.a.a.a.b	ENSGT00940000177176.h.a
NAME_6	ANCESTRAL SPECIES	95	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000162660.b.a.h.a	ENSGT01030000234583.a.a.c.b.a.a.b.a.b.b	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01100000264138	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00970000193390.c.a.b.w.a.e.b.a.a.a.b	ENSGT00970000193390.c.a.b.x
Amazon molly	MODERN SPECIES	272	antxr2a (ENSPFOG00000011750)	paqr3a (ENSPFOG00000012169)	bmp2k (ENSPFOG00000012197)	ENSPFOG00000012248	ENSPFOG00000020659	anxa3a (ENSPFOG00000012259)	fras1 (ENSPFOG00000012315)	mrpl1 (ENSPFOG00000013095)	cnot6l (ENSPFOG00000013163)	EEIG1 (ENSPFOG00000013232)	ENSPFOG00000013351	zdhhc12a (ENSPFOG00000013419)	ENSPFOG00000013424	SET (ENSPFOG00000013616)	si:ch211-51h9.7 (ENSPFOG00000013648)	odf2b (ENSPFOG00000013650) ##22	gle1 (ENSPFOG00000013740)	ptgesl (ENSPFOG00000013850)	ralgds (ENSPFOG00000013910)	SMARCB1 (ENSPFOG00000013980)	derl3 (ENSPFOG00000014017)	ENSPFOG00000014023	ENSPFOG00000020660	ENSPFOG00000023360	ENSPFOG00000014062	ENSPFOG00000022783	ENSPFOG00000020661	ENSPFOG00000014075	camk2b1 (ENSPFOG00000014140)	ENSPFOG00000014272	ENSPFOG00000022105
Sailfin molly	MODERN SPECIES	772												ENSPLAG00000023937	zdhhc12a (ENSPLAG00000023939)	ENSPLAG00000023940	SET (ENSPLAG00000023941)	odf2b (ENSPLAG00000023943) ##22	gle1 (ENSPLAG00000023944)	ptgesl (ENSPLAG00000023946)	ralgds (ENSPLAG00000023948)	SMARCB1 (ENSPLAG00000023951)	derl3 (ENSPLAG00000023953)	ENSPLAG00000023914	ENSPLAG00000023909	ENSPLAG00000023883	ENSPLAG00000023859	ENSPLAG00000023852	ENSPLAG00000023840	ENSPLAG00000023792	ENSPLAG00000000684
Guppy	MODERN SPECIES	461	prdm8b (ENSPREG00000003150)	antxr2a (ENSPREG00000003163)	paqr3a (ENSPREG00000003191)	bmp2k (ENSPREG00000003209)	ENSPREG00000003268	anxa3a (ENSPREG00000003441)	ENSPREG00000003502	mrpl1 (ENSPREG00000003524)	cnot6l (ENSPREG00000003561)	ENSPREG00000003597	EEIG1 (ENSPREG00000003697)	ENSPREG00000003726	ZDHHC12 (ENSPREG00000003761)	ENSPREG00000003772	SET (ENSPREG00000003819)	odf2b (ENSPREG00000003839) ##22	gle1 (ENSPREG00000003860)	ptgesl (ENSPREG00000003883)	ralgds (ENSPREG00000003910)	SMARCB1 (ENSPREG00000003939)	derl3 (ENSPREG00000003970)	ENSPREG00000004015	ENSPREG00000004057	ENSPREG00000004070	ENSPREG00000004082	ENSPREG00000004096	ENSPREG00000004127	ENSPREG00000004140	ENSPREG00000004152	ENSPREG00000004172	ENSPREG00000004183
Platyfish	MODERN SPECIES	3	bmp2k (ENSXMAG00000009913)	ENSXMAG00000022853	ENSXMAG00000009911	ENSXMAG00000020871	anxa3a (ENSXMAG00000002973)	fras1 (ENSXMAG00000002929)	mrpl1 (ENSXMAG00000002920)	cnot6l (ENSXMAG00000002900)	ENSXMAG00000024753	EEIG1 (ENSXMAG00000002891)	ENSXMAG00000002883	zdhhc12a (ENSXMAG00000002879)	ENSXMAG00000002866	SET (ENSXMAG00000002845)	si:ch211-51h9.7 (ENSXMAG00000021072)	odf2b (ENSXMAG00000002830) ##22	gle1 (ENSXMAG00000002812)	ptgesl (ENSXMAG00000028160)	ralgds (ENSXMAG00000002762)	SMARCB1 (ENSXMAG00000002738)	derl3 (ENSXMAG00000028818)	MMP11 (ENSXMAG00000027519)	ENSXMAG00000025844	ENSXMAG00000027259	ENSXMAG00000002692	camk2b1 (ENSXMAG00000002689)	ENSXMAG00000021819	si:dkey-174n20.1 (ENSXMAG00000002684)	SUSD2 (ENSXMAG00000002682)	kremen1 (ENSXMAG00000002678)	coq5 (ENSXMAG00000002674)
Oryzias	ANCESTRAL SPECIES	57							ENSGT00940000153181	ENSGT00390000000224	ENSGT00390000012903	ENSGT00440000038585.d	ENSGT00940000156340.a.c	ENSGT00940000163205.c	ENSGT00950000182888.a.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b	ENSGT00530000063497.a.b ##22	ENSGT01000000214675	ENSGT00940000157298	ENSGT00940000162168	ENSGT00940000163761	ENSGT00940000159174.f	ENSGT00940000154742.b	ENSGT00940000157548	ENSGT00940000155291.a	ENSGT00940000156320.c	ENSGT00890000139463.b.b.b	ENSGT00940000158449	ENSGT00940000159775	ENSGT00940000159393	ENSGT00940000155816.b	ENSGT00980000198897
Oryzias_b	ANCESTRAL SPECIES	56							ENSGT00940000153181	ENSGT00390000000224	ENSGT00390000012903	ENSGT00440000038585.d	ENSGT00940000156340.a.c	ENSGT00940000163205.c	ENSGT00950000182888.a.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b	ENSGT00530000063497.a.b ##22	ENSGT01000000214675	ENSGT00940000157298	ENSGT00940000162168	ENSGT00940000157548	ENSGT00940000155291.a	ENSGT00940000156320.c	ENSGT00890000139463.b.b.b	ENSGT00940000158449	ENSGT00940000159775	ENSGT00940000159393	ENSGT00940000155816.b	ENSGT00980000198897	ENSGT00530000065225	ENSGT00940000153877.a.b	ENSGT00940000177919
Javanese ricefish	MODERN SPECIES	23	endog (ENSOJAG00000016954)	ENSOJAG00000017020	ENSOJAG00000017030	ENSOJAG00000017044	FKBP15 (ENSOJAG00000017072)	ENSOJAG00000017225	ralgds (ENSOJAG00000017274)	ptgesl (ENSOJAG00000017416)	gle1 (ENSOJAG00000017430)	SMARCB1 (ENSOJAG00000017471)	ENSOJAG00000017564	gstt1a (ENSOJAG00000017574)	tor2a (ENSOJAG00000017582)	SH2D3C (ENSOJAG00000017583)	ENSOJAG00000017589	ENSOJAG00000017601 ##22	ENSOJAG00000017622	cnot6l (ENSOJAG00000017630)	mrpl1 (ENSOJAG00000017674)	anxa3a (ENSOJAG00000019068)	ENSOJAG00000019112	bmp2k (ENSOJAG00000019124)	paqr3a (ENSOJAG00000019225)	ENSOJAG00000019252	ENSOJAG00000019269	ENSOJAG00000019288	WHRN (ENSOJAG00000019289)	stxbp1b (ENSOJAG00000019404)	ENSOJAG00000020671	FUT7 (ENSOJAG00000020696)	niban2b (ENSOJAG00000020765)
Oryzias_a	ANCESTRAL SPECIES	75							ENSGT00940000153181	ENSGT00390000000224	ENSGT00940000176203	ENSGT00440000038585.d	ENSGT00940000156340.a.c	ENSGT00940000163205.c	ENSGT00950000182888.a.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b	ENSGT00530000063497.a.b ##22	ENSGT01000000214675	ENSGT00940000157298	ENSGT00940000162168	ENSGT00940000163761	ENSGT00940000154742.b	ENSGT00940000157548	ENSGT00940000155291.a	ENSGT00940000156320.c	ENSGT00890000139463.b.b.b	ENSGT00940000158449	ENSGT01050000245948	ENSGT00940000159775	ENSGT00940000159393	ENSGT00940000155816.b	ENSGT00980000198897
Japanese Medaka HdrR	MODERN SPECIES	23							ralgds (ENSORLG00000020651)	ptgesl (ENSORLG00000020654)	ENSORLG00000020655	SMARCB1 (ENSORLG00000026466)	ENSORLG00000018894	gstt1a (ENSORLG00000018586)	tor2a (ENSORLG00000020659)	ENSORLG00000023470	ENSORLG00000020660	ENSORLG00000026024 ##22	ENSORLG00000024363	ENSORLG00000029185	cnot6l (ENSORLG00000018874)	ENSORLG00000024950	mrpl1 (ENSORLG00000018859)	ENSORLG00000030227	ENSORLG00000026119	ENSORLG00000028901	anxa3a (ENSORLG00000025572)	ENSORLG00000030530	bmp2k (ENSORLG00000017807)	paqr3a (ENSORLG00000017797)	ENSORLG00000029742	ENSORLG00000025154	antxr2a (ENSORLG00000017791)
Ovalentaria_B	ANCESTRAL SPECIES	27	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Pomacentridae	ANCESTRAL SPECIES	26	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b	ENSGT00950000182888.a.b	ENSGT00390000004247
Pomacentridae_A	ANCESTRAL SPECIES	34	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b	ENSGT00950000182888.a.b	ENSGT00390000004247
Amphiprion	ANCESTRAL SPECIES	40	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675.e	ENSGT01000000214675.f	ENSGT00940000156811.a	ENSGT00940000168284.b	ENSGT00940000159428.f	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b.i.a	ENSGT00940000165787.a.b.j.a	ENSGT00940000165787.a.b.i.b
Orange clownfish	MODERN SPECIES	19	antxr2a (ENSAPEG00000019728)	paqr3a (ENSAPEG00000019761)	bmp2k (ENSAPEG00000019803)	fras1 (ENSAPEG00000019848)	mrpl1 (ENSAPEG00000020020)	cnot6l (ENSAPEG00000020035)	ENSAPEG00000020064	ENSAPEG00000020079	EEIG1 (ENSAPEG00000020095)	ENSAPEG00000020147	ENSAPEG00000020157	zdhhc12a (ENSAPEG00000020199)	ENSAPEG00000020213	SET (ENSAPEG00000020267)	si:ch211-51h9.7 (ENSAPEG00000020302)	ENSAPEG00000020315 ##22	gle1 (ENSAPEG00000020337)	ptgesl (ENSAPEG00000020358)	ralgds (ENSAPEG00000020402)	SMARCB1 (ENSAPEG00000020460)	derl3 (ENSAPEG00000020496)	MMP11 (ENSAPEG00000020570)	ENSAPEG00000020589	gstt1a (ENSAPEG00000020596)	p2rx7 (ENSAPEG00000020631)	ENSAPEG00000020764	GPR21 (ENSAPEG00000020788)	ENSAPEG00000020801	sh2d3cb (ENSAPEG00000020909)	ENSAPEG00000020942	ENSAPEG00000020956
Spiny chromis	MODERN SPECIES	2292																odf2b (ENSAPOG00000020100) ##22	gle1 (ENSAPOG00000020086)	ptgesl (ENSAPOG00000020071)	ENSAPOG00000020028
Bicolor damselfish	MODERN SPECIES	1684									ENSSPAG00000010422	EEIG1 (ENSSPAG00000010391)	ENSSPAG00000010346	ZDHHC12 (ENSSPAG00000010335)	ENSSPAG00000010331	SET (ENSSPAG00000010308)	si:ch211-51h9.7 (ENSSPAG00000010295)	odf2b (ENSSPAG00000010276) ##22	gle1 (ENSSPAG00000010259)	ptgesl (ENSSPAG00000010243)
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00980000203258	ENSGT00940000162168	ENSGT00940000163761	ENSGT00940000159174.f	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c.h	ENSGT00940000163205.c.g	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000154742.b	ENSGT00940000162168	ENSGT00940000163761	ENSGT00940000159174.f	ENSGT00940000157298	ENSGT01000000214675.b	ENSGT01000000214675.a	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c.h	ENSGT00940000163205.c.g	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000154742.b	ENSGT00940000162168	ENSGT00940000163761	ENSGT00940000159174.f	ENSGT00940000157298	ENSGT01000000214675.b	ENSGT01000000214675.a	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c.h	ENSGT00940000163205.c.g	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Haplochromini	ANCESTRAL SPECIES	4	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000154742.b	ENSGT00940000162168	ENSGT00940000163761	ENSGT00940000159174.f	ENSGT00940000157298	ENSGT01000000214675.b	ENSGT01000000214675.a	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c.h	ENSGT00940000163205.c.g	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b.g.a	ENSGT00940000165787.a.b.g.b	ENSGT00940000154130.a.b.f
Burton s mouthbrooder	MODERN SPECIES	920										EEIG1 (ENSHBUG00000011044)	slc25a25a (ENSHBUG00000010942)	zdhhc12a (ENSHBUG00000010888)	ENSHBUG00000010880	SET (ENSHBUG00000010839)	si:ch211-51h9.7 (ENSHBUG00000010818)	odf2b (ENSHBUG00000010813) ##22	gle1 (ENSHBUG00000010794)	ptgesl (ENSHBUG00000010774)	ralgds (ENSHBUG00000010721)	SMARCB1 (ENSHBUG00000010668)	derl3 (ENSHBUG00000010631)	ENSHBUG00000010604	gstt1a (ENSHBUG00000010588)
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000154742.b	ENSGT00940000162168	ENSGT00940000163761	ENSGT00940000159174.f	ENSGT00940000157298	ENSGT01000000214675.b	ENSGT01000000214675.a	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c.h	ENSGT00940000163205.c.g	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b.g.a	ENSGT00940000165787.a.b.g.b	ENSGT00940000154130.a.b.f
Haplochromini_B	ANCESTRAL SPECIES	2	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000154742.b	ENSGT00940000162168	ENSGT00940000163761	ENSGT00940000159174.f	ENSGT00940000157298	ENSGT01000000214675.b.c	ENSGT01000000214675.a	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000177481	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c.h	ENSGT00940000163205.c.g	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b.g.a	ENSGT00940000165787.a.b.h	ENSGT00940000165787.a.b.g.b
Zebra mbuna	MODERN SPECIES	1094	mrpl1 (ENSMZEG00005020288)	fras1 (ENSMZEG00005020260)	anxa3a (ENSMZEG00005020243)	cnot6l (ENSMZEG00005020235)	ENSMZEG00005020229	ENSMZEG00005020226	ENSMZEG00005020224	EEIG1 (ENSMZEG00005020220)	ENSMZEG00005020218	ENSMZEG00005020216	slc25a25a (ENSMZEG00005020213)	zdhhc12a (ENSMZEG00005020210)	ENSMZEG00005020205	si:ch211-51h9.7 (ENSMZEG00005020203)	SET (ENSMZEG00005020199)	odf2b (ENSMZEG00005020190) ##22	gle1 (ENSMZEG00005020182)	ptgesl (ENSMZEG00005020177)	ralgds (ENSMZEG00005020129)	SMARCB1 (ENSMZEG00005020105)	derl3 (ENSMZEG00005020099)	MMP11 (ENSMZEG00005020095)	gstt1a (ENSMZEG00005020082)	gstt1a (ENSMZEG00005020077)	p2rx7 (ENSMZEG00005020072)	GPR21 (ENSMZEG00005020069)	ENSMZEG00005020033	ENSMZEG00005020022	ENSMZEG00005020020	ENSMZEG00005020017	sh2d3cb (ENSMZEG00005020011)
Eastern happy	MODERN SPECIES	3	bmp2k (ENSACLG00000001497)	ENSACLG00000001486	mrpl1 (ENSACLG00000001464)	fras1 (ENSACLG00000000997)	anxa3a (ENSACLG00000000913)	cnot6l (ENSACLG00000000879)	ENSACLG00000000864	ENSACLG00000000848	ENSACLG00000000842	EEIG1 (ENSACLG00000000773)	slc25a25a (ENSACLG00000000744)	zdhhc12a (ENSACLG00000000722)	ENSACLG00000000701	SET (ENSACLG00000000683)	si:ch211-51h9.7 (ENSACLG00000000679)	odf2b (ENSACLG00000000651) ##22	gle1 (ENSACLG00000000598)	ptgesl (ENSACLG00000000568)	ENSACLG00000000560	ralgds (ENSACLG00000000484)	SMARCB1 (ENSACLG00000000461)	derl3 (ENSACLG00000000439)	MMP11 (ENSACLG00000000434)	gstt1a (ENSACLG00000000172)	gstt1a (ENSACLG00000000157)	ENSACLG00000000147	p2rx7 (ENSACLG00000025679)	GPR21 (ENSACLG00000025672)	ENSACLG00000025639	ENSACLG00000025560	ENSACLG00000025547
Nile tilapia	MODERN SPECIES	3	bmp2k (ENSONIG00000014028)	ENSONIG00000036787	mrpl1 (ENSONIG00000014024)	ENSONIG00000041641	anxa3a (ENSONIG00000014003)	cnot6l (ENSONIG00000013992)	ENSONIG00000040434	ENSONIG00000029845	ENSONIG00000013990	ENSONIG00000036109	EEIG1 (ENSONIG00000013986)	slc25a25a (ENSONIG00000013984)	zdhhc12a (ENSONIG00000013983)	ENSONIG00000013980	SET (ENSONIG00000013978)	odf2b (ENSONIG00000013972) ##22	gle1 (ENSONIG00000013967)	ptgesl (ENSONIG00000013962)	ralgds (ENSONIG00000013950)	SMARCB1 (ENSONIG00000039190)	derl3 (ENSONIG00000013946)	MMP11 (ENSONIG00000013943)	ENSONIG00000034608	p2rx7 (ENSONIG00000013930)	GPR21 (ENSONIG00000020395)	ENSONIG00000032334	ENSONIG00000013919	ENSONIG00000030092	ENSONIG00000040289	sh2d3cb (ENSONIG00000013914)	tor2a (ENSONIG00000013913)
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Tetraodontidae	ANCESTRAL SPECIES	75	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548.e	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d
Fugu	MODERN SPECIES	13	bmp3 (ENSTRUG00000022136)	cfap299 (ENSTRUG00000024534)	fgf5 (ENSTRUG00000000972)	prdm8b (ENSTRUG00000001003)	antxr2a (ENSTRUG00000001021)	paqr3a (ENSTRUG00000001442)	bmp2k (ENSTRUG00000001574)	mrpl1 (ENSTRUG00000004229)	cnot6l (ENSTRUG00000004332)	cxcl13 (ENSTRUG00000025714)	EEIG1 (ENSTRUG00000004766)	ENSTRUG00000005098	zdhhc12a (ENSTRUG00000023407)	ENSTRUG00000028789	SET (ENSTRUG00000006019)	odf2b (ENSTRUG00000006261) ##22	gle1 (ENSTRUG00000006713)	ptgesl (ENSTRUG00000006963)	ralgds (ENSTRUG00000007032)	SMARCB1 (ENSTRUG00000007532)	ENSTRUG00000007730	ENSTRUG00000008343	ENSTRUG00000023569	ENSTRUG00000008384	GPR21 (ENSTRUG00000008775)	p2rx7 (ENSTRUG00000008820)	gstt1a (ENSTRUG00000009188)	tas2r1 (ENSTRUG00000009338)	MMP11 (ENSTRUG00000009346)	tor2a (ENSTRUG00000009608)	PTRH1 (ENSTRUG00000019801)
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT01100000263581	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b	ENSGT00390000004247
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	9	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT00400000024875.c.b
European seabass	MODERN SPECIES	13	fgf5 (ENSDLAG00005027058)	prdm8b (ENSDLAG00005009423)	antxr2a (ENSDLAG00005009431)	paqr3a (ENSDLAG00005009524)	bmp2k (ENSDLAG00005009534)	anxa3a (ENSDLAG00005009598)	fras1 (ENSDLAG00005009656)	mrpl1 (ENSDLAG00005010312)	cnot6l (ENSDLAG00005010354)	ENSDLAG00005010439	ENSDLAG00005010455	ENSDLAG00005010492	ENSDLAG00005033111	zdhhc12a (ENSDLAG00005010586)	ENSDLAG00005030645	ENSDLAG00005032978 ##22	ENSDLAG00005011064	ptgesl (ENSDLAG00005029853)	ralgds (ENSDLAG00005011426)	ENSDLAG00005011669	derl3 (ENSDLAG00005011739)	ENSDLAG00005011760	p2rx7 (ENSDLAG00005011780)	ENSDLAG00005011864	ENSDLAG00005011865	sh2d3cb (ENSDLAG00005011880)	ENSDLAG00005028310	tor2a (ENSDLAG00005011900)	ptrh1 (ENSDLAG00005033293)	ENSDLAG00005011921	ENSDLAG00005011928
Large yellow croaker	MODERN SPECIES	2	fgf5 (ENSLCRG00005020520)	prdm8b (ENSLCRG00005020519)	antxr2a (ENSLCRG00005020514)	paqr3a (ENSLCRG00005020512)	bmp2k (ENSLCRG00005020510)	anxa3a (ENSLCRG00005020507)	fras1 (ENSLCRG00005019992)	mrpl1 (ENSLCRG00005019980)	cnot6l (ENSLCRG00005019972)	cxcl13 (ENSLCRG00005019970)	EEIG1 (ENSLCRG00005019969)	slc25a25a (ENSLCRG00005019910)	zdhhc12a (ENSLCRG00005019907)	ENSLCRG00005019905	SET (ENSLCRG00005019898)	odf2b (ENSLCRG00005019897) ##22	gle1 (ENSLCRG00005019695)	ptgesl (ENSLCRG00005019686)	ralgds (ENSLCRG00005019654)	SMARCB1 (ENSLCRG00005019630)	derl3 (ENSLCRG00005019626)	MMP11 (ENSLCRG00005019625)	gstt1a (ENSLCRG00005019623)	p2rx7 (ENSLCRG00005019621)	GPR21 (ENSLCRG00005019618)	ENSLCRG00005019611	ENSLCRG00005019605	sh2d3cb (ENSLCRG00005019600)	tor2a (ENSLCRG00005019595)	ptrh1 (ENSLCRG00005019591)	ENSLCRG00005019588
Gilthead seabream	MODERN SPECIES	19	prdm8b (ENSSAUG00010021106)	antxr2a (ENSSAUG00010021102)	paqr3a (ENSSAUG00010021097)	bmp2k (ENSSAUG00010021094)	anxa3a (ENSSAUG00010021091)	fras1 (ENSSAUG00010020316)	mrpl1 (ENSSAUG00010020244)	cnot6l (ENSSAUG00010020241)	ENSSAUG00010020238	EEIG1 (ENSSAUG00010020236)	slc25a25a (ENSSAUG00010019609)	zdhhc12a (ENSSAUG00010019602)	ENSSAUG00010019598	ENSSAUG00010019594	SET (ENSSAUG00010019589)	odf2b (ENSSAUG00010019584) ##22	gle1 (ENSSAUG00010019564)	ptgesl (ENSSAUG00010019561)	ralgds (ENSSAUG00010019526)	SMARCB1 (ENSSAUG00010019512)	derl3 (ENSSAUG00010019506)	MMP11 (ENSSAUG00010019504)	tas2r200.1 (ENSSAUG00010019503)	gstt1a (ENSSAUG00010019502)	p2rx7 (ENSSAUG00010019500)	GPR21 (ENSSAUG00010019499)	ENSSAUG00010019496	ugt5a1 (ENSSAUG00010019492)	sh2d3cb (ENSSAUG00010019491)	tor2a (ENSSAUG00010019489)	ptrh1 (ENSSAUG00010019487)
Perciformes	ANCESTRAL SPECIES	6	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Channel bull blenny	MODERN SPECIES	23	ENSCGOG00000011025	HIRA (ENSCGOG00000010392)	slc2a8 (ENSCGOG00000010362)	mymk (ENSCGOG00000010358)	ADAMTSL2 (ENSCGOG00000010306)	FAM163B (ENSCGOG00000010304)	ENSCGOG00000010303	ENSCGOG00000010300	ENSCGOG00000010297	EEIG1 (ENSCGOG00000010265)	slc25a25a (ENSCGOG00000009767)	zdhhc12a (ENSCGOG00000009735)	ENSCGOG00000009702	ENSCGOG00000009699	SET (ENSCGOG00000009535)	odf2b (ENSCGOG00000009508) ##22	gle1 (ENSCGOG00000009276)	ptgesl (ENSCGOG00000009263)	ralgds (ENSCGOG00000009087)	SMARCB1 (ENSCGOG00000008353)	derl3 (ENSCGOG00000008328)	MMP11 (ENSCGOG00000008316)	gstt1a (ENSCGOG00000008299)	p2rx7 (ENSCGOG00000008280)	GPR21 (ENSCGOG00000008275)	ENSCGOG00000008236	ENSCGOG00000008202	ENSCGOG00000008194	sh2d3cb (ENSCGOG00000008188)	tor2a (ENSCGOG00000008183)	ptrh1 (ENSCGOG00000008177)
Pike perch	MODERN SPECIES	2	fgf5 (ENSSLUG00000005136)	prdm8b (ENSSLUG00000005126)	antxr2a (ENSSLUG00000004794)	paqr3a (ENSSLUG00000004747)	bmp2k (ENSSLUG00000004724)	anxa3a (ENSSLUG00000004661)	fras1 (ENSSLUG00000003738)	mrpl1 (ENSSLUG00000003550)	cnot6l (ENSSLUG00000003517)	ENSSLUG00000003509	EEIG1 (ENSSLUG00000003485)	ENSSLUG00000003337	ZDHHC12 (ENSSLUG00000003314)	ENSSLUG00000003284	SET (ENSSLUG00000003221)	odf2b (ENSSLUG00000003180) ##22	gle1 (ENSSLUG00000016320)	ptgesl (ENSSLUG00000016262)	ralgds (ENSSLUG00000016245)	SMARCB1 (ENSSLUG00000016035)	derl3 (ENSSLUG00000016008)	MMP11 (ENSSLUG00000015990)	ENSSLUG00000015980	ENSSLUG00000015970	gstt1a (ENSSLUG00000015954)	p2rx7 (ENSSLUG00000015929)	GPR21 (ENSSLUG00000015921)	ENSSLUG00000015861	ENSSLUG00000015759	ENSSLUG00000015732	sh2d3cb (ENSSLUG00000015486)
Cottioidei	ANCESTRAL SPECIES	27	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000179147	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT00400000024875.c.b
Stickleback	MODERN SPECIES	12									ENSGACG00000014811	ENSGACG00000014809	EEIG1 (ENSGACG00000014808)	ENSGACG00000014794	zdhhc12a (ENSGACG00000014792)	ENSGACG00000014787	SET (ENSGACG00000014785)	ENSGACG00000014783 ##22	gle1 (ENSGACG00000014779)	ptgesl (ENSGACG00000014775)	ralgds (ENSGACG00000014771)	SMARCB1 (ENSGACG00000014767)	derl3 (ENSGACG00000014757)	gstt1a (ENSGACG00000014744)	ENSGACG00000014742	ENSGACG00000014741	ENSGACG00000014739	ENSGACG00000014736	ENSGACG00000014721	nudt12 (ENSGACG00000014719)	ENSGACG00000014713	HIRA (ENSGACG00000014707)	slc2a8 (ENSGACG00000014704)
Lumpfish	MODERN SPECIES	24	antxr2a (ENSCLMG00005010428)	ENSCLMG00005010427	bmp2k (ENSCLMG00005010426)	anxa3a (ENSCLMG00005009784)	ENSCLMG00005009781	ENSCLMG00005009780	fras1 (ENSCLMG00005008462)	mrpl1 (ENSCLMG00005008451)	cnot6l (ENSCLMG00005008450)	ENSCLMG00005008448	EEIG1 (ENSCLMG00005008446)	slc25a25a (ENSCLMG00005008439)	zdhhc12a (ENSCLMG00005008437)	ENSCLMG00005008436	SET (ENSCLMG00005008432)	ENSCLMG00005008426 ##22	gle1 (ENSCLMG00005008417)	ptgesl (ENSCLMG00005008414)	ralgds (ENSCLMG00005008405)	SMARCB1 (ENSCLMG00005008192)	derl3 (ENSCLMG00005008181)	MMP11 (ENSCLMG00005008180)	gstt1a (ENSCLMG00005008179)	p2rx7 (ENSCLMG00005008178)	GPR21 (ENSCLMG00005008175)	ENSCLMG00005008174	ENSCLMG00005008173	sh2d3cb (ENSCLMG00005008141)	tor2a (ENSCLMG00005008139)	ptrh1 (ENSCLMG00005008138)	ENSCLMG00005008136
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b	ENSGT00950000182888.a.b
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b.r	ENSGT00950000182888.a.b	ENSGT00390000004247
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000159428.f	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000154130.a.b.f	ENSGT00940000165787.a.b.r	ENSGT00950000182888.a.b	ENSGT00390000004247
Climbing perch	MODERN SPECIES	22	prdm8b (ENSATEG00000008618)	antxr2a (ENSATEG00000008630)	paqr3a (ENSATEG00000008640)	bmp2k (ENSATEG00000008678)	anxa3a (ENSATEG00000008692)	fras1 (ENSATEG00000008714)	ENSATEG00000028884	mrpl1 (ENSATEG00000008760)	cnot6l (ENSATEG00000008774)	ENSATEG00000008820	ENSATEG00000008850	ENSATEG00000008907	zdhhc12a (ENSATEG00000027259)	ENSATEG00000009001	ENSATEG00000026057	ENSATEG00000009062 ##22	ENSATEG00000009075	ptgesl (ENSATEG00000009084)	ralgds (ENSATEG00000009124)	ENSATEG00000027176	derl3 (ENSATEG00000009257)	ENSATEG00000009276	ENSATEG00000026742	gstt1a (ENSATEG00000009286)	p2rx7 (ENSATEG00000009634)	ENSATEG00000009644	ENSATEG00000009657	sh2d3cb (ENSATEG00000009954)	ENSATEG00000025576	sh2d3cb (ENSATEG00000009759)	ENSATEG00000028243
Siamese fighting fish	MODERN SPECIES	20	prdm8b (ENSBSLG00000020765)	antxr2a (ENSBSLG00000020768)	paqr3a (ENSBSLG00000007818)	bmp2k (ENSBSLG00000007854)	anxa3a (ENSBSLG00000008004)	paqr3a (ENSBSLG00000008209)	mrpl1 (ENSBSLG00000008886)	cnot6l (ENSBSLG00000008890)	ENSBSLG00000009012	EEIG1 (ENSBSLG00000009044)	ENSBSLG00000009141	zdhhc12a (ENSBSLG00000009719)	ENSBSLG00000009827	SET (ENSBSLG00000009862)	ENSBSLG00000009904	odf2b (ENSBSLG00000009914) ##22	gle1 (ENSBSLG00000010071)	ptgesl (ENSBSLG00000010597)	ralgds (ENSBSLG00000010815)	SMARCB1 (ENSBSLG00000011510)	derl3 (ENSBSLG00000011557)	MMP11 (ENSBSLG00000011562)	ENSBSLG00000011566	gstt1a (ENSBSLG00000011589)	p2rx7 (ENSBSLG00000011632)	ENSBSLG00000011715	ENSBSLG00000011751	GPR21 (ENSBSLG00000011763)	ENSBSLG00000011807	sh2d3cb (ENSBSLG00000013065)	ENSBSLG00000013184
Zig-zag eel	MODERN SPECIES	23	fgf5 (ENSMAMG00000016546)	prdm8b (ENSMAMG00000016558)	antxr2a (ENSMAMG00000016575)	paqr3a (ENSMAMG00000016652)	bmp2k (ENSMAMG00000016670)	fras1 (ENSMAMG00000016723)	ENSMAMG00000016921	mrpl1 (ENSMAMG00000016943)	cnot6l (ENSMAMG00000016954)	ENSMAMG00000016994	ENSMAMG00000017016	ENSMAMG00000017059	zdhhc12a (ENSMAMG00000026638)	ENSMAMG00000026069	ENSMAMG00000017088	ENSMAMG00000017108 ##22	ENSMAMG00000017122	ptgesl (ENSMAMG00000017132)	ralgds (ENSMAMG00000017154)	SMARCB1 (ENSMAMG00000024616)	derl3 (ENSMAMG00000025228)	ENSMAMG00000017228	gstt1a (ENSMAMG00000017233)	p2rx7 (ENSMAMG00000017246)	ENSMAMG00000017270	ENSMAMG00000017285	sh2d3cb (ENSMAMG00000017354)	ENSMAMG00000017371	tor2a (ENSMAMG00000017374)	ptrh1 (ENSMAMG00000017386)	ENSMAMG00000017397
Carangaria	ANCESTRAL SPECIES	9	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Carangaria_A	ANCESTRAL SPECIES	64	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT01000000214675	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000172267	ENSGT00770000121806.a	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b
Seriola	ANCESTRAL SPECIES	109										ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT01100000263581	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000165787.a.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b	ENSGT00390000004247
Greater amberjack	MODERN SPECIES	240										EEIG1 (ENSSDUG00000014179)	slc25a25a (ENSSDUG00000014153)	zdhhc12a (ENSSDUG00000014139)	ENSSDUG00000014097	SET (ENSSDUG00000014066)	si:ch211-51h9.7 (ENSSDUG00000014058)	odf2b (ENSSDUG00000014039) ##22	gle1 (ENSSDUG00000014016)	ptgesl (ENSSDUG00000013989)	ralgds (ENSSDUG00000013950)	SMARCB1 (ENSSDUG00000013906)	derl3 (ENSSDUG00000013890)	MMP11 (ENSSDUG00000013867)	tas2r200.1 (ENSSDUG00000013859)	gstt1a (ENSSDUG00000013711)	p2rx7 (ENSSDUG00000013676)	GPR21 (ENSSDUG00000013667)	ENSSDUG00000013638	ugt5a1 (ENSSDUG00000013624)	sh2d3cb (ENSSDUG00000013546)	tor2a (ENSSDUG00000013528)	ptrh1 (ENSSDUG00000013471)
Barramundi perch	MODERN SPECIES	47				paqr3a (ENSLCAG00010006668)	bmp2k (ENSLCAG00010006686)	anxa3a (ENSLCAG00010006716)	fras1 (ENSLCAG00010006776)	mrpl1 (ENSLCAG00010006871)	cnot6l (ENSLCAG00010006876)	ENSLCAG00010006886	EEIG1 (ENSLCAG00010006892)	slc25a25a (ENSLCAG00010006899)	zdhhc12a (ENSLCAG00010006906)	ENSLCAG00010006912	SET (ENSLCAG00010006918)	odf2b (ENSLCAG00010006921) ##22	gle1 (ENSLCAG00010006924)	ptgesl (ENSLCAG00010006928)	ralgds (ENSLCAG00010006941)	SMARCB1 (ENSLCAG00010007012)	derl3 (ENSLCAG00010007026)	MMP11 (ENSLCAG00010007029)	ENSLCAG00010007034	ENSLCAG00010007038	gstt1a (ENSLCAG00010007044)	p2rx7 (ENSLCAG00010007049)	GPR21 (ENSLCAG00010007054)	ENSLCAG00010007060	sh2d3cb (ENSLCAG00010007094)	ENSLCAG00010007135	tor2a (ENSLCAG00010007143)
Pleuronectoidei	ANCESTRAL SPECIES	34	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000159174.f	ENSGT00940000163761	ENSGT00940000162168	ENSGT00940000157298	ENSGT00940000156811.a	ENSGT00940000157207.a.b	ENSGT00940000156902.a	ENSGT00940000164790.b	ENSGT00940000153877.a.b	ENSGT00530000065225	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00390000000224	ENSGT00940000153181	ENSGT00440000038585.d	ENSGT00530000063156.a.a.b	ENSGT00940000156340.a.c	ENSGT00940000163205.c	ENSGT01020000230351.D.a.a.b	ENSGT00940000163543.a	ENSGT00940000154687.B.q.b	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.a.a
Turbot	MODERN SPECIES	21	prdm8b (ENSSMAG00000032252)	antxr2a (ENSSMAG00000015047)	paqr3a (ENSSMAG00000015141)	bmp2k (ENSSMAG00000015159)	anxa3a (ENSSMAG00000015210)	fras1 (ENSSMAG00000015329)	ENSSMAG00000027126	ENSSMAG00000022919	mrpl1 (ENSSMAG00000015530)	cnot6l (ENSSMAG00000015568)	ENSSMAG00000015602	ENSSMAG00000015655	zdhhc12a (ENSSMAG00000028113)	ENSSMAG00000015733	ENSSMAG00000015773	ENSSMAG00000015844 ##22	ENSSMAG00000015860	ptgesl (ENSSMAG00000015877)	ralgds (ENSSMAG00000015906)	ENSSMAG00000029205	ENSSMAG00000015939	derl3 (ENSSMAG00000015971)	ENSSMAG00000015981	p2rx7 (ENSSMAG00000016255)	ENSSMAG00000016300	ENSSMAG00000016310	sh2d3cb (ENSSMAG00000016469)	ENSSMAG00000024377	ptrh1 (ENSSMAG00000016747)	ENSSMAG00000028130	ENSSMAG00000016763
Tongue sole	MODERN SPECIES	398	zgc:64051 (ENSCSEG00000016047)	araf (ENSCSEG00000016061)	imp4 (ENSCSEG00000016100)	RABL6 (ENSCSEG00000016135)	ENSCSEG00000016195	ENSCSEG00000016204	tncb (ENSCSEG00000016218)	ENSCSEG00000016251	ENSCSEG00000016262	nsmfb (ENSCSEG00000016316)	ENSCSEG00000016330	zdhhc12a (ENSCSEG00000016342)	ENSCSEG00000016350	SET (ENSCSEG00000016359)	si:ch211-51h9.7 (ENSCSEG00000016367)	odf2b (ENSCSEG00000016371) ##22	ciao1 (ENSCSEG00000016379)	snrnp200 (ENSCSEG00000016399)	zfand5a (ENSCSEG00000016490)	TMC1 (ENSCSEG00000016502)	tmc2b (ENSCSEG00000016512)	ENSCSEG00000016519	jak2b (ENSCSEG00000016532)	gldc (ENSCSEG00000016569)	MN1 (ENSCSEG00000016576)	PITPNB (ENSCSEG00000016581)	TTC28 (ENSCSEG00000016594)	SDS (ENSCSEG00000016621)	HECTD4 (ENSCSEG00000016640)	ENSCSEG00000016713	ENSCSEG00000016761
Tiger tail seahorse	MODERN SPECIES	33													zdhhc12a (ENSHCOG00000016750)	SET (ENSHCOG00000000472)	si:ch211-51h9.7 (ENSHCOG00000016714)	ENSHCOG00000016703 ##22	ptgesl (ENSHCOG00000016697)	ralgds (ENSHCOG00000016681)	SMARCB1 (ENSHCOG00000016642)	MMP11 (ENSHCOG00000016639)	ENSHCOG00000016631	gstt1a (ENSHCOG00000016600)	p2rx7 (ENSHCOG00000016180)
Pinecone sodierfish	MODERN SPECIES	23	paqr3a (ENSMMDG00005013079)	fbl (ENSMMDG00005013082)	bmp2k (ENSMMDG00005013085)	anxa3a (ENSMMDG00005013089)	mrpl1 (ENSMMDG00005013349)	cnot6l (ENSMMDG00005013356)	ENSMMDG00005013357	ENSMMDG00005013360	ENSMMDG00005013363	EEIG1 (ENSMMDG00005013369)	ENSMMDG00005013373	slc25a25a (ENSMMDG00005013380)	zdhhc12a (ENSMMDG00005013721)	ENSMMDG00005013725	SET (ENSMMDG00005013727)	odf2b (ENSMMDG00005013732) ##22	gle1 (ENSMMDG00005013734)	ptgesl (ENSMMDG00005013751)	ralgds (ENSMMDG00005013756)	ENSMMDG00005013800	SMARCB1 (ENSMMDG00005013807)	derl3 (ENSMMDG00005013834)	MMP11 (ENSMMDG00005013836)	gstt1a (ENSMMDG00005013838)	p2rx7 (ENSMMDG00005013839)	GPR21 (ENSMMDG00005013840)	ENSMMDG00005013845	cfap157 (ENSMMDG00005013847)	sh2d3cb (ENSMMDG00005013848)	ENSMMDG00005013849	ENSMMDG00005013850
Osteoglossiformes	ANCESTRAL SPECIES	75	ENSGT00940000153592.B.b.a.b	ENSGT01030000234555.a.a.a.c.b.a.b	ENSGT00390000000571.c	ENSGT00610000086153	ENSGT00940000154890.b	ENSGT01020000230351.D.a.a.a	ENSGT00940000163205.d	ENSGT00940000166931	ENSGT00940000161345	ENSGT00940000156340.a.c.e	ENSGT00440000038585.c.b	ENSGT00940000153181	ENSGT00940000158674.d	ENSGT00530000063187.A	ENSGT00390000000224	ENSGT00530000063497.a.b ##22	ENSGT00390000012903	ENSGT00940000156662.c.b.a	ENSGT00530000065225	ENSGT00940000164790.b	ENSGT00940000156902.a	ENSGT00940000157207.a.b	ENSGT00450000040324.b.g	ENSGT00940000156811.a	ENSGT00990000204366	ENSGT00940000158633.a.b	ENSGT00940000155841	ENSGT01060000248544.b	ENSGT00940000167171	ENSGT00550000074961.a.a	ENSGT00390000009566.d
Asian bonytongue	MODERN SPECIES	8	specc1la (ENSSFOG00015006848)	ADORA2A (ENSSFOG00015024949)	ENSSFOG00015032423	upb1 (ENSSFOG00015006967)	ENSSFOG00015007002	p2rx4b (ENSSFOG00015007037)	p2rx7 (ENSSFOG00015007231)	tas2r200.1 (ENSSFOG00015007316)	gstt1a (ENSSFOG00015007325)	MMP11 (ENSSFOG00015007330)	derl3 (ENSSFOG00015007364)	ralgds (ENSSFOG00015013973)	TBC1D13 (ENSSFOG00015028346)	ZER1 (ENSSFOG00015007625)	ptgesl (ENSSFOG00015007700)	odf2b (ENSSFOG00015007715) ##22	gle1 (ENSSFOG00015007734)	sptan1 (ENSSFOG00015007793)	seta (ENSSFOG00015032911)	ENSSFOG00015007935	zdhhc12a (ENSSFOG00015007960)	slc25a25a (ENSSFOG00015007970)	naif1 (ENSSFOG00015024623)	EEIG1 (ENSSFOG00015032495)	ENSSFOG00015008089	PIP5KL1 (ENSSFOG00015008125)	SH3GLB2 (ENSSFOG00015008180)	ENSSFOG00015008262	ENSSFOG00015026015	PPP6C (ENSSFOG00015008382)	SCAI (ENSSFOG00015008413)
Spotted gar	MODERN SPECIES	660	ttf1.1 (ENSLOCG00000005572)	cfap77 (ENSLOCG00000005588)	barhl1a (ENSLOCG00000005607)	DDX31 (ENSLOCG00000005630)	GTF3C4 (ENSLOCG00000005643)	ak8 (ENSLOCG00000005659)	spaca9 (ENSLOCG00000005672)	tsc1a (ENSLOCG00000005714)	GFI1B (ENSLOCG00000005750)	GTF3C5 (ENSLOCG00000005767)	cel.1 (ENSLOCG00000005785)	ralgds (ENSLOCG00000005803)	TBC1D13 (ENSLOCG00000005818)	zer1 (ENSLOCG00000005833)	ptgesl (ENSLOCG00000005855)	odf2b (ENSLOCG00000005870) ##22	gle1 (ENSLOCG00000005909)	sptan1 (ENSLOCG00000005929)	dync2i2 (ENSLOCG00000005978)	dync2i2 (ENSLOCG00000005989)	si:ch211-51h9.7 (ENSLOCG00000006014)	setb (ENSLOCG00000006027)	ENSLOCG00000006047	zdhhc12a (ENSLOCG00000006071)	uap1l1 (ENSLOCG00000006083)	slc25a25a (ENSLOCG00000006102)	naif1 (ENSLOCG00000006120)	eeig1b (ENSLOCG00000006144)	dpm2 (ENSLOCG00000006158)	PIP5KL1 (ENSLOCG00000006176)	sh3glb2b (ENSLOCG00000006193)
Reedfish	MODERN SPECIES	17	cfap77 (ENSECRG00000007980)	barhl1a (ENSECRG00000007990)	DDX31 (ENSECRG00000008009)	GTF3C4 (ENSECRG00000008028)	ak8 (ENSECRG00000008061)	spaca9 (ENSECRG00000008164)	tsc1a (ENSECRG00000008186)	GFI1B (ENSECRG00000008218)	GTF3C5 (ENSECRG00000008234)	cel.1 (ENSECRG00000008266)	ralgds (ENSECRG00000008311)	ENSECRG00000008346	TBC1D13 (ENSECRG00000008362)	zer1 (ENSECRG00000008379)	ptgesl (ENSECRG00000008395)	odf2b (ENSECRG00000008409) ##22	ENSECRG00000008436	sptan1 (ENSECRG00000008483)	dync2i2 (ENSECRG00000008558)	setb (ENSECRG00000008570)	ENSECRG00000008621	zdhhc12a (ENSECRG00000008689)	uap1l1 (ENSECRG00000008710)	slc25a23b (ENSECRG00000008759)	naif1 (ENSECRG00000008813)	eeig1b (ENSECRG00000008830)	dpm2 (ENSECRG00000008853)	PIP5KL1 (ENSECRG00000008873)	sh3glb2b (ENSECRG00000008916)	PRRT1B (ENSECRG00000008954)	uck1 (ENSECRG00000008969)
Sarcopterygii	ANCESTRAL SPECIES	82		ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000177597	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT00940000153877	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797
Tetrapoda	ANCESTRAL SPECIES	34	ENSGT00940000155373	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742	ENSGT00940000155841
Amniota	ANCESTRAL SPECIES	27	ENSGT00950000182888.a.b	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742	ENSGT00940000155841
Sauria	ANCESTRAL SPECIES	22	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a
Lepidosauria	ANCESTRAL SPECIES	21	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Episquamata	ANCESTRAL SPECIES	15	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00960000191310	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194	ENSGT00940000157936	ENSGT00940000153391.c.b.a	ENSGT00940000161534	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000158540	ENSGT00940000156261	ENSGT00950000183101.a.b.b	ENSGT00940000154687.B	ENSGT00940000157216	ENSGT00940000163543
Laterata	ANCESTRAL SPECIES	20	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00960000191310	ENSGT00940000156773	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194	ENSGT00940000157936	ENSGT00940000153391.c.b.a	ENSGT00940000161534	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000158540	ENSGT00940000156261	ENSGT00950000183101.a.b.b	ENSGT00940000154687.B	ENSGT00940000157216	ENSGT00940000163543
Common wall lizard	MODERN SPECIES	419	ENSPMRG00000023620	ENSPMRG00000023617	PTRH1 (ENSPMRG00000023614)	CFAP157 (ENSPMRG00000023611)	CERCAM (ENSPMRG00000023572)	URM1 (ENSPMRG00000023569)	SLC27A4 (ENSPMRG00000023568)	COQ4 (ENSPMRG00000023567)	ENSPMRG00000023566	TRUB2 (ENSPMRG00000023565)	ENSPMRG00000023564	ENSPMRG00000023562	DNM1 (ENSPMRG00000023474)	ENSPMRG00000023444	PTGES2 (ENSPMRG00000023439)	ODF2 (ENSPMRG00000023433) ##22	FUT7 (ENSPMRG00000023431)	ABCA2 (ENSPMRG00000023312)	ENSPMRG00000023231	ENTPD2 (ENSPMRG00000023220)	SAPCD2 (ENSPMRG00000023214)	UAP1L1 (ENSPMRG00000023207)	MAN1B1 (ENSPMRG00000023196)	ENSPMRG00000023188	DPP7 (ENSPMRG00000023182)	ENSPMRG00000023179	ENSPMRG00000023176	GLT6D1 (ENSPMRG00000023173)	ENSPMRG00000023170	DAB2IP (ENSPMRG00000023161)	TTLL11 (ENSPMRG00000023154)
Argentine black and white tegu	MODERN SPECIES	52	ENSSMRG00000011315	ENSSMRG00000011318	ENSSMRG00000011321	ENSSMRG00000011322	ENSSMRG00000011323	ENSSMRG00000011325	ENSSMRG00000011327	ENSSMRG00000011329	ENSSMRG00000011341	ENSSMRG00000011348	DNM1 (ENSSMRG00000011371)	ENSSMRG00000011375	CIZ1 (ENSSMRG00000011376)	BBLN (ENSSMRG00000011377)	PTGES2 (ENSSMRG00000011378)	ODF2 (ENSSMRG00000011379) ##22	GLE1 (ENSSMRG00000011380)	SPTAN1 (ENSSMRG00000011381)	DYNC2I2 (ENSSMRG00000011392)	ENSSMRG00000011395	OLFML2A (ENSSMRG00000011397)	NR6A1 (ENSSMRG00000011400)	NR5A1 (ENSSMRG00000011420)	ADGRD2 (ENSSMRG00000011422)	PSMB7 (ENSSMRG00000011425)	NEK6 (ENSSMRG00000011428)	LHX2 (ENSSMRG00000011455)	DENND1A (ENSSMRG00000011462)	CRB2 (ENSSMRG00000011466)	STRBP (ENSSMRG00000011471)	RABGAP1 (ENSSMRG00000011478)
Toxicofera	ANCESTRAL SPECIES	33	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00960000191310	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00940000164950	ENSGT00940000166869	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d.a	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194	ENSGT00940000157936	ENSGT00940000153391.c.b.a	ENSGT00940000161534	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000158540	ENSGT00940000156261	ENSGT00950000183101.a.b.b	ENSGT00940000154687.B	ENSGT00940000157216
Elapidae	ANCESTRAL SPECIES	18	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00960000191310	ENSGT00940000156773	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00940000166869	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194	ENSGT00940000157936	ENSGT00940000153391.c.b.a	ENSGT00940000161534	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000158540	ENSGT00940000156261	ENSGT00950000183101.a.b.b	ENSGT00940000154687.B	ENSGT00940000157216	ENSGT00940000157920.a
Elapidae_a	ANCESTRAL SPECIES	53	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00960000191310	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00940000166869	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194	ENSGT00940000157936	ENSGT00940000153391.c.b.a	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000158540	ENSGT00940000156261	ENSGT00940000160615.a.b.pb.b	ENSGT00940000167684	ENSGT00940000154687.B	ENSGT00940000157216.a.a	ENSGT00940000157216.a.b
Acanthophiinae	ANCESTRAL SPECIES	48	ENSGT00390000004550	ENSGT00390000004247	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00960000191310	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00940000166869	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d.b	ENSGT00940000158483	ENSGT00940000157194	ENSGT00940000157936	ENSGT00940000153391.c.b.a	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000158540	ENSGT00940000156261	ENSGT00940000160615.a.b.pb.b	ENSGT00940000167684	ENSGT00940000154687.B.o	ENSGT00940000157216.a.a	ENSGT00940000157216.a.b
Mainland tiger snake	MODERN SPECIES	688														BBLN (ENSNSUG00000016533)	PTGES2 (ENSNSUG00000016532)	ODF2 (ENSNSUG00000016531) ##22	ENSNSUG00000016529	ENSNSUG00000016528
Eastern brown snake	MODERN SPECIES	54	TOR2A (ENSPTXG00000006862)	TTC16 (ENSPTXG00000006859)	PTRH1 (ENSPTXG00000006856)	ENSPTXG00000006855	URM1 (ENSPTXG00000006853)	SLC27A4 (ENSPTXG00000006851)	COQ4 (ENSPTXG00000006837)	ENSPTXG00000011535	TRUB2 (ENSPTXG00000011534)	SWI5 (ENSPTXG00000011533)	ENSPTXG00000011532	DNM1 (ENSPTXG00000011528)	ENSPTXG00000011527	ENSPTXG00000011526	PTGES2 (ENSPTXG00000011525)	ODF2 (ENSPTXG00000011377) ##22	GLE1 (ENSPTXG00000011368)	SPTAN1 (ENSPTXG00000009090)	DYNC2I2 (ENSPTXG00000009052)	OLFML2A (ENSPTXG00000009050)	NR6A1 (ENSPTXG00000009049)	NR5A1 (ENSPTXG00000008944)	PSMB7 (ENSPTXG00000008942)	NEK6 (ENSPTXG00000008940)	LHX2 (ENSPTXG00000008939)	DENND1A (ENSPTXG00000008938)	ENSPTXG00000008937	ENSPTXG00000008936	ENSPTXG00000008935	RABGAP1 (ENSPTXG00000008930)	ZBTB26 (ENSPTXG00000008926)
Blue-lipped sea krait	MODERN SPECIES	3766																ODF2 (ENSLLTG00000002864) ##22	GLE1 (ENSLLTG00000002847)	SPTAN1 (ENSLLTG00000002760)	DYNC2I2 (ENSLLTG00000002715)	OLFML2A (ENSLLTG00000002702)
Indian cobra	MODERN SPECIES	8	PTRH1 (ENSNNAG00000019019)	CFAP157 (ENSNNAG00000019014)	CERCAM (ENSNNAG00000019007)	URM1 (ENSNNAG00000019001)	SLC27A4 (ENSNNAG00000018998)	ENSNNAG00000018995	TRUB2 (ENSNNAG00000018991)	COQ4 (ENSNNAG00000018986)	SWI5 (ENSNNAG00000018982)	ENSNNAG00000018971	ENSNNAG00000018968	DNM1 (ENSNNAG00000018402)	ENSNNAG00000018209	BBLN (ENSNNAG00000018207)	PTGES2 (ENSNNAG00000018202)	ODF2 (ENSNNAG00000018197) ##22	GLE1 (ENSNNAG00000018191)	SPTAN1 (ENSNNAG00000014617)	DYNC2I2 (ENSNNAG00000013945)	NR6A1 (ENSNNAG00000013915)	NR5A1 (ENSNNAG00000013903)	ADGRD2 (ENSNNAG00000013875)	PSMB7 (ENSNNAG00000013841)	NEK6 (ENSNNAG00000013809)	LHX2 (ENSNNAG00000013790)	DENND1A (ENSNNAG00000013708)	CRB2 (ENSNNAG00000013681)	STRBP (ENSNNAG00000013632)	RABGAP1 (ENSNNAG00000013110)	ZBTB26 (ENSNNAG00000013061)	ZBTB6 (ENSNNAG00000013051)
tuatara	MODERN SPECIES	746	HMGCS2 (ENSSPUG00000000080)	NOTCH2 (ENSSPUG00000000062)	SEC22B (ENSSPUG00000000051)	PTRH1 (ENSSPUG00000000040)	CFAP157 (ENSSPUG00000015602)	URM1 (ENSSPUG00000015548)	SLC27A4 (ENSSPUG00000015536)	COQ4 (ENSSPUG00000015526)	TRUB2 (ENSSPUG00000015515)	SWI5 (ENSSPUG00000015500)	ENSSPUG00000015440	DNM1 (ENSSPUG00000015376)	CIZ1 (ENSSPUG00000015347)	BBLN (ENSSPUG00000015338)	PTGES2 (ENSSPUG00000015335)	ODF2 (ENSSPUG00000015294) ##22	GLE1 (ENSSPUG00000015268)	SPTAN1 (ENSSPUG00000014584)	DYNC2I2 (ENSSPUG00000014383)	SET (ENSSPUG00000014327)	PKN1 (ENSSPUG00000014203)	ZDHHC12 (ENSSPUG00000014168)	ZER1 (ENSSPUG00000014152)	ENSSPUG00000014145	TBC1D13 (ENSSPUG00000014090)	SPOUT1 (ENSSPUG00000014052)	KYAT1 (ENSSPUG00000014008)	LRRC8A (ENSSPUG00000013994)	ENSSPUG00000013984	PHYHD1 (ENSSPUG00000013902)	DOLK (ENSSPUG00000013885)
Archelosauria	ANCESTRAL SPECIES	28	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a
Archosauria	ANCESTRAL SPECIES	25	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Aves	ANCESTRAL SPECIES	21	ENSGT00950000182888.a.b	ENSGT00390000004550	ENSGT00390000004247	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Neognathae	ANCESTRAL SPECIES	20	ENSGT00950000182888.a.b	ENSGT00390000004550	ENSGT00390000004247	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Neognathae_b	ANCESTRAL SPECIES	21	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Passeriformes	ANCESTRAL SPECIES	20	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Great tit	MODERN SPECIES	7	CDK9 (ENSPMJG00000009549)	SH2D3C (ENSPMJG00000009546)	TOR2A (ENSPMJG00000009545)	PTRH1 (ENSPMJG00000009541)	CERCAM (ENSPMJG00000009540)	URM1 (ENSPMJG00000009536)	SLC27A4 (ENSPMJG00000009533)	COQ4 (ENSPMJG00000009531)	TRUB2 (ENSPMJG00000009530)	ENSPMJG00000009523	ENSPMJG00000009515	DNM1 (ENSPMJG00000009509)	CIZ1 (ENSPMJG00000009507)	BBLN (ENSPMJG00000009487)	PTGES2 (ENSPMJG00000009486)	ODF2 (ENSPMJG00000009485) ##22	GLE1 (ENSPMJG00000009484)	SPTAN1 (ENSPMJG00000009478)	DYNC2I2 (ENSPMJG00000009476)	SET (ENSPMJG00000009474)	ENSPMJG00000009473	ZDHHC12 (ENSPMJG00000009472)	ZER1 (ENSPMJG00000009471)	TBC1D13 (ENSPMJG00000009470)	ENDOG (ENSPMJG00000009468)	SPOUT1 (ENSPMJG00000009467)	KYAT1 (ENSPMJG00000009466)	LRRC8A (ENSPMJG00000009465)	PHYHD1 (ENSPMJG00000009464)	DOLK (ENSPMJG00000009463)	NUP188 (ENSPMJG00000007061)
Passeriformes_d	ANCESTRAL SPECIES	20	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903.j	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Passeriformes_g	ANCESTRAL SPECIES	21	ENSGT00940000155373	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903.j	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Medium ground finch	MODERN SPECIES	32	CDK9 (ENSGFOG00000004255)	SH2D3C (ENSGFOG00000004224)	TOR2A (ENSGFOG00000004206)	PTRH1 (ENSGFOG00000004200)	CERCAM (ENSGFOG00000004058)	URM1 (ENSGFOG00000004031)	SLC27A4 (ENSGFOG00000004019)	COQ4 (ENSGFOG00000004007)	TRUB2 (ENSGFOG00000003933)	SWI5 (ENSGFOG00000003912)	ENSGFOG00000003835	DNM1 (ENSGFOG00000003719)	CIZ1 (ENSGFOG00000003683)	ENSGFOG00000003672	PTGES2 (ENSGFOG00000003661)	ODF2 (ENSGFOG00000003599) ##22	GLE1 (ENSGFOG00000003574)	SPTAN1 (ENSGFOG00000000781)	DYNC2I2 (ENSGFOG00000000266)	SET (ENSGFOG00000000081)	ENSGFOG00000011070	ZDHHC12 (ENSGFOG00000011048)	ZER1 (ENSGFOG00000011036)	TBC1D13 (ENSGFOG00000011027)	ENDOG (ENSGFOG00000011016)	SPOUT1 (ENSGFOG00000011003)	KYAT1 (ENSGFOG00000010993)	LRRC8A (ENSGFOG00000010987)	PHYHD1 (ENSGFOG00000010973)	DOLK (ENSGFOG00000010962)	ENSGFOG00000010960
Passeroidea	ANCESTRAL SPECIES	21	ENSGT00940000155373	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903.j	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Zebra finch	MODERN SPECIES	8	FPGS (ENSTGUG00000003578)	CDK9 (ENSTGUG00000003597)	SH2D3C (ENSTGUG00000003600)	TOR2A (ENSTGUG00000003633)	PTRH1 (ENSTGUG00000003648)	CERCAM (ENSTGUG00000028849)	SLC27A4 (ENSTGUG00000003658)	COQ4 (ENSTGUG00000003696)	TRUB2 (ENSTGUG00000003704)	SWI5 (ENSTGUG00000003717)	ENSTGUG00000003721	DNM1 (ENSTGUG00000003768)	ENSTGUG00000020267	CIZ1 (ENSTGUG00000003828)	PTGES2 (ENSTGUG00000003851)	ODF2 (ENSTGUG00000003863) ##22	GLE1 (ENSTGUG00000003910)	SPTAN1 (ENSTGUG00000003937)	DYNC2I2 (ENSTGUG00000004041)	SET (ENSTGUG00000004063)	PKN1 (ENSTGUG00000004079)	ZDHHC12 (ENSTGUG00000019700)	ZER1 (ENSTGUG00000004153)	TBC1D13 (ENSTGUG00000004176)	ENDOG (ENSTGUG00000004197)	SPOUT1 (ENSTGUG00000004201)	KYAT1 (ENSTGUG00000004212)	LRRC8A (ENSTGUG00000004233)	PHYHD1 (ENSTGUG00000004236)	DOLK (ENSTGUG00000004256)	NUP188 (ENSTGUG00000004258)
Common canary	MODERN SPECIES	22	CDK9 (ENSSCAG00000006447)	SH2D3C (ENSSCAG00000006435)	TOR2A (ENSSCAG00000006425)	PTRH1 (ENSSCAG00000006422)	CERCAM (ENSSCAG00000006417)	URM1 (ENSSCAG00000006405)	SLC27A4 (ENSSCAG00000006395)	COQ4 (ENSSCAG00000006390)	TRUB2 (ENSSCAG00000006386)	SWI5 (ENSSCAG00000006379)	ENSSCAG00000006356	DNM1 (ENSSCAG00000006341)	CIZ1 (ENSSCAG00000006337)	BBLN (ENSSCAG00000006332)	PTGES2 (ENSSCAG00000006331)	ODF2 (ENSSCAG00000006316) ##22	ENSSCAG00000006295	SPTAN1 (ENSSCAG00000005345)	DYNC2I2 (ENSSCAG00000005158)	SET (ENSSCAG00000005153)	ENSSCAG00000005143	ZDHHC12 (ENSSCAG00000005137)	ZER1 (ENSSCAG00000005129)	TBC1D13 (ENSSCAG00000005124)	ENDOG (ENSSCAG00000005120)	SPOUT1 (ENSSCAG00000005117)	KYAT1 (ENSSCAG00000005111)	LRRC8A (ENSSCAG00000005107)	PHYHD1 (ENSSCAG00000005104)	DOLK (ENSSCAG00000005101)	NUP188 (ENSSCAG00000005083)
Flycatcher	MODERN SPECIES	7	SH2D3C (ENSFALG00000001345)	TOR2A (ENSFALG00000028744)	PTRH1 (ENSFALG00000026698)	CERCAM (ENSFALG00000001355)	URM1 (ENSFALG00000001360)	SLC27A4 (ENSFALG00000001362)	COQ4 (ENSFALG00000001363)	TRUB2 (ENSFALG00000001364)	SWI5 (ENSFALG00000023373)	ENSFALG00000023936	ENSFALG00000001370	DNM1 (ENSFALG00000001379)	CIZ1 (ENSFALG00000001382)	C9orf16 (ENSFALG00000027481)	PTGES2 (ENSFALG00000001388)	ODF2 (ENSFALG00000001396) ##22	GLE1 (ENSFALG00000001404)	SPTAN1 (ENSFALG00000001408)	DYNC2I2 (ENSFALG00000001411)	SET (ENSFALG00000026406)	ENSFALG00000001414	ZDHHC12 (ENSFALG00000001415)	ZER1 (ENSFALG00000001417)	TBC1D13 (ENSFALG00000001419)	ENDOG (ENSFALG00000001421)	SPOUT1 (ENSFALG00000028767)	KYAT1 (ENSFALG00000001422)	LRRC8A (ENSFALG00000001423)	PHYHD1 (ENSFALG00000001424)	DOLK (ENSFALG00000015268)	ENSFALG00000024290
Neognathae_c	ANCESTRAL SPECIES	25	ENSGT00940000155373	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Kakapo	MODERN SPECIES	9	FPGS (ENSSHBG00005016431)	CDK9 (ENSSHBG00005016419)	SH2D3C (ENSSHBG00005016399)	TOR2A (ENSSHBG00005016385)	CERCAM (ENSSHBG00005016380)	URM1 (ENSSHBG00005016363)	SLC27A4 (ENSSHBG00005016357)	COQ4 (ENSSHBG00005016349)	TRUB2 (ENSSHBG00005016344)	SWI5 (ENSSHBG00005016337)	ENSSHBG00005016331	DNM1 (ENSSHBG00005016315)	CIZ1 (ENSSHBG00005016302)	BBLN (ENSSHBG00005016291)	PTGES2 (ENSSHBG00005016283)	ODF2 (ENSSHBG00005016184) ##22	GLE1 (ENSSHBG00005016146)	SPTAN1 (ENSSHBG00005016133)	DYNC2I2 (ENSSHBG00005016116)	SET (ENSSHBG00005016110)	ENSSHBG00005012668	ZDHHC12 (ENSSHBG00005012414)	ZER1 (ENSSHBG00005012394)	TBC1D13 (ENSSHBG00005012377)	ENDOG (ENSSHBG00005012358)	SPOUT1 (ENSSHBG00005012342)	KYAT1 (ENSSHBG00005012305)	LRRC8A (ENSSHBG00005012289)	PHYHD1 (ENSSHBG00005012261)	DOLK (ENSSHBG00005012238)	NUP188 (ENSSHBG00005012197)
Golden eagle	MODERN SPECIES	16	FPGS (ENSACCG00020016994)	CDK9 (ENSACCG00020016995)	TOR2A (ENSACCG00020016996)	PTRH1 (ENSACCG00020016997)	CERCAM (ENSACCG00020016998)	URM1 (ENSACCG00020017002)	SLC27A4 (ENSACCG00020017003)	COQ4 (ENSACCG00020017004)	TRUB2 (ENSACCG00020017005)	SWI5 (ENSACCG00020017007)	ENSACCG00020017008	DNM1 (ENSACCG00020017009)	CIZ1 (ENSACCG00020017011)	BBLN (ENSACCG00020017012)	PTGES2 (ENSACCG00020017013)	ODF2 (ENSACCG00020011573) ##22	GLE1 (ENSACCG00020011619)	SPTAN1 (ENSACCG00020011797)	DYNC2I2 (ENSACCG00020011996)	SET (ENSACCG00020012052)	ENSACCG00020012086	ZDHHC12 (ENSACCG00020012116)	ZER1 (ENSACCG00020012155)	TBC1D13 (ENSACCG00020012196)	ENDOG (ENSACCG00020012216)	SPOUT1 (ENSACCG00020012243)	KYAT1 (ENSACCG00020012286)	LRRC8A (ENSACCG00020012328)	PHYHD1 (ENSACCG00020012351)	DOLK (ENSACCG00020012372)	ENSACCG00020012391
Galloanserae	ANCESTRAL SPECIES	22	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004550	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Anatidae	ANCESTRAL SPECIES	13	ENSGT00940000155373	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004550	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Duck	MODERN SPECIES	8	PMPCA (ENSAPLG00000007036)	INPP5E (ENSAPLG00000006952)	SEC16A (ENSAPLG00000006353)	ENSAPLG00000004580	ENSAPLG00000018316	EGFL7 (ENSAPLG00000004308)	DIPK1B (ENSAPLG00000004075)	MRPS2 (ENSAPLG00000004062)	PIERCE1 (ENSAPLG00000017643)	SWI5 (ENSAPLG00000004039)	ENSAPLG00000003401	DNM1 (ENSAPLG00000001168)	ENSAPLG00000000626	ENSAPLG00000001607	PTGES2 (ENSAPLG00000028885)	ODF2 (ENSAPLG00000016367) ##22	GLE1 (ENSAPLG00000016355)	SPTAN1 (ENSAPLG00000014718)	DYNC2I2 (ENSAPLG00000014296)	SET (ENSAPLG00000013781)	ENSAPLG00000013093	ZDHHC12 (ENSAPLG00000012997)	ZER1 (ENSAPLG00000012789)	TBC1D13 (ENSAPLG00000004702)	ENDOG (ENSAPLG00000004952)	SPOUT1 (ENSAPLG00000005094)	KYAT1 (ENSAPLG00000005215)	LRRC8A (ENSAPLG00000005396)	PHYHD1 (ENSAPLG00000028351)	NUP188 (ENSAPLG00000005569)	SH3GLB2 (ENSAPLG00000006680)
Pink-footed goose	MODERN SPECIES	8	SH2D3C (ENSABRG00000000726)	TOR2A (ENSABRG00000000799)	ENSABRG00000000864	CERCAM (ENSABRG00000000906)	ENSABRG00000000944	URM1 (ENSABRG00000000954)	SLC27A4 (ENSABRG00000001008)	COQ4 (ENSABRG00000001045)	TRUB2 (ENSABRG00000001069)	SWI5 (ENSABRG00000001181)	ENSABRG00000001208	DNM1 (ENSABRG00000001951)	ENSABRG00000010654	BBLN (ENSABRG00000010663)	PTGES2 (ENSABRG00000010678)	ODF2 (ENSABRG00000010736) ##22	GLE1 (ENSABRG00000010870)	SPTAN1 (ENSABRG00000011823)	DYNC2I2 (ENSABRG00000019062)	SET (ENSABRG00000019082)	PKN1 (ENSABRG00000019253)	ZDHHC12 (ENSABRG00000019986)	ZER1 (ENSABRG00000020000)	TBC1D13 (ENSABRG00000020114)	ENDOG (ENSABRG00000020139)	SPOUT1 (ENSABRG00000020142)	KYAT1 (ENSABRG00000020163)	LRRC8A (ENSABRG00000020227)	PHYHD1 (ENSABRG00000020228)	DOLK (ENSABRG00000020229)	NUP188 (ENSABRG00000020273)
Phasianidae	ANCESTRAL SPECIES	20	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004550	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Phasianidae_b	ANCESTRAL SPECIES	19	ENSGT00940000154130.a.b	ENSGT00950000182888.a.b	ENSGT00390000004550	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00940000164950	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Turkey	MODERN SPECIES	10	CDK9 (ENSMGAG00000003747)	SH2D3C (ENSMGAG00000003752)	TOR2A (ENSMGAG00000003777)	ENSMGAG00000003783	SLC27A4 (ENSMGAG00000003827)	COQ4 (ENSMGAG00000020461)	ENSMGAG00000003894	SWI5 (ENSMGAG00000003900)	ENSMGAG00000018377	ENSMGAG00000003909	DNM1 (ENSMGAG00000003998)	ENSMGAG00000004093	CIZ1 (ENSMGAG00000004067)	ENSMGAG00000015777	PTGES2 (ENSMGAG00000004087)	ODF2 (ENSMGAG00000004272) ##22	GLE1 (ENSMGAG00000004391)	DYNC2I2 (ENSMGAG00000004399)	SET (ENSMGAG00000004425)	ENSMGAG00000004448	ZDHHC12 (ENSMGAG00000004548)	ZER1 (ENSMGAG00000004629)	TBC1D13 (ENSMGAG00000004524)	ENDOG (ENSMGAG00000004558)	SPOUT1 (ENSMGAG00000004568)	KYAT1 (ENSMGAG00000004594)	LRRC8A (ENSMGAG00000004668)	PHYHD1 (ENSMGAG00000004680)	DOLK (ENSMGAG00000015779)	NUP188 (ENSMGAG00000004695)	SH3GLB2 (ENSMGAG00000004815)
Chicken	MODERN SPECIES	8	CDK9 (ENSGALG00010028095)	SH2D3C (ENSGALG00010029143)	TOR2A (ENSGALG00010028096)	ENSGALG00010028100	CERCAM (ENSGALG00010028102)	URM1 (ENSGALG00010027388)	SLC27A4 (ENSGALG00010027394)	COQ4 (ENSGALG00010028110)	TRUB2 (ENSGALG00010028111)	SWI5 (ENSGALG00010028112)	ENSGALG00010028118	DNM1 (ENSGALG00010028128)	CIZ1 (ENSGALG00010028155)	BBLN (ENSGALG00010028164)	PTGES2 (ENSGALG00010028168)	ODF2 (ENSGALG00010028180) ##22	GLE1 (ENSGALG00010027583)	SPTAN1 (ENSGALG00010028556)	WDR34 (ENSGALG00010028559)	SET (ENSGALG00010028561)	PKN3 (ENSGALG00010028565)	ZDHHC12 (ENSGALG00010028566)	ZER1 (ENSGALG00010028569)	TBC1D13 (ENSGALG00010028572)	ENDOG (ENSGALG00010028574)	SPOUT1 (ENSGALG00010028578)	KYAT1 (ENSGALG00010028582)	LRRC8A (ENSGALG00010028584)	PHYHD1 (ENSGALG00010028589)	DOLK (ENSGALG00010028593)	NUP188 (ENSGALG00010028597)
Japanese quail	MODERN SPECIES	8	FPGS (ENSCJPG00005019938)	CDK9 (ENSCJPG00005019939)	SH2D3C (ENSCJPG00005019940)	TOR2A (ENSCJPG00005019941)	CERCAM (ENSCJPG00005019942)	URM1 (ENSCJPG00005019944)	SLC27A4 (ENSCJPG00005019945)	COQ4 (ENSCJPG00005019947)	TRUB2 (ENSCJPG00005019948)	SWI5 (ENSCJPG00005019949)	ENSCJPG00005019950	DNM1 (ENSCJPG00005019953)	CIZ1 (ENSCJPG00005020095)	BBLN (ENSCJPG00005020096)	PTGES2 (ENSCJPG00005020097)	ODF2 (ENSCJPG00005020098) ##22	GLE1 (ENSCJPG00005020099)	SPTAN1 (ENSCJPG00005020100)	DYNC2I2 (ENSCJPG00005020185)	SET (ENSCJPG00005020186)	ENSCJPG00005020187	ZDHHC12 (ENSCJPG00005020302)	ZER1 (ENSCJPG00005020303)	TBC1D13 (ENSCJPG00005020304)	ENDOG (ENSCJPG00005020305)	SPOUT1 (ENSCJPG00005020306)	KYAT1 (ENSCJPG00005020307)	LRRC8A (ENSCJPG00005020308)	PHYHD1 (ENSCJPG00005020309)	DOLK (ENSCJPG00005020310)	NUP188 (ENSCJPG00005020311)
African ostrich	MODERN SPECIES	971		CDK9 (ENSSCUG00000017193)	SH2D3C (ENSSCUG00000017198)	TOR2A (ENSSCUG00000017206)	ENSSCUG00000017207	ENSSCUG00000017210	SLC27A4 (ENSSCUG00000017212)	COQ4 (ENSSCUG00000017215)	TRUB2 (ENSSCUG00000017217)	SWI5 (ENSSCUG00000017218)	ENSSCUG00000017221	DNM1 (ENSSCUG00000017234)	CIZ1 (ENSSCUG00000017239)	ENSSCUG00000017240	PTGES2 (ENSSCUG00000017242)	ODF2 (ENSSCUG00000017244) ##22	GLE1 (ENSSCUG00000017248)	SPTAN1 (ENSSCUG00000017472)	DYNC2I2 (ENSSCUG00000017765)	SET (ENSSCUG00000017772)	PKN1 (ENSSCUG00000017776)	ZDHHC12 (ENSSCUG00000017778)	ZER1 (ENSSCUG00000017779)	TBC1D13 (ENSSCUG00000017781)	SPOUT1 (ENSSCUG00000017782)	KYAT1 (ENSSCUG00000017783)	LRRC8A (ENSSCUG00000017784)	PHYHD1 (ENSSCUG00000017786)	DOLK (ENSSCUG00000017789)	NUP188 (ENSSCUG00000017791)	SH3GLB2 (ENSSCUG00000017793)
Australian saltwater crocodile	MODERN SPECIES	44	ENSCPRG00005000351	PTRH1 (ENSCPRG00005000359)	CFAP157 (ENSCPRG00005000363)	CERCAM (ENSCPRG00005000369)	URM1 (ENSCPRG00005000380)	SLC27A4 (ENSCPRG00005000384)	COQ4 (ENSCPRG00005000394)	TRUB2 (ENSCPRG00005000402)	SWI5 (ENSCPRG00005000422)	ENSCPRG00005000436	ENSCPRG00005000485	DNM1 (ENSCPRG00005000599)	CIZ1 (ENSCPRG00005000678)	BBLN (ENSCPRG00005000719)	PTGES2 (ENSCPRG00005000726)	ODF2 (ENSCPRG00005000809) ##22	GLE1 (ENSCPRG00005001279)	SPTAN1 (ENSCPRG00005001460)	DYNC2I2 (ENSCPRG00005002223)	SET (ENSCPRG00005002238)	PKN1 (ENSCPRG00005002282)	ZDHHC12 (ENSCPRG00005002358)	ZER1 (ENSCPRG00005002383)	TBC1D13 (ENSCPRG00005002492)	ENDOG (ENSCPRG00005002497)	SPOUT1 (ENSCPRG00005002500)	ENSCPRG00005002509	LRRC8A (ENSCPRG00005002523)	PHYHD1 (ENSCPRG00005002530)	DOLK (ENSCPRG00005002539)	NUP188 (ENSCPRG00005002660)
Cryptodira	ANCESTRAL SPECIES	42	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154382.a.a	ENSGT00530000063936.a	ENSGT00940000163111.a.b.a	ENSGT00390000004692.d.a	ENSGT00940000159684	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT00390000009916	ENSGT00940000166147	ENSGT01030000234559.a.a.b.a
Testudinoidea	ANCESTRAL SPECIES	23	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287
Testudinidae	ANCESTRAL SPECIES	29	ENSGT00950000182888.a.b	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Goode s thornscrub tortoise	MODERN SPECIES	7	TOR2A (ENSGEVG00005019140)	ENSGEVG00005019159	PTRH1 (ENSGEVG00005019167)	CFAP157 (ENSGEVG00005019181)	CERCAM (ENSGEVG00005019227)	URM1 (ENSGEVG00005019344)	SLC27A4 (ENSGEVG00005019353)	COQ4 (ENSGEVG00005019375)	TRUB2 (ENSGEVG00005019393)	SWI5 (ENSGEVG00005019405)	ENSGEVG00005019428	DNM1 (ENSGEVG00005019520)	CIZ1 (ENSGEVG00005019581)	BBLN (ENSGEVG00005019612)	PTGES2 (ENSGEVG00005019626)	ODF2 (ENSGEVG00005019681) ##22	GLE1 (ENSGEVG00005019713)	SPTAN1 (ENSGEVG00005020346)	DYNC2I2 (ENSGEVG00005021064)	SET (ENSGEVG00005021077)	ENSGEVG00005021080	ZDHHC12 (ENSGEVG00005021087)	ZER1 (ENSGEVG00005021100)	TBC1D13 (ENSGEVG00005021107)	SPOUT1 (ENSGEVG00005021111)	KYAT1 (ENSGEVG00005021117)	LRRC8A (ENSGEVG00005021129)	PHYHD1 (ENSGEVG00005021134)	DOLK (ENSGEVG00005021140)	NUP188 (ENSGEVG00005021150)	SH3GLB2 (ENSGEVG00005021173)
Abingdon island giant tortoise	MODERN SPECIES	2008	ENSCABG00000001933	PTRH1 (ENSCABG00000001936)	CFAP157 (ENSCABG00000001937)	CERCAM (ENSCABG00000001939)	URM1 (ENSCABG00000001940)	SLC27A4 (ENSCABG00000001941)	COQ4 (ENSCABG00000002191)	TRUB2 (ENSCABG00000002192)	SWI5 (ENSCABG00000002193)	ENSCABG00000002194	ENSCABG00000002195	DNM1 (ENSCABG00000002197)	CIZ1 (ENSCABG00000002205)	BBLN (ENSCABG00000002208)	PTGES2 (ENSCABG00000002209)	ODF2 (ENSCABG00000002212) ##22	GLE1 (ENSCABG00000002220)	SPTAN1 (ENSCABG00000002222)	DYNC2I2 (ENSCABG00000002237)	SET (ENSCABG00000002240)	ENSCABG00000002242	ZDHHC12 (ENSCABG00000002244)	ZER1 (ENSCABG00000002245)	TBC1D13 (ENSCABG00000002259)	ENDOG (ENSCABG00000002486)	SPOUT1 (ENSCABG00000002494)	KYAT1 (ENSCABG00000002511)	LRRC8A (ENSCABG00000002623)	PHYHD1 (ENSCABG00000002626)	DOLK (ENSCABG00000002676)	NUP188 (ENSCABG00000002715)
Emydidae	ANCESTRAL SPECIES	29	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT01040000244417	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154912	ENSGT00940000154990	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067
painted turtle	MODERN SPECIES	716	ENSCPBG00000025209	PTRH1 (ENSCPBG00000025207)	CFAP157 (ENSCPBG00000025206)	CERCAM (ENSCPBG00000025202)	URM1 (ENSCPBG00000025196)	SLC27A4 (ENSCPBG00000025193)	COQ4 (ENSCPBG00000025188)	TRUB2 (ENSCPBG00000025186)	ENSCPBG00000025183	ENSCPBG00000025180	ENSCPBG00000025176	DNM1 (ENSCPBG00000024671)	CIZ1 (ENSCPBG00000024640)	BBLN (ENSCPBG00000024631)	PTGES2 (ENSCPBG00000024615)	ODF2 (ENSCPBG00000024574) ##22	GLE1 (ENSCPBG00000024524)	SPTAN1 (ENSCPBG00000023766)	DYNC2I2 (ENSCPBG00000023373)	SET (ENSCPBG00000023372)	ENSCPBG00000023369	ENSCPBG00000023366	ZDHHC12 (ENSCPBG00000023365)	ZER1 (ENSCPBG00000023362)	TBC1D13 (ENSCPBG00000023355)	ENDOG (ENSCPBG00000023353)	SPOUT1 (ENSCPBG00000023348)	KYAT1 (ENSCPBG00000023339)	LRRC8A (ENSCPBG00000023338)	PHYHD1 (ENSCPBG00000023333)	DOLK (ENSCPBG00000023330)
Three-toed box turtle	MODERN SPECIES	113	TOR2A (ENSTMTG00000021808)	ENSTMTG00000021815	PTRH1 (ENSTMTG00000021821)	CFAP157 (ENSTMTG00000021826)	CERCAM (ENSTMTG00000021841)	URM1 (ENSTMTG00000021862)	SLC27A4 (ENSTMTG00000021865)	COQ4 (ENSTMTG00000021870)	TRUB2 (ENSTMTG00000021873)	SWI5 (ENSTMTG00000021880)	ENSTMTG00000021893	DNM1 (ENSTMTG00000021927)	CIZ1 (ENSTMTG00000021941)	ENSTMTG00000021946	PTGES2 (ENSTMTG00000021950)	ODF2 (ENSTMTG00000021957) ##22	GLE1 (ENSTMTG00000021986)	SPTAN1 (ENSTMTG00000022042)	DYNC2I2 (ENSTMTG00000022095)	SET (ENSTMTG00000022109)	ENSTMTG00000022132	ZDHHC12 (ENSTMTG00000022146)	ZER1 (ENSTMTG00000022153)	TBC1D13 (ENSTMTG00000022165)	ENDOG (ENSTMTG00000022174)	SPOUT1 (ENSTMTG00000022180)	KYAT1 (ENSTMTG00000022188)	LRRC8A (ENSTMTG00000022195)	PHYHD1 (ENSTMTG00000022202)	DOLK (ENSTMTG00000022214)	ENSTMTG00000022221
Chinese turtle	MODERN SPECIES	764	TOR2A (ENSPSIG00000013585)	TTC16 (ENSPSIG00000013646)	PTRH1 (ENSPSIG00000013828)	CFAP157 (ENSPSIG00000013881)	CERCAM (ENSPSIG00000014033)	URM1 (ENSPSIG00000014442)	SLC27A4 (ENSPSIG00000014465)	COQ4 (ENSPSIG00000015437)	TRUB2 (ENSPSIG00000015701)	SWI5 (ENSPSIG00000016075)	ENSPSIG00000016085	DNM1 (ENSPSIG00000016092)	CIZ1 (ENSPSIG00000017082)	ENSPSIG00000000010	PTGES2 (ENSPSIG00000017553)	ODF2 (ENSPSIG00000017580) ##22	GLE1 (ENSPSIG00000017668)	SPTAN1 (ENSPSIG00000017684)	DYNC2I2 (ENSPSIG00000018054)	SET (ENSPSIG00000018056)	ENSPSIG00000018074	ZDHHC12 (ENSPSIG00000018085)	ZER1 (ENSPSIG00000018118)	TBC1D13 (ENSPSIG00000018124)	ENDOG (ENSPSIG00000018149)	SPOUT1 (ENSPSIG00000018152)	KYAT1 (ENSPSIG00000018153)	LRRC8A (ENSPSIG00000000011)	PHYHD1 (ENSPSIG00000018156)	DOLK (ENSPSIG00000000012)	NUP188 (ENSPSIG00000018163)
Mammalia	ANCESTRAL SPECIES	23	ENSGT00950000182888.a.b	ENSGT00390000004550	ENSGT00390000004247	ENSGT00730000111240	ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000003828	ENSGT00940000156773	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Platypus	MODERN SPECIES	15	SH2D3C (ENSOANG00000007349)	TOR2A (ENSOANG00000040414)	PTRH1 (ENSOANG00000046584)	ENSOANG00000011890	CERCAM (ENSOANG00000011889)	URM1 (ENSOANG00000003949)	SLC27A4 (ENSOANG00000037339)	COQ4 (ENSOANG00000041330)	ENSOANG00000039795	ENSOANG00000015202	ENSOANG00000012097	DNM1 (ENSOANG00000000394)	ENSOANG00000050817	BBLN (ENSOANG00000039985)	PTGES2 (ENSOANG00000048350)	ODF2 (ENSOANG00000008437) ##22	GLE1 (ENSOANG00000011987)	SPTAN1 (ENSOANG00000011986)	DYNC2I2 (ENSOANG00000011985)	SET (ENSOANG00000046546)	PKN3 (ENSOANG00000008094)	ENSOANG00000043658	ZER1 (ENSOANG00000041420)	TBC1D13 (ENSOANG00000044821)	ENDOG (ENSOANG00000038236)	SPOUT1 (ENSOANG00000003336)	KYAT1 (ENSOANG00000003335)	LRRC8A (ENSOANG00000014621)	ENSOANG00000019923	ENSOANG00000050711	ENSOANG00000040329
Theria	ANCESTRAL SPECIES	23	ENSGT00990000204366	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00990000204366	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.f	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00990000204366	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.f	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00990000204366	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.f	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00990000204366	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.f	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Common wonbat	MODERN SPECIES	1030	ENSVURG00010016009	EEIG1 (ENSVURG00010016003)	NAIF1 (ENSVURG00010015999)	SLC25A25 (ENSVURG00010015954)	PTGES2 (ENSVURG00010015939)	ENSVURG00010015931	ENSVURG00010015921	DNM1 (ENSVURG00010015851)	ENSVURG00010015778	ENSVURG00010015756	TRUB2 (ENSVURG00010015748)	COQ4 (ENSVURG00010015627)	SLC27A4 (ENSVURG00010015595)	URM1 (ENSVURG00010015576)	CERCAM (ENSVURG00010015549)	ODF2 (ENSVURG00010014736) ##22	GLE1 (ENSVURG00010014648)	SPTAN1 (ENSVURG00010013542)	DYNC2I2 (ENSVURG00010013437)	SET (ENSVURG00010013422)	PKN3 (ENSVURG00010013394)	ZDHHC12 (ENSVURG00010013384)	ZER1 (ENSVURG00010013363)	TBC1D13 (ENSVURG00010013333)	ENDOG (ENSVURG00010013322)	SPOUT1 (ENSVURG00010013316)	KYAT1 (ENSVURG00010013300)	LRRC8A (ENSVURG00010013287)	PHYHD1 (ENSVURG00010013281)	DOLK (ENSVURG00010013275)	NUP188 (ENSVURG00010013249)
koala	MODERN SPECIES	161	DPM2 (ENSPCIG00000026647)	EEIG1 (ENSPCIG00000026652)	NAIF1 (ENSPCIG00000026658)	SLC25A25 (ENSPCIG00000026662)	PTGES2 (ENSPCIG00000026669)	BBLN (ENSPCIG00000026673)	ENSPCIG00000026674	DNM1 (ENSPCIG00000026678)	ENSPCIG00000026693	ENSPCIG00000035322	TRUB2 (ENSPCIG00000026731)	COQ4 (ENSPCIG00000026733)	SLC27A4 (ENSPCIG00000026784)	ENSPCIG00000026786	CERCAM (ENSPCIG00000026790)	ODF2 (ENSPCIG00000029602) ##22	GLE1 (ENSPCIG00000029781)	SPTAN1 (ENSPCIG00000029892)	DYNC2I2 (ENSPCIG00000030096)	SET (ENSPCIG00000030104)	PKN3 (ENSPCIG00000030107)	ZER1 (ENSPCIG00000030111)	TBC1D13 (ENSPCIG00000030114)	ENDOG (ENSPCIG00000030115)	SPOUT1 (ENSPCIG00000030118)	KYAT1 (ENSPCIG00000030121)	LRRC8A (ENSPCIG00000008130)	ENSPCIG00000030128	DOLK (ENSPCIG00000030139)	NUP188 (ENSPCIG00000030144)	SH3GLB2 (ENSPCIG00000030159)
Wallaby	MODERN SPECIES	4321																ODF2 (ENSMEUG00000014287) ##22	GLE1 (ENSMEUG00000014314)
Tasmanian devil	MODERN SPECIES	1	ST6GALNAC6 (ENSSHAG00000028681)	ST6GALNAC4 (ENSSHAG00000018485)	ENSSHAG00000018505	DPM2 (ENSSHAG00000022334)	EEIG1 (ENSSHAG00000024179)	NAIF1 (ENSSHAG00000026154)	SLC25A25 (ENSSHAG00000027847)	ENSSHAG00000026830	DNM1 (ENSSHAG00000032239)	ENSSHAG00000018703	ENSSHAG00000028584	TRUB2 (ENSSHAG00000021715)	COQ4 (ENSSHAG00000021858)	SLC27A4 (ENSSHAG00000000050)	CERCAM (ENSSHAG00000029760)	ODF2 (ENSSHAG00000018739) ##22	GLE1 (ENSSHAG00000018769)	SPTAN1 (ENSSHAG00000018784)	DYNC2I2 (ENSSHAG00000018803)	SET (ENSSHAG00000018817)	PKN3 (ENSSHAG00000018824)	ZDHHC12 (ENSSHAG00000024938)	ZER1 (ENSSHAG00000018831)	TBC1D13 (ENSSHAG00000029784)	ENDOG (ENSSHAG00000029467)	SPOUT1 (ENSSHAG00000018857)	KYAT1 (ENSSHAG00000018862)	LRRC8A (ENSSHAG00000018882)	PHYHD1 (ENSSHAG00000028077)	NUP188 (ENSSHAG00000024098)	DOLK (ENSSHAG00000018894)
Opossum	MODERN SPECIES		ST6GALNAC4 (ENSMODG00000005649)	DPM2 (ENSMODG00000036505)	EEIG1 (ENSMODG00000005688)	NAIF1 (ENSMODG00000005695)	SLC25A25 (ENSMODG00000005725)	ENSMODG00000005748	ENSMODG00000005754	ENSMODG00000031735	DNM1 (ENSMODG00000005868)	ENSMODG00000005915	TRUB2 (ENSMODG00000005940)	COQ4 (ENSMODG00000005951)	SLC27A4 (ENSMODG00000005970)	URM1 (ENSMODG00000043638)	CERCAM (ENSMODG00000005999)	ODF2 (ENSMODG00000006078) ##22	ENSMODG00000006130	SPTAN1 (ENSMODG00000006252)	DYNC2I2 (ENSMODG00000006276)	SET (ENSMODG00000006342)	ENSMODG00000049700	PKN3 (ENSMODG00000006395)	ZDHHC12 (ENSMODG00000006407)	ZER1 (ENSMODG00000006425)	TBC1D13 (ENSMODG00000006451)	ENDOG (ENSMODG00000006458)	SPOUT1 (ENSMODG00000006461)	KYAT1 (ENSMODG00000047627)	LRRC8A (ENSMODG00000006491)	DOLK (ENSMODG00000023342)	NUP188 (ENSMODG00000006611)
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Atlantogenata	ANCESTRAL SPECIES	47	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987.c	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Xenarthra	ANCESTRAL SPECIES	860																ENSGT00530000063497.a ##22	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A
Armadillo	MODERN SPECIES	3539																ODF2 (ENSDNOG00000002783) ##22	SPTAN1 (ENSDNOG00000002787)	DYNC2I2 (ENSDNOG00000002790)	PKN3 (ENSDNOG00000041810)	ZDHHC12 (ENSDNOG00000017008)	ZER1 (ENSDNOG00000002803)
Sloth	MODERN SPECIES	2957																ODF2 (ENSCHOG00000010048) ##22
Afrotheria	ANCESTRAL SPECIES		ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987.c	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Afrotheria_a	ANCESTRAL SPECIES		ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987.c	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Elephant	MODERN SPECIES	472	DPM2 (ENSLAFG00000025601)	EEIG1 (ENSLAFG00000012074)	NAIF1 (ENSLAFG00000031104)	SLC25A25 (ENSLAFG00000005089)	PTGES2 (ENSLAFG00000005097)	LCN2 (ENSLAFG00000023195)	CIZ1 (ENSLAFG00000005106)	DNM1 (ENSLAFG00000005112)	ENSLAFG00000013576	SWI5 (ENSLAFG00000031443)	TRUB2 (ENSLAFG00000002174)	COQ4 (ENSLAFG00000002176)	SLC27A4 (ENSLAFG00000002177)	URM1 (ENSLAFG00000002178)	CERCAM (ENSLAFG00000022100)	ODF2 (ENSLAFG00000001758) ##22	GLE1 (ENSLAFG00000018612)	SPTAN1 (ENSLAFG00000018614)	DYNC2I2 (ENSLAFG00000018622)	PKN3 (ENSLAFG00000009776)	SET (ENSLAFG00000030310)	ZDHHC12 (ENSLAFG00000028584)	ZER1 (ENSLAFG00000012950)	TBC1D13 (ENSLAFG00000021344)	ENDOG (ENSLAFG00000028267)	SPOUT1 (ENSLAFG00000014778)	KYAT1 (ENSLAFG00000022510)	LRRC8A (ENSLAFG00000018674)	PHYHD1 (ENSLAFG00000031812)	DOLK (ENSLAFG00000027684)	NUP188 (ENSLAFG00000014921)
Hyrax	MODERN SPECIES	2677																ODF2 (ENSPCAG00000009500) ##22
Tenrec	MODERN SPECIES	3276																ODF2 (ENSETEG00000011273) ##22	GLE1 (ENSETEG00000011283)	SPTAN1 (ENSETEG00000011287)	ENSETEG00000011304	ENSETEG00000011307
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Cetacea	ANCESTRAL SPECIES	9	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.c.a.a	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.c.a.a	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Odontoceti_a	ANCESTRAL SPECIES	19	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773.m	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.c.a.a	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773.m	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.c.a.a	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773.m	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.c.a.a	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Beluga whale	MODERN SPECIES	19	DPM2 (ENSDLEG00000013905)	FAM102A (ENSDLEG00000013859)	NAIF1 (ENSDLEG00000013845)	SLC25A25 (ENSDLEG00000013826)	PTGES2 (ENSDLEG00000013811)	LCN2 (ENSDLEG00000013790)	CUNH9orf16 (ENSDLEG00000013764)	CIZ1 (ENSDLEG00000013429)	DNM1 (ENSDLEG00000013341)	ENSDLEG00000013287	ENSDLEG00000013260	TRUB2 (ENSDLEG00000013238)	COQ4 (ENSDLEG00000013223)	SLC27A4 (ENSDLEG00000013192)	CERCAM (ENSDLEG00000013147)	ODF2 (ENSDLEG00000011586) ##22	GLE1 (ENSDLEG00000011434)	SPTAN1 (ENSDLEG00000010997)	DYNC2I2 (ENSDLEG00000010796)	SET (ENSDLEG00000010550)	PKN3 (ENSDLEG00000010355)	ZDHHC12 (ENSDLEG00000010316)	ZER1 (ENSDLEG00000010294)	TBC1D13 (ENSDLEG00000010257)	ENDOG (ENSDLEG00000010240)	SPOUT1 (ENSDLEG00000010049)	KYAT1 (ENSDLEG00000009805)	LRRC8A (ENSDLEG00000009771)	PHYHD1 (ENSDLEG00000009397)	DOLK (ENSDLEG00000009354)	ENSDLEG00000009341
Narwhal	MODERN SPECIES	312	NAIF1 (ENSMMNG00015011360)	SLC25A25 (ENSMMNG00015011401)	PTGES2 (ENSMMNG00015011488)	LCN2 (ENSMMNG00015011512)	BBLN (ENSMMNG00015011539)	CIZ1 (ENSMMNG00015011557)	DNM1 (ENSMMNG00015011636)	ENSMMNG00015011718	ENSMMNG00015011806	ENSMMNG00015011820	COQ4 (ENSMMNG00015011834)	SLC27A4 (ENSMMNG00015011857)	URM1 (ENSMMNG00015011899)	CERCAM (ENSMMNG00015011954)	ENSMMNG00015011989	ODF2 (ENSMMNG00015012074) ##22	GLE1 (ENSMMNG00015012220)	SPTAN1 (ENSMMNG00015012399)	DYNC2I2 (ENSMMNG00015012768)	ENSMMNG00015012809	PKN3 (ENSMMNG00015012862)	ZDHHC12 (ENSMMNG00015012907)	ZER1 (ENSMMNG00015012922)	TBC1D13 (ENSMMNG00015012949)	ENDOG (ENSMMNG00015012965)	SPOUT1 (ENSMMNG00015012974)	KYAT1 (ENSMMNG00015013000)	LRRC8A (ENSMMNG00015013024)	PHYHD1 (ENSMMNG00015013052)	DOLK (ENSMMNG00015013067)	NUP188 (ENSMMNG00015013093)
Vaquita	MODERN SPECIES	17	EEIG1 (ENSPSNG00000009845)	NAIF1 (ENSPSNG00000009796)	SLC25A25 (ENSPSNG00000009629)	PTGES2 (ENSPSNG00000009512)	LCN2 (ENSPSNG00000009350)	ENSPSNG00000019065	CIZ1 (ENSPSNG00000018754)	DNM1 (ENSPSNG00000018580)	ENSPSNG00000018175	SWI5 (ENSPSNG00000018049)	ENSPSNG00000018011	COQ4 (ENSPSNG00000017937)	SLC27A4 (ENSPSNG00000017850)	ENSPSNG00000017825	CERCAM (ENSPSNG00000017524)	ODF2 (ENSPSNG00000016983) ##22	GLE1 (ENSPSNG00000016827)	SPTAN1 (ENSPSNG00000016557)	DYNC2I2 (ENSPSNG00000016254)	ENSPSNG00000016095	PKN3 (ENSPSNG00000016019)	ZDHHC12 (ENSPSNG00000015940)	ZER1 (ENSPSNG00000015866)	TBC1D13 (ENSPSNG00000015769)	ENDOG (ENSPSNG00000015699)	SPOUT1 (ENSPSNG00000015652)	KYAT1 (ENSPSNG00000015552)	LRRC8A (ENSPSNG00000015488)	PHYHD1 (ENSPSNG00000015374)	DOLK (ENSPSNG00000015343)	NUP188 (ENSPSNG00000015265)
Dolphin	MODERN SPECIES	1677															CERCAM (ENSTTRG00000011563)	ODF2 (ENSTTRG00000011574) ##22	GLE1 (ENSTTRG00000011590)	SPTAN1 (ENSTTRG00000011598)	DYNC2I2 (ENSTTRG00000011604)	SET (ENSTTRG00000011605)	PKN3 (ENSTTRG00000011606)	ZDHHC12 (ENSTTRG00000011607)	ZER1 (ENSTTRG00000011609)	TBC1D13 (ENSTTRG00000011612)	ENDOG (ENSTTRG00000011615)	SPOUT1 (ENSTTRG00000011616)	KYAT1 (ENSTTRG00000011617)	LRRC8A (ENSTTRG00000011618)	PHYHD1 (ENSTTRG00000011619)	NUP188 (ENSTTRG00000011621)	SH3GLB2 (ENSTTRG00000011622)
Sperm whale	MODERN SPECIES	4													ENSPCTG00005015500	ENSPCTG00005015205	CERCAM (ENSPCTG00005015104)	ODF2 (ENSPCTG00005013770) ##22	GLE1 (ENSPCTG00005013616)	SPTAN1 (ENSPCTG00005013226)	DYNC2I2 (ENSPCTG00005013123)	ENSPCTG00005012830	PKN3 (ENSPCTG00005012722)	ZDHHC12 (ENSPCTG00005012644)	ZER1 (ENSPCTG00005012475)	TBC1D13 (ENSPCTG00005012385)	ENDOG (ENSPCTG00005012355)	SPOUT1 (ENSPCTG00005012201)	KYAT1 (ENSPCTG00005012112)	LRRC8A (ENSPCTG00005012078)	PHYHD1 (ENSPCTG00005012022)	DOLK (ENSPCTG00005011997)	NUP188 (ENSPCTG00005011563)
Blue whale	MODERN SPECIES	17	NAIF1 (ENSBMSG00010004625)	SLC25A25 (ENSBMSG00010004676)	PTGES2 (ENSBMSG00010004846)	ENSBMSG00010004862	BBLN (ENSBMSG00010004875)	CIZ1 (ENSBMSG00010004882)	DNM1 (ENSBMSG00010014083)	ENSBMSG00010016019	ENSBMSG00010016102	SWI5 (ENSBMSG00010016121)	TRUB2 (ENSBMSG00010016144)	COQ4 (ENSBMSG00010016174)	SLC27A4 (ENSBMSG00010016233)	ENSBMSG00010016284	CERCAM (ENSBMSG00010016352)	ODF2 (ENSBMSG00010016555) ##22	GLE1 (ENSBMSG00010016573)	SPTAN1 (ENSBMSG00010016675)	DYNC2I2 (ENSBMSG00010016989)	ENSBMSG00010017098	PKN3 (ENSBMSG00010017783)	ZDHHC12 (ENSBMSG00010017813)	ZER1 (ENSBMSG00010017848)	TBC1D13 (ENSBMSG00010017884)	ENDOG (ENSBMSG00010017915)	SPOUT1 (ENSBMSG00010017933)	KYAT1 (ENSBMSG00010017962)	LRRC8A (ENSBMSG00010018009)	PHYHD1 (ENSBMSG00010018043)	DOLK (ENSBMSG00010018209)	NUP188 (ENSBMSG00010018236)
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.f	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Percora_a	ANCESTRAL SPECIES	27	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.f	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.f	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Caprinae	ANCESTRAL SPECIES	27	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773.l	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.f	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Rambouillet Sheep	MODERN SPECIES	19	EEIG1 (ENSOARG00020015117)	NAIF1 (ENSOARG00020015076)	SLC25A25 (ENSOARG00020014113)	PTGES2 (ENSOARG00020014029)	LCN2 (ENSOARG00020013978)	BBLN (ENSOARG00020013944)	CIZ1 (ENSOARG00020013788)	DNM1 (ENSOARG00020009439)	ENSOARG00020008954	SWI5 (ENSOARG00020008915)	ENSOARG00020008848	COQ4 (ENSOARG00020008764)	SLC27A4 (ENSOARG00020008697)	URM1 (ENSOARG00020008585)	CERCAM (ENSOARG00020008484)	ODF2 (ENSOARG00020007738) ##22	GLE1 (ENSOARG00020007574)	SPTAN1 (ENSOARG00020003920)	DYNC2I2 (ENSOARG00020003701)	ENSOARG00020003552	PKN3 (ENSOARG00020003449)	ZDHHC12 (ENSOARG00020003413)	ZER1 (ENSOARG00020003376)	TBC1D13 (ENSOARG00020003183)	ENDOG (ENSOARG00020003159)	SPOUT1 (ENSOARG00020003141)	ENSOARG00020003083	ENSOARG00020003005	ENSOARG00020002857	ENSOARG00020002784	LRRC8A (ENSOARG00020002765)
Goat	MODERN SPECIES	2	EEIG1 (ENSCHIG00000027017)	NAIF1 (ENSCHIG00000013390)	SLC25A25 (ENSCHIG00000021566)	PTGES2 (ENSCHIG00000026833)	LCN2 (ENSCHIG00000021337)	BBLN (ENSCHIG00000011939)	CIZ1 (ENSCHIG00000006845)	DNM1 (ENSCHIG00000018297)	ENSCHIG00000008218	ENSCHIG00000018627	TRUB2 (ENSCHIG00000021160)	COQ4 (ENSCHIG00000011631)	SLC27A4 (ENSCHIG00000026484)	URM1 (ENSCHIG00000012547)	CERCAM (ENSCHIG00000023833)	ODF2 (ENSCHIG00000009088) ##22	GLE1 (ENSCHIG00000025665)	SPTAN1 (ENSCHIG00000013404)	DYNC2I2 (ENSCHIG00000019844)	SET (ENSCHIG00000027039)	PKN3 (ENSCHIG00000018757)	ZDHHC12 (ENSCHIG00000026386)	ZER1 (ENSCHIG00000024803)	TBC1D13 (ENSCHIG00000013669)	ENDOG (ENSCHIG00000020781)	SPOUT1 (ENSCHIG00000010025)	KYAT1 (ENSCHIG00000015959)	LRRC8A (ENSCHIG00000003097)	PHYHD1 (ENSCHIG00000025025)	DOLK (ENSCHIG00000013790)	NUP188 (ENSCHIG00000017195)
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.f.c.a.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Bos	ANCESTRAL SPECIES	5	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.f.c.a.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Bos_b	ANCESTRAL SPECIES	16	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.f.d	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Hybrid Bos Indicus	MODERN SPECIES	2	EEIG1 (ENSBIXG00005015589)	NAIF1 (ENSBIXG00005002340)	SLC25A25 (ENSBIXG00005015545)	PTGES2 (ENSBIXG00005015481)	LCN2 (ENSBIXG00005015458)	BBLN (ENSBIXG00005015446)	CIZ1 (ENSBIXG00005002265)	DNM1 (ENSBIXG00005015308)	ENSBIXG00005015206	SWI5 (ENSBIXG00005015152)	TRUB2 (ENSBIXG00005015125)	COQ4 (ENSBIXG00005015105)	SLC27A4 (ENSBIXG00005015088)	URM1 (ENSBIXG00005015065)	CERCAM (ENSBIXG00005002208)	ODF2 (ENSBIXG00005014960) ##22	GLE1 (ENSBIXG00005014682)	SPTAN1 (ENSBIXG00005006741)	DYNC2I2 (ENSBIXG00005014302)	ENSBIXG00005014268	PKN3 (ENSBIXG00005014132)	ZDHHC12 (ENSBIXG00005014111)	ZER1 (ENSBIXG00005007117)	TBC1D13 (ENSBIXG00005001821)	ENDOG (ENSBIXG00005014033)	SPOUT1 (ENSBIXG00005014021)	ENSBIXG00005013976	ENSBIXG00005013947	LRRC8A (ENSBIXG00005001742)	PHYHD1 (ENSBIXG00005013866)	DOLK (ENSBIXG00005013832)
Cow	MODERN SPECIES	2	SLC25A25 (ENSBTAG00000011912)	ENSBTAG00000049313	PTGES2 (ENSBTAG00000016218)	LCN2 (ENSBTAG00000014149)	BBLN (ENSBTAG00000014150)	CIZ1 (ENSBTAG00000012274)	DNM1 (ENSBTAG00000011307)	GOLGA2 (ENSBTAG00000011317)	ENSBTAG00000030608	ENSBTAG00000055269	TRUB2 (ENSBTAG00000004663)	COQ4 (ENSBTAG00000004664)	SLC27A4 (ENSBTAG00000015436)	URM1 (ENSBTAG00000025612)	CERCAM (ENSBTAG00000038139)	ODF2 (ENSBTAG00000030567) ##22	GLE1 (ENSBTAG00000030566)	SPTAN1 (ENSBTAG00000015327)	DYNC2I2 (ENSBTAG00000015343)	SET (ENSBTAG00000020959)	PKN3 (ENSBTAG00000010195)	ZDHHC12 (ENSBTAG00000030540)	ZER1 (ENSBTAG00000010208)	TBC1D13 (ENSBTAG00000012480)	ENDOG (ENSBTAG00000012484)	SPOUT1 (ENSBTAG00000012485)	KYAT1 (ENSBTAG00000036101)	ENSBTAG00000036099	LRRC8A (ENSBTAG00000013030)	PHYHD1 (ENSBTAG00000038831)	DOLK (ENSBTAG00000010601)
Bos_a	ANCESTRAL SPECIES	23	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00900000143058	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.f.c.a.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00960000192839.b	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067
Domestic yak	MODERN SPECIES	28	EEIG1 (ENSBGRG00000008097)	NAIF1 (ENSBGRG00000008219)	SLC25A25 (ENSBGRG00000008276)	PTGES2 (ENSBGRG00000008923)	LCN2 (ENSBGRG00000008966)	BBLN (ENSBGRG00000009004)	DNM1 (ENSBGRG00000009415)	ENSBGRG00000009764	SWI5 (ENSBGRG00000010054)	TRUB2 (ENSBGRG00000010103)	COQ4 (ENSBGRG00000010175)	ENSBGRG00000010210	ENSBGRG00000010236	ENSBGRG00000010276	CERCAM (ENSBGRG00000010359)	ODF2 (ENSBGRG00000010746) ##22	GLE1 (ENSBGRG00000011941)	SPTAN1 (ENSBGRG00000012175)	DYNC2I2 (ENSBGRG00000013534)	ENSBGRG00000013648	PKN3 (ENSBGRG00000014325)	ZDHHC12 (ENSBGRG00000014417)	ZER1 (ENSBGRG00000014532)	TBC1D13 (ENSBGRG00000014747)	ENDOG (ENSBGRG00000015041)	SPOUT1 (ENSBGRG00000015119)	KYAT1 (ENSBGRG00000015519)	ENSBGRG00000015866	ENSBGRG00000015915	LRRC8A (ENSBGRG00000015966)	PHYHD1 (ENSBGRG00000016017)
Wild yak	MODERN SPECIES	2257	EEIG1 (ENSBMUG00000019254)	NAIF1 (ENSBMUG00000019278)	SLC25A25 (ENSBMUG00000019354)	PTGES2 (ENSBMUG00000019395)	LCN2 (ENSBMUG00000019409)	ENSBMUG00000019426	CIZ1 (ENSBMUG00000019488)	DNM1 (ENSBMUG00000019849)	ENSBMUG00000020249	SWI5 (ENSBMUG00000020300)	TRUB2 (ENSBMUG00000020324)	COQ4 (ENSBMUG00000020335)	SLC27A4 (ENSBMUG00000020352)	URM1 (ENSBMUG00000020356)	CERCAM (ENSBMUG00000020401)	ODF2 (ENSBMUG00000020574) ##22	GLE1 (ENSBMUG00000020729)	SPTAN1 (ENSBMUG00000021166)	DYNC2I2 (ENSBMUG00000021287)	ENSBMUG00000021332	PKN3 (ENSBMUG00000021397)	ZDHHC12 (ENSBMUG00000021414)	ZER1 (ENSBMUG00000021439)	TBC1D13 (ENSBMUG00000021470)	ENDOG (ENSBMUG00000021487)	SPOUT1 (ENSBMUG00000021496)
American bison	MODERN SPECIES	3289	EEIG1 (ENSBBBG00000021144)	NAIF1 (ENSBBBG00000021151)	SLC25A25 (ENSBBBG00000021282)	PTGES2 (ENSBBBG00000021308)	LCN2 (ENSBBBG00000021319)	BBLN (ENSBBBG00000021329)	CIZ1 (ENSBBBG00000021514)	DNM1 (ENSBBBG00000022097)	ENSBBBG00000005857	SWI5 (ENSBBBG00000022225)	TRUB2 (ENSBBBG00000007202)	COQ4 (ENSBBBG00000022263)	SLC27A4 (ENSBBBG00000022292)	URM1 (ENSBBBG00000005877)	CERCAM (ENSBBBG00000022348)	ODF2 (ENSBBBG00000023015) ##22	GLE1 (ENSBBBG00000023114)	SPTAN1 (ENSBBBG00000023772)	DYNC2I2 (ENSBBBG00000023833)	ENSBBBG00000023873	PKN3 (ENSBBBG00000023895)	ZDHHC12 (ENSBBBG00000023918)	ZER1 (ENSBBBG00000008636)	TBC1D13 (ENSBBBG00000008976)	ENDOG (ENSBBBG00000024001)	ENSBBBG00000024012	KYAT1 (ENSBBBG00000024044)	LRRC8A (ENSBBBG00000024057)	PHYHD1 (ENSBBBG00000024125)	DOLK (ENSBBBG00000024142)	NUP188 (ENSBBBG00000024205)
Siberian musk deer	MODERN SPECIES	1178	NAIF1 (ENSMMSG00000021305)	SLC25A25 (ENSMMSG00000021344)	PTGES2 (ENSMMSG00000021443)	LCN2 (ENSMMSG00000021462)	BBLN (ENSMMSG00000021473)	CIZ1 (ENSMMSG00000021494)	DNM1 (ENSMMSG00000021591)	ENSMMSG00000021790	SWI5 (ENSMMSG00000021995)	ENSMMSG00000022010	TRUB2 (ENSMMSG00000022019)	COQ4 (ENSMMSG00000022044)	SLC27A4 (ENSMMSG00000022071)	ENSMMSG00000022109	CERCAM (ENSMMSG00000022138)	ODF2 (ENSMMSG00000022206) ##22	GLE1 (ENSMMSG00000022500)	SPTAN1 (ENSMMSG00000022626)	DYNC2I2 (ENSMMSG00000022692)	SET (ENSMMSG00000022708)	ENSMMSG00000022721	PKN3 (ENSMMSG00000022736)	ZDHHC12 (ENSMMSG00000004629)	ZER1 (ENSMMSG00000004684)	TBC1D13 (ENSMMSG00000004774)	ENDOG (ENSMMSG00000004878)	SPOUT1 (ENSMMSG00000004947)	KYAT1 (ENSMMSG00000005035)	LRRC8A (ENSMMSG00000005081)	NUP188 (ENSMMSG00000005172)	DOLK (ENSMMSG00000005645)
Yarkand deer	MODERN SPECIES	2	NAIF1 (ENSCHYG00000019806)	SLC25A25 (ENSCHYG00000019866)	PTGES2 (ENSCHYG00000020542)	ENSCHYG00000020615	CIZ1 (ENSCHYG00000020788)	BBLN (ENSCHYG00000021688)	DNM1 (ENSCHYG00000021822)	ENSCHYG00000024089	SWI5 (ENSCHYG00000026349)	ENSCHYG00000004383	TRUB2 (ENSCHYG00000004541)	COQ4 (ENSCHYG00000004830)	SLC27A4 (ENSCHYG00000004848)	URM1 (ENSCHYG00000004897)	CERCAM (ENSCHYG00000004937)	ODF2 (ENSCHYG00000005210) ##22	GLE1 (ENSCHYG00000006491)	SPTAN1 (ENSCHYG00000006836)	DYNC2I2 (ENSCHYG00000010542)	PKN3 (ENSCHYG00000010695)	ZDHHC12 (ENSCHYG00000010984)	ZER1 (ENSCHYG00000011062)	TBC1D13 (ENSCHYG00000011188)	ENDOG (ENSCHYG00000011462)	SPOUT1 (ENSCHYG00000011505)	KYAT1 (ENSCHYG00000011630)	LRRC8A (ENSCHYG00000011822)	PHYHD1 (ENSCHYG00000011859)	DOLK (ENSCHYG00000012107)	NUP188 (ENSCHYG00000012137)	SH3GLB2 (ENSCHYG00000012467)
Camelidae	ANCESTRAL SPECIES	5	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000156902	ENSGT00940000161818	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Arabian camel	MODERN SPECIES	30	NAIF1 (ENSCDRG00005011787)	SLC25A25 (ENSCDRG00005010833)	PTGES2 (ENSCDRG00005010746)	LCN2 (ENSCDRG00005010668)	BBLN (ENSCDRG00005010632)	CIZ1 (ENSCDRG00005010347)	DNM1 (ENSCDRG00005009936)	ENSCDRG00005008955	SWI5 (ENSCDRG00005008734)	ENSCDRG00005008625	TRUB2 (ENSCDRG00005008567)	COQ4 (ENSCDRG00005008522)	SLC27A4 (ENSCDRG00005008493)	URM1 (ENSCDRG00005008372)	CERCAM (ENSCDRG00005008140)	ODF2 (ENSCDRG00005004342) ##22	CYCS (ENSCDRG00005004156)	GLE1 (ENSCDRG00005004027)	SPTAN1 (ENSCDRG00005002078)	DYNC2I2 (ENSCDRG00005001966)	SET (ENSCDRG00005001835)	PKN3 (ENSCDRG00005001760)	ZDHHC12 (ENSCDRG00005001723)	ZER1 (ENSCDRG00005001674)	TBC1D13 (ENSCDRG00005001632)	ENDOG (ENSCDRG00005001612)	SPOUT1 (ENSCDRG00005001575)	KYAT1 (ENSCDRG00005001537)	LRRC8A (ENSCDRG00005001521)	PHYHD1 (ENSCDRG00005001492)	DOLK (ENSCDRG00005001463)
Suina	ANCESTRAL SPECIES	37	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Chacoan peccary	MODERN SPECIES	887	EEIG1 (ENSCWAG00000018271)	NAIF1 (ENSCWAG00000018246)	SLC25A25 (ENSCWAG00000017935)	PTGES2 (ENSCWAG00000017870)	LCN2 (ENSCWAG00000017836)	BBLN (ENSCWAG00000017811)	CIZ1 (ENSCWAG00000017779)	DNM1 (ENSCWAG00000017617)	ENSCWAG00000017348	SWI5 (ENSCWAG00000017288)	TRUB2 (ENSCWAG00000017252)	COQ4 (ENSCWAG00000017217)	SLC27A4 (ENSCWAG00000017166)	URM1 (ENSCWAG00000017111)	CERCAM (ENSCWAG00000017024)	ODF2 (ENSCWAG00000015659) ##22	GLE1 (ENSCWAG00000015416)	SPTAN1 (ENSCWAG00000011579)	DYNC2I2 (ENSCWAG00000011266)	ENSCWAG00000011134	PKN3 (ENSCWAG00000010948)	ZDHHC12 (ENSCWAG00000010885)	ZER1 (ENSCWAG00000010856)	TBC1D13 (ENSCWAG00000010779)	ENDOG (ENSCWAG00000010746)	SPOUT1 (ENSCWAG00000010709)	KYAT1 (ENSCWAG00000010560)	LRRC8A (ENSCWAG00000010522)	PHYHD1 (ENSCWAG00000010444)	DOLK (ENSCWAG00000010424)	NUP188 (ENSCWAG00000010345)
Pig	MODERN SPECIES		DPM2 (ENSSSCG00000032481)	EEIG1 (ENSSSCG00000005631)	SLC25A25 (ENSSSCG00000005636)	PTGES2 (ENSSSCG00000022655)	LCN2 (ENSSSCG00000005638)	ENSSSCG00000022295	CIZ1 (ENSSSCG00000005640)	DNM1 (ENSSSCG00000005641)	ENSSSCG00000005643	SWI5 (ENSSSCG00000032748)	TRUB2 (ENSSSCG00000005645)	COQ4 (ENSSSCG00000005646)	SLC27A4 (ENSSSCG00000005648)	URM1 (ENSSSCG00000005649)	CERCAM (ENSSSCG00000005650)	ODF2 (ENSSSCG00000005651) ##22	GLE1 (ENSSSCG00000005652)	SPTAN1 (ENSSSCG00000005654)	DYNC2I2 (ENSSSCG00000005655)	ENSSSCG00000005656	PKN3 (ENSSSCG00000005657)	ZDHHC12 (ENSSSCG00000063201)	ZER1 (ENSSSCG00000005659)	TBC1D13 (ENSSSCG00000005660)	ENDOG (ENSSSCG00000005661)	SPOUT1 (ENSSSCG00000005662)	KYAT1 (ENSSSCG00000005663)	LRRC8A (ENSSSCG00000005664)	PHYHD1 (ENSSSCG00000005665)	DOLK (ENSSSCG00000005666)	NUP188 (ENSSSCG00000005667)
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Carnivora	ANCESTRAL SPECIES	18	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Caniformia	ANCESTRAL SPECIES	16	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214.b	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Caniformia_b	ANCESTRAL SPECIES	12	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214.b	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891.e.a	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Ursidae	ANCESTRAL SPECIES	6	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214.b	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891.e.a	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Ursus	ANCESTRAL SPECIES	15	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214.b	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891.e.a	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Polar bear	MODERN SPECIES	214	EEIG1 (ENSUMAG00000022736)	NAIF1 (ENSUMAG00000022734)	SLC25A25 (ENSUMAG00000022731)	PTGES2 (ENSUMAG00000022728)	LCN2 (ENSUMAG00000022726)	ENSUMAG00000022724	CIZ1 (ENSUMAG00000022712)	DNM1 (ENSUMAG00000022221)	ENSUMAG00000022056	SWI5 (ENSUMAG00000022052)	TRUB2 (ENSUMAG00000022051)	COQ4 (ENSUMAG00000022047)	SLC27A4 (ENSUMAG00000022037)	URM1 (ENSUMAG00000022029)	CERCAM (ENSUMAG00000021989)	ODF2 (ENSUMAG00000021970) ##22	GLE1 (ENSUMAG00000021966)	SPTAN1 (ENSUMAG00000021103)	DYNC2I2 (ENSUMAG00000020934)	SETSIP (ENSUMAG00000020906)	PKN3 (ENSUMAG00000020842)	ZDHHC12 (ENSUMAG00000020825)	ZER1 (ENSUMAG00000020644)	TBC1D13 (ENSUMAG00000020633)	SPOUT1 (ENSUMAG00000020628)	KYAT1 (ENSUMAG00000020623)	LRRC8A (ENSUMAG00000020617)	PHYHD1 (ENSUMAG00000020615)	DOLK (ENSUMAG00000020613)	ENSUMAG00000020594	SH3GLB2 (ENSUMAG00000020378)
American black bear	MODERN SPECIES	1480																ODF2 (ENSUAMG00000019173) ##22	GLE1 (ENSUAMG00000019282)
Giant Panda	MODERN SPECIES	17	EEIG1 (ENSAMEG00000015204)	NAIF1 (ENSAMEG00000015231)	SLC25A25 (ENSAMEG00000030211)	PTGES2 (ENSAMEG00000015234)	LCN2 (ENSAMEG00000015256)	BBLN (ENSAMEG00000015254)	CIZ1 (ENSAMEG00000015276)	DNM1 (ENSAMEG00000015306)	ENSAMEG00000015345	ENSAMEG00000015272	TRUB2 (ENSAMEG00000027773)	COQ4 (ENSAMEG00000015413)	SLC27A4 (ENSAMEG00000015422)	ENSAMEG00000015446	CERCAM (ENSAMEG00000015451)	ODF2 (ENSAMEG00000015487) ##22	GLE1 (ENSAMEG00000015537)	SPTAN1 (ENSAMEG00000015563)	DYNC2I2 (ENSAMEG00000015673)	ENSAMEG00000015686	PKN3 (ENSAMEG00000015712)	ENSAMEG00000015755	ZER1 (ENSAMEG00000015759)	TBC1D13 (ENSAMEG00000023701)	SPOUT1 (ENSAMEG00000015808)	KYAT1 (ENSAMEG00000015821)	LRRC8A (ENSAMEG00000015843)	PHYHD1 (ENSAMEG00000015846)	DOLK (ENSAMEG00000019109)	NUP188 (ENSAMEG00000015857)	SH3GLB2 (ENSAMEG00000015905)
Mustelinae	ANCESTRAL SPECIES	12	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214.b	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
American mink	MODERN SPECIES	182	EEIG1 (ENSNVIG00000010779)	NAIF1 (ENSNVIG00000010803)	SLC25A25 (ENSNVIG00000010817)	PTGES2 (ENSNVIG00000010932)	LCN2 (ENSNVIG00000010965)	BBLN (ENSNVIG00000010986)	CIZ1 (ENSNVIG00000010993)	DNM1 (ENSNVIG00000011099)	ENSNVIG00000011157	SWI5 (ENSNVIG00000011167)	TRUB2 (ENSNVIG00000011171)	COQ4 (ENSNVIG00000011182)	SLC27A4 (ENSNVIG00000011209)	URM1 (ENSNVIG00000011267)	CERCAM (ENSNVIG00000011292)	ODF2 (ENSNVIG00000011382) ##22	GLE1 (ENSNVIG00000012432)	SPTAN1 (ENSNVIG00000012859)	DYNC2I2 (ENSNVIG00000014869)	ENSNVIG00000014949	PKN3 (ENSNVIG00000015008)	ZDHHC12 (ENSNVIG00000015192)	ZER1 (ENSNVIG00000015266)	TBC1D13 (ENSNVIG00000015384)	ENDOG (ENSNVIG00000015703)	SPOUT1 (ENSNVIG00000015760)	KYAT1 (ENSNVIG00000015951)	LRRC8A (ENSNVIG00000016088)	PHYHD1 (ENSNVIG00000016113)	DOLK (ENSNVIG00000016204)	NUP188 (ENSNVIG00000016213)
Ferret	MODERN SPECIES	218	PIP5KL1 (ENSMPUG00000013531)	DPM2 (ENSMPUG00000013522)	EEIG1 (ENSMPUG00000013517)	NAIF1 (ENSMPUG00000013510)	SLC25A25 (ENSMPUG00000013468)	PTGES2 (ENSMPUG00000013464)	LCN2 (ENSMPUG00000013458)	CIZ1 (ENSMPUG00000013449)	DNM1 (ENSMPUG00000013224)	ENSMPUG00000013211	TRUB2 (ENSMPUG00000013206)	COQ4 (ENSMPUG00000013201)	SLC27A4 (ENSMPUG00000013194)	URM1 (ENSMPUG00000013184)	CERCAM (ENSMPUG00000013176)	ODF2 (ENSMPUG00000013167) ##22	GLE1 (ENSMPUG00000013164)	SPTAN1 (ENSMPUG00000013143)	DYNC2I2 (ENSMPUG00000013139)	ENSMPUG00000013069	PKN3 (ENSMPUG00000013051)	ZDHHC12 (ENSMPUG00000013061)	ZER1 (ENSMPUG00000013041)	TBC1D13 (ENSMPUG00000013034)	ENDOG (ENSMPUG00000013024)	SPOUT1 (ENSMPUG00000013017)	KYAT1 (ENSMPUG00000013007)	LRRC8A (ENSMPUG00000012999)	DOLK (ENSMPUG00000019223)	NUP188 (ENSMPUG00000012985)	SH3GLB2 (ENSMPUG00000012981)
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214.b	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000157207	ENSGT00390000000224	ENSGT00390000012138.a.b.t.bb.a.b	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214.b	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00390000007640.b.e.b	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Dog	MODERN SPECIES	37	ENSCAFG00845005153	PTGES2 (ENSCAFG00845029789)	ENSCAFG00845029780	LCN2 (ENSCAFG00845029755)	C9H9orf16 (ENSCAFG00845029737)	CIZ1 (ENSCAFG00845029626)	DNM1 (ENSCAFG00845029334)	ENSCAFG00845029221	SWI5 (ENSCAFG00845029128)	TRUB2 (ENSCAFG00845029098)	COQ4 (ENSCAFG00845029077)	SLC27A4 (ENSCAFG00845029005)	URM1 (ENSCAFG00845028967)	CERCAM (ENSCAFG00845028899)	ENSCAFG00845028880	ODF2 (ENSCAFG00845028383) ##22	GLE1 (ENSCAFG00845028068)	SPTAN1 (ENSCAFG00845027492)	DYNC2I2 (ENSCAFG00845027324)	SET (ENSCAFG00845026963)	PKN3 (ENSCAFG00845026684)	ZDHHC12 (ENSCAFG00845026605)	ZER1 (ENSCAFG00845026245)	TBC1D13 (ENSCAFG00845026099)	ENDOG (ENSCAFG00845026038)	SPOUT1 (ENSCAFG00845025964)	KYAT1 (ENSCAFG00845025617)	LRRC8A (ENSCAFG00845025448)	PHYHD1 (ENSCAFG00845025344)	DOLK (ENSCAFG00845025311)	NUP188 (ENSCAFG00845025077)
Dingo	MODERN SPECIES	327	NAIF1 (ENSCAFG00020015805)	SLC25A25 (ENSCAFG00020015817)	PTGES2 (ENSCAFG00020016101)	ENSCAFG00020016102	LCN2 (ENSCAFG00020016105)	BBLN (ENSCAFG00020016109)	CIZ1 (ENSCAFG00020016118)	DNM1 (ENSCAFG00020016259)	ENSCAFG00020017105	ENSCAFG00020017306	ENSCAFG00020017325	COQ4 (ENSCAFG00020017329)	SLC27A4 (ENSCAFG00020017369)	CERCAM (ENSCAFG00020018260)	ENSCAFG00020018866	ODF2 (ENSCAFG00020018928) ##22	GLE1 (ENSCAFG00020019679)	SPTAN1 (ENSCAFG00020020094)	DYNC2I2 (ENSCAFG00020022810)	SET (ENSCAFG00020022819)	PKN3 (ENSCAFG00020022824)	ZDHHC12 (ENSCAFG00020022850)	ZER1 (ENSCAFG00020022864)	TBC1D13 (ENSCAFG00020022951)	ENDOG (ENSCAFG00020022974)	SPOUT1 (ENSCAFG00020022980)	KYAT1 (ENSCAFG00020022992)	LRRC8A (ENSCAFG00020022997)	PHYHD1 (ENSCAFG00020023006)	DOLK (ENSCAFG00020023027)	NUP188 (ENSCAFG00020023102)
Red fox	MODERN SPECIES	77	NAIF1 (ENSVVUG00000013368)	SLC25A25 (ENSVVUG00000013373)	PTGES2 (ENSVVUG00000013383)	ENSVVUG00000013385	LCN2 (ENSVVUG00000013386)	CUNH9orf16 (ENSVVUG00000013397)	CIZ1 (ENSVVUG00000013406)	DNM1 (ENSVVUG00000013412)	GOLGA2 (ENSVVUG00000013422)	SWI5 (ENSVVUG00000013444)	TRUB2 (ENSVVUG00000013451)	COQ4 (ENSVVUG00000013455)	SLC27A4 (ENSVVUG00000013463)	CERCAM (ENSVVUG00000013477)	ENSVVUG00000013489	ODF2 (ENSVVUG00000013549) ##22	GLE1 (ENSVVUG00000015799)	ENSVVUG00000015936	SPTAN1 (ENSVVUG00000016542)	DYNC2I2 (ENSVVUG00000025620)	SET (ENSVVUG00000025637)	PKN3 (ENSVVUG00000025667)	ZDHHC12 (ENSVVUG00000025833)	ZER1 (ENSVVUG00000025838)	TBC1D13 (ENSVVUG00000025967)	ENDOG (ENSVVUG00000025998)	SPOUT1 (ENSVVUG00000025999)	KYAT1 (ENSVVUG00000026017)	LRRC8A (ENSVVUG00000026053)	PHYHD1 (ENSVVUG00000026059)	DOLK (ENSVVUG00000026142)
Felidae	ANCESTRAL SPECIES	16	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a.f	ENSGT01050000244868.b.a.e.a.a	ENSGT01050000244868.b.a.e.b	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Panthera	ANCESTRAL SPECIES	11	ENSGT01050000244868.b.a.e.a.a.a.a	ENSGT01050000244868.b.a.e.a.a.b	ENSGT01050000244868.b.a.e.a.a.a.b	ENSGT01050000244868.b.a.e.a.b	ENSGT01050000244868.b.a.e.b	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Panthera_a	ANCESTRAL SPECIES	10	ENSGT01050000244868.b.a.e.a.a.a.a	ENSGT01050000244868.b.a.e.a.a.b	ENSGT01050000244868.b.a.e.a.a.a.b	ENSGT01050000244868.b.a.e.a.b	ENSGT01050000244868.b.a.e.b	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
leopard	MODERN SPECIES	83	ENSPPRG00000008547	ENSPPRG00000009218	ENSPPRG00000009576	ENSPPRG00000010425	ENSPPRG00000010894	BBLN (ENSPPRG00000011170)	CIZ1 (ENSPPRG00000012431)	DNM1 (ENSPPRG00000000597)	ENSPPRG00000004830	SWI5 (ENSPPRG00000005956)	TRUB2 (ENSPPRG00000006307)	COQ4 (ENSPPRG00000006989)	SLC27A4 (ENSPPRG00000007665)	URM1 (ENSPPRG00000008861)	CERCAM (ENSPPRG00000010198)	ODF2 (ENSPPRG00000012731) ##22	GLE1 (ENSPPRG00000014293)	SPTAN1 (ENSPPRG00000006708)	DYNC2I2 (ENSPPRG00000007430)	ENSPPRG00000010201	PKN3 (ENSPPRG00000011344)	ZDHHC12 (ENSPPRG00000012454)	ZER1 (ENSPPRG00000012995)	TBC1D13 (ENSPPRG00000013950)	ENDOG (ENSPPRG00000014165)	SPOUT1 (ENSPPRG00000014948)	KYAT1 (ENSPPRG00000019755)	LRRC8A (ENSPPRG00000021778)	PHYHD1 (ENSPPRG00000024842)	ENSPPRG00000021639	ENSPPRG00000021650
lion	MODERN SPECIES	13	PTGES2 (ENSPLOG00000018377)	ENSPLOG00000018312	ENSPLOG00000018260	ENSPLOG00000018174	ENSPLOG00000018093	BBLN (ENSPLOG00000018021)	CIZ1 (ENSPLOG00000017906)	DNM1 (ENSPLOG00000017785)	ENSPLOG00000017617	SWI5 (ENSPLOG00000017458)	TRUB2 (ENSPLOG00000017418)	COQ4 (ENSPLOG00000017268)	SLC27A4 (ENSPLOG00000017079)	URM1 (ENSPLOG00000016902)	CERCAM (ENSPLOG00000016593)	ODF2 (ENSPLOG00000016192) ##22	ENSPLOG00000016059	GLE1 (ENSPLOG00000016013)	SPTAN1 (ENSPLOG00000015660)	DYNC2I2 (ENSPLOG00000015434)	SET (ENSPLOG00000015320)	PKN3 (ENSPLOG00000015084)	ZDHHC12 (ENSPLOG00000014971)	ZER1 (ENSPLOG00000014914)	TBC1D13 (ENSPLOG00000014777)	ENDOG (ENSPLOG00000014686)	SPOUT1 (ENSPLOG00000014556)	ENSPLOG00000014265	LRRC8A (ENSPLOG00000014161)	PHYHD1 (ENSPLOG00000014084)	DOLK (ENSPLOG00000014046)
Tiger	MODERN SPECIES	121																ODF2 (ENSPTIG00000014756) ##22	GLE1 (ENSPTIG00000020770)	SPTAN1 (ENSPTIG00000021570)	DYNC2I2 (ENSPTIG00000018050)	SET (ENSPTIG00000019383)	PKN3 (ENSPTIG00000021126)	ZDHHC12 (ENSPTIG00000002433)	ZER1 (ENSPTIG00000006324)	TBC1D13 (ENSPTIG00000007577)	SPOUT1 (ENSPTIG00000010445)	KYAT1 (ENSPTIG00000011042)	LRRC8A (ENSPTIG00000014161)	PHYHD1 (ENSPTIG00000014637)	DOLK (ENSPTIG00000005843)	NUP188 (ENSPTIG00000017265)	SH3GLB2 (ENSPTIG00000019557)
Cat	MODERN SPECIES	244	SLC25A25 (ENSFCAG00000001495)	PTGES2 (ENSFCAG00000012690)	ENSFCAG00000042752	ENSFCAG00000001496	ENSFCAG00000042763	BBLN (ENSFCAG00000035556)	CIZ1 (ENSFCAG00000014677)	DNM1 (ENSFCAG00000005837)	ENSFCAG00000019225	SWI5 (ENSFCAG00000005838)	TRUB2 (ENSFCAG00000005839)	COQ4 (ENSFCAG00000005840)	SLC27A4 (ENSFCAG00000005841)	URM1 (ENSFCAG00000005842)	CERCAM (ENSFCAG00000005843)	ODF2 (ENSFCAG00000005844) ##22	GLE1 (ENSFCAG00000005845)	SPTAN1 (ENSFCAG00000005846)	DYNC2I2 (ENSFCAG00000005847)	ENSFCAG00000005848	PKN3 (ENSFCAG00000005851)	ZDHHC12 (ENSFCAG00000005854)	ZER1 (ENSFCAG00000005856)	TBC1D13 (ENSFCAG00000005857)	ENDOG (ENSFCAG00000005859)	SPOUT1 (ENSFCAG00000030593)	KYAT1 (ENSFCAG00000005862)	LRRC8A (ENSFCAG00000005863)	PHYHD1 (ENSFCAG00000005865)	DOLK (ENSFCAG00000024940)	NUP188 (ENSFCAG00000005867)
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Equus	ANCESTRAL SPECIES	30	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Donkey	MODERN SPECIES	1	NAIF1 (ENSEASG00005020406)	SLC25A25 (ENSEASG00005020399)	PTGES2 (ENSEASG00005020397)	ENSEASG00005020393	ENSEASG00005025180	CIZ1 (ENSEASG00005020348)	DNM1 (ENSEASG00005017247)	ENSEASG00005016851	SWI5 (ENSEASG00005035203)	TRUB2 (ENSEASG00005016819)	COQ4 (ENSEASG00005016814)	SLC27A4 (ENSEASG00005016248)	URM1 (ENSEASG00005023786)	CERCAM (ENSEASG00005016174)	ENSEASG00005016167	ODF2 (ENSEASG00005015652) ##22	GLE1 (ENSEASG00005015580)	SPTAN1 (ENSEASG00005008947)	DYNC2I2 (ENSEASG00005008429)	SET (ENSEASG00005008414)	ZDHHC12 (ENSEASG00005030221)	PKN3 (ENSEASG00005008409)	ZER1 (ENSEASG00005007785)	TBC1D13 (ENSEASG00005007723)	ENDOG (ENSEASG00005007720)	SPOUT1 (ENSEASG00005007715)	KYAT1 (ENSEASG00005007709)	LRRC8A (ENSEASG00005007708)	PHYHD1 (ENSEASG00005007517)	DOLK (ENSEASG00005028058)	NUP188 (ENSEASG00005007542)
Horse	MODERN SPECIES	17	DPM2 (ENSECAG00000007086)	EEIG1 (ENSECAG00000007164)	NAIF1 (ENSECAG00000014827)	SLC25A25 (ENSECAG00000015267)	PTGES2 (ENSECAG00000016744)	LCN2 (ENSECAG00000020957)	BBLN (ENSECAG00000036564)	CIZ1 (ENSECAG00000007116)	DNM1 (ENSECAG00000022878)	ENSECAG00000000485	TRUB2 (ENSECAG00000023520)	COQ4 (ENSECAG00000048391)	SLC27A4 (ENSECAG00000011716)	ENSECAG00000054955	CERCAM (ENSECAG00000013870)	ODF2 (ENSECAG00000011337) ##22	GLE1 (ENSECAG00000010980)	SPTAN1 (ENSECAG00000021297)	DYNC2I2 (ENSECAG00000024224)	SET (ENSECAG00000009117)	PKN3 (ENSECAG00000017351)	ZDHHC12 (ENSECAG00000012555)	ZER1 (ENSECAG00000015821)	TBC1D13 (ENSECAG00000007916)	ENDOG (ENSECAG00000009809)	SPOUT1 (ENSECAG00000010177)	KYAT1 (ENSECAG00000022067)	LRRC8A (ENSECAG00000013359)	DOLK (ENSECAG00000051192)	NUP188 (ENSECAG00000006134)	SH3GLB2 (ENSECAG00000004437)
Chiroptera	ANCESTRAL SPECIES	8	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00940000164950	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Microchiroptera	ANCESTRAL SPECIES	7	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00940000164950	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Greater horseshoe bat	MODERN SPECIES	3	EEIG1 (ENSRFEG00010016498)	NAIF1 (ENSRFEG00010016568)	SLC25A25 (ENSRFEG00010016612)	PTGES2 (ENSRFEG00010016829)	LCN2 (ENSRFEG00010016852)	ENSRFEG00010016891	CIZ1 (ENSRFEG00010016921)	DNM1 (ENSRFEG00010017078)	ENSRFEG00010017344	SWI5 (ENSRFEG00010017917)	TRUB2 (ENSRFEG00010017959)	COQ4 (ENSRFEG00010018061)	SLC27A4 (ENSRFEG00010018105)	ENSRFEG00010018219	CERCAM (ENSRFEG00010018305)	ODF2 (ENSRFEG00010018422) ##22	GLE1 (ENSRFEG00010019081)	SPTAN1 (ENSRFEG00010019570)	DYNC2I2 (ENSRFEG00010020990)	ENSRFEG00010021026	PKN3 (ENSRFEG00010021078)	ZDHHC12 (ENSRFEG00010021123)	ZER1 (ENSRFEG00010021150)	TBC1D13 (ENSRFEG00010021197)	ENDOG (ENSRFEG00010021222)	SPOUT1 (ENSRFEG00010021243)	KYAT1 (ENSRFEG00010021274)	LRRC8A (ENSRFEG00010021299)	PHYHD1 (ENSRFEG00010021320)	DOLK (ENSRFEG00010021371)	NUP188 (ENSRFEG00010021406)
Microbat	MODERN SPECIES	1399			PTGES2 (ENSMLUG00000013576)	ENSMLUG00000016210	ENSMLUG00000029693	ENSMLUG00000016217	CIZ1 (ENSMLUG00000016220)	DNM1 (ENSMLUG00000016237)	ENSMLUG00000005290	SWI5 (ENSMLUG00000005277)	TRUB2 (ENSMLUG00000005256)	COQ4 (ENSMLUG00000027662)	ENSMLUG00000024488	URM1 (ENSMLUG00000007275)	CERCAM (ENSMLUG00000007289)	ODF2 (ENSMLUG00000007343) ##22	ENSMLUG00000007379	SPTAN1 (ENSMLUG00000007420)	DYNC2I2 (ENSMLUG00000007516)	SET (ENSMLUG00000014291)	PKN3 (ENSMLUG00000014295)	ZDHHC12 (ENSMLUG00000014311)	ZER1 (ENSMLUG00000004608)	TBC1D13 (ENSMLUG00000014313)	ENDOG (ENSMLUG00000014319)	SPOUT1 (ENSMLUG00000014330)	KYAT1 (ENSMLUG00000014338)	LRRC8A (ENSMLUG00000011113)	PHYHD1 (ENSMLUG00000011117)	DOLK (ENSMLUG00000008768)	NUP188 (ENSMLUG00000011149)
Megabat	MODERN SPECIES	755																ODF2 (ENSPVAG00000008110) ##22	GLE1 (ENSPVAG00000008115)
Eulipotyphla	ANCESTRAL SPECIES	1335																ENSGT00530000063497.a ##22	ENSGT00390000012903
Common shrew	MODERN SPECIES	2553																ODF2 (ENSSARG00000001089) ##22	GLE1 (ENSSARG00000001110)
Hedgehog	MODERN SPECIES	3393																ODF2 (ENSEEUG00000004935) ##22
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Primates	ANCESTRAL SPECIES	9	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224.o	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00390000013732.n	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a.c ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Cebidae	ANCESTRAL SPECIES	7	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224.o	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00390000013732.n	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a.c ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Cebidae_a	ANCESTRAL SPECIES	68	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224.o	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00390000013732.n	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a.c ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483
Capuchin	MODERN SPECIES	216	NAIF1 (ENSCCAG00000032986)	SLC25A25 (ENSCCAG00000024589)	PTGES2 (ENSCCAG00000036490)	LCN2 (ENSCCAG00000023292)	BBLN (ENSCCAG00000031582)	CIZ1 (ENSCCAG00000026440)	DNM1 (ENSCCAG00000029047)	GOLGA2 (ENSCCAG00000037988)	SWI5 (ENSCCAG00000019891)	MRI1 (ENSCCAG00000035484)	ENSCCAG00000026531	COQ4 (ENSCCAG00000023041)	SLC27A4 (ENSCCAG00000030812)	URM1 (ENSCCAG00000032510)	CERCAM (ENSCCAG00000003920)	ODF2 (ENSCCAG00000011357) ##22	GLE1 (ENSCCAG00000034829)	SPTAN1 (ENSCCAG00000029377)	DYNC2I2 (ENSCCAG00000032802)
Bolivian squirrel monkey	MODERN SPECIES	172	NAIF1 (ENSSBOG00000034718)	SLC25A25 (ENSSBOG00000022563)	ENSSBOG00000012374	LCN2 (ENSSBOG00000030874)	BBLN (ENSSBOG00000022463)	CIZ1 (ENSSBOG00000030332)	DNM1 (ENSSBOG00000019066)	GOLGA2 (ENSSBOG00000031355)	ENSSBOG00000033092	ENSSBOG00000029825	TRUB2 (ENSSBOG00000022439)	COQ4 (ENSSBOG00000027199)	SLC27A4 (ENSSBOG00000035075)	URM1 (ENSSBOG00000030293)	CERCAM (ENSSBOG00000028939)	ENSSBOG00000033778 ##22	GLE1 (ENSSBOG00000020790)	SPTAN1 (ENSSBOG00000027442)	DYNC2I2 (ENSSBOG00000012533)
Marmoset	MODERN SPECIES		EEIG1 (ENSCJAG00000019920)	NAIF1 (ENSCJAG00000047246)	SLC25A25 (ENSCJAG00000019924)	PTGES2 (ENSCJAG00000019932)	ENSCJAG00000019936	ENSCJAG00000057951	CIZ1 (ENSCJAG00000019948)	DNM1 (ENSCJAG00000019967)	GOLGA2 (ENSCJAG00000019995)	SWI5 (ENSCJAG00000019842)	TRUB2 (ENSCJAG00000020009)	COQ4 (ENSCJAG00000020013)	SLC27A4 (ENSCJAG00000020016)	URM1 (ENSCJAG00000020036)	CERCAM (ENSCJAG00000043652)	ODF2 (ENSCJAG00000020042) ##22	GLE1 (ENSCJAG00000020060)	SPTAN1 (ENSCJAG00000020080)	DYNC2I2 (ENSCJAG00000020157)	ENSCJAG00000047551	PKN3 (ENSCJAG00000020165)	ZDHHC12 (ENSCJAG00000020184)	ZER1 (ENSCJAG00000020189)	TBC1D13 (ENSCJAG00000020207)	ENDOG (ENSCJAG00000020220)	SPOUT1 (ENSCJAG00000020221)	KYAT1 (ENSCJAG00000020240)	LRRC8A (ENSCJAG00000020246)	PHYHD1 (ENSCJAG00000020054)	DOLK (ENSCJAG00000020248)	NUP188 (ENSCJAG00000020249)
Mas night monkey	MODERN SPECIES	768	EEIG1 (ENSANAG00000037837)	NAIF1 (ENSANAG00000030108)	SLC25A25 (ENSANAG00000033704)	ENSANAG00000035454	CIZ1 (ENSANAG00000037943)	BBLN (ENSANAG00000037388)	DNM1 (ENSANAG00000027575)	GOLGA2 (ENSANAG00000020766)	SWI5 (ENSANAG00000032755)	ENSANAG00000035382	TRUB2 (ENSANAG00000036234)	ENSANAG00000022859	SLC27A4 (ENSANAG00000024035)	URM1 (ENSANAG00000036717)	CERCAM (ENSANAG00000019980)	ENSANAG00000034620 ##22	GLE1 (ENSANAG00000031688)	SPTAN1 (ENSANAG00000032080)	DYNC2I2 (ENSANAG00000027697)	ENSANAG00000025517	PKN3 (ENSANAG00000034145)	ZDHHC12 (ENSANAG00000035881)	ZER1 (ENSANAG00000029586)	TBC1D13 (ENSANAG00000036964)	SPOUT1 (ENSANAG00000036350)	KYAT1 (ENSANAG00000034498)	LRRC8A (ENSANAG00000035694)	PHYHD1 (ENSANAG00000036355)	DOLK (ENSANAG00000012512)	NUP188 (ENSANAG00000036382)	SH3GLB2 (ENSANAG00000022410)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00530000063497.a.d ##22
Mas night monkey	MODERN SPECIES	343									ENSANAG00000030016	ENSANAG00000030780	SPATA13 (ENSANAG00000033761)	ENSANAG00000019521	ENSANAG00000021371	MIPEP (ENSANAG00000027557)	TNFRSF19 (ENSANAG00000032061)	ENSANAG00000022043 ##22	SACS (ENSANAG00000035314)	SGCG (ENSANAG00000035637)	ENSANAG00000031766	ENSANAG00000034653	ZDHHC20 (ENSANAG00000029922)	ENSANAG00000031404	ATP8A2 (ENSANAG00000031539)	ENSANAG00000032345	SHISA2 (ENSANAG00000035019)	RNF6 (ENSANAG00000029061)	CDK8 (ENSANAG00000019361)	WASF3 (ENSANAG00000032101)	ENSANAG00000019364	GPR12 (ENSANAG00000019460)	ENSANAG00000025862
Cebidae	ANCESTRAL SPECIES																	ENSGT00530000063497.a.d ##22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00530000063497.a.d ##22
Bolivian squirrel monkey	MODERN SPECIES	42	DDB1 (ENSSBOG00000019775)	VWCE (ENSSBOG00000033384)	ENSSBOG00000023353	VPS37C (ENSSBOG00000005239)	CD5 (ENSSBOG00000030827)	CD6 (ENSSBOG00000019140)	SLC15A3 (ENSSBOG00000030393)	TMEM132A (ENSSBOG00000029033)	TMEM109 (ENSSBOG00000033047)	PRPF19 (ENSSBOG00000022840)	ZP1 (ENSSBOG00000018306)	CCDC86 (ENSSBOG00000029431)	MS4A10 (ENSSBOG00000004723)	MS4A15 (ENSSBOG00000028681)	MS4A18 (ENSSBOG00000007473)	ENSSBOG00000028917 ##22	MS4A8 (ENSSBOG00000033585)	MS4A13 (ENSSBOG00000028688)	MS4A12 (ENSSBOG00000019083)	MS4A1 (ENSSBOG00000005433)	MS4A5 (ENSSBOG00000021856)	MS4A14 (ENSSBOG00000033657)	MS4A7 (ENSSBOG00000024416)	MS4A6E (ENSSBOG00000002932)	MS4A4A (ENSSBOG00000026288)	ENSSBOG00000031328	MS4A6A (ENSSBOG00000031685)	ENSSBOG00000004477	MS4A3 (ENSSBOG00000028993)	TCN1 (ENSSBOG00000033565)	CBLIF (ENSSBOG00000027669)
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00910000148123	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000154891.g.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067
Hominoidea	ANCESTRAL SPECIES	19	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00910000148123	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Hominidae	ANCESTRAL SPECIES	10	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00520000055649.a.j.b	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00520000055649.a.j.b	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00520000055649.a.j.b	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Pan	ANCESTRAL SPECIES	18	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b.a	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00520000055649.a.j.b	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Chimpanzee	MODERN SPECIES	22	EEIG1 (ENSPTRG00000029085)	ENSPTRG00000045521	SLC25A25 (ENSPTRG00000021410)	PTGES2 (ENSPTRG00000021411)	LCN2 (ENSPTRG00000021412)	BBLN (ENSPTRG00000021413)	ENSPTRG00000051341	DNM1 (ENSPTRG00000021418)	GOLGA2 (ENSPTRG00000021419)	SWI5 (ENSPTRG00000021421)	TRUB2 (ENSPTRG00000021423)	COQ4 (ENSPTRG00000021424)	SLC27A4 (ENSPTRG00000021425)	URM1 (ENSPTRG00000021427)	CERCAM (ENSPTRG00000021429)	ODF2 (ENSPTRG00000021430) ##22	GLE1 (ENSPTRG00000021431)	SPTAN1 (ENSPTRG00000021433)	DYNC2I2 (ENSPTRG00000021435)	SET (ENSPTRG00000021436)	PKN3 (ENSPTRG00000021437)	ZDHHC12 (ENSPTRG00000021438)	ZER1 (ENSPTRG00000021439)	TBC1D13 (ENSPTRG00000021440)	ENDOG (ENSPTRG00000029057)	SPOUT1 (ENSPTRG00000023427)	KYAT1 (ENSPTRG00000021442)	LRRC8A (ENSPTRG00000021443)	PHYHD1 (ENSPTRG00000021444)	DOLK (ENSPTRG00000029053)	NUP188 (ENSPTRG00000021445)
Bonobo	MODERN SPECIES	22	NAIF1 (ENSPPAG00000029010)	SLC25A25 (ENSPPAG00000025581)	PTGES2 (ENSPPAG00000026594)	LCN2 (ENSPPAG00000026663)	BBLN (ENSPPAG00000026511)	CIZ1 (ENSPPAG00000030730)	DNM1 (ENSPPAG00000034098)	GOLGA2 (ENSPPAG00000038869)	ENSPPAG00000032486	TRUB2 (ENSPPAG00000043146)	COQ4 (ENSPPAG00000035816)	SLC27A4 (ENSPPAG00000041626)	ENSPPAG00000030946	CERCAM (ENSPPAG00000027908)	ENSPPAG00000033698	ODF2 (ENSPPAG00000033159) ##22	GLE1 (ENSPPAG00000033580)	SPTAN1 (ENSPPAG00000036825)	DYNC2I2 (ENSPPAG00000028057)	ENSPPAG00000028813	PKN3 (ENSPPAG00000043402)	ZDHHC12 (ENSPPAG00000039041)	ZER1 (ENSPPAG00000033759)	TBC1D13 (ENSPPAG00000014377)	ENSPPAG00000041190	SPOUT1 (ENSPPAG00000001094)	KYAT1 (ENSPPAG00000036497)	LRRC8A (ENSPPAG00000043862)	ENSPPAG00000034131	DOLK (ENSPPAG00000016072)	NUP188 (ENSPPAG00000038013)
Human	MODERN SPECIES	21	EEIG1 (ENSG00000167106)	NAIF1 (ENSG00000171169)	SLC25A25 (ENSG00000148339)	PTGES2 (ENSG00000148334)	LCN2 (ENSG00000148346)	BBLN (ENSG00000171159)	CIZ1 (ENSG00000148337)	DNM1 (ENSG00000106976)	GOLGA2 (ENSG00000167110)	SWI5 (ENSG00000175854)	TRUB2 (ENSG00000167112)	COQ4 (ENSG00000167113)	SLC27A4 (ENSG00000167114)	URM1 (ENSG00000167118)	CERCAM (ENSG00000167123)	ODF2 (ENSG00000136811) ##22	GLE1 (ENSG00000119392)	SPTAN1 (ENSG00000197694)	DYNC2I2 (ENSG00000119333)	SET (ENSG00000119335)	PKN3 (ENSG00000160447)	ZDHHC12 (ENSG00000160446)	ZER1 (ENSG00000160445)	TBC1D13 (ENSG00000107021)	ENDOG (ENSG00000167136)	SPOUT1 (ENSG00000198917)	ENSG00000286112	KYAT1 (ENSG00000171097)	LRRC8A (ENSG00000136802)	PHYHD1 (ENSG00000175287)	ENSG00000251184
Gorilla	MODERN SPECIES	22	NAIF1 (ENSGGOG00000011178)	SLC25A25 (ENSGGOG00000013681)	PTGES2 (ENSGGOG00000013692)	LCN2 (ENSGGOG00000014990)	BBLN (ENSGGOG00000025371)	CIZ1 (ENSGGOG00000014999)	ENSGGOG00000016836	ENSGGOG00000039478	GOLGA2 (ENSGGOG00000023870)	ENSGGOG00000028061	TRUB2 (ENSGGOG00000014780)	COQ4 (ENSGGOG00000014789)	SLC27A4 (ENSGGOG00000014793)	URM1 (ENSGGOG00000014806)	CERCAM (ENSGGOG00000005019)	ODF2 (ENSGGOG00000001354) ##22	GLE1 (ENSGGOG00000001356)	SPTAN1 (ENSGGOG00000007615)	DYNC2I2 (ENSGGOG00000007643)	ENSGGOG00000025716	PKN3 (ENSGGOG00000011365)	ZDHHC12 (ENSGGOG00000011375)	ZER1 (ENSGGOG00000012363)	TBC1D13 (ENSGGOG00000003145)	ENDOG (ENSGGOG00000014224)	SPOUT1 (ENSGGOG00000014228)	KYAT1 (ENSGGOG00000007427)	LRRC8A (ENSGGOG00000017010)	ENSGGOG00000017015	DOLK (ENSGGOG00000004805)	NUP188 (ENSGGOG00000015291)
Orangutan	MODERN SPECIES	22	NAIF1 (ENSPPYG00000019640)	SLC25A25 (ENSPPYG00000019641)	PTGES2 (ENSPPYG00000019642)	ENSPPYG00000019643	ENSPPYG00000041461	CIZ1 (ENSPPYG00000019645)	DNM1 (ENSPPYG00000019646)	GOLGA2 (ENSPPYG00000019647)	ENSPPYG00000019648	ENSPPYG00000034385	TRUB2 (ENSPPYG00000019650)	COQ4 (ENSPPYG00000019651)	SLC27A4 (ENSPPYG00000019652)	ENSPPYG00000034351	CERCAM (ENSPPYG00000019653)	ODF2 (ENSPPYG00000019655) ##22	GLE1 (ENSPPYG00000019656)	SPTAN1 (ENSPPYG00000019657)	DYNC2I2 (ENSPPYG00000019658)	ENSPPYG00000019659	PKN3 (ENSPPYG00000029746)	ENSPPYG00000019660	ZER1 (ENSPPYG00000019661)	TBC1D13 (ENSPPYG00000019662)	ENDOG (ENSPPYG00000031616)	ENSPPYG00000019664	ENSPPYG00000019665	LRRC8A (ENSPPYG00000019666)	ENSPPYG00000019668	DOLK (ENSPPYG00000019669)	NUP188 (ENSPPYG00000019670)
Gibbon	MODERN SPECIES	23	NAIF1 (ENSNLEG00000017520)	SLC25A25 (ENSNLEG00000017522)	PTGES2 (ENSNLEG00000017529)	LCN2 (ENSNLEG00000027540)	BBLN (ENSNLEG00000017540)	CIZ1 (ENSNLEG00000017541)	DNM1 (ENSNLEG00000017543)	GOLGA2 (ENSNLEG00000017552)	ENSNLEG00000017555	TRUB2 (ENSNLEG00000017556)	COQ4 (ENSNLEG00000017557)	SLC27A4 (ENSNLEG00000017562)	ENSNLEG00000031211	CERCAM (ENSNLEG00000027773)	ENSNLEG00000017571	ODF2 (ENSNLEG00000017572) ##22	GLE1 (ENSNLEG00000026659)	SPTAN1 (ENSNLEG00000017584)	DYNC2I2 (ENSNLEG00000017587)	ENSNLEG00000017595	PKN3 (ENSNLEG00000017597)	ZDHHC12 (ENSNLEG00000035415)	ZER1 (ENSNLEG00000017607)	TBC1D13 (ENSNLEG00000017611)	ENSNLEG00000017615	SPOUT1 (ENSNLEG00000017619)	ENSNLEG00000017629	ENSNLEG00000035638	LRRC8A (ENSNLEG00000017633)	ENSNLEG00000033295	DOLK (ENSNLEG00000019000)
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00910000148123	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891.g.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00910000148123	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891.g.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Vervet Monkey	MODERN SPECIES	3	EEIG1 (ENSCSAG00000013980)	NAIF1 (ENSCSAG00000013989)	SLC25A25 (ENSCSAG00000013992)	PTGES2 (ENSCSAG00000014017)	LCN2 (ENSCSAG00000014039)	ENSCSAG00000014048	CIZ1 (ENSCSAG00000014060)	DNM1 (ENSCSAG00000014071)	GOLGA2 (ENSCSAG00000014092)	SWI5 (ENSCSAG00000014101)	TRUB2 (ENSCSAG00000014117)	ENSCSAG00000014139	SLC27A4 (ENSCSAG00000014184)	URM1 (ENSCSAG00000014200)	CERCAM (ENSCSAG00000014210)	ODF2 (ENSCSAG00000014217) ##22	GLE1 (ENSCSAG00000014225)	SPTAN1 (ENSCSAG00000014277)	DYNC2I2 (ENSCSAG00000014303)	PKN3 (ENSCSAG00000014351)	ZDHHC12 (ENSCSAG00000014378)	ZER1 (ENSCSAG00000014389)	TBC1D13 (ENSCSAG00000014420)	ENDOG (ENSCSAG00000014436)	KYAT1 (ENSCSAG00000014449)	LRRC8A (ENSCSAG00000014458)	PHYHD1 (ENSCSAG00000014469)	DOLK (ENSCSAG00000019710)	NUP188 (ENSCSAG00000014498)	SH3GLB2 (ENSCSAG00000014507)	MIGA2 (ENSCSAG00000014520)
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00990000205037.a	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00910000148123	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891.g.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Macaca	ANCESTRAL SPECIES	10	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349.h	ENSGT00990000205037.a	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00910000148123	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891.g.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Pig-tailed macaque	MODERN SPECIES	317	NAIF1 (ENSMNEG00000044950)	SLC25A25 (ENSMNEG00000043707)	PTGES2 (ENSMNEG00000043945)	LCN2 (ENSMNEG00000041872)	ENSMNEG00000033466	CIZ1 (ENSMNEG00000041837)	DNM1 (ENSMNEG00000033192)	GOLGA2 (ENSMNEG00000030926)	ENSMNEG00000038127	ENSMNEG00000024605	TRUB2 (ENSMNEG00000011189)	COQ4 (ENSMNEG00000034390)	SLC27A4 (ENSMNEG00000036914)	ENSMNEG00000045304	CERCAM (ENSMNEG00000041383)	ODF2 (ENSMNEG00000030817) ##22	GLE1 (ENSMNEG00000035668)	SPTAN1 (ENSMNEG00000032010)	DYNC2I2 (ENSMNEG00000026539)	ENSMNEG00000030324	PKN3 (ENSMNEG00000036073)	ZDHHC12 (ENSMNEG00000030634)	ZER1 (ENSMNEG00000027302)	TBC1D13 (ENSMNEG00000041058)	ENDOG (ENSMNEG00000030787)	SPOUT1 (ENSMNEG00000042898)	KYAT1 (ENSMNEG00000031327)	LRRC8A (ENSMNEG00000030674)	PHYHD1 (ENSMNEG00000026623)	DOLK (ENSMNEG00000024878)	NUP188 (ENSMNEG00000035446)
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349.h	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00910000148123	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891.g.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742	ENSGT00940000155841
Rhesus	MODERN SPECIES	6	NAIF1 (ENSMMUG00000004685)	SLC25A25 (ENSMMUG00000021833)	PTGES2 (ENSMMUG00000018258)	LCN2 (ENSMMUG00000023801)	BBLN (ENSMMUG00000032017)	CIZ1 (ENSMMUG00000013712)	DNM1 (ENSMMUG00000013717)	GOLGA2 (ENSMMUG00000022967)	ENSMMUG00000004865	TRUB2 (ENSMMUG00000014146)	COQ4 (ENSMMUG00000014147)	SLC27A4 (ENSMMUG00000014148)	URM1 (ENSMMUG00000018612)	ENSMMUG00000044236	ENSMMUG00000032020	ODF2 (ENSMMUG00000005987) ##22	GLE1 (ENSMMUG00000005989)	SPTAN1 (ENSMMUG00000009327)	DYNC2I2 (ENSMMUG00000009333)	ENSMMUG00000038373	PKN3 (ENSMMUG00000010143)	ZDHHC12 (ENSMMUG00000041713)	ZER1 (ENSMMUG00000010870)	TBC1D13 (ENSMMUG00000019179)	ENSMMUG00000047511	ENSMMUG00000021848	LRRC8A (ENSMMUG00000017799)	PHYHD1 (ENSMMUG00000032026)	DOLK (ENSMMUG00000011755)	NUP188 (ENSMMUG00000011757)	SH3GLB2 (ENSMMUG00000011759)
Crab-eating macaque	MODERN SPECIES	6	ENSMFAG00000057443	CDK9 (ENSMFAG00000033992)	FPGS (ENSMFAG00000030927)	ENG (ENSMFAG00000034473)	AK1 (ENSMFAG00000032155)	ST6GALNAC6 (ENSMFAG00000053975)	DNM1 (ENSMFAG00000030581)	GOLGA2 (ENSMFAG00000044527)	ENSMFAG00000031210	TRUB2 (ENSMFAG00000000881)	COQ4 (ENSMFAG00000039955)	SLC27A4 (ENSMFAG00000032514)	URM1 (ENSMFAG00000035214)	CERCAM (ENSMFAG00000001783)	ENSMFAG00000034501	ODF2 (ENSMFAG00000001606) ##22	GLE1 (ENSMFAG00000036995)	SPTAN1 (ENSMFAG00000044099)	DYNC2I2 (ENSMFAG00000042393)	ENSMFAG00000002535	ZDHHC12 (ENSMFAG00000002386)	ZER1 (ENSMFAG00000040364)	TBC1D13 (ENSMFAG00000033076)	SPOUT1 (ENSMFAG00000016739)	ENSMFAG00000065292	KYAT1 (ENSMFAG00000001847)	ENSMFAG00000034348	ENSMFAG00000047842	DOLPP1 (ENSMFAG00000038391)	CRAT (ENSMFAG00000002439)	PTPA (ENSMFAG00000036348)
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00990000205037.a	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00910000148123	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891.g.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Cercopithecinae_d	ANCESTRAL SPECIES	56	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT00390000009349	ENSGT00990000205037.a	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00910000148123	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891.g.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Sooty mangabey	MODERN SPECIES	489	NAIF1 (ENSCATG00000028502)	SLC25A25 (ENSCATG00000038464)	PTGES2 (ENSCATG00000041852)	LCN2 (ENSCATG00000035627)	BBLN (ENSCATG00000038245)	CIZ1 (ENSCATG00000034742)	DNM1 (ENSCATG00000043297)	GOLGA2 (ENSCATG00000009434)	SWI5 (ENSCATG00000037395)	TRUB2 (ENSCATG00000038234)	COQ4 (ENSCATG00000030060)	SLC27A4 (ENSCATG00000009907)	URM1 (ENSCATG00000033068)	CERCAM (ENSCATG00000032420)	ENSCATG00000036786	ODF2 (ENSCATG00000014651) ##22	GLE1 (ENSCATG00000038445)	SPTAN1 (ENSCATG00000037805)	DYNC2I2 (ENSCATG00000036415)	ENSCATG00000020414	PKN3 (ENSCATG00000036821)	ZDHHC12 (ENSCATG00000019181)	ZER1 (ENSCATG00000037539)	TBC1D13 (ENSCATG00000044380)	ENDOG (ENSCATG00000037516)	SPOUT1 (ENSCATG00000042611)	KYAT1 (ENSCATG00000043522)	LRRC8A (ENSCATG00000037564)	PHYHD1 (ENSCATG00000044875)	DOLK (ENSCATG00000017895)	NUP188 (ENSCATG00000039802)
Drill	MODERN SPECIES	149	SLC25A25 (ENSMLEG00000028079)	ENSMLEG00000040301	LCN2 (ENSMLEG00000035283)	BBLN (ENSMLEG00000036489)	CIZ1 (ENSMLEG00000035347)	DNM1 (ENSMLEG00000032695)	GOLGA2 (ENSMLEG00000033003)	SWI5 (ENSMLEG00000039820)	ENSMLEG00000016595	TRUB2 (ENSMLEG00000037270)	ENSMLEG00000030345	SLC27A4 (ENSMLEG00000033402)	URM1 (ENSMLEG00000028542)	CERCAM (ENSMLEG00000031817)	ENSMLEG00000028698	ODF2 (ENSMLEG00000030672) ##22	GLE1 (ENSMLEG00000008252)	SPTAN1 (ENSMLEG00000042249)	DYNC2I2 (ENSMLEG00000042138)	ENSMLEG00000034568	PKN3 (ENSMLEG00000033963)	ZDHHC12 (ENSMLEG00000028249)	ZER1 (ENSMLEG00000042610)	TBC1D13 (ENSMLEG00000021631)	SPOUT1 (ENSMLEG00000028562)	KYAT1 (ENSMLEG00000043087)	LRRC8A (ENSMLEG00000031337)
Olive baboon	MODERN SPECIES	4	DPM2 (ENSPANG00000024838)	EEIG1 (ENSPANG00000024837)	ENSPANG00000024836	SLC25A25 (ENSPANG00000024867)	PTGES2 (ENSPANG00000024868)	LCN2 (ENSPANG00000024869)	ENSPANG00000037463	CIZ1 (ENSPANG00000024871)	DNM1 (ENSPANG00000025859)	GOLGA2 (ENSPANG00000025858)	SWI5 (ENSPANG00000025857)	TRUB2 (ENSPANG00000025856)	COQ4 (ENSPANG00000031182)	SLC27A4 (ENSPANG00000025877)	CERCAM (ENSPANG00000025881)	ODF2 (ENSPANG00000025879) ##22	SPTAN1 (ENSPANG00000025894)	DYNC2I2 (ENSPANG00000025902)	ENSPANG00000025900	PKN3 (ENSPANG00000025897)	ZDHHC12 (ENSPANG00000035442)	ZER1 (ENSPANG00000025924)	TBC1D13 (ENSPANG00000025925)	ENDOG (ENSPANG00000025933)	SPOUT1 (ENSPANG00000025932)	KYAT1 (ENSPANG00000025931)	ENSPANG00000037244	LRRC8A (ENSPANG00000025930)	DOLK (ENSPANG00000003223)	PHYHD1 (ENSPANG00000025929)	NUP188 (ENSPANG00000025928)
Rhinopithecus	ANCESTRAL SPECIES	2	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.c.b	ENSGT01050000246974	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891.g.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Black snub-nosed monkey	MODERN SPECIES	1385		NAIF1 (ENSRBIG00000036338)	SLC25A25 (ENSRBIG00000030028)	PTGES2 (ENSRBIG00000031136)	LCN2 (ENSRBIG00000039567)	BBLN (ENSRBIG00000029444)	CIZ1 (ENSRBIG00000034423)	DNM1 (ENSRBIG00000040479)	GOLGA2 (ENSRBIG00000036440)	ENSRBIG00000044787	TRUB2 (ENSRBIG00000006965)	COQ4 (ENSRBIG00000030655)	SLC27A4 (ENSRBIG00000033765)	URM1 (ENSRBIG00000041054)	CERCAM (ENSRBIG00000028951)	ODF2 (ENSRBIG00000026905) ##22	GLE1 (ENSRBIG00000036689)	SPTAN1 (ENSRBIG00000044761)	DYNC2I2 (ENSRBIG00000033189)	ENSRBIG00000043093	PKN3 (ENSRBIG00000033884)	ZDHHC12 (ENSRBIG00000029977)	ZER1 (ENSRBIG00000022292)	TBC1D13 (ENSRBIG00000039606)	ENDOG (ENSRBIG00000026558)	SPOUT1 (ENSRBIG00000026633)	KYAT1 (ENSRBIG00000030782)	LRRC8A (ENSRBIG00000036375)	PHYHD1 (ENSRBIG00000044267)	DOLK (ENSRBIG00000009633)	NUP188 (ENSRBIG00000025456)
Golden snub-nosed monkey	MODERN SPECIES	923																ODF2 (ENSRROG00000031799) ##22	GLE1 (ENSRROG00000035562)	SPTAN1 (ENSRROG00000042184)	DYNC2I2 (ENSRROG00000000070)	ENSRROG00000043012	PKN3 (ENSRROG00000039599)	ZDHHC12 (ENSRROG00000039840)	ZER1 (ENSRROG00000036128)	TBC1D13 (ENSRROG00000018115)	SPOUT1 (ENSRROG00000038155)	ENDOG (ENSRROG00000038553)	KYAT1 (ENSRROG00000044573)	LRRC8A (ENSRROG00000031274)	PHYHD1 (ENSRROG00000031502)	DOLK (ENSRROG00000025535)	NUP188 (ENSRROG00000032865)
Tarsier	MODERN SPECIES	4886									ENSTSYG00000030250	SWI5 (ENSTSYG00000031853)	TRUB2 (ENSTSYG00000034163)	COQ4 (ENSTSYG00000025423)	SLC27A4 (ENSTSYG00000002947)	URM1 (ENSTSYG00000028376)	CERCAM (ENSTSYG00000037274)	ODF2 (ENSTSYG00000013920) ##22	GLE1 (ENSTSYG00000000174)
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Lemuriformes	ANCESTRAL SPECIES	12	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Lemuriformes_a	ANCESTRAL SPECIES	2	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Coquerels sifaka	MODERN SPECIES	168	EEIG1 (ENSPCOG00000024116)	NAIF1 (ENSPCOG00000021257)	SLC25A25 (ENSPCOG00000019986)	PTGES2 (ENSPCOG00000009389)	LCN2 (ENSPCOG00000013905)	BBLN (ENSPCOG00000026958)	CIZ1 (ENSPCOG00000027303)	DNM1 (ENSPCOG00000026903)	ENSPCOG00000015095	ENSPCOG00000018443	TRUB2 (ENSPCOG00000017100)	COQ4 (ENSPCOG00000019590)	SLC27A4 (ENSPCOG00000013531)	URM1 (ENSPCOG00000021449)	CERCAM (ENSPCOG00000018228)	ODF2 (ENSPCOG00000025698) ##22	GLE1 (ENSPCOG00000017042)	SPTAN1 (ENSPCOG00000027155)	DYNC2I2 (ENSPCOG00000014797)	SET (ENSPCOG00000025517)	PKN3 (ENSPCOG00000027227)	ZDHHC12 (ENSPCOG00000014328)	ZER1 (ENSPCOG00000027080)	TBC1D13 (ENSPCOG00000016027)	ENDOG (ENSPCOG00000022447)	SPOUT1 (ENSPCOG00000002584)	KYAT1 (ENSPCOG00000025020)	LRRC8A (ENSPCOG00000014012)	PHYHD1 (ENSPCOG00000024815)	DOLK (ENSPCOG00000013396)	NUP188 (ENSPCOG00000022765)
Greater bamboo lemur	MODERN SPECIES	1052	NAIF1 (ENSPSMG00000008022)	SLC25A25 (ENSPSMG00000007935)	PTGES2 (ENSPSMG00000007775)	LCN2 (ENSPSMG00000007755)	ENSPSMG00000007750	CIZ1 (ENSPSMG00000007658)	DNM1 (ENSPSMG00000006303)	ENSPSMG00000005857	SWI5 (ENSPSMG00000005851)	ENSPSMG00000005840	TRUB2 (ENSPSMG00000005835)	COQ4 (ENSPSMG00000005821)	SLC27A4 (ENSPSMG00000005787)	URM1 (ENSPSMG00000005739)	CERCAM (ENSPSMG00000005710)	ODF2 (ENSPSMG00000004808) ##22	GLE1 (ENSPSMG00000004083)	SPTAN1 (ENSPSMG00000002236)	DYNC2I2 (ENSPSMG00000000885)
Mouse lemur	MODERN SPECIES	1	NAIF1 (ENSMICG00000034966)	SLC25A25 (ENSMICG00000012781)	PTGES2 (ENSMICG00000009604)	LCN2 (ENSMICG00000003402)	BBLN (ENSMICG00000046320)	CIZ1 (ENSMICG00000003411)	DNM1 (ENSMICG00000003416)	ENSMICG00000036450	SWI5 (ENSMICG00000003457)	TRUB2 (ENSMICG00000047032)	COQ4 (ENSMICG00000017636)	SLC27A4 (ENSMICG00000017637)	URM1 (ENSMICG00000042967)	CERCAM (ENSMICG00000043310)	ENSMICG00000045086	ODF2 (ENSMICG00000017639) ##22	ENSMICG00000017640	SPTAN1 (ENSMICG00000017641)	DYNC2I2 (ENSMICG00000017642)	ENSMICG00000017643	PKN3 (ENSMICG00000017644)	ZDHHC12 (ENSMICG00000017645)	ZER1 (ENSMICG00000017646)	TBC1D13 (ENSMICG00000017647)	ENDOG (ENSMICG00000017648)	SPOUT1 (ENSMICG00000017649)	KYAT1 (ENSMICG00000014042)	LRRC8A (ENSMICG00000036276)	PHYHD1 (ENSMICG00000005825)	DOLK (ENSMICG00000005845)	NUP188 (ENSMICG00000005848)
Bushbaby	MODERN SPECIES	129	DPM2 (ENSOGAG00000008144)	EEIG1 (ENSOGAG00000027186)	NAIF1 (ENSOGAG00000031498)	SLC25A25 (ENSOGAG00000011032)	PTGES2 (ENSOGAG00000011029)	LCN2 (ENSOGAG00000033111)	BBLN (ENSOGAG00000027273)	CIZ1 (ENSOGAG00000013198)	DNM1 (ENSOGAG00000003491)	ENSOGAG00000003499	ENSOGAG00000003511	COQ4 (ENSOGAG00000003512)	SLC27A4 (ENSOGAG00000001440)	URM1 (ENSOGAG00000001445)	CERCAM (ENSOGAG00000001447)	ODF2 (ENSOGAG00000001450) ##22	GLE1 (ENSOGAG00000001452)	SPTAN1 (ENSOGAG00000006481)	DYNC2I2 (ENSOGAG00000006495)
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Tree shrew	MODERN SPECIES	1728																ODF2 (ENSTBEG00000016765) ##22	GLE1 (ENSTBEG00000017534)	SPTAN1 (ENSTBEG00000009651)
Glires	ANCESTRAL SPECIES	9	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Lagomorpha	ANCESTRAL SPECIES	16	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b
Rabbit	MODERN SPECIES	580	EEIG1 (ENSOCUG00000024612)	NAIF1 (ENSOCUG00000013385)	ENSOCUG00000026400	SLC25A25 (ENSOCUG00000007130)	LCN2 (ENSOCUG00000021002)	CIZ1 (ENSOCUG00000015985)	DNM1 (ENSOCUG00000012908)	ENSOCUG00000015982	ENSOCUG00000012923	SWI5 (ENSOCUG00000005318)	ENSOCUG00000026296	ENSOCUG00000016196	SLC27A4 (ENSOCUG00000008838)	URM1 (ENSOCUG00000008848)	ENSOCUG00000008855	ODF2 (ENSOCUG00000012298) ##22	GLE1 (ENSOCUG00000012314)	DYNC2I2 (ENSOCUG00000012360)	ENSOCUG00000007501	SPTAN1 (ENSOCUG00000012332)
Pika	MODERN SPECIES	582																ODF2 (ENSOPRG00000017050) ##22	GLE1 (ENSOPRG00000017060)	SPTAN1 (ENSOPRG00000017071)	ENSOPRG00000017103
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101.f	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Marmotini	ANCESTRAL SPECIES	1	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101.f	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000154891	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101.f	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Arctic ground squirrel	MODERN SPECIES	44	EEIG1 (ENSUPAG00010014600)	NAIF1 (ENSUPAG00010014612)	SLC25A25 (ENSUPAG00010014616)	PTGES2 (ENSUPAG00010014679)	LCN2 (ENSUPAG00010014701)	BBLN (ENSUPAG00010014717)	CIZ1 (ENSUPAG00010014739)	DNM1 (ENSUPAG00010015447)	ENSUPAG00010016029	SWI5 (ENSUPAG00010016170)	TRUB2 (ENSUPAG00010016176)	COQ4 (ENSUPAG00010016217)	SLC27A4 (ENSUPAG00010016225)	URM1 (ENSUPAG00010016241)	CERCAM (ENSUPAG00010016267)	ODF2 (ENSUPAG00010016297) ##22	GLE1 (ENSUPAG00010016717)	SPTAN1 (ENSUPAG00010016756)	ENSUPAG00010017643	DYNC2I2 (ENSUPAG00010017649)	ENSUPAG00010017660	PKN3 (ENSUPAG00010017678)	ZDHHC12 (ENSUPAG00010017701)	ZER1 (ENSUPAG00010017706)	TBC1D13 (ENSUPAG00010017721)	ENDOG (ENSUPAG00010017748)	SPOUT1 (ENSUPAG00010017751)	KYAT1 (ENSUPAG00010017771)	LRRC8A (ENSUPAG00010017850)	PHYHD1 (ENSUPAG00010017863)	DOLK (ENSUPAG00010017872)
Squirrel	MODERN SPECIES	87	EEIG1 (ENSSTOG00000003009)	NAIF1 (ENSSTOG00000007837)	SLC25A25 (ENSSTOG00000026316)	PTGES2 (ENSSTOG00000005312)	LCN2 (ENSSTOG00000025169)	ENSSTOG00000033639	BBLN (ENSSTOG00000022962)	DNM1 (ENSSTOG00000007980)	ENSSTOG00000012444	SWI5 (ENSSTOG00000023800)	ENSSTOG00000008024	COQ4 (ENSSTOG00000008034)	SLC27A4 (ENSSTOG00000025200)	URM1 (ENSSTOG00000025351)	CERCAM (ENSSTOG00000008102)	ODF2 (ENSSTOG00000008125) ##22	GLE1 (ENSSTOG00000010493)	SPTAN1 (ENSSTOG00000010508)	DYNC2I2 (ENSSTOG00000010534)	ENSSTOG00000010546	PKN3 (ENSSTOG00000010555)	ZDHHC12 (ENSSTOG00000010570)	ZER1 (ENSSTOG00000009393)	TBC1D13 (ENSSTOG00000000112)	ENDOG (ENSSTOG00000022690)	SPOUT1 (ENSSTOG00000015657)	KYAT1 (ENSSTOG00000026320)	LRRC8A (ENSSTOG00000002088)	PHYHD1 (ENSSTOG00000002098)	DOLK (ENSSTOG00000019536)	NUP188 (ENSSTOG00000002110)
Alpin marmot	MODERN SPECIES	47	EEIG1 (ENSMMMG00000017094)	NAIF1 (ENSMMMG00000017092)	SLC25A25 (ENSMMMG00000017081)	ENSMMMG00000017074	LCN2 (ENSMMMG00000017068)	ENSMMMG00000017066	CIZ1 (ENSMMMG00000016798)	DNM1 (ENSMMMG00000015538)	ENSMMMG00000015453	SWI5 (ENSMMMG00000015441)	TRUB2 (ENSMMMG00000015419)	COQ4 (ENSMMMG00000015414)	SLC27A4 (ENSMMMG00000015405)	URM1 (ENSMMMG00000015393)	CERCAM (ENSMMMG00000015367)	ODF2 (ENSMMMG00000014741) ##22	GLE1 (ENSMMMG00000014724)	ENSMMMG00000014716	SPTAN1 (ENSMMMG00000013757)	DYNC2I2 (ENSMMMG00000013692)	ENSMMMG00000013669	PKN3 (ENSMMMG00000013641)	ZDHHC12 (ENSMMMG00000013627)	ZER1 (ENSMMMG00000013601)	TBC1D13 (ENSMMMG00000013588)	ENDOG (ENSMMMG00000013572)	SPOUT1 (ENSMMMG00000013550)	KYAT1 (ENSMMMG00000013394)	LRRC8A (ENSMMMG00000013383)	PHYHD1 (ENSMMMG00000013375)	DOLK (ENSMMMG00000013371)
Eurasian red squirrel	MODERN SPECIES	6	EEIG1 (ENSSVLG00005015646)	NAIF1 (ENSSVLG00005015717)	SLC25A25 (ENSSVLG00005015830)	PTGES2 (ENSSVLG00005015937)	LCN2 (ENSSVLG00005015998)	ENSSVLG00005016033	CIZ1 (ENSSVLG00005016153)	DNM1 (ENSSVLG00005017313)	ENSSVLG00005017523	SWI5 (ENSSVLG00005017635)	TRUB2 (ENSSVLG00005017737)	COQ4 (ENSSVLG00005017850)	SLC27A4 (ENSSVLG00005017971)	URM1 (ENSSVLG00005018029)	CERCAM (ENSSVLG00005018107)	ODF2 (ENSSVLG00005018387) ##22	GLE1 (ENSSVLG00005018948)	ENSSVLG00005023763	DYNC2I2 (ENSSVLG00005023796)	ENSSVLG00005023905	PKN3 (ENSSVLG00005024092)	ZDHHC12 (ENSSVLG00005024113)	ZER1 (ENSSVLG00005024151)	TBC1D13 (ENSSVLG00005024185)	ENDOG (ENSSVLG00005024228)	SPOUT1 (ENSSVLG00005024260)	KYAT1 (ENSSVLG00005024316)	LRRC8A (ENSSVLG00005024426)	PHYHD1 (ENSSVLG00005024460)	DOLK (ENSSVLG00005024482)	NUP188 (ENSSVLG00005024536)
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT01050000244868.b.a.b.a	ENSGT01050000244868.b.a.b.b.a.a	ENSGT01050000244868.b.a.b.b.b	ENSGT01050000244868.b.a.a.a.a.a.a	ENSGT00940000164950	ENSGT00440000039084	ENSGT00390000001761	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	3	ENSHGLG00000044789	ENSHGLG00000013129	ENSHGLG00000036487	ENSHGLG00000039186	ENSHGLG00000012304	ENSHGLG00000012143	CIZ1 (ENSHGLG00000011900)	DNM1 (ENSHGLG00000012918)	ENSHGLG00000011778	ENSHGLG00000016708	ENSHGLG00000016715	COQ4 (ENSHGLG00000016696)	SLC27A4 (ENSHGLG00000016679)	URM1 (ENSHGLG00000036174)	CERCAM (ENSHGLG00000019176)	ENSHGLG00000016513 ##22	GLE1 (ENSHGLG00000016370)	SPTAN1 (ENSHGLG00000011313)	DYNC2I2 (ENSHGLG00000010447)	SET (ENSHGLG00000016319)	PKN3 (ENSHGLG00000016146)	ZDHHC12 (ENSHGLG00000043046)	ZER1 (ENSHGLG00000013217)	TBC1D13 (ENSHGLG00000012272)	ENSHGLG00000012087	ENDOG (ENSHGLG00000011977)	SPOUT1 (ENSHGLG00000011378)	ENSHGLG00000010822	ENSHGLG00000040009	ENSHGLG00000037099	LRRC8A (ENSHGLG00000014722)
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000033700	GPR123 (ENSHGLG00000032504)	ENSHGLG00000021099	ENSHGLG00000014102	ENSHGLG00000044778	INPP5A (ENSHGLG00000011306)	PWWP2B (ENSHGLG00000043379)	ENSHGLG00000046735	STK32C (ENSHGLG00000009808)	DPYSL4 (ENSHGLG00000012949)	JAKMIP3 (ENSHGLG00000018781)	ENSHGLG00000016646	ENSHGLG00000016574	ENSHGLG00000033671	TCERG1L (ENSHGLG00000014281)	ENSHGLG00000038454 ##22	GLRX3 (ENSHGLG00000016229)	ENSHGLG00000014516	EBF3 (ENSHGLG00000016339)	MGMT (ENSHGLG00000014053)	ENSHGLG00000039917	ENSHGLG00000021135	ENSHGLG00000046544	PTPRE (ENSHGLG00000015895)	CLRN3 (ENSHGLG00000010190)	FOXI2 (ENSHGLG00000010615)	NPS (ENSHGLG00000011458)	ENSHGLG00000046538	ENSHGLG00000017202	ENSHGLG00000015801	ENSHGLG00000043292
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a.b.a	ENSGT01050000244868.b.a.b.b.a.a	ENSGT01050000244868.b.a.b.b.b	ENSGT00440000039084	ENSGT00390000001761	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Guinea pig	MODERN SPECIES	27	ENSCPOG00000008902	ENSCPOG00000038271	ENSCPOG00000012525	ENSCPOG00000025560	ENSCPOG00000002704	BBLN (ENSCPOG00000039651)	CIZ1 (ENSCPOG00000006863)	DNM1 (ENSCPOG00000022899)	ENSCPOG00000002298	SWI5 (ENSCPOG00000032913)	TRUB2 (ENSCPOG00000013535)	COQ4 (ENSCPOG00000004566)	SLC27A4 (ENSCPOG00000004570)	URM1 (ENSCPOG00000039069)	CERCAM (ENSCPOG00000007664)	ODF2 (ENSCPOG00000007673) ##22	GLE1 (ENSCPOG00000004235)	SPTAN1 (ENSCPOG00000009432)	DYNC2I2 (ENSCPOG00000031445)	SET (ENSCPOG00000022617)	PKN3 (ENSCPOG00000013841)	ZDHHC12 (ENSCPOG00000022707)	ZER1 (ENSCPOG00000009341)	TBC1D13 (ENSCPOG00000015146)	ENDOG (ENSCPOG00000025286)	SPOUT1 (ENSCPOG00000004710)	KYAT1 (ENSCPOG00000021570)	LRRC8A (ENSCPOG00000004076)	PHYHD1 (ENSCPOG00000021159)	DOLK (ENSCPOG00000004082)	NUP188 (ENSCPOG00000004083)
Hystricomorpha_b	ANCESTRAL SPECIES	36						ENSGT00440000039084	ENSGT00390000001761	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Degu	MODERN SPECIES	164					ENSODEG00000017243	BBLN (ENSODEG00000017312)	CIZ1 (ENSODEG00000017392)	DNM1 (ENSODEG00000017540)	ENSODEG00000017315	SWI5 (ENSODEG00000017390)	TRUB2 (ENSODEG00000017292)	COQ4 (ENSODEG00000017322)	SLC27A4 (ENSODEG00000018007)	URM1 (ENSODEG00000017296)	CERCAM (ENSODEG00000017562)	ENSODEG00000017291 ##22	ENSODEG00000017232	GLE1 (ENSODEG00000017394)	SPTAN1 (ENSODEG00000017300)	DYNC2I2 (ENSODEG00000017068)	SET (ENSODEG00000017107)	PKN3 (ENSODEG00000016958)	ZDHHC12 (ENSODEG00000016995)	ZER1 (ENSODEG00000017759)	TBC1D13 (ENSODEG00000016965)	ENDOG (ENSODEG00000017274)	KYAT1 (ENSODEG00000016683)	LRRC8A (ENSODEG00000017019)	PHYHD1 (ENSODEG00000017108)	DOLK (ENSODEG00000020510)	NUP188 (ENSODEG00000017059)
Long-tailed chinchilla	MODERN SPECIES	277		ENSCLAG00000001202	ENSCLAG00000001260	ENSCLAG00000001469	ENSCLAG00000001508	CIZ1 (ENSCLAG00000001584)	BBLN (ENSCLAG00000001430)	DNM1 (ENSCLAG00000001608)	ENSCLAG00000002518	SWI5 (ENSCLAG00000001616)	TRUB2 (ENSCLAG00000001702)	COQ4 (ENSCLAG00000001766)	SLC27A4 (ENSCLAG00000001777)	URM1 (ENSCLAG00000001791)	CERCAM (ENSCLAG00000001818)	ODF2 (ENSCLAG00000001987) ##22	GLE1 (ENSCLAG00000001047)	SPTAN1 (ENSCLAG00000001091)	DYNC2I2 (ENSCLAG00000002947)	ENSCLAG00000003024	PKN3 (ENSCLAG00000003289)	ZDHHC12 (ENSCLAG00000003973)	ZER1 (ENSCLAG00000004427)	TBC1D13 (ENSCLAG00000005683)	ENDOG (ENSCLAG00000006402)	SPOUT1 (ENSCLAG00000006487)	KYAT1 (ENSCLAG00000001172)	LRRC8A (ENSCLAG00000001240)	PHYHD1 (ENSCLAG00000001266)	DOLK (ENSCLAG00000017527)	NUP188 (ENSCLAG00000001480)
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Kangaroo rat	MODERN SPECIES	374	Eeig1 (ENSDORG00000013337)	Naif1 (ENSDORG00000023751)	Slc25a25 (ENSDORG00000004321)	ENSDORG00000004322	ENSDORG00000013836	Bbln (ENSDORG00000023732)	Ciz1 (ENSDORG00000012341)	Dnm1 (ENSDORG00000016214)	Golga2 (ENSDORG00000016218)	Swi5 (ENSDORG00000016221)	Trub2 (ENSDORG00000016222)	Coq4 (ENSDORG00000016223)	Slc27a4 (ENSDORG00000016224)	Urm1 (ENSDORG00000028424)	Cercam (ENSDORG00000013368)	ENSDORG00000029642 ##22	Gle1 (ENSDORG00000012158)	ENSDORG00000023957	Dync2i2 (ENSDORG00000011867)	ENSDORG00000027815	Pkn3 (ENSDORG00000013496)	Zdhhc12 (ENSDORG00000013500)	Zer1 (ENSDORG00000013504)	Tbc1d13 (ENSDORG00000027055)	Endog (ENSDORG00000028893)	Spout1 (ENSDORG00000008670)	Kyat1 (ENSDORG00000008671)	Lrrc8a (ENSDORG00000008674)	Phyhd1 (ENSDORG00000016016)	Dolk (ENSDORG00000016017)	Nup188 (ENSDORG00000010867)
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000156811	ENSGT00450000040324.b	ENSGT00940000157207	ENSGT00390000000224	ENSGT01050000244868.b.a	ENSGT00390000001761	ENSGT00440000039084	ENSGT00940000155214	ENSGT00530000062932.d	ENSGT00390000009349	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000154891	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067
Muroidea	ANCESTRAL SPECIES	1	ENSGT00550000075041	ENSGT00940000160428	ENSGT00390000014476	ENSGT00940000159729	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00390000012207	ENSGT00940000156235	ENSGT00940000163383	ENSGT01090000260597	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000154891	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000160428	ENSGT00390000014476	ENSGT00940000159729	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00390000012207	ENSGT00940000156235	ENSGT00940000163383	ENSGT01090000260597	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT00960000190071	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Cricetidae	ANCESTRAL SPECIES	12	ENSGT00940000160428	ENSGT00390000014476	ENSGT00940000159729	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00390000012207	ENSGT00940000156235	ENSGT00940000163383	ENSGT01090000260597	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT00960000190071	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT00940000160428	ENSGT00390000014476	ENSGT00940000159729	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00390000012207	ENSGT00940000156235	ENSGT00940000163383	ENSGT01090000260597	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT00960000190071	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Northern American deer mouse	MODERN SPECIES	17	ENSPEMG00000025570	Cfap77 (ENSPEMG00000013789)	Ttf1 (ENSPEMG00000012727)	Setx (ENSPEMG00000000875)	Ntng2 (ENSPEMG00000011411)	Med27 (ENSPEMG00000009323)	Rapgef1 (ENSPEMG00000016265)	Gm13420 (ENSPEMG00000011970)	ENSPEMG00000018841	Trub2 (ENSPEMG00000017893)	Coq4 (ENSPEMG00000012677)	Slc27a4 (ENSPEMG00000008880)	Urm1 (ENSPEMG00000024350)	ENSPEMG00000027904	Cercam (ENSPEMG00000010584)	Odf2 (ENSPEMG00000017544) ##22	ENSPEMG00000011251	Sptan1 (ENSPEMG00000016609)	Dync2i2 (ENSPEMG00000009337)	Set (ENSPEMG00000017351)	Pkn3 (ENSPEMG00000018700)	Zdhhc12 (ENSPEMG00000016258)	Zer1 (ENSPEMG00000012817)	ENSPEMG00000028798	Tbc1d13 (ENSPEMG00000012254)	Endog (ENSPEMG00000011395)	Spout1 (ENSPEMG00000009348)	Kyat1 (ENSPEMG00000010986)	Lrrc8a (ENSPEMG00000014647)	Phyhd1 (ENSPEMG00000010572)	Dolk (ENSPEMG00000007139)
Prairie vole	MODERN SPECIES	12	Barhl1 (ENSMOCG00000013749)	Cfap77 (ENSMOCG00000010524)	Ttf1 (ENSMOCG00000022131)	Setx (ENSMOCG00000000848)	Ntng2 (ENSMOCG00000007465)	Med27 (ENSMOCG00000001125)	ENSMOCG00000001471	Rapgef1 (ENSMOCG00000003434)	Gm13420 (ENSMOCG00000016999)	ENSMOCG00000013759	Trub2 (ENSMOCG00000014291)	Coq4 (ENSMOCG00000016657)	Slc27a4 (ENSMOCG00000009385)	Urm1 (ENSMOCG00000007365)	Cercam (ENSMOCG00000019610)	Odf2 (ENSMOCG00000014613) ##22	Gle1 (ENSMOCG00000014845)	Sptan1 (ENSMOCG00000012343)	Dync2i2 (ENSMOCG00000000668)	ENSMOCG00000011320	Pkn3 (ENSMOCG00000021624)	Zdhhc12 (ENSMOCG00000004344)	Zer1 (ENSMOCG00000012943)	Tbc1d13 (ENSMOCG00000022556)	Endog (ENSMOCG00000010842)	ENSMOCG00000002315	Kyat1 (ENSMOCG00000021586)	Lrrc8a (ENSMOCG00000014593)	Phyhd1 (ENSMOCG00000009846)	Dolk (ENSMOCG00000002814)	Nup188 (ENSMOCG00000010171)
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00550000075041	ENSGT00940000160428	ENSGT00390000014476	ENSGT00940000159729	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00390000012207	ENSGT00940000156235	ENSGT00940000163383	ENSGT01090000260597	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877.h.b	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Chinese hamster chok1gshd	MODERN SPECIES	188	Ddx31 (ENSCGRG00001014191)	Barhl1 (ENSCGRG00001022242)	Cfap77 (ENSCGRG00001023845)	Ttf1 (ENSCGRG00001024020)	Setx (ENSCGRG00001000907)	Ntng2 (ENSCGRG00001020557)	Med27 (ENSCGRG00001021730)	Rapgef1 (ENSCGRG00001020836)	Gm13420 (ENSCGRG00001019828)	ENSCGRG00001020194	Trub2 (ENSCGRG00001024441)	Coq4 (ENSCGRG00001024557)	Slc27a4 (ENSCGRG00001023356)	Urm1 (ENSCGRG00001023888)	Cercam (ENSCGRG00001018468)	Odf2 (ENSCGRG00001020087) ##22	ENSCGRG00001023522	Sptan1 (ENSCGRG00001010754)	ENSCGRG00001002900	ENSCGRG00001020955	Dync2i2 (ENSCGRG00001019053)	ENSCGRG00001001629	Pkn3 (ENSCGRG00001005515)	Zdhhc12 (ENSCGRG00001013072)	Zer1 (ENSCGRG00001011706)	Tbc1d13 (ENSCGRG00001002371)	Spout1 (ENSCGRG00001022370)	Endog (ENSCGRG00001024006)	Kyat1 (ENSCGRG00001023967)	Lrrc8a (ENSCGRG00001000796)	Phyhd1 (ENSCGRG00001022088)
Golden Hamster	MODERN SPECIES	809							ENSMAUG00000015488	Rapgef1 (ENSMAUG00000012266)	Gm13420 (ENSMAUG00000020023)	ENSMAUG00000021606	Trub2 (ENSMAUG00000010403)	Coq4 (ENSMAUG00000020901)	Slc27a4 (ENSMAUG00000014561)	Urm1 (ENSMAUG00000000479)	Cercam (ENSMAUG00000015598)	Odf2 (ENSMAUG00000015398) ##22	Gle1 (ENSMAUG00000022138)	Sptan1 (ENSMAUG00000010972)	Dync2i2 (ENSMAUG00000020469)	Pkn3 (ENSMAUG00000014746)	Zdhhc12 (ENSMAUG00000020895)	ENSMAUG00000012662	Tbc1d13 (ENSMAUG00000017508)	Endog (ENSMAUG00000015619)	Spout1 (ENSMAUG00000021158)	Kyat1 (ENSMAUG00000019437)	Lrrc8a (ENSMAUG00000012895)	Phyhd1 (ENSMAUG00000018614)	Dolk (ENSMAUG00000008066)	Nup188 (ENSMAUG00000008082)	Sh3glb2 (ENSMAUG00000017931)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000160428	ENSGT00390000014476	ENSGT00940000159729	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00390000012207	ENSGT00940000156235	ENSGT00940000163383	ENSGT01090000260597	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT00960000190071	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903.o	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Mus	ANCESTRAL SPECIES	1	ENSGT00940000160428	ENSGT00390000014476	ENSGT00940000159729	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00390000012207	ENSGT00940000156235	ENSGT00940000163383	ENSGT01090000260597	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT00960000190071	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903.o	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A	ENSGT00390000006287	ENSGT01070000256473	ENSGT00390000004067
Mus_A	ANCESTRAL SPECIES		ENSGT00940000160428	ENSGT00390000014476	ENSGT00940000159729	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00390000012207	ENSGT00940000156235	ENSGT00940000163383	ENSGT01090000260597	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT00960000190071	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903.o	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A.c.b	ENSGT00390000006287	ENSGT01070000256473	ENSGT00390000004067
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000160428	ENSGT00390000014476	ENSGT00940000159729	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00390000012207	ENSGT00940000156235	ENSGT00940000163383	ENSGT01090000260597	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT00960000190071	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903.o	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A.c.b	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Mouse	MODERN SPECIES	11	Gtf3c4 (ENSMUSG00000035666)	Ddx31 (ENSMUSG00000026806)	Barhl1 (ENSMUSG00000026805)	Cfap77 (ENSMUSG00000079502)	Ttf1 (ENSMUSG00000026803)	Setx (ENSMUSG00000043535)	Ntng2 (ENSMUSG00000035513)	Med27 (ENSMUSG00000026799)	Rapgef1 (ENSMUSG00000039844)	Gm13420 (ENSMUSG00000079497)	Trub2 (ENSMUSG00000039826)	Coq4 (ENSMUSG00000026798)	Slc27a4 (ENSMUSG00000059316)	Urm1 (ENSMUSG00000069020)	Cercam (ENSMUSG00000039787)	Odf2 (ENSMUSG00000026790) ##22	Gle1 (ENSMUSG00000019715)	Sptan1 (ENSMUSG00000057738)	Dync2i2 (ENSMUSG00000039715)	Set (ENSMUSG00000054766)	Pkn3 (ENSMUSG00000026785)	Zdhhc12 (ENSMUSG00000015335)	Zer1 (ENSMUSG00000039686)	Tbc1d13 (ENSMUSG00000039678)	Endog (ENSMUSG00000015337)	Spout1 (ENSMUSG00000039660)	Kyat1 (ENSMUSG00000039648)	Lrrc8a (ENSMUSG00000007476)	Phyhd1 (ENSMUSG00000079484)	Dolk (ENSMUSG00000075419)	Nup188 (ENSMUSG00000052533)
Mus_C	ANCESTRAL SPECIES		ENSGT00940000160428	ENSGT00390000014476	ENSGT00940000159729	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00390000012207	ENSGT00940000156235	ENSGT00940000163383	ENSGT01090000260597	ENSGT00940000156773	ENSGT00390000003828	ENSGT00940000158646	ENSGT00390000005101	ENSGT00960000190071	ENSGT01030000234558.D.a	ENSGT00530000063497.a ##22	ENSGT00390000012903.o	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891	ENSGT00940000161818	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A.c.b	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Steppe mouse	MODERN SPECIES	2944		Cfap77 (ENSMSIG00000010110)	Ttf1 (ENSMSIG00000010070)	Setx (ENSMSIG00000009986)	Ntng2 (ENSMSIG00000009805)	Med27 (ENSMSIG00000009748)	Rapgef1 (ENSMSIG00000009443)	Gm13420 (ENSMSIG00000009424)	ENSMSIG00000009394	Trub2 (ENSMSIG00000009303)	Coq4 (ENSMSIG00000009264)	Slc27a4 (ENSMSIG00000009228)	ENSMSIG00000009200	ENSMSIG00000009186	Cercam (ENSMSIG00000009108)	Odf2 (ENSMSIG00000008211) ##22	ENSMSIG00000008176	Gle1 (ENSMSIG00000008134)	Sptan1 (ENSMSIG00000005300)	Dync2i2 (ENSMSIG00000005195)	ENSMSIG00000005123	Pkn3 (ENSMSIG00000005062)	Zdhhc12 (ENSMSIG00000005028)	Zer1 (ENSMSIG00000004937)	Tbc1d13 (ENSMSIG00000004898)	ENSMSIG00000004892	Endog (ENSMSIG00000004884)	Spout1 (ENSMSIG00000004854)	Kyat1 (ENSMSIG00000004284)	Lrrc8a (ENSMSIG00000004237)	Phyhd1 (ENSMSIG00000004133)
spretus	MODERN SPECIES	11	Gtf3c4 (MGP_SPRETEiJ_G0024276)	Ddx31 (MGP_SPRETEiJ_G0024277)	Barhl1 (MGP_SPRETEiJ_G0024278)	Cfap77 (MGP_SPRETEiJ_G0024279)	Ttf1 (MGP_SPRETEiJ_G0024280)	Setx (MGP_SPRETEiJ_G0024281)	Ntng2 (MGP_SPRETEiJ_G0024282)	Med27 (MGP_SPRETEiJ_G0024283)	Rapgef1 (MGP_SPRETEiJ_G0024284)	MGP_SPRETEiJ_G0024285	Trub2 (MGP_SPRETEiJ_G0024286)	Coq4 (MGP_SPRETEiJ_G0024287)	Slc27a4 (MGP_SPRETEiJ_G0024288)	Urm1 (MGP_SPRETEiJ_G0024289)	Cercam (MGP_SPRETEiJ_G0024290)	Odf2 (MGP_SPRETEiJ_G0024291) ##22	Gle1 (MGP_SPRETEiJ_G0024292)	Sptan1 (MGP_SPRETEiJ_G0024293)	Dync2i2 (MGP_SPRETEiJ_G0024294)	MGP_SPRETEiJ_G0024295	Pkn3 (MGP_SPRETEiJ_G0024296)	Zdhhc12 (MGP_SPRETEiJ_G0024297)	Zer1 (MGP_SPRETEiJ_G0024298)	Tbc1d13 (MGP_SPRETEiJ_G0024299)	Endog (MGP_SPRETEiJ_G0024300)	Spout1 (MGP_SPRETEiJ_G0024301)	Kyat1 (MGP_SPRETEiJ_G0024302)	Lrrc8a (MGP_SPRETEiJ_G0024303)	MGP_SPRETEiJ_G0024304	Phyhd1 (MGP_SPRETEiJ_G0024305)	MGP_SPRETEiJ_G0024306
Ryukyu mouse	MODERN SPECIES	11	Gtf3c4 (MGP_CAROLIEiJ_G0023359)	Ddx31 (MGP_CAROLIEiJ_G0023360)	Barhl1 (MGP_CAROLIEiJ_G0023361)	Cfap77 (MGP_CAROLIEiJ_G0023362)	Ttf1 (MGP_CAROLIEiJ_G0023363)	Setx (MGP_CAROLIEiJ_G0023364)	Ntng2 (MGP_CAROLIEiJ_G0023365)	Med27 (MGP_CAROLIEiJ_G0023366)	Rapgef1 (MGP_CAROLIEiJ_G0023367)	Trub2 (MGP_CAROLIEiJ_G0023368)	MGP_CAROLIEiJ_G0023369	Coq4 (MGP_CAROLIEiJ_G0023370)	Slc27a4 (MGP_CAROLIEiJ_G0023371)	Urm1 (MGP_CAROLIEiJ_G0023372)	Cercam (MGP_CAROLIEiJ_G0023373)	Odf2 (MGP_CAROLIEiJ_G0023374) ##22	Gle1 (MGP_CAROLIEiJ_G0023375)	Sptan1 (MGP_CAROLIEiJ_G0023376)	Dync2i2 (MGP_CAROLIEiJ_G0023377)	MGP_CAROLIEiJ_G0023378	Pkn3 (MGP_CAROLIEiJ_G0023379)	Zdhhc12 (MGP_CAROLIEiJ_G0023380)	Zer1 (MGP_CAROLIEiJ_G0023381)	Tbc1d13 (MGP_CAROLIEiJ_G0023382)	Endog (MGP_CAROLIEiJ_G0023383)	Spout1 (MGP_CAROLIEiJ_G0023384)	Kyat1 (MGP_CAROLIEiJ_G0023385)	MGP_CAROLIEiJ_G0023386	Lrrc8a (MGP_CAROLIEiJ_G0023387)	Phyhd1 (MGP_CAROLIEiJ_G0023388)	MGP_CAROLIEiJ_G0023389
Shrew mouse	MODERN SPECIES	16	Gtf3c4 (MGP_PahariEiJ_G0024816)	Ddx31 (MGP_PahariEiJ_G0024817)	Barhl1 (MGP_PahariEiJ_G0024818)	Cfap77 (MGP_PahariEiJ_G0024819)	MGP_PahariEiJ_G0024820	Setx (MGP_PahariEiJ_G0024821)	Ntng2 (MGP_PahariEiJ_G0024822)	Med27 (MGP_PahariEiJ_G0024823)	Rapgef1 (MGP_PahariEiJ_G0024824)	MGP_PahariEiJ_G0024825	Trub2 (MGP_PahariEiJ_G0024826)	Coq4 (MGP_PahariEiJ_G0024827)	Slc27a4 (MGP_PahariEiJ_G0024828)	Urm1 (MGP_PahariEiJ_G0024829)	Cercam (MGP_PahariEiJ_G0024830)	Odf2 (MGP_PahariEiJ_G0024831) ##22	Gle1 (MGP_PahariEiJ_G0024832)	Sptan1 (MGP_PahariEiJ_G0024833)	Dync2i2 (MGP_PahariEiJ_G0024834)	MGP_PahariEiJ_G0024835	Pkn3 (MGP_PahariEiJ_G0024836)	Zdhhc12 (MGP_PahariEiJ_G0024837)	Zer1 (MGP_PahariEiJ_G0024838)	Tbc1d13 (MGP_PahariEiJ_G0024839)	Endog (MGP_PahariEiJ_G0024840)	Spout1 (MGP_PahariEiJ_G0024841)	Kyat1 (MGP_PahariEiJ_G0024842)	MGP_PahariEiJ_G0024843	MGP_PahariEiJ_G0024844	Phyhd1 (MGP_PahariEiJ_G0024845)	MGP_PahariEiJ_G0024846
Rat	MODERN SPECIES	13	Ddx31 (ENSRNOG00000013040)	Barhl1 (ENSRNOG00000013209)	Cfap77 (ENSRNOG00000028805)	Ttf1 (ENSRNOG00000039777)	Setx (ENSRNOG00000013491)	Ntng2 (ENSRNOG00000013694)	Med27 (ENSRNOG00000013933)	Rapgef1 (ENSRNOG00000014316)	Prrt1b (ENSRNOG00000046655)	LOC102547011 (ENSRNOG00000050262)	Trub2 (ENSRNOG00000043189)	Coq4 (ENSRNOG00000026691)	Slc27a4 (ENSRNOG00000014369)	Cercam (ENSRNOG00000026604)	AC114363.1 (ENSRNOG00000057545)	Odf2 (ENSRNOG00000014584) ##22	Gle1 (ENSRNOG00000015237)	Sptan1 (ENSRNOG00000015396)	Dync2i2 (ENSRNOG00000015636)	Set (ENSRNOG00000025892)	Zdhhc12 (ENSRNOG00000015791)	Zer1 (ENSRNOG00000025832)	Tbc1d13 (ENSRNOG00000015970)	ENSRNOG00000067313	Endog (ENSRNOG00000016033)	Spout1 (ENSRNOG00000025711)	Kyat1 (ENSRNOG00000016097)	Lrrc8a (ENSRNOG00000025296)	Phyhd1 (ENSRNOG00000016794)	Dolk (ENSRNOG00000016989)	Nup188 (ENSRNOG00000025185)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1249	Ddx31 (ENSNGAG00000020928)	Barhl1 (ENSNGAG00000013497)	Cfap77 (ENSNGAG00000012081)	ENSNGAG00000017385	Ntng2 (ENSNGAG00000000374)	Med27 (ENSNGAG00000001480)	Rapgef1 (ENSNGAG00000015271)	Gm13420 (ENSNGAG00000012226)	ENSNGAG00000019768	Trub2 (ENSNGAG00000018679)	Coq4 (ENSNGAG00000000970)	Slc27a4 (ENSNGAG00000000290)	ENSNGAG00000015563 ##37	Urm1 (ENSNGAG00000007112)	Cercam (ENSNGAG00000020179)	Odf2 (ENSNGAG00000019109) ##22	Gle1 (ENSNGAG00000010816)	Sptan1 (ENSNGAG00000016852)	Dync2i2 (ENSNGAG00000020218)	ENSNGAG00000017635	Pkn3 (ENSNGAG00000005915)	Zdhhc12 (ENSNGAG00000000306)	Zer1 (ENSNGAG00000010627)	Tbc1d13 (ENSNGAG00000010572)	Endog (ENSNGAG00000020601)	Spout1 (ENSNGAG00000000907)	Kyat1 (ENSNGAG00000007585)
Lesser Egyptian jerboa	MODERN SPECIES	213	Eeig1 (ENSJJAG00000015470)	Naif1 (ENSJJAG00000014845)	Slc25a25 (ENSJJAG00000019085)	Ptges2 (ENSJJAG00000016746)	ENSJJAG00000015814	Bbln (ENSJJAG00000015624)	ENSJJAG00000015415	Dnm1 (ENSJJAG00000003497)	Golga2 (ENSJJAG00000006051)	ENSJJAG00000021338	Trub2 (ENSJJAG00000019181)	ENSJJAG00000018147	Slc27a4 (ENSJJAG00000015783)	ENSJJAG00000014799	Cercam (ENSJJAG00000013007)	Odf2 (ENSJJAG00000020205) ##22	ENSJJAG00000018544	Gle1 (ENSJJAG00000021252)	Sptan1 (ENSJJAG00000009750)	Dync2i2 (ENSJJAG00000016517)	ENSJJAG00000021459	Pkn3 (ENSJJAG00000019697)	Zdhhc12 (ENSJJAG00000019229)	Zer1 (ENSJJAG00000018996)	Tbc1d13 (ENSJJAG00000018509)
Anura	ANCESTRAL SPECIES	38							ENSGT01030000234558.D.a	ENSGT00390000005101	ENSGT00940000158646	ENSGT00390000009349	ENSGT00530000062932	ENSGT00940000155214	ENSGT00440000039084	ENSGT00390000001761	ENSGT00390000000224	ENSGT00530000063497.a ##22	ENSGT00390000012903	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000153877	ENSGT00940000154990.d	ENSGT00940000156902	ENSGT00530000063187.A	ENSGT00940000158674	ENSGT00940000160987	ENSGT00390000016537	ENSGT00940000158797	ENSGT00940000154043.A.h	ENSGT00390000006287	ENSGT00390000004067	ENSGT00390000005742
Frog	MODERN SPECIES	8	bgn (ENSXETG00000012934)	ecm2.2 (ENSXETG00000012932)	ENSXETG00000046713	dnase1 (ENSXETG00000012928)	golga2 (ENSXETG00000012915)	kyat1 (ENSXETG00000012909)	lrrc8a (ENSXETG00000012899)	phyhd1 (ENSXETG00000012919)	dolk (ENSXETG00000024754)	nup188 (ENSXETG00000012903)	sh3glb2 (ENSXETG00000012895)	ptges2 (ENSXETG00000012893)	bbln (ENSXETG00000035874)	ciz1 (ENSXETG00000036757)	dnm1 (ENSXETG00000024756)	odf2 (ENSXETG00000024758) ##22	gle1 (ENSXETG00000006584)	sptan1 (ENSXETG00000012869)	dync2i2 (ENSXETG00000012889)	set (ENSXETG00000012863)	pkn3 (ENSXETG00000012867)	zer1 (ENSXETG00000012865)	tbc1d13 (ENSXETG00000032711)	fnbp1 (ENSXETG00000012848)	usp20 (ENSXETG00000012844)	c9orf78 (ENSXETG00000012840)	tor1a (ENSXETG00000012843)	tor1b (ENSXETG00000023595)	ENSXETG00000043744	ptges (ENSXETG00000014173)	prrx2 (ENSXETG00000014169)
Leishan spiny toad	MODERN SPECIES	12	SEPHS2 (ENSLLEG00000015607)	INVS (ENSLLEG00000016022)	UBL4A (ENSLLEG00000016036)	ENSLLEG00000016081	ENSLLEG00000016194	CERCAM (ENSLLEG00000016257)	URM1 (ENSLLEG00000016442)	ENSLLEG00000016669	SLC27A4 (ENSLLEG00000016704)	SWI5 (ENSLLEG00000016918)	ENSLLEG00000017018	DNM1 (ENSLLEG00000017784)	ENSLLEG00000019284	ENSLLEG00000019593	PTGES2 (ENSLLEG00000019637)	ODF2 (ENSLLEG00000019754) ##22	GLE1 (ENSLLEG00000020128)	SPTAN1 (ENSLLEG00000023189)	DYNC2I2 (ENSLLEG00000027505)	SET (ENSLLEG00000027817)	ENSLLEG00000028035	ZDHHC12 (ENSLLEG00000028511)	ZER1 (ENSLLEG00000028562)	TBC1D13 (ENSLLEG00000028812)	ENDOG (ENSLLEG00000028950)	SPOUT1 (ENSLLEG00000028985)	KYAT1 (ENSLLEG00000029041)	LRRC8A (ENSLLEG00000029088)	ENSLLEG00000029100	PHYHD1 (ENSLLEG00000029123)	DOLK (ENSLLEG00000029211)
Coelacanth	MODERN SPECIES	338					TTF1 (ENSLACG00000001851)	CFAP77 (ENSLACG00000022576)	BARHL1 (ENSLACG00000006792)	DDX31 (ENSLACG00000008136)	GTF3C4 (ENSLACG00000008776)	ENSLACG00000009081	SPACA9 (ENSLACG00000011271)	TSC1 (ENSLACG00000011402)	GFI1B (ENSLACG00000012207)	bbln (ENSLACG00000012936)	PTGES2 (ENSLACG00000012945)	ODF2 (ENSLACG00000013067) ##22	GLE1 (ENSLACG00000013535)	SPTAN1 (ENSLACG00000013823)	DYNC2I2 (ENSLACG00000014551)	SET (ENSLACG00000014738)	si:ch211-51h9.7 (ENSLACG00000014842)	ENSLACG00000014875	ZDHHC12 (ENSLACG00000015022)	ENSLACG00000015090	ZER1 (ENSLACG00000015169)	TBC1D13 (ENSLACG00000015372)	ENDOG (ENSLACG00000015490)	SPOUT1 (ENSLACG00000015521)	KYAT1 (ENSLACG00000015602)	LRRC8A (ENSLACG00000015799)	PHYHD1 (ENSLACG00000015929)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00530000063497 #22
Hagfish	MODERN SPECIES	1327	ENSEBUG00000000755	prdm12b (ENSEBUG00000016780)	ENSEBUG00000009841	ENSEBUG00000003664	ENSEBUG00000015535	ENSEBUG00000002431	ENSEBUG00000014367	ENSEBUG00000006725	ENSEBUG00000010674	ENSEBUG00000010763	ENSEBUG00000011295	ENSEBUG00000002893	ENSEBUG00000015941	ENSEBUG00000001621	ENSEBUG00000014944	ENSEBUG00000016820 #22	ENSEBUG00000008005	ENSEBUG00000006383	ENSEBUG00000008794	ENSEBUG00000002769	ENSEBUG00000003218
Ciona	ANCESTRAL SPECIES	1084																ENSGT00530000063497 #22	ENSGT00390000006425
Ciona intestinalis	MODERN SPECIES	567									ENSCING00000000473	ENSCING00000000485	ENSCING00000000504	ENSCING00000000509	ENSCING00000016596	ENSCING00000023086	ENSCING00000016592	ENSCING00000000511 #22	ENSCING00000000512
Ciona savignyi	MODERN SPECIES	263	ENSCSAVG00000009366	ENSCSAVG00000009374	ENSCSAVG00000009408	ENSCSAVG00000009412	ENSCSAVG00000009415	ENSCSAVG00000009424	ENSCSAVG00000009428	ENSCSAVG00000009435	ENSCSAVG00000009438	ENSCSAVG00000009443	ENSCSAVG00000009458	ENSCSAVG00000009460	ENSCSAVG00000009464	ENSCSAVG00000009488	ENSCSAVG00000009503	ENSCSAVG00000009504 #22	ENSCSAVG00000009527	ENSCSAVG00000009530	ENSCSAVG00000009545	ENSCSAVG00000009569	ENSCSAVG00000009589	ENSCSAVG00000009591	ENSCSAVG00000009594	ENSCSAVG00000009596	ENSCSAVG00000009602	ENSCSAVG00000009608	ENSCSAVG00000009614	ENSCSAVG00000009619	ENSCSAVG00000009664	ENSCSAVG00000009715	ENSCSAVG00000009723