Murinae	ANCESTRAL SPECIES	1	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891	ENSGT00940000161818 #8	ENSGT00940000156902 #9	ENSGT00530000063187.A #10	ENSGT00940000158674 #11	ENSGT00940000160987 #12	ENSGT00390000016537 #13	ENSGT00940000158797 #14	ENSGT00940000154043.A #16	ENSGT00390000006287 #17	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a #26	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #34	ENSGT00950000182888.a.a.a.j.b #33	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Mus	ANCESTRAL SPECIES	1	ENSGT00940000158483	ENSGT00940000154891	ENSGT00940000161818 #8	ENSGT00940000156902 #9	ENSGT00530000063187.A #10	ENSGT00940000158674 #11	ENSGT00940000160987 #12	ENSGT00390000016537 #13	ENSGT00940000158797 #14	ENSGT00940000154043.A #16	ENSGT00390000006287 #17	ENSGT01070000256473	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a #26	ENSGT00860000135997 #27	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #34	ENSGT00950000182888.a.a.a.j.b #33	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Mus_A	ANCESTRAL SPECIES		ENSGT00940000158483	ENSGT00940000154891	ENSGT00940000161818 #8	ENSGT00940000156902 #9	ENSGT00530000063187.A #10	ENSGT00940000158674 #11	ENSGT00940000160987 #12	ENSGT00390000016537 #13	ENSGT00940000158797 #14	ENSGT00940000154043.A.c.b #15	ENSGT00390000006287 #17	ENSGT01070000256473	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a #26	ENSGT00860000135997 #27	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #34	ENSGT00950000182888.a.a.a.j.b #33	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891	ENSGT00940000161818 #8	ENSGT00940000156902 #9	ENSGT00530000063187.A #10	ENSGT00940000158674 #11	ENSGT00940000160987 #12	ENSGT00390000016537 #13	ENSGT00940000158797 #14	ENSGT00940000154043.A.c.b #15	ENSGT00390000006287 #17	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a #26	ENSGT00860000135997 #27	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #34	ENSGT00950000182888.a.a.a.j.b #33	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Mus_C	ANCESTRAL SPECIES		ENSGT00940000156662.d	ENSGT00940000158483	ENSGT00940000154891	ENSGT00940000161818 #8	ENSGT00940000156902 #9	ENSGT00530000063187.A #10	ENSGT00940000158674 #11	ENSGT00940000160987 #12	ENSGT00390000016537 #13	ENSGT00940000158797 #14	ENSGT00940000154043.A.c.b #15	ENSGT00390000006287 #17	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a #26	ENSGT00860000135997 #27	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #34	ENSGT00950000182888.a.a.a.j.b #33	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
spretus	MODERN SPECIES	11	MGP_SPRETEiJ_G0024295 #7	Pkn3 (MGP_SPRETEiJ_G0024296) #8	Zdhhc12 (MGP_SPRETEiJ_G0024297) #9	Zer1 (MGP_SPRETEiJ_G0024298) #10	Tbc1d13 (MGP_SPRETEiJ_G0024299) #11	Endog (MGP_SPRETEiJ_G0024300) #12	Spout1 (MGP_SPRETEiJ_G0024301) #13	Kyat1 (MGP_SPRETEiJ_G0024302) #14	Lrrc8a (MGP_SPRETEiJ_G0024303) #15	MGP_SPRETEiJ_G0024304 #16	Phyhd1 (MGP_SPRETEiJ_G0024305) #17	MGP_SPRETEiJ_G0024306 #18	Dolk (MGP_SPRETEiJ_G0024307) #19	Nup188 (MGP_SPRETEiJ_G0024308) #20	Sh3glb2 (MGP_SPRETEiJ_G0024309) #21	Miga2 (MGP_SPRETEiJ_G0024310) #22	Dolpp1 (MGP_SPRETEiJ_G0024311) #23	Crat (MGP_SPRETEiJ_G0024312) #24	Ptpa (MGP_SPRETEiJ_G0024313) #25	Ier5l (MGP_SPRETEiJ_G0024314) #26	Cstad (MGP_SPRETEiJ_G0024315) #27	1700001O22Rik (MGP_SPRETEiJ_G0024316) #28	Ntmt1 (MGP_SPRETEiJ_G0024317) #29	Asb6 (MGP_SPRETEiJ_G0024318) #30	Prrx2 (MGP_SPRETEiJ_G0024319) #31	Ptges (MGP_SPRETEiJ_G0024320) #32	Tor1a (MGP_SPRETEiJ_G0024321) #33	Tor1b (MGP_SPRETEiJ_G0024322) #34	BC005624 (MGP_SPRETEiJ_G0024323) #35	Usp20 (MGP_SPRETEiJ_G0024324) #36	Fnbp1 (MGP_SPRETEiJ_G0024325) #37
Steppe mouse	MODERN SPECIES	2944	Dync2i2 (ENSMSIG00000005195)	ENSMSIG00000005123	Pkn3 (ENSMSIG00000005062) #8	Zdhhc12 (ENSMSIG00000005028) #9	Zer1 (ENSMSIG00000004937) #10	Tbc1d13 (ENSMSIG00000004898) #11	ENSMSIG00000004892	Endog (ENSMSIG00000004884) #12	Spout1 (ENSMSIG00000004854) #13	Kyat1 (ENSMSIG00000004284) #14	Lrrc8a (ENSMSIG00000004237) ##16	Phyhd1 (ENSMSIG00000004133) #17	Dolk (ENSMSIG00000004119) #19	Nup188 (ENSMSIG00000003905) #20	Sh3glb2 (ENSMSIG00000003753) #21	Miga2 (ENSMSIG00000003682) #22	Dolpp1 (ENSMSIG00000003579) #23
Mouse	MODERN SPECIES	11	Sptan1 (ENSMUSG00000057738)	Dync2i2 (ENSMUSG00000039715)	Set (ENSMUSG00000054766)	Pkn3 (ENSMUSG00000026785) #8	Zdhhc12 (ENSMUSG00000015335) #9	Zer1 (ENSMUSG00000039686) #10	Tbc1d13 (ENSMUSG00000039678) #11	Endog (ENSMUSG00000015337) #12	Spout1 (ENSMUSG00000039660) #13	Kyat1 (ENSMUSG00000039648) #14	Lrrc8a (ENSMUSG00000007476) #15	Phyhd1 (ENSMUSG00000079484) #17	Dolk (ENSMUSG00000075419) #19	Nup188 (ENSMUSG00000052533) #20	Sh3glb2 (ENSMUSG00000026860) #21	Miga2 (ENSMUSG00000026858) #22	Dolpp1 (ENSMUSG00000026856) #23	Crat (ENSMUSG00000026853) #24	Ptpa (ENSMUSG00000039515) #25	Ier5l (ENSMUSG00000089762) #26	Cstad (ENSMUSG00000047363) #27	1700001O22Rik (ENSMUSG00000044320) #28	Ntmt1 (ENSMUSG00000026857) #29	Asb6 (ENSMUSG00000039483) #30	Prrx2 (ENSMUSG00000039476) #31	Ptges (ENSMUSG00000050737) #32	Tor1b (ENSMUSG00000026848) #34	Tor1a (ENSMUSG00000026849) #33	BC005624 (ENSMUSG00000026851) #35	Usp20 (ENSMUSG00000026854) #36	Fnbp1 (ENSMUSG00000075415) #37
Ryukyu mouse	MODERN SPECIES	11	MGP_CAROLIEiJ_G0023378 #7	Pkn3 (MGP_CAROLIEiJ_G0023379) #8	Zdhhc12 (MGP_CAROLIEiJ_G0023380) #9	Zer1 (MGP_CAROLIEiJ_G0023381) #10	Tbc1d13 (MGP_CAROLIEiJ_G0023382) #11	Endog (MGP_CAROLIEiJ_G0023383) #12	Spout1 (MGP_CAROLIEiJ_G0023384) #13	Kyat1 (MGP_CAROLIEiJ_G0023385) #14	MGP_CAROLIEiJ_G0023386 #16	Lrrc8a (MGP_CAROLIEiJ_G0023387) #15	Phyhd1 (MGP_CAROLIEiJ_G0023388) #17	MGP_CAROLIEiJ_G0023389	Dolk (MGP_CAROLIEiJ_G0023390) #19	MGP_CAROLIEiJ_G0023391 #20	Sh3glb2 (MGP_CAROLIEiJ_G0023392) #21	Miga2 (MGP_CAROLIEiJ_G0023393) #22	Dolpp1 (MGP_CAROLIEiJ_G0023394) #23	Crat (MGP_CAROLIEiJ_G0023395) #24	Ptpa (MGP_CAROLIEiJ_G0023396) #25	Ier5l (MGP_CAROLIEiJ_G0023397) #26	Cstad (MGP_CAROLIEiJ_G0023398) #27	1700001O22Rik (MGP_CAROLIEiJ_G0023399) #28	Ntmt1 (MGP_CAROLIEiJ_G0023400) #29	Asb6 (MGP_CAROLIEiJ_G0023401) #30	Prrx2 (MGP_CAROLIEiJ_G0023402) #31	Ptges (MGP_CAROLIEiJ_G0023403) #32	Tor1b (MGP_CAROLIEiJ_G0023404) #34	Tor1a (MGP_CAROLIEiJ_G0023405) #33	BC005624 (MGP_CAROLIEiJ_G0023406) #35	Usp20 (MGP_CAROLIEiJ_G0023407) #36	Fnbp1 (MGP_CAROLIEiJ_G0023408) #37
Shrew mouse	MODERN SPECIES	16	MGP_PahariEiJ_G0024835 #7	Pkn3 (MGP_PahariEiJ_G0024836) #8	Zdhhc12 (MGP_PahariEiJ_G0024837) #9	Zer1 (MGP_PahariEiJ_G0024838) #10	Tbc1d13 (MGP_PahariEiJ_G0024839) #11	Endog (MGP_PahariEiJ_G0024840) #12	Spout1 (MGP_PahariEiJ_G0024841) #13	Kyat1 (MGP_PahariEiJ_G0024842) #14	MGP_PahariEiJ_G0024843 #16	MGP_PahariEiJ_G0024844 #16	Phyhd1 (MGP_PahariEiJ_G0024845) #17	MGP_PahariEiJ_G0024846	Dolk (MGP_PahariEiJ_G0024847) #19	Nup188 (MGP_PahariEiJ_G0024848) #20	Sh3glb2 (MGP_PahariEiJ_G0024849) #21	Miga2 (MGP_PahariEiJ_G0024850) #22	Dolpp1 (MGP_PahariEiJ_G0024851) #23	Crat (MGP_PahariEiJ_G0024852) #24	Ptpa (MGP_PahariEiJ_G0024853) #25	Ier5l (MGP_PahariEiJ_G0024854) #26	MGP_PahariEiJ_G0024855 #27	1700001O22Rik (MGP_PahariEiJ_G0024856) #28	Ntmt1 (MGP_PahariEiJ_G0024857) #29	Asb6 (MGP_PahariEiJ_G0024858) #30	MGP_PahariEiJ_G0024859 #31	Ptges (MGP_PahariEiJ_G0024860) #32	Tor1b (MGP_PahariEiJ_G0024861) #34	Tor1a (MGP_PahariEiJ_G0024862) #33	BC005624 (MGP_PahariEiJ_G0024863) #35	Usp20 (MGP_PahariEiJ_G0024864) #36	Fnbp1 (MGP_PahariEiJ_G0024865) #37
Rat	MODERN SPECIES	13	Sptan1 (ENSRNOG00000015396)	Dync2i2 (ENSRNOG00000015636)	Set (ENSRNOG00000025892) #8	Zdhhc12 (ENSRNOG00000015791) #9	Zer1 (ENSRNOG00000025832) #10	Tbc1d13 (ENSRNOG00000015970) #11	ENSRNOG00000067313	Endog (ENSRNOG00000016033) #12	Spout1 (ENSRNOG00000025711) #13	Kyat1 (ENSRNOG00000016097) #14	Lrrc8a (ENSRNOG00000025296) #16	Phyhd1 (ENSRNOG00000016794) #17	Dolk (ENSRNOG00000016989) #19	Nup188 (ENSRNOG00000025185) #20	Sh3glb2 (ENSRNOG00000017295) #21	Miga2 (ENSRNOG00000017513) #22	Dolpp1 (ENSRNOG00000017663) #23	Crat (ENSRNOG00000018145) #24	Ptpa (ENSRNOG00000018457) #25	Ier5l (ENSRNOG00000024846) #26	LOC100361008 (ENSRNOG00000022490)	C3h9orf50 (ENSRNOG00000018486) #28	Ntmt1 (ENSRNOG00000024809) #29	Prrx2 (ENSRNOG00000058329) #31	Asb6 (ENSRNOG00000024786) #30	Tor1b (ENSRNOG00000006435) #34	Tor1a (ENSRNOG00000006894) #33	C3h9orf78 (ENSRNOG00000007532) #35	Usp20 (ENSRNOG00000007710) #36	Fnbp1 (ENSRNOG00000008258) #37	Gpr107 (ENSRNOG00000023589)