Gnathostomata	ANCESTRAL SPECIES	748																ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25
Euteleostomi	ANCESTRAL SPECIES	521																ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30
Sarcopterygii	ANCESTRAL SPECIES	82	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT00940000153877	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00390000009787 #35	ENSGT00940000158829 #36
Tetrapoda	ANCESTRAL SPECIES	34	ENSGT00390000012903	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000166915	ENSGT00390000004524
Amniota	ANCESTRAL SPECIES	27	ENSGT00390000012903	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Mammalia	ANCESTRAL SPECIES	23	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Theria	ANCESTRAL SPECIES	23	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Primates	ANCESTRAL SPECIES	9	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00940000153877.h.b	ENSGT00940000154891.g.b ##9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00910000147377	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Hominoidea	ANCESTRAL SPECIES	19	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00910000147377	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00910000147507 #26	ENSGT00910000148026 #27	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00910000147377	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00910000147507 #26	ENSGT00910000148026 #27	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00910000147377	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00910000147507 #26	ENSGT00910000148026 #27	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00910000147507 #26	ENSGT00910000148026 #27	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35
Pan	ANCESTRAL SPECIES	18	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00910000147507 #26	ENSGT00910000148026 #27	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35
Bonobo	MODERN SPECIES	22	SPTAN1 (ENSPPAG00000036825) #7	DYNC2I2 (ENSPPAG00000028057) #8	ENSPPAG00000028813 #9	PKN3 (ENSPPAG00000043402) #10	ZDHHC12 (ENSPPAG00000039041) #11	ZER1 (ENSPPAG00000033759) #12	TBC1D13 (ENSPPAG00000014377) #13	ENSPPAG00000041190 #14	SPOUT1 (ENSPPAG00000001094) #15	KYAT1 (ENSPPAG00000036497) #16	LRRC8A (ENSPPAG00000043862) #17	ENSPPAG00000034131 #18	DOLK (ENSPPAG00000016072) #19	NUP188 (ENSPPAG00000038013) #20	SH3GLB2 (ENSPPAG00000039212) #21	MIGA2 (ENSPPAG00000029917) #22	DOLPP1 (ENSPPAG00000038994) #23	CRAT (ENSPPAG00000013780) #24	PTPA (ENSPPAG00000040780) #25	ENSPPAG00000022286 #26	ENSPPAG00000028686 #27	ENSPPAG00000038811 #28	NTMT1 (ENSPPAG00000038284) #29	ASB6 (ENSPPAG00000031685) #30	ENSPPAG00000031141 #31	PTGES (ENSPPAG00000031231) #32	TOR1B (ENSPPAG00000030907) #33	ENSPPAG00000031041 #34	C9orf78 (ENSPPAG00000032236) #35	USP20 (ENSPPAG00000043597) #36	FNBP1 (ENSPPAG00000014368) #37
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	671												ENSPTRG00000049934	ENSPTRG00000042778 #19	ENSPTRG00000050851 #20	ENSPTRG00000052379 #21	ENSPTRG00000044579 #22	ENSPTRG00000047001 #23	ENSPTRG00000048224 #24	ENSPTRG00000044510 #25	ENSPTRG00000042692
Chimpanzee	MODERN SPECIES	22	SPTAN1 (ENSPTRG00000021433) #7	DYNC2I2 (ENSPTRG00000021435) #8	SET (ENSPTRG00000021436)	PKN3 (ENSPTRG00000021437) #10	ZDHHC12 (ENSPTRG00000021438) #11	ZER1 (ENSPTRG00000021439) #12	TBC1D13 (ENSPTRG00000021440) #13	ENDOG (ENSPTRG00000029057) #14	SPOUT1 (ENSPTRG00000023427) #15	KYAT1 (ENSPTRG00000021442) #16	LRRC8A (ENSPTRG00000021443) #17	PHYHD1 (ENSPTRG00000021444) #18	DOLK (ENSPTRG00000029053) #19	NUP188 (ENSPTRG00000021445) #20	SH3GLB2 (ENSPTRG00000021447) #21	MIGA2 (ENSPTRG00000021449) #22	DOLPP1 (ENSPTRG00000021451) #23	CRAT (ENSPTRG00000021452) #24	PTPA (ENSPTRG00000021453) #25	ENSPTRG00000044141	ENSPTRG00000043633 #26	ENSPTRG00000045885 #27	NTMT1 (ENSPTRG00000021459) #29	C9H9orf50 (ENSPTRG00000021458) #28	ASB6 (ENSPTRG00000021460) #30	PRRX2 (ENSPTRG00000021461) #31	ENSPTRG00000052253	PTGES (ENSPTRG00000021462) #32	TOR1B (ENSPTRG00000023109) #33	TOR1A (ENSPTRG00000022599) #34	C9H9orf78 (ENSPTRG00000021465) #35
Human	MODERN SPECIES	21	SET (ENSG00000119335)	PKN3 (ENSG00000160447) #10	ZDHHC12 (ENSG00000160446) #11	ZER1 (ENSG00000160445) #12	TBC1D13 (ENSG00000107021) #13	ENDOG (ENSG00000167136) #14	SPOUT1 (ENSG00000198917) #15	ENSG00000286112	KYAT1 (ENSG00000171097) #16	LRRC8A (ENSG00000136802) #17	PHYHD1 (ENSG00000175287) #18	ENSG00000251184	DOLK (ENSG00000175283) #19	NUP188 (ENSG00000095319) #20	SH3GLB2 (ENSG00000148341) #21	MIGA2 (ENSG00000148343) #22	DOLPP1 (ENSG00000167130) #23	CRAT (ENSG00000095321) #24	PTPA (ENSG00000119383) #25	ENSG00000235007	IER5L (ENSG00000188483)	NTMT1 (ENSG00000148335) #29	C9orf50 (ENSG00000179058) #28	ASB6 (ENSG00000148331) #30	PRRX2 (ENSG00000167157) #31	PTGES (ENSG00000148344) #32	TOR1B (ENSG00000136816) #33	TOR1A (ENSG00000136827) #34	C9orf78 (ENSG00000136819) #35	USP20 (ENSG00000136878) #36	FNBP1 (ENSG00000187239) #37
Gorilla	MODERN SPECIES	22	DYNC2I2 (ENSGGOG00000007643) #8	ENSGGOG00000025716 ##9	PKN3 (ENSGGOG00000011365) #10	ZDHHC12 (ENSGGOG00000011375) #11	ZER1 (ENSGGOG00000012363) #12	TBC1D13 (ENSGGOG00000003145) #13	ENDOG (ENSGGOG00000014224) #14	SPOUT1 (ENSGGOG00000014228) #15	KYAT1 (ENSGGOG00000007427) #16	LRRC8A (ENSGGOG00000017010) #17	ENSGGOG00000017015 #18	DOLK (ENSGGOG00000004805) #19	NUP188 (ENSGGOG00000015291) #20	SH3GLB2 (ENSGGOG00000015310) #21	ENSGGOG00000040526	MIGA2 (ENSGGOG00000010864) #22	DOLPP1 (ENSGGOG00000006403) #23	CRAT (ENSGGOG00000006412) #24	ENSGGOG00000038571 #26	ENSGGOG00000037394 #27	ENSGGOG00000042146	NTMT1 (ENSGGOG00000002669) #29	ASB6 (ENSGGOG00000002672) #30	PRRX2 (ENSGGOG00000000600) #31	PTGES (ENSGGOG00000040376) #32	TOR1B (ENSGGOG00000013351) #33	TOR1A (ENSGGOG00000013356) #34	C9orf78 (ENSGGOG00000013358) #35	USP20 (ENSGGOG00000003539) #36	FNBP1 (ENSGGOG00000003548) #37	GPR107 (ENSGGOG00000001256)
Orangutan	MODERN SPECIES	22	SPTAN1 (ENSPPYG00000019657) #7	DYNC2I2 (ENSPPYG00000019658) #8	ENSPPYG00000019659 #9	PKN3 (ENSPPYG00000029746) #10	ENSPPYG00000019660 #11	ZER1 (ENSPPYG00000019661) #12	TBC1D13 (ENSPPYG00000019662) #13	ENDOG (ENSPPYG00000031616) #14	ENSPPYG00000019664 #15	ENSPPYG00000019665 #16	LRRC8A (ENSPPYG00000019666) #17	ENSPPYG00000019668 #18	DOLK (ENSPPYG00000019669) #19	NUP188 (ENSPPYG00000019670) #20	SH3GLB2 (ENSPPYG00000019671) #21	MIGA2 (ENSPPYG00000019672) #22	DOLPP1 (ENSPPYG00000019673) #23	CRAT (ENSPPYG00000019674) #24	PTPA (ENSPPYG00000019675) #25	ENSPPYG00000033180	IER5L (ENSPPYG00000040601)	C9orf50 (ENSPPYG00000019678) #28	NTMT1 (ENSPPYG00000019679) #29	ASB6 (ENSPPYG00000019680) #30	PRRX2 (ENSPPYG00000019681) #31	PTGES (ENSPPYG00000034954) #32	ENSPPYG00000038329	TOR1B (ENSPPYG00000019683) #33	TOR1A (ENSPPYG00000019684) #34	C9H9orf78 (ENSPPYG00000019685) #35	USP20 (ENSPPYG00000019686) #36
Gibbon	MODERN SPECIES	23	ENSNLEG00000017595 ##9	PKN3 (ENSNLEG00000017597) #10	ZDHHC12 (ENSNLEG00000035415) #11	ZER1 (ENSNLEG00000017607) #12	TBC1D13 (ENSNLEG00000017611) #13	ENSNLEG00000017615 #14	SPOUT1 (ENSNLEG00000017619) #15	ENSNLEG00000017629 #16	ENSNLEG00000035638	LRRC8A (ENSNLEG00000017633) #17	ENSNLEG00000033295 #18	DOLK (ENSNLEG00000019000) #19	NUP188 (ENSNLEG00000029734) #20	ENSNLEG00000017636 #21	ENSNLEG00000017638	MIGA2 (ENSNLEG00000017639) #22	DOLPP1 (ENSNLEG00000017640) #23	CRAT (ENSNLEG00000017641) #24	PTPA (ENSNLEG00000017644) #25	ENSNLEG00000017646 #26	ENSNLEG00000035309 #27	NTMT1 (ENSNLEG00000029821) #29	ENSNLEG00000035118 #28	ASB6 (ENSNLEG00000017651) #30	ENSNLEG00000017653 #31	PTGES (ENSNLEG00000017654) #32	TOR1B (ENSNLEG00000017655) #33	TOR1A (ENSNLEG00000032656) #34	C9orf78 (ENSNLEG00000017658) #35	USP20 (ENSNLEG00000017660) #36	FNBP1 (ENSNLEG00000017666) #37
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00940000158483 #8	ENSGT00940000154891.g.b ##9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00910000147377	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Rhinopithecus	ANCESTRAL SPECIES	2	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000154891.g.b ##9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Golden snub-nosed monkey	MODERN SPECIES	923	SPTAN1 (ENSRROG00000042184) #7	DYNC2I2 (ENSRROG00000000070) #8	ENSRROG00000043012 ##9	PKN3 (ENSRROG00000039599) #10	ZDHHC12 (ENSRROG00000039840) #11	ZER1 (ENSRROG00000036128) #12	TBC1D13 (ENSRROG00000018115) #13	SPOUT1 (ENSRROG00000038155) #15	ENDOG (ENSRROG00000038553) #14	KYAT1 (ENSRROG00000044573) #16	LRRC8A (ENSRROG00000031274) #17	PHYHD1 (ENSRROG00000031502) #18	DOLK (ENSRROG00000025535) #19	NUP188 (ENSRROG00000032865) #20	SH3GLB2 (ENSRROG00000030807) #21	MIGA2 (ENSRROG00000045738) #22	DOLPP1 (ENSRROG00000041333) #23	CRAT (ENSRROG00000028685) #24	PTPA (ENSRROG00000034288) #25	C9orf50 (ENSRROG00000042155) #28	NTMT1 (ENSRROG00000044965) #29	ASB6 (ENSRROG00000031344) #30	PRRX2 (ENSRROG00000039533) #31	PTGES (ENSRROG00000027236) #32	TOR1B (ENSRROG00000028784) #33	TOR1A (ENSRROG00000040520) #34	C9orf78 (ENSRROG00000041927) #35	USP20 (ENSRROG00000036984) #36	FNBP1 (ENSRROG00000005509) #37	GPR107 (ENSRROG00000043544)	NCS1 (ENSRROG00000006485)
Black snub-nosed monkey	MODERN SPECIES	1385	SPTAN1 (ENSRBIG00000044761) #7	DYNC2I2 (ENSRBIG00000033189) #8	ENSRBIG00000043093 ##9	PKN3 (ENSRBIG00000033884) #10	ZDHHC12 (ENSRBIG00000029977) #11	ZER1 (ENSRBIG00000022292) #12	TBC1D13 (ENSRBIG00000039606) #13	ENDOG (ENSRBIG00000026558) #14	SPOUT1 (ENSRBIG00000026633) #15	KYAT1 (ENSRBIG00000030782) #16	LRRC8A (ENSRBIG00000036375) #17	PHYHD1 (ENSRBIG00000044267) #18	DOLK (ENSRBIG00000009633) #19	NUP188 (ENSRBIG00000025456) #20	SH3GLB2 (ENSRBIG00000029505) #21	MIGA2 (ENSRBIG00000033691) #22	DOLPP1 (ENSRBIG00000040274) #23	CRAT (ENSRBIG00000041667) #24	PTPA (ENSRBIG00000039155) #25	IER5L (ENSRBIG00000029366)	C9orf50 (ENSRBIG00000024166) #28	NTMT1 (ENSRBIG00000040305) #29	ASB6 (ENSRBIG00000036157) #30	PRRX2 (ENSRBIG00000003536) #31	PTGES (ENSRBIG00000039670) #32	TOR1B (ENSRBIG00000033643) #33	TOR1A (ENSRBIG00000034931) #34	C9orf78 (ENSRBIG00000030208) #35	USP20 (ENSRBIG00000037821) #36	FNBP1 (ENSRBIG00000040367) #37	GPR107 (ENSRBIG00000032381)
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00940000158483 #8	ENSGT00940000154891.g.b ##9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00910000147377	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Vervet Monkey	MODERN SPECIES	3	ODF2 (ENSCSAG00000014217)	GLE1 (ENSCSAG00000014225)	SPTAN1 (ENSCSAG00000014277) #7	DYNC2I2 (ENSCSAG00000014303) #8	PKN3 (ENSCSAG00000014351) #10	ZDHHC12 (ENSCSAG00000014378) #11	ZER1 (ENSCSAG00000014389) #12	TBC1D13 (ENSCSAG00000014420) #13	ENDOG (ENSCSAG00000014436) #14	KYAT1 (ENSCSAG00000014449) #16	LRRC8A (ENSCSAG00000014458) #17	PHYHD1 (ENSCSAG00000014469) #18	DOLK (ENSCSAG00000019710) #19	NUP188 (ENSCSAG00000014498) #20	SH3GLB2 (ENSCSAG00000014507) #21	MIGA2 (ENSCSAG00000014520) #22	DOLPP1 (ENSCSAG00000014528) #23	CRAT (ENSCSAG00000014540) #24	PTPA (ENSCSAG00000014550) #25	IER5L (ENSCSAG00000019709)	C9orf50 (ENSCSAG00000014564) #28	NTMT1 (ENSCSAG00000014600) #29	ASB6 (ENSCSAG00000014602) #30	PRRX2 (ENSCSAG00000014614) #31	PTGES (ENSCSAG00000014619) #32	TOR1B (ENSCSAG00000014644) #33	TOR1A (ENSCSAG00000014657) #34	C9orf78 (ENSCSAG00000014663) #35	USP20 (ENSCSAG00000014672) #36	FNBP1 (ENSCSAG00000014702) #37	GPR107 (ENSCSAG00000014709)
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000158483 #8	ENSGT00940000154891.g.b ##9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00910000147377	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00910000147529	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00940000158483 #8	ENSGT00940000154891.g.b ##9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00910000147377	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00910000147529	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36
Olive baboon	MODERN SPECIES	4	DYNC2I2 (ENSPANG00000025902) #8	ENSPANG00000025900 #9	PKN3 (ENSPANG00000025897) #10	ZDHHC12 (ENSPANG00000035442) #11	ZER1 (ENSPANG00000025924) #12	TBC1D13 (ENSPANG00000025925) #13	ENDOG (ENSPANG00000025933) #14	SPOUT1 (ENSPANG00000025932) #15	KYAT1 (ENSPANG00000025931) #16	ENSPANG00000037244	LRRC8A (ENSPANG00000025930) #17	DOLK (ENSPANG00000003223) #19	PHYHD1 (ENSPANG00000025929) #18	NUP188 (ENSPANG00000025928) #20	SH3GLB2 (ENSPANG00000025927) #21	MIGA2 (ENSPANG00000025926) #22	DOLPP1 (ENSPANG00000025954) #23	CRAT (ENSPANG00000025955) #24	PTPA (ENSPANG00000025963) #25	IER5L (ENSPANG00000042720)	C9orf50 (ENSPANG00000025961) #28	NTMT1 (ENSPANG00000025960) #29	ASB6 (ENSPANG00000025959) #30	PRRX2 (ENSPANG00000025958) #31	PTGES (ENSPANG00000032931) #32	TOR1B (ENSPANG00000025956) #33	TOR1A (ENSPANG00000025977) #34	C9orf78 (ENSPANG00000025976) #35	USP20 (ENSPANG00000025975) #36	FNBP1 (ENSPANG00000025974) #37	GPR107 (ENSPANG00000025973)
Cercopithecinae_d	ANCESTRAL SPECIES	56	ENSGT00940000158483 #8	ENSGT00940000154891.g.b ##9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00910000147377	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00910000147529	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36
Sooty mangabey	MODERN SPECIES	489	DYNC2I2 (ENSCATG00000036415) #8	ENSCATG00000020414 ##9	PKN3 (ENSCATG00000036821) #10	ZDHHC12 (ENSCATG00000019181) #11	ZER1 (ENSCATG00000037539) #12	TBC1D13 (ENSCATG00000044380) #13	ENDOG (ENSCATG00000037516) #14	SPOUT1 (ENSCATG00000042611) #15	KYAT1 (ENSCATG00000043522) #16	LRRC8A (ENSCATG00000037564) #17	PHYHD1 (ENSCATG00000044875) #18	DOLK (ENSCATG00000017895) #19	NUP188 (ENSCATG00000039802) #20	ENSCATG00000034877	SH3GLB2 (ENSCATG00000038590) #21	MIGA2 (ENSCATG00000037290) #22	DOLPP1 (ENSCATG00000031498) #23	CRAT (ENSCATG00000039668) #24	ENSCATG00000039124	PTPA (ENSCATG00000033020) #25	IER5L (ENSCATG00000016036)	C9orf50 (ENSCATG00000037597) #28	NTMT1 (ENSCATG00000043725) #29	ASB6 (ENSCATG00000012160) #30	PRRX2 (ENSCATG00000039623) #31	ENSCATG00000037889	PTGES (ENSCATG00000032496) #32	TOR1B (ENSCATG00000005061) #33	TOR1A (ENSCATG00000045229) #34	C9orf78 (ENSCATG00000045151) #35	USP20 (ENSCATG00000004362) #36
Drill	MODERN SPECIES	1729											ENSMLEG00000030340	DOLK (ENSMLEG00000027811) #19	NUP188 (ENSMLEG00000031013) #20	ENSMLEG00000033174	SH3GLB2 (ENSMLEG00000042936) #21	MIGA2 (ENSMLEG00000029312) #22	DOLPP1 (ENSMLEG00000032287) #23	CRAT (ENSMLEG00000011139) #24	ENSMLEG00000037099	PTPA (ENSMLEG00000042722) #25	ENSMLEG00000041932 #26	C9orf50 (ENSMLEG00000041404) #28	NTMT1 (ENSMLEG00000043763) #29	ASB6 (ENSMLEG00000027726) #30	PRRX2 (ENSMLEG00000010008) #31	ENSMLEG00000002851	PTGES (ENSMLEG00000039508) #32	TOR1B (ENSMLEG00000032114) #33	TOR1A (ENSMLEG00000043366) #34	C9orf78 (ENSMLEG00000031172) #35	USP20 (ENSMLEG00000041454) #36
Macaca	DUPLICATION
Macaca	ANCESTRAL SPECIES																	ENSGT00390000008565.a.e #22
Macaca_a	ANCESTRAL SPECIES																	ENSGT00390000008565.a.e #22
Crab-eating macaque	MODERN SPECIES	6	URM1 (ENSMFAG00000035214)	CERCAM (ENSMFAG00000001783)	ENSMFAG00000034501	ODF2 (ENSMFAG00000001606)	GLE1 (ENSMFAG00000036995)	SPTAN1 (ENSMFAG00000044099) #7	DYNC2I2 (ENSMFAG00000042393) #8	ENSMFAG00000002535 #9	ZDHHC12 (ENSMFAG00000002386) #11	ZER1 (ENSMFAG00000040364) #12	TBC1D13 (ENSMFAG00000033076) #13	SPOUT1 (ENSMFAG00000016739) #15	ENSMFAG00000065292	KYAT1 (ENSMFAG00000001847) #16	ENSMFAG00000034348 #22	ENSMFAG00000047842 #22	DOLPP1 (ENSMFAG00000038391) #23	CRAT (ENSMFAG00000002439) #24	PTPA (ENSMFAG00000036348) #25	ENSMFAG00000060828	C9orf50 (ENSMFAG00000033035) #28	NTMT1 (ENSMFAG00000058034) #29	ASB6 (ENSMFAG00000007597) #30	PRRX2 (ENSMFAG00000061112) #31	PTGES (ENSMFAG00000038160) #32	TOR1B (ENSMFAG00000046247) #33	TOR1A (ENSMFAG00000038660) #34	USP20 (ENSMFAG00000001850) #36	ENSMFAG00000060062	ENSMFAG00000056629	FNBP1 (ENSMFAG00000042440) #37
Macaca	ANCESTRAL SPECIES	10	ENSGT00940000158483 #8	ENSGT00940000154891.g.b ##9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00910000147377	ENSGT00940000155841 #21	ENSGT00390000008565.a.f #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00910000147529	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00910000147997	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36
Pig-tailed macaque	MODERN SPECIES	317	DYNC2I2 (ENSMNEG00000026539) #8	ENSMNEG00000030324 ##9	PKN3 (ENSMNEG00000036073) #10	ZDHHC12 (ENSMNEG00000030634) #11	ZER1 (ENSMNEG00000027302) #12	TBC1D13 (ENSMNEG00000041058) #13	ENDOG (ENSMNEG00000030787) #14	SPOUT1 (ENSMNEG00000042898) #15	KYAT1 (ENSMNEG00000031327) #16	LRRC8A (ENSMNEG00000030674) #17	PHYHD1 (ENSMNEG00000026623) #18	DOLK (ENSMNEG00000024878) #19	NUP188 (ENSMNEG00000035446) #20	SH3GLB2 (ENSMNEG00000030887) #21	ENSMNEG00000033167	MIGA2 (ENSMNEG00000044220) #22	DOLPP1 (ENSMNEG00000028372) #23	CRAT (ENSMNEG00000036535) #24	PTPA (ENSMNEG00000037634) #25	ENSMNEG00000044324	IER5L (ENSMNEG00000021854)	C9orf50 (ENSMNEG00000043353) #28	NTMT1 (ENSMNEG00000030491) #29	ASB6 (ENSMNEG00000043072) #30	PRRX2 (ENSMNEG00000029997) #31	PTGES (ENSMNEG00000042169) #32	ENSMNEG00000035626	TOR1B (ENSMNEG00000037097) #33	TOR1A (ENSMNEG00000040996) #34	C9orf78 (ENSMNEG00000036833) #35	USP20 (ENSMNEG00000031133) #36
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00390000012903	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000154891.g.b ##9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a.f #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Crab-eating macaque	MODERN SPECIES	6	SLC27A4 (ENSMFAG00000032514)	URM1 (ENSMFAG00000035214)	CERCAM (ENSMFAG00000001783)	ENSMFAG00000034501	ODF2 (ENSMFAG00000001606)	GLE1 (ENSMFAG00000036995)	SPTAN1 (ENSMFAG00000044099) #7	DYNC2I2 (ENSMFAG00000042393) #8	ENSMFAG00000002535 #9	ZDHHC12 (ENSMFAG00000002386) #11	ZER1 (ENSMFAG00000040364) #12	TBC1D13 (ENSMFAG00000033076) #13	SPOUT1 (ENSMFAG00000016739) #15	ENSMFAG00000065292	KYAT1 (ENSMFAG00000001847) #16	ENSMFAG00000034348 #22	ENSMFAG00000047842 #22	DOLPP1 (ENSMFAG00000038391) #23	CRAT (ENSMFAG00000002439) #24	PTPA (ENSMFAG00000036348) #25	ENSMFAG00000060828	C9orf50 (ENSMFAG00000033035) #28	NTMT1 (ENSMFAG00000058034) #29	ASB6 (ENSMFAG00000007597) #30	PRRX2 (ENSMFAG00000061112) #31	PTGES (ENSMFAG00000038160) #32	TOR1B (ENSMFAG00000046247) #33	TOR1A (ENSMFAG00000038660) #34	USP20 (ENSMFAG00000001850) #36	ENSMFAG00000060062	ENSMFAG00000056629
Rhesus	MODERN SPECIES	6	GLE1 (ENSMMUG00000005989)	SPTAN1 (ENSMMUG00000009327) #7	DYNC2I2 (ENSMMUG00000009333) #8	ENSMMUG00000038373 ##9	PKN3 (ENSMMUG00000010143) #10	ZDHHC12 (ENSMMUG00000041713) #11	ZER1 (ENSMMUG00000010870) #12	TBC1D13 (ENSMMUG00000019179) #13	ENSMMUG00000047511 #15	ENSMMUG00000021848 #16	LRRC8A (ENSMMUG00000017799) #17	PHYHD1 (ENSMMUG00000032026) #18	DOLK (ENSMMUG00000011755) #19	NUP188 (ENSMMUG00000011757) #20	SH3GLB2 (ENSMMUG00000011759) #21	MIGA2 (ENSMMUG00000011765) #22	DOLPP1 (ENSMMUG00000032030) #23	CRAT (ENSMMUG00000011767) #24	PTPA (ENSMMUG00000002515) #25	IER5L (ENSMMUG00000049227)	ENSMMUG00000050813	C15H9orf50 (ENSMMUG00000009965) #28	NTMT1 (ENSMMUG00000006057) #29	ASB6 (ENSMMUG00000011816) #30	ENSMMUG00000056226	PRRX2 (ENSMMUG00000050493) #31	PTGES (ENSMMUG00000059501) #32	TOR1B (ENSMMUG00000003793) #33	C15H9orf78 (ENSMMUG00000058799) #34	USP20 (ENSMMUG00000003797) #36	FNBP1 (ENSMMUG00000003799) #37
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a.i #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a.i #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Cebidae_a	ANCESTRAL SPECIES	76			ENSGT00940000154891.g.b ##9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a.i #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Bolivian squirrel monkey	MODERN SPECIES	163			ENSSBOG00000024852 ##9	PKN3 (ENSSBOG00000027249) #10	ZDHHC12 (ENSSBOG00000019743) #11	ZER1 (ENSSBOG00000019088) #12	TBC1D13 (ENSSBOG00000025129) #13	ENDOG (ENSSBOG00000019144) #14	SPOUT1 (ENSSBOG00000032987) #15	KYAT1 (ENSSBOG00000026132) #16	LRRC8A (ENSSBOG00000020445) #17	PHYHD1 (ENSSBOG00000024385) #18	DOLK (ENSSBOG00000019671) #19	NUP188 (ENSSBOG00000028811) #20	SH3GLB2 (ENSSBOG00000031843) #21	MIGA2 (ENSSBOG00000016384) #22	DOLPP1 (ENSSBOG00000027570) #23	CRAT (ENSSBOG00000009452) #24	PTPA (ENSSBOG00000025076) #25	C9orf50 (ENSSBOG00000026313) #28	NTMT1 (ENSSBOG00000018752) #29	ASB6 (ENSSBOG00000028309) #30	PRRX2 (ENSSBOG00000030397) #31	ENSSBOG00000019940	PTGES (ENSSBOG00000023348) #32	TOR1B (ENSSBOG00000022661) #33	TOR1A (ENSSBOG00000011197) #34	C9orf78 (ENSSBOG00000028239) #35	USP20 (ENSSBOG00000025404) #36	FNBP1 (ENSSBOG00000021918) #37	GPR107 (ENSSBOG00000018705)
Capuchin	MODERN SPECIES	254			ENSCCAG00000021253 ##9	PKN3 (ENSCCAG00000036299) #10	ZDHHC12 (ENSCCAG00000020470) #11	ZER1 (ENSCCAG00000022539) #12	TBC1D13 (ENSCCAG00000026892) #13	ENDOG (ENSCCAG00000028186) #14	SPOUT1 (ENSCCAG00000037842) #15	KYAT1 (ENSCCAG00000026517) #16	LRRC8A (ENSCCAG00000017493) #17	PHYHD1 (ENSCCAG00000024162) #18	DOLK (ENSCCAG00000005576) #19	NUP188 (ENSCCAG00000031991) #20	SH3GLB2 (ENSCCAG00000024067) #21	MIGA2 (ENSCCAG00000033917) #22	DOLPP1 (ENSCCAG00000035231) #23	CRAT (ENSCCAG00000032337) #24	PTPA (ENSCCAG00000036157) #25	IER5L (ENSCCAG00000010737)	C9orf50 (ENSCCAG00000037996) #28	NTMT1 (ENSCCAG00000030955) #29	ASB6 (ENSCCAG00000028448) #30	PRRX2 (ENSCCAG00000021160) #31	PTGES (ENSCCAG00000029282) #32	ENSCCAG00000021123 #33	TOR1A (ENSCCAG00000029451) #34	C9orf78 (ENSCCAG00000031507) #35	USP20 (ENSCCAG00000036441) #36	ENSCCAG00000026582	FNBP1 (ENSCCAG00000027876) #37
Marmoset	MODERN SPECIES		SPTAN1 (ENSCJAG00000020080) #7	DYNC2I2 (ENSCJAG00000020157) #8	ENSCJAG00000047551	PKN3 (ENSCJAG00000020165) #10	ZDHHC12 (ENSCJAG00000020184) #11	ZER1 (ENSCJAG00000020189) #12	TBC1D13 (ENSCJAG00000020207) #13	ENDOG (ENSCJAG00000020220) #14	SPOUT1 (ENSCJAG00000020221) #15	KYAT1 (ENSCJAG00000020240) #16	LRRC8A (ENSCJAG00000020246) #17	PHYHD1 (ENSCJAG00000020054) #18	DOLK (ENSCJAG00000020248) #19	NUP188 (ENSCJAG00000020249) #20	SH3GLB2 (ENSCJAG00000020282) #21	MIGA2 (ENSCJAG00000020285) #22	CRAT (ENSCJAG00000020293) #24	PTPA (ENSCJAG00000020295) #25	IER5L (ENSCJAG00000046685)	ENSCJAG00000069444	C9orf50 (ENSCJAG00000020306) #28	NTMT1 (ENSCJAG00000020309) #29	ASB6 (ENSCJAG00000020312) #30	PRRX2 (ENSCJAG00000020303) #31	PTGES (ENSCJAG00000086828) #32	TOR1B (ENSCJAG00000020343) #33	TOR1A (ENSCJAG00000020346) #34	ENSCJAG00000020318 #35	USP20 (ENSCJAG00000020348) #36	FNBP1 (ENSCJAG00000020360) #37	GPR107 (ENSCJAG00000020376)
Mas night monkey	MODERN SPECIES	768	GLE1 (ENSANAG00000031688)	SPTAN1 (ENSANAG00000032080) #7	DYNC2I2 (ENSANAG00000027697) #8	ENSANAG00000025517 ##9	PKN3 (ENSANAG00000034145) #10	ZDHHC12 (ENSANAG00000035881) #11	ZER1 (ENSANAG00000029586) #12	TBC1D13 (ENSANAG00000036964) #13	SPOUT1 (ENSANAG00000036350) #15	KYAT1 (ENSANAG00000034498) #16	LRRC8A (ENSANAG00000035694) #17	PHYHD1 (ENSANAG00000036355) #18	DOLK (ENSANAG00000012512) #19	NUP188 (ENSANAG00000036382) #20	SH3GLB2 (ENSANAG00000022410) #21	MIGA2 (ENSANAG00000034478) #22	DOLPP1 (ENSANAG00000037795) #23	CRAT (ENSANAG00000037185) #24	PTPA (ENSANAG00000022142) #25	IER5L (ENSANAG00000036029)	NTMT1 (ENSANAG00000029680) #29	ASB6 (ENSANAG00000025599) #30	PRRX2 (ENSANAG00000022713) #31	PTGES (ENSANAG00000033808) #32	TOR1B (ENSANAG00000021948) #33	TOR1A (ENSANAG00000022800) #34	C9orf78 (ENSANAG00000037186) #35	USP20 (ENSANAG00000033852) #36	FNBP1 (ENSANAG00000034541) #37	GPR107 (ENSANAG00000028584)	ENSANAG00000019861
Tarsier	MODERN SPECIES	2495																MIGA2 (ENSTSYG00000028691) #22	DOLPP1 (ENSTSYG00000029072) #23	CRAT (ENSTSYG00000028400) #24
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Lemuriformes	ANCESTRAL SPECIES	12	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Lemuriformes_a	ANCESTRAL SPECIES	2	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Coquerels sifaka	MODERN SPECIES	168	SPTAN1 (ENSPCOG00000027155) #7	DYNC2I2 (ENSPCOG00000014797) #8	SET (ENSPCOG00000025517)	PKN3 (ENSPCOG00000027227) #10	ZDHHC12 (ENSPCOG00000014328) #11	ZER1 (ENSPCOG00000027080) #12	TBC1D13 (ENSPCOG00000016027) #13	ENDOG (ENSPCOG00000022447) #14	SPOUT1 (ENSPCOG00000002584) #15	KYAT1 (ENSPCOG00000025020) #16	LRRC8A (ENSPCOG00000014012) #17	PHYHD1 (ENSPCOG00000024815) #18	DOLK (ENSPCOG00000013396) #19	NUP188 (ENSPCOG00000022765) #20	SH3GLB2 (ENSPCOG00000006774) #21	MIGA2 (ENSPCOG00000003498) #22	DOLPP1 (ENSPCOG00000016455) #23	CRAT (ENSPCOG00000014482) #24	PTPA (ENSPCOG00000027977) #25	IER5L (ENSPCOG00000013497)	C9orf50 (ENSPCOG00000023076) #28	NTMT1 (ENSPCOG00000027997) #29	ASB6 (ENSPCOG00000021385) #30	PRRX2 (ENSPCOG00000023672) #31	PTGES (ENSPCOG00000016010) #32	TOR1B (ENSPCOG00000008511) #33	TOR1A (ENSPCOG00000020399) #34	C9orf78 (ENSPCOG00000026688) #35	USP20 (ENSPCOG00000017362) #36	FNBP1 (ENSPCOG00000018475) #37	GPR107 (ENSPCOG00000024575)
Greater bamboo lemur	MODERN SPECIES	638	MPZ (ENSPSMG00000020601)	ENSPSMG00000020547 ##9	PKN3 (ENSPSMG00000020481) #10	ZDHHC12 (ENSPSMG00000020443) #11	ZER1 (ENSPSMG00000020427) #12	TBC1D13 (ENSPSMG00000020397) #13	ENDOG (ENSPSMG00000020374) #14	SPOUT1 (ENSPSMG00000020365) #15	ENSPSMG00000020358	KYAT1 (ENSPSMG00000020315) #16	LRRC8A (ENSPSMG00000020267) #17	PHYHD1 (ENSPSMG00000020240) #18	DOLK (ENSPSMG00000020148) #19	NUP188 (ENSPSMG00000020127) #20	SH3GLB2 (ENSPSMG00000019972) #21	MIGA2 (ENSPSMG00000019731) #22	DOLPP1 (ENSPSMG00000019683) #23	CRAT (ENSPSMG00000019659) #24	PTPA (ENSPSMG00000019620) #25	ENSPSMG00000019528	NTMT1 (ENSPSMG00000019523) #29	ASB6 (ENSPSMG00000019504) #30	PRRX2 (ENSPSMG00000019459) #31	PTGES (ENSPSMG00000019452) #32	TOR1B (ENSPSMG00000019444) #33	TOR1A (ENSPSMG00000019434) #34	C9orf78 (ENSPSMG00000019422) #35	USP20 (ENSPSMG00000019349) #36	FNBP1 (ENSPSMG00000019223) #37	GPR107 (ENSPSMG00000019182)	HMCN2 (ENSPSMG00000019168)
Mouse lemur	MODERN SPECIES	1	SPTAN1 (ENSMICG00000017641) #7	DYNC2I2 (ENSMICG00000017642) #8	ENSMICG00000017643 ##9	PKN3 (ENSMICG00000017644) #10	ZDHHC12 (ENSMICG00000017645) #11	ZER1 (ENSMICG00000017646) #12	TBC1D13 (ENSMICG00000017647) #13	ENDOG (ENSMICG00000017648) #14	SPOUT1 (ENSMICG00000017649) #15	KYAT1 (ENSMICG00000014042) #16	LRRC8A (ENSMICG00000036276) #17	PHYHD1 (ENSMICG00000005825) #18	DOLK (ENSMICG00000005845) #19	NUP188 (ENSMICG00000005848) #20	SH3GLB2 (ENSMICG00000005895) #21	MIGA2 (ENSMICG00000033236) #22	DOLPP1 (ENSMICG00000005907) #23	CRAT (ENSMICG00000005911) #24	PTPA (ENSMICG00000005925) #25	IER5L (ENSMICG00000028875)	C9orf50 (ENSMICG00000038544) #28	NTMT1 (ENSMICG00000029094) #29	ASB6 (ENSMICG00000007596) #30	PRRX2 (ENSMICG00000028857) #31	PTGES (ENSMICG00000035671) #32	TOR1B (ENSMICG00000009585) #33	TOR1A (ENSMICG00000009593) #34	ENSMICG00000009596 #35	USP20 (ENSMICG00000016384) #36	FNBP1 (ENSMICG00000009605) #37	GPR107 (ENSMICG00000009620)
Bushbaby	MODERN SPECIES	202		ENSOGAG00000007635 ##9	PKN3 (ENSOGAG00000030479) #10	ZDHHC12 (ENSOGAG00000024479) #11	ZER1 (ENSOGAG00000004996) #12	TBC1D13 (ENSOGAG00000005629) #13	ENDOG (ENSOGAG00000024803) #14	SPOUT1 (ENSOGAG00000001655) #15	ENSOGAG00000001657 #16	LRRC8A (ENSOGAG00000033697) #17	PHYHD1 (ENSOGAG00000006233) #18	DOLK (ENSOGAG00000025919) #19	ENSOGAG00000009024 #20	ENSOGAG00000031167 #20	SH3GLB2 (ENSOGAG00000009035) #21	MIGA2 (ENSOGAG00000009043) #22	DOLPP1 (ENSOGAG00000009049) #23	CRAT (ENSOGAG00000009051) #24	ENSOGAG00000033098 #25	ENSOGAG00000031326 #25	IER5L (ENSOGAG00000009697)	C9orf50 (ENSOGAG00000013856) #28	NTMT1 (ENSOGAG00000013857) #29	ASB6 (ENSOGAG00000033025) #30	PRRX2 (ENSOGAG00000027216) #31	ENSOGAG00000009758 #32	TOR1B (ENSOGAG00000009763) #33	TOR1A (ENSOGAG00000009766) #34	C9orf78 (ENSOGAG00000009770) #35	USP20 (ENSOGAG00000009775) #36	FNBP1 (ENSOGAG00000034453) #37
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Tree shrew	MODERN SPECIES	5863														NUP188 (ENSTBEG00000009957) #20	SH3GLB2 (ENSTBEG00000010602) #21	MIGA2 (ENSTBEG00000011279) #22	DOLPP1 (ENSTBEG00000011404) #23	ENSTBEG00000011574 #24	PTPA (ENSTBEG00000011685) #25
Glires	ANCESTRAL SPECIES	9	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Kangaroo rat	MODERN SPECIES	374	ENSDORG00000023957 #7	Dync2i2 (ENSDORG00000011867) #8	ENSDORG00000027815	Pkn3 (ENSDORG00000013496) #10	Zdhhc12 (ENSDORG00000013500) #11	Zer1 (ENSDORG00000013504) #12	Tbc1d13 (ENSDORG00000027055) #13	Endog (ENSDORG00000028893) #14	Spout1 (ENSDORG00000008670) #15	Kyat1 (ENSDORG00000008671) #16	Lrrc8a (ENSDORG00000008674) #17	Phyhd1 (ENSDORG00000016016) #18	Dolk (ENSDORG00000016017) #19	Nup188 (ENSDORG00000010867) #20	Sh3glb2 (ENSDORG00000010868) #21	Miga2 (ENSDORG00000006836) #22	Dolpp1 (ENSDORG00000006838) #23	Crat (ENSDORG00000006841) #24	Ptpa (ENSDORG00000006842) #25	Ntmt1 (ENSDORG00000014314) #29	Asb6 (ENSDORG00000014313) #30	Prrx2 (ENSDORG00000003232) #31	Ptges (ENSDORG00000003233) #32	Tor1b (ENSDORG00000000778) #33	Tor1a (ENSDORG00000000780) #34	BC005624 (ENSDORG00000000781) #35	Usp20 (ENSDORG00000000782) #36	Fnbp1 (ENSDORG00000000783) #37	Gpr107 (ENSDORG00000006286)	ENSDORG00000013807	Hmcn2 (ENSDORG00000027158)
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000154891 #9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000154891 #9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Cricetidae	ANCESTRAL SPECIES	12	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Chinese hamster chok1gshd	MODERN SPECIES	188	ENSCGRG00001020955	Dync2i2 (ENSCGRG00001019053) #8	ENSCGRG00001001629	Pkn3 (ENSCGRG00001005515) #10	Zdhhc12 (ENSCGRG00001013072) #11	Zer1 (ENSCGRG00001011706) #12	Tbc1d13 (ENSCGRG00001002371) #13	Spout1 (ENSCGRG00001022370) #15	Endog (ENSCGRG00001024006) #14	Kyat1 (ENSCGRG00001023967) #16	Lrrc8a (ENSCGRG00001000796) #17	Phyhd1 (ENSCGRG00001022088) #18	Dolk (ENSCGRG00001009570) #19	Nup188 (ENSCGRG00001022209) #20	Sh3glb2 (ENSCGRG00001018391) #21	Miga2 (ENSCGRG00001023379) #22	Dolpp1 (ENSCGRG00001023876) #23	Crat (ENSCGRG00001021049) #24	Ptpa (ENSCGRG00001023315) #25	Ier5l (ENSCGRG00001010079)	ENSCGRG00001009423	Ntmt1 (ENSCGRG00001016567) #29	Asb6 (ENSCGRG00001005975) #30	ENSCGRG00001007146	Prrx2 (ENSCGRG00001023907) #31	Ptges (ENSCGRG00001024200) #32	Tor1b (ENSCGRG00001023992) #33	Tor1a (ENSCGRG00001024352) #34	BC005624 (ENSCGRG00001024600) #35	Usp20 (ENSCGRG00001007813) #36	Fnbp1 (ENSCGRG00001023502) #37
Golden Hamster	MODERN SPECIES	809	Gle1 (ENSMAUG00000022138)	Sptan1 (ENSMAUG00000010972) #7	Dync2i2 (ENSMAUG00000020469) #8	Pkn3 (ENSMAUG00000014746) #10	Zdhhc12 (ENSMAUG00000020895) #11	ENSMAUG00000012662 #12	Tbc1d13 (ENSMAUG00000017508) #13	Endog (ENSMAUG00000015619) #14	Spout1 (ENSMAUG00000021158) #15	Kyat1 (ENSMAUG00000019437) #16	Lrrc8a (ENSMAUG00000012895) #17	Phyhd1 (ENSMAUG00000018614) #18	Dolk (ENSMAUG00000008066) #19	Nup188 (ENSMAUG00000008082) #20	Sh3glb2 (ENSMAUG00000017931) #21	Miga2 (ENSMAUG00000012688) #22	Dolpp1 (ENSMAUG00000008242) #23	ENSMAUG00000019894 #25	Ier5l (ENSMAUG00000020281)	1700001O22Rik (ENSMAUG00000021861) #28	Ntmt1 (ENSMAUG00000010002) #29	Asb6 (ENSMAUG00000002864) #30	Prrx2 (ENSMAUG00000021405) #31	Ptges (ENSMAUG00000013314) #32	Tor1b (ENSMAUG00000019063) #33	Tor1a (ENSMAUG00000002165) #34	BC005624 (ENSMAUG00000021586) #35	Usp20 (ENSMAUG00000009267) #36	Fnbp1 (ENSMAUG00000016222) #37	Gpr107 (ENSMAUG00000020250)	ENSMAUG00000008220
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Prairie vole	MODERN SPECIES	12	Sptan1 (ENSMOCG00000012343) #7	Dync2i2 (ENSMOCG00000000668) #8	ENSMOCG00000011320	Pkn3 (ENSMOCG00000021624) #10	Zdhhc12 (ENSMOCG00000004344) #11	Zer1 (ENSMOCG00000012943) #12	Tbc1d13 (ENSMOCG00000022556) #13	Endog (ENSMOCG00000010842) #14	ENSMOCG00000002315 #15	Kyat1 (ENSMOCG00000021586) #16	Lrrc8a (ENSMOCG00000014593) #17	Phyhd1 (ENSMOCG00000009846) #18	Dolk (ENSMOCG00000002814) #19	Nup188 (ENSMOCG00000010171) #20	Sh3glb2 (ENSMOCG00000004521) #21	Miga2 (ENSMOCG00000019768) #22	Dolpp1 (ENSMOCG00000008747) #23	Crat (ENSMOCG00000004305) #24	Ptpa (ENSMOCG00000019410) #25	Ier5l (ENSMOCG00000017416)	1700001O22Rik (ENSMOCG00000012438) #28	Ntmt1 (ENSMOCG00000010387) #29	Asb6 (ENSMOCG00000020410) #30	Prrx2 (ENSMOCG00000016329) #31	Ptges (ENSMOCG00000001304) #32	Tor1b (ENSMOCG00000022871) #33	Tor1a (ENSMOCG00000018560) #34	BC005624 (ENSMOCG00000017143) #35	Usp20 (ENSMOCG00000007792) #36	ENSMOCG00000018660	Fnbp1 (ENSMOCG00000015891) #37
Northern American deer mouse	MODERN SPECIES	17	Dync2i2 (ENSPEMG00000009337) #8	Set (ENSPEMG00000017351) #9	Pkn3 (ENSPEMG00000018700) #10	Zdhhc12 (ENSPEMG00000016258) #11	Zer1 (ENSPEMG00000012817) #12	ENSPEMG00000028798	Tbc1d13 (ENSPEMG00000012254) #13	Endog (ENSPEMG00000011395) #14	Spout1 (ENSPEMG00000009348) #15	Kyat1 (ENSPEMG00000010986) #16	Lrrc8a (ENSPEMG00000014647) #17	Phyhd1 (ENSPEMG00000010572) #18	Dolk (ENSPEMG00000007139) #19	Nup188 (ENSPEMG00000010521) #20	Sh3glb2 (ENSPEMG00000018190) #21	Miga2 (ENSPEMG00000012443) #22	Dolpp1 (ENSPEMG00000004526) #23	Crat (ENSPEMG00000015930) #24	Ptpa (ENSPEMG00000004930) #25	Ier5l (ENSPEMG00000026595)	1700001O22Rik (ENSPEMG00000008559) #28	Ntmt1 (ENSPEMG00000016214) #29	Asb6 (ENSPEMG00000018965) #30	ENSPEMG00000008511 #31	Ptges (ENSPEMG00000026928) #32	Tor1b (ENSPEMG00000015643) #33	Tor1a (ENSPEMG00000017473) #34	BC005624 (ENSPEMG00000013405) #35	Usp20 (ENSPEMG00000017617) #36	Fnbp1 (ENSPEMG00000005382) #37	Gpr107 (ENSPEMG00000011641)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000154891 #9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Mus	ANCESTRAL SPECIES	1	ENSGT00940000158483 #8	ENSGT00940000154891 #9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT01070000256473	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00860000135997	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Mus_A	ANCESTRAL SPECIES		ENSGT00940000158483 #8	ENSGT00940000154891 #9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A.c.b #17	ENSGT00390000006287 #18	ENSGT01070000256473	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00860000135997	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000154891 #9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A.c.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00860000135997	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Mouse	MODERN SPECIES	11	Sptan1 (ENSMUSG00000057738) #7	Dync2i2 (ENSMUSG00000039715) #8	Set (ENSMUSG00000054766) #9	Pkn3 (ENSMUSG00000026785) #10	Zdhhc12 (ENSMUSG00000015335) #11	Zer1 (ENSMUSG00000039686) #12	Tbc1d13 (ENSMUSG00000039678) #13	Endog (ENSMUSG00000015337) #14	Spout1 (ENSMUSG00000039660) #15	Kyat1 (ENSMUSG00000039648) #16	Lrrc8a (ENSMUSG00000007476) #17	Phyhd1 (ENSMUSG00000079484) #18	Dolk (ENSMUSG00000075419) #19	Nup188 (ENSMUSG00000052533) #20	Sh3glb2 (ENSMUSG00000026860) #21	Miga2 (ENSMUSG00000026858) #22	Dolpp1 (ENSMUSG00000026856) #23	Crat (ENSMUSG00000026853) #24	Ptpa (ENSMUSG00000039515) #25	Ier5l (ENSMUSG00000089762)	Cstad (ENSMUSG00000047363)	1700001O22Rik (ENSMUSG00000044320) #28	Ntmt1 (ENSMUSG00000026857) #29	Asb6 (ENSMUSG00000039483) #30	Prrx2 (ENSMUSG00000039476) #31	Ptges (ENSMUSG00000050737) #32	Tor1b (ENSMUSG00000026848) #33	Tor1a (ENSMUSG00000026849) #34	BC005624 (ENSMUSG00000026851) #35	Usp20 (ENSMUSG00000026854) #36	Fnbp1 (ENSMUSG00000075415) #37
Mus_C	ANCESTRAL SPECIES		ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000154891 #9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A.c.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00860000135997	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
spretus	MODERN SPECIES	11	MGP_SPRETEiJ_G0024295	Pkn3 (MGP_SPRETEiJ_G0024296) #10	Zdhhc12 (MGP_SPRETEiJ_G0024297) #11	Zer1 (MGP_SPRETEiJ_G0024298) #12	Tbc1d13 (MGP_SPRETEiJ_G0024299) #13	Endog (MGP_SPRETEiJ_G0024300) #14	Spout1 (MGP_SPRETEiJ_G0024301) #15	Kyat1 (MGP_SPRETEiJ_G0024302) #16	Lrrc8a (MGP_SPRETEiJ_G0024303) #17	MGP_SPRETEiJ_G0024304 #17	Phyhd1 (MGP_SPRETEiJ_G0024305) #18	MGP_SPRETEiJ_G0024306 #20	Dolk (MGP_SPRETEiJ_G0024307) #19	Nup188 (MGP_SPRETEiJ_G0024308) #20	Sh3glb2 (MGP_SPRETEiJ_G0024309) #21	Miga2 (MGP_SPRETEiJ_G0024310) #22	Dolpp1 (MGP_SPRETEiJ_G0024311) #23	Crat (MGP_SPRETEiJ_G0024312) #24	Ptpa (MGP_SPRETEiJ_G0024313) #25	Ier5l (MGP_SPRETEiJ_G0024314)	Cstad (MGP_SPRETEiJ_G0024315)	1700001O22Rik (MGP_SPRETEiJ_G0024316) #28	Ntmt1 (MGP_SPRETEiJ_G0024317) #29	Asb6 (MGP_SPRETEiJ_G0024318) #30	Prrx2 (MGP_SPRETEiJ_G0024319) #31	Ptges (MGP_SPRETEiJ_G0024320) #32	Tor1a (MGP_SPRETEiJ_G0024321) #34	Tor1b (MGP_SPRETEiJ_G0024322) #33	BC005624 (MGP_SPRETEiJ_G0024323) #35	Usp20 (MGP_SPRETEiJ_G0024324) #36	Fnbp1 (MGP_SPRETEiJ_G0024325) #37
Steppe mouse	MODERN SPECIES	2944	Dync2i2 (ENSMSIG00000005195) #8	ENSMSIG00000005123 #9	Pkn3 (ENSMSIG00000005062) #10	Zdhhc12 (ENSMSIG00000005028) #11	Zer1 (ENSMSIG00000004937) #12	Tbc1d13 (ENSMSIG00000004898) #13	ENSMSIG00000004892	Endog (ENSMSIG00000004884) #14	Spout1 (ENSMSIG00000004854) #15	Kyat1 (ENSMSIG00000004284) #16	Lrrc8a (ENSMSIG00000004237) #17	Phyhd1 (ENSMSIG00000004133) #18	Dolk (ENSMSIG00000004119) #19	Nup188 (ENSMSIG00000003905) #20	Sh3glb2 (ENSMSIG00000003753) #21	Miga2 (ENSMSIG00000003682) #22	Dolpp1 (ENSMSIG00000003579) #23
Ryukyu mouse	MODERN SPECIES	11	MGP_CAROLIEiJ_G0023378	Pkn3 (MGP_CAROLIEiJ_G0023379) #10	Zdhhc12 (MGP_CAROLIEiJ_G0023380) #11	Zer1 (MGP_CAROLIEiJ_G0023381) #12	Tbc1d13 (MGP_CAROLIEiJ_G0023382) #13	Endog (MGP_CAROLIEiJ_G0023383) #14	Spout1 (MGP_CAROLIEiJ_G0023384) #15	Kyat1 (MGP_CAROLIEiJ_G0023385) #16	MGP_CAROLIEiJ_G0023386 #17	Lrrc8a (MGP_CAROLIEiJ_G0023387) #17	Phyhd1 (MGP_CAROLIEiJ_G0023388) #18	MGP_CAROLIEiJ_G0023389	Dolk (MGP_CAROLIEiJ_G0023390) #19	MGP_CAROLIEiJ_G0023391 #20	Sh3glb2 (MGP_CAROLIEiJ_G0023392) #21	Miga2 (MGP_CAROLIEiJ_G0023393) #22	Dolpp1 (MGP_CAROLIEiJ_G0023394) #23	Crat (MGP_CAROLIEiJ_G0023395) #24	Ptpa (MGP_CAROLIEiJ_G0023396) #25	Ier5l (MGP_CAROLIEiJ_G0023397)	Cstad (MGP_CAROLIEiJ_G0023398)	1700001O22Rik (MGP_CAROLIEiJ_G0023399) #28	Ntmt1 (MGP_CAROLIEiJ_G0023400) #29	Asb6 (MGP_CAROLIEiJ_G0023401) #30	Prrx2 (MGP_CAROLIEiJ_G0023402) #31	Ptges (MGP_CAROLIEiJ_G0023403) #32	Tor1b (MGP_CAROLIEiJ_G0023404) #33	Tor1a (MGP_CAROLIEiJ_G0023405) #34	BC005624 (MGP_CAROLIEiJ_G0023406) #35	Usp20 (MGP_CAROLIEiJ_G0023407) #36	Fnbp1 (MGP_CAROLIEiJ_G0023408) #37
Shrew mouse	MODERN SPECIES	16	MGP_PahariEiJ_G0024835	Pkn3 (MGP_PahariEiJ_G0024836) #10	Zdhhc12 (MGP_PahariEiJ_G0024837) #11	Zer1 (MGP_PahariEiJ_G0024838) #12	Tbc1d13 (MGP_PahariEiJ_G0024839) #13	Endog (MGP_PahariEiJ_G0024840) #14	Spout1 (MGP_PahariEiJ_G0024841) #15	Kyat1 (MGP_PahariEiJ_G0024842) #16	MGP_PahariEiJ_G0024843 #17	MGP_PahariEiJ_G0024844 #17	Phyhd1 (MGP_PahariEiJ_G0024845) #18	MGP_PahariEiJ_G0024846	Dolk (MGP_PahariEiJ_G0024847) #19	Nup188 (MGP_PahariEiJ_G0024848) #20	Sh3glb2 (MGP_PahariEiJ_G0024849) #21	Miga2 (MGP_PahariEiJ_G0024850) #22	Dolpp1 (MGP_PahariEiJ_G0024851) #23	Crat (MGP_PahariEiJ_G0024852) #24	Ptpa (MGP_PahariEiJ_G0024853) #25	Ier5l (MGP_PahariEiJ_G0024854)	MGP_PahariEiJ_G0024855	1700001O22Rik (MGP_PahariEiJ_G0024856) #28	Ntmt1 (MGP_PahariEiJ_G0024857) #29	Asb6 (MGP_PahariEiJ_G0024858) #30	MGP_PahariEiJ_G0024859 #31	Ptges (MGP_PahariEiJ_G0024860) #32	Tor1b (MGP_PahariEiJ_G0024861) #33	Tor1a (MGP_PahariEiJ_G0024862) #34	BC005624 (MGP_PahariEiJ_G0024863) #35	Usp20 (MGP_PahariEiJ_G0024864) #36	Fnbp1 (MGP_PahariEiJ_G0024865) #37
Rat	MODERN SPECIES	13	Sptan1 (ENSRNOG00000015396) #7	Dync2i2 (ENSRNOG00000015636) #8	Set (ENSRNOG00000025892) #10	Zdhhc12 (ENSRNOG00000015791) #11	Zer1 (ENSRNOG00000025832) #12	Tbc1d13 (ENSRNOG00000015970) #13	ENSRNOG00000067313	Endog (ENSRNOG00000016033) #14	Spout1 (ENSRNOG00000025711) #15	Kyat1 (ENSRNOG00000016097) #16	Lrrc8a (ENSRNOG00000025296) #17	Phyhd1 (ENSRNOG00000016794) #18	Dolk (ENSRNOG00000016989) #19	Nup188 (ENSRNOG00000025185) #20	Sh3glb2 (ENSRNOG00000017295) #21	Miga2 (ENSRNOG00000017513) #22	Dolpp1 (ENSRNOG00000017663) #23	Crat (ENSRNOG00000018145) #24	Ptpa (ENSRNOG00000018457) #25	Ier5l (ENSRNOG00000024846)	LOC100361008 (ENSRNOG00000022490)	C3h9orf50 (ENSRNOG00000018486) #28	Ntmt1 (ENSRNOG00000024809) #29	Prrx2 (ENSRNOG00000058329) #31	Asb6 (ENSRNOG00000024786) #30	Tor1b (ENSRNOG00000006435) #33	Tor1a (ENSRNOG00000006894) #34	C3h9orf78 (ENSRNOG00000007532) #35	Usp20 (ENSRNOG00000007710) #36	Fnbp1 (ENSRNOG00000008258) #37	Gpr107 (ENSRNOG00000023589)
Upper Galilee mountains blind mole rat	MODERN SPECIES	513											Lrrc8a (ENSNGAG00000011643) #17	Phyhd1 (ENSNGAG00000010437) #18	Dolk (ENSNGAG00000017040) #19	Nup188 (ENSNGAG00000011416) #20	Sh3glb2 (ENSNGAG00000012596) #21	Miga2 (ENSNGAG00000000403) #22	Dolpp1 (ENSNGAG00000010714) #23	Crat (ENSNGAG00000010316) #24	Ptpa (ENSNGAG00000007141) #25	Ier5l (ENSNGAG00000016964)	Ntmt1 (ENSNGAG00000020520) #29	Asb6 (ENSNGAG00000018657) #30	Prrx2 (ENSNGAG00000015873) #31	Ptges (ENSNGAG00000011958) #32	Tor1b (ENSNGAG00000014937) #33	Tor1a (ENSNGAG00000008009) #34	BC005624 (ENSNGAG00000004959) #35	ENSNGAG00000007690 #36	Fnbp1 (ENSNGAG00000012937) #37	Gpr107 (ENSNGAG00000011379)	Ncs1 (ENSNGAG00000014453)
Lesser Egyptian jerboa	MODERN SPECIES	216											Lrrc8a (ENSJJAG00000000198) #17	Phyhd1 (ENSJJAG00000023245) #18	Dolk (ENSJJAG00000012440) #19	Nup188 (ENSJJAG00000014303) #20	Sh3glb2 (ENSJJAG00000004845) #21	Miga2 (ENSJJAG00000005734) #22	Dolpp1 (ENSJJAG00000023436) #23	Crat (ENSJJAG00000021624) #24	Ptpa (ENSJJAG00000019117) #25	Ier5l (ENSJJAG00000018437)	Ntmt1 (ENSJJAG00000018216) #29	Asb6 (ENSJJAG00000005860) #30	Prrx2 (ENSJJAG00000001173) #31	Ptges (ENSJJAG00000022123) #32	Tor1b (ENSJJAG00000021809) #33	Tor1a (ENSJJAG00000020493) #34	BC005624 (ENSJJAG00000019276) #35	ENSJJAG00000018480 #36	Fnbp1 (ENSJJAG00000014760) #37	Gpr107 (ENSJJAG00000011368)	ENSJJAG00000006586
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000163010
Hystricomorpha_b	ANCESTRAL SPECIES	36	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Long-tailed chinchilla	MODERN SPECIES	277	SPTAN1 (ENSCLAG00000001091) #7	DYNC2I2 (ENSCLAG00000002947) #8	ENSCLAG00000003024 #9	PKN3 (ENSCLAG00000003289) #10	ZDHHC12 (ENSCLAG00000003973) #11	ZER1 (ENSCLAG00000004427) #12	TBC1D13 (ENSCLAG00000005683) #13	ENDOG (ENSCLAG00000006402) #14	SPOUT1 (ENSCLAG00000006487) #15	KYAT1 (ENSCLAG00000001172) #16	LRRC8A (ENSCLAG00000001240) #17	PHYHD1 (ENSCLAG00000001266) #18	DOLK (ENSCLAG00000017527) #19	NUP188 (ENSCLAG00000001480) #20	SH3GLB2 (ENSCLAG00000001218) #21	MIGA2 (ENSCLAG00000001336) #22	DOLPP1 (ENSCLAG00000001378) #23	CRAT (ENSCLAG00000001485) #24	PTPA (ENSCLAG00000001536) #25	IER5L (ENSCLAG00000001614)	NTMT1 (ENSCLAG00000002237) #29	ASB6 (ENSCLAG00000002288) #30
Degu	MODERN SPECIES	164	GLE1 (ENSODEG00000017394)	SPTAN1 (ENSODEG00000017300) #7	DYNC2I2 (ENSODEG00000017068) #8	SET (ENSODEG00000017107)	PKN3 (ENSODEG00000016958) #10	ZDHHC12 (ENSODEG00000016995) #11	ZER1 (ENSODEG00000017759) #12	TBC1D13 (ENSODEG00000016965) #13	ENDOG (ENSODEG00000017274) #14	KYAT1 (ENSODEG00000016683) #16	LRRC8A (ENSODEG00000017019) #17	PHYHD1 (ENSODEG00000017108) #18	DOLK (ENSODEG00000020510) #19	NUP188 (ENSODEG00000017059) #20	SH3GLB2 (ENSODEG00000016670) #21	MIGA2 (ENSODEG00000016705) #22	ENSODEG00000017020 #23	CRAT (ENSODEG00000016857) #24	ENSODEG00000016771 #25	IER5L (ENSODEG00000016680)	NTMT1 (ENSODEG00000016698) #29	ASB6 (ENSODEG00000016637) #30	PRRX2 (ENSODEG00000016961) #31	PTGES (ENSODEG00000017072) #32	TOR1B (ENSODEG00000016942) #33	TOR1A (ENSODEG00000016914) #34	ENSODEG00000017319 #35	USP20 (ENSODEG00000016809) #36	FNBP1 (ENSODEG00000016898) #37	GPR107 (ENSODEG00000016679)	NCS1 (ENSODEG00000016264)
Guinea pig	MODERN SPECIES	27	SPTAN1 (ENSCPOG00000009432) #7	DYNC2I2 (ENSCPOG00000031445) #8	SET (ENSCPOG00000022617)	PKN3 (ENSCPOG00000013841) #10	ZDHHC12 (ENSCPOG00000022707) #11	ZER1 (ENSCPOG00000009341) #12	TBC1D13 (ENSCPOG00000015146) #13	ENDOG (ENSCPOG00000025286) #14	SPOUT1 (ENSCPOG00000004710) #15	KYAT1 (ENSCPOG00000021570) #16	LRRC8A (ENSCPOG00000004076) #17	PHYHD1 (ENSCPOG00000021159) #18	DOLK (ENSCPOG00000004082) #19	NUP188 (ENSCPOG00000004083) #20	SH3GLB2 (ENSCPOG00000004099) #21	MIGA2 (ENSCPOG00000022426) #22	DOLPP1 (ENSCPOG00000030017) #23	CRAT (ENSCPOG00000026132) #24	PTPA (ENSCPOG00000008300) #25	IER5L (ENSCPOG00000039268)	NTMT1 (ENSCPOG00000031361) #29	ASB6 (ENSCPOG00000032241) #30	PRRX2 (ENSCPOG00000021821) #31	PTGES (ENSCPOG00000031288) #32	TOR1B (ENSCPOG00000025420) #33	TOR1A (ENSCPOG00000009275) #34	C9orf78 (ENSCPOG00000009285) #35	USP20 (ENSCPOG00000026238) #36	FNBP1 (ENSCPOG00000001166) #37	GPR107 (ENSCPOG00000006007)	ENSCPOG00000030593
Naked mole-rat female	MODERN SPECIES	3	PKN3 (ENSHGLG00000016146) #10	ZDHHC12 (ENSHGLG00000043046) #11	ZER1 (ENSHGLG00000013217) #12	TBC1D13 (ENSHGLG00000012272) #13	ENSHGLG00000012087	ENDOG (ENSHGLG00000011977) #14	SPOUT1 (ENSHGLG00000011378) #15	ENSHGLG00000010822 #16	ENSHGLG00000040009	ENSHGLG00000037099 #16	LRRC8A (ENSHGLG00000014722) #17	PHYHD1 (ENSHGLG00000014417) #18	DOLK (ENSHGLG00000039164) #19	NUP188 (ENSHGLG00000012467) #20	SH3GLB2 (ENSHGLG00000014397) #21	MIGA2 (ENSHGLG00000013304) #22	DOLPP1 (ENSHGLG00000012391) #23	CRAT (ENSHGLG00000013123) #24	PTPA (ENSHGLG00000012591) #25	IER5L (ENSHGLG00000042666)	ENSHGLG00000044327 #28	NTMT1 (ENSHGLG00000032402) #29	ASB6 (ENSHGLG00000012158) #30	PRRX2 (ENSHGLG00000032845) #31	PTGES (ENSHGLG00000047895) #32	TOR1B (ENSHGLG00000037837) #33	TOR1A (ENSHGLG00000012267) #34	ENSHGLG00000042396 #35	USP20 (ENSHGLG00000011412) #36	FNBP1 (ENSHGLG00000011382) #37	GPR107 (ENSHGLG00000018735)
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Marmotini	ANCESTRAL SPECIES	1	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000154891 #9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787.c #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000163010
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00940000158483 #8	ENSGT00940000153877.h.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155114.bb.b	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787.c #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Arctic ground squirrel	MODERN SPECIES	44	PKN3 (ENSUPAG00010017678) #10	ZDHHC12 (ENSUPAG00010017701) #11	ZER1 (ENSUPAG00010017706) #12	TBC1D13 (ENSUPAG00010017721) #13	ENDOG (ENSUPAG00010017748) #14	SPOUT1 (ENSUPAG00010017751) #15	KYAT1 (ENSUPAG00010017771) #16	LRRC8A (ENSUPAG00010017850) #17	PHYHD1 (ENSUPAG00010017863) #18	DOLK (ENSUPAG00010017872) #19	NUP188 (ENSUPAG00010017876) #20	ENSUPAG00010017952	ENSUPAG00010017953	SH3GLB2 (ENSUPAG00010017959) #21	ENSUPAG00010018058	MIGA2 (ENSUPAG00010018065) #22	DOLPP1 (ENSUPAG00010018078) #23	CRAT (ENSUPAG00010018086) #24	PTPA (ENSUPAG00010018100) #25	IER5L (ENSUPAG00010018173)	NTMT1 (ENSUPAG00010018204) #29	ASB6 (ENSUPAG00010018209) #30	PRRX2 (ENSUPAG00010018215) #31	ENSUPAG00010018223 #32	TOR1B (ENSUPAG00010018227) #33	TOR1A (ENSUPAG00010018233) #34	C9orf78 (ENSUPAG00010018240) #35	USP20 (ENSUPAG00010018244) #36	FNBP1 (ENSUPAG00010018326) #37	GPR107 (ENSUPAG00010019131)	NCS1 (ENSUPAG00010019150)
Squirrel	MODERN SPECIES	87	DYNC2I2 (ENSSTOG00000010534) #8	ENSSTOG00000010546	PKN3 (ENSSTOG00000010555) #10	ZDHHC12 (ENSSTOG00000010570) #11	ZER1 (ENSSTOG00000009393) #12	TBC1D13 (ENSSTOG00000000112) #13	ENDOG (ENSSTOG00000022690) #14	SPOUT1 (ENSSTOG00000015657) #15	KYAT1 (ENSSTOG00000026320) #16	LRRC8A (ENSSTOG00000002088) #17	PHYHD1 (ENSSTOG00000002098) #18	DOLK (ENSSTOG00000019536) #19	NUP188 (ENSSTOG00000002110) #20	ENSSTOG00000029495	SH3GLB2 (ENSSTOG00000002154) #21	MIGA2 (ENSSTOG00000002167) #22	DOLPP1 (ENSSTOG00000020568) #23	CRAT (ENSSTOG00000001489) #24	PTPA (ENSSTOG00000001500) #25	IER5L (ENSSTOG00000022813)	NTMT1 (ENSSTOG00000027423) #29	ASB6 (ENSSTOG00000025302) #30	PTGES (ENSSTOG00000004909) #32	TOR1B (ENSSTOG00000004915) #33	TOR1A (ENSSTOG00000020075) #34	ENSSTOG00000020630 #35	USP20 (ENSSTOG00000005418) #36	FNBP1 (ENSSTOG00000013583) #37	GPR107 (ENSSTOG00000024511)	ENSSTOG00000025494	ASS1 (ENSSTOG00000011597)
Alpin marmot	MODERN SPECIES	47	DYNC2I2 (ENSMMMG00000013692) #8	ENSMMMG00000013669 #9	PKN3 (ENSMMMG00000013641) #10	ZDHHC12 (ENSMMMG00000013627) #11	ZER1 (ENSMMMG00000013601) #12	TBC1D13 (ENSMMMG00000013588) #13	ENDOG (ENSMMMG00000013572) #14	SPOUT1 (ENSMMMG00000013550) #15	KYAT1 (ENSMMMG00000013394) #16	LRRC8A (ENSMMMG00000013383) #17	PHYHD1 (ENSMMMG00000013375) #18	DOLK (ENSMMMG00000013371) #19	ENSMMMG00000013349	NUP188 (ENSMMMG00000013287) #20	SH3GLB2 (ENSMMMG00000013101) #21	MIGA2 (ENSMMMG00000013083) #22	DOLPP1 (ENSMMMG00000013055) #23	CRAT (ENSMMMG00000013035) #24	PTPA (ENSMMMG00000013016) #25	NTMT1 (ENSMMMG00000012994) #29	ASB6 (ENSMMMG00000012990) #30	PRRX2 (ENSMMMG00000012985) #31	ENSMMMG00000012968 #32	TOR1B (ENSMMMG00000012963) #33	TOR1A (ENSMMMG00000012961) #34	C9orf78 (ENSMMMG00000012948) #35	USP20 (ENSMMMG00000012884) #36	FNBP1 (ENSMMMG00000012220) #37	GPR107 (ENSMMMG00000012179)	ENSMMMG00000012162	HMCN2 (ENSMMMG00000012024)
Eurasian red squirrel	MODERN SPECIES	6	ENSSVLG00005023763	DYNC2I2 (ENSSVLG00005023796) #8	ENSSVLG00005023905	PKN3 (ENSSVLG00005024092) #10	ZDHHC12 (ENSSVLG00005024113) #11	ZER1 (ENSSVLG00005024151) #12	TBC1D13 (ENSSVLG00005024185) #13	ENDOG (ENSSVLG00005024228) #14	SPOUT1 (ENSSVLG00005024260) #15	KYAT1 (ENSSVLG00005024316) #16	LRRC8A (ENSSVLG00005024426) #17	PHYHD1 (ENSSVLG00005024460) #18	DOLK (ENSSVLG00005024482) #19	NUP188 (ENSSVLG00005024536) #20	SH3GLB2 (ENSSVLG00005024592) #21	MIGA2 (ENSSVLG00005024675) #22	DOLPP1 (ENSSVLG00005024709) #23	CRAT (ENSSVLG00005024746) #24	PTPA (ENSSVLG00005024810) #25	IER5L (ENSSVLG00005024876)	NTMT1 (ENSSVLG00005024942) #29	ASB6 (ENSSVLG00005024994) #30	PRRX2 (ENSSVLG00005025019) #31	PTGES (ENSSVLG00005025037) #32	TOR1B (ENSSVLG00005025056) #33	TOR1A (ENSSVLG00005025074) #34	C9orf78 (ENSSVLG00005025097) #35	USP20 (ENSSVLG00005025130) #36	FNBP1 (ENSSVLG00005025181) #37	GPR107 (ENSSVLG00005025232)	NCS1 (ENSSVLG00005025273)
Lagomorpha	ANCESTRAL SPECIES	194				ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25
Pika	MODERN SPECIES	1432												LRRC8A (ENSOPRG00000016840) #17	ENSOPRG00000016847 #18	NUP188 (ENSOPRG00000016863) #20	SH3GLB2 (ENSOPRG00000016887) #21	MIGA2 (ENSOPRG00000016901) #22	DOLPP1 (ENSOPRG00000016912) #23	CRAT (ENSOPRG00000016918) #24
Rabbit	MODERN SPECIES	855												PHYHD1 (ENSOCUG00000004894) #18	DOLK (ENSOCUG00000000321) #19	NUP188 (ENSOCUG00000000323) #20	SH3GLB2 (ENSOCUG00000000328) #21	MIGA2 (ENSOCUG00000012585) #22	DOLPP1 (ENSOCUG00000027372) #23	ENSOCUG00000030451 #24	ENSOCUG00000003042 #25
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Cetacea	ANCESTRAL SPECIES	9	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.c.a.a	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.c.a.a	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Odontoceti_a	ANCESTRAL SPECIES	19	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.c.a.a	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.c.a.a	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.c.a.a	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Narwhal	MODERN SPECIES	312	SPTAN1 (ENSMMNG00015012399) #7	DYNC2I2 (ENSMMNG00015012768) #8	ENSMMNG00015012809	PKN3 (ENSMMNG00015012862) #10	ZDHHC12 (ENSMMNG00015012907) #11	ZER1 (ENSMMNG00015012922) #12	TBC1D13 (ENSMMNG00015012949) #13	ENDOG (ENSMMNG00015012965) #14	SPOUT1 (ENSMMNG00015012974) #15	KYAT1 (ENSMMNG00015013000) #16	LRRC8A (ENSMMNG00015013024) #17	PHYHD1 (ENSMMNG00015013052) #18	DOLK (ENSMMNG00015013067) #19	NUP188 (ENSMMNG00015013093) #20	SH3GLB2 (ENSMMNG00015013170) #21	MIGA2 (ENSMMNG00015013206) #22	DOLPP1 (ENSMMNG00015013232) #23	CRAT (ENSMMNG00015013262) #24	PTPA (ENSMMNG00015013319) #25	IER5L (ENSMMNG00015013356)	NTMT1 (ENSMMNG00015013386) #29	ASB6 (ENSMMNG00015013409) #30	PRRX2 (ENSMMNG00015013430) #31	PTGES (ENSMMNG00015013439) #32	TOR1B (ENSMMNG00015013447) #33	TOR1A (ENSMMNG00015013457) #34	C9orf78 (ENSMMNG00015013471) #35	USP20 (ENSMMNG00015013546) #36	FNBP1 (ENSMMNG00015013587) #37	GPR107 (ENSMMNG00015013685)	NCS1 (ENSMMNG00015013771)
Beluga whale	MODERN SPECIES	19	DYNC2I2 (ENSDLEG00000010796) #8	SET (ENSDLEG00000010550)	PKN3 (ENSDLEG00000010355) #10	ZDHHC12 (ENSDLEG00000010316) #11	ZER1 (ENSDLEG00000010294) #12	TBC1D13 (ENSDLEG00000010257) #13	ENDOG (ENSDLEG00000010240) #14	SPOUT1 (ENSDLEG00000010049) #15	KYAT1 (ENSDLEG00000009805) #16	LRRC8A (ENSDLEG00000009771) #17	PHYHD1 (ENSDLEG00000009397) #18	DOLK (ENSDLEG00000009354) #19	ENSDLEG00000009341 #20	NUP188 (ENSDLEG00000009305) #20	SH3GLB2 (ENSDLEG00000009248) #21	MIGA2 (ENSDLEG00000008905) #22	DOLPP1 (ENSDLEG00000008739) #23	CRAT (ENSDLEG00000008696) #24	PTPA (ENSDLEG00000008669) #25	IER5L (ENSDLEG00000008658)	NTMT1 (ENSDLEG00000008638) #29	ASB6 (ENSDLEG00000008611) #30	PRRX2 (ENSDLEG00000008586) #31	PTGES (ENSDLEG00000008564) #32	TOR1B (ENSDLEG00000008537) #33	TOR1A (ENSDLEG00000008413) #34	C9orf78 (ENSDLEG00000008371) #35	ENSDLEG00000008329	USP20 (ENSDLEG00000006766) #36	FNBP1 (ENSDLEG00000006640) #37	GPR107 (ENSDLEG00000006525)
Vaquita	MODERN SPECIES	17	SPTAN1 (ENSPSNG00000016557) #7	DYNC2I2 (ENSPSNG00000016254) #8	ENSPSNG00000016095	PKN3 (ENSPSNG00000016019) #10	ZDHHC12 (ENSPSNG00000015940) #11	ZER1 (ENSPSNG00000015866) #12	TBC1D13 (ENSPSNG00000015769) #13	ENDOG (ENSPSNG00000015699) #14	SPOUT1 (ENSPSNG00000015652) #15	KYAT1 (ENSPSNG00000015552) #16	LRRC8A (ENSPSNG00000015488) #17	PHYHD1 (ENSPSNG00000015374) #18	DOLK (ENSPSNG00000015343) #19	NUP188 (ENSPSNG00000015265) #20	SH3GLB2 (ENSPSNG00000015075) #21	MIGA2 (ENSPSNG00000014951) #22	DOLPP1 (ENSPSNG00000014843) #23	CRAT (ENSPSNG00000014741) #24	PTPA (ENSPSNG00000014434) #25	IER5L (ENSPSNG00000014381)	NTMT1 (ENSPSNG00000014051) #29	ASB6 (ENSPSNG00000013921) #30	PRRX2 (ENSPSNG00000013844) #31	ENSPSNG00000013801	PTGES (ENSPSNG00000013757) #32	TOR1B (ENSPSNG00000013681) #33	TOR1A (ENSPSNG00000013609) #34	ENSPSNG00000013547	USP20 (ENSPSNG00000013440) #36	ENSPSNG00000013402	FNBP1 (ENSPSNG00000013220) #37
Dolphin	MODERN SPECIES	1677	GLE1 (ENSTTRG00000011590)	SPTAN1 (ENSTTRG00000011598) #7	DYNC2I2 (ENSTTRG00000011604) #8	SET (ENSTTRG00000011605)	PKN3 (ENSTTRG00000011606) #10	ZDHHC12 (ENSTTRG00000011607) #11	ZER1 (ENSTTRG00000011609) #12	TBC1D13 (ENSTTRG00000011612) #13	ENDOG (ENSTTRG00000011615) #14	SPOUT1 (ENSTTRG00000011616) #15	KYAT1 (ENSTTRG00000011617) #16	LRRC8A (ENSTTRG00000011618) #17	PHYHD1 (ENSTTRG00000011619) #18	NUP188 (ENSTTRG00000011621) #20	SH3GLB2 (ENSTTRG00000011622) #21	MIGA2 (ENSTTRG00000011623) #22	DOLPP1 (ENSTTRG00000011624) #23	CRAT (ENSTTRG00000011625) #24
Sperm whale	MODERN SPECIES	153															ENSPCTG00005020514 #21	MIGA2 (ENSPCTG00005020489) #22	DOLPP1 (ENSPCTG00005020446) #23	CRAT (ENSPCTG00005020380) #24	ENSPCTG00005020282 #25
Blue whale	MODERN SPECIES	17	SPTAN1 (ENSBMSG00010016675) #7	DYNC2I2 (ENSBMSG00010016989) #8	ENSBMSG00010017098	PKN3 (ENSBMSG00010017783) #10	ZDHHC12 (ENSBMSG00010017813) #11	ZER1 (ENSBMSG00010017848) #12	TBC1D13 (ENSBMSG00010017884) #13	ENDOG (ENSBMSG00010017915) #14	SPOUT1 (ENSBMSG00010017933) #15	KYAT1 (ENSBMSG00010017962) #16	LRRC8A (ENSBMSG00010018009) #17	PHYHD1 (ENSBMSG00010018043) #18	DOLK (ENSBMSG00010018209) #19	NUP188 (ENSBMSG00010018236) #20	SH3GLB2 (ENSBMSG00010018286) #21	MIGA2 (ENSBMSG00010018398) #22	DOLPP1 (ENSBMSG00010018436) #23	CRAT (ENSBMSG00010018484) #24	PTPA (ENSBMSG00010018546) #25	NTMT1 (ENSBMSG00010018666) #29	ASB6 (ENSBMSG00010018696) #30	PRRX2 (ENSBMSG00010018742) #31	PTGES (ENSBMSG00010018766) #32	ENSBMSG00010018780	ENSBMSG00010018792 #33	TOR1A (ENSBMSG00010018817) #34	C9orf78 (ENSBMSG00010018839) #35	USP20 (ENSBMSG00010018877) #36	FNBP1 (ENSBMSG00010018996) #37	GPR107 (ENSBMSG00010019745)	NCS1 (ENSBMSG00010019809)
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.f	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Yarkand deer	MODERN SPECIES	2	GLE1 (ENSCHYG00000006491)	SPTAN1 (ENSCHYG00000006836) #7	DYNC2I2 (ENSCHYG00000010542) #8	PKN3 (ENSCHYG00000010695) #10	ZDHHC12 (ENSCHYG00000010984) #11	ZER1 (ENSCHYG00000011062) #12	TBC1D13 (ENSCHYG00000011188) #13	ENDOG (ENSCHYG00000011462) #14	SPOUT1 (ENSCHYG00000011505) #15	KYAT1 (ENSCHYG00000011630) #16	LRRC8A (ENSCHYG00000011822) #17	PHYHD1 (ENSCHYG00000011859) #18	DOLK (ENSCHYG00000012107) #19	NUP188 (ENSCHYG00000012137) #20	SH3GLB2 (ENSCHYG00000012467) #21	MIGA2 (ENSCHYG00000012701) #22	ENSCHYG00000012923	DOLPP1 (ENSCHYG00000012953) #23	CRAT (ENSCHYG00000013075) #24	PTPA (ENSCHYG00000013480) #25	ENSCHYG00000013946	ENSCHYG00000013989 #28	NTMT1 (ENSCHYG00000014079) #29	ASB6 (ENSCHYG00000014174) #30	PRRX2 (ENSCHYG00000014462) #31	PTGES (ENSCHYG00000014522) #32	TOR1B (ENSCHYG00000014590) #33	TOR1A (ENSCHYG00000014636) #34	C9orf78 (ENSCHYG00000014673) #35	USP20 (ENSCHYG00000014904) #36	FNBP1 (ENSCHYG00000015180) #37
Percora_a	ANCESTRAL SPECIES	27	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.f	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.f	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Caprinae	ANCESTRAL SPECIES	27	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.f	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00390000009272.d	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Rambouillet Sheep	MODERN SPECIES	19	PKN3 (ENSOARG00020003449) #10	ZDHHC12 (ENSOARG00020003413) #11	ZER1 (ENSOARG00020003376) #12	TBC1D13 (ENSOARG00020003183) #13	ENDOG (ENSOARG00020003159) #14	SPOUT1 (ENSOARG00020003141) #15	ENSOARG00020003083 #16	ENSOARG00020003005 #16	ENSOARG00020002857 #16	ENSOARG00020002784 #16	LRRC8A (ENSOARG00020002765) #17	PHYHD1 (ENSOARG00020002721) #18	DOLK (ENSOARG00020002707) #19	NUP188 (ENSOARG00020002629) #20	SH3GLB2 (ENSOARG00020002386) #21	MIGA2 (ENSOARG00020002349) #22	DOLPP1 (ENSOARG00020002325) #23	CRAT (ENSOARG00020002283) #24	IER5L (ENSOARG00020002265)	PTPA (ENSOARG00020002160) #25	ENSOARG00020002124 #28	NTMT1 (ENSOARG00020002110) #29	ASB6 (ENSOARG00020002047) #30	PRRX2 (ENSOARG00020002017) #31	PTGES (ENSOARG00020002004) #32	TOR1B (ENSOARG00020001999) #33	TOR1A (ENSOARG00020001959) #34	C9orf78 (ENSOARG00020001935) #35	USP20 (ENSOARG00020001868) #36	FNBP1 (ENSOARG00020001812) #37	GPR107 (ENSOARG00020001668)
Goat	MODERN SPECIES	2	SPTAN1 (ENSCHIG00000013404) #7	DYNC2I2 (ENSCHIG00000019844) #8	SET (ENSCHIG00000027039)	PKN3 (ENSCHIG00000018757) #10	ZDHHC12 (ENSCHIG00000026386) #11	ZER1 (ENSCHIG00000024803) #12	TBC1D13 (ENSCHIG00000013669) #13	ENDOG (ENSCHIG00000020781) #14	SPOUT1 (ENSCHIG00000010025) #15	KYAT1 (ENSCHIG00000015959) #16	LRRC8A (ENSCHIG00000003097) #17	PHYHD1 (ENSCHIG00000025025) #18	DOLK (ENSCHIG00000013790) #19	NUP188 (ENSCHIG00000017195) #20	SH3GLB2 (ENSCHIG00000023738) #21	MIGA2 (ENSCHIG00000021488) #22	DOLPP1 (ENSCHIG00000022790) #23	CRAT (ENSCHIG00000016047) #24	PTPA (ENSCHIG00000018428) #25	IER5L (ENSCHIG00000007780)	NTMT1 (ENSCHIG00000008995) #29	ASB6 (ENSCHIG00000023406) #30	PRRX2 (ENSCHIG00000024682) #31	PTGES (ENSCHIG00000024614) #32	ENSCHIG00000012306	TOR1B (ENSCHIG00000015527) #33	TOR1A (ENSCHIG00000020435) #34	C9orf78 (ENSCHIG00000027025) #35	ENSCHIG00000024518	USP20 (ENSCHIG00000017589) #36	FNBP1 (ENSCHIG00000027203) #37
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.f.c.a.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
American bison	MODERN SPECIES	3289	SPTAN1 (ENSBBBG00000023772) #7	DYNC2I2 (ENSBBBG00000023833) #8	ENSBBBG00000023873	PKN3 (ENSBBBG00000023895) #10	ZDHHC12 (ENSBBBG00000023918) #11	ZER1 (ENSBBBG00000008636) #12	TBC1D13 (ENSBBBG00000008976) #13	ENDOG (ENSBBBG00000024001) #14	ENSBBBG00000024012 #15	KYAT1 (ENSBBBG00000024044) #16	LRRC8A (ENSBBBG00000024057) #17	PHYHD1 (ENSBBBG00000024125) #18	DOLK (ENSBBBG00000024142) #19	NUP188 (ENSBBBG00000024205) #20	SH3GLB2 (ENSBBBG00000006349) #21	MIGA2 (ENSBBBG00000024426) #22	DOLPP1 (ENSBBBG00000024469) #23	CRAT (ENSBBBG00000009013) #24	PTPA (ENSBBBG00000006472) #25	ENSBBBG00000007715	ENSBBBG00000006483 #28	ENSBBBG00000024718 #29	ASB6 (ENSBBBG00000024779) #30	PRRX2 (ENSBBBG00000024797) #31	PTGES (ENSBBBG00000006527) #32	TOR1B (ENSBBBG00000024827) #33	TOR1A (ENSBBBG00000006539) #34	C9orf78 (ENSBBBG00000006821) #35	USP20 (ENSBBBG00000024987) #36	FNBP1 (ENSBBBG00000025211) #37	GPR107 (ENSBBBG00000025414)
Bos	ANCESTRAL SPECIES	5	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.f.c.a.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Bos_b	ANCESTRAL SPECIES	16	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h.f.d	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Cow	MODERN SPECIES	2	DYNC2I2 (ENSBTAG00000015343) #8	SET (ENSBTAG00000020959)	PKN3 (ENSBTAG00000010195) #10	ZDHHC12 (ENSBTAG00000030540) #11	ZER1 (ENSBTAG00000010208) #12	TBC1D13 (ENSBTAG00000012480) #13	ENDOG (ENSBTAG00000012484) #14	SPOUT1 (ENSBTAG00000012485) #15	KYAT1 (ENSBTAG00000036101) #16	ENSBTAG00000036099 #16	LRRC8A (ENSBTAG00000013030) #17	PHYHD1 (ENSBTAG00000038831) #18	DOLK (ENSBTAG00000010601) #19	NUP188 (ENSBTAG00000010613) #20	SH3GLB2 (ENSBTAG00000010626) #21	MIGA2 (ENSBTAG00000010653) #22	DOLPP1 (ENSBTAG00000017922) #23	CRAT (ENSBTAG00000001932) #24	PTPA (ENSBTAG00000001933) #25	IER5L (ENSBTAG00000030521)	C11H9orf50 (ENSBTAG00000019513) #28	NTMT1 (ENSBTAG00000015437) #29	ASB6 (ENSBTAG00000008973) #30	PRRX2 (ENSBTAG00000002936) #31	PTGES (ENSBTAG00000019453) #32	TOR1B (ENSBTAG00000002837) #33	TOR1A (ENSBTAG00000020305) #34	C11H9orf78 (ENSBTAG00000020307) #35	USP20 (ENSBTAG00000020311) #36	FNBP1 (ENSBTAG00000020313) #37	GPR107 (ENSBTAG00000004204)
Hybrid Bos Indicus	MODERN SPECIES	2	DYNC2I2 (ENSBIXG00005014302) #8	ENSBIXG00005014268	PKN3 (ENSBIXG00005014132) #10	ZDHHC12 (ENSBIXG00005014111) #11	ZER1 (ENSBIXG00005007117) #12	TBC1D13 (ENSBIXG00005001821) #13	ENDOG (ENSBIXG00005014033) #14	SPOUT1 (ENSBIXG00005014021) #15	ENSBIXG00005013976 #16	ENSBIXG00005013947 #16	LRRC8A (ENSBIXG00005001742) #17	PHYHD1 (ENSBIXG00005013866) #18	DOLK (ENSBIXG00005013832) #19	NUP188 (ENSBIXG00005013805) #20	SH3GLB2 (ENSBIXG00005013756) #21	MIGA2 (ENSBIXG00005013669) #22	CRAT (ENSBIXG00005013617) #24	ENSBIXG00005001649	DOLPP1 (ENSBIXG00005013539) #23	PTPA (ENSBIXG00005013492) #25	C9orf50 (ENSBIXG00005013399) #28	NTMT1 (ENSBIXG00005001602) #29	ASB6 (ENSBIXG00005013359) #30	PRRX2 (ENSBIXG00005013316) #31	PTGES (ENSBIXG00005013306) #32	TOR1B (ENSBIXG00005013295) #33	TOR1A (ENSBIXG00005006429) #34	C9orf78 (ENSBIXG00005013272) #35	USP20 (ENSBIXG00005013251) #36	ENSBIXG00005013221	FNBP1 (ENSBIXG00005013167) #37
Bos_a	ANCESTRAL SPECIES	23	ENSGT00940000158483 #8	ENSGT00940000153877.h.f.c.a.b	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00960000192839.b	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Wild yak	MODERN SPECIES	2293											LRRC8A (ENSBMUG00000000716) #17	PHYHD1 (ENSBMUG00000000812) #18	DOLK (ENSBMUG00000000836) #19	NUP188 (ENSBMUG00000000866) #20	SH3GLB2 (ENSBMUG00000000898) #21	MIGA2 (ENSBMUG00000000929) #22	DOLPP1 (ENSBMUG00000000945) #23	CRAT (ENSBMUG00000000992) #24	PTPA (ENSBMUG00000001090) #25	ENSBMUG00000001148	C9orf50 (ENSBMUG00000001159) #28	NTMT1 (ENSBMUG00000001171) #29	ASB6 (ENSBMUG00000001201) #30	PRRX2 (ENSBMUG00000001222) #31	PTGES (ENSBMUG00000001227) #32	TOR1B (ENSBMUG00000001237) #33	TOR1A (ENSBMUG00000001248) #34	C9orf78 (ENSBMUG00000001254) #35	ENSBMUG00000001269	USP20 (ENSBMUG00000001290) #36	FNBP1 (ENSBMUG00000001477) #37
Domestic yak	MODERN SPECIES	28	PKN3 (ENSBGRG00000014325) #10	ZDHHC12 (ENSBGRG00000014417) #11	ZER1 (ENSBGRG00000014532) #12	TBC1D13 (ENSBGRG00000014747) #13	ENDOG (ENSBGRG00000015041) #14	SPOUT1 (ENSBGRG00000015119) #15	KYAT1 (ENSBGRG00000015519) #16	ENSBGRG00000015866	ENSBGRG00000015915	LRRC8A (ENSBGRG00000015966) #17	PHYHD1 (ENSBGRG00000016017) #18	DOLK (ENSBGRG00000016243) #19	NUP188 (ENSBGRG00000016320) #20	SH3GLB2 (ENSBGRG00000016771) #21	ENSBGRG00000017158	MIGA2 (ENSBGRG00000017203) #22	DOLPP1 (ENSBGRG00000017351) #23	CRAT (ENSBGRG00000017531) #24	PTPA (ENSBGRG00000017696) #25	IER5L (ENSBGRG00000018629)	ENSBGRG00000018655 #28	NTMT1 (ENSBGRG00000018724) #29	ASB6 (ENSBGRG00000018789) #30	PRRX2 (ENSBGRG00000019047) #31	PTGES (ENSBGRG00000019070) #32	TOR1B (ENSBGRG00000019140) #33	TOR1A (ENSBGRG00000019204) #34	C9orf78 (ENSBGRG00000019238) #35	USP20 (ENSBGRG00000006274) #36	ENSBGRG00000006503	FNBP1 (ENSBGRG00000006540) #37
Siberian musk deer	MODERN SPECIES	1178	SPTAN1 (ENSMMSG00000022626) #7	DYNC2I2 (ENSMMSG00000022692) #8	SET (ENSMMSG00000022708)	ENSMMSG00000022721	PKN3 (ENSMMSG00000022736) #10	ZDHHC12 (ENSMMSG00000004629) #11	ZER1 (ENSMMSG00000004684) #12	TBC1D13 (ENSMMSG00000004774) #13	ENDOG (ENSMMSG00000004878) #14	SPOUT1 (ENSMMSG00000004947) #15	KYAT1 (ENSMMSG00000005035) #16	LRRC8A (ENSMMSG00000005081) #17	NUP188 (ENSMMSG00000005172) #20	DOLK (ENSMMSG00000005645) #19	SH3GLB2 (ENSMMSG00000005680) #21	MIGA2 (ENSMMSG00000005812) #22	DOLPP1 (ENSMMSG00000005885) #23	CRAT (ENSMMSG00000005945) #24	PTPA (ENSMMSG00000006019) #25	IER5L (ENSMMSG00000006145)	ENSMMSG00000006154 #28	NTMT1 (ENSMMSG00000006173) #29	ASB6 (ENSMMSG00000006212) #30	PRRX2 (ENSMMSG00000006283) #31	PTGES (ENSMMSG00000006301) #32	TOR1B (ENSMMSG00000006315) #33	TOR1A (ENSMMSG00000006335) #34	ENSMMSG00000006362 #35	USP20 (ENSMMSG00000006424) #36	FNBP1 (ENSMMSG00000006573) #37	GPR107 (ENSMMSG00000006768)
Camelidae	ANCESTRAL SPECIES	5	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000156902 #11	ENSGT00940000161818 #10	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Arabian camel	MODERN SPECIES	30	SPTAN1 (ENSCDRG00005002078) #7	DYNC2I2 (ENSCDRG00005001966) #8	SET (ENSCDRG00005001835)	PKN3 (ENSCDRG00005001760) #10	ZDHHC12 (ENSCDRG00005001723) #11	ZER1 (ENSCDRG00005001674) #12	TBC1D13 (ENSCDRG00005001632) #13	ENDOG (ENSCDRG00005001612) #14	SPOUT1 (ENSCDRG00005001575) #15	KYAT1 (ENSCDRG00005001537) #16	LRRC8A (ENSCDRG00005001521) #17	PHYHD1 (ENSCDRG00005001492) #18	DOLK (ENSCDRG00005001463) #19	NUP188 (ENSCDRG00005001373) #20	SH3GLB2 (ENSCDRG00005000966) #21	MIGA2 (ENSCDRG00005000850) #22	DOLPP1 (ENSCDRG00005000798) #23	CRAT (ENSCDRG00005000748) #24	PTPA (ENSCDRG00005000589) #25	IER5L (ENSCDRG00005000555)	C9orf50 (ENSCDRG00005000533) #28	NTMT1 (ENSCDRG00005000506) #29	ASB6 (ENSCDRG00005000474) #30	PRRX2 (ENSCDRG00005000450) #31	PTGES (ENSCDRG00005000446) #32	TOR1B (ENSCDRG00005000429) #33	TOR1A (ENSCDRG00005000415) #34	C9orf78 (ENSCDRG00005000393) #35	ENSCDRG00005000380	USP20 (ENSCDRG00005000329) #36	FNBP1 (ENSCDRG00005000106) #37
Suina	ANCESTRAL SPECIES	37	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Pig	MODERN SPECIES		SPTAN1 (ENSSSCG00000005654) #7	DYNC2I2 (ENSSSCG00000005655) #8	ENSSSCG00000005656	PKN3 (ENSSSCG00000005657) #10	ZDHHC12 (ENSSSCG00000063201) #11	ZER1 (ENSSSCG00000005659) #12	TBC1D13 (ENSSSCG00000005660) #13	ENDOG (ENSSSCG00000005661) #14	SPOUT1 (ENSSSCG00000005662) #15	KYAT1 (ENSSSCG00000005663) #16	LRRC8A (ENSSSCG00000005664) #17	PHYHD1 (ENSSSCG00000005665) #18	DOLK (ENSSSCG00000005666) #19	NUP188 (ENSSSCG00000005667) #20	SH3GLB2 (ENSSSCG00000005668) #21	MIGA2 (ENSSSCG00000005669) #22	DOLPP1 (ENSSSCG00000031669) #23	CRAT (ENSSSCG00000005671) #24	PTPA (ENSSSCG00000005672) #25	IER5L (ENSSSCG00000005673)	NTMT1 (ENSSSCG00000005678) #29	ASB6 (ENSSSCG00000005679) #30	PRRX2 (ENSSSCG00000005680) #31	PTGES (ENSSSCG00000005688) #32	TOR1B (ENSSSCG00000005683) #33	TOR1A (ENSSSCG00000034518) #34	C9orf78 (ENSSSCG00000030426) #35	USP20 (ENSSSCG00000024341) #36	FNBP1 (ENSSSCG00000005689) #37	GPR107 (ENSSSCG00000038868)	NCS1 (ENSSSCG00000039311)
Chacoan peccary	MODERN SPECIES	887	SPTAN1 (ENSCWAG00000011579) #7	DYNC2I2 (ENSCWAG00000011266) #8	ENSCWAG00000011134	PKN3 (ENSCWAG00000010948) #10	ZDHHC12 (ENSCWAG00000010885) #11	ZER1 (ENSCWAG00000010856) #12	TBC1D13 (ENSCWAG00000010779) #13	ENDOG (ENSCWAG00000010746) #14	SPOUT1 (ENSCWAG00000010709) #15	KYAT1 (ENSCWAG00000010560) #16	LRRC8A (ENSCWAG00000010522) #17	PHYHD1 (ENSCWAG00000010444) #18	DOLK (ENSCWAG00000010424) #19	NUP188 (ENSCWAG00000010345) #20	SH3GLB2 (ENSCWAG00000010090) #21	MIGA2 (ENSCWAG00000010018) #22	DOLPP1 (ENSCWAG00000009948) #23	CRAT (ENSCWAG00000009778) #24	PTPA (ENSCWAG00000009497) #25	IER5L (ENSCWAG00000009460)	NTMT1 (ENSCWAG00000009246) #29	ASB6 (ENSCWAG00000009110) #30	PRRX2 (ENSCWAG00000009077) #31	PTGES (ENSCWAG00000009041) #32	TOR1B (ENSCWAG00000009005) #33	TOR1A (ENSCWAG00000008965) #34	C9orf78 (ENSCWAG00000008931) #35	USP20 (ENSCWAG00000008895) #36	FNBP1 (ENSCWAG00000008670) #37	GPR107 (ENSCWAG00000008440)	NCS1 (ENSCWAG00000008387)
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Carnivora	ANCESTRAL SPECIES	18	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Caniformia	ANCESTRAL SPECIES	16	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Caniformia_b	ANCESTRAL SPECIES	12	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000154891.e.a #9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Ursidae	ANCESTRAL SPECIES	6	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000154891.e.a #9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000163010
Ursus	ANCESTRAL SPECIES	15	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000154891.e.a #9	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000163010
American black bear	MODERN SPECIES	3200														NUP188 (ENSUAMG00000026350) #20	SH3GLB2 (ENSUAMG00000026333) #21	MIGA2 (ENSUAMG00000026332) #22	DOLPP1 (ENSUAMG00000026331) #23	CRAT (ENSUAMG00000026330) #24
Polar bear	MODERN SPECIES	214	GLE1 (ENSUMAG00000021966)	SPTAN1 (ENSUMAG00000021103) #7	DYNC2I2 (ENSUMAG00000020934) #8	SETSIP (ENSUMAG00000020906) #9	PKN3 (ENSUMAG00000020842) #10	ZDHHC12 (ENSUMAG00000020825) #11	ZER1 (ENSUMAG00000020644) #12	TBC1D13 (ENSUMAG00000020633) #13	SPOUT1 (ENSUMAG00000020628) #15	KYAT1 (ENSUMAG00000020623) #16	LRRC8A (ENSUMAG00000020617) #17	PHYHD1 (ENSUMAG00000020615) #18	DOLK (ENSUMAG00000020613) #19	ENSUMAG00000020594 #20	SH3GLB2 (ENSUMAG00000020378) #21	MIGA2 (ENSUMAG00000020370) #22	ENSUMAG00000020366	CRAT (ENSUMAG00000020362) #24	PTPA (ENSUMAG00000020289) #25	NTMT1 (ENSUMAG00000020256) #29	ASB6 (ENSUMAG00000020240) #30	PRRX2 (ENSUMAG00000020232) #31	PTGES (ENSUMAG00000020230) #32	TOR1B (ENSUMAG00000020225) #33	TOR1A (ENSUMAG00000020220) #34	C9orf78 (ENSUMAG00000020215) #35	ENSUMAG00000020209 #36	FNBP1 (ENSUMAG00000019252) #37	GPR107 (ENSUMAG00000019019)	ENSUMAG00000018981	ENSUMAG00000018959
Giant Panda	MODERN SPECIES	17	GLE1 (ENSAMEG00000015537)	SPTAN1 (ENSAMEG00000015563) #7	DYNC2I2 (ENSAMEG00000015673) #8	ENSAMEG00000015686 #9	PKN3 (ENSAMEG00000015712) #10	ENSAMEG00000015755 #11	ZER1 (ENSAMEG00000015759) #12	TBC1D13 (ENSAMEG00000023701) #13	SPOUT1 (ENSAMEG00000015808) #15	KYAT1 (ENSAMEG00000015821) #16	LRRC8A (ENSAMEG00000015843) #17	PHYHD1 (ENSAMEG00000015846) #18	DOLK (ENSAMEG00000019109) #19	NUP188 (ENSAMEG00000015857) #20	SH3GLB2 (ENSAMEG00000015905) #21	MIGA2 (ENSAMEG00000015926) #22	DOLPP1 (ENSAMEG00000015935) #23	CRAT (ENSAMEG00000015939) #24	PTPA (ENSAMEG00000015969) #25	ENSAMEG00000025081	NTMT1 (ENSAMEG00000026209) #29	C9orf50 (ENSAMEG00000015986) #28	ASB6 (ENSAMEG00000015998) #30	PRRX2 (ENSAMEG00000016011) #31	PTGES (ENSAMEG00000031097) #32	TOR1B (ENSAMEG00000016018) #33	TOR1A (ENSAMEG00000016037) #34	C9orf78 (ENSAMEG00000016061) #35	USP20 (ENSAMEG00000016078) #36	FNBP1 (ENSAMEG00000016090) #37	GPR107 (ENSAMEG00000016130)
Mustelinae	ANCESTRAL SPECIES	12	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
American mink	MODERN SPECIES	182	SPTAN1 (ENSNVIG00000012859) #7	DYNC2I2 (ENSNVIG00000014869) #8	ENSNVIG00000014949 #9	PKN3 (ENSNVIG00000015008) #10	ZDHHC12 (ENSNVIG00000015192) #11	ZER1 (ENSNVIG00000015266) #12	TBC1D13 (ENSNVIG00000015384) #13	ENDOG (ENSNVIG00000015703) #14	SPOUT1 (ENSNVIG00000015760) #15	KYAT1 (ENSNVIG00000015951) #16	LRRC8A (ENSNVIG00000016088) #17	PHYHD1 (ENSNVIG00000016113) #18	DOLK (ENSNVIG00000016204) #19	NUP188 (ENSNVIG00000016213) #20	SH3GLB2 (ENSNVIG00000016272) #21	FA73B (ENSNVIG00000016393) #22	DOLPP1 (ENSNVIG00000016410) #23	CRAT (ENSNVIG00000016455) #24	PTPA (ENSNVIG00000016504) #25	NTMT1 (ENSNVIG00000016588) #29	ASB6 (ENSNVIG00000016615) #30	PRRX2 (ENSNVIG00000016658) #31	PTGES (ENSNVIG00000016663) #32	TOR1B (ENSNVIG00000016675) #33	TOR1A (ENSNVIG00000016693) #34	C9orf78 (ENSNVIG00000016711) #35	USP20 (ENSNVIG00000016742) #36	FNBP1 (ENSNVIG00000016798) #37	GPR107 (ENSNVIG00000017208)	ENSNVIG00000017368	HMCN2 (ENSNVIG00000017387)
Ferret	MODERN SPECIES	218	GLE1 (ENSMPUG00000013164)	SPTAN1 (ENSMPUG00000013143) #7	DYNC2I2 (ENSMPUG00000013139) #8	ENSMPUG00000013069	PKN3 (ENSMPUG00000013051) #10	ZDHHC12 (ENSMPUG00000013061) #11	ZER1 (ENSMPUG00000013041) #12	TBC1D13 (ENSMPUG00000013034) #13	ENDOG (ENSMPUG00000013024) #14	SPOUT1 (ENSMPUG00000013017) #15	KYAT1 (ENSMPUG00000013007) #16	LRRC8A (ENSMPUG00000012999) #17	DOLK (ENSMPUG00000019223) #19	NUP188 (ENSMPUG00000012985) #20	SH3GLB2 (ENSMPUG00000012981) #21	MIGA2 (ENSMPUG00000012978) #22	DOLPP1 (ENSMPUG00000012975) #23	CRAT (ENSMPUG00000012968) #24	PTPA (ENSMPUG00000012951) #25	IER5L (ENSMPUG00000012947)	C9orf50 (ENSMPUG00000012933) #28	NTMT1 (ENSMPUG00000012923) #29	ASB6 (ENSMPUG00000012917) #30	ENSMPUG00000012915	PRRX2 (ENSMPUG00000012909) #31	PTGES (ENSMPUG00000012906) #32	ENSMPUG00000019221	TOR1B (ENSMPUG00000012902) #33	ENSMPUG00000019217	C9orf78 (ENSMPUG00000012876) #35	USP20 (ENSMPUG00000012869) #36
Canidae	ANCESTRAL SPECIES	2	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00950000182802.B.a.a.a.a.i.d.c.a.a	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00950000182802.B.a.a.a.a.i.d.c.a.a	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37
Dog	MODERN SPECIES	37	SPTAN1 (ENSCAFG00845027492) #7	DYNC2I2 (ENSCAFG00845027324) #8	SET (ENSCAFG00845026963)	PKN3 (ENSCAFG00845026684) #10	ZDHHC12 (ENSCAFG00845026605) #11	ZER1 (ENSCAFG00845026245) #12	TBC1D13 (ENSCAFG00845026099) #13	ENDOG (ENSCAFG00845026038) #14	SPOUT1 (ENSCAFG00845025964) #15	KYAT1 (ENSCAFG00845025617) #16	LRRC8A (ENSCAFG00845025448) #17	PHYHD1 (ENSCAFG00845025344) #18	DOLK (ENSCAFG00845025311) #19	NUP188 (ENSCAFG00845025077) #20	SH3GLB2 (ENSCAFG00845024630) #21	MIGA2 (ENSCAFG00845024378) #22	DOLPP1 (ENSCAFG00845024281) #23	CRAT (ENSCAFG00845024111) #24	PTPA (ENSCAFG00845023830) #25	ENSCAFG00845023733	IER5L (ENSCAFG00845023709)	C9orf50 (ENSCAFG00845023660) #28	NTMT1 (ENSCAFG00845023587) #29	ASB6 (ENSCAFG00845023463) #30	PRRX2 (ENSCAFG00845023411) #31	PTGES (ENSCAFG00845023377) #32	TOR1B (ENSCAFG00845023333) #33	TOR1A (ENSCAFG00845023305) #34	C9orf78 (ENSCAFG00845023258) #35	USP20 (ENSCAFG00845023043) #36	FNBP1 (ENSCAFG00845022336) #37
Dingo	MODERN SPECIES	327	SPTAN1 (ENSCAFG00020020094) #7	DYNC2I2 (ENSCAFG00020022810) #8	SET (ENSCAFG00020022819)	PKN3 (ENSCAFG00020022824) #10	ZDHHC12 (ENSCAFG00020022850) #11	ZER1 (ENSCAFG00020022864) #12	TBC1D13 (ENSCAFG00020022951) #13	ENDOG (ENSCAFG00020022974) #14	SPOUT1 (ENSCAFG00020022980) #15	KYAT1 (ENSCAFG00020022992) #16	LRRC8A (ENSCAFG00020022997) #17	PHYHD1 (ENSCAFG00020023006) #18	DOLK (ENSCAFG00020023027) #19	NUP188 (ENSCAFG00020023102) #20	SH3GLB2 (ENSCAFG00020023573) #21	MIGA2 (ENSCAFG00020023580) #22	DOLPP1 (ENSCAFG00020023632) #23	CRAT (ENSCAFG00020023635) #24	ENSCAFG00020023640 #25	ENSCAFG00020023642 #25	ENSCAFG00020023644	IER5L (ENSCAFG00020023645)	ENSCAFG00020023649 #28	NTMT1 (ENSCAFG00020023651) #29	ASB6 (ENSCAFG00020023653) #30	PRRX2 (ENSCAFG00020023669) #31	PTGES (ENSCAFG00020023680) #32	TOR1B (ENSCAFG00020023687) #33	TOR1A (ENSCAFG00020023689) #34	C9orf78 (ENSCAFG00020023693) #35	USP20 (ENSCAFG00020023699) #36
Red fox	MODERN SPECIES	77	SPTAN1 (ENSVVUG00000016542) #7	DYNC2I2 (ENSVVUG00000025620) #8	SET (ENSVVUG00000025637)	PKN3 (ENSVVUG00000025667) #10	ZDHHC12 (ENSVVUG00000025833) #11	ZER1 (ENSVVUG00000025838) #12	TBC1D13 (ENSVVUG00000025967) #13	ENDOG (ENSVVUG00000025998) #14	SPOUT1 (ENSVVUG00000025999) #15	KYAT1 (ENSVVUG00000026017) #16	LRRC8A (ENSVVUG00000026053) #17	PHYHD1 (ENSVVUG00000026059) #18	DOLK (ENSVVUG00000026142) #19	NUP188 (ENSVVUG00000026171) #20	SH3GLB2 (ENSVVUG00000026951) #21	MIGA2 (ENSVVUG00000026980) #22	DOLPP1 (ENSVVUG00000027005) #23	CRAT (ENSVVUG00000027026) #24	PTPA (ENSVVUG00000027345) #25	ENSVVUG00000027372	ENSVVUG00000027374	ENSVVUG00000027383 #28	NTMT1 (ENSVVUG00000027389) #29	ASB6 (ENSVVUG00000027390) #30	PRRX2 (ENSVVUG00000027397) #31	PTGES (ENSVVUG00000027400) #32	TOR1B (ENSVVUG00000027404) #33	TOR1A (ENSVVUG00000027408) #34	CUNH9orf78 (ENSVVUG00000027415) #35	USP20 (ENSVVUG00000027434) #36	FNBP1 (ENSVVUG00000027452) #37
Felidae	ANCESTRAL SPECIES	16	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Panthera	ANCESTRAL SPECIES	11	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Tiger	MODERN SPECIES	121	GLE1 (ENSPTIG00000020770)	SPTAN1 (ENSPTIG00000021570) #7	DYNC2I2 (ENSPTIG00000018050) #8	SET (ENSPTIG00000019383)	PKN3 (ENSPTIG00000021126) #10	ZDHHC12 (ENSPTIG00000002433) #11	ZER1 (ENSPTIG00000006324) #12	TBC1D13 (ENSPTIG00000007577) #13	SPOUT1 (ENSPTIG00000010445) #15	KYAT1 (ENSPTIG00000011042) #16	LRRC8A (ENSPTIG00000014161) #17	PHYHD1 (ENSPTIG00000014637) #18	DOLK (ENSPTIG00000005843) #19	NUP188 (ENSPTIG00000017265) #20	SH3GLB2 (ENSPTIG00000019557) #21	MIGA2 (ENSPTIG00000021378) #22	DOLPP1 (ENSPTIG00000021629) #23	CRAT (ENSPTIG00000000984) #24	PTPA (ENSPTIG00000005396) #25	ENSPTIG00000011881	NTMT1 (ENSPTIG00000012394) #29	ASB6 (ENSPTIG00000016471) #30	ENSPTIG00000017128 #31	PTGES (ENSPTIG00000017624) #32	TOR1B (ENSPTIG00000018297) #33	TOR1A (ENSPTIG00000019171) #34	C9orf78 (ENSPTIG00000004001) #35	ENSPTIG00000005975 #36	FNBP1 (ENSPTIG00000008070) #37	GPR107 (ENSPTIG00000014552)	NCS1 (ENSPTIG00000016706)
Panthera_a	ANCESTRAL SPECIES	10	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
leopard	MODERN SPECIES	83	DYNC2I2 (ENSPPRG00000007430) #8	ENSPPRG00000010201	PKN3 (ENSPPRG00000011344) #10	ZDHHC12 (ENSPPRG00000012454) #11	ZER1 (ENSPPRG00000012995) #12	TBC1D13 (ENSPPRG00000013950) #13	ENDOG (ENSPPRG00000014165) #14	SPOUT1 (ENSPPRG00000014948) #15	KYAT1 (ENSPPRG00000019755) #16	LRRC8A (ENSPPRG00000021778) #17	PHYHD1 (ENSPPRG00000024842) #18	ENSPPRG00000021639 #19	ENSPPRG00000021650 #19	NUP188 (ENSPPRG00000023500) #20	SH3GLB2 (ENSPPRG00000001028) #21	MIGA2 (ENSPPRG00000001851) #22	DOLPP1 (ENSPPRG00000002953) #23	CRAT (ENSPPRG00000004484) #24	PTPA (ENSPPRG00000010217) #25	ENSPPRG00000014926	ENSPPRG00000014932	NTMT1 (ENSPPRG00000012689) #29	ASB6 (ENSPPRG00000014052) #30	PRRX2 (ENSPPRG00000017132) #31	PTGES (ENSPPRG00000018646) #32	TOR1B (ENSPPRG00000020142) #33	TOR1A (ENSPPRG00000021638) #34	C9orf78 (ENSPPRG00000000737) #35	USP20 (ENSPPRG00000002771) #36	FNBP1 (ENSPPRG00000005330) #37	GPR107 (ENSPPRG00000008226)
lion	MODERN SPECIES	13	DYNC2I2 (ENSPLOG00000015434) #8	SET (ENSPLOG00000015320)	PKN3 (ENSPLOG00000015084) #10	ZDHHC12 (ENSPLOG00000014971) #11	ZER1 (ENSPLOG00000014914) #12	TBC1D13 (ENSPLOG00000014777) #13	ENDOG (ENSPLOG00000014686) #14	SPOUT1 (ENSPLOG00000014556) #15	ENSPLOG00000014265 #16	LRRC8A (ENSPLOG00000014161) #17	PHYHD1 (ENSPLOG00000014084) #18	DOLK (ENSPLOG00000014046) #19	ENSPLOG00000014026	NUP188 (ENSPLOG00000013614) #20	SH3GLB2 (ENSPLOG00000013112) #21	MIGA2 (ENSPLOG00000012901) #22	DOLPP1 (ENSPLOG00000012829) #23	CRAT (ENSPLOG00000012767) #24	PTPA (ENSPLOG00000012391) #25	IER5L (ENSPLOG00000012283)	NTMT1 (ENSPLOG00000012032) #29	ASB6 (ENSPLOG00000011945) #30	PRRX2 (ENSPLOG00000011852) #31	ENSPLOG00000011806 #32	TOR1B (ENSPLOG00000011766) #33	ENSPLOG00000011711 #34	C9orf78 (ENSPLOG00000011661) #35	USP20 (ENSPLOG00000011587) #36	FNBP1 (ENSPLOG00000011409) #37	GPR107 (ENSPLOG00000010916)	ENSPLOG00000010826
Cat	MODERN SPECIES	244	SPTAN1 (ENSFCAG00000005846) #7	DYNC2I2 (ENSFCAG00000005847) #8	ENSFCAG00000005848	PKN3 (ENSFCAG00000005851) #10	ZDHHC12 (ENSFCAG00000005854) #11	ZER1 (ENSFCAG00000005856) #12	TBC1D13 (ENSFCAG00000005857) #13	ENDOG (ENSFCAG00000005859) #14	SPOUT1 (ENSFCAG00000030593) #15	KYAT1 (ENSFCAG00000005862) #16	LRRC8A (ENSFCAG00000005863) #17	PHYHD1 (ENSFCAG00000005865) #18	DOLK (ENSFCAG00000024940) #19	NUP188 (ENSFCAG00000005867) #20	SH3GLB2 (ENSFCAG00000005872) #21	MIGA2 (ENSFCAG00000005875) #22	DOLPP1 (ENSFCAG00000005877) #23	CRAT (ENSFCAG00000005880) #24	PTPA (ENSFCAG00000005882) #25	IER5L (ENSFCAG00000041138)	ENSFCAG00000025551	NTMT1 (ENSFCAG00000043209) #29	ASB6 (ENSFCAG00000004756) #30	PRRX2 (ENSFCAG00000004758) #31	PTGES (ENSFCAG00000004759) #32	TOR1A (ENSFCAG00000004760) #34	TOR1B (ENSFCAG00000008977) #33	CD4H9orf78 (ENSFCAG00000004761) #35	USP20 (ENSFCAG00000013549) #36	FNBP1 (ENSFCAG00000035160) #37	GPR107 (ENSFCAG00000005107)
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Equus	ANCESTRAL SPECIES	30	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Donkey	MODERN SPECIES	1	SPTAN1 (ENSEASG00005008947) #7	DYNC2I2 (ENSEASG00005008429) #8	SET (ENSEASG00005008414)	ZDHHC12 (ENSEASG00005030221) #11	PKN3 (ENSEASG00005008409) #10	ZER1 (ENSEASG00005007785) #12	TBC1D13 (ENSEASG00005007723) #13	ENDOG (ENSEASG00005007720) #14	SPOUT1 (ENSEASG00005007715) #15	KYAT1 (ENSEASG00005007709) #16	LRRC8A (ENSEASG00005007708) #17	PHYHD1 (ENSEASG00005007517) #18	DOLK (ENSEASG00005028058) #19	NUP188 (ENSEASG00005007542) #20	SH3GLB2 (ENSEASG00005008312) #21	MIGA2 (ENSEASG00005008322) #22	DOLPP1 (ENSEASG00005008330) #23	CRAT (ENSEASG00005008333) #24	PTPA (ENSEASG00005008338) #25	IER5L (ENSEASG00005008343)	C9orf50 (ENSEASG00005035028) #28	NTMT1 (ENSEASG00005008353) #29	ASB6 (ENSEASG00005008355) #30	PRRX2 (ENSEASG00005029413) #31	PTGES (ENSEASG00005028809) #32	TOR1B (ENSEASG00005008361) #33	TOR1A (ENSEASG00005037998) #34	C9orf78 (ENSEASG00005008364) #35	USP20 (ENSEASG00005008368) #36	FNBP1 (ENSEASG00005008374) #37	GPR107 (ENSEASG00005008388)
Horse	MODERN SPECIES	17	GLE1 (ENSECAG00000010980)	SPTAN1 (ENSECAG00000021297) #7	DYNC2I2 (ENSECAG00000024224) #8	SET (ENSECAG00000009117)	PKN3 (ENSECAG00000017351) #10	ZDHHC12 (ENSECAG00000012555) #11	ZER1 (ENSECAG00000015821) #12	TBC1D13 (ENSECAG00000007916) #13	ENDOG (ENSECAG00000009809) #14	SPOUT1 (ENSECAG00000010177) #15	KYAT1 (ENSECAG00000022067) #16	LRRC8A (ENSECAG00000013359) #17	DOLK (ENSECAG00000051192) #19	NUP188 (ENSECAG00000006134) #20	SH3GLB2 (ENSECAG00000004437) #21	MIGA2 (ENSECAG00000018283) #22	DOLPP1 (ENSECAG00000000463) #23	CRAT (ENSECAG00000010205) #24	PTPA (ENSECAG00000007349) #25	IER5L (ENSECAG00000035317)	C9orf50 (ENSECAG00000015026) #28	NTMT1 (ENSECAG00000015033) #29	ASB6 (ENSECAG00000018213) #30	PRRX2 (ENSECAG00000023890) #31	PTGES (ENSECAG00000000943) #32	TOR1B (ENSECAG00000008630) #33	TOR1A (ENSECAG00000013990) #34	C25H9orf78 (ENSECAG00000018958) #35	USP20 (ENSECAG00000008342) #36	FNBP1 (ENSECAG00000012905) #37	GPR107 (ENSECAG00000008964)
Chiroptera	ANCESTRAL SPECIES	8	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Microchiroptera	ANCESTRAL SPECIES	7	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B	ENSGT00940000162328
Greater horseshoe bat	MODERN SPECIES	3	SPTAN1 (ENSRFEG00010019570) #7	DYNC2I2 (ENSRFEG00010020990) #8	ENSRFEG00010021026	PKN3 (ENSRFEG00010021078) #10	ZDHHC12 (ENSRFEG00010021123) #11	ZER1 (ENSRFEG00010021150) #12	TBC1D13 (ENSRFEG00010021197) #13	ENDOG (ENSRFEG00010021222) #14	SPOUT1 (ENSRFEG00010021243) #15	KYAT1 (ENSRFEG00010021274) #16	LRRC8A (ENSRFEG00010021299) #17	PHYHD1 (ENSRFEG00010021320) #18	DOLK (ENSRFEG00010021371) #19	NUP188 (ENSRFEG00010021406) #20	SH3GLB2 (ENSRFEG00010021469) #21	MIGA2 (ENSRFEG00010021517) #22	DOLPP1 (ENSRFEG00010021538) #23	CRAT (ENSRFEG00010021576) #24	PTPA (ENSRFEG00010021631) #25	IER5L (ENSRFEG00010021671)	NTMT1 (ENSRFEG00010021692) #29	ASB6 (ENSRFEG00010021715) #30	PRRX2 (ENSRFEG00010021726) #31	TOR1A (ENSRFEG00010021736) #34	ENSRFEG00010021746 #33	C9orf78 (ENSRFEG00010021754) #35	USP20 (ENSRFEG00010021769) #36	FNBP1 (ENSRFEG00010021794) #37	GPR107 (ENSRFEG00010021829)	NCS1 (ENSRFEG00010021843)	HMCN2 (ENSRFEG00010021885)
Microbat	MODERN SPECIES	1399	SPTAN1 (ENSMLUG00000007420) #7	DYNC2I2 (ENSMLUG00000007516) #8	SET (ENSMLUG00000014291)	PKN3 (ENSMLUG00000014295) #10	ZDHHC12 (ENSMLUG00000014311) #11	ZER1 (ENSMLUG00000004608) #12	TBC1D13 (ENSMLUG00000014313) #13	ENDOG (ENSMLUG00000014319) #14	SPOUT1 (ENSMLUG00000014330) #15	KYAT1 (ENSMLUG00000014338) #16	LRRC8A (ENSMLUG00000011113) #17	PHYHD1 (ENSMLUG00000011117) #18	DOLK (ENSMLUG00000008768) #19	NUP188 (ENSMLUG00000011149) #20	SH3GLB2 (ENSMLUG00000011230) #21	MIGA2 (ENSMLUG00000011248) #22	DOLPP1 (ENSMLUG00000011273) #23	ENSMLUG00000011287 #24	PTPA (ENSMLUG00000011320) #25
Megabat	MODERN SPECIES	1263																MIGA2 (ENSPVAG00000002537) #22	DOLPP1 (ENSPVAG00000002538) #23	CRAT (ENSPVAG00000002539) #24	PTPA (ENSPVAG00000002541) #25	ENSPVAG00000002544
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000008565.a #22
Hedgehog	MODERN SPECIES	4466																MIGA2 (ENSEEUG00000001295) #22
Atlantogenata	ANCESTRAL SPECIES	47	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987.c #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Afrotheria	ANCESTRAL SPECIES		ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987.c #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Afrotheria_a	ANCESTRAL SPECIES		ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877.h	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987.c #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000004321 #28	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Elephant	MODERN SPECIES	472	DYNC2I2 (ENSLAFG00000018622) #8	PKN3 (ENSLAFG00000009776) #10	SET (ENSLAFG00000030310)	ZDHHC12 (ENSLAFG00000028584) #11	ZER1 (ENSLAFG00000012950) #12	TBC1D13 (ENSLAFG00000021344) #13	ENDOG (ENSLAFG00000028267) #14	SPOUT1 (ENSLAFG00000014778) #15	KYAT1 (ENSLAFG00000022510) #16	LRRC8A (ENSLAFG00000018674) #17	PHYHD1 (ENSLAFG00000031812) #18	DOLK (ENSLAFG00000027684) #19	NUP188 (ENSLAFG00000014921) #20	SH3GLB2 (ENSLAFG00000014943) #21	DOLPP1 (ENSLAFG00000012666) #23	MIGA2 (ENSLAFG00000012657) #22	CRAT (ENSLAFG00000016510) #24	PTPA (ENSLAFG00000016517) #25	IER5L (ENSLAFG00000016528)	ENSLAFG00000002341 #28	NTMT1 (ENSLAFG00000002344) #29	ASB6 (ENSLAFG00000002346) #30	PRRX2 (ENSLAFG00000002347) #31	PTGES (ENSLAFG00000015413) #32	TOR1B (ENSLAFG00000009757) #33	TOR1A (ENSLAFG00000009760) #34	C9orf78 (ENSLAFG00000009762) #35	USP20 (ENSLAFG00000009765) #36	FNBP1 (ENSLAFG00000009771) #37	GPR107 (ENSLAFG00000002123)	NCS1 (ENSLAFG00000004356)
Hyrax	MODERN SPECIES	7432																ENSPCAG00000010948 #22
Tenrec	MODERN SPECIES	4314																MIGA2 (ENSETEG00000011744) #22	DOLPP1 (ENSETEG00000011749) #23
Xenarthra	ANCESTRAL SPECIES	301							ENSGT00940000158674 #13	ENSGT00940000160987.c #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a
Armadillo	MODERN SPECIES	1996							TBC1D13 (ENSDNOG00000025500) #13	ENDOG (ENSDNOG00000031222) #14	SPOUT1 (ENSDNOG00000007388) #15	ENSDNOG00000007928 #16	LRRC8A (ENSDNOG00000042590) #17	PHYHD1 (ENSDNOG00000011832) #18	DOLK (ENSDNOG00000011846) #19	NUP188 (ENSDNOG00000011851) #20	SH3GLB2 (ENSDNOG00000035101) #21	MIGA2 (ENSDNOG00000041472) #22	DOLPP1 (ENSDNOG00000005043) #23	CRAT (ENSDNOG00000005051) #24	PTPA (ENSDNOG00000039209) #25	IER5L (ENSDNOG00000036171)
Sloth	MODERN SPECIES	3940																MIGA2 (ENSCHOG00000003191) #22
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00940000158483 #8	ENSGT00940000153877.f	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000009902.h	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787.a #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000158483 #8	ENSGT00940000153877.f	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000009902.h	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787.a #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000158483 #8	ENSGT00940000153877.f	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000009902.h	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787.a #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000158483 #8	ENSGT00940000153877.f	ENSGT00940000161818 #10	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000009902.h	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787.a #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
koala	MODERN SPECIES	161	SPTAN1 (ENSPCIG00000029892) #7	DYNC2I2 (ENSPCIG00000030096) #8	SET (ENSPCIG00000030104)	PKN3 (ENSPCIG00000030107) #10	ZER1 (ENSPCIG00000030111) #12	TBC1D13 (ENSPCIG00000030114) #13	ENDOG (ENSPCIG00000030115) #14	SPOUT1 (ENSPCIG00000030118) #15	KYAT1 (ENSPCIG00000030121) #16	LRRC8A (ENSPCIG00000008130) #17	ENSPCIG00000030128 #18	DOLK (ENSPCIG00000030139) #19	NUP188 (ENSPCIG00000030144) #20	SH3GLB2 (ENSPCIG00000030159) #21	ENSPCIG00000030173	MIGA2 (ENSPCIG00000031019) #22	DOLPP1 (ENSPCIG00000034416) #23	CRAT (ENSPCIG00000030187) #24	PTPA (ENSPCIG00000030192) #25	ENSPCIG00000033083
Common wonbat	MODERN SPECIES	1030	SPTAN1 (ENSVURG00010013542) #7	DYNC2I2 (ENSVURG00010013437) #8	SET (ENSVURG00010013422)	PKN3 (ENSVURG00010013394) #10	ZDHHC12 (ENSVURG00010013384) #11	ZER1 (ENSVURG00010013363) #12	TBC1D13 (ENSVURG00010013333) #13	ENDOG (ENSVURG00010013322) #14	SPOUT1 (ENSVURG00010013316) #15	KYAT1 (ENSVURG00010013300) #16	LRRC8A (ENSVURG00010013287) #17	PHYHD1 (ENSVURG00010013281) #18	DOLK (ENSVURG00010013275) #19	NUP188 (ENSVURG00010013249) #20	SH3GLB2 (ENSVURG00010013201) #21	MIGA2 (ENSVURG00010013177) #22	DOLPP1 (ENSVURG00010013163) #23	CRAT (ENSVURG00010013140) #24	PTPA (ENSVURG00010013082) #25	IER5L (ENSVURG00010013067)	NTMT1 (ENSVURG00010013035) #29	ASB6 (ENSVURG00010013022) #30	PRRX2 (ENSVURG00010012991) #31	ENSVURG00010012980 #32	TOR1B (ENSVURG00010012974) #33	TOR1A (ENSVURG00010012967) #34	ENSVURG00010012950 #35	USP20 (ENSVURG00010012929) #36	FNBP1 (ENSVURG00010012874) #37	GPR107 (ENSVURG00010012853)	NCS1 (ENSVURG00010012846)
Wallaby	MODERN SPECIES	5516																MIGA2 (ENSMEUG00000015190) #22
Tasmanian devil	MODERN SPECIES	1	SPTAN1 (ENSSHAG00000018784) #7	DYNC2I2 (ENSSHAG00000018803) #8	SET (ENSSHAG00000018817)	PKN3 (ENSSHAG00000018824) #10	ZDHHC12 (ENSSHAG00000024938) #11	ZER1 (ENSSHAG00000018831) #12	TBC1D13 (ENSSHAG00000029784) #13	ENDOG (ENSSHAG00000029467) #14	SPOUT1 (ENSSHAG00000018857) #15	KYAT1 (ENSSHAG00000018862) #16	LRRC8A (ENSSHAG00000018882) #17	PHYHD1 (ENSSHAG00000028077) #18	NUP188 (ENSSHAG00000024098) #20	DOLK (ENSSHAG00000018894) #19	SH3GLB2 (ENSSHAG00000018901) #21	MIGA2 (ENSSHAG00000018913) #22	DOLPP1 (ENSSHAG00000018920) #23	CRAT (ENSSHAG00000018925) #24	PTPA (ENSSHAG00000000348) #25	IER5L (ENSSHAG00000030588)	NTMT1 (ENSSHAG00000010773) #29	ASB6 (ENSSHAG00000010852) #30	PRRX2 (ENSSHAG00000026808) #31	PTGES (ENSSHAG00000021077) #32	TOR1B (ENSSHAG00000027080) #33	ENSSHAG00000012313 #34	USP20 (ENSSHAG00000012417) #36	FNBP1 (ENSSHAG00000032090) #37	GPR107 (ENSSHAG00000013610)	ENSSHAG00000029345	HMCN2 (ENSSHAG00000014551)
Opossum	MODERN SPECIES		DYNC2I2 (ENSMODG00000006276) #8	SET (ENSMODG00000006342)	ENSMODG00000049700	PKN3 (ENSMODG00000006395) #10	ZDHHC12 (ENSMODG00000006407) #11	ZER1 (ENSMODG00000006425) #12	TBC1D13 (ENSMODG00000006451) #13	ENDOG (ENSMODG00000006458) #14	SPOUT1 (ENSMODG00000006461) #15	KYAT1 (ENSMODG00000047627) #16	LRRC8A (ENSMODG00000006491) #17	DOLK (ENSMODG00000023342) #19	NUP188 (ENSMODG00000006611) #20	SH3GLB2 (ENSMODG00000006632) #21	ENSMODG00000000199	MIGA2 (ENSMODG00000006670) #22	DOLPP1 (ENSMODG00000006683) #23	CRAT (ENSMODG00000006706) #24	PTPA (ENSMODG00000006724) #25	IER5L (ENSMODG00000006731)	NTMT1 (ENSMODG00000006752) #29	ASB6 (ENSMODG00000006761) #30	PRRX2 (ENSMODG00000006772) #31	ENSMODG00000006776 #32	TOR1B (ENSMODG00000006789) #33	TOR1A (ENSMODG00000006810) #34	ENSMODG00000006832 #35	USP20 (ENSMODG00000006916) #36	FNBP1 (ENSMODG00000006998) #37	GPR107 (ENSMODG00000007041)	ENSMODG00000049281
Platypus	MODERN SPECIES	15	PKN3 (ENSOANG00000008094) #10	ENSOANG00000043658 #11	ZER1 (ENSOANG00000041420) #12	TBC1D13 (ENSOANG00000044821) #13	ENDOG (ENSOANG00000038236) #14	SPOUT1 (ENSOANG00000003336) #15	KYAT1 (ENSOANG00000003335) #16	LRRC8A (ENSOANG00000014621) #17	ENSOANG00000019923 #18	ENSOANG00000050711 #18	ENSOANG00000040329	DOLK (ENSOANG00000043436) #19	ENSOANG00000036710 #18	NUP188 (ENSOANG00000005920) #20	CRAT (ENSOANG00000048315) #24	MIGA2 (ENSOANG00000007740) #22	DOLPP1 (ENSOANG00000013511) #23	PTPA (ENSOANG00000008240) #25	IER5L (ENSOANG00000039499)	NTMT1 (ENSOANG00000038659) #29	ASB6 (ENSOANG00000048520) #30	ENSOANG00000047721 #31	PTGES (ENSOANG00000040627) #32	TOR1B (ENSOANG00000002550) #33	TOR1A (ENSOANG00000037291) #34	C9orf78 (ENSOANG00000037333) #35	USP20 (ENSOANG00000002553) #36	FNBP1 (ENSOANG00000002554) #37	GPR107 (ENSOANG00000002555)	NCS1 (ENSOANG00000001037)	ENSOANG00000001040
Sauria	ANCESTRAL SPECIES	33				ENSGT00940000177919	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000163010
Lepidosauria	ANCESTRAL SPECIES	21	ENSGT00940000156662.d.b #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Episquamata	ANCESTRAL SPECIES	15	ENSGT00940000159244	ENSGT00390000014658	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Laterata	ANCESTRAL SPECIES	46	ENSGT00940000159244	ENSGT00390000014658	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34
Common wall lizard	MODERN SPECIES	419	ENSPMRG00000021900	C9orf78 (ENSPMRG00000021909) #35	SET (ENSPMRG00000021931)	ZDHHC12 (ENSPMRG00000021947) #11	ZER1 (ENSPMRG00000021965) #12	TBC1D13 (ENSPMRG00000021980) #13	ENDOG (ENSPMRG00000022000) #14	ENSPMRG00000022004 #15	KYAT1 (ENSPMRG00000022020) #16	ENSPMRG00000022024	LRRC8A (ENSPMRG00000022029) #17	PHYHD1 (ENSPMRG00000022035) #18	DOLK (ENSPMRG00000022039) #19	NUP188 (ENSPMRG00000022141) #20	SH3GLB2 (ENSPMRG00000022512) #21	MIGA2 (ENSPMRG00000022521) #22	DOLPP1 (ENSPMRG00000022525) #23	CRAT (ENSPMRG00000022532) #24	PTPA (ENSPMRG00000022536) #25	NTMT1 (ENSPMRG00000022539) #29	ENSPMRG00000022552 #30	PTGES (ENSPMRG00000022555) #32	TOR1B (ENSPMRG00000022558) #33	TOR1A (ENSPMRG00000022562) #34	MYMK (ENSPMRG00000022566)	ADAMTSL2 (ENSPMRG00000022580)	FAM163B (ENSPMRG00000022626)	DBH (ENSPMRG00000022633)	SARDH (ENSPMRG00000022640)	VAV2 (ENSPMRG00000022666)	ENSPMRG00000022719
Argentine black and white tegu	MODERN SPECIES	129	UBAC1 (ENSSMRG00000021325)	SET (ENSSMRG00000021323)	ENSSMRG00000021322	ZDHHC12 (ENSSMRG00000021321) #11	ZER1 (ENSSMRG00000021169) #12	ENSSMRG00000021165	TBC1D13 (ENSSMRG00000021164) #13	ENDOG (ENSSMRG00000021162) #14	SPOUT1 (ENSSMRG00000021133) #15	KYAT1 (ENSSMRG00000020878) #16	LRRC8A (ENSSMRG00000020877) #17	PHYHD1 (ENSSMRG00000020876) #18	DOLK (ENSSMRG00000020875) #19	NUP188 (ENSSMRG00000019964) #20	SH3GLB2 (ENSSMRG00000019950) #21	MIGA2 (ENSSMRG00000019949) #22	PPP1R26 (ENSSMRG00000019948)	OLFM1 (ENSSMRG00000019947)	COL5A1 (ENSSMRG00000019945)
Toxicofera	ANCESTRAL SPECIES	26	ENSGT00940000159244	ENSGT00390000014658	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Elapidae	ANCESTRAL SPECIES	18	ENSGT00940000159244	ENSGT00390000014658	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500.u #25	ENSGT00390000011500.v #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829.k.b #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Elapidae_a	ANCESTRAL SPECIES	26	ENSGT00940000159244	ENSGT00390000014658	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500.u #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829.k.a #36	ENSGT00950000183047.d.b #37	ENSGT00950000183047.d.a #37	ENSGT00940000158829.k.b #36
Acanthophiinae	ANCESTRAL SPECIES	27	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00990000211901	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537.b #15	ENSGT00390000016537.a #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500.u #25	ENSGT00390000011500.v #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829.k.b #36	ENSGT00940000158829.k.a #36	ENSGT00950000183047.d.b #37
Mainland tiger snake	MODERN SPECIES	642										KYAT1 (ENSNSUG00000008062) #16	LRRC8A (ENSNSUG00000008064) #17	PHYHD1 (ENSNSUG00000008065) #18	DOLK (ENSNSUG00000008066) #19	NUP188 (ENSNSUG00000008067) #20	SH3GLB2 (ENSNSUG00000008075) #21	MIGA2 (ENSNSUG00000008136) #22	ENSNSUG00000008286	ENSNSUG00000008287
Eastern brown snake	MODERN SPECIES	54	SET (ENSPTXG00000014134)	ENSPTXG00000014137	ZDHHC12 (ENSPTXG00000014141) #11	ZER1 (ENSPTXG00000014145) #12	TBC1D13 (ENSPTXG00000014150) #13	ENSPTXG00000014156	ENDOG (ENSPTXG00000014159) #14	ENSPTXG00000014160 #15	ENSPTXG00000014162 #15	KYAT1 (ENSPTXG00000014164) #16	LRRC8A (ENSPTXG00000014166) #17	PHYHD1 (ENSPTXG00000014171) #18	DOLK (ENSPTXG00000014183) #19	NUP188 (ENSPTXG00000014184) #20	SH3GLB2 (ENSPTXG00000014200) #21	MIGA2 (ENSPTXG00000014202) #22	DOLPP1 (ENSPTXG00000014203) #23	CRAT (ENSPTXG00000014208) #24	PTPA (ENSPTXG00000014243) #25	ENSPTXG00000014245	NTMT1 (ENSPTXG00000014247) #29	ASB6 (ENSPTXG00000014249) #30	PRRX2 (ENSPTXG00000014251) #31	PTGES (ENSPTXG00000014253) #32	TOR1B (ENSPTXG00000014254) #33	TOR1A (ENSPTXG00000014256) #34	C9orf78 (ENSPTXG00000014257) #35	ENSPTXG00000014258 #36	ENSPTXG00000014260 #37	ENSPTXG00000014262 #37	GPR107 (ENSPTXG00000014263)
Blue-lipped sea krait	MODERN SPECIES	2519	NACC2 (ENSLLTG00000008884)	UBAC1 (ENSLLTG00000008848)	SET (ENSLLTG00000008830)	ENSLLTG00000007358	ZDHHC12 (ENSLLTG00000007279) #11	ZER1 (ENSLLTG00000007236) #12	TBC1D13 (ENSLLTG00000007201) #13	ENDOG (ENSLLTG00000007183) #14	SPOUT1 (ENSLLTG00000007160) #15	KYAT1 (ENSLLTG00000007118) #16	LRRC8A (ENSLLTG00000007104) #17	PHYHD1 (ENSLLTG00000007079) #18	DOLK (ENSLLTG00000007054) #19	NUP188 (ENSLLTG00000006945) #20	SH3GLB2 (ENSLLTG00000006697) #21	MIGA2 (ENSLLTG00000006538) #22	DOLPP1 (ENSLLTG00000006485) #23	CRAT (ENSLLTG00000006452) #24	PTPA (ENSLLTG00000017944) #25	ENSLLTG00000017942	NTMT1 (ENSLLTG00000017941) #29	ASB6 (ENSLLTG00000017940) #30	PRRX2 (ENSLLTG00000017939) #31	NCS1 (ENSLLTG00000017937)	ASS1 (ENSLLTG00000017933)
Indian cobra	MODERN SPECIES	8	NACC2 (ENSNNAG00000017053)	UBAC1 (ENSNNAG00000017064)	SET (ENSNNAG00000017075)	ENSNNAG00000017092	ZDHHC12 (ENSNNAG00000017153) #11	TBC1D13 (ENSNNAG00000017159) #13	ENDOG (ENSNNAG00000017168) #14	SPOUT1 (ENSNNAG00000017173) #15	KYAT1 (ENSNNAG00000017180) #16	ENSNNAG00000017185 #17	ENSNNAG00000017188 #17	PHYHD1 (ENSNNAG00000017196) #18	DOLK (ENSNNAG00000017205) #19	NUP188 (ENSNNAG00000017297) #20	SH3GLB2 (ENSNNAG00000017491) #21	MIGA2 (ENSNNAG00000017503) #22	DOLPP1 (ENSNNAG00000017511) #23	CRAT (ENSNNAG00000017524) #24	ENSNNAG00000017580 #25	ENSNNAG00000017588	NTMT1 (ENSNNAG00000017593) #29	ASB6 (ENSNNAG00000017600) #30	PRRX2 (ENSNNAG00000017604) #31	PTGES (ENSNNAG00000017607) #32	TOR1B (ENSNNAG00000017614) #33	TOR1A (ENSNNAG00000017616) #34	C9orf78 (ENSNNAG00000017621) #35	USP20 (ENSNNAG00000017645) #36	FNBP1 (ENSNNAG00000017668) #37	GPR107 (ENSNNAG00000017702)	ENSNNAG00000017719
Lizard	MODERN SPECIES	1633																ENSACAG00000017233 #22	DOLPP1 (ENSACAG00000017227) #23	CRAT (ENSACAG00000017176) #24	PTPA (ENSACAG00000011425) #25
tuatara	MODERN SPECIES	746	DYNC2I2 (ENSSPUG00000014383) #8	SET (ENSSPUG00000014327)	PKN1 (ENSSPUG00000014203)	ZDHHC12 (ENSSPUG00000014168) #11	ZER1 (ENSSPUG00000014152) #12	ENSSPUG00000014145	TBC1D13 (ENSSPUG00000014090) #13	SPOUT1 (ENSSPUG00000014052) #15	KYAT1 (ENSSPUG00000014008) #16	LRRC8A (ENSSPUG00000013994) #17	ENSSPUG00000013984	PHYHD1 (ENSSPUG00000013902) #18	DOLK (ENSSPUG00000013885) #19	NUP188 (ENSSPUG00000013847) #20	SH3GLB2 (ENSSPUG00000013828) #21	MIGA2 (ENSSPUG00000013797) #22	DOLPP1 (ENSSPUG00000013774) #23	CRAT (ENSSPUG00000013763) #24	ENSSPUG00000013747 #25	ENSSPUG00000013737 #25	NTMT1 (ENSSPUG00000013697) #29	ASB6 (ENSSPUG00000013687) #30	PRRX2 (ENSSPUG00000013682) #31	PTGES (ENSSPUG00000013674) #32	TOR1B (ENSSPUG00000013659) #33	TOR1A (ENSSPUG00000013644) #34	C9orf78 (ENSSPUG00000013636) #35	ENSSPUG00000013627 #36	ENSSPUG00000013621 #36	ENSSPUG00000013609 #36	FNBP1 (ENSSPUG00000013574) #37
Archelosauria	ANCESTRAL SPECIES	32					ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Archosauria	ANCESTRAL SPECIES	25	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Aves	ANCESTRAL SPECIES	21	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Neognathae	ANCESTRAL SPECIES	20	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Galloanserae	ANCESTRAL SPECIES	22	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Anatidae	ANCESTRAL SPECIES	13	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Pink-footed goose	MODERN SPECIES	8	SPTAN1 (ENSABRG00000011823) #7	DYNC2I2 (ENSABRG00000019062) #8	SET (ENSABRG00000019082)	PKN1 (ENSABRG00000019253)	ZDHHC12 (ENSABRG00000019986) #11	ZER1 (ENSABRG00000020000) #12	TBC1D13 (ENSABRG00000020114) #13	ENDOG (ENSABRG00000020139) #14	SPOUT1 (ENSABRG00000020142) #15	KYAT1 (ENSABRG00000020163) #16	LRRC8A (ENSABRG00000020227) #17	PHYHD1 (ENSABRG00000020228) #18	DOLK (ENSABRG00000020229) #19	NUP188 (ENSABRG00000020273) #20	SH3GLB2 (ENSABRG00000020592) #21	MIGA2 (ENSABRG00000020634) #22	DOLPP1 (ENSABRG00000020672) #23	CRAT (ENSABRG00000020706) #24	PTPA (ENSABRG00000020753) #25	ENSABRG00000020756	NTMT1 (ENSABRG00000020763) #29	ASB6 (ENSABRG00000020765) #30	PRRX2 (ENSABRG00000020766) #31	PTGES (ENSABRG00000020771) #32	ENSABRG00000020775 ##34	TOR1B (ENSABRG00000020777) #33	C9orf78 (ENSABRG00000020779) #35	USP20 (ENSABRG00000020788) #36	FNBP1 (ENSABRG00000020798) #37	GPR107 (ENSABRG00000020811)	NCS1 (ENSABRG00000020814)
Duck	MODERN SPECIES	8	GLE1 (ENSAPLG00000016355)	SPTAN1 (ENSAPLG00000014718) #7	DYNC2I2 (ENSAPLG00000014296) #8	SET (ENSAPLG00000013781)	ENSAPLG00000013093	ZDHHC12 (ENSAPLG00000012997) #11	ZER1 (ENSAPLG00000012789) #12	TBC1D13 (ENSAPLG00000004702) #13	ENDOG (ENSAPLG00000004952) #14	SPOUT1 (ENSAPLG00000005094) #15	KYAT1 (ENSAPLG00000005215) #16	LRRC8A (ENSAPLG00000005396) #17	PHYHD1 (ENSAPLG00000028351) #18	NUP188 (ENSAPLG00000005569) #20	SH3GLB2 (ENSAPLG00000006680) #21	MIGA2 (ENSAPLG00000006834) #22	ENSAPLG00000026375	ENSAPLG00000007140	CRAT (ENSAPLG00000007161) #24	PTPA (ENSAPLG00000007782) #25	NTMT1 (ENSAPLG00000008022) #29	ASB6 (ENSAPLG00000029087) #30	PTGES (ENSAPLG00000008242) #32	ENSAPLG00000021783 ##34	TOR1B (ENSAPLG00000018970) #33	C9orf78 (ENSAPLG00000008571) #35	USP20 (ENSAPLG00000008760) #36	FNBP1 (ENSAPLG00000009326) #37	GPR107 (ENSAPLG00000009595)	ENSAPLG00000023157	ENSAPLG00000029670
Phasianidae	ANCESTRAL SPECIES	20	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Phasianidae_b	ANCESTRAL SPECIES	19	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Chicken	MODERN SPECIES	8	SPTAN1 (ENSGALG00010028556) #7	WDR34 (ENSGALG00010028559) #8	SET (ENSGALG00010028561)	PKN3 (ENSGALG00010028565)	ZDHHC12 (ENSGALG00010028566) #11	ZER1 (ENSGALG00010028569) #12	TBC1D13 (ENSGALG00010028572) #13	ENDOG (ENSGALG00010028574) #14	SPOUT1 (ENSGALG00010028578) #15	KYAT1 (ENSGALG00010028582) #16	LRRC8A (ENSGALG00010028584) #17	PHYHD1 (ENSGALG00010028589) #18	DOLK (ENSGALG00010028593) #19	NUP188 (ENSGALG00010028597) #20	SH3GLB2 (ENSGALG00010028603) #21	MIGA2 (ENSGALG00010028608) #22	DOLPP1 (ENSGALG00010028618) #23	CRAT (ENSGALG00010028626) #24	PTPA (ENSGALG00010028658) #25	IER5L (ENSGALG00010028005)	NTMT1 (ENSGALG00010028008) #29	ASB6 (ENSGALG00010028010) #30	PRRX2 (ENSGALG00010028012) #31	PTGES (ENSGALG00010028488) #32	ENSGALG00010028489 ##34	TOR1B (ENSGALG00010028491) #33	TOR1A (ENSGALG00010028493) #34	C17H9orf78 (ENSGALG00010028498) #35	USP20 (ENSGALG00010028501) #36	FNBP1 (ENSGALG00010028514) #37	GPR107 (ENSGALG00010028536)
Turkey	MODERN SPECIES	10	GLE1 (ENSMGAG00000004391)	DYNC2I2 (ENSMGAG00000004399) #8	SET (ENSMGAG00000004425)	ENSMGAG00000004448	ZDHHC12 (ENSMGAG00000004548) #11	ZER1 (ENSMGAG00000004629) #12	TBC1D13 (ENSMGAG00000004524) #13	ENDOG (ENSMGAG00000004558) #14	SPOUT1 (ENSMGAG00000004568) #15	KYAT1 (ENSMGAG00000004594) #16	LRRC8A (ENSMGAG00000004668) #17	PHYHD1 (ENSMGAG00000004680) #18	DOLK (ENSMGAG00000015779) #19	NUP188 (ENSMGAG00000004695) #20	SH3GLB2 (ENSMGAG00000004815) #21	MIGA2 (ENSMGAG00000004844) #22	DOLPP1 (ENSMGAG00000004883) #23	CRAT (ENSMGAG00000004898) #24	PTPA (ENSMGAG00000004950) #25	NTMT1 (ENSMGAG00000004980) #29	ASB6 (ENSMGAG00000005026) #30	PRRX2 (ENSMGAG00000005003) #31	PTGES (ENSMGAG00000017961) #32	ENSMGAG00000018656 ##34	TOR1B (ENSMGAG00000005072) #33	TOR1A (ENSMGAG00000005102) #34	C9orf78 (ENSMGAG00000005128) #35	USP20 (ENSMGAG00000005153) #36	FNBP1 (ENSMGAG00000005202) #37	GPR107 (ENSMGAG00000005222)	ENSMGAG00000005292
Japanese quail	MODERN SPECIES	8	SPTAN1 (ENSCJPG00005020100) #7	DYNC2I2 (ENSCJPG00005020185) #8	SET (ENSCJPG00005020186)	ENSCJPG00005020187	ZDHHC12 (ENSCJPG00005020302) #11	ZER1 (ENSCJPG00005020303) #12	TBC1D13 (ENSCJPG00005020304) #13	ENDOG (ENSCJPG00005020305) #14	SPOUT1 (ENSCJPG00005020306) #15	KYAT1 (ENSCJPG00005020307) #16	LRRC8A (ENSCJPG00005020308) #17	PHYHD1 (ENSCJPG00005020309) #18	DOLK (ENSCJPG00005020310) #19	NUP188 (ENSCJPG00005020311) #20	SH3GLB2 (ENSCJPG00005020363) #21	MIGA2 (ENSCJPG00005020364) #22	ENSCJPG00005020366	ENSCJPG00005020367	CRAT (ENSCJPG00005020368) #24	PTPA (ENSCJPG00005020370) #25	NTMT1 (ENSCJPG00005020375) #29	ASB6 (ENSCJPG00005020376) #30	ENSCJPG00005020377	PRRX2 (ENSCJPG00005020378) #31	PTGES (ENSCJPG00005020379) #32	ENSCJPG00005020380 ##34	TOR1B (ENSCJPG00005020381) #33	TOR1A (ENSCJPG00005020382) #34	C9orf78 (ENSCJPG00005020383) #35	USP20 (ENSCJPG00005020384) #36	FNBP1 (ENSCJPG00005020409) #37
Neognathae_b	ANCESTRAL SPECIES	21	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Neognathae_c	ANCESTRAL SPECIES	25	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Golden eagle	MODERN SPECIES	16	DYNC2I2 (ENSACCG00020011996) #8	SET (ENSACCG00020012052)	ENSACCG00020012086	ZDHHC12 (ENSACCG00020012116) #11	ZER1 (ENSACCG00020012155) #12	TBC1D13 (ENSACCG00020012196) #13	ENDOG (ENSACCG00020012216) #14	SPOUT1 (ENSACCG00020012243) #15	KYAT1 (ENSACCG00020012286) #16	LRRC8A (ENSACCG00020012328) #17	PHYHD1 (ENSACCG00020012351) #18	DOLK (ENSACCG00020012372) #19	ENSACCG00020012391 #20	NUP188 (ENSACCG00020012426) #20	SH3GLB2 (ENSACCG00020012549) #21	MIGA2 (ENSACCG00020012627) #22	DOLPP1 (ENSACCG00020012663) #23	CRAT (ENSACCG00020012704) #24	PTPA (ENSACCG00020012749) #25	ENSACCG00020012771	NTMT1 (ENSACCG00020012782) #29	ASB6 (ENSACCG00020012806) #30	PRRX2 (ENSACCG00020012829) #31	PTGES (ENSACCG00020012851) #32	ENSACCG00020012865 ##34	TOR1B (ENSACCG00020012883) #33	TOR1A (ENSACCG00020012903) #34	C9orf78 (ENSACCG00020012921) #35	USP20 (ENSACCG00020012961) #36	FNBP1 (ENSACCG00020013087) #37	GPR107 (ENSACCG00020013158)
Kakapo	MODERN SPECIES	9	SPTAN1 (ENSSHBG00005016133) #7	DYNC2I2 (ENSSHBG00005016116) #8	SET (ENSSHBG00005016110)	ENSSHBG00005012668	ZDHHC12 (ENSSHBG00005012414) #11	ZER1 (ENSSHBG00005012394) #12	TBC1D13 (ENSSHBG00005012377) #13	ENDOG (ENSSHBG00005012358) #14	SPOUT1 (ENSSHBG00005012342) #15	KYAT1 (ENSSHBG00005012305) #16	LRRC8A (ENSSHBG00005012289) #17	PHYHD1 (ENSSHBG00005012261) #18	DOLK (ENSSHBG00005012238) #19	NUP188 (ENSSHBG00005012197) #20	SH3GLB2 (ENSSHBG00005012050) #21	MIGA2 (ENSSHBG00005011995) #22	DOLPP1 (ENSSHBG00005011975) #23	CRAT (ENSSHBG00005011945) #24	PTPA (ENSSHBG00005011924) #25	IER5L (ENSSHBG00005011915)	NTMT1 (ENSSHBG00005011896) #29	ASB6 (ENSSHBG00005011877) #30	PRRX2 (ENSSHBG00005011856) #31	PTGES (ENSSHBG00005011832) #32	TOR1B (ENSSHBG00005011821) #33	TOR1A (ENSSHBG00005011800) #34	C9orf78 (ENSSHBG00005011777) #35	USP20 (ENSSHBG00005011734) #36	FNBP1 (ENSSHBG00005011684) #37	GPR107 (ENSSHBG00005011641)	NCS1 (ENSSHBG00005011616)
Passeriformes	ANCESTRAL SPECIES	20	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000163010
Passeriformes_d	ANCESTRAL SPECIES	20	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000163010
Passeriformes_g	ANCESTRAL SPECIES	21	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000163010
Passeroidea	ANCESTRAL SPECIES	21	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000163010
Common canary	MODERN SPECIES	22	SPTAN1 (ENSSCAG00000005345) #7	DYNC2I2 (ENSSCAG00000005158) #8	SET (ENSSCAG00000005153)	ENSSCAG00000005143	ZDHHC12 (ENSSCAG00000005137) #11	ZER1 (ENSSCAG00000005129) #12	TBC1D13 (ENSSCAG00000005124) #13	ENDOG (ENSSCAG00000005120) #14	SPOUT1 (ENSSCAG00000005117) #15	KYAT1 (ENSSCAG00000005111) #16	LRRC8A (ENSSCAG00000005107) #17	PHYHD1 (ENSSCAG00000005104) #18	DOLK (ENSSCAG00000005101) #19	NUP188 (ENSSCAG00000005083) #20	SH3GLB2 (ENSSCAG00000005069) #21	MIGA2 (ENSSCAG00000005060) #22	ENSSCAG00000005055	DOLPP1 (ENSSCAG00000005034) #23	CRAT (ENSSCAG00000005022) #24	PTPA (ENSSCAG00000005005) #25	NTMT1 (ENSSCAG00000004995) #29	ASB6 (ENSSCAG00000004989) #30	PRRX2 (ENSSCAG00000004986) #31	PTGES (ENSSCAG00000004981) #32	TOR1B (ENSSCAG00000004972) #33	TOR1A (ENSSCAG00000004965) #34	C9orf78 (ENSSCAG00000004957) #35	USP20 (ENSSCAG00000004943) #36	FNBP1 (ENSSCAG00000004913) #37	GPR107 (ENSSCAG00000004896)	ENSSCAG00000004893
Zebra finch	MODERN SPECIES	8	SPTAN1 (ENSTGUG00000003937) #7	DYNC2I2 (ENSTGUG00000004041) #8	SET (ENSTGUG00000004063)	PKN1 (ENSTGUG00000004079)	ZDHHC12 (ENSTGUG00000019700) #11	ZER1 (ENSTGUG00000004153) #12	TBC1D13 (ENSTGUG00000004176) #13	ENDOG (ENSTGUG00000004197) #14	SPOUT1 (ENSTGUG00000004201) #15	KYAT1 (ENSTGUG00000004212) #16	LRRC8A (ENSTGUG00000004233) #17	PHYHD1 (ENSTGUG00000004236) #18	DOLK (ENSTGUG00000004256) #19	NUP188 (ENSTGUG00000004258) #20	SH3GLB2 (ENSTGUG00000004316) #21	MIGA2 (ENSTGUG00000004339) #22	DOLPP1 (ENSTGUG00000004356) #23	CRAT (ENSTGUG00000004362) #24	PTPA (ENSTGUG00000025205) #25	IER5L (ENSTGUG00000004425)	NTMT1 (ENSTGUG00000004430) #29	ASB6 (ENSTGUG00000004412) #30	PRRX2 (ENSTGUG00000027949) #31	PTGES (ENSTGUG00000028287) #32	TOR1B (ENSTGUG00000004451) #33	TOR1A (ENSTGUG00000004463) #34	USP20 (ENSTGUG00000004503) #36	C9orf78 (ENSTGUG00000004486) #35	FNBP1 (ENSTGUG00000004545) #37	GPR107 (ENSTGUG00000004567)	ENSTGUG00000022805
Medium ground finch	MODERN SPECIES	32	DYNC2I2 (ENSGFOG00000000266) #8	SET (ENSGFOG00000000081)	ENSGFOG00000011070	ZDHHC12 (ENSGFOG00000011048) #11	ZER1 (ENSGFOG00000011036) #12	TBC1D13 (ENSGFOG00000011027) #13	ENDOG (ENSGFOG00000011016) #14	SPOUT1 (ENSGFOG00000011003) #15	KYAT1 (ENSGFOG00000010993) #16	LRRC8A (ENSGFOG00000010987) #17	PHYHD1 (ENSGFOG00000010973) #18	DOLK (ENSGFOG00000010962) #19	ENSGFOG00000010960 #20	NUP188 (ENSGFOG00000010936) #20	SH3GLB2 (ENSGFOG00000010898) #21	MIGA2 (ENSGFOG00000010865) #22	DOLPP1 (ENSGFOG00000010849) #23	CRAT (ENSGFOG00000010821) #24	PTPA (ENSGFOG00000010805) #25	ENSGFOG00000010794 #29	ENSGFOG00000010785 #29	ASB6 (ENSGFOG00000010774) #30	PRRX2 (ENSGFOG00000010767) #31	PTGES (ENSGFOG00000010758) #32	TOR1B (ENSGFOG00000010752) #33	TOR1A (ENSGFOG00000010745) #34	C9orf78 (ENSGFOG00000010738) #35	USP20 (ENSGFOG00000010723) #36	FNBP1 (ENSGFOG00000010678) #37	GPR107 (ENSGFOG00000010651)	ENSGFOG00000010643
Flycatcher	MODERN SPECIES	7	DYNC2I2 (ENSFALG00000001411) #8	SET (ENSFALG00000026406)	ENSFALG00000001414	ZDHHC12 (ENSFALG00000001415) #11	ZER1 (ENSFALG00000001417) #12	TBC1D13 (ENSFALG00000001419) #13	ENDOG (ENSFALG00000001421) #14	SPOUT1 (ENSFALG00000028767) #15	KYAT1 (ENSFALG00000001422) #16	LRRC8A (ENSFALG00000001423) #17	PHYHD1 (ENSFALG00000001424) #18	DOLK (ENSFALG00000015268) #19	ENSFALG00000024290 #20	NUP188 (ENSFALG00000001425) #20	SH3GLB2 (ENSFALG00000001426) #21	MIGA2 (ENSFALG00000001427) #22	DOLPP1 (ENSFALG00000001428) #23	CRAT (ENSFALG00000001429) #24	PTPA (ENSFALG00000001430) #25	ENSFALG00000027410	ASB6 (ENSFALG00000001431) #30	NTMT1 (ENSFALG00000001432) #29	PRRX2 (ENSFALG00000001433) #31	PTGES (ENSFALG00000001434) #32	TOR1B (ENSFALG00000001435) #33	TOR1A (ENSFALG00000028829) #34	C9orf78 (ENSFALG00000001437) #35	USP20 (ENSFALG00000001438) #36	FNBP1 (ENSFALG00000001439) #37	GPR107 (ENSFALG00000001440)	ENSFALG00000026470
Great tit	MODERN SPECIES	7	SPTAN1 (ENSPMJG00000009478) #7	DYNC2I2 (ENSPMJG00000009476) #8	SET (ENSPMJG00000009474)	ENSPMJG00000009473	ZDHHC12 (ENSPMJG00000009472) #11	ZER1 (ENSPMJG00000009471) #12	TBC1D13 (ENSPMJG00000009470) #13	ENDOG (ENSPMJG00000009468) #14	SPOUT1 (ENSPMJG00000009467) #15	KYAT1 (ENSPMJG00000009466) #16	LRRC8A (ENSPMJG00000009465) #17	PHYHD1 (ENSPMJG00000009464) #18	DOLK (ENSPMJG00000009463) #19	NUP188 (ENSPMJG00000007061) #20	SH3GLB2 (ENSPMJG00000006954) #21	MIGA2 (ENSPMJG00000006950) #22	DOLPP1 (ENSPMJG00000006949) #23	CRAT (ENSPMJG00000006947) #24	PTPA (ENSPMJG00000006946) #25	NTMT1 (ENSPMJG00000006942) #29	ASB6 (ENSPMJG00000006940) #30	PRRX2 (ENSPMJG00000006939) #31	PTGES (ENSPMJG00000006938) #32	TOR1B (ENSPMJG00000006937) #33	TOR1A (ENSPMJG00000006936) #34	C9orf78 (ENSPMJG00000006935) #35	USP20 (ENSPMJG00000006933) #36	FNBP1 (ENSPMJG00000006925) #37	GPR107 (ENSPMJG00000006920)	ENSPMJG00000006913	ASS1 (ENSPMJG00000006879)
African ostrich	MODERN SPECIES	971	SPTAN1 (ENSSCUG00000017472) #7	DYNC2I2 (ENSSCUG00000017765) #8	SET (ENSSCUG00000017772)	PKN1 (ENSSCUG00000017776)	ZDHHC12 (ENSSCUG00000017778) #11	ZER1 (ENSSCUG00000017779) #12	TBC1D13 (ENSSCUG00000017781) #13	SPOUT1 (ENSSCUG00000017782) #15	KYAT1 (ENSSCUG00000017783) #16	LRRC8A (ENSSCUG00000017784) #17	PHYHD1 (ENSSCUG00000017786) #18	DOLK (ENSSCUG00000017789) #19	NUP188 (ENSSCUG00000017791) #20	SH3GLB2 (ENSSCUG00000017793) #21	ENSSCUG00000017795 #21	MIGA2 (ENSSCUG00000017797) #22	ENSSCUG00000017801	DOLPP1 (ENSSCUG00000017804) #23	CRAT (ENSSCUG00000017807) #24	PTPA (ENSSCUG00000017811) #25	NTMT1 (ENSSCUG00000017816) #29	ASB6 (ENSSCUG00000017819) #30
Australian saltwater crocodile	MODERN SPECIES	44	SPTAN1 (ENSCPRG00005001460) #7	DYNC2I2 (ENSCPRG00005002223) #8	SET (ENSCPRG00005002238)	PKN1 (ENSCPRG00005002282)	ZDHHC12 (ENSCPRG00005002358) #11	ZER1 (ENSCPRG00005002383) #12	TBC1D13 (ENSCPRG00005002492) #13	ENDOG (ENSCPRG00005002497) #14	SPOUT1 (ENSCPRG00005002500) #15	ENSCPRG00005002509 #16	LRRC8A (ENSCPRG00005002523) #17	PHYHD1 (ENSCPRG00005002530) #18	DOLK (ENSCPRG00005002539) #19	NUP188 (ENSCPRG00005002660) #20	SH3GLB2 (ENSCPRG00005003502) #21	MIGA2 (ENSCPRG00005003544) #22	DOLPP1 (ENSCPRG00005003644) #23	CRAT (ENSCPRG00005003698) #24	PTPA (ENSCPRG00005003805) #25	NTMT1 (ENSCPRG00005003831) #29	ASB6 (ENSCPRG00005003836) #30	PRRX2 (ENSCPRG00005003841) #31	PTGES (ENSCPRG00005003844) #32	ENSCPRG00005003849 ##34	TOR1B (ENSCPRG00005003853) #33	ENSCPRG00005003861 #34	ENSCPRG00005003866 #34	C9orf78 (ENSCPRG00005003869) #35	USP20 (ENSCPRG00005003875) #36	FNBP1 (ENSCPRG00005003896) #37	GPR107 (ENSCPRG00005003958)
Cryptodira	ANCESTRAL SPECIES	33					ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Chinese turtle	DUPLICATION
Chinese turtle	MODERN SPECIES	1463																ENSPSIG00000017860 #22	DOLPP1 (ENSPSIG00000017864) #23	CRAT (ENSPSIG00000017886) #24	PTPA (ENSPSIG00000005416) #25	NTMT1 (ENSPSIG00000005495) #29	ASB6 (ENSPSIG00000005511) #30	PRRX2 (ENSPSIG00000005594) #31	PTGES (ENSPSIG00000005605) #32	ENSPSIG00000005620 ##34	TOR1B (ENSPSIG00000005624) #33	TOR1A (ENSPSIG00000005705) #34	C9orf78 (ENSPSIG00000005885) #35	USP20 (ENSPSIG00000005924) #36	FNBP1 (ENSPSIG00000005955) #37	NCS1 (ENSPSIG00000006499)	ENSPSIG00000006548
Chinese turtle	MODERN SPECIES	764	SPTAN1 (ENSPSIG00000017684) #7	DYNC2I2 (ENSPSIG00000018054) #8	SET (ENSPSIG00000018056)	ENSPSIG00000018074	ZDHHC12 (ENSPSIG00000018085) #11	ZER1 (ENSPSIG00000018118) #12	TBC1D13 (ENSPSIG00000018124) #13	ENDOG (ENSPSIG00000018149) #14	SPOUT1 (ENSPSIG00000018152) #15	KYAT1 (ENSPSIG00000018153) #16	LRRC8A (ENSPSIG00000000011) #17	PHYHD1 (ENSPSIG00000018156) #18	DOLK (ENSPSIG00000000012) #19	NUP188 (ENSPSIG00000018163) #20	SH3GLB2 (ENSPSIG00000018168) #21	ENSPSIG00000018182 #22	SSTR2 (ENSPSIG00000000013)	COG1 (ENSPSIG00000018184)	FAM104B (ENSPSIG00000018194)	C17orf80 (ENSPSIG00000018196)	ENSPSIG00000018198	CDC42EP4 (ENSPSIG00000003678)
Testudinoidea	ANCESTRAL SPECIES	23	ENSGT00940000153877	ENSGT00940000160578	ENSGT00940000154912	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Emydidae	ANCESTRAL SPECIES	29	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154912	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Three-toed box turtle	MODERN SPECIES	113	DYNC2I2 (ENSTMTG00000022095) #8	SET (ENSTMTG00000022109)	ENSTMTG00000022132	ZDHHC12 (ENSTMTG00000022146) #11	ZER1 (ENSTMTG00000022153) #12	TBC1D13 (ENSTMTG00000022165) #13	ENDOG (ENSTMTG00000022174) #14	SPOUT1 (ENSTMTG00000022180) #15	KYAT1 (ENSTMTG00000022188) #16	LRRC8A (ENSTMTG00000022195) #17	PHYHD1 (ENSTMTG00000022202) #18	DOLK (ENSTMTG00000022214) #19	ENSTMTG00000022221 #20	NUP188 (ENSTMTG00000022232) #20	SH3GLB2 (ENSTMTG00000022242) #21	MIGA2 (ENSTMTG00000022244) #22	DOLPP1 (ENSTMTG00000022251) #23	CRAT (ENSTMTG00000022256) #24	PTPA (ENSTMTG00000022260) #25	IER5L (ENSTMTG00000022262)	NTMT1 (ENSTMTG00000022264) #29	ASB6 (ENSTMTG00000022266) #30	PRRX2 (ENSTMTG00000015809) #31	PTGES (ENSTMTG00000015812) #32	ENSTMTG00000015831 ##34	TOR1B (ENSTMTG00000015900) #33	TOR1A (ENSTMTG00000015923) #34	C9orf78 (ENSTMTG00000015930) #35	USP20 (ENSTMTG00000016119) #36	FNBP1 (ENSTMTG00000018039) #37	ENSTMTG00000018240
painted turtle	MODERN SPECIES	716	DYNC2I2 (ENSCPBG00000023373) #8	SET (ENSCPBG00000023372)	ENSCPBG00000023369	ENSCPBG00000023366	ZDHHC12 (ENSCPBG00000023365) #11	ZER1 (ENSCPBG00000023362) #12	TBC1D13 (ENSCPBG00000023355) #13	ENDOG (ENSCPBG00000023353) #14	SPOUT1 (ENSCPBG00000023348) #15	KYAT1 (ENSCPBG00000023339) #16	LRRC8A (ENSCPBG00000023338) #17	PHYHD1 (ENSCPBG00000023333) #18	DOLK (ENSCPBG00000023330) #19	NUP188 (ENSCPBG00000022859) #20	SH3GLB2 (ENSCPBG00000022792) #21	MIGA2 (ENSCPBG00000022784) #22	DOLPP1 (ENSCPBG00000022775) #23	CRAT (ENSCPBG00000022764) #24	PTPA (ENSCPBG00000022756) #25	ENSCPBG00000022752	NTMT1 (ENSCPBG00000022748) #29	ASB6 (ENSCPBG00000022744) #30	PRRX2 (ENSCPBG00000022740) #31	PTGES (ENSCPBG00000022736) #32	ENSCPBG00000022732 ##34	TOR1B (ENSCPBG00000022731) #33	TOR1A (ENSCPBG00000022729) #34	C9orf78 (ENSCPBG00000022726) #35	USP20 (ENSCPBG00000022718) #36	FNBP1 (ENSCPBG00000022705) #37	ENSCPBG00000022697
Testudinidae	ANCESTRAL SPECIES	29	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.i ##34	ENSGT00950000182888.a.a.a.j.a #33	ENSGT00950000182888.a.a.a.j.b #34	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451
Goode s thornscrub tortoise	MODERN SPECIES	7	GLE1 (ENSGEVG00005019713)	SPTAN1 (ENSGEVG00005020346) #7	DYNC2I2 (ENSGEVG00005021064) #8	SET (ENSGEVG00005021077)	ENSGEVG00005021080	ZDHHC12 (ENSGEVG00005021087) #11	ZER1 (ENSGEVG00005021100) #12	TBC1D13 (ENSGEVG00005021107) #13	SPOUT1 (ENSGEVG00005021111) #15	KYAT1 (ENSGEVG00005021117) #16	LRRC8A (ENSGEVG00005021129) #17	PHYHD1 (ENSGEVG00005021134) #18	DOLK (ENSGEVG00005021140) #19	NUP188 (ENSGEVG00005021150) #20	SH3GLB2 (ENSGEVG00005021173) #21	MIGA2 (ENSGEVG00005021178) #22	DOLPP1 (ENSGEVG00005021185) #23	CRAT (ENSGEVG00005021191) #24	PTPA (ENSGEVG00005021201) #25	ENSGEVG00005021208	NTMT1 (ENSGEVG00005021211) #29	ASB6 (ENSGEVG00005021215) #30	PRRX2 (ENSGEVG00005021218) #31	PTGES (ENSGEVG00005021221) #32	ENSGEVG00005021223 ##34	TOR1B (ENSGEVG00005021224) #33	TOR1A (ENSGEVG00005021226) #34	C9orf78 (ENSGEVG00005021227) #35	USP20 (ENSGEVG00005021231) #36	FNBP1 (ENSGEVG00005021238) #37	GPR107 (ENSGEVG00005021241)
Abingdon island giant tortoise	MODERN SPECIES	2008	SPTAN1 (ENSCABG00000002222) #7	DYNC2I2 (ENSCABG00000002237) #8	SET (ENSCABG00000002240)	ENSCABG00000002242	ZDHHC12 (ENSCABG00000002244) #11	ZER1 (ENSCABG00000002245) #12	TBC1D13 (ENSCABG00000002259) #13	ENDOG (ENSCABG00000002486) #14	SPOUT1 (ENSCABG00000002494) #15	KYAT1 (ENSCABG00000002511) #16	LRRC8A (ENSCABG00000002623) #17	PHYHD1 (ENSCABG00000002626) #18	DOLK (ENSCABG00000002676) #19	NUP188 (ENSCABG00000002715) #20	SH3GLB2 (ENSCABG00000004650) #21	MIGA2 (ENSCABG00000004654) #22	DOLPP1 (ENSCABG00000004694) #23	CRAT (ENSCABG00000004696) #24	PTPA (ENSCABG00000004699) #25	IER5L (ENSCABG00000004700)	NTMT1 (ENSCABG00000004701) #29	ASB6 (ENSCABG00000004702) #30	PRRX2 (ENSCABG00000004708) #31	PTGES (ENSCABG00000004709) #32	ENSCABG00000004711 ##34	TOR1B (ENSCABG00000004714) #33	TOR1A (ENSCABG00000004716) #34	C9orf78 (ENSCABG00000004719) #35	USP20 (ENSCABG00000004721) #36	FNBP1 (ENSCABG00000004726) #37	ENSCABG00000004729
Anura	ANCESTRAL SPECIES	38	ENSGT00940000156662.d #7	ENSGT00940000158483 #8	ENSGT00940000153877	ENSGT00940000154990.d	ENSGT00940000156902 #11	ENSGT00530000063187.A #12	ENSGT00940000158674 #13	ENSGT00940000160987 #14	ENSGT00390000016537 #15	ENSGT00940000158797 #16	ENSGT00940000154043.A.h #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841 #21	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT01060000248556.A.a.a.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a	ENSGT00390000008371.b #29	ENSGT00390000006784 #30	ENSGT00940000159466.m	ENSGT00390000011980.b.b #32	ENSGT00950000182888.a.a.a.j.a.k #33	ENSGT00950000182888.a.a.a.j.a.l #33	ENSGT00390000009787 #35	ENSGT00940000158829 #36	ENSGT00950000183047.d #37	ENSGT00940000160451	ENSGT00940000154645.B
Frog	MODERN SPECIES	8	ENSXETG00000036284	ENSXETG00000039972	ENSXETG00000048651	ENSXETG00000040308	ENSXETG00000044289	ENSXETG00000046354	ENSXETG00000041302	ENSXETG00000045353	ENSXETG00000045334	ENSXETG00000043885	ENSXETG00000048769	ENSXETG00000044216	ENSXETG00000035944	ENSXETG00000041972	ENSXETG00000046459	miga2 (ENSXETG00000018962) #22	ENSXETG00000042122	dolpp1 (ENSXETG00000018964) #23	ENSXETG00000046957	crata (ENSXETG00000018965) #24	ptpa (ENSXETG00000018970) #25	ier5l (ENSXETG00000014109)	ENSXETG00000044084	ENSXETG00000047012	ENSXETG00000043209	ENSXETG00000043709	ntmt1 (ENSXETG00000014162) #29	ENSXETG00000041703	asb6 (ENSXETG00000014166) #30	prrx2 (ENSXETG00000014169)	ptges (ENSXETG00000014173) #32
Leishan spiny toad	MODERN SPECIES	12	DYNC2I2 (ENSLLEG00000027505) #8	SET (ENSLLEG00000027817)	ENSLLEG00000028035	ZDHHC12 (ENSLLEG00000028511) #11	ZER1 (ENSLLEG00000028562) #12	TBC1D13 (ENSLLEG00000028812) #13	ENDOG (ENSLLEG00000028950) #14	SPOUT1 (ENSLLEG00000028985) #15	KYAT1 (ENSLLEG00000029041) #16	LRRC8A (ENSLLEG00000029088) #17	ENSLLEG00000029100 #17	PHYHD1 (ENSLLEG00000029123) #18	DOLK (ENSLLEG00000029211) #19	NUP188 (ENSLLEG00000029238) #20	SH3GLB2 (ENSLLEG00000029441) #21	MIGA2 (ENSLLEG00000030061) #22	DOLPP1 (ENSLLEG00000030099) #23	CRAT (ENSLLEG00000030154) #24	PTPA (ENSLLEG00000030305) #25	IER5L (ENSLLEG00000030331)	ENSLLEG00000030335	ENSLLEG00000030342	NTMT1 (ENSLLEG00000030346) #29	ASB6 (ENSLLEG00000030359) #30	ENSLLEG00000030410	PTGES (ENSLLEG00000030420) #32	ENSLLEG00000030429 ##34	TOR1B (ENSLLEG00000030445) #33	ENSLLEG00000016844	ENSLLEG00000016919 #33	ENSLLEG00000017046 #33
Coelacanth	MODERN SPECIES	338	DYNC2I2 (ENSLACG00000014551) #8	SET (ENSLACG00000014738)	si:ch211-51h9.7 (ENSLACG00000014842)	ENSLACG00000014875	ZDHHC12 (ENSLACG00000015022) #11	ENSLACG00000015090	ZER1 (ENSLACG00000015169) #12	TBC1D13 (ENSLACG00000015372) #13	ENDOG (ENSLACG00000015490) #14	SPOUT1 (ENSLACG00000015521) #15	KYAT1 (ENSLACG00000015602) #16	LRRC8A (ENSLACG00000015799) #17	PHYHD1 (ENSLACG00000015929) #18	DOLK (ENSLACG00000016014) #19	SH3GLB2 (ENSLACG00000016270) #21	MIGA2 (ENSLACG00000016463) #22	TOR2A (ENSLACG00000016669) ##34	ENSLACG00000016704	PTRH1 (ENSLACG00000016741)	CFAP157 (ENSLACG00000016756)	CERCAM (ENSLACG00000016803)	URM1 (ENSLACG00000016968)	SLC27A4 (ENSLACG00000017070)	golga2 (ENSLACG00000017171)	DNM1 (ENSLACG00000017341)	PRDM12 (ENSLACG00000017560)	FUBP3 (ENSLACG00000017619)	ASS1 (ENSLACG00000017784)
Actinopterygii	ANCESTRAL SPECIES	193	ENSGT00940000164999	ENSGT00940000159362	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00390000009787 #35	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160987 #14	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00940000156235.d
Neopterygii	ANCESTRAL SPECIES	125	ENSGT00940000160616	ENSGT00940000157955.d.a	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00390000009787 #35	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160987 #14	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a	ENSGT00940000156235.d
Osteoglossocephalai	ANCESTRAL SPECIES	23	ENSGT00940000160616	ENSGT00940000157955.d.a	ENSGT00940000155945.j	ENSGT00940000161643 #31	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00390000009787 #35	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b	ENSGT00940000156235.d	ENSGT00940000153601.a.a.f	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT01060000248544.b	ENSGT00940000155841 #21	ENSGT00940000158633.a
Clupeocephala	ANCESTRAL SPECIES	156	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00390000009787 #35	ENSGT00390000004339	ENSGT00940000153294	ENSGT00990000204427	ENSGT00940000155193	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00940000155841.c.b #21	ENSGT00940000158633.a	ENSGT00390000001098	ENSGT00940000156811.b	ENSGT00450000040324.b
Euteleosteomorpha	ANCESTRAL SPECIES	15	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00390000009787 #35	ENSGT00390000004339	ENSGT00940000153294	ENSGT00990000204427	ENSGT00940000155193	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00940000155841.c.b #21	ENSGT00940000158633.a	ENSGT00390000001098	ENSGT00940000156811.b	ENSGT00450000040324.b
Acanthomorphata	ANCESTRAL SPECIES	15	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00940000155193	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Euacanthomorphacea	ANCESTRAL SPECIES	12	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00940000155193	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Percomorphaceae	ANCESTRAL SPECIES	16	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00940000155193	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000167622	ENSGT00940000163466.g.a	ENSGT00940000162230	ENSGT00390000013040
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000167622.a	ENSGT00940000163466.g.a	ENSGT00940000162230	ENSGT00390000013040
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000163466.g.a	ENSGT00940000167622.a	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040
Aplocheiloidei	ANCESTRAL SPECIES	5	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000163466.g.a	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Mangrove rivulus	MODERN SPECIES	9	MAP1B (ENSKMAG00000009314)	ptcd2 (ENSKMAG00000009329)	CACFD1 (ENSKMAG00000009353)	ENSKMAG00000009385	garnl3 (ENSKMAG00000009465)	ptges (ENSKMAG00000009677) #32	usp20 (ENSKMAG00000009697) #36	RPL7A (ENSKMAG00000009779)	ENSKMAG00000009859	surf1 (ENSKMAG00000009892)	surf6 (ENSKMAG00000009936)	kyat1 (ENSKMAG00000009948) #16	spout1 (ENSKMAG00000009988) #15	ST6GALNAC6 (ENSKMAG00000010011)	st6galnac4 (ENSKMAG00000010032)	miga2 (ENSKMAG00000010056) #22	dolpp1 (ENSKMAG00000010112) #23	NTNG2 (ENSKMAG00000010182)	rapgef1b (ENSKMAG00000010399)	uck1 (ENSKMAG00000010542)	ENSKMAG00000010568	lrrc8aa (ENSKMAG00000010580) #17	phyhd1 (ENSKMAG00000010595) #18	dolk (ENSKMAG00000010614) #19	NUP188 (ENSKMAG00000010645) #20	cdk5rap2 (ENSKMAG00000010733)	B3GALT9 (ENSKMAG00000010840)	psmd5 (ENSKMAG00000010852)	KCNT1 (ENSKMAG00000010894)	camsap1a (ENSKMAG00000010972)	notch1a (ENSKMAG00000011050)
Turquoise killifish	MODERN SPECIES	1611	DOLPP1 (ENSNFUG00015005167) #23	MAP1B (ENSNFUG00015005196)	ptcd2 (ENSNFUG00015005220)	CACFD1 (ENSNFUG00015005239)	ENSNFUG00015005249	GARNL3 (ENSNFUG00015005423)	ptges (ENSNFUG00015006244) #32	USP20 (ENSNFUG00015006390) #36	RPL7A (ENSNFUG00015007670)	surf1 (ENSNFUG00015007701)	SURF6 (ENSNFUG00015007712)	CCBL1 (ENSNFUG00015007724) #16	spout1 (ENSNFUG00015007895) #15	ST6GALNAC6 (ENSNFUG00015007948)	ST6GALNAC4 (ENSNFUG00015007952)	FAM73B (ENSNFUG00015007961) #22	ARHGEF28 (ENSNFUG00015007985)	ENC1 (ENSNFUG00015008026)	PITPNM2 (ENSNFUG00015008110)	CABZ01117349.1 (ENSNFUG00015008278)	ZSWIM6 (ENSNFUG00015008475)	ENSNFUG00015008584	mat2al (ENSNFUG00015008587)	ENSNFUG00015008593	ENSNFUG00015008598	hnrnpd (ENSNFUG00015008606)	ENOPH1 (ENSNFUG00015008609)	TMEM150C (ENSNFUG00015008611)	SEC31A (ENSNFUG00015008627)	LIN54 (ENSNFUG00015008673)	cops4 (ENSNFUG00015008730)
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000163466.g.a	ENSGT00940000167622.a	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040
NAME_4	ANCESTRAL SPECIES		ENSGT00940000155897.ub.b	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Mummichog	MODERN SPECIES	743																miga2 (ENSFHEG00000022105) #22	dolpp1 (ENSFHEG00000022112) #23	NTNG2 (ENSFHEG00000022146)
Sheepshead minnow	MODERN SPECIES	376			ENSCVAG00000016000	ENSCVAG00000015991	garnl3 (ENSCVAG00000015980)	ptges (ENSCVAG00000015857) #32	usp20 (ENSCVAG00000015837) #36	RPL7A (ENSCVAG00000015763)	ENSCVAG00000015752	surf1 (ENSCVAG00000015741)	surf6 (ENSCVAG00000015730)	kyat1 (ENSCVAG00000015721) #16	spout1 (ENSCVAG00000015713) #15	ST6GALNAC6 (ENSCVAG00000015687)	st6galnac4 (ENSCVAG00000015673)	miga2 (ENSCVAG00000015667) #22	dolpp1 (ENSCVAG00000015600) #23	NTNG2 (ENSCVAG00000015576)	tmem50a (ENSCVAG00000015569)	rapgef1b (ENSCVAG00000015553)	uck1 (ENSCVAG00000015470)	dnlz (ENSCVAG00000015440)	lrrc8aa (ENSCVAG00000015435) #17	phyhd1 (ENSCVAG00000015430) #18	dolk (ENSCVAG00000015379) #19	NUP188 (ENSCVAG00000015370) #20	cdk5rap2 (ENSCVAG00000015268)	ENSCVAG00000015084	B3GALT9 (ENSCVAG00000015068)	psmd5 (ENSCVAG00000015062)	KCNT1 (ENSCVAG00000015046)
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000163466.g.a	ENSGT00940000167622.a	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040
Poecilia	ANCESTRAL SPECIES	12	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
NAME_6	ANCESTRAL SPECIES	13	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	532								RPL7A (ENSPFOG00000007707)	surf1 (ENSPFOG00000007583)	surf6 (ENSPFOG00000007527)	kyat1 (ENSPFOG00000007267) #16	spout1 (ENSPFOG00000022119) #15	ST6GALNAC6 (ENSPFOG00000007184)	miga2 (ENSPFOG00000007042) #22	st6galnac4 (ENSPFOG00000007136)	miga2 (ENSPFOG00000006841) #22	dolpp1 (ENSPFOG00000006746) #23	NTNG2 (ENSPFOG00000006612)	rapgef1b (ENSPFOG00000006320)	uck1 (ENSPFOG00000006208)	dnlz (ENSPFOG00000006199)	lrrc8aa (ENSPFOG00000006171) #17	dolk (ENSPFOG00000020426) #19	phyhd1 (ENSPFOG00000024517) #18	NUP188 (ENSPFOG00000005437) #20	cdk5rap2 (ENSPFOG00000005000)	ENSPFOG00000004100	B3GALT9 (ENSPFOG00000020425)	psmd5 (ENSPFOG00000003886)	KCNT1 (ENSPFOG00000003473)	camsap1a (ENSPFOG00000003292)
Amazon molly	MODERN SPECIES	532										RPL7A (ENSPFOG00000007707)	surf1 (ENSPFOG00000007583)	surf6 (ENSPFOG00000007527)	kyat1 (ENSPFOG00000007267) #16	spout1 (ENSPFOG00000022119) #15	ST6GALNAC6 (ENSPFOG00000007184)	miga2 (ENSPFOG00000007042) #22	st6galnac4 (ENSPFOG00000007136)	miga2 (ENSPFOG00000006841) #22	dolpp1 (ENSPFOG00000006746) #23	NTNG2 (ENSPFOG00000006612)	rapgef1b (ENSPFOG00000006320)	uck1 (ENSPFOG00000006208)	dnlz (ENSPFOG00000006199)	lrrc8aa (ENSPFOG00000006171) #17	dolk (ENSPFOG00000020426) #19	phyhd1 (ENSPFOG00000024517) #18	NUP188 (ENSPFOG00000005437) #20	cdk5rap2 (ENSPFOG00000005000)	ENSPFOG00000004100	B3GALT9 (ENSPFOG00000020425)	psmd5 (ENSPFOG00000003886)
Sailfin molly	MODERN SPECIES	1684					garnl3 (ENSPLAG00000022095)	ptges (ENSPLAG00000022028) #32	usp20 (ENSPLAG00000021996) #36	RPL7A (ENSPLAG00000021922)	ENSPLAG00000021906	surf1 (ENSPLAG00000021894)	surf6 (ENSPLAG00000021874)	kyat1 (ENSPLAG00000021870) #16	spout1 (ENSPLAG00000021861) #15	ST6GALNAC6 (ENSPLAG00000021852)	st6galnac4 (ENSPLAG00000021836)	miga2 (ENSPLAG00000021805) #22	dolpp1 (ENSPLAG00000021749) #23
Guppy	MODERN SPECIES	442	MAP1B (ENSPREG00000021787)	ptcd2 (ENSPREG00000021797)	CACFD1 (ENSPREG00000021807)	ENSPREG00000021821	garnl3 (ENSPREG00000021844)	ptges (ENSPREG00000021881) #32	usp20 (ENSPREG00000021897) #36	RPL7A (ENSPREG00000021928)	ENSPREG00000021953	surf1 (ENSPREG00000021958)	surf6 (ENSPREG00000021969)	kyat1 (ENSPREG00000021980) #16	spout1 (ENSPREG00000022001) #15	ST6GALNAC6 (ENSPREG00000022011)	st6galnac4 (ENSPREG00000000602)	miga2 (ENSPREG00000000650) #22	dolpp1 (ENSPREG00000000657) #23	NTNG2 (ENSPREG00000000693)	rapgef1b (ENSPREG00000000728)	ENSPREG00000000916	uck1 (ENSPREG00000000989)	dnlz (ENSPREG00000001008)	lrrc8aa (ENSPREG00000001041) #17	phyhd1 (ENSPREG00000001069) #18	dolk (ENSPREG00000001115) #19	NUP188 (ENSPREG00000001155) #20	ENSPREG00000001341	ENSPREG00000001403	B3GALT9 (ENSPREG00000001506)	psmd5 (ENSPREG00000001511)	KCNT1 (ENSPREG00000001577)
Platyfish	MODERN SPECIES	22	ptger4b (ENSXMAG00000026058)	MAP1B (ENSXMAG00000005956)	ptcd2 (ENSXMAG00000005940)	CACFD1 (ENSXMAG00000005937)	ENSXMAG00000028291	garnl3 (ENSXMAG00000005901)	ptges (ENSXMAG00000005893) #32	usp20 (ENSXMAG00000005842) #36	RPL7A (ENSXMAG00000021562)	surf1 (ENSXMAG00000005824)	surf6 (ENSXMAG00000024608)	kyat1 (ENSXMAG00000005791) #16	spout1 (ENSXMAG00000005778) #15	ST6GALNAC6 (ENSXMAG00000023588)	st6galnac4 (ENSXMAG00000005758)	miga2 (ENSXMAG00000005746) #22	dolpp1 (ENSXMAG00000005734) #23	NTNG2 (ENSXMAG00000023300)	ENSXMAG00000028380	ENSXMAG00000027674	rapgef1b (ENSXMAG00000005703)	uck1 (ENSXMAG00000005693)	dnlz (ENSXMAG00000025283)	lrrc8aa (ENSXMAG00000005685) #17	dolk (ENSXMAG00000019587) #19	phyhd1 (ENSXMAG00000005677) #18	NUP188 (ENSXMAG00000005642) #20	cdk5rap2 (ENSXMAG00000005618)	ENSXMAG00000026533	ENSXMAG00000028819	B3GALT9 (ENSXMAG00000005391)
Oryzias	ANCESTRAL SPECIES	9	ENSGT01050000244902.a.a.a.a.a.a	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000167622.a	ENSGT00390000007153.a.a.b	ENSGT00940000157646	ENSGT00510000047171.y
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT01050000244902.a.a.a.a.a.a	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000167622.a	ENSGT00390000007153.a.a.b	ENSGT00940000157646	ENSGT00510000047171.y
Indian medaka	MODERN SPECIES	30	ptger4b (ENSOMEG00000012457)	MAP1B (ENSOMEG00000012440)	ptcd2 (ENSOMEG00000012396)	CACFD1 (ENSOMEG00000012370)	ENSOMEG00000012338	garnl3 (ENSOMEG00000012232)	ptges (ENSOMEG00000011986) #32	usp20 (ENSOMEG00000000292) #36	RPL7A (ENSOMEG00000011848)	surf1 (ENSOMEG00000011803)	surf6 (ENSOMEG00000011772)	kyat1 (ENSOMEG00000011754) #16	spout1 (ENSOMEG00000011687) #15	ST6GALNAC6 (ENSOMEG00000011708)	st6galnac4 (ENSOMEG00000011659)	miga2 (ENSOMEG00000011612) #22	dolpp1 (ENSOMEG00000011573) #23	NTNG2 (ENSOMEG00000011551)	ENSOMEG00000011524	rapgef1b (ENSOMEG00000011461)	uck1 (ENSOMEG00000011122)	dnlz (ENSOMEG00000011091)	lrrc8aa (ENSOMEG00000011072) #17	phyhd1 (ENSOMEG00000011039) #18	dolk (ENSOMEG00000011020) #19	ENSOMEG00000011008 #20	NUP188 (ENSOMEG00000010970) #20	ENSOMEG00000010863	ENSOMEG00000010842	ENSOMEG00000010815	GOLPH3 (ENSOMEG00000010805)
Javanese ricefish	MODERN SPECIES	3	ptger4b (ENSOJAG00000010018)	MAP1B (ENSOJAG00000009994)	ptcd2 (ENSOJAG00000009981)	CACFD1 (ENSOJAG00000009958)	ENSOJAG00000009943	garnl3 (ENSOJAG00000008353)	ptges (ENSOJAG00000008202) #32	usp20 (ENSOJAG00000007266) #36	RPL7A (ENSOJAG00000006972)	surf1 (ENSOJAG00000006928)	surf6 (ENSOJAG00000006920)	kyat1 (ENSOJAG00000006113) #16	spout1 (ENSOJAG00000005985) #15	ST6GALNAC6 (ENSOJAG00000005967)	st6galnac4 (ENSOJAG00000005924)	miga2 (ENSOJAG00000022402) #22	dolpp1 (ENSOJAG00000022395) #23	NTNG2 (ENSOJAG00000022391)	rapgef1b (ENSOJAG00000022236)	uck1 (ENSOJAG00000022220)	dnlz (ENSOJAG00000022213)	lrrc8aa (ENSOJAG00000022209) #17	phyhd1 (ENSOJAG00000022169) #18	dolk (ENSOJAG00000022157) #19	GOLPH3 (ENSOJAG00000021410)	ENSOJAG00000020968	kcmf1 (ENSOJAG00000020915)	ntrk2b (ENSOJAG00000020873)	hnrpkl (ENSOJAG00000020818)	ENSOJAG00000020754	gna14 (ENSOJAG00000020728)
Oryzias_a	ANCESTRAL SPECIES	12	ENSGT00390000017462	ENSGT01050000244902.a.a.a.a.a.a	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT01060000249721	ENSGT00940000162727.a.b	ENSGT00940000167622.a	ENSGT00390000007153.a.a.b	ENSGT00940000157646
Chinese medaka	MODERN SPECIES	57								RPL7A (ENSOSIG00000014398)	ENSOSIG00000014397	surf1 (ENSOSIG00000014396)	surf6 (ENSOSIG00000014395)	kyat1 (ENSOSIG00000014393) #16	spout1 (ENSOSIG00000014391) #15	ST6GALNAC6 (ENSOSIG00000014387)	st6galnac4 (ENSOSIG00000014385)	miga2 (ENSOSIG00000014330) #22	dolpp1 (ENSOSIG00000014325) #23	NTNG2 (ENSOSIG00000014324)	rapgef1b (ENSOSIG00000014323)	ENSOSIG00000014071 #17	dolk (ENSOSIG00000014066) #19	NUP188 (ENSOSIG00000014054) #20	ENSOSIG00000014022	ENSOSIG00000014010	GOLPH3 (ENSOSIG00000013997)	ITGA1 (ENSOSIG00000013984)	kcmf1 (ENSOSIG00000013974)	ntrk2b (ENSOSIG00000013972)	ntrk2b (ENSOSIG00000013970)	hnrpkl (ENSOSIG00000013931)	ENSOSIG00000013923
Japanese Medaka HdrR	MODERN SPECIES	3	MAP1B (ENSORLG00000003848)	ptcd2 (ENSORLG00000003851)	CACFD1 (ENSORLG00000030378)	ENSORLG00000027629	garnl3 (ENSORLG00000003893)	ptges (ENSORLG00000003915) #32	usp20 (ENSORLG00000003940) #36	surf1 (ENSORLG00000003975)	RPL7A (ENSORLG00000028414)	ENSORLG00000027361	surf6 (ENSORLG00000003980)	kyat1 (ENSORLG00000004002) #16	st6galnac6 (ENSORLG00000024633)	spout1 (ENSORLG00000004049) #15	st6galnac4 (ENSORLG00000004063)	miga2 (ENSORLG00000004102) #22	dolpp1 (ENSORLG00000004112) #23	NTNG2 (ENSORLG00000004138)	ENSORLG00000027609	rapgef1b (ENSORLG00000004191)	uck1 (ENSORLG00000004218)	dnlz (ENSORLG00000004227)	lrrc8aa (ENSORLG00000004238) #17	phyhd1 (ENSORLG00000004266) #18	dolk (ENSORLG00000022279) #19	NUP188 (ENSORLG00000004350) #20	ENSORLG00000024617	ENSORLG00000024880	ENSORLG00000021834	GOLPH3 (ENSORLG00000004559)	ENSORLG00000004609
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000167622	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a
Cichlidae	ANCESTRAL SPECIES	10	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000167622	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000167622	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT01050000244902.a.a.a.a.a.a	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000167622	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a
Haplochromini	ANCESTRAL SPECIES		ENSGT01050000244902.a.a.a.a.a.a	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000167622	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT01050000244902.a.a.a.a.a.a	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000167622.d	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a
P. nyererei	MODERN SPECIES	297	ptger4b (ENSPNYG00000003060)	MAP1B (ENSPNYG00000003076)	ptcd2 (ENSPNYG00000003122)	CACFD1 (ENSPNYG00000003136)	ENSPNYG00000003166	garnl3 (ENSPNYG00000003218)	ptges (ENSPNYG00000003285) #32	usp20 (ENSPNYG00000003304) #36	RPL7A (ENSPNYG00000003411)	surf1 (ENSPNYG00000003395)	surf6 (ENSPNYG00000003445)	kyat1 (ENSPNYG00000003450) #16	spout1 (ENSPNYG00000003463) #15	ST6GALNAC6 (ENSPNYG00000003481)	st6galnac4 (ENSPNYG00000003496)	miga2 (ENSPNYG00000003519) #22	dolpp1 (ENSPNYG00000003578) #23	NTNG2 (ENSPNYG00000003616)	rapgef1b (ENSPNYG00000003665)	uck1 (ENSPNYG00000003788)	dnlz (ENSPNYG00000003831)	lrrc8aa (ENSPNYG00000003865) #17	phyhd1 (ENSPNYG00000003882) #18	dolk (ENSPNYG00000003907) #19	NUP188 (ENSPNYG00000003922) #20	ENSPNYG00000004106	ENSPNYG00000004289	ENSPNYG00000004339	B3GALT9 (ENSPNYG00000004354)	psmd5 (ENSPNYG00000004358)	KCNT1 (ENSPNYG00000004382)
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT01050000244902.a.a.a.a.a.a	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000167622.d	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a
Zebra mbuna	MODERN SPECIES	1110	ptger4b (ENSMZEG00005003648)	MAP1B (ENSMZEG00005003638)	ptcd2 (ENSMZEG00005003625)	CACFD1 (ENSMZEG00005003601)	ENSMZEG00005003583	garnl3 (ENSMZEG00005003460)	ptges (ENSMZEG00005003426) #32	usp20 (ENSMZEG00005003281) #36	RPL7A (ENSMZEG00005003233)	surf1 (ENSMZEG00005003202)	surf6 (ENSMZEG00005003188)	kyat1 (ENSMZEG00005003170) #16	spout1 (ENSMZEG00005003159) #15	ST6GALNAC6 (ENSMZEG00005003126)	st6galnac4 (ENSMZEG00005003097)	miga2 (ENSMZEG00005003042) #22	dolpp1 (ENSMZEG00005003007) #23	NTNG2 (ENSMZEG00005002974)	rapgef1b (ENSMZEG00005002863)	uck1 (ENSMZEG00005002829)	dnlz (ENSMZEG00005002808)	lrrc8aa (ENSMZEG00005002797) #17	phyhd1 (ENSMZEG00005002750) #18	dolk (ENSMZEG00005002745) #19	NUP188 (ENSMZEG00005002658) #20	cdk5rap2 (ENSMZEG00005002555)	ENSMZEG00005002525	ENSMZEG00005002418	B3GALT9 (ENSMZEG00005002398)	psmd5 (ENSMZEG00005002391)	KCNT1 (ENSMZEG00005002333)
Eastern happy	MODERN SPECIES	19	ptcd2 (ENSACLG00000027742)	CACFD1 (ENSACLG00000027744)	ENSACLG00000027747	ENSACLG00000027752	garnl3 (ENSACLG00000027760)	ptges (ENSACLG00000027791) #32	usp20 (ENSACLG00000027797) #36	surf1 (ENSACLG00000027811)	RPL7A (ENSACLG00000027812)	surf6 (ENSACLG00000027819)	kyat1 (ENSACLG00000027823) #16	spout1 (ENSACLG00000027828) #15	ENSACLG00000027834	ST6GALNAC6 (ENSACLG00000027838)	st6galnac4 (ENSACLG00000027840)	miga2 (ENSACLG00000027841) #22	dolpp1 (ENSACLG00000027849) #23	NTNG2 (ENSACLG00000027854)	rapgef1b (ENSACLG00000027860)	uck1 (ENSACLG00000027867)	dnlz (ENSACLG00000027870)	lrrc8aa (ENSACLG00000027871) #17	phyhd1 (ENSACLG00000027872) #18	dolk (ENSACLG00000027875) #19	NUP188 (ENSACLG00000027877) #20	cdk5rap2 (ENSACLG00000027883)	ENSACLG00000027892	ENSACLG00000027895	B3GALT9 (ENSACLG00000027902)	psmd5 (ENSACLG00000027903)	KCNT1 (ENSACLG00000027904)
Burton s mouthbrooder	MODERN SPECIES	287	MAP1B (ENSHBUG00000009201)	ptcd2 (ENSHBUG00000009191)	CACFD1 (ENSHBUG00000009179)	ENSHBUG00000009153	garnl3 (ENSHBUG00000009102)	ptges (ENSHBUG00000008973) #32	usp20 (ENSHBUG00000008947) #36	surf1 (ENSHBUG00000008808)	RPL7A (ENSHBUG00000008785)	surf6 (ENSHBUG00000008764)	kyat1 (ENSHBUG00000008749) #16	spout1 (ENSHBUG00000008743) #15	ST6GALNAC6 (ENSHBUG00000008728)	st6galnac4 (ENSHBUG00000008676)	dolpp1 (ENSHBUG00000008718) #23	miga2 (ENSHBUG00000008642) #22	NTNG2 (ENSHBUG00000008508)	rapgef1b (ENSHBUG00000008457)	uck1 (ENSHBUG00000008388)	dnlz (ENSHBUG00000008344)	lrrc8aa (ENSHBUG00000008312) #17	phyhd1 (ENSHBUG00000008290) #18	dolk (ENSHBUG00000008248) #19	NUP188 (ENSHBUG00000008224) #20	cdk5rap2 (ENSHBUG00000008049)	ENSHBUG00000007803	B3GALT9 (ENSHBUG00000007682)	psmd5 (ENSHBUG00000007664)	KCNT1 (ENSHBUG00000007657)	camsap1a (ENSHBUG00000007594)	notch1a (ENSHBUG00000007562)
Lyretail cichlid	MODERN SPECIES	336	ptger4b (ENSNBRG00000008241)	MAP1B (ENSNBRG00000008192)	ptcd2 (ENSNBRG00000008174)	CACFD1 (ENSNBRG00000008151)	ENSNBRG00000008126	garnl3 (ENSNBRG00000008022)	ptges (ENSNBRG00000007999) #32	usp20 (ENSNBRG00000007932) #36	RPL7A (ENSNBRG00000007869)	surf1 (ENSNBRG00000007828)	surf6 (ENSNBRG00000007805)	kyat1 (ENSNBRG00000007769) #16	spout1 (ENSNBRG00000007733) #15	ST6GALNAC6 (ENSNBRG00000007711)	st6galnac4 (ENSNBRG00000007687)	miga2 (ENSNBRG00000007646) #22	dolpp1 (ENSNBRG00000007607) #23	NTNG2 (ENSNBRG00000007569)	rapgef1b (ENSNBRG00000007494)	uck1 (ENSNBRG00000007467)	dnlz (ENSNBRG00000007456)	lrrc8aa (ENSNBRG00000007447) #17	phyhd1 (ENSNBRG00000007401) #18	dolk (ENSNBRG00000007387) #19	NUP188 (ENSNBRG00000007294) #20	cdk5rap2 (ENSNBRG00000007141)	ENSNBRG00000007008	B3GALT9 (ENSNBRG00000006983)	psmd5 (ENSNBRG00000006970)	ENSNBRG00000006956	KCNT1 (ENSNBRG00000006901)
Nile tilapia	MODERN SPECIES	19	ptcd2 (ENSONIG00000011269)	cacfd1 (ENSONIG00000027268)	ENSONIG00000011272	garnl3 (ENSONIG00000011273)	ptges (ENSONIG00000011278) #32	usp20 (ENSONIG00000011281) #36	RPL7A (ENSONIG00000011286)	ENSONIG00000028395	surf1 (ENSONIG00000011291)	surf6 (ENSONIG00000011294)	kyat1 (ENSONIG00000011295) #16	spout1 (ENSONIG00000011299) #15	ENSONIG00000040717	ST6GALNAC6 (ENSONIG00000039951)	st6galnac4 (ENSONIG00000043090)	miga2 (ENSONIG00000007365) #22	dolpp1 (ENSONIG00000007370) #23	NTNG2 (ENSONIG00000007373)	rapgef1b (ENSONIG00000007374)	uck1 (ENSONIG00000028104)	dnlz (ENSONIG00000007380)	lrrc8aa (ENSONIG00000007383) #17	phyhd1 (ENSONIG00000007384) #18	dolk (ENSONIG00000007387) #19	NUP188 (ENSONIG00000007388) #20	ENSONIG00000007403	ENSONIG00000028088	ENSONIG00000007416	B3GALT9 (ENSONIG00000007435)	psmd5 (ENSONIG00000007437)	KCNT1 (ENSONIG00000007444)
Midas cichlid	MODERN SPECIES	1127	MAP1B (ENSACIG00000002074)	ptcd2 (ENSACIG00000002053)	CACFD1 (ENSACIG00000002027)	ENSACIG00000002004	garnl3 (ENSACIG00000001937)	ptges (ENSACIG00000001917) #32	usp20 (ENSACIG00000001853) #36	RPL7A (ENSACIG00000001793)	ENSACIG00000001780	surf1 (ENSACIG00000001760)	ENSACIG00000001752	kyat1 (ENSACIG00000001684) #16	spout1 (ENSACIG00000001649) #15	ST6GALNAC6 (ENSACIG00000001622)	st6galnac4 (ENSACIG00000001603)	miga2 (ENSACIG00000001561) #22
Pomacentridae	ANCESTRAL SPECIES	12	ENSGT00940000155897.tb.b	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Pomacentridae_A	ANCESTRAL SPECIES	10	ENSGT00940000155897.tb.b	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00990000204427	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Amphiprion	ANCESTRAL SPECIES	5	ENSGT00940000155897.tb.b	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00990000204427	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Orange clownfish	MODERN SPECIES	7	ptcd2 (ENSAPEG00000022926)	ENSAPEG00000022907	CACFD1 (ENSAPEG00000022896)	ENSAPEG00000022838	garnl3 (ENSAPEG00000022736)	ptges (ENSAPEG00000022713) #32	usp20 (ENSAPEG00000022559) #36	ENSAPEG00000022502	RPL7A (ENSAPEG00000022489)	surf1 (ENSAPEG00000022454)	surf6 (ENSAPEG00000022442)	kyat1 (ENSAPEG00000022413) #16	spout1 (ENSAPEG00000022391) #15	ST6GALNAC6 (ENSAPEG00000022379)	st6galnac4 (ENSAPEG00000022366)	miga2 (ENSAPEG00000022316) #22	dolpp1 (ENSAPEG00000022294) #23	NTNG2 (ENSAPEG00000022268)	rapgef1b (ENSAPEG00000022056)	uck1 (ENSAPEG00000021995)	dnlz (ENSAPEG00000021985)	lrrc8aa (ENSAPEG00000021979) #17	phyhd1 (ENSAPEG00000021937) #18	dolk (ENSAPEG00000021930) #19	NUP188 (ENSAPEG00000021846) #20	cdk5rap2 (ENSAPEG00000021595)	ENSAPEG00000021550	B3GALT9 (ENSAPEG00000021536)	psmd5 (ENSAPEG00000021521)	KCNT1 (ENSAPEG00000021479)	camsap1a (ENSAPEG00000021431)
Clown anemonefish	MODERN SPECIES	3578					LRFN5 (ENSAOCG00000015564)	nat9 (ENSAOCG00000001079)	ptges (ENSAOCG00000015611) #32	usp20 (ENSAOCG00000015727) #36	RPL7A (ENSAOCG00000015778)	surf1 (ENSAOCG00000015824)	surf6 (ENSAOCG00000015839)	kyat1 (ENSAOCG00000015857) #16	spout1 (ENSAOCG00000001097) #15	ST6GALNAC6 (ENSAOCG00000015895)	st6galnac4 (ENSAOCG00000015904)	miga2 (ENSAOCG00000001099) #22	dolpp1 (ENSAOCG00000016049) #23	NTNG2 (ENSAOCG00000016092)	uck1 (ENSAOCG00000016148)	rapgef1b (ENSAOCG00000016228)	dnlz (ENSAOCG00000016242)	lrrc8aa (ENSAOCG00000016251) #17	phyhd1 (ENSAOCG00000016294) #18	dolk (ENSAOCG00000016310) #19
Spiny chromis	MODERN SPECIES	45	MAP1B (ENSAPOG00000020677)	ptcd2 (ENSAPOG00000020682)	CACFD1 (ENSAPOG00000020689)	ENSAPOG00000020748	garnl3 (ENSAPOG00000020817)	ptges (ENSAPOG00000020828) #32	usp20 (ENSAPOG00000020941) #36	ENSAPOG00000020979	RPL7A (ENSAPOG00000020989)	surf1 (ENSAPOG00000021001)	surf6 (ENSAPOG00000021015)	kyat1 (ENSAPOG00000021062) #16	spout1 (ENSAPOG00000021073) #15	ST6GALNAC6 (ENSAPOG00000021084)	st6galnac4 (ENSAPOG00000021093)	miga2 (ENSAPOG00000021179) #22	dolpp1 (ENSAPOG00000021218) #23	NTNG2 (ENSAPOG00000021253)	rapgef1b (ENSAPOG00000021439)	uck1 (ENSAPOG00000021284)	rdh12 (ENSAPOG00000021503)	ENSAPOG00000021555	fam163ab (ENSAPOG00000021562)	ENSAPOG00000021687
Bicolor damselfish	DUPLICATION
Bicolor damselfish	MODERN SPECIES	841																miga2 (ENSSPAG00000005461) #22	dolpp1 (ENSSPAG00000005423) #23	NTNG2 (ENSSPAG00000005391)	rapgef1b (ENSSPAG00000005260)	uck1 (ENSSPAG00000005231)	lrrc8aa (ENSSPAG00000005221) #17	dolk (ENSSPAG00000005217) #19	phyhd1 (ENSSPAG00000005171) #18	NUP188 (ENSSPAG00000005075) #20
Bicolor damselfish	MODERN SPECIES	2706														ENSSPAG00000016188	st6galnac4 (ENSSPAG00000016173)	miga2 (ENSSPAG00000016138) #22
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Tetraodontidae	ANCESTRAL SPECIES	19	ENSGT01050000244902.a.a.a.a.a.a	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Fugu	MODERN SPECIES	18	ptger4b (ENSTRUG00000028946)	MAP1B (ENSTRUG00000018435)	ptcd2 (ENSTRUG00000018429)	cacfd1 (ENSTRUG00000033138)	ENSTRUG00000018423	garnl3 (ENSTRUG00000018417)	ptges (ENSTRUG00000020670) #32	usp20 (ENSTRUG00000018404) #36	RPL7A (ENSTRUG00000018399)	surf1 (ENSTRUG00000025293)	surf6 (ENSTRUG00000023872)	kyat1 (ENSTRUG00000018388) #16	spout1 (ENSTRUG00000024910) #15	ST6GALNAC6 (ENSTRUG00000023899)	st6galnac4 (ENSTRUG00000018377)	miga2 (ENSTRUG00000018370) #22	dolpp1 (ENSTRUG00000018367) #23	NTNG2 (ENSTRUG00000018358)	rapgef1b (ENSTRUG00000018338)	uck1 (ENSTRUG00000018333)	dnlz (ENSTRUG00000032319)	lrrc8aa (ENSTRUG00000018330) #17	dolk (ENSTRUG00000018325) #19	NUP188 (ENSTRUG00000018293) #20	ENSTRUG00000018229	ENSTRUG00000027922	B3GALT9 (ENSTRUG00000018190)	psmd5 (ENSTRUG00000018185)	KCNT1 (ENSTRUG00000021073)	notch1a (ENSTRUG00000018113)	ENSTRUG00000018095
Tetraodon	MODERN SPECIES	19	ttc33 (ENSTNIG00000007492)	ptger4b (ENSTNIG00000007493)	MAP1B (ENSTNIG00000007494)	ptcd2 (ENSTNIG00000007495)	CACFD1 (ENSTNIG00000007496)	ENSTNIG00000007497	garnl3 (ENSTNIG00000007498)	ptges (ENSTNIG00000007499) #32	usp20 (ENSTNIG00000007500) #36	rpl7a (ENSTNIG00000007501)	surf1 (ENSTNIG00000007502)	kyat1 (ENSTNIG00000007504) #16	surf6 (ENSTNIG00000007503)	spout1 (ENSTNIG00000007505) #15	ST6GALNAC6 (ENSTNIG00000007506)	miga2 (ENSTNIG00000007507) #22	dolpp1 (ENSTNIG00000007508) #23	ENSTNIG00000007509	rapgef1b (ENSTNIG00000007510)	uck1 (ENSTNIG00000007511)	dnlz (ENSTNIG00000007512)	SEMA4D (ENSTNIG00000007513)	add1 (ENSTNIG00000007514)	C18orf32 (ENSTNIG00000007515)	rad1 (ENSTNIG00000000006)	heca (ENSTNIG00000007516)	mtif3 (ENSTNIG00000000712)	knstrn (ENSTNIG00000000817)	ENSTNIG00000001526	bxdc2 (ENSTNIG00000007517)	dnajc21 (ENSTNIG00000007518)
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Ballan wrasse	MODERN SPECIES	70	ptcd2 (ENSLBEG00000024871)	CACFD1 (ENSLBEG00000024855)	ENSLBEG00000024840	garnl3 (ENSLBEG00000024716)	ptges (ENSLBEG00000024640) #32	ENSLBEG00000024621	usp20 (ENSLBEG00000024527) #36	rpl7a (ENSLBEG00000024398)	surf1 (ENSLBEG00000024327)	surf6 (ENSLBEG00000024311)	kyat1 (ENSLBEG00000024280) #16	kyat1 (ENSLBEG00000024238) #16	spout1 (ENSLBEG00000024217) #15	ST6GALNAC6 (ENSLBEG00000024190)	st6galnac4 (ENSLBEG00000024169)	miga2 (ENSLBEG00000024061) #22	dolpp1 (ENSLBEG00000024009) #23	ENSLBEG00000023976	USP48 (ENSLBEG00000023923)	NTNG2 (ENSLBEG00000023848)	ENSLBEG00000023813	rapgef1b (ENSLBEG00000023625)	uck1 (ENSLBEG00000023559)	dnlz (ENSLBEG00000023529)	lrrc8aa (ENSLBEG00000023511) #17	phyhd1 (ENSLBEG00000023475) #18	dolk (ENSLBEG00000023453) #19	NUP188 (ENSLBEG00000023382) #20	cdk5rap2 (ENSLBEG00000023310)	ENSLBEG00000023147	B3GALT9 (ENSLBEG00000023111)
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Perciformes	ANCESTRAL SPECIES	16	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Cottioidei	ANCESTRAL SPECIES	18	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT01030000237506	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000163466	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l	ENSGT00940000157157.b.a.b	ENSGT00940000159324
Stickleback	MODERN SPECIES	13	ttc33 (ENSGACG00000015928)	ptger4b (ENSGACG00000015930)	MAP1B (ENSGACG00000015932)	ptcd2 (ENSGACG00000015934)	CACFD1 (ENSGACG00000015938)	ENSGACG00000015941	garnl3 (ENSGACG00000015942)	ptges (ENSGACG00000015945) #32	usp20 (ENSGACG00000015949) #36	RPL7A (ENSGACG00000015957)	surf1 (ENSGACG00000015983)	ENSGACG00000015989	kyat1 (ENSGACG00000015991) #16	ST6GALNAC6 (ENSGACG00000016008)	st6galnac4 (ENSGACG00000016013)	miga2 (ENSGACG00000016016) #22	dolpp1 (ENSGACG00000016018) #23	NTNG2 (ENSGACG00000016021)	rapgef1b (ENSGACG00000016022)	uck1 (ENSGACG00000016027)	dnlz (ENSGACG00000016036)	lrrc8aa (ENSGACG00000016038) #17	phyhd1 (ENSGACG00000016040) #18	NUP188 (ENSGACG00000016051) #20	ENSGACG00000016058	ENSGACG00000016062	KCNT1 (ENSGACG00000016074)	camsap1a (ENSGACG00000016079)	notch1a (ENSGACG00000016083)	SEC16A (ENSGACG00000016085)	rpl28 (ENSGACG00000016089)
Lumpfish	MODERN SPECIES	3	btf3 (ENSCLMG00005018714)	foxd1 (ENSCLMG00005018713)	fcho2 (ENSCLMG00005017607)	TNPO1 (ENSCLMG00005017598)	CYB561A3 (ENSCLMG00005017550)	tnfrsfa (ENSCLMG00005017545)	unc5da (ENSCLMG00005017541)	aqp3b (ENSCLMG00005017537)	ENSCLMG00005017536	rtknb (ENSCLMG00005017535)	KYAT1 (ENSCLMG00005017506) #16	KYAT1 (ENSCLMG00005017500) #16	spout1 (ENSCLMG00005017499) #15	ST6GALNAC6 (ENSCLMG00005017497)	st6galnac4 (ENSCLMG00005017496)	miga2 (ENSCLMG00005017475) #22	dolpp1 (ENSCLMG00005017474) #23	NTNG2 (ENSCLMG00005017473)	ENSCLMG00005017472 #17	phyhd1 (ENSCLMG00005017471) #18	dolk (ENSCLMG00005017470) #19	NUP188 (ENSCLMG00005016116) #20	cdk5rap2 (ENSCLMG00005016087)	ENSCLMG00005016085	KCNT1 (ENSCLMG00005016070)	ENSCLMG00005016068	ENSCLMG00005014479	pik3r1 (ENSCLMG00005014157)	ENSCLMG00005010858	TRAF2 (ENSCLMG00005010822)	ENSCLMG00005010821
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT01050000244902.a.a.a.a.a.a	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Pike perch	MODERN SPECIES	33	ptcd2 (ENSSLUG00000021435)	CACFD1 (ENSSLUG00000021432)	ENSSLUG00000021423	garnl3 (ENSSLUG00000021236)	ptges (ENSSLUG00000021210) #32	usp20 (ENSSLUG00000017439) #36	RPL7A (ENSSLUG00000017153)	surf1 (ENSSLUG00000017139)	surf6 (ENSSLUG00000017133)	kyat1 (ENSSLUG00000017126) #16	ENSSLUG00000017120	kyat1 (ENSSLUG00000017112) #16	spout1 (ENSSLUG00000016781) #15	ST6GALNAC6 (ENSSLUG00000016761)	st6galnac4 (ENSSLUG00000016758)	miga2 (ENSSLUG00000016718) #22	dolpp1 (ENSSLUG00000016696) #23	NTNG2 (ENSSLUG00000016689)	rapgef1b (ENSSLUG00000016284)	uck1 (ENSSLUG00000016221)	dnlz (ENSSLUG00000016218)	lrrc8aa (ENSSLUG00000016208) #17	phyhd1 (ENSSLUG00000015986) #18	dolk (ENSSLUG00000015946) #19	NUP188 (ENSSLUG00000015753) #20	ENSSLUG00000015677	cdk5rap2 (ENSSLUG00000015650)	ENSSLUG00000015642	B3GALT9 (ENSSLUG00000015634)	psmd5 (ENSSLUG00000015606)	KCNT1 (ENSSLUG00000015334)
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	3	ENSCGOG00000004166	rpl28 (ENSCGOG00000004077)	pdcl (ENSCGOG00000012781)	cirbpa (ENSCGOG00000012779)	PTGS1 (ENSCGOG00000012766)	ENSCGOG00000012761	st8sia5 (ENSCGOG00000012756)	RNF165 (ENSCGOG00000012735)	zgc:77838 (ENSCGOG00000012734)	atp5fa1 (ENSCGOG00000012479)	hwa (ENSCGOG00000012469)	ENSCGOG00000012466	ENSCGOG00000012464	ENSCGOG00000012458	ENSCGOG00000012454	miga2 (ENSCGOG00000012450) #22	dolpp1 (ENSCGOG00000012449) #23	ENSCGOG00000012447	miga2 (ENSCGOG00000012443) #22	dolpp1 (ENSCGOG00000012432) #23	ENSCGOG00000012426	NTNG2 (ENSCGOG00000012425)	ENSCGOG00000012424	ENSCGOG00000012423	rapgef1b (ENSCGOG00000012015)	uck1 (ENSCGOG00000011922)	dnlz (ENSCGOG00000011914)	lrrc8aa (ENSCGOG00000011909) #17	phyhd1 (ENSCGOG00000011822) #18	dolk (ENSCGOG00000011819) #19	NUP188 (ENSCGOG00000011240) #20
Channel bull blenny	MODERN SPECIES	3	cirbpa (ENSCGOG00000012779)	PTGS1 (ENSCGOG00000012766)	ENSCGOG00000012761	st8sia5 (ENSCGOG00000012756)	RNF165 (ENSCGOG00000012735)	zgc:77838 (ENSCGOG00000012734)	atp5fa1 (ENSCGOG00000012479)	hwa (ENSCGOG00000012469)	ENSCGOG00000012466	ENSCGOG00000012464	ENSCGOG00000012458	ENSCGOG00000012454	miga2 (ENSCGOG00000012450) #22	dolpp1 (ENSCGOG00000012449) #23	ENSCGOG00000012447	miga2 (ENSCGOG00000012443) #22	dolpp1 (ENSCGOG00000012432) #23	ENSCGOG00000012426	NTNG2 (ENSCGOG00000012425)	ENSCGOG00000012424	ENSCGOG00000012423	rapgef1b (ENSCGOG00000012015)	uck1 (ENSCGOG00000011922)	dnlz (ENSCGOG00000011914)	lrrc8aa (ENSCGOG00000011909) #17	phyhd1 (ENSCGOG00000011822) #18	dolk (ENSCGOG00000011819) #19	NUP188 (ENSCGOG00000011240) #20	cdk5rap2 (ENSCGOG00000011201)	ENSCGOG00000011197	B3GALT9 (ENSCGOG00000011192)
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
European seabass	MODERN SPECIES	9	ENSDLAG00005006673	ENSDLAG00005006661	ENSDLAG00005006652	ENSDLAG00005030236	ENSDLAG00005004755	ENSDLAG00005001449	ENSDLAG00005001124	ENSDLAG00005000746	ENSDLAG00005000700	ENSDLAG00005000680	ENSDLAG00005000683	ENSDLAG00005030041	ENSDLAG00005000610 #16	spout1 (ENSDLAG00005000535) #15	ENSDLAG00005000515	miga2 (ENSDLAG00005023677) #22	dolpp1 (ENSDLAG00005023666) #23	ENSDLAG00005023653	rapgef1b (ENSDLAG00005023495)	uck1 (ENSDLAG00005023486)	lrrc8aa (ENSDLAG00005023479) #17	phyhd1 (ENSDLAG00005023448) #18	dolk (ENSDLAG00005028297) #19	NUP188 (ENSDLAG00005023401) #20	ENSDLAG00005023329	ENSDLAG00005023321	ENSDLAG00005023314	ENSDLAG00005023312	usp20 (ENSDLAG00005022729) #36	ptges (ENSDLAG00005033508) #32	garnl3 (ENSDLAG00005022433)
Large yellow croaker	MODERN SPECIES	4	CACFD1 (ENSLCRG00005004611)	ENSLCRG00005004609	garnl3 (ENSLCRG00005003305)	ptges (ENSLCRG00005003277) #32	usp20 (ENSLCRG00005003028) #36	surf1 (ENSLCRG00005003004)	RPL7A (ENSLCRG00005002789)	RPL7A (ENSLCRG00005002753)	ENSLCRG00005002748	surf1 (ENSLCRG00005002739)	surf6 (ENSLCRG00005002736)	kyat1 (ENSLCRG00005002729) #16	spout1 (ENSLCRG00005002200) #15	ST6GALNAC6 (ENSLCRG00005002196)	st6galnac4 (ENSLCRG00005002193)	miga2 (ENSLCRG00005002192) #22	dolpp1 (ENSLCRG00005002189) #23	NTNG2 (ENSLCRG00005002186)	ENSLCRG00005002183	rapgef1b (ENSLCRG00005000470)	uck1 (ENSLCRG00005000456)	dnlz (ENSLCRG00005000450)	zgc:77838 (ENSLCRG00005000446)	RNF165 (ENSLCRG00005000440)	LOXHD1 (ENSLCRG00005000408)	st8sia5 (ENSLCRG00005000384)	rpl37 (ENSLCRG00005000370)	PTGS1 (ENSLCRG00005000266)	pdcl (ENSLCRG00005019859)	ENSLCRG00005019858	ENSLCRG00005019857
Gilthead seabream	MODERN SPECIES	3	MAP1B (ENSSAUG00010013641)	ptcd2 (ENSSAUG00010013672)	CACFD1 (ENSSAUG00010013674)	ENSSAUG00010013675	garnl3 (ENSSAUG00010013682)	ptges (ENSSAUG00010013689) #32	usp20 (ENSSAUG00010013702) #36	RPL7A (ENSSAUG00010013978)	ENSSAUG00010014001	surf1 (ENSSAUG00010014005)	surf6 (ENSSAUG00010014012)	kyat1 (ENSSAUG00010014036) #16	spout1 (ENSSAUG00010014260) #15	ST6GALNAC6 (ENSSAUG00010014283)	st6galnac4 (ENSSAUG00010014284)	miga2 (ENSSAUG00010014287) #22	dolpp1 (ENSSAUG00010014289) #23	NTNG2 (ENSSAUG00010014290)	rapgef1b (ENSSAUG00010014293)	uck1 (ENSSAUG00010014325)	ENSSAUG00010014330	dnlz (ENSSAUG00010014332)	lrrc8aa (ENSSAUG00010014334) #17	phyhd1 (ENSSAUG00010014352) #18	dolk (ENSSAUG00010014663) #19	NUP188 (ENSSAUG00010014672) #20	ENSSAUG00010014714	ENSSAUG00010014760	B3GALT9 (ENSSAUG00010014763)	psmd5 (ENSSAUG00010014769)	KCNT1 (ENSSAUG00010014789)
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Zig-zag eel	MODERN SPECIES	3	ttc33 (ENSMAMG00000018553)	ptger4b (ENSMAMG00000018540)	ENSMAMG00000018535	CACFD1 (ENSMAMG00000018529)	ENSMAMG00000018496	garnl3 (ENSMAMG00000018447)	ptges (ENSMAMG00000018416) #32	usp20 (ENSMAMG00000018349) #36	ENSMAMG00000018289	surf1 (ENSMAMG00000025994)	ENSMAMG00000018269	kyat1 (ENSMAMG00000018263) #16	spout1 (ENSMAMG00000018243) #15	ENSMAMG00000018235	st6galnac4 (ENSMAMG00000018228)	miga2 (ENSMAMG00000018196) #22	dolpp1 (ENSMAMG00000027851) #23	ENSMAMG00000018144	rapgef1b (ENSMAMG00000018110)	uck1 (ENSMAMG00000018082)	dnlz (ENSMAMG00000018077)	lrrc8aa (ENSMAMG00000018072) #17	phyhd1 (ENSMAMG00000018063) #18	dolk (ENSMAMG00000018058) #19	NUP188 (ENSMAMG00000017976) #20	cdk5rap2 (ENSMAMG00000017869)	ENSMAMG00000027166	ENSMAMG00000017843	ENSMAMG00000017804	ENSMAMG00000017747	ENSMAMG00000017705
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l	ENSGT00940000157157.b.a.b
Climbing perch	MODERN SPECIES	3	ENSATEG00000012225	ptcd2 (ENSATEG00000012266)	ENSATEG00000012311	ENSATEG00000012324	garnl3 (ENSATEG00000012372)	ptges (ENSATEG00000012444) #32	usp20 (ENSATEG00000012458) #36	RPL7A (ENSATEG00000029437)	ENSATEG00000012619	surf1 (ENSATEG00000012573)	ENSATEG00000012640	kyat1 (ENSATEG00000012650) #16	spout1 (ENSATEG00000029277) #15	ENSATEG00000029342	st6galnac4 (ENSATEG00000012717)	miga2 (ENSATEG00000012727) #22	dolpp1 (ENSATEG00000012798) #23	ENSATEG00000012837	rapgef1b (ENSATEG00000012889)	uck1 (ENSATEG00000013052)	lrrc8aa (ENSATEG00000013062) #17	phyhd1 (ENSATEG00000013069) #18	dolk (ENSATEG00000013104) #19	NUP188 (ENSATEG00000013129) #20	cdk5rap2 (ENSATEG00000013264)	ENSATEG00000013473	ENSATEG00000013483	ENSATEG00000013502	ENSATEG00000029256	ENSATEG00000013629	ENSATEG00000013761
Siamese fighting fish	MODERN SPECIES	3	MAP1B (ENSBSLG00000008416)	ptcd2 (ENSBSLG00000008375)	CACFD1 (ENSBSLG00000008358)	ENSBSLG00000008340	ENSBSLG00000008329	garnl3 (ENSBSLG00000007878)	ptges (ENSBSLG00000007559) #32	usp20 (ENSBSLG00000007200) #36	RPL7A (ENSBSLG00000007126)	surf1 (ENSBSLG00000007100)	surf6 (ENSBSLG00000007095)	kyat1 (ENSBSLG00000006898) #16	spout1 (ENSBSLG00000006838) #15	ST6GALNAC6 (ENSBSLG00000006826)	st6galnac4 (ENSBSLG00000006807)	miga2 (ENSBSLG00000006728) #22	dolpp1 (ENSBSLG00000006471) #23	NTNG2 (ENSBSLG00000006301)	ENSBSLG00000006094	rapgef1b (ENSBSLG00000005151)	uck1 (ENSBSLG00000004826)	nxnl2 (ENSBSLG00000004800)	CSGALNACT1 (ENSBSLG00000004771)	ENSBSLG00000004749	PLPP1 (ENSBSLG00000004537)	mtrex (ENSBSLG00000004500)	DHX29 (ENSBSLG00000004051)	PSTPIP2 (ENSBSLG00000003671)	GOLPH3 (ENSBSLG00000003618)	ENSBSLG00000002968	ENSBSLG00000002727
Carangaria	ANCESTRAL SPECIES	17	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Carangaria_A	ANCESTRAL SPECIES	18	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00990000204427	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162727.a.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l
Seriola	ANCESTRAL SPECIES	116	ENSGT01050000244902.a.a.a.a.a.a	ENSGT00940000159362	ENSGT00940000164999	ENSGT00390000000529	ENSGT00390000009329	ENSGT00940000155897	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a
Greater amberjack	MODERN SPECIES	198	ptger4b (ENSSDUG00000008343)	garnl3 (ENSSDUG00000008200)	ENSSDUG00000008174	CACFD1 (ENSSDUG00000008156)	ptcd2 (ENSSDUG00000008142)	MAP1B (ENSSDUG00000008118)	ptges (ENSSDUG00000008111) #32	usp20 (ENSSDUG00000008028) #36	RPL7A (ENSSDUG00000007967)	surf1 (ENSSDUG00000007956)	surf6 (ENSSDUG00000007947)	kyat1 (ENSSDUG00000007909) #16	spout1 (ENSSDUG00000007894) #15	ST6GALNAC6 (ENSSDUG00000007888)	st6galnac4 (ENSSDUG00000007871)	miga2 (ENSSDUG00000007801) #22	dolpp1 (ENSSDUG00000007756) #23	NTNG2 (ENSSDUG00000007717)	uck1 (ENSSDUG00000007684)	rapgef1b (ENSSDUG00000007544)	uck1 (ENSSDUG00000007516)
Yellowtail amberjack	MODERN SPECIES	3057	ptger4b (ENSSLDG00000015381)	garnl3 (ENSSLDG00000015345)	ENSSLDG00000015316	CACFD1 (ENSSLDG00000015304)	ptcd2 (ENSSLDG00000015284)	MAP1B (ENSSLDG00000015260)	ptges (ENSSLDG00000015242) #32	usp20 (ENSSLDG00000015169) #36	RPL7A (ENSSLDG00000015058)	surf1 (ENSSLDG00000015036)	surf6 (ENSSLDG00000015027)	kyat1 (ENSSLDG00000014977) #16	spout1 (ENSSLDG00000014944) #15	ST6GALNAC6 (ENSSLDG00000014928)	st6galnac4 (ENSSLDG00000014917)	miga2 (ENSSLDG00000014874) #22	DTWD2 (ENSSLDG00000014849)	ENSSLDG00000014771	RTKN (ENSSLDG00000014705)	arid6 (ENSSLDG00000014673)	aqp3b (ENSSLDG00000014659)	unc5da (ENSSLDG00000014570)
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	101	ENSLCAG00010000925	CACFD1 (ENSLCAG00010000927)	ENSLCAG00010000933	garnl3 (ENSLCAG00010000947)	ptges (ENSLCAG00010000971) #32	RPL7A (ENSLCAG00010000978)	usp20 (ENSLCAG00010001033) #36	ENSLCAG00010001472	surf1 (ENSLCAG00010001477)	surf6 (ENSLCAG00010001484)	kyat1 (ENSLCAG00010001488) #16	kyat1 (ENSLCAG00010001500) #16	spout1 (ENSLCAG00010001514) #15	ST6GALNAC6 (ENSLCAG00010001537)	st6galnac4 (ENSLCAG00010001542)	miga2 (ENSLCAG00010001544) #22	dolpp1 (ENSLCAG00010001548) #23	NTNG2 (ENSLCAG00010001551)	rapgef1b (ENSLCAG00010001568)	uck1 (ENSLCAG00010001644)	dnlz (ENSLCAG00010001642)	lrrc8aa (ENSLCAG00010001647) #17	phyhd1 (ENSLCAG00010001651) #18	dolk (ENSLCAG00010001654) #19	NUP188 (ENSLCAG00010001675) #20	ENSLCAG00010001771	ENSLCAG00010001866	B3GALT9 (ENSLCAG00010001917)	psmd5 (ENSLCAG00010001921)	KCNT1 (ENSLCAG00010001943)	camsap1a (ENSLCAG00010001967)
Barramundi perch	MODERN SPECIES	1485													spout1 (ENSLCAG00010009822) #15	ST6GALNAC6 (ENSLCAG00010009812)	st6galnac4 (ENSLCAG00010009810)	miga2 (ENSLCAG00010009805) #22
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00940000155897	ENSGT00390000009329	ENSGT00390000000529	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00990000204427	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000162230	ENSGT00390000013040	ENSGT00940000156880.c.a	ENSGT00950000182975.a.a.b.l	ENSGT00940000157157.b.a.b
Tongue sole	MODERN SPECIES	5	ptger4b (ENSCSEG00000014929)	MAP1B (ENSCSEG00000014931)	ptcd2 (ENSCSEG00000014936)	CACFD1 (ENSCSEG00000014943)	ENSCSEG00000014955	garnl3 (ENSCSEG00000015001)	ptges (ENSCSEG00000015105) #32	usp20 (ENSCSEG00000015113) #36	RPL7A (ENSCSEG00000015141)	surf1 (ENSCSEG00000015166)	surf6 (ENSCSEG00000015172)	kyat1 (ENSCSEG00000015176) #16	spout1 (ENSCSEG00000015216) #15	ST6GALNAC6 (ENSCSEG00000015225)	st6galnac4 (ENSCSEG00000015229)	miga2 (ENSCSEG00000015234) #22	dolpp1 (ENSCSEG00000015260) #23	NTNG2 (ENSCSEG00000015271)	rapgef1b (ENSCSEG00000015291)	uck1 (ENSCSEG00000015307)	dnlz (ENSCSEG00000015321)	lrrc8aa (ENSCSEG00000015329) #17	phyhd1 (ENSCSEG00000015338) #18	dolk (ENSCSEG00000015361) #19	NUP188 (ENSCSEG00000015377) #20	ENSCSEG00000015443	fibcd1b (ENSCSEG00000015460)	ENSCSEG00000015498	pdlim5b (ENSCSEG00000015510)	opn4xa (ENSCSEG00000015526)	gdnfa (ENSCSEG00000015538)
Turbot	MODERN SPECIES	7	ENSSMAG00000010368	ptcd2 (ENSSMAG00000010350)	ENSSMAG00000026577	ENSSMAG00000010324	garnl3 (ENSSMAG00000010116)	ptges (ENSSMAG00000010076) #32	usp20 (ENSSMAG00000009967) #36	ENSSMAG00000009921	ENSSMAG00000009881	surf1 (ENSSMAG00000009854)	ENSSMAG00000025410	kyat1 (ENSSMAG00000009812) #16	spout1 (ENSSMAG00000009786) #15	ENSSMAG00000009772	st6galnac4 (ENSSMAG00000009763)	miga2 (ENSSMAG00000009702) #22	dolpp1 (ENSSMAG00000009644) #23	ENSSMAG00000009623	rapgef1b (ENSSMAG00000009579)	uck1 (ENSSMAG00000009546)	dnlz (ENSSMAG00000032198)	lrrc8aa (ENSSMAG00000009462) #17	phyhd1 (ENSSMAG00000009440) #18	dolk (ENSSMAG00000009434) #19	NUP188 (ENSSMAG00000009352) #20	ENSSMAG00000009277	ENSSMAG00000028675	ENSSMAG00000009172	ENSSMAG00000008991	ENSSMAG00000008955	ENSSMAG00000008857
Tiger tail seahorse	MODERN SPECIES	203	MAP1B (ENSHCOG00000001708)	ptcd2 (ENSHCOG00000001703)	CACFD1 (ENSHCOG00000001698)	ENSHCOG00000001693	garnl3 (ENSHCOG00000001681)	ptges (ENSHCOG00000001669) #32	usp20 (ENSHCOG00000001666) #36	ENSHCOG00000001656 #36	RPL7A (ENSHCOG00000001650)	surf1 (ENSHCOG00000000730)	surf6 (ENSHCOG00000001639)	kyat1 (ENSHCOG00000001634) #16	spout1 (ENSHCOG00000001622) #15	ST6GALNAC6 (ENSHCOG00000001611)	st6galnac4 (ENSHCOG00000001604)	miga2 (ENSHCOG00000001598) #22	dolpp1 (ENSHCOG00000001584) #23	NTNG2 (ENSHCOG00000001575)	rapgef1b (ENSHCOG00000001561)	uck1 (ENSHCOG00000001546)	dnlz (ENSHCOG00000001531)	lrrc8aa (ENSHCOG00000001527) #17	phyhd1 (ENSHCOG00000001523) #18	dolk (ENSHCOG00000001512) #19	ENSHCOG00000000851 #20	NUP188 (ENSHCOG00000001501) #20
Pinecone sodierfish	MODERN SPECIES	3	ENSMMDG00005013193	ENSMMDG00005012809	ptpn11a (ENSMMDG00005011122)	tmed2 (ENSMMDG00005011071)	ddx55 (ENSMMDG00005011062)	eif2b1 (ENSMMDG00005011003)	bcl7a (ENSMMDG00005010994)	ENSMMDG00005010992	ENSMMDG00005010989	ENSMMDG00005010988	denr (ENSMMDG00005010987)	spout1 (ENSMMDG00005010920) #15	ST6GALNAC6 (ENSMMDG00005010918)	st6galnac4 (ENSMMDG00005010917)	ENSMMDG00005010916	miga2 (ENSMMDG00005010873) #22	dolpp1 (ENSMMDG00005010869) #23	NTNG2 (ENSMMDG00005010867)	rapgef1b (ENSMMDG00005009706)	uck1 (ENSMMDG00005009693)	dnlz (ENSMMDG00005009688)	lrrc8aa (ENSMMDG00005009686) #17	phyhd1 (ENSMMDG00005009679) #18	dolk (ENSMMDG00005009673) #19	NUP188 (ENSMMDG00005006589) #20	ENSMMDG00005006552	ZNF703 (ENSMMDG00005006551)	C2orf42 (ENSMMDG00005006502)	DTWD2 (ENSMMDG00005006498)	HOMER1 (ENSMMDG00005006456)	JMY (ENSMMDG00005006450)
Cod	MODERN SPECIES	10	ENSGMOG00000009421	ENSGMOG00000009415	ENSGMOG00000026612	ENSGMOG00000009397	ENSGMOG00000028256	ENSGMOG00000025206	ENSGMOG00000009386	ENSGMOG00000025828 #32	ENSGMOG00000015881 #36	surf1 (ENSGMOG00000015937)	ENSGMOG00000015928	kyat1 (ENSGMOG00000015967) #16	spout1 (ENSGMOG00000015985) #15	ENSGMOG00000016091	st6galnac4 (ENSGMOG00000016107)	miga2 (ENSGMOG00000016113) #22	dolpp1 (ENSGMOG00000016141) #23	ENSGMOG00000016162	rapgef1b (ENSGMOG00000016178)	uck1 (ENSGMOG00000016253)	lrrc8aa (ENSGMOG00000016278) #17	phyhd1 (ENSGMOG00000016285) #18	dolk (ENSGMOG00000020327) #19	ENSGMOG00000035306	NUP188 (ENSGMOG00000016308) #20	ENSGMOG00000027526	ENSGMOG00000022660	cdk5rap2 (ENSGMOG00000016387)	ENSGMOG00000034109	ENSGMOG00000025145	ENSGMOG00000016735
Protacanthopterygii	ANCESTRAL SPECIES	17	ENSGT00940000158107.a.a	ENSGT00730000111133.x	ENSGT00940000164999	ENSGT00940000159362	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00390000009787 #35	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b	ENSGT00940000165164.f	ENSGT00940000155841.c.b #21	ENSGT00940000158633.a	ENSGT00390000001098
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	78	ENSGT00730000111133.x	ENSGT00940000164999	ENSGT00940000159362.c	ENSGT01090000260029.a.a.a.a.a.a.b.b.a.a	ENSGT00390000011980.b.b.c #32	ENSGT00940000158829.f #36	ENSGT00390000009787 #35	ENSGT00390000004339.q	ENSGT00940000153294.f	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114.h	ENSGT00940000157958	ENSGT00390000008565.a.o #22	ENSGT00390000013112.c #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a.f.a	ENSGT00940000156235.c.a.d	ENSGT01020000230412.A.c.a.d	ENSGT00940000154856.B.d.a.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b.e #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b.d	ENSGT00940000165164.f	ENSGT00940000155841.c.b #21	ENSGT00940000158633.a.c
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00940000164999	ENSGT00940000159362.c	ENSGT01090000260029.a.a.a.a.a.a.b.b.a.a.c	ENSGT00390000011980.b.b.c #32	ENSGT00940000158829.f #36	ENSGT00390000009787 #35	ENSGT00390000004339.q	ENSGT00940000153294.f	ENSGT01070000255443	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114.h	ENSGT00940000157958	ENSGT00390000008565.a.o #22	ENSGT00390000013112.c #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a.e.b	ENSGT00940000156235.c.a.d	ENSGT01020000230412.A.c.a.d	ENSGT00940000154856.B.d.a.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b.e #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b.d	ENSGT00950000183190.a.b.b.c.a	ENSGT00940000165164.f	ENSGT00940000155841.c.b #21
Salmo	ANCESTRAL SPECIES		ENSGT00940000164999	ENSGT00940000159362.c	ENSGT01090000260029.a.a.a.a.a.a.b.b.a.a.c	ENSGT00390000011980.b.b.c #32	ENSGT00940000158829.f #36	ENSGT00390000009787 #35	ENSGT00390000004339.q	ENSGT00940000153294.f	ENSGT01070000255443	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114.h	ENSGT00940000157958	ENSGT00390000008565.a.o #22	ENSGT00390000013112.c #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a.e.b	ENSGT00940000156235.c.a.d	ENSGT01020000230412.A.c.a.d	ENSGT00940000154856.B.d.a.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b.e #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x.a #20	ENSGT00950000183190.a.b.b.d	ENSGT00950000183190.a.b.b.c.a	ENSGT00940000165164.f	ENSGT00940000155841.c.b #21
River trout	MODERN SPECIES	15	ENSSTUG00000048086	garnl3 (ENSSTUG00000048129)	ENSSTUG00000048481	ENSSTUG00000048537	ptges (ENSSTUG00000048544) #32	usp20 (ENSSTUG00000048583) #36	zgc:103692 (ENSSTUG00000048749) #35	med22 (ENSSTUG00000048762)	RPL7A (ENSSTUG00000048769)	surf1 (ENSSTUG00000048788)	surf6 (ENSSTUG00000048808)	kyat1 (ENSSTUG00000048821) #16	spout1 (ENSSTUG00000048913) #15	ST6GALNAC6 (ENSSTUG00000048931)	st6galnac4 (ENSSTUG00000048937)	miga2 (ENSSTUG00000048942) #22	dolpp1 (ENSSTUG00000048954) #23	SETX (ENSSTUG00000048979)	NTNG2 (ENSSTUG00000049003)	ENSSTUG00000002976	rapgef1b (ENSSTUG00000003847)	uck1 (ENSSTUG00000004262)	ENSSTUG00000004343	ENSSTUG00000004486	ENSSTUG00000004527	dnlz (ENSSTUG00000004588)	lrrc8aa (ENSSTUG00000004594) #17	phyhd1 (ENSSTUG00000004611) #18	dolk (ENSSTUG00000004637) #19	NUP188 (ENSSTUG00000004750) #20	cdk5rap2 (ENSSTUG00000005443)
Atlantic salmon	MODERN SPECIES		ENSSSAG00000110019	ENSSSAG00000111054	garnl3 (ENSSSAG00000118808)	ENSSSAG00000086523	ENSSSAG00000000519	ptges (ENSSSAG00000050570) #32	usp20 (ENSSSAG00000050792) #36	cssa01h9orf78 (ENSSSAG00000063012) #35	med22 (ENSSSAG00000096207)	rpl7a (ENSSSAG00000063055)	ENSSSAG00000116138	surf1 (ENSSSAG00000063106)	surf6 (ENSSSAG00000063172) #16	spout1 (ENSSSAG00000063366) #15	st6galnac6 (ENSSSAG00000063425)	fam73b (ENSSSAG00000063462) #22	dolpp1 (ENSSSAG00000113144) #23	SETX (ENSSSAG00000063584)	NTNG2 (ENSSSAG00000105472)	ENSSSAG00000104791	ENSSSAG00000108450	ENSSSAG00000089550	rapgef1b (ENSSSAG00000035029)	uck1 (ENSSSAG00000114791)	dnlz (ENSSSAG00000100885)	lrrc8a (ENSSSAG00000046745) #17	ENSSSAG00000046753 #18	nup188 (ENSSSAG00000040336) #20	dolk (ENSSSAG00000086677) #19	ENSSSAG00000046803	ENSSSAG00000117881
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00940000164999	ENSGT00940000159362.c	ENSGT01090000260029.a.a.a.a.a.a.b.b.a.a.c	ENSGT00390000011980.b.b.c #32	ENSGT00940000158829.f #36	ENSGT00390000009787 #35	ENSGT00390000004339.q	ENSGT00940000153294.f	ENSGT01070000255443	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114.h	ENSGT00940000157958	ENSGT00390000008565.a.o #22	ENSGT00390000013112.c #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a.e.b	ENSGT00940000156235.c.a.d	ENSGT01020000230412.A.c.a.d	ENSGT00390000008220.h	ENSGT00940000154856.B.d.a.a	ENSGT00390000008220.g	ENSGT00940000154043.A.j.b.e #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b.c.a	ENSGT00940000155841.c.b #21	ENSGT00940000158633.a.c
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00940000164999	ENSGT00940000159362.c	ENSGT01090000260029.a.a.a.a.a.a.b.b.a.a.c	ENSGT00390000011980.b.b.c #32	ENSGT00940000158829.f #36	ENSGT00390000009787 #35	ENSGT00390000004339.q	ENSGT00940000153294.f	ENSGT01070000255443	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114.h	ENSGT00940000157958	ENSGT00390000008565.a.o #22	ENSGT00390000013112.c #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a.e.b	ENSGT00940000156235.c.a.d	ENSGT01020000230412.A.c.a.d	ENSGT00390000008220.h	ENSGT00940000154043.A.j.b.e #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742.x #20	ENSGT00950000183190.a.b.b.d	ENSGT00940000155841.c.b #21	ENSGT00940000158633.a.c	ENSGT00390000001098.i	ENSGT00730000111912.C.c
Coho salmon	MODERN SPECIES	15	LSM1 (ENSOKIG00005023076)	ENSOKIG00005023098	garnl3 (ENSOKIG00005023198)	ENSOKIG00005024633	ptges (ENSOKIG00005024673) #32	usp20 (ENSOKIG00005024748) #36	zgc:103692 (ENSOKIG00005024934) #35	med22 (ENSOKIG00005024966)	RPL7A (ENSOKIG00005024983)	surf1 (ENSOKIG00005025048)	surf6 (ENSOKIG00005025145)	kyat1 (ENSOKIG00005025218) #16	spout1 (ENSOKIG00005025964) #15	ST6GALNAC6 (ENSOKIG00005026003)	st6galnac4 (ENSOKIG00005026037)	miga2 (ENSOKIG00005026053) #22	dolpp1 (ENSOKIG00005026085) #23	SETX (ENSOKIG00005026141)	NTNG2 (ENSOKIG00005026177)	rapgef1b (ENSOKIG00005026261)	ENSOKIG00005027700	uck1 (ENSOKIG00005027716)	dnlz (ENSOKIG00005027790)	ENSOKIG00005027804	dnlz (ENSOKIG00005027813)	ENSOKIG00005027862	ENSOKIG00005027945	LRRC8A (ENSOKIG00005027965) #17	phyhd1 (ENSOKIG00005027983) #18	dolk (ENSOKIG00005028101) #19	NUP188 (ENSOKIG00005028144) #20
Chinook salmon	MODERN SPECIES	12	ENSOTSG00005017400	ENSOTSG00005017397	ptges (ENSOTSG00005017395) #32	usp20 (ENSOTSG00005017361) #36	zgc:103692 (ENSOTSG00005017360) #35	med22 (ENSOTSG00005017358)	ENSOTSG00005017357	RPL7A (ENSOTSG00005017347)	ENSOTSG00005017346	surf1 (ENSOTSG00005017316)	surf6 (ENSOTSG00005017314)	kyat1 (ENSOTSG00005015230) #16	spout1 (ENSOTSG00005015224) #15	ST6GALNAC6 (ENSOTSG00005015222)	st6galnac4 (ENSOTSG00005015220)	miga2 (ENSOTSG00005015218) #22	dolpp1 (ENSOTSG00005015215) #23	ENSOTSG00005015214	NTNG2 (ENSOTSG00005015209)	NCOA1 (ENSOTSG00005015206)	rpl7l1 (ENSOTSG00005015201)	slc5a6a (ENSOTSG00005014515)	ENSOTSG00005014492	ephx1 (ENSOTSG00005014490)	srp9 (ENSOTSG00005014487)	sh3glb2b (ENSOTSG00005013130) #21	PIP5KL1 (ENSOTSG00005013128)	dpm2 (ENSOTSG00005013127)	ENSOTSG00005013126	eeig1b (ENSOTSG00005012881)	naif1 (ENSOTSG00005012878)
Huchen	MODERN SPECIES	2092				ENSHHUG00000016330	ptges (ENSHHUG00000016313) #32	usp20 (ENSHHUG00000016135) #36	zgc:103692 (ENSHHUG00000016125) #35	med22 (ENSHHUG00000016092)	RPL7A (ENSHHUG00000015879)	surf1 (ENSHHUG00000015839)	surf6 (ENSHHUG00000015826)	kyat1 (ENSHHUG00000015560) #16	spout1 (ENSHHUG00000015505) #15	ST6GALNAC6 (ENSHHUG00000015492)	st6galnac4 (ENSHHUG00000015476)	miga2 (ENSHHUG00000015462) #22	dolpp1 (ENSHHUG00000015413) #23	ENSHHUG00000015399
Salmoninae	ANCESTRAL SPECIES	1244																ENSGT00390000008565.a.p #22	ENSGT00390000013112.d #23	ENSGT00940000153601.a.a.e.b.a.e
Huchen	MODERN SPECIES	501	vps4a (ENSHHUG00000000953)	SNTB2 (ENSHHUG00000001074)	spire2 (ENSHHUG00000001080)	ENSHHUG00000001093	adat1 (ENSHHUG00000001109)	wwp2 (ENSHHUG00000001143)	ENSHHUG00000001519	ENSHHUG00000001524	coq9 (ENSHHUG00000001539)	polr2c (ENSHHUG00000001664)	ciapin1 (ENSHHUG00000001688)	ENSHHUG00000001710	ENSHHUG00000001715	ENSHHUG00000001744	septin15 (ENSHHUG00000001754)	miga2 (ENSHHUG00000001984) #22	dolpp1 (ENSHHUG00000002008) #23
Salmoninae_a	ANCESTRAL SPECIES	80											ENSGT00390000011980.b.b.d #32	ENSGT00940000158829.e #36	ENSGT00390000004339.r	ENSGT00940000153294.e	ENSGT00940000160114.g	ENSGT00390000008565.a.p #22	ENSGT00390000013112.d #23	ENSGT00940000153601.a.a.e.b.a.e.a	ENSGT00940000156235.c.a.c	ENSGT01020000230412.A.c.a.c	ENSGT00940000154043.A.j.b.f #17	ENSGT00950000183190.a.b.b.c.b	ENSGT00940000158633.a.d	ENSGT00390000001098.j	ENSGT00940000156811.b.c.a	ENSGT00450000040324.b.l	ENSGT00940000157207.a.a.h	ENSGT00940000159428.f.b	ENSGT00940000156902.b #11	ENSGT00940000166931.e	ENSGT00530000063497.a.a.c
Salmo	ANCESTRAL SPECIES	1										ENSGT00940000159362.d	ENSGT00390000011980.b.b.d #32	ENSGT00940000158829.e #36	ENSGT00390000004339.r	ENSGT00940000153294.e	ENSGT00940000160114.g	ENSGT00390000008565.a.p #22	ENSGT00390000013112.d #23	ENSGT00940000153601.a.a.e.b.a.e.a	ENSGT00940000156235.c.a.c	ENSGT01020000230412.A.c.a.c	ENSGT00940000154043.A.j.b.f #17	ENSGT00390000005742.x.b #20	ENSGT00950000183190.a.b.b.c.b	ENSGT00940000158633.a.d	ENSGT00390000001098.j	ENSGT00940000156811.b.c.a	ENSGT00450000040324.b.l	ENSGT00940000159428.f.b	ENSGT00940000156902.b #11	ENSGT00940000166931.e	ENSGT00530000063497.a.a.c
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000063013	ENSSSAG00000099278	ENSSSAG00000058086	ENSSSAG00000113240	ENSSSAG00000069739	ENSSSAG00000046345 #36	ENSSSAG00000099635	ENSSSAG00000102551	ENSSSAG00000120087	ENSSSAG00000104310	ENSSSAG00000119799	RL7A (ENSSSAG00000070973)	ENSSSAG00000070956	ENSSSAG00000090175	ENSSSAG00000104107	miga2 (ENSSSAG00000070899) #22	dolpp1 (ENSSSAG00000063525) #23	ENSSSAG00000070855	rapgef1b (ENSSSAG00000070639)	uck1 (ENSSSAG00000111451)	lrrc8aa (ENSSSAG00000069635) #17	ENSSSAG00000092176 #20	ENSSSAG00000069630	ENSSSAG00000069616	eeig1b (ENSSSAG00000069579)	slc25a25b (ENSSSAG00000048730)	ENSSSAG00000067604 #11	ENSSSAG00000067576	ENSSSAG00000042832 #7	ENSSSAG00000088806	set (ENSSSAG00000068418)
Northern pike	MODERN SPECIES	13	RNF122 (ENSELUG00000023451)	DUSP26 (ENSELUG00000023416)	lsm1 (ENSELUG00000023374)	ENSELUG00000023339	garnl3 (ENSELUG00000023286)	ptges (ENSELUG00000023193) #32	usp20 (ENSELUG00000023171) #36	zgc:103692 (ENSELUG00000023032) #35	med22 (ENSELUG00000032822)	rpl7a (ENSELUG00000023023)	surf1 (ENSELUG00000022990)	kyat1 (ENSELUG00000022920) #16	spout1 (ENSELUG00000022737) #15	ST6GALNAC6 (ENSELUG00000000966)	st6galnac4 (ENSELUG00000022673)	miga2 (ENSELUG00000022659) #22	dolpp1 (ENSELUG00000022586) #23	SETX (ENSELUG00000022536)	SETX (ENSELUG00000022453)	NTNG2 (ENSELUG00000022414)	rapgef1b (ENSELUG00000022368)	uck1 (ENSELUG00000030510)	dnlz (ENSELUG00000022274)	lrrc8aa (ENSELUG00000034186) #17	phyhd1 (ENSELUG00000022238) #18	dolk (ENSELUG00000022101) #19	NUP188 (ENSELUG00000022080) #20	cdk5rap2 (ENSELUG00000021996)	ENSELUG00000028060	sh3glb2b (ENSELUG00000021863) #21	PIP5KL1 (ENSELUG00000021638)
Otomorpha	ANCESTRAL SPECIES	305											ENSGT00950000182888.a.a.a.h #34	ENSGT00390000018706	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00950000183190.a.b.b	ENSGT00940000163466	ENSGT00940000167622	ENSGT00940000162727.a.b	ENSGT00390000013040
Otophysi	ANCESTRAL SPECIES	124										ENSGT00940000157310	ENSGT00950000182888.a.a.a.h #34	ENSGT00390000018706	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00950000183190.a.b.b	ENSGT00950000182975.a.a.b.l	ENSGT00940000157157.b.a.b	ENSGT00940000156880.c.a	ENSGT00940000162230
Characiphysae	ANCESTRAL SPECIES	68	ENSGT00510000048902.a.f	ENSGT00940000159721.h	ENSGT00390000015020	ENSGT00940000159585	ENSGT00950000182989.D.a.b	ENSGT01020000230351.D.a.a.a	ENSGT00940000163205.d	ENSGT00940000166931	ENSGT00940000161345	ENSGT00940000157310	ENSGT00950000182888.a.a.a.h #34	ENSGT00390000018706	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00950000183190.a.b.b	ENSGT00950000182975.a.a.b.l	ENSGT00940000157157.b.a.b	ENSGT00940000156880.c.a	ENSGT00940000162230
Channel catfish	MODERN SPECIES	9	cdk5rap2 (ENSIPUG00000005846)	gcnt4 (ENSIPUG00000005958)	gnrh2 (ENSIPUG00000005968)	ptpra (ENSIPUG00000005987)	idh3b (ENSIPUG00000006085)	p2rx4a (ENSIPUG00000006157)	gstt1b (ENSIPUG00000006312)	ddt (ENSIPUG00000006353)	CHCHD10 (ENSIPUG00000006362)	Scamp1 (ENSIPUG00000006389)	tor1 (ENSIPUG00000006420) #34	nsa2 (ENSIPUG00000006440)	spout1 (ENSIPUG00000006486) #15	st6galnac6 (ENSIPUG00000006510)	St6galnac3 (ENSIPUG00000006524)	fam73b (ENSIPUG00000006553) #22	dolpp1 (ENSIPUG00000006634) #23	setx (ENSIPUG00000006685)	NTNG2 (ENSIPUG00000006764)	rapgef1b (ENSIPUG00000006801)	uck1 (ENSIPUG00000006985)	ENSIPUG00000007004	dnlz (ENSIPUG00000007022)	Lrrc8a (ENSIPUG00000007037) #17	phyhd1 (ENSIPUG00000007062) #18	dolk (ENSIPUG00000007099) #19	NUP188 (ENSIPUG00000007115) #20	ENSIPUG00000007201	lhx5 (ENSIPUG00000007216)	mzt2 (ENSIPUG00000007238)	ENSIPUG00000007262
Characiphysae_b	ANCESTRAL SPECIES	73	ENSGT00940000159721.h	ENSGT00390000015020	ENSGT00940000159585	ENSGT00950000182989.D.a.b	ENSGT01020000230351.D.a.a.b	ENSGT01020000230351.D.a.a.a	ENSGT00940000163205.d	ENSGT00940000166931	ENSGT00940000161345	ENSGT00940000157310	ENSGT00950000182888.a.a.a.h #34	ENSGT00390000018706	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00950000183190.a.b.b	ENSGT00950000182975.a.a.b.l	ENSGT00940000157157.b.a.b	ENSGT00940000156880.c.a	ENSGT00940000162230
Characoidei	ANCESTRAL SPECIES	67	ENSGT00940000159721.h	ENSGT00390000015020	ENSGT00940000159585	ENSGT00950000182989.D.a.b	ENSGT01020000230351.D.a.a.b	ENSGT01020000230351.D.a.a.a	ENSGT00940000163205.d	ENSGT00940000166931	ENSGT00940000161345	ENSGT00940000157310	ENSGT00950000182888.a.a.a.h #34	ENSGT00390000018706	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00950000183190.a.b.b	ENSGT00950000182975.a.a.b.l	ENSGT00940000157157.b.a.b	ENSGT00940000156880.c.a	ENSGT00940000162230
Red-bellied piranha	MODERN SPECIES	625		GCNT4 (ENSPNAG00000003390)	gnrh2 (ENSPNAG00000015527)	ptpra (ENSPNAG00000016040)	idh3b (ENSPNAG00000016090)	p2rx4a (ENSPNAG00000016175)	gstt1b (ENSPNAG00000016186)	ddt (ENSPNAG00000016205)	chchd10 (ENSPNAG00000016214)	scamp1 (ENSPNAG00000016232)	tor1 (ENSPNAG00000016241) #34	nsa2 (ENSPNAG00000016263)	spout1 (ENSPNAG00000016265) #15	ST6GALNAC6 (ENSPNAG00000016281)	st6galnac4 (ENSPNAG00000016286)	miga2 (ENSPNAG00000016297) #22	dolpp1 (ENSPNAG00000005741) #23
Mexicana tetra	MODERN SPECIES	5	ptpra (ENSAMXG00000014133)	idh3b (ENSAMXG00000035220)	gstt1b (ENSAMXG00000014181)	p2rx4a (ENSAMXG00000014206)	gstt1b (ENSAMXG00000035085)	gstt1b (ENSAMXG00000033673)	ddt (ENSAMXG00000031381)	chchd10 (ENSAMXG00000014252)	scamp1 (ENSAMXG00000040128)	tor1 (ENSAMXG00000014304) #34	nsa2 (ENSAMXG00000033155)	ENSAMXG00000034097	spout1 (ENSAMXG00000014331) #15	ST6GALNAC6 (ENSAMXG00000014345)	st6galnac4 (ENSAMXG00000040179)	miga2 (ENSAMXG00000014369) #22	dolpp1 (ENSAMXG00000032913) #23	SETX (ENSAMXG00000014406)	ENSAMXG00000030011	ENSAMXG00000029525	ENSAMXG00000038676	ENSAMXG00000040804	NTNG2 (ENSAMXG00000042670)	rapgef1b (ENSAMXG00000014464)	uck1 (ENSAMXG00000014494)	dnlz (ENSAMXG00000032493)	lrrc8aa (ENSAMXG00000014522) #17	phyhd1 (ENSAMXG00000014542) #18	ENSAMXG00000040346	dolk (ENSAMXG00000026354) #19	NUP188 (ENSAMXG00000014559) #20
Electric eel	MODERN SPECIES	801				NUP188 (ENSEEEG00000006530) #20	dolk (ENSEEEG00000006527) #19	p2rx4a (ENSEEEG00000006523)	gstt1b (ENSEEEG00000006519)	ddt (ENSEEEG00000006517)	chchd10 (ENSEEEG00000006514)	scamp1 (ENSEEEG00000006511)	tor1 (ENSEEEG00000006509) #34	nsa2 (ENSEEEG00000006508)	spout1 (ENSEEEG00000006447) #15	ST6GALNAC6 (ENSEEEG00000006443)	st6galnac4 (ENSEEEG00000006441)	miga2 (ENSEEEG00000006437) #22	dolpp1 (ENSEEEG00000006435) #23
Cyprinoidei	ANCESTRAL SPECIES	102	ENSGT00950000182870.a.a.a.b.k	ENSGT01050000244887.A.b.b	ENSGT00940000154461.tc.b	ENSGT00940000154735.c	ENSGT00940000159814	ENSGT00940000153432.A.b	ENSGT00940000159872	ENSGT00390000008772	ENSGT00940000158002	ENSGT00940000157310	ENSGT00950000182888.a.a.a.h #34	ENSGT00390000018706	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00950000183190.a.b.b	ENSGT00950000182975.a.a.b.l	ENSGT00940000157157.b.a.b	ENSGT00940000156880.c.a	ENSGT00940000155199.e.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	568											ENSGT00950000182888.a.a.a.h.a.a #34	ENSGT00390000018706.i	ENSGT00390000016537.n #15	ENSGT00940000160114.i	ENSGT00940000157958.h	ENSGT00390000008565.a.q #22	ENSGT00390000013112.b #23	ENSGT00940000160918.b	ENSGT00940000153601.a.a.e.b.a.g	ENSGT00940000156235.c.a.e	ENSGT01020000230412.A.c.a.e	ENSGT00390000008220.e.b	ENSGT00940000154043.A.j.b.c.b #17	ENSGT00390000006287.m #18	ENSGT00390000004067.i #19	ENSGT00390000005742.v #20	ENSGT00950000183190.a.b.b.a	ENSGT00390000008220.e.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	13	ENSCARG00000009796	ENSCARG00000009793	ENSCARG00000009789	ENSCARG00000009785	LOXHD1 (ENSCARG00000009301)	st8sia5 (ENSCARG00000009177)	ENSCARG00000009156	hwa (ENSCARG00000009147)	ENSCARG00000009145	CTIF (ENSCARG00000009140)	smad7 (ENSCARG00000009133)	DYM (ENSCARG00000009079)	ENSCARG00000009069	ENSCARG00000008901	scamp1 (ENSCARG00000008856)	miga2 (ENSCARG00000008835) #22	dolpp1 (ENSCARG00000008803) #23	ENSCARG00000008771	ENSCARG00000008763	tor1 (ENSCARG00000008729) #34	nsa2 (ENSCARG00000008670)	spout1 (ENSCARG00000008610) #15	ST6GALNAC6 (ENSCARG00000008562)	miga2 (ENSCARG00000008549) #22	ENSCARG00000008533	COL5A1 (ENSCARG00000041897)	uck1 (ENSCARG00000041870)	dnlz (ENSCARG00000041820)	lrrc8aa (ENSCARG00000041793) #17	phyhd1 (ENSCARG00000041574) #18	dolk (ENSCARG00000041556) #19
Goldfish	MODERN SPECIES	13	ENSCARG00000009145	CTIF (ENSCARG00000009140)	smad7 (ENSCARG00000009133)	DYM (ENSCARG00000009079)	ENSCARG00000009069	ENSCARG00000008901	scamp1 (ENSCARG00000008856)	miga2 (ENSCARG00000008835) #22	dolpp1 (ENSCARG00000008803) #23	ENSCARG00000008771	ENSCARG00000008763	tor1 (ENSCARG00000008729) #34	nsa2 (ENSCARG00000008670)	spout1 (ENSCARG00000008610) #15	ST6GALNAC6 (ENSCARG00000008562)	miga2 (ENSCARG00000008549) #22	ENSCARG00000008533	COL5A1 (ENSCARG00000041897)	uck1 (ENSCARG00000041870)	dnlz (ENSCARG00000041820)	lrrc8aa (ENSCARG00000041793) #17	phyhd1 (ENSCARG00000041574) #18	dolk (ENSCARG00000041556) #19	ENSCARG00000041540	cdk9 (ENSCARG00000041466)	cdk5rap2 (ENSCARG00000041213)	ENSCARG00000041169	dolk (ENSCARG00000041164) #19	phyhd1 (ENSCARG00000041016) #18	lrrc8aa (ENSCARG00000040985) #17	dnlz (ENSCARG00000040974)
Cyprininae_a	ANCESTRAL SPECIES	240	ENSGT01050000244887.A.b.b.d	ENSGT00940000154461.tc.b.b.b	ENSGT00940000154735.c.c	ENSGT00940000159814.f	ENSGT00940000153432.A.b.f	ENSGT00940000159872.c	ENSGT00390000008772.n	ENSGT00940000158002.q	ENSGT00940000157310.e	ENSGT00950000182888.a.a.a.h.a.b.b.a #34	ENSGT00950000182888.a.a.a.h.a.b.a #34	ENSGT00390000018706.j	ENSGT00390000016537.m #15	ENSGT00940000160114.i	ENSGT00940000157958.h	ENSGT00390000008565.a.q #22	ENSGT00390000013112.b #23	ENSGT00940000160918.b	ENSGT00940000153601.a.a.e.b.a.g	ENSGT00940000156235.c.a.e	ENSGT01020000230412.A.c.a.e	ENSGT00390000008220.e.b	ENSGT00390000008220.e.a	ENSGT00940000154043.A.j.b.c.a #17	ENSGT00940000154043.A.j.b.d #17	ENSGT00390000006287.m #18	ENSGT00390000004067.i #19	ENSGT00390000005742.v #20	ENSGT00950000183190.a.b.b.a	ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.a.a.b.a.a.a	ENSGT00950000182975.a.a.b.l.f
Common carp reference	MODERN SPECIES	45	ENSCCRG00000036236	hnrnpabb (ENSCCRG00000082905)	ZBTB7C (ENSCCRG00000075877)	CTIF (ENSCCRG00000061138)	smad7 (ENSCCRG00000079215)	DYM (ENSCCRG00000079172)	ENSCCRG00000003835	scamp1 (ENSCCRG00000046834)	ENSCCRG00000044411	tor1 (ENSCCRG00000035266) #34	tor1 (ENSCCRG00000075223) #34	tor1 (ENSCCRG00000007313) #34	nsa2 (ENSCCRG00000039734)	spout1 (ENSCCRG00000028874) #15	ENSCCRG00000015671	miga2 (ENSCCRG00000048412) #22	dolpp1 (ENSCCRG00000048407) #23	SETX (ENSCCRG00000081183)	NTNG2 (ENSCCRG00000068996)	rapgef1b (ENSCCRG00000048325)	uck1 (ENSCCRG00000044796)	dnlz (ENSCCRG00000039290)	lrrc8aa (ENSCCRG00000072268) #17	phyhd1 (ENSCCRG00000067601) #18	dolk (ENSCCRG00000082757) #19	NUP188 (ENSCCRG00000040401) #20	cdk5rap2 (ENSCCRG00000000618)	ENSCCRG00000020126	ENSCCRG00000019824	ENSCCRG00000019835	ENSCCRG00000020122
Golden-line barbel	MODERN SPECIES	72	RACK1 (ENSSGRG00000047158)	hnrnpabb (ENSSGRG00000047156)	ZBTB7C (ENSSGRG00000047154)	CTIF (ENSSGRG00000047152)	ENSSGRG00000047151	smad7 (ENSSGRG00000047143)	DYM (ENSSGRG00000047140)	ATP8B1 (ENSSGRG00000046908)	scamp1 (ENSSGRG00000046903)	tor1 (ENSSGRG00000046902) #34	tor1 (ENSSGRG00000046901) #34	nsa2 (ENSSGRG00000046896)	spout1 (ENSSGRG00000046756) #15	ST6GALNAC6 (ENSSGRG00000046755)	st6galnac4 (ENSSGRG00000046753)	miga2 (ENSSGRG00000046749) #22	dolpp1 (ENSSGRG00000046707) #23	SETX (ENSSGRG00000046672)	ENSSGRG00000046669	ENSSGRG00000046668	NTNG2 (ENSSGRG00000046667)	rapgef1b (ENSSGRG00000046641)	uck1 (ENSSGRG00000046611)	dnlz (ENSSGRG00000046610)	ENSSGRG00000046608	lrrc8aa (ENSSGRG00000046607) #17	phyhd1 (ENSSGRG00000046493) #18	dolk (ENSSGRG00000046491) #19	NUP188 (ENSSGRG00000045941) #20	cdk5rap2 (ENSSGRG00000045935)	pimr128 (ENSSGRG00000045931)
Cyprininae	ANCESTRAL SPECIES	465														ENSGT00940000160114.j	ENSGT00940000157958.g	ENSGT00390000008565.a.r #22	ENSGT00390000013112.a #23	ENSGT00940000160918.a	ENSGT00940000153601.a.a.e.b.a.h	ENSGT00940000156235.c.a.f	ENSGT01020000230412.A.c.a.f	ENSGT00390000008220.f	ENSGT00940000154043.A.j.b.c.a #17	ENSGT00390000006287.n #18	ENSGT00390000004067.j #19	ENSGT00390000005742.u.a #20	ENSGT00950000183190.a.b.b.b	ENSGT00950000182975.a.a.b.l.e	ENSGT00940000157157.b.a.b.c	ENSGT00940000156880.c.a.d	ENSGT00940000162230.d
Cyprininae_a	ANCESTRAL SPECIES	227	ENSGT01050000244887.A.b.b.c	ENSGT00940000154461.tc.b.a	ENSGT00940000154735.c.d	ENSGT00940000159814.e	ENSGT00940000153432.A.b.e	ENSGT00940000159872.d	ENSGT00390000008772.m.a	ENSGT00940000158002.r	ENSGT00940000157310.f	ENSGT00950000182888.a.a.a.h.a.b.b.b #34	ENSGT00950000182888.a.a.a.h.a.a #34	ENSGT00390000018706.i	ENSGT00390000016537.n #15	ENSGT00940000160114.j	ENSGT00940000157958.g	ENSGT00390000008565.a.r #22	ENSGT00390000013112.a #23	ENSGT00940000160918.a	ENSGT00940000153601.a.a.e.b.a.h	ENSGT00940000156235.c.a.f	ENSGT01020000230412.A.c.a.f	ENSGT00940000154043.A.i #17	ENSGT00390000006287.n #18	ENSGT00390000004067.j #19	ENSGT00390000005742.u.a #20	ENSGT00950000183190.a.b.b.b	ENSGT00950000182975.a.a.b.l.e	ENSGT00940000157157.b.a.b.c	ENSGT00940000156880.c.a.d	ENSGT00940000162230.d	ENSGT00940000156997.b.c
Common carp reference	MODERN SPECIES	38	SHC3 (ENSCCRG00000041066)	S1PR3 (ENSCCRG00000070584)	ENSCCRG00000059461	ENSCCRG00000048766	hnrnpabb (ENSCCRG00000079704)	ZBTB7C (ENSCCRG00000057156)	CTIF (ENSCCRG00000071713)	smad7 (ENSCCRG00000061526)	DYM (ENSCCRG00000074126)	ENSCCRG00000003856	scamp1 (ENSCCRG00000079310)	tor1 (ENSCCRG00000055539) #34	nsa2 (ENSCCRG00000028864)	ENSCCRG00000039773	st6galnac4 (ENSCCRG00000067085)	miga2 (ENSCCRG00000037756) #22	dolpp1 (ENSCCRG00000037753) #23	ENSCCRG00000017973	NTNG2 (ENSCCRG00000062829)	uck1 (ENSCCRG00000073756)	rapgef1b (ENSCCRG00000014375)	phyhd1 (ENSCCRG00000082685) #18	dolk (ENSCCRG00000077966) #19	NUP188 (ENSCCRG00000017126) #20	cdk5rap2 (ENSCCRG00000017077)	ENSCCRG00000017073	ENSCCRG00000058198	camsap1a (ENSCCRG00000017875)	notch1a (ENSCCRG00000017890)	ENSCCRG00000035321	ENSCCRG00000079707
Golden-line barbel	MODERN SPECIES	264	RACK1 (ENSSGRG00000026628)	hnrnpabb (ENSSGRG00000026627)	ZBTB7C (ENSSGRG00000026626)	CTIF (ENSSGRG00000026625)	smad7 (ENSSGRG00000026624)	DYM (ENSSGRG00000026419)	ENSSGRG00000026308	scamp1 (ENSSGRG00000026306)	tor1 (ENSSGRG00000026304) #34	tor1 (ENSSGRG00000026302) #34	nsa2 (ENSSGRG00000026296)	spout1 (ENSSGRG00000026268) #15	ST6GALNAC6 (ENSSGRG00000026262)	st6galnac4 (ENSSGRG00000026261)	st6galnac4 (ENSSGRG00000026259)	miga2 (ENSSGRG00000026247) #22	dolpp1 (ENSSGRG00000026244) #23	ENSSGRG00000026242	NTNG2 (ENSSGRG00000026181)	rapgef1b (ENSSGRG00000026145)	uck1 (ENSSGRG00000026048)	dnlz (ENSSGRG00000026042)	ENSSGRG00000026039	ENSSGRG00000026038 #17	phyhd1 (ENSSGRG00000026030) #18	dolk (ENSSGRG00000026028) #19	ENSSGRG00000025937	cdk5rap2 (ENSSGRG00000025936)	camsap1a (ENSSGRG00000025920)	notch1a (ENSSGRG00000023297)	KCNT1 (ENSSGRG00000023227)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	40	zgc:86839 (ENSCARG00000041272)	SHC3 (ENSCARG00000041136)	S1PR3 (ENSCARG00000041118)	RACK1 (ENSCARG00000040657)	hnrnpabb (ENSCARG00000040624)	ZBTB7C (ENSCARG00000040609)	CTIF (ENSCARG00000040569)	smad7 (ENSCARG00000040507)	DYM (ENSCARG00000040337)	ATP8B1 (ENSCARG00000039939)	scamp1 (ENSCARG00000039896)	tor1 (ENSCARG00000039883) #34	nsa2 (ENSCARG00000039873)	ST6GALNAC6 (ENSCARG00000039862)	st6galnac4 (ENSCARG00000039859)	miga2 (ENSCARG00000041281) #22	dolpp1 (ENSCARG00000041252) #23	ENSCARG00000041235	NTNG2 (ENSCARG00000041225)	rapgef1b (ENSCARG00000037541)	uck1 (ENSCARG00000037311)	dnlz (ENSCARG00000037291)	lrrc8aa (ENSCARG00000037273) #17	phyhd1 (ENSCARG00000036947) #18	dolk (ENSCARG00000036924) #19	NUP188 (ENSCARG00000036053) #20	cdk5rap2 (ENSCARG00000035830)	ENSCARG00000035730	ENSCARG00000035690	ENSCARG00000035664	ENSCARG00000035630
Goldfish	MODERN SPECIES	2981														ST6GALNAC6 (ENSCARG00000070423)	st6galnac4 (ENSCARG00000070422)	miga2 (ENSCARG00000070419) #22	dolpp1 (ENSCARG00000070417) #23	ENSCARG00000070415
Zebrafish	MODERN SPECIES	13	CKS2 (ENSDARG00000117089)	ENSDARG00000116283	SHC3 (ENSDARG00000098909)	hnrnpabb (ENSDARG00000099865)	ZBTB7C (ENSDARG00000100985)	CTIF (ENSDARG00000090617)	smad7 (ENSDARG00000016858)	DYM (ENSDARG00000042555)	ATP8B1 (ENSDARG00000060980)	scamp1 (ENSDARG00000036911)	tor1 (ENSDARG00000077950) #34	nsa2 (ENSDARG00000007708)	spout1 (ENSDARG00000019707) #15	ST6GALNAC6 (ENSDARG00000036913)	st6galnac4 (ENSDARG00000100804)	miga2 (ENSDARG00000089357) #22	dolpp1 (ENSDARG00000036915) #23	ENSDARG00000022996	NTNG2 (ENSDARG00000087100)	rapgef1b (ENSDARG00000015971)	uck1 (ENSDARG00000022218)	dnlz (ENSDARG00000068655)	lrrc8aa (ENSDARG00000032188) #17	HTRA2 (ENSDARG00000094995)	ENSDARG00000114965	HTRA2 (ENSDARG00000092133)	ENSDARG00000114455	HTRA2 (ENSDARG00000094749)	ENSDARG00000110986	ENSDARG00000114913	ENSDARG00000115473
Clupeiformes	ANCESTRAL SPECIES	105											ENSGT00950000182888.a.a.a.h #34	ENSGT00390000018706	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.b.a	ENSGT00940000154079.b.b	ENSGT00940000155946.c.b	ENSGT00930000151016	ENSGT00940000154645.B.e	ENSGT00940000160451	ENSGT01060000248556.A.a.a.a.b.a #24	ENSGT00390000011500 #25	ENSGT00900000141021.b.a.d.a	ENSGT00390000008371.b #29	ENSGT00930000151050	ENSGT00930000151044	ENSGT00390000006922
Atlantic herring	MODERN SPECIES	3	nsa2 (ENSCHAG00000025862)	spout1 (ENSCHAG00000025865) #15	ENSCHAG00000025891	rpl28 (ENSCHAG00000025897)	pdcl (ENSCHAG00000025906)	rpl37 (ENSCHAG00000025911)	st8sia5 (ENSCHAG00000025920)	ENSCHAG00000025936	LOXHD1 (ENSCHAG00000025959)	zgc:77838 (ENSCHAG00000025971)	ENSCHAG00000025974	spout1 (ENSCHAG00000025977) #15	nsa2 (ENSCHAG00000025990)	tor1 (ENSCHAG00000025993) #34	ST6GALNAC6 (ENSCHAG00000025999)	miga2 (ENSCHAG00000026011) #22	dolpp1 (ENSCHAG00000026063) #23	ENSCHAG00000026067	ENSCHAG00000026083	zbtb43 (ENSCHAG00000002356)	RALGPS1 (ENSCHAG00000002473)	angptl2a (ENSCHAG00000003585)	fbxw2 (ENSCHAG00000003600)	ncs1a (ENSCHAG00000003645)	gpr107 (ENSCHAG00000003724)	crata (ENSCHAG00000003848) #24	ptpa (ENSCHAG00000004320) #25	ier5l (ENSCHAG00000004832)	ntmt1 (ENSCHAG00000004859) #29	ndor1 (ENSCHAG00000004879)	lrsam1 (ENSCHAG00000005132)
Denticle herring	MODERN SPECIES	13	haus1 (ENSDCDG00000010956)	atp5fa1 (ENSDCDG00000010991)	st8sia5 (ENSDCDG00000011738)	rpl37 (ENSDCDG00000011745)	pdcl (ENSDCDG00000011751)	rpl28 (ENSDCDG00000011753)	ENSDCDG00000011754	ENSDCDG00000011796	camsap1a (ENSDCDG00000012916)	notch1a (ENSDCDG00000012926)	tor1 (ENSDCDG00000012982) #34	nsa2 (ENSDCDG00000012992)	spout1 (ENSDCDG00000013004) #15	ST6GALNAC6 (ENSDCDG00000013067)	st6galnac4 (ENSDCDG00000013111)	miga2 (ENSDCDG00000013121) #22	dolpp1 (ENSDCDG00000013148) #23	ENSDCDG00000013160	NTNG2 (ENSDCDG00000013171)	ENSDCDG00000013183	ENSDCDG00000013188	agpat2 (ENSDCDG00000013192)	egfl7 (ENSDCDG00000013200)	ENSDCDG00000013222	ENSDCDG00000013225	psmd5 (ENSDCDG00000013227)	ENSDCDG00000013232	NUP188 (ENSDCDG00000013335) #20	dolk (ENSDCDG00000019099) #19	phyhd1 (ENSDCDG00000019101) #18	lrrc8aa (ENSDCDG00000019104) #17
Osteoglossiformes	ANCESTRAL SPECIES	65			ENSGT00940000159362.a	ENSGT00940000161643.a #31	ENSGT00390000011980.b.b #32	ENSGT00940000158829 #36	ENSGT00390000009787 #35	ENSGT00390000004339	ENSGT00940000153294.i	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797 #16	ENSGT00390000016537 #15	ENSGT00940000160114	ENSGT00940000157958	ENSGT00390000008565.a #22	ENSGT00390000013112 #23	ENSGT00940000160918	ENSGT00940000153601.a.a.e.a	ENSGT00940000156235.c.a	ENSGT01020000230412.A.c.a	ENSGT00390000008220	ENSGT00940000154043.A.j.b #17	ENSGT00390000006287 #18	ENSGT00390000004067 #19	ENSGT00390000005742 #20	ENSGT00950000183190.a.b.b	ENSGT00940000163466	ENSGT00940000162727	ENSGT00390000013040	ENSGT00940000162230
P. kingsleyae	MODERN SPECIES	88	garnl3 (ENSPKIG00000024957)	ENSPKIG00000024987	PRRX2 (ENSPKIG00000024999) #31	ptges (ENSPKIG00000025010) #32	usp20 (ENSPKIG00000025022) #36	zgc:103692 (ENSPKIG00000025036) #35	med22 (ENSPKIG00000025044)	RPL7A (ENSPKIG00000025056)	ENSPKIG00000025062	surf1 (ENSPKIG00000025075)	surf6 (ENSPKIG00000025080)	kyat1 (ENSPKIG00000025085) #16	spout1 (ENSPKIG00000025099) #15	ST6GALNAC6 (ENSPKIG00000025105)	st6galnac4 (ENSPKIG00000025112)	miga2 (ENSPKIG00000025123) #22	dolpp1 (ENSPKIG00000025145) #23	SETX (ENSPKIG00000025162)	NTNG2 (ENSPKIG00000025184)	rapgef1b (ENSPKIG00000025229)	uck1 (ENSPKIG00000025313)	dnlz (ENSPKIG00000025315)	lrrc8aa (ENSPKIG00000025321) #17	phyhd1 (ENSPKIG00000025327) #18	dolk (ENSPKIG00000025330) #19	NUP188 (ENSPKIG00000025335) #20	ENSPKIG00000025345	col27a1b (ENSPKIG00000025360)	psmd5 (ENSPKIG00000004218)	ENSPKIG00000004253	B3GALT9 (ENSPKIG00000004266)
Asian bonytongue	MODERN SPECIES	21	PRRX2 (ENSSFOG00015016927) #31	ptges (ENSSFOG00015025617) #32	usp20 (ENSSFOG00015016818) #36	zgc:103692 (ENSSFOG00015016775) #35	med22 (ENSSFOG00015024837)	RPL7A (ENSSFOG00015029564)	surf1 (ENSSFOG00015033276)	surf6 (ENSSFOG00015026175)	kyat1 (ENSSFOG00015016599) #16	kyat1 (ENSSFOG00015016570) #16	ENSSFOG00015016511	ENSSFOG00015027786	spout1 (ENSSFOG00015002867) #15	ST6GALNAC6 (ENSSFOG00015002859)	st6galnac4 (ENSSFOG00015002851)	miga2 (ENSSFOG00015002799) #22	dolpp1 (ENSSFOG00015002773) #23	SETX (ENSSFOG00015002765)	NTNG2 (ENSSFOG00015002724)	rapgef1b (ENSSFOG00015002536)	uck1 (ENSSFOG00015002485)	dnlz (ENSSFOG00015002456)	lrrc8aa (ENSSFOG00015002447) #17	phyhd1 (ENSSFOG00015002401) #18	dolk (ENSSFOG00015002380) #19	NUP188 (ENSSFOG00015002217) #20	cdk5rap2 (ENSSFOG00015027218)	ENSSFOG00015026061	psmd5 (ENSSFOG00015001808)	B3GALT9 (ENSSFOG00015001800)	KCNT1 (ENSSFOG00015001645)
Spotted gar	MODERN SPECIES	660	zgc:63972 (ENSLOCG00000003901)	dab2ipb (ENSLOCG00000003915)	ttll11 (ENSLOCG00000003942)	ENSLOCG00000003958	garnl3 (ENSLOCG00000003976)	prrx2 (ENSLOCG00000003997) #31	ptges (ENSLOCG00000004008) #32	usp20 (ENSLOCG00000004021) #36	zgc:103692 (ENSLOCG00000004043) #35	surf1 (ENSLOCG00000004058)	surf6 (ENSLOCG00000004072)	kyat1 (ENSLOCG00000004106) #16	spout1 (ENSLOCG00000004143) #15	endog (ENSLOCG00000004163) #14	GBGT1 (ENSLOCG00000004182)	miga2 (ENSLOCG00000004191) #22	ST6GALNAC6 (ENSLOCG00000004212)	st6galnac4 (ENSLOCG00000004230)	dolpp1 (ENSLOCG00000004245) #23	SETX (ENSLOCG00000004264)	NTNG2 (ENSLOCG00000004285)	med27 (ENSLOCG00000004302)	rapgef1b (ENSLOCG00000004322)	NUP188 (ENSLOCG00000004351) #20	dolk (ENSLOCG00000017343) #19	phyhd1 (ENSLOCG00000004384) #18	lrrc8aa (ENSLOCG00000004397) #17	entr1 (ENSLOCG00000004408)	snapc4 (ENSLOCG00000004423)	CARD9 (ENSLOCG00000004437)	dnlz (ENSLOCG00000004465)
Reedfish	MODERN SPECIES	17	ENSECRG00000019331	garnl3 (ENSECRG00000019425)	ptges (ENSECRG00000019763) ##32	usp20 (ENSECRG00000019780) #36	zgc:103692 (ENSECRG00000019825) #35	med22 (ENSECRG00000019842)	RPL7A (ENSECRG00000019858)	surf1 (ENSECRG00000019901)	surf6 (ENSECRG00000019939)	kyat1 (ENSECRG00000019968) #16	spout1 (ENSECRG00000020020) #15	endog (ENSECRG00000020066) #14	gbgt1l2 (ENSECRG00000020083)	ST6GALNAC6 (ENSECRG00000020146)	st6galnac4 (ENSECRG00000020833)	miga2 (ENSECRG00000020852) #22	dolpp1 (ENSECRG00000020876) #23	SETX (ENSECRG00000020906)	NTNG2 (ENSECRG00000020943)	med27 (ENSECRG00000020964)	rapgef1b (ENSECRG00000020999)	NUP188 (ENSECRG00000021058) #20	dolk (ENSECRG00000021097) #19	phyhd1 (ENSECRG00000021107) #18	lrrc8aa (ENSECRG00000014123) #17	ENSECRG00000014156	CARD9 (ENSECRG00000014211)	DNLZ (ENSECRG00000014290)	ENSECRG00000014321	VAV2 (ENSECRG00000014426)	ENSECRG00000014601
Elephant shark	MODERN SPECIES	1585	ak1 (ENSCMIG00000014354)	ass1 (ENSCMIG00000014371)	fubp3 (ENSCMIG00000014403)	ENSCMIG00000014410	ncs1b (ENSCMIG00000014411)	gpr107 (ENSCMIG00000014415)	fnbp1a (ENSCMIG00000014437) #37	SH2D3C (ENSCMIG00000014516)	cdk9 (ENSCMIG00000014543)	fpgs (ENSCMIG00000014545)	ENSCMIG00000014549	CEL (ENSCMIG00000014573)	GTF3C5 (ENSCMIG00000014592)	tsc1a (ENSCMIG00000014598)	GFI1B (ENSCMIG00000014600)	miga2 (ENSCMIG00000014604) #22	dolpp1 (ENSCMIG00000014608) #23	crata (ENSCMIG00000014615) #24	ptpa (ENSCMIG00000014698) #25	asb6 (ENSCMIG00000014721) #30	ntmt1 (ENSCMIG00000014723) #29	PRRX2 (ENSCMIG00000014727) #31	CARD9 (ENSCMIG00000014729)	ENSCMIG00000014731	ENSCMIG00000014732	ENSCMIG00000014736	ENSCMIG00000014740	pmpca (ENSCMIG00000014756)	inpp5e (ENSCMIG00000014781)	SEC16A (ENSCMIG00000014798)	notch1a (ENSCMIG00000000648)