Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00390000007227.b #9	ENSGT00960000189525	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT01090000261752	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT01090000261752	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT01090000261752	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Glires	ANCESTRAL SPECIES	21	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT01090000261752	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Hystricomorpha	ANCESTRAL SPECIES	47	ENSGT01050000244941.B.c #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Hystricomorpha_a	ANCESTRAL SPECIES	55	ENSGT01050000244941.B.c #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Hystricomorpha_b	ANCESTRAL SPECIES	66	ENSGT01050000244941.B.c #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Long-tailed chinchilla	MODERN SPECIES	231	LPAR2 (ENSCLAG00000016969) #7	CILP2 (ENSCLAG00000015928) #8	YJEFN3 (ENSCLAG00000016158) #9	NDUFA13 (ENSCLAG00000016915) #10	TSSK6 (ENSCLAG00000018107) #11	GATAD2A (ENSCLAG00000010160) #12	MAU2 (ENSCLAG00000006535) #13	SUGP1 (ENSCLAG00000003512) #14	TM6SF2 (ENSCLAG00000003633) #15	HAPLN4 (ENSCLAG00000003955) #16	NCAN (ENSCLAG00000004140) #17	NR2C2AP (ENSCLAG00000004378) #18	RFXANK (ENSCLAG00000004632) #19	BORCS8 (ENSCLAG00000004959) #20	MEF2B (ENSCLAG00000007377) #21	TMEM161A (ENSCLAG00000007578) #22	SLC25A42 (ENSCLAG00000008004) #23	ARMC6 (ENSCLAG00000008215) #24	SUGP2 (ENSCLAG00000011375) #25	HOMER3 (ENSCLAG00000011599) #26	DDX49 (ENSCLAG00000012844) #27	COPE (ENSCLAG00000003621) #28	CERS1 (ENSCLAG00000003897) #29	UPF1 (ENSCLAG00000004037) #31	COMP (ENSCLAG00000005109) #32	CRTC1 (ENSCLAG00000005682) #33	KLHL26 (ENSCLAG00000006029) #34	TMEM59L (ENSCLAG00000006357) #35	CRLF1 (ENSCLAG00000006697) #36	ENSCLAG00000007191 #37	UBA52 (ENSCLAG00000005686)
Degu	MODERN SPECIES	323	LPAR2 (ENSODEG00000010920) #7	CILP2 (ENSODEG00000010764) #8	YJEFN3 (ENSODEG00000011107) #9	NDUFA13 (ENSODEG00000013435) #10	TSSK6 (ENSODEG00000020032) #11	GATAD2A (ENSODEG00000013506) #12	MAU2 (ENSODEG00000012887) #13	SUGP1 (ENSODEG00000011538) #14	TM6SF2 (ENSODEG00000010936) #15	HAPLN4 (ENSODEG00000011689) #16	NCAN (ENSODEG00000011699) #17	NR2C2AP (ENSODEG00000011486) #18	RFXANK (ENSODEG00000013006) #19	BORCS8 (ENSODEG00000013003) #20	MEF2B (ENSODEG00000012357) #21	TMEM161A (ENSODEG00000012343) #22	SLC25A42 (ENSODEG00000012168) #23	ARMC6 (ENSODEG00000012613) #24	SUGP2 (ENSODEG00000012058) #25	HOMER3 (ENSODEG00000014870) #26	DDX49 (ENSODEG00000011203) #27	COPE (ENSODEG00000011547) #28	CERS1 (ENSODEG00000011214) #29	GDF1 (ENSODEG00000011857) #30	UPF1 (ENSODEG00000012426) #31	COMP (ENSODEG00000015412) #32	CRTC1 (ENSODEG00000011739) #33	KLHL26 (ENSODEG00000012544) #34	TMEM59L (ENSODEG00000012052) #35	CRLF1 (ENSODEG00000012883) #36	REX1BD (ENSODEG00000013625) #37
Guinea pig	MODERN SPECIES	72	GMIP (ENSCPOG00000011161)	LPAR2 (ENSCPOG00000012652) #7	CILP2 (ENSCPOG00000007219) #8	YJEFN3 (ENSCPOG00000023842) #9	NDUFA13 (ENSCPOG00000019995) #10	TSSK6 (ENSCPOG00000024320) #11	GATAD2A (ENSCPOG00000015396) #12	MAU2 (ENSCPOG00000003755) #13	SUGP1 (ENSCPOG00000007797) #14	TM6SF2 (ENSCPOG00000022916) #15	HAPLN4 (ENSCPOG00000023683) #16	NR2C2AP (ENSCPOG00000032927) #18	RFXANK (ENSCPOG00000003121) #19	BORCS8 (ENSCPOG00000036178) #20	MEF2B (ENSCPOG00000032781) #21	TMEM161A (ENSCPOG00000013640) #22	SLC25A42 (ENSCPOG00000013086) #23	ARMC6 (ENSCPOG00000006374) #24	SUGP2 (ENSCPOG00000006372) #25	HOMER3 (ENSCPOG00000004565) #26	DDX49 (ENSCPOG00000013626) #27	COPE (ENSCPOG00000013624) #28	CERS1 (ENSCPOG00000033783) #29	GDF1 (ENSCPOG00000031791) #30	UPF1 (ENSCPOG00000025463) #31	COMP (ENSCPOG00000025029) #32	CRTC1 (ENSCPOG00000034343) #33	KLHL26 (ENSCPOG00000020718) #34	TMEM59L (ENSCPOG00000021490) #35	CRLF1 (ENSCPOG00000021160) #36	UBA52 (ENSCPOG00000025880)
Naked mole-rat female	MODERN SPECIES	21	YJEFN3 (ENSHGLG00000019524) #9	NDUFA13 (ENSHGLG00000018628) #10	TSSK6 (ENSHGLG00000020778) #11	GATAD2A (ENSHGLG00000003176) #12	ENSHGLG00000049094 #13	ENSHGLG00000048186 #14	ENSHGLG00000039617 #25	ENSHGLG00000042474 #14	TM6SF2 (ENSHGLG00000004113) #15	HAPLN4 (ENSHGLG00000003896) #16	NCAN (ENSHGLG00000034381) #17	NR2C2AP (ENSHGLG00000033726) #18	RFXANK (ENSHGLG00000003396) #19	MEF2BNB (ENSHGLG00000047513) #20	ENSHGLG00000003123 #21	TMEM161A (ENSHGLG00000009517) #22	SLC25A42 (ENSHGLG00000008826) #23	ARMC6 (ENSHGLG00000008147) #24	HOMER3 (ENSHGLG00000006851) #26	ENSHGLG00000006789 #27	COPE (ENSHGLG00000006648) #28	CERS1 (ENSHGLG00000013716) #29	GDF1 (ENSHGLG00000042377) #30	UPF1 (ENSHGLG00000010900) #31	COMP (ENSHGLG00000009575) #32	ENSHGLG00000041161 #34	TMEM59L (ENSHGLG00000035873) #35	CRLF1 (ENSHGLG00000006747) #36	REX1BD (ENSHGLG00000018788) #37	UBA52 (ENSHGLG00000019381)	KXD1 (ENSHGLG00000044958)
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Marmotini	ANCESTRAL SPECIES	12	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Alpin marmot	MODERN SPECIES	24	PBX4 (ENSMMMG00000003652)	CILP2 (ENSMMMG00000003635) #8	YJEFN3 (ENSMMMG00000003614) #9	NDUFA13 (ENSMMMG00000003609) #10	TSSK6 (ENSMMMG00000003603) #11	GATAD2A (ENSMMMG00000003539) #12	MAU2 (ENSMMMG00000003432) #13	SUGP1 (ENSMMMG00000003416) #14	TM6SF2 (ENSMMMG00000003397) #15	HAPLN4 (ENSMMMG00000003386) #16	NCAN (ENSMMMG00000003066) #17	NR2C2AP (ENSMMMG00000003044) #18	RFXANK (ENSMMMG00000003029) #19	BORCS8 (ENSMMMG00000003015) #20	MEF2B (ENSMMMG00000002982) #21	TMEM161A (ENSMMMG00000002937) #22	SLC25A42 (ENSMMMG00000002914) #23	ARMC6 (ENSMMMG00000002877) #24	SUGP2 (ENSMMMG00000002743) #25	HOMER3 (ENSMMMG00000002691) #26	DDX49 (ENSMMMG00000002658) #27	COPE (ENSMMMG00000002634) #28	CERS1 (ENSMMMG00000002619) #29	UPF1 (ENSMMMG00000001874) #31	COMP (ENSMMMG00000001807) #32	CRTC1 (ENSMMMG00000001771) #33	ENSMMMG00000001749 #34	CRLF1 (ENSMMMG00000001730) #36	REX1BD (ENSMMMG00000001721) #37	ENSMMMG00000001669	FKBP8 (ENSMMMG00000001633)
Marmotini_b	ANCESTRAL SPECIES	12	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Arctic ground squirrel	MODERN SPECIES	73	LPAR2 (ENSUPAG00010017989) #7	PBX4 (ENSUPAG00010017995)	CILP2 (ENSUPAG00010018008) #8	YJEFN3 (ENSUPAG00010018017) #9	TSSK6 (ENSUPAG00010018027) #11	GATAD2A (ENSUPAG00010018036) #12	MAU2 (ENSUPAG00010018075) #13	SUGP1 (ENSUPAG00010018104) #14	TM6SF2 (ENSUPAG00010018116) #15	HAPLN4 (ENSUPAG00010018121) #16	NCAN (ENSUPAG00010018127) #17	NR2C2AP (ENSUPAG00010018146) #18	RFXANK (ENSUPAG00010018152) #19	BORCS8 (ENSUPAG00010018165) #20	MEF2B (ENSUPAG00010018172) #21	TMEM161A (ENSUPAG00010018179) #22	SLC25A42 (ENSUPAG00010018191) #23	ARMC6 (ENSUPAG00010018208) #24	SUGP2 (ENSUPAG00010018216) #25	HOMER3 (ENSUPAG00010018230) #26	DDX49 (ENSUPAG00010018246) #27	COPE (ENSUPAG00010018276) #28	CERS1 (ENSUPAG00010018294) #29	GDF1 (ENSUPAG00010018300) #30	UPF1 (ENSUPAG00010018302) #31	COMP (ENSUPAG00010018331) #32	CRTC1 (ENSUPAG00010018349) #33	KLHL26 (ENSUPAG00010018384) #34	TMEM59L (ENSUPAG00010018396) #35	CRLF1 (ENSUPAG00010018403) #36	REX1BD (ENSUPAG00010018419) #37
Squirrel	MODERN SPECIES	196	ENSSTOG00000019762	CILP2 (ENSSTOG00000026823) #8	YJEFN3 (ENSSTOG00000023979) #9	NDUFA13 (ENSSTOG00000022888) #10	TSSK6 (ENSSTOG00000021351) #11	GATAD2A (ENSSTOG00000022640) #12	MAU2 (ENSSTOG00000001026) #13	SUGP1 (ENSSTOG00000001020) #14	TM6SF2 (ENSSTOG00000025054) #15	HAPLN4 (ENSSTOG00000007240) #16	NCAN (ENSSTOG00000001012) #17	NR2C2AP (ENSSTOG00000001006) #18	RFXANK (ENSSTOG00000024080) #19	BORCS8 (ENSSTOG00000025422) #20	MEF2B (ENSSTOG00000005895) #21	TMEM161A (ENSSTOG00000005867) #22	SLC25A42 (ENSSTOG00000022047) #23	ARMC6 (ENSSTOG00000012997) #24	SUGP2 (ENSSTOG00000026887) #25	HOMER3 (ENSSTOG00000029095) #26	DDX49 (ENSSTOG00000006749) #27	COPE (ENSSTOG00000006736) #28	CERS1 (ENSSTOG00000029010) #29	GDF1 (ENSSTOG00000020887) #30	UPF1 (ENSSTOG00000009196) #31	COMP (ENSSTOG00000026172) #32	CRTC1 (ENSSTOG00000022992) #33	KLHL26 (ENSSTOG00000026260) #34	TMEM59L (ENSSTOG00000013508) #35	CRLF1 (ENSSTOG00000004708) #36	REX1BD (ENSSTOG00000004692) #37
Eurasian red squirrel	MODERN SPECIES	7	CILP2 (ENSSVLG00005018243) #8	YJEFN3 (ENSSVLG00005018175) #9	NDUFA13 (ENSSVLG00005018132) #10	TSSK6 (ENSSVLG00005018119) #11	GATAD2A (ENSSVLG00005018054) #12	MAU2 (ENSSVLG00005017993) #13	SUGP1 (ENSSVLG00005017843) #14	TM6SF2 (ENSSVLG00005017792) #15	HAPLN4 (ENSSVLG00005017756) #16	ENSSVLG00005017692	NCAN (ENSSVLG00005017503) #17	NR2C2AP (ENSSVLG00005017403) #18	RFXANK (ENSSVLG00005017362) #19	BORCS8 (ENSSVLG00005017305) #20	MEF2B (ENSSVLG00005017215) #21	TMEM161A (ENSSVLG00005017057) #22	SLC25A42 (ENSSVLG00005017005) #23	ARMC6 (ENSSVLG00005016951) #24	SUGP2 (ENSSVLG00005016823) #25	HOMER3 (ENSSVLG00005016701) #26	DDX49 (ENSSVLG00005016654) #27	COPE (ENSSVLG00005016567) #28	CERS1 (ENSSVLG00005016494) #29	UPF1 (ENSSVLG00005016436) #31	COMP (ENSSVLG00005016356) #32	CRTC1 (ENSSVLG00005016088) #33	KLHL26 (ENSSVLG00005015974) #34	TMEM59L (ENSSVLG00005015929) #35	CRLF1 (ENSSVLG00005015862) #36	REX1BD (ENSSVLG00005015816) #37	UBA52 (ENSSVLG00005025643)
Rodentia_B	ANCESTRAL SPECIES	37	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Kangaroo rat	MODERN SPECIES	427	ENSDORG00000027508	ENSDORG00000012240	Atp13a1 (ENSDORG00000005185)	Gmip (ENSDORG00000005179)	Lpar2 (ENSDORG00000023437) #7	Tssk6 (ENSDORG00000008538) #11	Gatad2a (ENSDORG00000008536) #12	Mau2 (ENSDORG00000004918) #13	ENSDORG00000024315 #14	Tm6sf2 (ENSDORG00000004913) #15	Hapln4 (ENSDORG00000004912) #16	Nr2c2ap (ENSDORG00000001440) #18	Rfxank (ENSDORG00000001449) #19	Borcs8 (ENSDORG00000027906) #20	ENSDORG00000011003 #21	ENSDORG00000010999 #22	Slc25a42 (ENSDORG00000010998) #23	ENSDORG00000004418 #24	Sugp2 (ENSDORG00000011519) #25	ENSDORG00000004302 #26	Ddx49 (ENSDORG00000004301) #27	Cope (ENSDORG00000004298) #28	ENSDORG00000023557 #29	Upf1 (ENSDORG00000009984) #31	Comp (ENSDORG00000027719) #32	Crtc1 (ENSDORG00000026183) #33	Klhl26 (ENSDORG00000000436) #34	Tmem59l (ENSDORG00000024894) #35	Gm11808 (ENSDORG00000026093)	ENSDORG00000025514	Fkbp8 (ENSDORG00000010135)
Myomorpha	ANCESTRAL SPECIES	43	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Muroidea	ANCESTRAL SPECIES	47	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Muroidea_A	ANCESTRAL SPECIES	28	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Cricetidae	ANCESTRAL SPECIES	30	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Cricetinae	ANCESTRAL SPECIES	36	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Chinese hamster chok1gshd	MODERN SPECIES	184	Pbx4 (ENSCGRG00001014693)	Cilp2 (ENSCGRG00001007338) #8	Yjefn3 (ENSCGRG00001023789) #9	Ndufa13 (ENSCGRG00001022785) #10	Tssk6 (ENSCGRG00001010147) #11	Gatad2a (ENSCGRG00001018413) #12	Mau2 (ENSCGRG00001009180) #13	Sugp1 (ENSCGRG00001021250) #14	Tm6sf2 (ENSCGRG00001019424) #15	Hapln4 (ENSCGRG00001018509) #16	Ncan (ENSCGRG00001015055) #17	Nr2c2ap (ENSCGRG00001011302) #18	Rfxank (ENSCGRG00001000782) #19	Borcs8 (ENSCGRG00001020163) #20	Mef2b (ENSCGRG00001014460) #21	Tmem161a (ENSCGRG00001022808) #22	Slc25a42 (ENSCGRG00001022045) #23	Armc6 (ENSCGRG00001019296) #24	Sugp2 (ENSCGRG00001018264) #25	Homer3 (ENSCGRG00001014952) #26	Ddx49 (ENSCGRG00001009467) #27	COPE (ENSCGRG00001024248) #28	ENSCGRG00001019774 #29	ENSCGRG00001006921 #30	Upf1 (ENSCGRG00001021067) #31	Comp (ENSCGRG00001009171) #32	Crtc1 (ENSCGRG00001002202) #33	Klhl26 (ENSCGRG00001020014) #34	Tmem59l (ENSCGRG00001018799) #35	Crlf1 (ENSCGRG00001017905) #36	Rex1bd (ENSCGRG00001023832) #37
Golden Hamster	MODERN SPECIES	831	Pbx4 (ENSMAUG00000000855)	Cilp2 (ENSMAUG00000005034) #8	Yjefn3 (ENSMAUG00000021666) #9	Ndufa13 (ENSMAUG00000019158) #10	Tssk6 (ENSMAUG00000008397) #11	Gatad2a (ENSMAUG00000021128) #12	Mau2 (ENSMAUG00000021335) #13	Sugp1 (ENSMAUG00000016683) #14	Tm6sf2 (ENSMAUG00000001556) #15	Hapln4 (ENSMAUG00000011983) #16	Ncan (ENSMAUG00000007276) #17	Nr2c2ap (ENSMAUG00000003921) #18	Rfxank (ENSMAUG00000002477) #19	Borcs8 (ENSMAUG00000014785) #20	Mef2b (ENSMAUG00000006774) #21	Tmem161a (ENSMAUG00000011694) #22	Slc25a42 (ENSMAUG00000018082) #23	Armc6 (ENSMAUG00000011324) #24	Sugp2 (ENSMAUG00000011371) #25	Homer3 (ENSMAUG00000014150) #26	Ddx49 (ENSMAUG00000010235) #27	Cope (ENSMAUG00000016322) #28	ENSMAUG00000011350 #29	ENSMAUG00000012872 #30	Upf1 (ENSMAUG00000011398) #31	Comp (ENSMAUG00000010602) #32	Crtc1 (ENSMAUG00000019225) #33	Klhl26 (ENSMAUG00000021352) #34	Tmem59l (ENSMAUG00000006146) #35	Crlf1 (ENSMAUG00000021052) #36	Rex1bd (ENSMAUG00000015830) #37
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Northern American deer mouse	MODERN SPECIES	8	Pbx4 (ENSPEMG00000010841)	Cilp2 (ENSPEMG00000008010) #8	Yjefn3 (ENSPEMG00000011764) #9	Ndufa13 (ENSPEMG00000007743) #10	Tssk6 (ENSPEMG00000007183) #11	Gatad2a (ENSPEMG00000012515) #12	Mau2 (ENSPEMG00000016559) #13	Sugp1 (ENSPEMG00000009253) #14	Tm6sf2 (ENSPEMG00000016397) #15	Hapln4 (ENSPEMG00000029211) #16	Ncan (ENSPEMG00000012564) #17	Nr2c2ap (ENSPEMG00000001962) #18	Rfxank (ENSPEMG00000007761) #19	Borcs8 (ENSPEMG00000010340) #20	Mef2b (ENSPEMG00000018054) #21	Tmem161a (ENSPEMG00000016451) #22	Slc25a42 (ENSPEMG00000011354) #23	Armc6 (ENSPEMG00000012468) #24	Sugp2 (ENSPEMG00000009700) #25	Homer3 (ENSPEMG00000016382) #26	Ddx49 (ENSPEMG00000009238) #27	Cope (ENSPEMG00000018557) #28	ENSPEMG00000012430 #29	ENSPEMG00000029913 #30	Upf1 (ENSPEMG00000001085) #31	Comp (ENSPEMG00000019103) #32	Crtc1 (ENSPEMG00000005110) #33	Klhl26 (ENSPEMG00000016863) #34	Tmem59l (ENSPEMG00000014170) #35	Crlf1 (ENSPEMG00000010464) #36	Rex1bd (ENSPEMG00000017857) #37
Prairie vole	MODERN SPECIES	164	Pbx4 (ENSMOCG00000001326)	Cilp2 (ENSMOCG00000018051) #8	Yjefn3 (ENSMOCG00000019664) #9	Ndufa13 (ENSMOCG00000015070) #10	Tssk6 (ENSMOCG00000007466) #11	Gatad2a (ENSMOCG00000001060) #12	Mau2 (ENSMOCG00000003213) #13	Sugp1 (ENSMOCG00000014670) #14	Tm6sf2 (ENSMOCG00000018885) #15	Hapln4 (ENSMOCG00000000353) #16	Ncan (ENSMOCG00000020207) #17	Nr2c2ap (ENSMOCG00000003423) #18	Rfxank (ENSMOCG00000021751) #19	ENSMOCG00000008996 #20	Mef2b (ENSMOCG00000000308) #21	Tmem161a (ENSMOCG00000018852) #22	Slc25a42 (ENSMOCG00000012570) #23	Armc6 (ENSMOCG00000014288) #24	Sugp2 (ENSMOCG00000009704) #25	Homer3 (ENSMOCG00000013590) #26	Ddx49 (ENSMOCG00000018690) #27	Cope (ENSMOCG00000014940) #28	ENSMOCG00000004861 #29	ENSMOCG00000000275 #30	Upf1 (ENSMOCG00000005699) #31	Comp (ENSMOCG00000004567) #32	Crtc1 (ENSMOCG00000005553) #33	Klhl26 (ENSMOCG00000017635) #34	Tmem59l (ENSMOCG00000010649) #35	Crlf1 (ENSMOCG00000007746) #36	Rex1bd (ENSMOCG00000014306) #37
Murinae	ANCESTRAL SPECIES	23	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Mus	ANCESTRAL SPECIES	6	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Steppe mouse	MODERN SPECIES	2734	Pbx4 (ENSMSIG00000032030)	Cilp2 (ENSMSIG00000032031) #8	Yjefn3 (ENSMSIG00000032032) #9	Ndufa13 (ENSMSIG00000032033) #10	Tssk6 (ENSMSIG00000032034) #11	Gatad2a (ENSMSIG00000032035) #12	Mau2 (ENSMSIG00000032036) #13	Sugp1 (ENSMSIG00000032037) #14	Tm6sf2 (ENSMSIG00000032038) #15	Hapln4 (ENSMSIG00000032039) #16	Ncan (ENSMSIG00000032040) #17	Nr2c2ap (ENSMSIG00000032043) #18	Rfxank (ENSMSIG00000032044) #19	Borcs8 (ENSMSIG00000032045) #20	ENSMSIG00000032046 #21	Tmem161a (ENSMSIG00000032047) #22	Slc25a42 (ENSMSIG00000032048) #23	Armc6 (ENSMSIG00000032049) #24	Sugp2 (ENSMSIG00000032050) #25	Homer3 (ENSMSIG00000032051) #26	Ddx49 (ENSMSIG00000032052) #27	Cope (ENSMSIG00000032053) #28	ENSMSIG00000032054 #29	ENSMSIG00000032055 #30	Upf1 (ENSMSIG00000032056) #31	Comp (ENSMSIG00000032057) #32	Crtc1 (ENSMSIG00000032058) #33	Klhl26 (ENSMSIG00000032059) #34	Tmem59l (ENSMSIG00000032060) #35	Crlf1 (ENSMSIG00000032061) #36	ENSMSIG00000032062 #37
spretus	MODERN SPECIES	17	Pbx4 (MGP_SPRETEiJ_G0032237)	Cilp2 (MGP_SPRETEiJ_G0032238) #8	Yjefn3 (MGP_SPRETEiJ_G0032239) #9	Ndufa13 (MGP_SPRETEiJ_G0032240) #10	Tssk6 (MGP_SPRETEiJ_G0032241) #11	Gatad2a (MGP_SPRETEiJ_G0032242) #12	Mau2 (MGP_SPRETEiJ_G0032243) #13	Sugp1 (MGP_SPRETEiJ_G0032244) #14	Tm6sf2 (MGP_SPRETEiJ_G0032245) #15	Hapln4 (MGP_SPRETEiJ_G0032246) #16	Ncan (MGP_SPRETEiJ_G0032247) #17	Rfxank (MGP_SPRETEiJ_G0032248) #19	Nr2c2ap (MGP_SPRETEiJ_G0032249) #18	MGP_SPRETEiJ_G0032250 #21	MGP_SPRETEiJ_G0032251 #21	Tmem161a (MGP_SPRETEiJ_G0032252) #22	Slc25a42 (MGP_SPRETEiJ_G0032253) #23	Armc6 (MGP_SPRETEiJ_G0032254) #24	Sugp2 (MGP_SPRETEiJ_G0032255) #25	Homer3 (MGP_SPRETEiJ_G0032256) #26	Ddx49 (MGP_SPRETEiJ_G0032257) #27	Cope (MGP_SPRETEiJ_G0032258) #28	MGP_SPRETEiJ_G0032259 #30	Upf1 (MGP_SPRETEiJ_G0032260) #31	Comp (MGP_SPRETEiJ_G0032261) #32	Crtc1 (MGP_SPRETEiJ_G0032262) #33	Klhl26 (MGP_SPRETEiJ_G0032263) #34	Tmem59l (MGP_SPRETEiJ_G0032264) #35	Crlf1 (MGP_SPRETEiJ_G0032265) #36	Rex1bd (MGP_SPRETEiJ_G0032266) #37	MGP_SPRETEiJ_G0032267
Mouse	MODERN SPECIES	17	Pbx4 (ENSMUSG00000031860)	Cilp2 (ENSMUSG00000044006) #8	Yjefn3 (ENSMUSG00000048967) #9	Ndufa13 (ENSMUSG00000036199) #10	Tssk6 (ENSMUSG00000047654) #11	Gatad2a (ENSMUSG00000036180) #12	Mau2 (ENSMUSG00000031858) #13	Sugp1 (ENSMUSG00000011306) #14	Tm6sf2 (ENSMUSG00000036151) #15	Hapln4 (ENSMUSG00000007594) #16	Ncan (ENSMUSG00000002341) #17	Rfxank (ENSMUSG00000036120) #19	Nr2c2ap (ENSMUSG00000071078) #18	Borcs8 (ENSMUSG00000002345) #20	Mef2b (ENSMUSG00000079033) #21	Tmem161a (ENSMUSG00000002342) #22	Slc25a42 (ENSMUSG00000002346) #23	Armc6 (ENSMUSG00000002343) #24	Sugp2 (ENSMUSG00000036054) #25	Homer3 (ENSMUSG00000003573) #26	Ddx49 (ENSMUSG00000057788) #27	Cope (ENSMUSG00000055681) #28	Cers1 (ENSMUSG00000087408) #30	Gdf1 (ENSMUSG00000109523) #30	Upf1 (ENSMUSG00000058301) #31	Comp (ENSMUSG00000031849) #32	Crtc1 (ENSMUSG00000003575) #33	Klhl26 (ENSMUSG00000055707) #34	Tmem59l (ENSMUSG00000035964) #35	Crlf1 (ENSMUSG00000007888) #36	Rex1bd (ENSMUSG00000058833) #37
Ryukyu mouse	MODERN SPECIES	17	Pbx4 (MGP_CAROLIEiJ_G0031119)	Cilp2 (MGP_CAROLIEiJ_G0031120) #8	Yjefn3 (MGP_CAROLIEiJ_G0031121) #9	Ndufa13 (MGP_CAROLIEiJ_G0031122) #10	Tssk6 (MGP_CAROLIEiJ_G0031123) #11	Gatad2a (MGP_CAROLIEiJ_G0031124) #12	Mau2 (MGP_CAROLIEiJ_G0031125) #13	Sugp1 (MGP_CAROLIEiJ_G0031126) #14	Tm6sf2 (MGP_CAROLIEiJ_G0031127) #15	Hapln4 (MGP_CAROLIEiJ_G0031128) #16	Ncan (MGP_CAROLIEiJ_G0031129) #17	Rfxank (MGP_CAROLIEiJ_G0031130) #19	Nr2c2ap (MGP_CAROLIEiJ_G0031131) #18	MGP_CAROLIEiJ_G0031132 #21	MGP_CAROLIEiJ_G0031133 #21	Tmem161a (MGP_CAROLIEiJ_G0031134) #22	Slc25a42 (MGP_CAROLIEiJ_G0031135) #23	Armc6 (MGP_CAROLIEiJ_G0031136) #24	Sugp2 (MGP_CAROLIEiJ_G0031137) #25	Homer3 (MGP_CAROLIEiJ_G0031138) #26	Ddx49 (MGP_CAROLIEiJ_G0031139) #27	Cope (MGP_CAROLIEiJ_G0031140) #28	MGP_CAROLIEiJ_G0031141 #30	Upf1 (MGP_CAROLIEiJ_G0031142) #31	Comp (MGP_CAROLIEiJ_G0031143) #32	Crtc1 (MGP_CAROLIEiJ_G0031144) #33	Klhl26 (MGP_CAROLIEiJ_G0031145) #34	Tmem59l (MGP_CAROLIEiJ_G0031146) #35	Crlf1 (MGP_CAROLIEiJ_G0031147) #36	Rex1bd (MGP_CAROLIEiJ_G0031148) #37	MGP_CAROLIEiJ_G0031149
Shrew mouse	MODERN SPECIES	10	Pbx4 (MGP_PahariEiJ_G0021584)	Cilp2 (MGP_PahariEiJ_G0021585) #8	Yjefn3 (MGP_PahariEiJ_G0021586) #9	Ndufa13 (MGP_PahariEiJ_G0021587) #10	Tssk6 (MGP_PahariEiJ_G0021588) #11	Gatad2a (MGP_PahariEiJ_G0021589) #12	Mau2 (MGP_PahariEiJ_G0021590) #13	Sugp1 (MGP_PahariEiJ_G0021591) #14	Tm6sf2 (MGP_PahariEiJ_G0021592) #15	Hapln4 (MGP_PahariEiJ_G0021593) #16	Ncan (MGP_PahariEiJ_G0021594) #17	Rfxank (MGP_PahariEiJ_G0021595) #19	Nr2c2ap (MGP_PahariEiJ_G0021596) #18	MGP_PahariEiJ_G0021597 #21	MGP_PahariEiJ_G0021598 #21	Tmem161a (MGP_PahariEiJ_G0021599) #22	Slc25a42 (MGP_PahariEiJ_G0021600) #23	Armc6 (MGP_PahariEiJ_G0021601) #24	Sugp2 (MGP_PahariEiJ_G0021602) #25	Homer3 (MGP_PahariEiJ_G0021603) #26	Ddx49 (MGP_PahariEiJ_G0021604) #27	Cope (MGP_PahariEiJ_G0021605) #28	MGP_PahariEiJ_G0021606 #30	Upf1 (MGP_PahariEiJ_G0021607) #31	Comp (MGP_PahariEiJ_G0021608) #32	Crtc1 (MGP_PahariEiJ_G0021609) #33	Klhl26 (MGP_PahariEiJ_G0021610) #34	Tmem59l (MGP_PahariEiJ_G0021611) #35	Crlf1 (MGP_PahariEiJ_G0021612) #36	Rex1bd (MGP_PahariEiJ_G0021613) #37	MGP_PahariEiJ_G0021614
Rat	MODERN SPECIES	7	Pbx4 (ENSRNOG00000010736)	Cilp2 (ENSRNOG00000020622) #8	Yjefn3 (ENSRNOG00000039191) #9	Ndufa13 (ENSRNOG00000020602) #10	Tssk6 (ENSRNOG00000020599) #11	Gatad2a (ENSRNOG00000022173) #12	Mau2 (ENSRNOG00000020526) #13	Sugp1 (ENSRNOG00000052111) #14	Tm6sf2 (ENSRNOG00000042237) #15	Hapln4 (ENSRNOG00000049949) #16	Ncan (ENSRNOG00000048036) #17	Nr2c2ap (ENSRNOG00000022247) #18	Rfxank (ENSRNOG00000033318) #19	Borcs8 (ENSRNOG00000020427) #20	Mef2b (ENSRNOG00000020400) #21	Tmem161a (ENSRNOG00000020390) #22	Slc25a42 (ENSRNOG00000020345) #23	Armc6 (ENSRNOG00000020280) #24	Sugp2 (ENSRNOG00000020269) #25	Homer3 (ENSRNOG00000020229) #26	Ddx49 (ENSRNOG00000022368) #27	Cope (ENSRNOG00000020178) #28	Cers1 (ENSRNOG00000067124) #29	Gdf1 (ENSRNOG00000070518) #30	Upf1 (ENSRNOG00000020134) #31	Comp (ENSRNOG00000048472) #32	Crtc1 (ENSRNOG00000022421) #33	Klhl26 (ENSRNOG00000020088) #34	Tmem59l (ENSRNOG00000022432) #35	Crlf1 (ENSRNOG00000020030) #36	Rex1bd (ENSRNOG00000019990) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1870	Pbx4 (ENSNGAG00000013031)	Cilp2 (ENSNGAG00000011748) #8	Yjefn3 (ENSNGAG00000021673) #9	Ndufa13 (ENSNGAG00000023080) #10	Tssk6 (ENSNGAG00000001299) #11	Gatad2a (ENSNGAG00000004469) #12	Mau2 (ENSNGAG00000015571) #13	Sugp1 (ENSNGAG00000018965) #14	Tm6sf2 (ENSNGAG00000020192) #15	Hapln4 (ENSNGAG00000014554) #16	Ncan (ENSNGAG00000022597) #17	Nr2c2ap (ENSNGAG00000010770) #18	Rfxank (ENSNGAG00000012986) #19	Borcs8 (ENSNGAG00000023653) #20	Mef2b (ENSNGAG00000010342) #21	Tmem161a (ENSNGAG00000023788) #22	Slc25a42 (ENSNGAG00000023980) #23	Armc6 (ENSNGAG00000021205) #24	Sugp2 (ENSNGAG00000005936) #25	Homer3 (ENSNGAG00000015803) #26	Ddx49 (ENSNGAG00000019673) #27	Cope (ENSNGAG00000022394) #28	ENSNGAG00000022292 #29	ENSNGAG00000022538 #30	Upf1 (ENSNGAG00000024107) #31	Comp (ENSNGAG00000024332) #32	Crtc1 (ENSNGAG00000021475) #33	Klhl26 (ENSNGAG00000010743) #34	Tmem59l (ENSNGAG00000020797) #35	Crlf1 (ENSNGAG00000022169) #36	Rex1bd (ENSNGAG00000013627) #37
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00390000000672.a.a #22
Pika	MODERN SPECIES	1956																ENSOPRG00000005876 #22
Tree shrew	MODERN SPECIES	2501															ENSTBEG00000010368 #21	TMEM161A (ENSTBEG00000010212) #22
Primates	ANCESTRAL SPECIES	18	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00910000148304	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00910000148304	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36
Hominidae	ANCESTRAL SPECIES		ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Pan	ANCESTRAL SPECIES	14	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Chimpanzee	MODERN SPECIES	10	PBX4 (ENSPTRG00000010744)	CILP2 (ENSPTRG00000010743) #8	YJEFN3 (ENSPTRG00000010742) #9	NDUFA13 (ENSPTRG00000010741) #10	ENSPTRG00000043712 #11	GATAD2A (ENSPTRG00000010739) #12	MAU2 (ENSPTRG00000010738) #13	SUGP1 (ENSPTRG00000010737) #14	TM6SF2 (ENSPTRG00000010736) #15	HAPLN4 (ENSPTRG00000033676) #16	NCAN (ENSPTRG00000010734) #17	NR2C2AP (ENSPTRG00000010733) #18	RFXANK (ENSPTRG00000010732) #19	BORCS8 (ENSPTRG00000039907) #20	MEF2B (ENSPTRG00000010731) #21	TMEM161A (ENSPTRG00000010730) #22	SLC25A42 (ENSPTRG00000010729) #23	ARMC6 (ENSPTRG00000010728) #24	SUGP2 (ENSPTRG00000010727) #25	HOMER3 (ENSPTRG00000010726) #26	DDX49 (ENSPTRG00000010725) #27	COPE (ENSPTRG00000010723) #28	CERS1 (ENSPTRG00000039869) #29	GDF1 (ENSPTRG00000050095) #30	UPF1 (ENSPTRG00000010721) #31	COMP (ENSPTRG00000010720) #32	CRTC1 (ENSPTRG00000010719) #33	KLHL26 (ENSPTRG00000010718) #34	TMEM59L (ENSPTRG00000010717) #35	ENSPTRG00000044633	CRLF1 (ENSPTRG00000010716) #36
Bonobo	MODERN SPECIES	10	PBX4 (ENSPPAG00000035891)	CILP2 (ENSPPAG00000035758) #8	YJEFN3 (ENSPPAG00000025286) #9	ENSPPAG00000016456 #10	TSSK6 (ENSPPAG00000022354) #11	GATAD2A (ENSPPAG00000003218) #12	MAU2 (ENSPPAG00000032359) #13	SUGP1 (ENSPPAG00000037102) #14	TM6SF2 (ENSPPAG00000043499) #15	HAPLN4 (ENSPPAG00000013291) #16	NCAN (ENSPPAG00000003961) #17	NR2C2AP (ENSPPAG00000008303) #18	RFXANK (ENSPPAG00000032045) #19	BORCS8 (ENSPPAG00000033735) #20	MEF2B (ENSPPAG00000029747) #21	TMEM161A (ENSPPAG00000041901) #22	SLC25A42 (ENSPPAG00000036060) #23	ARMC6 (ENSPPAG00000040716) #24	SUGP2 (ENSPPAG00000043787) #25	HOMER3 (ENSPPAG00000037113) #26	DDX49 (ENSPPAG00000035217) #27	COPE (ENSPPAG00000020767) #28	CERS1 (ENSPPAG00000036380) #29	UPF1 (ENSPPAG00000043884) #31	COMP (ENSPPAG00000040783) #32	CRTC1 (ENSPPAG00000003288) #33	KLHL26 (ENSPPAG00000039902) #34	TMEM59L (ENSPPAG00000029514) #35	CRLF1 (ENSPPAG00000041635) #36	ENSPPAG00000039468	REX1BD (ENSPPAG00000043331) #37
Human	MODERN SPECIES	10	YJEFN3 (ENSG00000250067) #9	ENSG00000258674	NDUFA13 (ENSG00000186010) #10	TSSK6 (ENSG00000178093) #11	GATAD2A (ENSG00000167491) #12	MAU2 (ENSG00000129933) #13	SUGP1 (ENSG00000105705) #14	TM6SF2 (ENSG00000213996) #15	HAPLN4 (ENSG00000187664) #16	NCAN (ENSG00000130287) #17	NR2C2AP (ENSG00000184162) #18	RFXANK (ENSG00000064490) #19	BORCS8 (ENSG00000254901) #20	BORCS8-MEF2B (ENSG00000064489)	MEF2B (ENSG00000213999) #21	TMEM161A (ENSG00000064545) #22	SLC25A42 (ENSG00000181035) #23	ARMC6 (ENSG00000105676) #24	SUGP2 (ENSG00000064607) #25	HOMER3 (ENSG00000051128) #26	DDX49 (ENSG00000105671) #27	COPE (ENSG00000105669) #28	CERS1 (ENSG00000223802) #29	GDF1 (ENSG00000130283) #30	UPF1 (ENSG00000005007) #31	COMP (ENSG00000105664) #32	CRTC1 (ENSG00000105662) #33	KLHL26 (ENSG00000167487) #34	TMEM59L (ENSG00000105696) #35	REX1BD (ENSG00000006015) #37	CRLF1 (ENSG00000006016) #36
Gorilla	MODERN SPECIES	10	PBX4 (ENSGGOG00000006000)	CILP2 (ENSGGOG00000005993) #8	YJEFN3 (ENSGGOG00000005985) #9	NDUFA13 (ENSGGOG00000040690) #10	TSSK6 (ENSGGOG00000042656) #11	GATAD2A (ENSGGOG00000005973) #12	MAU2 (ENSGGOG00000002989) #13	SUGP1 (ENSGGOG00000002984) #14	TM6SF2 (ENSGGOG00000002983) #15	HAPLN4 (ENSGGOG00000002981) #16	NCAN (ENSGGOG00000002977) #17	NR2C2AP (ENSGGOG00000012536) #18	RFXANK (ENSGGOG00000012530) #19	BORCS8 (ENSGGOG00000044155) #20	MEF2B (ENSGGOG00000009730) #21	TMEM161A (ENSGGOG00000022481) #22	SLC25A42 (ENSGGOG00000008113) #23	ARMC6 (ENSGGOG00000006708) #24	SUGP2 (ENSGGOG00000013540) #25	HOMER3 (ENSGGOG00000007011) #26	DDX49 (ENSGGOG00000037966) #27	COPE (ENSGGOG00000006987) #28	ENSGGOG00000025662 #30	UPF1 (ENSGGOG00000002608) #31	COMP (ENSGGOG00000007897) #32	CRTC1 (ENSGGOG00000000987) #33	KLHL26 (ENSGGOG00000007063) #34	TMEM59L (ENSGGOG00000011271) #35	CRLF1 (ENSGGOG00000010973) #36	REX1BD (ENSGGOG00000026716) #37	ENSGGOG00000036627
Orangutan	MODERN SPECIES	10	PBX4 (ENSPPYG00000035724)	CILP2 (ENSPPYG00000009773) #8	YJEFN3 (ENSPPYG00000009772) #9	NDUFA13 (ENSPPYG00000036460) #10	TSSK6 (ENSPPYG00000009770) #11	GATAD2A (ENSPPYG00000009769) #12	MAU2 (ENSPPYG00000009767) #13	SUGP1 (ENSPPYG00000009766) #14	TM6SF2 (ENSPPYG00000009765) #15	HAPLN4 (ENSPPYG00000009764) #16	NCAN (ENSPPYG00000009763) #17	NR2C2AP (ENSPPYG00000009762) #18	RFXANK (ENSPPYG00000009761) #19	BORCS8 (ENSPPYG00000039532) #20	MEF2B (ENSPPYG00000009760) #21	TMEM161A (ENSPPYG00000009759) #22	SLC25A42 (ENSPPYG00000009758) #23	ARMC6 (ENSPPYG00000009757) #24	SUGP2 (ENSPPYG00000009756) #25	HOMER3 (ENSPPYG00000035001) #26	DDX49 (ENSPPYG00000009755) #27	COPE (ENSPPYG00000009753) #28	CERS1 (ENSPPYG00000029471) #29	UPF1 (ENSPPYG00000009752) #31	COMP (ENSPPYG00000036755) #32	CRTC1 (ENSPPYG00000009751) #33	KLHL26 (ENSPPYG00000009750) #34	TMEM59L (ENSPPYG00000009749) #35	CRLF1 (ENSPPYG00000009748) #36	REX1BD (ENSPPYG00000009747) #37	UBA52 (ENSPPYG00000034989)
Gibbon	MODERN SPECIES		ENSNLEG00000018526	CILP2 (ENSNLEG00000006302) #8	YJEFN3 (ENSNLEG00000027046) #9	NDUFA13 (ENSNLEG00000006289) #10	TSSK6 (ENSNLEG00000019216) #11	GATAD2A (ENSNLEG00000006277) #12	MAU2 (ENSNLEG00000026855) #13	SUGP1 (ENSNLEG00000006236) #14	TM6SF2 (ENSNLEG00000006229) #15	HAPLN4 (ENSNLEG00000006225) #16	NCAN (ENSNLEG00000006221) #17	NR2C2AP (ENSNLEG00000006212) #18	RFXANK (ENSNLEG00000006200) #19	ENSNLEG00000006195 #20	MEF2B (ENSNLEG00000006191) #21	ENSNLEG00000006186 #22	SLC25A42 (ENSNLEG00000027898) #23	ENSNLEG00000006185	ARMC6 (ENSNLEG00000006169) #24	SUGP2 (ENSNLEG00000006162) #25	HOMER3 (ENSNLEG00000006154) #26	DDX49 (ENSNLEG00000006136) #27	COPE (ENSNLEG00000006090) #28	GDF1 (ENSNLEG00000006089) #30	UPF1 (ENSNLEG00000006062) #31	ENSNLEG00000005980 #32	CRTC1 (ENSNLEG00000006083) #33	ENSNLEG00000006077 #34	TMEM59L (ENSNLEG00000006075) #35	REX1BD (ENSNLEG00000027561) #37	ENSNLEG00000034752
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00910000148304	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00910000148304	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36
Vervet Monkey	MODERN SPECIES	25	LPAR2 (ENSCSAG00000005063) #7	PBX4 (ENSCSAG00000005070)	CILP2 (ENSCSAG00000005072) #8	NDUFA13 (ENSCSAG00000005084) #10	TSSK6 (ENSCSAG00000018500) #11	GATAD2A (ENSCSAG00000005096) #12	MAU2 (ENSCSAG00000005122) #13	SUGP1 (ENSCSAG00000005148) #14	TM6SF2 (ENSCSAG00000005157) #15	HAPLN4 (ENSCSAG00000005162) #16	NCAN (ENSCSAG00000005190) #17	NR2C2AP (ENSCSAG00000005205) #18	RFXANK (ENSCSAG00000005210) #19	BORCS8 (ENSCSAG00000005214) #20	MEF2B (ENSCSAG00000005217) #21	TMEM161A (ENSCSAG00000005220) #22	SLC25A42 (ENSCSAG00000005223) #23	ARMC6 (ENSCSAG00000005225) #24	SUGP2 (ENSCSAG00000005226) #25	HOMER3 (ENSCSAG00000005233) #26	DDX49 (ENSCSAG00000005251) #27	COPE (ENSCSAG00000005262) #28	CERS1 (ENSCSAG00000005267) #29	GDF1 (ENSCSAG00000005273) #30	UPF1 (ENSCSAG00000005276) #31	COMP (ENSCSAG00000005292) #32	CRTC1 (ENSCSAG00000005304) #33	KLHL26 (ENSCSAG00000005309) #34	TMEM59L (ENSCSAG00000005314) #35	CRLF1 (ENSCSAG00000005321) #36	REX1BD (ENSCSAG00000005329) #37
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00910000148304	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36
Macaca	ANCESTRAL SPECIES	21	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00910000148304	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36
Pig-tailed macaque	MODERN SPECIES	76	ENSMNEG00000010618	CILP2 (ENSMNEG00000034197) #8	YJEFN3 (ENSMNEG00000037092) #9	NDUFA13 (ENSMNEG00000039567) #10	TSSK6 (ENSMNEG00000009045) #11	ENSMNEG00000043233 #12	MAU2 (ENSMNEG00000034232) #13	SUGP1 (ENSMNEG00000042010) #14	TM6SF2 (ENSMNEG00000043588) #15	HAPLN4 (ENSMNEG00000034804) #16	NCAN (ENSMNEG00000029669) #17	RFXANK (ENSMNEG00000025165) #19	NR2C2AP (ENSMNEG00000037479) #18	BORCS8 (ENSMNEG00000033374) #20	MEF2B (ENSMNEG00000041102) #21	TMEM161A (ENSMNEG00000027465) #22	SLC25A42 (ENSMNEG00000043911) #23	ENSMNEG00000030397	ARMC6 (ENSMNEG00000043051) #24	SUGP2 (ENSMNEG00000043062) #25	HOMER3 (ENSMNEG00000042042) #26	DDX49 (ENSMNEG00000029654) #27	COPE (ENSMNEG00000031787) #28	GDF1 (ENSMNEG00000041111) #30	UPF1 (ENSMNEG00000000046) #31	COMP (ENSMNEG00000037024) #32	CRTC1 (ENSMNEG00000021530) #33	KLHL26 (ENSMNEG00000045346) #34	TMEM59L (ENSMNEG00000044854) #35	CRLF1 (ENSMNEG00000033002) #36	REX1BD (ENSMNEG00000045352) #37
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00950000183110.a	ENSGT01050000244941.B.c #7	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00940000160464 #11	ENSGT00390000004097.a.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT01100000263493.a.a.a.b.a.a.b.a.a.a.b	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36
Rhesus	MODERN SPECIES	10	GMIP (ENSMMUG00000003036)	LPAR2 (ENSMMUG00000000654) #7	PBX4 (ENSMMUG00000048108)	CILP2 (ENSMMUG00000011352) #8	YJEFN3 (ENSMMUG00000011351) #9	TSSK6 (ENSMMUG00000049072) #11	GATAD2A (ENSMMUG00000003164) #12	MAU2 (ENSMMUG00000008931) #13	SUGP1 (ENSMMUG00000028834) #14	TM6SF2 (ENSMMUG00000008576) #15	HAPLN4 (ENSMMUG00000008578) #16	NCAN (ENSMMUG00000062498) #17	NR2C2AP (ENSMMUG00000010723) #18	RFXANK (ENSMMUG00000010722) #19	BORCS8 (ENSMMUG00000018368) #21	TMEM161A (ENSMMUG00000018367) #22	SLC25A42 (ENSMMUG00000019669) #23	ARMC6 (ENSMMUG00000019668) #24	SUGP2 (ENSMMUG00000019665) #25	HOMER3 (ENSMMUG00000023294) #26	DDX49 (ENSMMUG00000023293) #27	COPE (ENSMMUG00000023291) #28	CERS1 (ENSMMUG00000059247) #29	GDF1 (ENSMMUG00000023290) #30	UPF1 (ENSMMUG00000023286) #31	ENSMMUG00000056644	COMP (ENSMMUG00000006511) #32	CRTC1 (ENSMMUG00000006509) #33	KLHL26 (ENSMMUG00000064204) #34	CRLF1 (ENSMMUG00000060102) #36	TMEM59L (ENSMMUG00000009988) #35
Crab-eating macaque	MODERN SPECIES	10	LPAR2 (ENSMFAG00000040780) #7	GMIP (ENSMFAG00000046087)	PBX4 (ENSMFAG00000031948)	CILP2 (ENSMFAG00000064577) #8	YJEFN3 (ENSMFAG00000011503) #9	ENSMFAG00000002152 #12	MAU2 (ENSMFAG00000041829) #13	SUGP1 (ENSMFAG00000031157) #14	TM6SF2 (ENSMFAG00000006917) #15	HAPLN4 (ENSMFAG00000029816) #16	NCAN (ENSMFAG00000043588) #17	NR2C2AP (ENSMFAG00000042311) #18	RFXANK (ENSMFAG00000003753) #19	MEF2B (ENSMFAG00000032755) #21	SLC25A42 (ENSMFAG00000039473) #23	TMEM161A (ENSMFAG00000043553) #22	ARMC6 (ENSMFAG00000000505) #24	SUGP2 (ENSMFAG00000040352) #25	HOMER3 (ENSMFAG00000031509) #26	DDX49 (ENSMFAG00000044697) #27	COPE (ENSMFAG00000038870) #28	GDF1 (ENSMFAG00000064570) #30	CERS1 (ENSMFAG00000044990) #29	ENSMFAG00000065281 #31	ENSMFAG00000037748 #31	ENSMFAG00000052968	ENSMFAG00000004008 #32	CRTC1 (ENSMFAG00000045375) #33	KLHL26 (ENSMFAG00000062634) #34	ENSMFAG00000044055 #34	ENSMFAG00000045477 #35
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Olive baboon	MODERN SPECIES	12	PBX4 (ENSPANG00000004463)	CILP2 (ENSPANG00000002530) #8	YJEFN3 (ENSPANG00000015322) #9	NDUFA13 (ENSPANG00000001628) #10	TSSK6 (ENSPANG00000005919) #11	GATAD2A (ENSPANG00000011632) #12	MAU2 (ENSPANG00000002876) #13	SUGP1 (ENSPANG00000014398) #14	TM6SF2 (ENSPANG00000017375) #15	HAPLN4 (ENSPANG00000004385) #16	NCAN (ENSPANG00000017942) #17	NR2C2AP (ENSPANG00000017708) #18	RFXANK (ENSPANG00000011633) #19	BORCS8 (ENSPANG00000034354) #20	MEF2B (ENSPANG00000023043) #21	TMEM161A (ENSPANG00000023920) #22	SLC25A42 (ENSPANG00000004441) #23	ARMC6 (ENSPANG00000002531) #24	SUGP2 (ENSPANG00000004442) #25	HOMER3 (ENSPANG00000004386) #26	DDX49 (ENSPANG00000003161) #27	COPE (ENSPANG00000002532) #28	CERS1 (ENSPANG00000005280) #29	GDF1 (ENSPANG00000004387) #30	UPF1 (ENSPANG00000008847) #31	COMP (ENSPANG00000004388) #32	CRTC1 (ENSPANG00000014162) #33	KLHL26 (ENSPANG00000023921) #34	TMEM59L (ENSPANG00000018010) #35	CRLF1 (ENSPANG00000011399) #36	REX1BD (ENSPANG00000032734) #37
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Drill	MODERN SPECIES	160	ENSMLEG00000038352	PBX4 (ENSMLEG00000028081)	CILP2 (ENSMLEG00000038834) #8	NDUFA13 (ENSMLEG00000027225) #10	TSSK6 (ENSMLEG00000010320) #11	GATAD2A (ENSMLEG00000040547) #12	MAU2 (ENSMLEG00000035371) #13	SUGP1 (ENSMLEG00000043364) #14	TM6SF2 (ENSMLEG00000027647) #15	HAPLN4 (ENSMLEG00000043866) #16	NCAN (ENSMLEG00000035960) #17	NR2C2AP (ENSMLEG00000026610) #18	RFXANK (ENSMLEG00000007628) #19	BORCS8 (ENSMLEG00000036175) #20	MEF2B (ENSMLEG00000002780) #21	TMEM161A (ENSMLEG00000041570) #22	SLC25A42 (ENSMLEG00000038599) #23	ARMC6 (ENSMLEG00000039585) #24	SUGP2 (ENSMLEG00000036719) #25	HOMER3 (ENSMLEG00000042234) #26	DDX49 (ENSMLEG00000042550) #27	COPE (ENSMLEG00000042923) #28	CERS1 (ENSMLEG00000020659) #29	UPF1 (ENSMLEG00000028404) #31	COMP (ENSMLEG00000028753) #32	CRTC1 (ENSMLEG00000044311) #33	KLHL26 (ENSMLEG00000038620) #34	TMEM59L (ENSMLEG00000032687) #35	CRLF1 (ENSMLEG00000041126) #36	REX1BD (ENSMLEG00000041099) #37	UBA52 (ENSMLEG00000038811)
Sooty mangabey	MODERN SPECIES	347	PBX4 (ENSCATG00000035336)	CILP2 (ENSCATG00000040476) #8	YJEFN3 (ENSCATG00000037712) #9	NDUFA13 (ENSCATG00000038956) #10	TSSK6 (ENSCATG00000003439) #11	ENSCATG00000035199 #12	MAU2 (ENSCATG00000015302) #13	SUGP1 (ENSCATG00000033059) #14	TM6SF2 (ENSCATG00000038371) #15	HAPLN4 (ENSCATG00000033215) #16	NCAN (ENSCATG00000033037) #17	NR2C2AP (ENSCATG00000035313) #18	RFXANK (ENSCATG00000032949) #19	BORCS8 (ENSCATG00000034039) #20	MEF2B (ENSCATG00000031174) #21	TMEM161A (ENSCATG00000036119) #22	SLC25A42 (ENSCATG00000035155) #23	ARMC6 (ENSCATG00000032065) #24	SUGP2 (ENSCATG00000029755) #25	HOMER3 (ENSCATG00000036483) #26	DDX49 (ENSCATG00000032577) #27	COPE (ENSCATG00000038467) #28	CERS1 (ENSCATG00000033850) #29	GDF1 (ENSCATG00000033208) #30	UPF1 (ENSCATG00000040306) #31	ENSCATG00000029785	COMP (ENSCATG00000021027) #32	CRTC1 (ENSCATG00000037923) #33	KLHL26 (ENSCATG00000040338) #34	TMEM59L (ENSCATG00000031976) #35	CRLF1 (ENSCATG00000031612) #36
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.n.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856.d #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Golden snub-nosed monkey	MODERN SPECIES	2586	PBX4 (ENSRROG00000033089)	CILP2 (ENSRROG00000044306) #8	YJEFN3 (ENSRROG00000040358) #9	NDUFA13 (ENSRROG00000043641) #10	TSSK6 (ENSRROG00000027240) #11	ENSRROG00000031855 #12	MAU2 (ENSRROG00000032649) #13	SUGP1 (ENSRROG00000030048) #14	TM6SF2 (ENSRROG00000036675) #15	HAPLN4 (ENSRROG00000029649) #16	NCAN (ENSRROG00000037872) #17	NR2C2AP (ENSRROG00000033994) #18	RFXANK (ENSRROG00000028283) #19	BORCS8 (ENSRROG00000045680) #20	MEF2B (ENSRROG00000033740) #21	TMEM161A (ENSRROG00000024629) #22	SLC25A42 (ENSRROG00000040352) #23	ARMC6 (ENSRROG00000034739) #24	SUGP2 (ENSRROG00000029264) #25	HOMER3 (ENSRROG00000038822) #26	DDX49 (ENSRROG00000032460) #27	COPE (ENSRROG00000032396) #28	CERS1 (ENSRROG00000038529) #29	GDF1 (ENSRROG00000041769) #30	UPF1 (ENSRROG00000040935) #31	COMP (ENSRROG00000043878) #32	CRTC1 (ENSRROG00000039912) #33	KLHL26 (ENSRROG00000030821) #34	TMEM59L (ENSRROG00000024021) #35	CRLF1 (ENSRROG00000030939) #36	REX1BD (ENSRROG00000030965) #37
Black snub-nosed monkey	MODERN SPECIES	1576	PBX4 (ENSRBIG00000043379)	CILP2 (ENSRBIG00000033619) #8	YJEFN3 (ENSRBIG00000044837) #9	NDUFA13 (ENSRBIG00000029310) #10	TSSK6 (ENSRBIG00000020631) #11	ENSRBIG00000029752 #12	MAU2 (ENSRBIG00000036077) #13	SUGP1 (ENSRBIG00000035555) #14	TM6SF2 (ENSRBIG00000035648) #15	HAPLN4 (ENSRBIG00000028696) #16	NCAN (ENSRBIG00000028711) #17	RFXANK (ENSRBIG00000027696) #19	NR2C2AP (ENSRBIG00000035480) #18	BORCS8 (ENSRBIG00000044655) #20	MEF2B (ENSRBIG00000037482) #21	TMEM161A (ENSRBIG00000035635) #22	SLC25A42 (ENSRBIG00000027977) #23	ENSRBIG00000034545	ARMC6 (ENSRBIG00000038109) #24	SUGP2 (ENSRBIG00000020354) #25	HOMER3 (ENSRBIG00000038778) #26	DDX49 (ENSRBIG00000030758) #27	COPE (ENSRBIG00000040843) #28	CERS1 (ENSRBIG00000036984) #29	UPF1 (ENSRBIG00000013894) #31	COMP (ENSRBIG00000006193) #32	CRTC1 (ENSRBIG00000036709) #33	KLHL26 (ENSRBIG00000023916) #34
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081.g.a #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081.g.a #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Marmoset	MODERN SPECIES	14	ENSCJAG00000073644	CILP2 (ENSCJAG00000005650) #8	YJEFN3 (ENSCJAG00000005654) #9	ENSCJAG00000043112 #10	GATAD2A (ENSCJAG00000040704) #12	MAU2 (ENSCJAG00000039088) #13	SUGP1 (ENSCJAG00000005755) #14	TM6SF2 (ENSCJAG00000039656) #15	HAPLN4 (ENSCJAG00000073329) #16	ENSCJAG00000070942	NCAN (ENSCJAG00000008512) #17	NR2C2AP (ENSCJAG00000019782) #18	RFXANK (ENSCJAG00000019775) #19	BORCS8 (ENSCJAG00000046526) #20	MEF2B (ENSCJAG00000019767) #21	TMEM161A (ENSCJAG00000019759) #22	SLC25A42 (ENSCJAG00000044017) #23	ARMC6 (ENSCJAG00000019747) #24	SUGP2 (ENSCJAG00000019714) #25	HOMER3 (ENSCJAG00000080144) #26	DDX49 (ENSCJAG00000042114) #27	COPE (ENSCJAG00000019706) #28	CERS1 (ENSCJAG00000019660) #29	UPF1 (ENSCJAG00000019627) #31	COMP (ENSCJAG00000001175) #32	CRTC1 (ENSCJAG00000007421) #33	KLHL26 (ENSCJAG00000007445) #34	TMEM59L (ENSCJAG00000007447) #35	CRLF1 (ENSCJAG00000007427) #36	ENSCJAG00000007459 #37	ENSCJAG00000053720
Cebidae_a	ANCESTRAL SPECIES	48	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081.g.a #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Capuchin	DUPLICATION
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	1006																ENSCCAG00000027007 #22
Capuchin	MODERN SPECIES	1083																ENSCCAG00000022153 #22
Capuchin	MODERN SPECIES	280	PBX4 (ENSCCAG00000028260)	CILP2 (ENSCCAG00000025104) #8	YJEFN3 (ENSCCAG00000036770) #9	ENSCCAG00000027170 #10	TSSK6 (ENSCCAG00000019676) #11	GATAD2A (ENSCCAG00000036212) #12	MAU2 (ENSCCAG00000031923) #13	SUGP1 (ENSCCAG00000024177) #14	TM6SF2 (ENSCCAG00000030646) #15	HAPLN4 (ENSCCAG00000030280) #16	NCAN (ENSCCAG00000029973) #17	NR2C2AP (ENSCCAG00000034992) #18	RFXANK (ENSCCAG00000034756) #19	BORCS8 (ENSCCAG00000026464) #20	MEF2B (ENSCCAG00000025516) #21	ENSCCAG00000034387 #22	SLC25A42 (ENSCCAG00000028461) #23	ARMC6 (ENSCCAG00000027993) #24	SUGP2 (ENSCCAG00000023178) #25	HOMER3 (ENSCCAG00000024819) #26	DDX49 (ENSCCAG00000036092) #27	COPE (ENSCCAG00000036516) #28	CERS1 (ENSCCAG00000033033) #29	GDF1 (ENSCCAG00000027600) #30	UPF1 (ENSCCAG00000032175) #31	COMP (ENSCCAG00000032561) #32	CRTC1 (ENSCCAG00000023281) #33	KLHL26 (ENSCCAG00000019068) #34	TMEM59L (ENSCCAG00000030314) #35	CRLF1 (ENSCCAG00000027668) #36	REX1BD (ENSCCAG00000025734) #37
Bolivian squirrel monkey	MODERN SPECIES	199	ENSSBOG00000031282	CILP2 (ENSSBOG00000026211) #8	YJEFN3 (ENSSBOG00000021793) #9	NDUFA13 (ENSSBOG00000019126) #10	TSSK6 (ENSSBOG00000018199) #11	GATAD2A (ENSSBOG00000029481) #12	MAU2 (ENSSBOG00000034577) #13	SUGP1 (ENSSBOG00000020160) #14	TM6SF2 (ENSSBOG00000031897) #15	HAPLN4 (ENSSBOG00000028603) #16	NCAN (ENSSBOG00000033005) #17	NR2C2AP (ENSSBOG00000031337) #18	RFXANK (ENSSBOG00000022019) #19	BORCS8 (ENSSBOG00000022945) #20	MEF2B (ENSSBOG00000024550) #21	TMEM161A (ENSSBOG00000031066) #22	SLC25A42 (ENSSBOG00000024288) #23	ENSSBOG00000024227 #24	SUGP2 (ENSSBOG00000020629) #25	HOMER3 (ENSSBOG00000030722) #26	DDX49 (ENSSBOG00000035812) #27	COPE (ENSSBOG00000014113) #28	CERS1 (ENSSBOG00000000038) #29	GDF1 (ENSSBOG00000035053) #30	UPF1 (ENSSBOG00000023632) #31	COMP (ENSSBOG00000003799) #32	CRTC1 (ENSSBOG00000032842) #33	KLHL26 (ENSSBOG00000031453) #34	TMEM59L (ENSSBOG00000019651) #35	CRLF1 (ENSSBOG00000029563) #36	REX1BD (ENSSBOG00000030684) #37
Mas night monkey	MODERN SPECIES	1353	PBX4 (ENSANAG00000032208)	CILP2 (ENSANAG00000024220) #8	YJEFN3 (ENSANAG00000026506) #9	NDUFA13 (ENSANAG00000033597) #10	TSSK6 (ENSANAG00000020096) #11	GATAD2A (ENSANAG00000038065) #12	MAU2 (ENSANAG00000026794) #13	SUGP1 (ENSANAG00000028538) #14	TM6SF2 (ENSANAG00000034245) #15	HAPLN4 (ENSANAG00000024057) #16	ENSANAG00000035988 #17	NR2C2AP (ENSANAG00000035166) #18	RFXANK (ENSANAG00000025466) #19	BORCS8 (ENSANAG00000034161) #20	MEF2B (ENSANAG00000020769) #21	TMEM161A (ENSANAG00000034160) #22	SLC25A42 (ENSANAG00000030310) #23	ARMC6 (ENSANAG00000025554) #24	SUGP2 (ENSANAG00000027159) #25	ENSANAG00000020793 #26	DDX49 (ENSANAG00000031415) #27	COPE (ENSANAG00000018604) #28	GDF1 (ENSANAG00000037936) #30	UPF1 (ENSANAG00000024107) #31	COMP (ENSANAG00000023447) #32	ENSANAG00000030890 #33	KLHL26 (ENSANAG00000022024) #34	TMEM59L (ENSANAG00000037189) #35	CRLF1 (ENSANAG00000022571) #36	REX1BD (ENSANAG00000031851) #37	UBA52 (ENSANAG00000037329)
Tarsier	MODERN SPECIES	4854																TMEM161A (ENSTSYG00000005147) #22
Strepsirrhini	ANCESTRAL SPECIES	33	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.l #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Lemuriformes	ANCESTRAL SPECIES	45	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.l #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Lemuriformes_a	ANCESTRAL SPECIES	65	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a.l #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Coquerels sifaka	MODERN SPECIES	589	PBX4 (ENSPCOG00000016827)	CILP2 (ENSPCOG00000016451) #8	YJEFN3 (ENSPCOG00000028351) #9	NDUFA13 (ENSPCOG00000015544) #10	TSSK6 (ENSPCOG00000012813) #11	GATAD2A (ENSPCOG00000019794) #12	MAU2 (ENSPCOG00000020236) #13	SUGP1 (ENSPCOG00000017524) #14	TM6SF2 (ENSPCOG00000024818) #15	HAPLN4 (ENSPCOG00000023645) #16	NCAN (ENSPCOG00000015066) #17	NR2C2AP (ENSPCOG00000023079) #18	RFXANK (ENSPCOG00000019783) #19	BORCS8 (ENSPCOG00000016887) #20	MEF2B (ENSPCOG00000024251) #21	TMEM161A (ENSPCOG00000012683) #22	SLC25A42 (ENSPCOG00000026001) #23	ARMC6 (ENSPCOG00000017481) #24	SUGP2 (ENSPCOG00000016042) #25	HOMER3 (ENSPCOG00000014798) #26	DDX49 (ENSPCOG00000024973) #27	COPE (ENSPCOG00000015758) #28	GDF1 (ENSPCOG00000015607) #30	UPF1 (ENSPCOG00000023813) #31	COMP (ENSPCOG00000023117) #32	CRTC1 (ENSPCOG00000027092) #33	KLHL26 (ENSPCOG00000028544) #34	TMEM59L (ENSPCOG00000026454) #35	CRLF1 (ENSPCOG00000013640) #36	REX1BD (ENSPCOG00000014515) #37	ENSPCOG00000012784
Greater bamboo lemur	MODERN SPECIES	392	ENSPSMG00000002390	CILP2 (ENSPSMG00000002378) #8	YJEFN3 (ENSPSMG00000002364) #9	NDUFA13 (ENSPSMG00000002354) #10	TSSK6 (ENSPSMG00000002343) #11	GATAD2A (ENSPSMG00000002335) #12	MAU2 (ENSPSMG00000002309) #13	SUGP1 (ENSPSMG00000002255) #14	TM6SF2 (ENSPSMG00000002208) #15	HAPLN4 (ENSPSMG00000002199) #16	NCAN (ENSPSMG00000002186) #17	NR2C2AP (ENSPSMG00000002131) #18	RFXANK (ENSPSMG00000002047) #19	BORCS8 (ENSPSMG00000002009) #20	MEF2B (ENSPSMG00000001996) #21	TMEM161A (ENSPSMG00000001938) #22	SLC25A42 (ENSPSMG00000001893) #23	ARMC6 (ENSPSMG00000001861) #24	SUGP2 (ENSPSMG00000001742) #25	HOMER3 (ENSPSMG00000001606) #26	DDX49 (ENSPSMG00000001520) #27	COPE (ENSPSMG00000001405) #28	CERS1 (ENSPSMG00000001173) #29	GDF1 (ENSPSMG00000001150) #30	UPF1 (ENSPSMG00000001054) #31	COMP (ENSPSMG00000000819) #32	CRTC1 (ENSPSMG00000000672) #33	KLHL26 (ENSPSMG00000000655) #34	TMEM59L (ENSPSMG00000000639) #35	CRLF1 (ENSPSMG00000000604) #36	REX1BD (ENSPSMG00000000580) #37
Mouse lemur	MODERN SPECIES	16	MYO1F (ENSMICG00000006198)	ENSMICG00000006214	ZNF653 (ENSMICG00000034400)	ENSMICG00000045642	HOMER3 (ENSMICG00000038004) #26	ENSMICG00000003656 #26	DDX49 (ENSMICG00000003640) #27	COPE (ENSMICG00000003630) #28	TM6SF2 (ENSMICG00000037360) #15	HAPLN4 (ENSMICG00000032572) #16	NCAN (ENSMICG00000036837) #17	NR2C2AP (ENSMICG00000003978) #18	RFXANK (ENSMICG00000003972) #19	BORCS8 (ENSMICG00000027617) #20	MEF2B (ENSMICG00000000439) #21	TMEM161A (ENSMICG00000034501) #22	SLC25A42 (ENSMICG00000042876) #23	ARMC6 (ENSMICG00000003677) #24	SUGP2 (ENSMICG00000003666) #25	ZNF558 (ENSMICG00000027068)	PALM (ENSMICG00000044367)	MISP (ENSMICG00000034580)	PTBP1 (ENSMICG00000007131)	PLPPR3 (ENSMICG00000031756)	ENSMICG00000028531	FABP2 (ENSMICG00000032838)	PDE5A (ENSMICG00000002964)	MAD2L1 (ENSMICG00000043113)	PRDM5 (ENSMICG00000001459)	NDNF (ENSMICG00000030202)	TNIP3 (ENSMICG00000038352)
Bushbaby	MODERN SPECIES	220	PBX4 (ENSOGAG00000007450)	CILP2 (ENSOGAG00000028615) #8	YJEFN3 (ENSOGAG00000033582) #9	NDUFA13 (ENSOGAG00000007445) #10	TSSK6 (ENSOGAG00000027271) #11	GATAD2A (ENSOGAG00000007442) #12	MAU2 (ENSOGAG00000009979) #13	ENSOGAG00000009975 #14	TM6SF2 (ENSOGAG00000028833) #15	HAPLN4 (ENSOGAG00000009972) #16	NCAN (ENSOGAG00000010954) #17	NR2C2AP (ENSOGAG00000033463) #18	RFXANK (ENSOGAG00000010950) #19	BORCS8 (ENSOGAG00000028427) #20	MEF2B (ENSOGAG00000001694) #21	TMEM161A (ENSOGAG00000015720) #22	SLC25A42 (ENSOGAG00000007251) #23	ARMC6 (ENSOGAG00000007536) #24	SUGP2 (ENSOGAG00000024068) #25	HOMER3 (ENSOGAG00000008261) #26	DDX49 (ENSOGAG00000008259) #27	COPE (ENSOGAG00000031639) #28	CERS1 (ENSOGAG00000033679) #29	GDF1 (ENSOGAG00000012872) #30	UPF1 (ENSOGAG00000012866) #31	COMP (ENSOGAG00000004930) #32	CRTC1 (ENSOGAG00000004927) #33	KLHL26 (ENSOGAG00000004926) #34	TMEM59L (ENSOGAG00000004923) #35	CRLF1 (ENSOGAG00000004920) #36	REX1BD (ENSOGAG00000033304) #37
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00390000007227.b #9	ENSGT00960000189525	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT01090000261752	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000000672.a.a #22
Common shrew	MODERN SPECIES	3512																TMEM161A (ENSSARG00000008833) #22
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00390000007227.b #9	ENSGT00960000189525	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT01090000261752	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Suina	ANCESTRAL SPECIES	39	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Pig	MODERN SPECIES	10	CILP2 (ENSSSCG00000013934) #8	YJEFN3 (ENSSSCG00000013935) #9	NDUFA13 (ENSSSCG00000056961) #10	TSSK6 (ENSSSCG00000013937) #11	GATAD2A (ENSSSCG00000013938) #12	MAU2 (ENSSSCG00000021664) #13	SUGP1 (ENSSSCG00000036970) #14	ENSSSCG00000048260	TM6SF2 (ENSSSCG00000059192) #15	HAPLN4 (ENSSSCG00000034887) #16	NCAN (ENSSSCG00000032131) #17	NR2C2AP (ENSSSCG00000023658) #18	RFXANK (ENSSSCG00000036310) #19	BORCS8 (ENSSSCG00000044084) #20	MEF2B (ENSSSCG00000030351) #21	TMEM161A (ENSSSCG00000033168) #22	SLC25A42 (ENSSSCG00000013927) #23	ENSSSCG00000044637	ARMC6 (ENSSSCG00000049430) #24	SUGP2 (ENSSSCG00000025839) #25	HOMER3 (ENSSSCG00000013919) #26	DDX49 (ENSSSCG00000025329) #27	COPE (ENSSSCG00000027840) #28	CERS1 (ENSSSCG00000013928) #29	UPF1 (ENSSSCG00000039301) #31	COMP (ENSSSCG00000013916) #32	CRTC1 (ENSSSCG00000013915) #33	KLHL26 (ENSSSCG00000013913) #34	TMEM59L (ENSSSCG00000013911) #35	CRLF1 (ENSSSCG00000013909) #36	REX1BD (ENSSSCG00000040666) #37
Chacoan peccary	MODERN SPECIES	769	PBX4 (ENSCWAG00000008974)	CILP2 (ENSCWAG00000008907) #8	YJEFN3 (ENSCWAG00000008846) #9	NDUFA13 (ENSCWAG00000008819) #10	TSSK6 (ENSCWAG00000008796) #11	GATAD2A (ENSCWAG00000008702) #12	MAU2 (ENSCWAG00000008506) #13	SUGP1 (ENSCWAG00000008452) #14	TM6SF2 (ENSCWAG00000008344) #15	HAPLN4 (ENSCWAG00000008277) #16	NCAN (ENSCWAG00000007920) #17	NR2C2AP (ENSCWAG00000007805) #18	RFXANK (ENSCWAG00000020046) #19	BORCS8 (ENSCWAG00000019997) #20	MEF2B (ENSCWAG00000019951) #21	TMEM161A (ENSCWAG00000019820) #22	SLC25A42 (ENSCWAG00000019779) #23	ARMC6 (ENSCWAG00000019757) #24	SUGP2 (ENSCWAG00000019735) #25	HOMER3 (ENSCWAG00000019671) #26	DDX49 (ENSCWAG00000019644) #27	COPE (ENSCWAG00000019578) #28	CERS1 (ENSCWAG00000019515) #29	GDF1 (ENSCWAG00000019490) #30	UPF1 (ENSCWAG00000019458) #31	COMP (ENSCWAG00000019235) #32	CRTC1 (ENSCWAG00000019030) #33	KLHL26 (ENSCWAG00000018976) #34	TMEM59L (ENSCWAG00000018953) #35	CRLF1 (ENSCWAG00000018917) #36	ENSCWAG00000018899
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719.g #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00390000018299.eb.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719.g #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00940000153593.c.a
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00390000018299.eb.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719.g #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Beluga whale	MODERN SPECIES	27	ENSDLEG00000009459	CILP2 (ENSDLEG00000009413) #8	YJEFN3 (ENSDLEG00000009396) #9	ENSDLEG00000009372 #10	TSSK6 (ENSDLEG00000009362) #11	GATAD2A (ENSDLEG00000009307) #12	MAU2 (ENSDLEG00000009190) #13	SUGP1 (ENSDLEG00000009158) #14	TM6SF2 (ENSDLEG00000009148) #15	HAPLN4 (ENSDLEG00000006247) #16	NCAN (ENSDLEG00000006241) #17	ENSDLEG00000006238 #18	RFXANK (ENSDLEG00000006230) #19	ENSDLEG00000006226	MEF2B (ENSDLEG00000006219) #21	TMEM161A (ENSDLEG00000006213) #22	SLC25A42 (ENSDLEG00000006206) #23	ARMC6 (ENSDLEG00000006199) #24	SUGP2 (ENSDLEG00000006190) #25	HOMER3 (ENSDLEG00000006185) #26	DDX49 (ENSDLEG00000006176) #27	COPE (ENSDLEG00000006169) #28	CERS1 (ENSDLEG00000006163) #29	GDF1 (ENSDLEG00000006157) #30	UPF1 (ENSDLEG00000006145) #31	COMP (ENSDLEG00000006134) #32	CRTC1 (ENSDLEG00000006096) #33	KLHL26 (ENSDLEG00000006086) #34	TMEM59L (ENSDLEG00000006084) #35	CRLF1 (ENSDLEG00000006067) #36	ENSDLEG00000006057
Narwhal	MODERN SPECIES	298	ENSMMNG00015006078	CILP2 (ENSMMNG00015006092) #8	YJEFN3 (ENSMMNG00015006128) #9	ENSMMNG00015006145 #10	TSSK6 (ENSMMNG00015006158) #11	GATAD2A (ENSMMNG00015006177) #12	MAU2 (ENSMMNG00015006228) #13	SUGP1 (ENSMMNG00015006270) #14	TM6SF2 (ENSMMNG00015006300) #15	HAPLN4 (ENSMMNG00015006325) #16	NCAN (ENSMMNG00015006441) #17	ENSMMNG00015006667 #18	RFXANK (ENSMMNG00015006700) #19	BORCS8 (ENSMMNG00015006726) #20	MEF2B (ENSMMNG00015006749) #21	TMEM161A (ENSMMNG00015006783) #22	SLC25A42 (ENSMMNG00015006831) #23	ARMC6 (ENSMMNG00015006856) #24	SUGP2 (ENSMMNG00015006879) #25	HOMER3 (ENSMMNG00015006915) #26	DDX49 (ENSMMNG00015006955) #27	COPE (ENSMMNG00015007007) #28	CERS1 (ENSMMNG00015007051) #29	GDF1 (ENSMMNG00015007086) #30	UPF1 (ENSMMNG00015007103) #31	COMP (ENSMMNG00015007143) #32	CRTC1 (ENSMMNG00015007220) #33	KLHL26 (ENSMMNG00015007349) #34	TMEM59L (ENSMMNG00015007375) #35	CRLF1 (ENSMMNG00015007421) #36	REX1BD (ENSMMNG00015007469) #37
Vaquita	MODERN SPECIES	14	LPAR2 (ENSPSNG00000000922) #7	ENSPSNG00000000937	ENSPSNG00000000965	CILP2 (ENSPSNG00000000993) #8	YJEFN3 (ENSPSNG00000001047) #9	TSSK6 (ENSPSNG00000001081) #11	GATAD2A (ENSPSNG00000001112) #12	MAU2 (ENSPSNG00000001203) #13	SUGP1 (ENSPSNG00000001311) #14	TM6SF2 (ENSPSNG00000001343) #15	HAPLN4 (ENSPSNG00000001367) #16	NCAN (ENSPSNG00000001532) #17	NR2C2AP (ENSPSNG00000001752) #18	RFXANK (ENSPSNG00000001779) #19	MEF2B (ENSPSNG00000001853) #21	TMEM161A (ENSPSNG00000001898) #22	SLC25A42 (ENSPSNG00000001921) #23	ARMC6 (ENSPSNG00000001939) #24	SUGP2 (ENSPSNG00000001966) #25	HOMER3 (ENSPSNG00000002016) #26	DDX49 (ENSPSNG00000002062) #27	COPE (ENSPSNG00000002124) #28	CERS1 (ENSPSNG00000002156) #29	GDF1 (ENSPSNG00000002175) #30	UPF1 (ENSPSNG00000002213) #31	COMP (ENSPSNG00000002298) #32	CRTC1 (ENSPSNG00000002462) #33	KLHL26 (ENSPSNG00000002575) #34	TMEM59L (ENSPSNG00000002614) #35	CRLF1 (ENSPSNG00000002653) #36	UBA52 (ENSPSNG00000002675)
Dolphin	MODERN SPECIES	2220												NCAN (ENSTTRG00000007684) #17	NR2C2AP (ENSTTRG00000007679) #18	RFXANK (ENSTTRG00000007673) #19	MEF2B (ENSTTRG00000007659) #21	TMEM161A (ENSTTRG00000007641) #22	SLC25A42 (ENSTTRG00000007625) #23
Sperm whale	MODERN SPECIES	138															MEF2B (ENSPCTG00005018720) #21	TMEM161A (ENSPCTG00005018968) #22	SLC25A42 (ENSPCTG00005019060) #23	ARMC6 (ENSPCTG00005019113) #24
Blue whale	MODERN SPECIES	14	ENSBMSG00010002474	ENSBMSG00010002498	CILP2 (ENSBMSG00010002559) #8	YJEFN3 (ENSBMSG00010002588) #9	TSSK6 (ENSBMSG00010002611) #11	GATAD2A (ENSBMSG00010002620) #12	MAU2 (ENSBMSG00010002666) #13	SUGP1 (ENSBMSG00010002719) #14	TM6SF2 (ENSBMSG00010002725) #15	HAPLN4 (ENSBMSG00010002737) #16	NCAN (ENSBMSG00010002745) #17	NR2C2AP (ENSBMSG00010002762) #18	RFXANK (ENSBMSG00010002771) #19	ENSBMSG00010002783	MEF2B (ENSBMSG00010003849) #21	TMEM161A (ENSBMSG00010003877) #22	SLC25A42 (ENSBMSG00010003900) #23	ARMC6 (ENSBMSG00010003914) #24	SUGP2 (ENSBMSG00010003931) #25	HOMER3 (ENSBMSG00010003958) #26	DDX49 (ENSBMSG00010004039) #27	COPE (ENSBMSG00010004064) #28	CERS1 (ENSBMSG00010004105) #29	GDF1 (ENSBMSG00010004120) #30	UPF1 (ENSBMSG00010004141) #31	COMP (ENSBMSG00010004199) #32	CRTC1 (ENSBMSG00010004257) #33	KLHL26 (ENSBMSG00010004285) #34	TMEM59L (ENSBMSG00010004290) #35	CRLF1 (ENSBMSG00010004297) #36	REX1BD (ENSBMSG00010004317) #37
Pecora	ANCESTRAL SPECIES		ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Yarkand deer	MODERN SPECIES	32	PBX4 (ENSCHYG00000011654)	CILP2 (ENSCHYG00000012104) #8	YJEFN3 (ENSCHYG00000012151) #9	NDUFA13 (ENSCHYG00000012188) #10	TSSK6 (ENSCHYG00000012255) #11	GATAD2A (ENSCHYG00000012277) #12	MAU2 (ENSCHYG00000012428) #13	SUGP1 (ENSCHYG00000012677) #14	TM6SF2 (ENSCHYG00000012851) #15	HAPLN4 (ENSCHYG00000012901) #16	NCAN (ENSCHYG00000012951) #17	NR2C2AP (ENSCHYG00000013015) #18	RFXANK (ENSCHYG00000013090) #19	BORCS8 (ENSCHYG00000013210) #20	MEF2B (ENSCHYG00000013347) #21	TMEM161A (ENSCHYG00000013806) #22	SLC25A42 (ENSCHYG00000014137) #23	ARMC6 (ENSCHYG00000014214) #24	SUGP2 (ENSCHYG00000014360) #25	ENSCHYG00000014561 #26	DDX49 (ENSCHYG00000015448) #27	CERS1 (ENSCHYG00000015529) #29	GDF1 (ENSCHYG00000015658) #30	UPF1 (ENSCHYG00000015773) #31	COMP (ENSCHYG00000016040) #32	CRTC1 (ENSCHYG00000016471) #33	KLHL26 (ENSCHYG00000017020) #34	TMEM59L (ENSCHYG00000017122) #35	CRLF1 (ENSCHYG00000017284) #36	REX1BD (ENSCHYG00000017438) #37	UBA52 (ENSCHYG00000017560)
Percora_a	ANCESTRAL SPECIES		ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Bovidae	ANCESTRAL SPECIES		ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Bovinae	ANCESTRAL SPECIES	34	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Bos	ANCESTRAL SPECIES	34	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Bos_b	ANCESTRAL SPECIES	36	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Hybrid Bos Indicus	MODERN SPECIES	26	ATP13A1 (ENSBIXG00005011383)	GMIP (ENSBIXG00005011455)	LPAR2 (ENSBIXG00005011498) #7	PBX4 (ENSBIXG00005011533)	CILP2 (ENSBIXG00005011569) #8	GATAD2A (ENSBIXG00005011721) #12	MAU2 (ENSBIXG00005011825) #13	SUGP1 (ENSBIXG00005011882) #14	TM6SF2 (ENSBIXG00005011902) #15	HAPLN4 (ENSBIXG00005006424) #16	NCAN (ENSBIXG00005011939) #17	NR2C2AP (ENSBIXG00005011976) #18	RFXANK (ENSBIXG00005012032) #19	BORCS8 (ENSBIXG00005012065) #20	MEF2B (ENSBIXG00005012139) #21	TMEM161A (ENSBIXG00005007436) #22	SLC25A42 (ENSBIXG00005012191) #23	ARMC6 (ENSBIXG00005012220) #24	SUGP2 (ENSBIXG00005001278) #25	HOMER3 (ENSBIXG00005000373) #26	DDX49 (ENSBIXG00005012358) #27	COPE (ENSBIXG00005012672) #28	UPF1 (ENSBIXG00005012808) #31	COMP (ENSBIXG00005012859) #32	CRTC1 (ENSBIXG00005013032) #33	KLHL26 (ENSBIXG00005001500) #34	TMEM59L (ENSBIXG00005013127) #35	CRLF1 (ENSBIXG00005001505) #36	REX1BD (ENSBIXG00005013181) #37	ENSBIXG00005013215	FKBP8 (ENSBIXG00005001526)
Cow	MODERN SPECIES	26	PBX4 (ENSBTAG00000009975)	CILP2 (ENSBTAG00000014969) #8	YJEFN3 (ENSBTAG00000014968) #9	NDUFA13 (ENSBTAG00000007812) #10	TSSK6 (ENSBTAG00000006649) #11	GATAD2A (ENSBTAG00000003034) #12	MAU2 (ENSBTAG00000006124) #13	SUGP1 (ENSBTAG00000006116) #14	TM6SF2 (ENSBTAG00000016042) #15	HAPLN4 (ENSBTAG00000001765) #16	NCAN (ENSBTAG00000001764) #17	NR2C2AP (ENSBTAG00000001763) #18	RFXANK (ENSBTAG00000001762) #19	BORCS8 (ENSBTAG00000025817) #20	MEF2B (ENSBTAG00000001818) #21	TMEM161A (ENSBTAG00000001817) #22	SLC25A42 (ENSBTAG00000001816) #23	ARMC6 (ENSBTAG00000013291) #24	SUGP2 (ENSBTAG00000013288) #25	HOMER3 (ENSBTAG00000000813) #26	DDX49 (ENSBTAG00000000811) #27	COPE (ENSBTAG00000000810) #28	CERS1 (ENSBTAG00000037729) #29	GDF1 (ENSBTAG00000020923) #30	UPF1 (ENSBTAG00000020922) #31	COMP (ENSBTAG00000004630) #32	CRTC1 (ENSBTAG00000010379) #33	KLHL26 (ENSBTAG00000014114) #34	TMEM59L (ENSBTAG00000007698) #35	CRLF1 (ENSBTAG00000007741) #36	REX1BD (ENSBTAG00000007739) #37
Bos_a	ANCESTRAL SPECIES	29	ENSGT01050000244941.B.c #7	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37	ENSGT00940000153593.c.a
Domestic yak	MODERN SPECIES	27	PBX4 (ENSBGRG00000002159)	CILP2 (ENSBGRG00000002130) #8	YJEFN3 (ENSBGRG00000002015) #9	TSSK6 (ENSBGRG00000001976) #11	GATAD2A (ENSBGRG00000001936) #12	ENSBGRG00000001911	MAU2 (ENSBGRG00000001879) #13	SUGP1 (ENSBGRG00000001817) #14	TM6SF2 (ENSBGRG00000001786) #15	HAPLN4 (ENSBGRG00000001768) #16	NCAN (ENSBGRG00000001688) #17	NR2C2AP (ENSBGRG00000001646) #18	RFXANK (ENSBGRG00000001549) #19	ENSBGRG00000001503 #20	MEF2B (ENSBGRG00000001435) #21	TMEM161A (ENSBGRG00000001322) #22	SLC25A42 (ENSBGRG00000001293) #23	ARMC6 (ENSBGRG00000001271) #24	SUGP2 (ENSBGRG00000001227) #25	ENSBGRG00000001213 #26	HOMER3 (ENSBGRG00000001163) #26	DDX49 (ENSBGRG00000001122) #27	COPE (ENSBGRG00000001045) #28	CERS1 (ENSBGRG00000000977) #29	UPF1 (ENSBGRG00000000885) #31	COMP (ENSBGRG00000000772) #32	CRTC1 (ENSBGRG00000000542) #33	KLHL26 (ENSBGRG00000000466) #34	TMEM59L (ENSBGRG00000000427) #35	CRLF1 (ENSBGRG00000000399) #36	ENSBGRG00000026408 #37
Wild yak	MODERN SPECIES	984								SUGP1 (ENSBMUG00000014735) #14	TM6SF2 (ENSBMUG00000014742) #15	ENSBMUG00000014766 #16	NCAN (ENSBMUG00000014781) #17	NR2C2AP (ENSBMUG00000014819) #18	RFXANK (ENSBMUG00000014864) #19	BORCS8 (ENSBMUG00000014902) #20	MEF2B (ENSBMUG00000014926) #21	TMEM161A (ENSBMUG00000014965) #22	SLC25A42 (ENSBMUG00000014988) #23	ARMC6 (ENSBMUG00000015012) #24	SUGP2 (ENSBMUG00000015048) #25	HOMER3 (ENSBMUG00000015101) #26	DDX49 (ENSBMUG00000015132) #27	COPE (ENSBMUG00000015145) #28	CERS1 (ENSBMUG00000015159) #29	UPF1 (ENSBMUG00000015177) #31	COMP (ENSBMUG00000015225) #32	CRTC1 (ENSBMUG00000015292) #33	KLHL26 (ENSBMUG00000015350) #34	TMEM59L (ENSBMUG00000015381) #35	CRLF1 (ENSBMUG00000015427) #36	REX1BD (ENSBMUG00000015467) #37	UBA52 (ENSBMUG00000015499)
American bison	MODERN SPECIES	3165	PBX4 (ENSBBBG00000015984)	CILP2 (ENSBBBG00000015975) #8	YJEFN3 (ENSBBBG00000015957) #9	NDUFA13 (ENSBBBG00000015950) #10	TSSK6 (ENSBBBG00000015942) #11	GATAD2A (ENSBBBG00000015939) #12	MAU2 (ENSBBBG00000003961) #13	SUGP1 (ENSBBBG00000015892) #14	TM6SF2 (ENSBBBG00000015869) #15	HAPLN4 (ENSBBBG00000015855) #16	NCAN (ENSBBBG00000003940) #17	NR2C2AP (ENSBBBG00000003931) #18	RFXANK (ENSBBBG00000015745) #19	ENSBBBG00000015701 #20	MEF2B (ENSBBBG00000007138) #21	TMEM161A (ENSBBBG00000007455) #22	ARMC6 (ENSBBBG00000015629) #24	SUGP2 (ENSBBBG00000003426) #25	ENSBBBG00000003456 #26	ENSBBBG00000003467 #26	DDX49 (ENSBBBG00000015616) #27	COPE (ENSBBBG00000015595) #28	CERS1 (ENSBBBG00000015545) #29	UPF1 (ENSBBBG00000003867) #31	COMP (ENSBBBG00000002699) #32	CRTC1 (ENSBBBG00000015471) #33	ENSBBBG00000015461 #34	TMEM59L (ENSBBBG00000015452) #35	CRLF1 (ENSBBBG00000003846) #36	ENSBBBG00000015406 #37	ENSBBBG00000002734
Caprinae	ANCESTRAL SPECIES	32	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Rambouillet Sheep	MODERN SPECIES	21	GMIP (ENSOARG00020019185)	LPAR2 (ENSOARG00020019376) #7	CILP2 (ENSOARG00020019527) #8	YJEFN3 (ENSOARG00020019633) #9	NDUFA13 (ENSOARG00020019709) #10	TSSK6 (ENSOARG00020019749) #11	GATAD2A (ENSOARG00020019767) #12	MAU2 (ENSOARG00020019838) #13	SUGP1 (ENSOARG00020019993) #14	TM6SF2 (ENSOARG00020020089) #15	HAPLN4 (ENSOARG00020020166) #16	NR2C2AP (ENSOARG00020020240) #18	RFXANK (ENSOARG00020020308) #19	BORCS8 (ENSOARG00020020354) #20	MEF2B (ENSOARG00020020398) #21	TMEM161A (ENSOARG00020020857) #22	SLC25A42 (ENSOARG00020020909) #23	ARMC6 (ENSOARG00020020947) #24	SUGP2 (ENSOARG00020021040) #25	ENSOARG00020021129 #26	DDX49 (ENSOARG00020021548) #27	CERS1 (ENSOARG00020021615) #29	UPF1 (ENSOARG00020003352) #31	COMP (ENSOARG00020003569) #32	CRTC1 (ENSOARG00020003966) #33	KLHL26 (ENSOARG00020004115) #34	TMEM59L (ENSOARG00020004177) #35	CRLF1 (ENSOARG00020004211) #36	REX1BD (ENSOARG00020004269) #37	UBA52 (ENSOARG00020004308)	KXD1 (ENSOARG00020004349)
Goat	MODERN SPECIES	26	PBX4 (ENSCHIG00000020490)	CILP2 (ENSCHIG00000016599) #8	YJEFN3 (ENSCHIG00000022695) #9	NDUFA13 (ENSCHIG00000005106) #10	TSSK6 (ENSCHIG00000012857) #11	GATAD2A (ENSCHIG00000022449) #12	MAU2 (ENSCHIG00000018574) #13	SUGP1 (ENSCHIG00000024169) #14	TM6SF2 (ENSCHIG00000009497) #15	HAPLN4 (ENSCHIG00000017398) #16	NCAN (ENSCHIG00000023523) #17	NR2C2AP (ENSCHIG00000026754) #18	RFXANK (ENSCHIG00000009697) #19	BORCS8 (ENSCHIG00000023514) #20	MEF2B (ENSCHIG00000009022) #21	TMEM161A (ENSCHIG00000015703) #22	SLC25A42 (ENSCHIG00000017224) #23	ARMC6 (ENSCHIG00000022745) #24	SUGP2 (ENSCHIG00000000571) #25	HOMER3 (ENSCHIG00000013425) #26	DDX49 (ENSCHIG00000019910) #27	COPE (ENSCHIG00000019197) #28	CERS1 (ENSCHIG00000021209) #29	GDF1 (ENSCHIG00000026655) #30	UPF1 (ENSCHIG00000011018) #31	COMP (ENSCHIG00000015152) #32	CRTC1 (ENSCHIG00000020510) #33	KLHL26 (ENSCHIG00000009198) #34	TMEM59L (ENSCHIG00000001269) #35	CRLF1 (ENSCHIG00000014402) #36	REX1BD (ENSCHIG00000025942) #37
Siberian musk deer	MODERN SPECIES	1231	CILP2 (ENSMMSG00000017925) #8	YJEFN3 (ENSMMSG00000017864) #9	ENSMMSG00000017802 #10	TSSK6 (ENSMMSG00000017779) #11	ENSMMSG00000017748	GATAD2A (ENSMMSG00000017683) #12	MAU2 (ENSMMSG00000017598) #13	SUGP1 (ENSMMSG00000017541) #14	TM6SF2 (ENSMMSG00000017487) #15	HAPLN4 (ENSMMSG00000017463) #16	NCAN (ENSMMSG00000017015) #17	NR2C2AP (ENSMMSG00000016963) #18	RFXANK (ENSMMSG00000016859) #19	BORCS8 (ENSMMSG00000016823) #20	MEF2B (ENSMMSG00000016211) #21	TMEM161A (ENSMMSG00000016113) #22	SLC25A42 (ENSMMSG00000022673) #23	ARMC6 (ENSMMSG00000022659) #24	SUGP2 (ENSMMSG00000022643) #25	HOMER3 (ENSMMSG00000022598) #26	DDX49 (ENSMMSG00000022565) #27	COPE (ENSMMSG00000022538) #28	CERS1 (ENSMMSG00000022516) #29	GDF1 (ENSMMSG00000022528) #30	UPF1 (ENSMMSG00000022501) #31	COMP (ENSMMSG00000022327) #32	CRTC1 (ENSMMSG00000022161) #33	KLHL26 (ENSMMSG00000022113) #34	TMEM59L (ENSMMSG00000022096) #35	CRLF1 (ENSMMSG00000022062) #36	REX1BD (ENSMMSG00000022031) #37
Camelidae	ANCESTRAL SPECIES	64	ENSGT01050000244941.B.c #7	ENSGT00940000162643.a	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37	ENSGT00530000064192.r
Arabian camel	MODERN SPECIES	14	LPAR2 (ENSCDRG00005011318) #7	PBX4 (ENSCDRG00005011358)	CILP2 (ENSCDRG00005011464) #8	YJEFN3 (ENSCDRG00005011508) #9	TSSK6 (ENSCDRG00005011623) #11	GATAD2A (ENSCDRG00005011647) #12	MAU2 (ENSCDRG00005011821) #13	SUGP1 (ENSCDRG00005011946) #14	TM6SF2 (ENSCDRG00005012037) #15	HAPLN4 (ENSCDRG00005012163) #16	NCAN (ENSCDRG00005012212) #17	NR2C2AP (ENSCDRG00005012299) #18	RFXANK (ENSCDRG00005012616) #19	ENSCDRG00005012691 #20	MEF2B (ENSCDRG00005012755) #21	TMEM161A (ENSCDRG00005012779) #22	SLC25A42 (ENSCDRG00005012927) #23	ARMC6 (ENSCDRG00005012979) #24	SUGP2 (ENSCDRG00005013031) #25	HOMER3 (ENSCDRG00005013258) #26	DDX49 (ENSCDRG00005013373) #27	COPE (ENSCDRG00005013441) #28	CERS1 (ENSCDRG00005013600) #29	UPF1 (ENSCDRG00005008931) #31	COMP (ENSCDRG00005009080) #32	CRTC1 (ENSCDRG00005009334) #33	KLHL26 (ENSCDRG00005009944) #34	TMEM59L (ENSCDRG00005009996) #35	CRLF1 (ENSCDRG00005010053) #36	REX1BD (ENSCDRG00005010167) #37	UBA52 (ENSCDRG00005010272)
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00390000007227.b #9	ENSGT00960000189525	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT01090000261752	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Carnivora	ANCESTRAL SPECIES	6	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00960000189525	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Caniformia	ANCESTRAL SPECIES	4	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00960000189525	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Ursidae	ANCESTRAL SPECIES	11	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Ursus	ANCESTRAL SPECIES	5	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
American black bear	MODERN SPECIES		CILP2 (ENSUAMG00000000697) #8	YJEFN3 (ENSUAMG00000000690) #9	NDUFA13 (ENSUAMG00000000686) #10	TSSK6 (ENSUAMG00000000680) #11	GATAD2A (ENSUAMG00000000666) #12	ENSUAMG00000000653 #14	MAU2 (ENSUAMG00000000016) #13	SUGP1 (ENSUAMG00000000010) #14	TM6SF2 (ENSUAMG00000000009) #15	HAPLN4 (ENSUAMG00000000008) #16	NCAN (ENSUAMG00000000007) #17	NR2C2AP (ENSUAMG00000000006) #18	RFXANK (ENSUAMG00000000005) #19	BORCS8 (ENSUAMG00000000004) #20	MEF2B (ENSUAMG00000000003) #21	TMEM161A (ENSUAMG00000000002) #22	SLC25A42 (ENSUAMG00000000001) #23
Polar bear	MODERN SPECIES	255	GMIP (ENSUMAG00000006087)	LPAR2 (ENSUMAG00000006117) #7	PBX4 (ENSUMAG00000006125)	ENSUMAG00000006179 #9	NDUFA13 (ENSUMAG00000006183) #10	TSSK6 (ENSUMAG00000006185) #11	GATAD2A (ENSUMAG00000006192) #12	MAU2 (ENSUMAG00000006229) #13	SUGP1 (ENSUMAG00000006358) #14	TM6SF2 (ENSUMAG00000006368) #15	NCAN (ENSUMAG00000006378) #17	NR2C2AP (ENSUMAG00000006411) #18	RFXANK (ENSUMAG00000006419) #19	BORCS8 (ENSUMAG00000006425) #20	MEF2B (ENSUMAG00000006437) #21	TMEM161A (ENSUMAG00000006455) #22	SLC25A42 (ENSUMAG00000006458) #23	ARMC6 (ENSUMAG00000006462) #24	SUGP2 (ENSUMAG00000006467) #25	HOMER3 (ENSUMAG00000006477) #26	DDX49 (ENSUMAG00000006489) #27	COPE (ENSUMAG00000006505) #28	UPF1 (ENSUMAG00000006652) #31	COMP (ENSUMAG00000007436) #32	CRTC1 (ENSUMAG00000008860) #33	ENSUMAG00000008937	ENSUMAG00000008945 #37	UBA52 (ENSUMAG00000008953)	KXD1 (ENSUMAG00000008955)	FKBP8 (ENSUMAG00000008964)	ELL (ENSUMAG00000008994)
Giant Panda	MODERN SPECIES	14	PBX4 (ENSAMEG00000011909)	CILP2 (ENSAMEG00000011906) #8	YJEFN3 (ENSAMEG00000030667) #9	NDUFA13 (ENSAMEG00000011893) #10	TSSK6 (ENSAMEG00000019351) #11	GATAD2A (ENSAMEG00000011882) #12	MAU2 (ENSAMEG00000011868) #13	SUGP1 (ENSAMEG00000011838) #14	TM6SF2 (ENSAMEG00000011811) #15	HAPLN4 (ENSAMEG00000027731) #16	NCAN (ENSAMEG00000011734) #17	NR2C2AP (ENSAMEG00000011727) #18	RFXANK (ENSAMEG00000011703) #19	BORCS8 (ENSAMEG00000011698) #20	MEF2B (ENSAMEG00000011682) #21	TMEM161A (ENSAMEG00000011655) #22	SLC25A42 (ENSAMEG00000027218) #23	ARMC6 (ENSAMEG00000011621) #24	SUGP2 (ENSAMEG00000011613) #25	HOMER3 (ENSAMEG00000011595) #26	DDX49 (ENSAMEG00000011566) #27	COPE (ENSAMEG00000011524) #28	CERS1 (ENSAMEG00000011517) #29	UPF1 (ENSAMEG00000011474) #31	COMP (ENSAMEG00000011419) #32	CRTC1 (ENSAMEG00000011390) #33	KLHL26 (ENSAMEG00000011385) #34	TMEM59L (ENSAMEG00000011379) #35	CRLF1 (ENSAMEG00000011375) #36	REX1BD (ENSAMEG00000011371) #37	UBA52 (ENSAMEG00000011356)
Mustelinae	ANCESTRAL SPECIES	10	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
American mink	MODERN SPECIES	58	PBX4 (ENSNVIG00000020863)	CILP2 (ENSNVIG00000020847) #8	YJEFN3 (ENSNVIG00000020838) #9	NDUFA13 (ENSNVIG00000020832) #10	TSSK6 (ENSNVIG00000020829) #11	GATAD2A (ENSNVIG00000020782) #12	MAU2 (ENSNVIG00000020762) #13	SUGP1 (ENSNVIG00000020747) #14	TM6SF2 (ENSNVIG00000020733) #15	HAPLN4 (ENSNVIG00000020713) #16	NCAN (ENSNVIG00000020377) #17	NR2CA (ENSNVIG00000020303) #18	RFXANK (ENSNVIG00000020264) #19	BORCS8 (ENSNVIG00000020221) #20	MEF2B (ENSNVIG00000020206) #21	TMEM161A (ENSNVIG00000020180) #22	S2542 (ENSNVIG00000020166) #23	ARMC6 (ENSNVIG00000020143) #24	SUGP2 (ENSNVIG00000020116) #25	HOMER3 (ENSNVIG00000020032) #26	DDX49 (ENSNVIG00000020003) #27	COPE (ENSNVIG00000019958) #28	CERS1 (ENSNVIG00000019939) #29	GDF1 (ENSNVIG00000019930) #30	UPF1 (ENSNVIG00000019863) #31	COMP (ENSNVIG00000018415) #32	CRTC1 (ENSNVIG00000018294) #33	KLHL26 (ENSNVIG00000018276) #34	TMEM59L (ENSNVIG00000018259) #35	CRLF1 (ENSNVIG00000018244) #36	REX1BD (ENSNVIG00000018234) #37
Ferret	MODERN SPECIES	238	LPAR2 (ENSMPUG00000015364) #7	PBX4 (ENSMPUG00000015365)	CILP2 (ENSMPUG00000015383) #8	YJEFN3 (ENSMPUG00000015390) #9	TSSK6 (ENSMPUG00000019662) #11	GATAD2A (ENSMPUG00000015399) #12	MAU2 (ENSMPUG00000015402) #13	SUGP1 (ENSMPUG00000015404) #14	TM6SF2 (ENSMPUG00000015407) #15	HAPLN4 (ENSMPUG00000015424) #16	NCAN (ENSMPUG00000015433) #17	NR2C2AP (ENSMPUG00000015462) #18	RFXANK (ENSMPUG00000015469) #19	BORCS8 (ENSMPUG00000015471) #20	MEF2B (ENSMPUG00000015473) #21	TMEM161A (ENSMPUG00000015475) #22	SLC25A42 (ENSMPUG00000015477) #23	SUGP2 (ENSMPUG00000015478) #25	HOMER3 (ENSMPUG00000015484) #26	DDX49 (ENSMPUG00000015485) #27	COPE (ENSMPUG00000015486) #28	CERS1 (ENSMPUG00000015497) #29	GDF1 (ENSMPUG00000015514) #30	UPF1 (ENSMPUG00000015516) #31	COMP (ENSMPUG00000015518) #32	CRTC1 (ENSMPUG00000015520) #33	KLHL26 (ENSMPUG00000015521) #34	TMEM59L (ENSMPUG00000015522) #35	CRLF1 (ENSMPUG00000015524) #36	REX1BD (ENSMPUG00000015526) #37	ENSMPUG00000015527
Canidae	ANCESTRAL SPECIES		ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00960000189525	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478.b #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Red fox	MODERN SPECIES	5	PBX4 (ENSVVUG00000007478)	CILP2 (ENSVVUG00000007489) #8	YJEFN3 (ENSVVUG00000007502) #9	NDUFA13 (ENSVVUG00000007513) #10	TSSK6 (ENSVVUG00000007516) #11	GATAD2A (ENSVVUG00000007522) #12	MAU2 (ENSVVUG00000007527) #13	SUGP1 (ENSVVUG00000007569) #14	TM6SF2 (ENSVVUG00000007584) #15	HAPLN4 (ENSVVUG00000007594) #16	NCAN (ENSVVUG00000007597) #17	NR2C2AP (ENSVVUG00000007609) #18	RFXANK (ENSVVUG00000007633) #19	BORCS8 (ENSVVUG00000007667) #20	MEF2B (ENSVVUG00000007672) #21	TMEM161A (ENSVVUG00000007683) #22	SLC25A42 (ENSVVUG00000007728) #23	ARMC6 (ENSVVUG00000007731) #24	SUGP2 (ENSVVUG00000007744) #25	HOMER3 (ENSVVUG00000007758) #26	DDX49 (ENSVVUG00000007767) #27	ENSVVUG00000007777 #28	CERS1 (ENSVVUG00000007783) #29	UPF1 (ENSVVUG00000007797) #31	ENSVVUG00000007818 #32	CRTC1 (ENSVVUG00000007833) #33	KLHL26 (ENSVVUG00000007964) #34	TMEM59L (ENSVVUG00000007974) #35	CRLF1 (ENSVVUG00000007976) #36	REX1BD (ENSVVUG00000007980) #37	UBA52 (ENSVVUG00000007989)
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00960000189525	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478.b #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Dingo	MODERN SPECIES	112	CILP2 (ENSCAFG00020012728) #8	YJEFN3 (ENSCAFG00020012724) #9	ENSCAFG00020012723	NDUFA13 (ENSCAFG00020012721) #10	TSSK6 (ENSCAFG00020012717) #11	GATAD2A (ENSCAFG00020012715) #12	MAU2 (ENSCAFG00020012543) #13	SUGP1 (ENSCAFG00020012508) #14	TM6SF2 (ENSCAFG00020012504) #15	HAPLN4 (ENSCAFG00020012500) #16	NCAN (ENSCAFG00020012454) #17	NR2C2AP (ENSCAFG00020012443) #18	RFXANK (ENSCAFG00020012437) #19	BORCS8 (ENSCAFG00020012435) #20	MEF2B (ENSCAFG00020012425) #21	TMEM161A (ENSCAFG00020012412) #22	SLC25A42 (ENSCAFG00020012408) #23	ARMC6 (ENSCAFG00020012404) #24	SUGP2 (ENSCAFG00020012392) #25	HOMER3 (ENSCAFG00020012389) #26	DDX49 (ENSCAFG00020012375) #27	COPE (ENSCAFG00020012363) #28	CERS1 (ENSCAFG00020012351) #29	GDF1 (ENSCAFG00020012350) #30	UPF1 (ENSCAFG00020012347) #31	COMP (ENSCAFG00020012328) #32	CRTC1 (ENSCAFG00020012293) #33	KLHL26 (ENSCAFG00020012290) #34	TMEM59L (ENSCAFG00020012289) #35	CRLF1 (ENSCAFG00020012282) #36	REX1BD (ENSCAFG00020012279) #37
Dog	MODERN SPECIES	12	PBX4 (ENSCAFG00845014230)	CILP2 (ENSCAFG00845014273) #8	YJEFN3 (ENSCAFG00845014306) #9	NDUFA13 (ENSCAFG00845014336) #10	TSSK6 (ENSCAFG00845014349) #11	GATAD2A (ENSCAFG00845014383) #12	MAU2 (ENSCAFG00845014470) #13	SUGP1 (ENSCAFG00845014514) #14	TM6SF2 (ENSCAFG00845014561) #15	HAPLN4 (ENSCAFG00845014588) #16	NCAN (ENSCAFG00845014625) #17	RFXANK (ENSCAFG00845014775) #19	NR2C2AP (ENSCAFG00845018085) #18	BORCS8 (ENSCAFG00845018185) #20	MEF2B (ENSCAFG00845018253) #21	TMEM161A (ENSCAFG00845018423) #22	SLC25A42 (ENSCAFG00845018653) #23	ARMC6 (ENSCAFG00845018765) #24	SUGP2 (ENSCAFG00845018888) #25	HOMER3 (ENSCAFG00845019115) #26	DDX49 (ENSCAFG00845019266) #27	COPE (ENSCAFG00845019400) #28	CERS1 (ENSCAFG00845019662) #29	GDF1 (ENSCAFG00845019828) #30	UPF1 (ENSCAFG00845019866) #31	COMP (ENSCAFG00845020025) #32	ENSCAFG00845020236 #35	CRTC1 (ENSCAFG00845020362) #33	KLHL26 (ENSCAFG00845020669) #34	CRLF1 (ENSCAFG00845020775) #36	ENSCAFG00845020838 #37
Felidae	ANCESTRAL SPECIES	17	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00910000147684
lion	MODERN SPECIES	2	PBX4 (ENSPLOG00000001560)	CILP2 (ENSPLOG00000001532) #8	YJEFN3 (ENSPLOG00000001517) #9	NDUFA13 (ENSPLOG00000001502) #10	TSSK6 (ENSPLOG00000001493) #11	GATAD2A (ENSPLOG00000001463) #12	MAU2 (ENSPLOG00000001424) #13	SUGP1 (ENSPLOG00000001334) #14	TM6SF2 (ENSPLOG00000001308) #15	HAPLN4 (ENSPLOG00000001286) #16	NCAN (ENSPLOG00000001120) #17	ENSPLOG00000000980 #18	RFXANK (ENSPLOG00000000919) #19	BORCS8 (ENSPLOG00000000887) #20	MEF2B (ENSPLOG00000000863) #21	TMEM161A (ENSPLOG00000000833) #22	SLC25A42 (ENSPLOG00000000808) #23	ARMC6 (ENSPLOG00000000792) #24	SUGP2 (ENSPLOG00000000772) #25	HOMER3 (ENSPLOG00000000722) #26	DDX49 (ENSPLOG00000000667) #27	COPE (ENSPLOG00000000628) #28	CERS1 (ENSPLOG00000000599) #29	GDF1 (ENSPLOG00000000580) #30	UPF1 (ENSPLOG00000000562) #31	COMP (ENSPLOG00000000492) #32	CRTC1 (ENSPLOG00000000409) #33	KLHL26 (ENSPLOG00000000360) #34	TMEM59L (ENSPLOG00000000339) #35	CRLF1 (ENSPLOG00000000319) #36	ENSPLOG00000000303
leopard	MODERN SPECIES	68	LPAR2 (ENSPPRG00000018123) #7	PBX4 (ENSPPRG00000020424)	CILP2 (ENSPPRG00000023737) #8	YJEFN3 (ENSPPRG00000023619) #9	NDUFA13 (ENSPPRG00000022807) #10	TSSK6 (ENSPPRG00000016235) #11	GATAD2A (ENSPPRG00000000270) #12	MAU2 (ENSPPRG00000000643) #13	SUGP1 (ENSPPRG00000000880) #14	TM6SF2 (ENSPPRG00000001208) #15	HAPLN4 (ENSPPRG00000001581) #16	NR2C2AP (ENSPPRG00000003111) #18	RFXANK (ENSPPRG00000004266) #19	BORCS8 (ENSPPRG00000004580) #20	MEF2B (ENSPPRG00000006317) #21	TMEM161A (ENSPPRG00000008638) #22	SLC25A42 (ENSPPRG00000008936) #23	ARMC6 (ENSPPRG00000009582) #24	SUGP2 (ENSPPRG00000010924) #25	HOMER3 (ENSPPRG00000013004) #26	DDX49 (ENSPPRG00000013274) #27	COPE (ENSPPRG00000019668) #28	CERS1 (ENSPPRG00000021419) #29	GDF1 (ENSPPRG00000024438) #30	UPF1 (ENSPPRG00000023470) #31	COMP (ENSPPRG00000000723) #32	CRTC1 (ENSPPRG00000001977) #33	KLHL26 (ENSPPRG00000003359) #34	TMEM59L (ENSPPRG00000003959) #35	CRLF1 (ENSPPRG00000004235) #36	REX1BD (ENSPPRG00000004571) #37
Tiger	MODERN SPECIES	281	LPAR2 (ENSPTIG00000013412) #7	PBX4 (ENSPTIG00000013405)	CILP2 (ENSPTIG00000013349) #8	YJEFN3 (ENSPTIG00000013321) #9	NDUFA13 (ENSPTIG00000013303) #10	TSSK6 (ENSPTIG00000006514) #11	GATAD2A (ENSPTIG00000013272) #12	MAU2 (ENSPTIG00000013179) #13	SUGP1 (ENSPTIG00000013061) #14	TM6SF2 (ENSPTIG00000013026) #15	HAPLN4 (ENSPTIG00000013017) #16	NR2C2AP (ENSPTIG00000012962) #18	RFXANK (ENSPTIG00000012655) #19	BORCS8 (ENSPTIG00000012610) #20	MEF2B (ENSPTIG00000012475) #21	TMEM161A (ENSPTIG00000012395) #22	SLC25A42 (ENSPTIG00000012354) #23	ARMC6 (ENSPTIG00000012073) #24	SUGP2 (ENSPTIG00000012003) #25	HOMER3 (ENSPTIG00000011533) #26	DDX49 (ENSPTIG00000011259) #27	COPE (ENSPTIG00000010957) #28	CERS1 (ENSPTIG00000010849) #29	GDF1 (ENSPTIG00000010670) #30	UPF1 (ENSPTIG00000010159) #31	ENSPTIG00000010043 #32	CRTC1 (ENSPTIG00000009427) #33	ENSPTIG00000009351 #34	ENSPTIG00000009230 #34	TMEM59L (ENSPTIG00000009187) #35	CRLF1 (ENSPTIG00000009041) #36
Cat	MODERN SPECIES	1	LPAR2 (ENSFCAG00000014538) #7	PBX4 (ENSFCAG00000014536)	CILP2 (ENSFCAG00000014331) #8	YJEFN3 (ENSFCAG00000014330) #9	NDUFA13 (ENSFCAG00000014329) #10	TSSK6 (ENSFCAG00000014328) #11	GATAD2A (ENSFCAG00000014327) #12	MAU2 (ENSFCAG00000009780) #13	SUGP1 (ENSFCAG00000009779) #14	HAPLN4 (ENSFCAG00000022898) #16	NCAN (ENSFCAG00000008376) #17	NR2C2AP (ENSFCAG00000009777) #18	RFXANK (ENSFCAG00000009775) #19	BORCS8 (ENSFCAG00000047348) #20	MEF2B (ENSFCAG00000009774) #21	TMEM161A (ENSFCAG00000009771) #22	SLC25A42 (ENSFCAG00000009770) #23	ARMC6 (ENSFCAG00000009767) #24	SUGP2 (ENSFCAG00000009765) #25	HOMER3 (ENSFCAG00000009762) #26	DDX49 (ENSFCAG00000009760) #27	CERS1 (ENSFCAG00000023920) #28	UPF1 (ENSFCAG00000009757) #31	COMP (ENSFCAG00000009754) #32	CRTC1 (ENSFCAG00000009752) #33	KLHL26 (ENSFCAG00000042696) #34	TMEM59L (ENSFCAG00000009749) #35	CRLF1 (ENSFCAG00000009747) #36	ENSFCAG00000033106	REX1BD (ENSFCAG00000024240) #37	UBA52 (ENSFCAG00000009745)
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT01090000261752	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Equus	ANCESTRAL SPECIES	23	ENSGT01050000244941.B.c #7	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00940000160464 #11	ENSGT01090000261752	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Horse	MODERN SPECIES	13	LPAR2 (ENSECAG00000009148) #7	ENSECAG00000044009	CILP2 (ENSECAG00000000250) #8	YJEFN3 (ENSECAG00000018123) #9	TSSK6 (ENSECAG00000051056) #11	ENSECAG00000017590	GATAD2A (ENSECAG00000012875) #12	MAU2 (ENSECAG00000001359) #13	SUGP1 (ENSECAG00000013871) #14	HAPLN4 (ENSECAG00000020045) #16	NCAN (ENSECAG00000016115) #17	NR2C2AP (ENSECAG00000015219) #18	RFXANK (ENSECAG00000009442) #19	BORCS8 (ENSECAG00000007592) #20	MEF2B (ENSECAG00000022642) #21	TMEM161A (ENSECAG00000013963) #22	SLC25A42 (ENSECAG00000011367) #23	ARMC6 (ENSECAG00000006428) #24	SUGP2 (ENSECAG00000000129) #25	HOMER3 (ENSECAG00000023105) #26	DDX49 (ENSECAG00000012194) #27	COPE (ENSECAG00000024390) #28	CERS1 (ENSECAG00000052582) #29	GDF1 (ENSECAG00000026851) #30	UPF1 (ENSECAG00000010639) #31	COMP (ENSECAG00000000336) #32	CRTC1 (ENSECAG00000012748) #33	KLHL26 (ENSECAG00000046223) #34	TMEM59L (ENSECAG00000000133) #35	REX1BD (ENSECAG00000021433) #37	UBA52 (ENSECAG00000020660)
Donkey	MODERN SPECIES		LPAR2 (ENSEASG00005031542) #7	ENSEASG00005033171	CILP2 (ENSEASG00005006616) #8	YJEFN3 (ENSEASG00005006613) #9	ENSEASG00005028100	TSSK6 (ENSEASG00005006607) #11	GATAD2A (ENSEASG00005006602) #12	MAU2 (ENSEASG00005006596) #13	SUGP1 (ENSEASG00005006593) #14	HAPLN4 (ENSEASG00005006590) #16	NCAN (ENSEASG00005006587) #17	NR2C2AP (ENSEASG00005027263) #18	RFXANK (ENSEASG00005006582) #19	BORCS8 (ENSEASG00005006580) #20	MEF2B (ENSEASG00005006578) #21	TMEM161A (ENSEASG00005006575) #22	SLC25A42 (ENSEASG00005006570) #23	ARMC6 (ENSEASG00005006568) #24	SUGP2 (ENSEASG00005006565) #25	HOMER3 (ENSEASG00005006562) #26	DDX49 (ENSEASG00005006560) #27	COPE (ENSEASG00005006557) #28	CERS1 (ENSEASG00005030456) #29	GDF1 (ENSEASG00005029430) #30	UPF1 (ENSEASG00005006549) #31	COMP (ENSEASG00005006320) #32	CRTC1 (ENSEASG00005006280) #33	KLHL26 (ENSEASG00005006276) #34	TMEM59L (ENSEASG00005006274) #35	CRLF1 (ENSEASG00005006270) #36	ENSEASG00005025213 #37
Chiroptera	ANCESTRAL SPECIES	44	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Microchiroptera	ANCESTRAL SPECIES	43	ENSGT00940000162643	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Greater horseshoe bat	MODERN SPECIES	9	PBX4 (ENSRFEG00010006894)	CILP2 (ENSRFEG00010006782) #8	YJEFN3 (ENSRFEG00010006740) #9	NDUFA13 (ENSRFEG00010006692) #10	TSSK6 (ENSRFEG00010006656) #11	GATAD2A (ENSRFEG00010006588) #12	MAU2 (ENSRFEG00010006479) #13	SUGP1 (ENSRFEG00010006391) #14	TM6SF2 (ENSRFEG00010006340) #15	HAPLN4 (ENSRFEG00010006311) #16	NCAN (ENSRFEG00010006275) #17	NR2C2AP (ENSRFEG00010006230) #18	RFXANK (ENSRFEG00010006139) #19	BORCS8 (ENSRFEG00010006052) #20	MEF2B (ENSRFEG00010005974) #21	TMEM161A (ENSRFEG00010005885) #22	SLC25A42 (ENSRFEG00010005823) #23	ARMC6 (ENSRFEG00010005797) #24	SUGP2 (ENSRFEG00010005746) #25	HOMER3 (ENSRFEG00010005693) #26	DDX49 (ENSRFEG00010005585) #27	CERS1 (ENSRFEG00010005439) #29	GDF1 (ENSRFEG00010020888) #30	UPF1 (ENSRFEG00010020838) #31	COMP (ENSRFEG00010020665) #32	CRTC1 (ENSRFEG00010020465) #33	KLHL26 (ENSRFEG00010020386) #34	TMEM59L (ENSRFEG00010020368) #35	CRLF1 (ENSRFEG00010020301) #36	ENSRFEG00010020261 #37	KXD1 (ENSRFEG00010020232)
Microbat	MODERN SPECIES	1248	LPAR2 (ENSMLUG00000007886) #7	CILP2 (ENSMLUG00000017369) #8	YJEFN3 (ENSMLUG00000017368) #9	NDUFA13 (ENSMLUG00000017367) #10	TSSK6 (ENSMLUG00000017365) #11	GATAD2A (ENSMLUG00000017364) #12	MAU2 (ENSMLUG00000017362) #13	SUGP1 (ENSMLUG00000017360) #14	TM6SF2 (ENSMLUG00000027634) #15	HAPLN4 (ENSMLUG00000017358) #16	NCAN (ENSMLUG00000017356) #17	NR2C2AP (ENSMLUG00000017355) #18	RFXANK (ENSMLUG00000017354) #19	BORCS8 (ENSMLUG00000025095) #20	MEF2B (ENSMLUG00000003299) #21	TMEM161A (ENSMLUG00000017352) #22	SLC25A42 (ENSMLUG00000012208) #23	ENSMLUG00000012203 #24	SUGP2 (ENSMLUG00000012189) #25	ENSMLUG00000025755	HOMER3 (ENSMLUG00000012170) #26	DDX49 (ENSMLUG00000012159) #27	COPE (ENSMLUG00000012147) #28	ENSMLUG00000026905 #29	ENSMLUG00000012140 #30	UPF1 (ENSMLUG00000012122) #31	COMP (ENSMLUG00000012249) #32	CRTC1 (ENSMLUG00000012234) #33	KLHL26 (ENSMLUG00000003470) #34	ENSMLUG00000028871	CRLF1 (ENSMLUG00000002437) #36
Megabat	MODERN SPECIES	1689																TMEM161A (ENSPVAG00000005055) #22	SLC25A42 (ENSPVAG00000005053) #23	ARMC6 (ENSPVAG00000005049) #24	SUGP2 (ENSPVAG00000005047) #25