Glires	ANCESTRAL SPECIES	21	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT01090000261752	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Rodentia_B	ANCESTRAL SPECIES	37	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Myomorpha	ANCESTRAL SPECIES	43	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Muroidea	ANCESTRAL SPECIES	47	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Muroidea_A	ANCESTRAL SPECIES	28	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Cricetidae	ANCESTRAL SPECIES	30	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Cricetidae_B	ANCESTRAL SPECIES	17	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Prairie vole	MODERN SPECIES	164	Pbx4 (ENSMOCG00000001326) #7	Cilp2 (ENSMOCG00000018051) #8	Yjefn3 (ENSMOCG00000019664) #9	Ndufa13 (ENSMOCG00000015070) #10	Tssk6 (ENSMOCG00000007466) #11	Gatad2a (ENSMOCG00000001060) #12	Mau2 (ENSMOCG00000003213) #13	Sugp1 (ENSMOCG00000014670) #14	Tm6sf2 (ENSMOCG00000018885) #15	Hapln4 (ENSMOCG00000000353) #16	Ncan (ENSMOCG00000020207) #17	Nr2c2ap (ENSMOCG00000003423) #18	Rfxank (ENSMOCG00000021751) #19	ENSMOCG00000008996 #20	Mef2b (ENSMOCG00000000308) #21	Tmem161a (ENSMOCG00000018852) #22	Slc25a42 (ENSMOCG00000012570) #23	Armc6 (ENSMOCG00000014288) #24	Sugp2 (ENSMOCG00000009704) #25	Homer3 (ENSMOCG00000013590) #26	Ddx49 (ENSMOCG00000018690) #27	Cope (ENSMOCG00000014940) #28	ENSMOCG00000004861 #29	ENSMOCG00000000275 #30	Upf1 (ENSMOCG00000005699) #31	Comp (ENSMOCG00000004567) #32	Crtc1 (ENSMOCG00000005553) #33	Klhl26 (ENSMOCG00000017635) #34	Tmem59l (ENSMOCG00000010649) #35	Crlf1 (ENSMOCG00000007746) #36	Rex1bd (ENSMOCG00000014306) #37
Northern American deer mouse	MODERN SPECIES	8	Pbx4 (ENSPEMG00000010841) #7	Cilp2 (ENSPEMG00000008010) #8	Yjefn3 (ENSPEMG00000011764) #9	Ndufa13 (ENSPEMG00000007743) #10	Tssk6 (ENSPEMG00000007183) #11	Gatad2a (ENSPEMG00000012515) #12	Mau2 (ENSPEMG00000016559) #13	Sugp1 (ENSPEMG00000009253) #14	Tm6sf2 (ENSPEMG00000016397) #15	Hapln4 (ENSPEMG00000029211) #16	Ncan (ENSPEMG00000012564) #17	Nr2c2ap (ENSPEMG00000001962) #18	Rfxank (ENSPEMG00000007761) #19	Borcs8 (ENSPEMG00000010340) #20	Mef2b (ENSPEMG00000018054) #21	Tmem161a (ENSPEMG00000016451) #22	Slc25a42 (ENSPEMG00000011354) #23	Armc6 (ENSPEMG00000012468) #24	Sugp2 (ENSPEMG00000009700) #25	Homer3 (ENSPEMG00000016382) #26	Ddx49 (ENSPEMG00000009238) #27	Cope (ENSPEMG00000018557) #28	ENSPEMG00000012430 #29	ENSPEMG00000029913 #30	Upf1 (ENSPEMG00000001085) #31	Comp (ENSPEMG00000019103) #32	Crtc1 (ENSPEMG00000005110) #33	Klhl26 (ENSPEMG00000016863) #34	Tmem59l (ENSPEMG00000014170) #35	Crlf1 (ENSPEMG00000010464) #36	Rex1bd (ENSPEMG00000017857) #37
Cricetinae	ANCESTRAL SPECIES	36	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Chinese hamster chok1gshd	MODERN SPECIES	184	Pbx4 (ENSCGRG00001014693) #7	Cilp2 (ENSCGRG00001007338) #8	Yjefn3 (ENSCGRG00001023789) #9	Ndufa13 (ENSCGRG00001022785) #10	Tssk6 (ENSCGRG00001010147) #11	Gatad2a (ENSCGRG00001018413) #12	Mau2 (ENSCGRG00001009180) #13	Sugp1 (ENSCGRG00001021250) #14	Tm6sf2 (ENSCGRG00001019424) #15	Hapln4 (ENSCGRG00001018509) #16	Ncan (ENSCGRG00001015055) #17	Nr2c2ap (ENSCGRG00001011302) #18	Rfxank (ENSCGRG00001000782) #19	Borcs8 (ENSCGRG00001020163) #20	Mef2b (ENSCGRG00001014460) #21	Tmem161a (ENSCGRG00001022808) #22	Slc25a42 (ENSCGRG00001022045) #23	Armc6 (ENSCGRG00001019296) #24	Sugp2 (ENSCGRG00001018264) #25	Homer3 (ENSCGRG00001014952) #26	Ddx49 (ENSCGRG00001009467) #27	COPE (ENSCGRG00001024248) #28	ENSCGRG00001019774 #29	ENSCGRG00001006921 #30	Upf1 (ENSCGRG00001021067) #31	Comp (ENSCGRG00001009171) #32	Crtc1 (ENSCGRG00001002202) #33	Klhl26 (ENSCGRG00001020014) #34	Tmem59l (ENSCGRG00001018799) #35	Crlf1 (ENSCGRG00001017905) #36	Rex1bd (ENSCGRG00001023832) #37
Golden Hamster	MODERN SPECIES	831	Pbx4 (ENSMAUG00000000855) #7	Cilp2 (ENSMAUG00000005034) #8	Yjefn3 (ENSMAUG00000021666) #9	Ndufa13 (ENSMAUG00000019158) #10	Tssk6 (ENSMAUG00000008397) #11	Gatad2a (ENSMAUG00000021128) #12	Mau2 (ENSMAUG00000021335) #13	Sugp1 (ENSMAUG00000016683) #14	Tm6sf2 (ENSMAUG00000001556) #15	Hapln4 (ENSMAUG00000011983) #16	Ncan (ENSMAUG00000007276) #17	Nr2c2ap (ENSMAUG00000003921) #18	Rfxank (ENSMAUG00000002477) #19	Borcs8 (ENSMAUG00000014785) #20	Mef2b (ENSMAUG00000006774) #21	Tmem161a (ENSMAUG00000011694) #22	Slc25a42 (ENSMAUG00000018082) #23	Armc6 (ENSMAUG00000011324) #24	Sugp2 (ENSMAUG00000011371) #25	Homer3 (ENSMAUG00000014150) #26	Ddx49 (ENSMAUG00000010235) #27	Cope (ENSMAUG00000016322) #28	ENSMAUG00000011350 #29	ENSMAUG00000012872 #30	Upf1 (ENSMAUG00000011398) #31	Comp (ENSMAUG00000010602) #32	Crtc1 (ENSMAUG00000019225) #33	Klhl26 (ENSMAUG00000021352) #34	Tmem59l (ENSMAUG00000006146) #35	Crlf1 (ENSMAUG00000021052) #36	Rex1bd (ENSMAUG00000015830) #37
Murinae	ANCESTRAL SPECIES	23	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Mus	ANCESTRAL SPECIES	6	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Steppe mouse	MODERN SPECIES	2734	Pbx4 (ENSMSIG00000032030) #7	Cilp2 (ENSMSIG00000032031) #8	Yjefn3 (ENSMSIG00000032032) #9	Ndufa13 (ENSMSIG00000032033) #10	Tssk6 (ENSMSIG00000032034) #11	Gatad2a (ENSMSIG00000032035) #12	Mau2 (ENSMSIG00000032036) #13	Sugp1 (ENSMSIG00000032037) #14	Tm6sf2 (ENSMSIG00000032038) #15	Hapln4 (ENSMSIG00000032039) #16	Ncan (ENSMSIG00000032040) #17	Nr2c2ap (ENSMSIG00000032043) #18	Rfxank (ENSMSIG00000032044) #19	Borcs8 (ENSMSIG00000032045) #20	ENSMSIG00000032046 #21	Tmem161a (ENSMSIG00000032047) #22	Slc25a42 (ENSMSIG00000032048) #23	Armc6 (ENSMSIG00000032049) #24	Sugp2 (ENSMSIG00000032050) #25	Homer3 (ENSMSIG00000032051) #26	Ddx49 (ENSMSIG00000032052) #27	Cope (ENSMSIG00000032053) #28	ENSMSIG00000032054 #29	ENSMSIG00000032055 #30	Upf1 (ENSMSIG00000032056) #31	Comp (ENSMSIG00000032057) #32	Crtc1 (ENSMSIG00000032058) #33	Klhl26 (ENSMSIG00000032059) #34	Tmem59l (ENSMSIG00000032060) #35	Crlf1 (ENSMSIG00000032061) #36	ENSMSIG00000032062 #37
spretus	MODERN SPECIES	17	Pbx4 (MGP_SPRETEiJ_G0032237) #7	Cilp2 (MGP_SPRETEiJ_G0032238) #8	Yjefn3 (MGP_SPRETEiJ_G0032239) #9	Ndufa13 (MGP_SPRETEiJ_G0032240) #10	Tssk6 (MGP_SPRETEiJ_G0032241) #11	Gatad2a (MGP_SPRETEiJ_G0032242) #12	Mau2 (MGP_SPRETEiJ_G0032243) #13	Sugp1 (MGP_SPRETEiJ_G0032244) #14	Tm6sf2 (MGP_SPRETEiJ_G0032245) #15	Hapln4 (MGP_SPRETEiJ_G0032246) #16	Ncan (MGP_SPRETEiJ_G0032247) #17	Rfxank (MGP_SPRETEiJ_G0032248) #19	Nr2c2ap (MGP_SPRETEiJ_G0032249) #18	MGP_SPRETEiJ_G0032250 #21	MGP_SPRETEiJ_G0032251 #21	Tmem161a (MGP_SPRETEiJ_G0032252) #22	Slc25a42 (MGP_SPRETEiJ_G0032253) #23	Armc6 (MGP_SPRETEiJ_G0032254) #24	Sugp2 (MGP_SPRETEiJ_G0032255) #25	Homer3 (MGP_SPRETEiJ_G0032256) #26	Ddx49 (MGP_SPRETEiJ_G0032257) #27	Cope (MGP_SPRETEiJ_G0032258) #28	MGP_SPRETEiJ_G0032259 #30	Upf1 (MGP_SPRETEiJ_G0032260) #31	Comp (MGP_SPRETEiJ_G0032261) #32	Crtc1 (MGP_SPRETEiJ_G0032262) #33	Klhl26 (MGP_SPRETEiJ_G0032263) #34	Tmem59l (MGP_SPRETEiJ_G0032264) #35	Crlf1 (MGP_SPRETEiJ_G0032265) #36	Rex1bd (MGP_SPRETEiJ_G0032266) #37	MGP_SPRETEiJ_G0032267
Mouse	MODERN SPECIES	17	Pbx4 (ENSMUSG00000031860) #7	Cilp2 (ENSMUSG00000044006) #8	Yjefn3 (ENSMUSG00000048967) #9	Ndufa13 (ENSMUSG00000036199) #10	Tssk6 (ENSMUSG00000047654) #11	Gatad2a (ENSMUSG00000036180) #12	Mau2 (ENSMUSG00000031858) #13	Sugp1 (ENSMUSG00000011306) #14	Tm6sf2 (ENSMUSG00000036151) #15	Hapln4 (ENSMUSG00000007594) #16	Ncan (ENSMUSG00000002341) #17	Rfxank (ENSMUSG00000036120) #19	Nr2c2ap (ENSMUSG00000071078) #18	Borcs8 (ENSMUSG00000002345) #20	Mef2b (ENSMUSG00000079033) #21	Tmem161a (ENSMUSG00000002342) #22	Slc25a42 (ENSMUSG00000002346) #23	Armc6 (ENSMUSG00000002343) #24	Sugp2 (ENSMUSG00000036054) #25	Homer3 (ENSMUSG00000003573) #26	Ddx49 (ENSMUSG00000057788) #27	Cope (ENSMUSG00000055681) #28	Cers1 (ENSMUSG00000087408) #30	Gdf1 (ENSMUSG00000109523) #30	Upf1 (ENSMUSG00000058301) #31	Comp (ENSMUSG00000031849) #32	Crtc1 (ENSMUSG00000003575) #33	Klhl26 (ENSMUSG00000055707) #34	Tmem59l (ENSMUSG00000035964) #35	Crlf1 (ENSMUSG00000007888) #36	Rex1bd (ENSMUSG00000058833) #37
Ryukyu mouse	MODERN SPECIES	17	Pbx4 (MGP_CAROLIEiJ_G0031119) #7	Cilp2 (MGP_CAROLIEiJ_G0031120) #8	Yjefn3 (MGP_CAROLIEiJ_G0031121) #9	Ndufa13 (MGP_CAROLIEiJ_G0031122) #10	Tssk6 (MGP_CAROLIEiJ_G0031123) #11	Gatad2a (MGP_CAROLIEiJ_G0031124) #12	Mau2 (MGP_CAROLIEiJ_G0031125) #13	Sugp1 (MGP_CAROLIEiJ_G0031126) #14	Tm6sf2 (MGP_CAROLIEiJ_G0031127) #15	Hapln4 (MGP_CAROLIEiJ_G0031128) #16	Ncan (MGP_CAROLIEiJ_G0031129) #17	Rfxank (MGP_CAROLIEiJ_G0031130) #19	Nr2c2ap (MGP_CAROLIEiJ_G0031131) #18	MGP_CAROLIEiJ_G0031132 #21	MGP_CAROLIEiJ_G0031133 #21	Tmem161a (MGP_CAROLIEiJ_G0031134) #22	Slc25a42 (MGP_CAROLIEiJ_G0031135) #23	Armc6 (MGP_CAROLIEiJ_G0031136) #24	Sugp2 (MGP_CAROLIEiJ_G0031137) #25	Homer3 (MGP_CAROLIEiJ_G0031138) #26	Ddx49 (MGP_CAROLIEiJ_G0031139) #27	Cope (MGP_CAROLIEiJ_G0031140) #28	MGP_CAROLIEiJ_G0031141 #30	Upf1 (MGP_CAROLIEiJ_G0031142) #31	Comp (MGP_CAROLIEiJ_G0031143) #32	Crtc1 (MGP_CAROLIEiJ_G0031144) #33	Klhl26 (MGP_CAROLIEiJ_G0031145) #34	Tmem59l (MGP_CAROLIEiJ_G0031146) #35	Crlf1 (MGP_CAROLIEiJ_G0031147) #36	Rex1bd (MGP_CAROLIEiJ_G0031148) #37	MGP_CAROLIEiJ_G0031149
Shrew mouse	MODERN SPECIES	10	Pbx4 (MGP_PahariEiJ_G0021584) #7	Cilp2 (MGP_PahariEiJ_G0021585) #8	Yjefn3 (MGP_PahariEiJ_G0021586) #9	Ndufa13 (MGP_PahariEiJ_G0021587) #10	Tssk6 (MGP_PahariEiJ_G0021588) #11	Gatad2a (MGP_PahariEiJ_G0021589) #12	Mau2 (MGP_PahariEiJ_G0021590) #13	Sugp1 (MGP_PahariEiJ_G0021591) #14	Tm6sf2 (MGP_PahariEiJ_G0021592) #15	Hapln4 (MGP_PahariEiJ_G0021593) #16	Ncan (MGP_PahariEiJ_G0021594) #17	Rfxank (MGP_PahariEiJ_G0021595) #19	Nr2c2ap (MGP_PahariEiJ_G0021596) #18	MGP_PahariEiJ_G0021597 #21	MGP_PahariEiJ_G0021598 #21	Tmem161a (MGP_PahariEiJ_G0021599) #22	Slc25a42 (MGP_PahariEiJ_G0021600) #23	Armc6 (MGP_PahariEiJ_G0021601) #24	Sugp2 (MGP_PahariEiJ_G0021602) #25	Homer3 (MGP_PahariEiJ_G0021603) #26	Ddx49 (MGP_PahariEiJ_G0021604) #27	Cope (MGP_PahariEiJ_G0021605) #28	MGP_PahariEiJ_G0021606 #30	Upf1 (MGP_PahariEiJ_G0021607) #31	Comp (MGP_PahariEiJ_G0021608) #32	Crtc1 (MGP_PahariEiJ_G0021609) #33	Klhl26 (MGP_PahariEiJ_G0021610) #34	Tmem59l (MGP_PahariEiJ_G0021611) #35	Crlf1 (MGP_PahariEiJ_G0021612) #36	Rex1bd (MGP_PahariEiJ_G0021613) #37	MGP_PahariEiJ_G0021614
Rat	MODERN SPECIES	7	Pbx4 (ENSRNOG00000010736) #7	Cilp2 (ENSRNOG00000020622) #8	Yjefn3 (ENSRNOG00000039191) #9	Ndufa13 (ENSRNOG00000020602) #10	Tssk6 (ENSRNOG00000020599) #11	Gatad2a (ENSRNOG00000022173) #12	Mau2 (ENSRNOG00000020526) #13	Sugp1 (ENSRNOG00000052111) #14	Tm6sf2 (ENSRNOG00000042237) #15	Hapln4 (ENSRNOG00000049949) #16	Ncan (ENSRNOG00000048036) #17	Nr2c2ap (ENSRNOG00000022247) #18	Rfxank (ENSRNOG00000033318) #19	Borcs8 (ENSRNOG00000020427) #20	Mef2b (ENSRNOG00000020400) #21	Tmem161a (ENSRNOG00000020390) #22	Slc25a42 (ENSRNOG00000020345) #23	Armc6 (ENSRNOG00000020280) #24	Sugp2 (ENSRNOG00000020269) #25	Homer3 (ENSRNOG00000020229) #26	Ddx49 (ENSRNOG00000022368) #27	Cope (ENSRNOG00000020178) #28	Cers1 (ENSRNOG00000067124) #29	Gdf1 (ENSRNOG00000070518) #30	Upf1 (ENSRNOG00000020134) #31	Comp (ENSRNOG00000048472) #32	Crtc1 (ENSRNOG00000022421) #33	Klhl26 (ENSRNOG00000020088) #34	Tmem59l (ENSRNOG00000022432) #35	Crlf1 (ENSRNOG00000020030) #36	Rex1bd (ENSRNOG00000019990) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1870	Pbx4 (ENSNGAG00000013031) #7	Cilp2 (ENSNGAG00000011748) #8	Yjefn3 (ENSNGAG00000021673) #9	Ndufa13 (ENSNGAG00000023080) #10	Tssk6 (ENSNGAG00000001299) #11	Gatad2a (ENSNGAG00000004469) #12	Mau2 (ENSNGAG00000015571) #13	Sugp1 (ENSNGAG00000018965) #14	Tm6sf2 (ENSNGAG00000020192) #15	Hapln4 (ENSNGAG00000014554) #16	Ncan (ENSNGAG00000022597) #17	Nr2c2ap (ENSNGAG00000010770) #18	Rfxank (ENSNGAG00000012986) #19	Borcs8 (ENSNGAG00000023653) #20	Mef2b (ENSNGAG00000010342) #21	Tmem161a (ENSNGAG00000023788) #22	Slc25a42 (ENSNGAG00000023980) #23	Armc6 (ENSNGAG00000021205) #24	Sugp2 (ENSNGAG00000005936) #25	Homer3 (ENSNGAG00000015803) #26	Ddx49 (ENSNGAG00000019673) #27	Cope (ENSNGAG00000022394) #28	ENSNGAG00000022292 #29	ENSNGAG00000022538 #30	Upf1 (ENSNGAG00000024107) #31	Comp (ENSNGAG00000024332) #32	Crtc1 (ENSNGAG00000021475) #33	Klhl26 (ENSNGAG00000010743) #34	Tmem59l (ENSNGAG00000020797) #35	Crlf1 (ENSNGAG00000022169) #36	Rex1bd (ENSNGAG00000013627) #37
Kangaroo rat	MODERN SPECIES	427	ENSDORG00000027508	ENSDORG00000012240	Atp13a1 (ENSDORG00000005185)	Gmip (ENSDORG00000005179)	Lpar2 (ENSDORG00000023437)	Tssk6 (ENSDORG00000008538) #11	Gatad2a (ENSDORG00000008536) #12	Mau2 (ENSDORG00000004918) #13	ENSDORG00000024315 #14	Tm6sf2 (ENSDORG00000004913) #15	Hapln4 (ENSDORG00000004912) #16	Nr2c2ap (ENSDORG00000001440) #18	Rfxank (ENSDORG00000001449) #19	Borcs8 (ENSDORG00000027906) #20	ENSDORG00000011003 #21	ENSDORG00000010999 #22	Slc25a42 (ENSDORG00000010998) #23	ENSDORG00000004418 #24	Sugp2 (ENSDORG00000011519) #25	ENSDORG00000004302 #26	Ddx49 (ENSDORG00000004301) #27	Cope (ENSDORG00000004298) #28	ENSDORG00000023557 #29	Upf1 (ENSDORG00000009984) #31	Comp (ENSDORG00000027719) #32	Crtc1 (ENSDORG00000026183) #33	Klhl26 (ENSDORG00000000436) #34	Tmem59l (ENSDORG00000024894) #35	Gm11808 (ENSDORG00000026093)	ENSDORG00000025514	Fkbp8 (ENSDORG00000010135)
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Hystricomorpha	ANCESTRAL SPECIES	47	ENSGT01050000244941.B.c	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Hystricomorpha_a	ANCESTRAL SPECIES	55	ENSGT01050000244941.B.c	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Hystricomorpha_b	ANCESTRAL SPECIES	66	ENSGT01050000244941.B.c	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Long-tailed chinchilla	MODERN SPECIES	231	LPAR2 (ENSCLAG00000016969)	CILP2 (ENSCLAG00000015928) #8	YJEFN3 (ENSCLAG00000016158) #9	NDUFA13 (ENSCLAG00000016915) #10	TSSK6 (ENSCLAG00000018107) #11	GATAD2A (ENSCLAG00000010160) #12	MAU2 (ENSCLAG00000006535) #13	SUGP1 (ENSCLAG00000003512) #14	TM6SF2 (ENSCLAG00000003633) #15	HAPLN4 (ENSCLAG00000003955) #16	NCAN (ENSCLAG00000004140) #17	NR2C2AP (ENSCLAG00000004378) #18	RFXANK (ENSCLAG00000004632) #19	BORCS8 (ENSCLAG00000004959) #20	MEF2B (ENSCLAG00000007377) #21	TMEM161A (ENSCLAG00000007578) #22	SLC25A42 (ENSCLAG00000008004) #23	ARMC6 (ENSCLAG00000008215) #24	SUGP2 (ENSCLAG00000011375) #25	HOMER3 (ENSCLAG00000011599) #26	DDX49 (ENSCLAG00000012844) #27	COPE (ENSCLAG00000003621) #28	CERS1 (ENSCLAG00000003897) #29	UPF1 (ENSCLAG00000004037) #31	COMP (ENSCLAG00000005109) #32	CRTC1 (ENSCLAG00000005682) #33	KLHL26 (ENSCLAG00000006029) #34	TMEM59L (ENSCLAG00000006357) #35	CRLF1 (ENSCLAG00000006697) #36	ENSCLAG00000007191 #37	UBA52 (ENSCLAG00000005686)
Degu	MODERN SPECIES	323	LPAR2 (ENSODEG00000010920)	CILP2 (ENSODEG00000010764) #8	YJEFN3 (ENSODEG00000011107) #9	NDUFA13 (ENSODEG00000013435) #10	TSSK6 (ENSODEG00000020032) #11	GATAD2A (ENSODEG00000013506) #12	MAU2 (ENSODEG00000012887) #13	SUGP1 (ENSODEG00000011538) #14	TM6SF2 (ENSODEG00000010936) #15	HAPLN4 (ENSODEG00000011689) #16	NCAN (ENSODEG00000011699) #17	NR2C2AP (ENSODEG00000011486) #18	RFXANK (ENSODEG00000013006) #19	BORCS8 (ENSODEG00000013003) #20	MEF2B (ENSODEG00000012357) #21	TMEM161A (ENSODEG00000012343) #22	SLC25A42 (ENSODEG00000012168) #23	ARMC6 (ENSODEG00000012613) #24	SUGP2 (ENSODEG00000012058) #25	HOMER3 (ENSODEG00000014870) #26	DDX49 (ENSODEG00000011203) #27	COPE (ENSODEG00000011547) #28	CERS1 (ENSODEG00000011214) #29	GDF1 (ENSODEG00000011857) #30	UPF1 (ENSODEG00000012426) #31	COMP (ENSODEG00000015412) #32	CRTC1 (ENSODEG00000011739) #33	KLHL26 (ENSODEG00000012544) #34	TMEM59L (ENSODEG00000012052) #35	CRLF1 (ENSODEG00000012883) #36	REX1BD (ENSODEG00000013625) #37
Guinea pig	MODERN SPECIES	72	GMIP (ENSCPOG00000011161)	LPAR2 (ENSCPOG00000012652)	CILP2 (ENSCPOG00000007219) #8	YJEFN3 (ENSCPOG00000023842) #9	NDUFA13 (ENSCPOG00000019995) #10	TSSK6 (ENSCPOG00000024320) #11	GATAD2A (ENSCPOG00000015396) #12	MAU2 (ENSCPOG00000003755) #13	SUGP1 (ENSCPOG00000007797) #14	TM6SF2 (ENSCPOG00000022916) #15	HAPLN4 (ENSCPOG00000023683) #16	NR2C2AP (ENSCPOG00000032927) #18	RFXANK (ENSCPOG00000003121) #19	BORCS8 (ENSCPOG00000036178) #20	MEF2B (ENSCPOG00000032781) #21	TMEM161A (ENSCPOG00000013640) #22	SLC25A42 (ENSCPOG00000013086) #23	ARMC6 (ENSCPOG00000006374) #24	SUGP2 (ENSCPOG00000006372) #25	HOMER3 (ENSCPOG00000004565) #26	DDX49 (ENSCPOG00000013626) #27	COPE (ENSCPOG00000013624) #28	CERS1 (ENSCPOG00000033783) #29	GDF1 (ENSCPOG00000031791) #30	UPF1 (ENSCPOG00000025463) #31	COMP (ENSCPOG00000025029) #32	CRTC1 (ENSCPOG00000034343) #33	KLHL26 (ENSCPOG00000020718) #34	TMEM59L (ENSCPOG00000021490) #35	CRLF1 (ENSCPOG00000021160) #36	UBA52 (ENSCPOG00000025880)
Naked mole-rat female	MODERN SPECIES	21	YJEFN3 (ENSHGLG00000019524) #9	NDUFA13 (ENSHGLG00000018628) #10	TSSK6 (ENSHGLG00000020778) #11	GATAD2A (ENSHGLG00000003176) #12	ENSHGLG00000049094 #13	ENSHGLG00000048186 #14	ENSHGLG00000039617 #25	ENSHGLG00000042474 #14	TM6SF2 (ENSHGLG00000004113) #15	HAPLN4 (ENSHGLG00000003896) #16	NCAN (ENSHGLG00000034381) #17	NR2C2AP (ENSHGLG00000033726) #18	RFXANK (ENSHGLG00000003396) #19	MEF2BNB (ENSHGLG00000047513) #20	ENSHGLG00000003123 #21	TMEM161A (ENSHGLG00000009517) #22	SLC25A42 (ENSHGLG00000008826) #23	ARMC6 (ENSHGLG00000008147) #24	HOMER3 (ENSHGLG00000006851) #26	ENSHGLG00000006789 #27	COPE (ENSHGLG00000006648) #28	CERS1 (ENSHGLG00000013716) #29	GDF1 (ENSHGLG00000042377) #30	UPF1 (ENSHGLG00000010900) #31	COMP (ENSHGLG00000009575) #32	ENSHGLG00000041161 #34	TMEM59L (ENSHGLG00000035873) #35	CRLF1 (ENSHGLG00000006747) #36	REX1BD (ENSHGLG00000018788) #37	UBA52 (ENSHGLG00000019381)	KXD1 (ENSHGLG00000044958)
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Marmotini	ANCESTRAL SPECIES	12	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Alpin marmot	MODERN SPECIES	24	PBX4 (ENSMMMG00000003652) #7	CILP2 (ENSMMMG00000003635) #8	YJEFN3 (ENSMMMG00000003614) #9	NDUFA13 (ENSMMMG00000003609) #10	TSSK6 (ENSMMMG00000003603) #11	GATAD2A (ENSMMMG00000003539) #12	MAU2 (ENSMMMG00000003432) #13	SUGP1 (ENSMMMG00000003416) #14	TM6SF2 (ENSMMMG00000003397) #15	HAPLN4 (ENSMMMG00000003386) #16	NCAN (ENSMMMG00000003066) #17	NR2C2AP (ENSMMMG00000003044) #18	RFXANK (ENSMMMG00000003029) #19	BORCS8 (ENSMMMG00000003015) #20	MEF2B (ENSMMMG00000002982) #21	TMEM161A (ENSMMMG00000002937) #22	SLC25A42 (ENSMMMG00000002914) #23	ARMC6 (ENSMMMG00000002877) #24	SUGP2 (ENSMMMG00000002743) #25	HOMER3 (ENSMMMG00000002691) #26	DDX49 (ENSMMMG00000002658) #27	COPE (ENSMMMG00000002634) #28	CERS1 (ENSMMMG00000002619) #29	UPF1 (ENSMMMG00000001874) #31	COMP (ENSMMMG00000001807) #32	CRTC1 (ENSMMMG00000001771) #33	ENSMMMG00000001749 #34	CRLF1 (ENSMMMG00000001730) #36	REX1BD (ENSMMMG00000001721) #37	ENSMMMG00000001669	FKBP8 (ENSMMMG00000001633)
Marmotini_b	ANCESTRAL SPECIES	12	ENSGT00940000162643 #7	ENSGT00390000008152.B.a #8	ENSGT00390000007227.b #9	ENSGT00390000000719 #10	ENSGT00940000160464 #11	ENSGT00390000004097.a #12	ENSGT00390000012198 #13	ENSGT00410000025695.a #14	ENSGT00390000012913.a #15	ENSGT00940000160926 #16	ENSGT00940000158649 #17	ENSGT00390000017748 #18	ENSGT00940000160753 #19	ENSGT00390000014856 #20	ENSGT00940000160699 #21	ENSGT00390000000672.a.a #22	ENSGT00940000158163 #23	ENSGT00390000002913 #24	ENSGT00410000025695.b #25	ENSGT00940000158081 #26	ENSGT00730000111231 #27	ENSGT00390000003478 #28	ENSGT01030000234515.b #29	ENSGT00940000162926 #30	ENSGT00940000157413 #31	ENSGT00940000162169 #32	ENSGT00390000010652.D.b #33	ENSGT00940000159238 #34	ENSGT00390000008279.b #35	ENSGT00940000156569.a.b #36	ENSGT00390000011631 #37
Arctic ground squirrel	MODERN SPECIES	73	LPAR2 (ENSUPAG00010017989)	PBX4 (ENSUPAG00010017995) #7	CILP2 (ENSUPAG00010018008) #8	YJEFN3 (ENSUPAG00010018017) #9	TSSK6 (ENSUPAG00010018027) #11	GATAD2A (ENSUPAG00010018036) #12	MAU2 (ENSUPAG00010018075) #13	SUGP1 (ENSUPAG00010018104) #14	TM6SF2 (ENSUPAG00010018116) #15	HAPLN4 (ENSUPAG00010018121) #16	NCAN (ENSUPAG00010018127) #17	NR2C2AP (ENSUPAG00010018146) #18	RFXANK (ENSUPAG00010018152) #19	BORCS8 (ENSUPAG00010018165) #20	MEF2B (ENSUPAG00010018172) #21	TMEM161A (ENSUPAG00010018179) #22	SLC25A42 (ENSUPAG00010018191) #23	ARMC6 (ENSUPAG00010018208) #24	SUGP2 (ENSUPAG00010018216) #25	HOMER3 (ENSUPAG00010018230) #26	DDX49 (ENSUPAG00010018246) #27	COPE (ENSUPAG00010018276) #28	CERS1 (ENSUPAG00010018294) #29	GDF1 (ENSUPAG00010018300) #30	UPF1 (ENSUPAG00010018302) #31	COMP (ENSUPAG00010018331) #32	CRTC1 (ENSUPAG00010018349) #33	KLHL26 (ENSUPAG00010018384) #34	TMEM59L (ENSUPAG00010018396) #35	CRLF1 (ENSUPAG00010018403) #36	REX1BD (ENSUPAG00010018419) #37
Squirrel	MODERN SPECIES	196	ENSSTOG00000019762	CILP2 (ENSSTOG00000026823) #8	YJEFN3 (ENSSTOG00000023979) #9	NDUFA13 (ENSSTOG00000022888) #10	TSSK6 (ENSSTOG00000021351) #11	GATAD2A (ENSSTOG00000022640) #12	MAU2 (ENSSTOG00000001026) #13	SUGP1 (ENSSTOG00000001020) #14	TM6SF2 (ENSSTOG00000025054) #15	HAPLN4 (ENSSTOG00000007240) #16	NCAN (ENSSTOG00000001012) #17	NR2C2AP (ENSSTOG00000001006) #18	RFXANK (ENSSTOG00000024080) #19	BORCS8 (ENSSTOG00000025422) #20	MEF2B (ENSSTOG00000005895) #21	TMEM161A (ENSSTOG00000005867) #22	SLC25A42 (ENSSTOG00000022047) #23	ARMC6 (ENSSTOG00000012997) #24	SUGP2 (ENSSTOG00000026887) #25	HOMER3 (ENSSTOG00000029095) #26	DDX49 (ENSSTOG00000006749) #27	COPE (ENSSTOG00000006736) #28	CERS1 (ENSSTOG00000029010) #29	GDF1 (ENSSTOG00000020887) #30	UPF1 (ENSSTOG00000009196) #31	COMP (ENSSTOG00000026172) #32	CRTC1 (ENSSTOG00000022992) #33	KLHL26 (ENSSTOG00000026260) #34	TMEM59L (ENSSTOG00000013508) #35	CRLF1 (ENSSTOG00000004708) #36	REX1BD (ENSSTOG00000004692) #37
Eurasian red squirrel	MODERN SPECIES	7	CILP2 (ENSSVLG00005018243) #8	YJEFN3 (ENSSVLG00005018175) #9	NDUFA13 (ENSSVLG00005018132) #10	TSSK6 (ENSSVLG00005018119) #11	GATAD2A (ENSSVLG00005018054) #12	MAU2 (ENSSVLG00005017993) #13	SUGP1 (ENSSVLG00005017843) #14	TM6SF2 (ENSSVLG00005017792) #15	HAPLN4 (ENSSVLG00005017756) #16	ENSSVLG00005017692	NCAN (ENSSVLG00005017503) #17	NR2C2AP (ENSSVLG00005017403) #18	RFXANK (ENSSVLG00005017362) #19	BORCS8 (ENSSVLG00005017305) #20	MEF2B (ENSSVLG00005017215) #21	TMEM161A (ENSSVLG00005017057) #22	SLC25A42 (ENSSVLG00005017005) #23	ARMC6 (ENSSVLG00005016951) #24	SUGP2 (ENSSVLG00005016823) #25	HOMER3 (ENSSVLG00005016701) #26	DDX49 (ENSSVLG00005016654) #27	COPE (ENSSVLG00005016567) #28	CERS1 (ENSSVLG00005016494) #29	UPF1 (ENSSVLG00005016436) #31	COMP (ENSSVLG00005016356) #32	CRTC1 (ENSSVLG00005016088) #33	KLHL26 (ENSSVLG00005015974) #34	TMEM59L (ENSSVLG00005015929) #35	CRLF1 (ENSSVLG00005015862) #36	REX1BD (ENSSVLG00005015816) #37	UBA52 (ENSSVLG00005025643)
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00390000000672.a.a #22
Pika	MODERN SPECIES	1956																ENSOPRG00000005876 #22