Bilateria	DUPLICATION
Bilateria	DUPLICATION
Bilateria	ANCESTRAL SPECIES																	ENSGT00940000153759.a.a #22
Chordata	ANCESTRAL SPECIES																	ENSGT00940000153759.a.a #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000153759.a.a #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000153759.a.a #22
Euteleostomi	ANCESTRAL SPECIES	2	ENSGT00390000008686.c	ENSGT00390000005979.a	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b	ENSGT00940000153759.a.a #22
Sarcopterygii	ANCESTRAL SPECIES		ENSGT00390000008686.c	ENSGT00390000005979.a	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b	ENSGT00940000153759.a.a #22
Tetrapoda	ANCESTRAL SPECIES	7	ENSGT00390000008686.c	ENSGT00390000005979.a	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596
Amniota	ANCESTRAL SPECIES	7	ENSGT00390000008686.c	ENSGT00390000005979.a	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596	ENSGT00940000153709.B
Mammalia	ANCESTRAL SPECIES	93	ENSGT00390000005979.a	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27
Theria	ANCESTRAL SPECIES	60	ENSGT00920000149157	ENSGT00390000008686.c	ENSGT00390000005979.a	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000162395	ENSGT00940000154607.b.a	ENSGT00940000162134	ENSGT00510000048324	ENSGT01070000253936	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27
Eutheria	ANCESTRAL SPECIES	1	ENSGT00390000003635 #8	ENSGT00940000171365	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000009586	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00390000003635 #8	ENSGT00940000171365	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000009586	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162490	ENSGT00940000157125
Euarchontoglires_A	ANCESTRAL SPECIES	23	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162490	ENSGT00940000157125
Glires	ANCESTRAL SPECIES	24	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162490	ENSGT00940000157125
Rodentia	ANCESTRAL SPECIES	12	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162490	ENSGT00940000157125
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162490	ENSGT00940000157125
Myomorpha	ANCESTRAL SPECIES	8	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Lesser Egyptian jerboa	MODERN SPECIES	49	ENSJJAG00000023777 #7	Jazf1 (ENSJJAG00000023495) #8	Creb5 (ENSJJAG00000015436) #9	Tril (ENSJJAG00000019712) #10	Cpvl (ENSJJAG00000008362) #11	Chn2 (ENSJJAG00000023189) #12	Prr15 (ENSJJAG00000010733) #13	Wipf3 (ENSJJAG00000014772) #14	Scrn1 (ENSJJAG00000017248) #15	Fkbp14 (ENSJJAG00000019945) #16	Plekha8 (ENSJJAG00000013522) #17	Mturn (ENSJJAG00000019476) #18	ENSJJAG00000018369 #19	Nod1 (ENSJJAG00000010878) #20	Ggct (ENSJJAG00000014364) #21	Gars (ENSJJAG00000022474) #22	Crhr2 (ENSJJAG00000023470) #23	Mindy4 (ENSJJAG00000024172) #24	Aqp1 (ENSJJAG00000017823) #25	Ghrhr (ENSJJAG00000007770) #26	Adcyap1r1 (ENSJJAG00000016559) #27	Neurod6 (ENSJJAG00000018349) #28	ENSJJAG00000000900 #29	ENSJJAG00000012458 #30	Ppp1r17 (ENSJJAG00000015397) #31	Pde1c (ENSJJAG00000023334) #32	ENSJJAG00000014802 #33	Lsm5 (ENSJJAG00000012145) #34	ENSJJAG00000020256 #35	Kbtbd2 (ENSJJAG00000017181) #36	ENSJJAG00000018184 #37
Muroidea	ANCESTRAL SPECIES	8	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Golden Hamster	MODERN SPECIES	683	Gria3 (ENSMAUG00000009295)	Jazf1 (ENSMAUG00000014658) #8	Creb5 (ENSMAUG00000008771) #9	Tril (ENSMAUG00000016482) #10	Cpvl (ENSMAUG00000007253) #11	Chn2 (ENSMAUG00000000516) #12	Prr15 (ENSMAUG00000010712) #13	Wipf3 (ENSMAUG00000018801) #14	Scrn1 (ENSMAUG00000000273) #15	Fkbp14 (ENSMAUG00000019388) #16	Plekha8 (ENSMAUG00000016565) #17	Mturn (ENSMAUG00000019125) #18	ENSMAUG00000017402 #19	Nod1 (ENSMAUG00000000376) #20	Ggct (ENSMAUG00000016279) #21	Gars (ENSMAUG00000016852) #22	Crhr2 (ENSMAUG00000015362) #23	Inmt (ENSMAUG00000000160)	Aqp1 (ENSMAUG00000016720) #25	Adcyap1r1 (ENSMAUG00000009134) #27	ENSMAUG00000010082	Neurod6 (ENSMAUG00000008758) #28	Ppp1r17 (ENSMAUG00000009624) #31
Chinese hamster chok1gshd	MODERN SPECIES	212	Jazf1 (ENSCGRG00001016388) #8	ENSCGRG00001012730	Creb5 (ENSCGRG00001018702) #9	Tril (ENSCGRG00001006970) #10	Cpvl (ENSCGRG00001012752) #11	Chn2 (ENSCGRG00001019164) #12	Prr15 (ENSCGRG00001001455) #13	Wipf3 (ENSCGRG00001013250) #14	Scrn1 (ENSCGRG00001001373) #15	Fkbp14 (ENSCGRG00001009179) #16	Plekha8 (ENSCGRG00001012359) #17	Mturn (ENSCGRG00001020710) #18	Znrf2 (ENSCGRG00001004725) #19	Nod1 (ENSCGRG00001006286) #20	Ggct (ENSCGRG00001000866) #21	Gars (ENSCGRG00001020450) #22	Crhr2 (ENSCGRG00001011128) #23	Inmt (ENSCGRG00001016187)	Mindy4 (ENSCGRG00001018063) #24	Aqp1 (ENSCGRG00001017485) #25	Ghrhr (ENSCGRG00001023797) #26	Adcyap1r1 (ENSCGRG00001000657) #27	ENSCGRG00001019521	Neurod6 (ENSCGRG00001007780) #28	Itprid1 (ENSCGRG00001021683)	Ppp1r17 (ENSCGRG00001001116) #31	Pde1c (ENSCGRG00001012049) #32	ENSCGRG00001003542	Lsm5 (ENSCGRG00001015461) #34	Avl9 (ENSCGRG00001000531) #35	Kbtbd2 (ENSCGRG00001019964) #36
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Northern American deer mouse	MODERN SPECIES	16	Jazf1 (ENSPEMG00000013422) #8	Creb5 (ENSPEMG00000008456) #9	Tril (ENSPEMG00000014631) #10	Cpvl (ENSPEMG00000018828) #11	Chn2 (ENSPEMG00000021269) #12	Prr15 (ENSPEMG00000022428) #13	Wipf3 (ENSPEMG00000024262) #14	Scrn1 (ENSPEMG00000029796) #15	Fkbp14 (ENSPEMG00000024960) #16	Plekha8 (ENSPEMG00000010696) #17	Mturn (ENSPEMG00000030724) #18	ENSPEMG00000019334 #19	Nod1 (ENSPEMG00000019408) #20	Ggct (ENSPEMG00000019318) #21	ENSPEMG00000029444	Gars (ENSPEMG00000019930) #22	Crhr2 (ENSPEMG00000019853) #23	Inmt (ENSPEMG00000019772)	Mindy4 (ENSPEMG00000019826) #24	Aqp1 (ENSPEMG00000025322) #25	Ghrhr (ENSPEMG00000019584) #26	Adcyap1r1 (ENSPEMG00000020118) #27	Neurod6 (ENSPEMG00000027820) #28	ENSPEMG00000030747	ENSPEMG00000024569	Itprid1 (ENSPEMG00000019451)	Ppp1r17 (ENSPEMG00000019366) #31	Pde1c (ENSPEMG00000001699) #32	ENSPEMG00000019994 #34	Avl9 (ENSPEMG00000019324) #35	ENSPEMG00000015927 #36
Prairie vole	MODERN SPECIES	353	Wipf3 (ENSMOCG00000016079) #14	Prr15 (ENSMOCG00000008900) #13	ENSMOCG00000006975	Chn2 (ENSMOCG00000020808) #12	ENSMOCG00000002376	Cpvl (ENSMOCG00000021500) #11	Tril (ENSMOCG00000001138) #10	Creb5 (ENSMOCG00000012076) #9	Jazf1 (ENSMOCG00000019670) #8	Tax1bp1 (ENSMOCG00000011041) #7	Hibadh (ENSMOCG00000020758)	Mturn (ENSMOCG00000019319) #18	ENSMOCG00000008922 #19	Nod1 (ENSMOCG00000022664) #20	Ggct (ENSMOCG00000001055) #21	Gars (ENSMOCG00000017680) #22	Crhr2 (ENSMOCG00000019712) #23	Inmt (ENSMOCG00000015765)	Mindy4 (ENSMOCG00000006426) #24	Aqp1 (ENSMOCG00000016051) #25	Ghrhr (ENSMOCG00000001328) #26	Adcyap1r1 (ENSMOCG00000006639) #27	Neurod6 (ENSMOCG00000012184) #28	Itprid1 (ENSMOCG00000019267)	Ppp1r17 (ENSMOCG00000007423) #31	Pde1c (ENSMOCG00000005504) #32	Lsm5 (ENSMOCG00000012018) #34	ENSMOCG00000002649 #35	ENSMOCG00000016027	ENSMOCG00000009452	Crim1 (ENSMOCG00000019306)
Murinae	ANCESTRAL SPECIES	4	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Mus	ANCESTRAL SPECIES	20	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Mus_A	ANCESTRAL SPECIES	7	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Mus_B	ANCESTRAL SPECIES	20	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Mouse	MODERN SPECIES	15	Tax1bp1 (ENSMUSG00000004535) #7	Jazf1 (ENSMUSG00000063568) #8	Creb5 (ENSMUSG00000053007) #9	Tril (ENSMUSG00000043496) #10	Cpvl (ENSMUSG00000052955) #11	Chn2 (ENSMUSG00000004633) #12	Prr15 (ENSMUSG00000045725) #13	Wipf3 (ENSMUSG00000086040) #14	Scrn1 (ENSMUSG00000019124) #15	Fkbp14 (ENSMUSG00000038074) #16	Plekha8 (ENSMUSG00000005225) #17	Mturn (ENSMUSG00000038065) #18	Znrf2 (ENSMUSG00000058446) #19	Nod1 (ENSMUSG00000038058) #20	Ggct (ENSMUSG00000002797) #21	Gars (ENSMUSG00000029777) #22	Crhr2 (ENSMUSG00000003476) #23	Inmt (ENSMUSG00000003477)	Mindy4 (ENSMUSG00000038022) #24	Aqp1 (ENSMUSG00000004655) #25	Ghrhr (ENSMUSG00000004654) #26	Adcyap1r1 (ENSMUSG00000029778) #27	Neurod6 (ENSMUSG00000037984) #28	Itprid1 (ENSMUSG00000037973)	Ppp1r17 (ENSMUSG00000002930) #31	Pde1c (ENSMUSG00000004347) #32	Lsm5 (ENSMUSG00000091625) #34	Avl9 (ENSMUSG00000029787) #35	Kbtbd2 (ENSMUSG00000059486) #36	Fkbp9 (ENSMUSG00000029781)	Nt5c3 (ENSMUSG00000029780)
Mus_C	ANCESTRAL SPECIES	19	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
spretus	MODERN SPECIES	15	Hibadh (MGP_SPRETEiJ_G0029396)	Tax1bp1 (MGP_SPRETEiJ_G0029397) #7	Jazf1 (MGP_SPRETEiJ_G0029398) #8	Creb5 (MGP_SPRETEiJ_G0029399) #9	Tril (MGP_SPRETEiJ_G0029400) #10	Cpvl (MGP_SPRETEiJ_G0029401) #11	Chn2 (MGP_SPRETEiJ_G0029402) #12	Prr15 (MGP_SPRETEiJ_G0029403) #13	MGP_SPRETEiJ_G0029404 #14	Scrn1 (MGP_SPRETEiJ_G0029405) #15	Plekha8 (MGP_SPRETEiJ_G0029407) #17	Mturn (MGP_SPRETEiJ_G0029408) #18	Znrf2 (MGP_SPRETEiJ_G0029409) #19	Nod1 (MGP_SPRETEiJ_G0029410) #20	Ggct (MGP_SPRETEiJ_G0029411) #21	Gars (MGP_SPRETEiJ_G0029412) #22	Crhr2 (MGP_SPRETEiJ_G0029413) #23	Inmt (MGP_SPRETEiJ_G0029414)	Mindy4 (MGP_SPRETEiJ_G0029415) #24	Aqp1 (MGP_SPRETEiJ_G0029416) #25	Ghrhr (MGP_SPRETEiJ_G0029417) #26	Adcyap1r1 (MGP_SPRETEiJ_G0029418) #27	Neurod6 (MGP_SPRETEiJ_G0029419) #28	Itprid1 (MGP_SPRETEiJ_G0029420)	Ppp1r17 (MGP_SPRETEiJ_G0029421) #31	Pde1c (MGP_SPRETEiJ_G0029422) #32	Lsm5 (MGP_SPRETEiJ_G0029423) #34	Avl9 (MGP_SPRETEiJ_G0029424) #35	Kbtbd2 (MGP_SPRETEiJ_G0029425) #36	Fkbp9 (MGP_SPRETEiJ_G0029426)	Nt5c3 (MGP_SPRETEiJ_G0029427)
Steppe mouse	MODERN SPECIES	267	ENSMSIG00000023644 #9	Tril (ENSMSIG00000023637) #10	Cpvl (ENSMSIG00000023569) #11	Chn2 (ENSMSIG00000022395) #12	Prr15 (ENSMSIG00000022378) #13	ENSMSIG00000022372	Wipf3 (ENSMSIG00000022314) #14	Scrn1 (ENSMSIG00000022293) #15	Fkbp14 (ENSMSIG00000022269) #16	Plekha8 (ENSMSIG00000022218) #17	Mturn (ENSMSIG00000022171) #18	ENSMSIG00000022149 #19	ENSMSIG00000022143	Nod1 (ENSMSIG00000022115) #20	Ggct (ENSMSIG00000022090) #21	Gars (ENSMSIG00000022024) #22	Crhr2 (ENSMSIG00000021921) #23	Inmt (ENSMSIG00000021912)	Mindy4 (ENSMSIG00000021881) #24	ENSMSIG00000021864 #25	Ghrhr (ENSMSIG00000021833) #26	Adcyap1r1 (ENSMSIG00000020999) #27	Neurod6 (ENSMSIG00000020985) #28	Itprid1 (ENSMSIG00000020961)	Ppp1r17 (ENSMSIG00000020953) #31	ENSMSIG00000020912 #32
Ryukyu mouse	MODERN SPECIES	15	Tax1bp1 (MGP_CAROLIEiJ_G0028395) #7	Jazf1 (MGP_CAROLIEiJ_G0028396) #8	Creb5 (MGP_CAROLIEiJ_G0028397) #9	Tril (MGP_CAROLIEiJ_G0028398) #10	Cpvl (MGP_CAROLIEiJ_G0028399) #11	Chn2 (MGP_CAROLIEiJ_G0028400) #12	Prr15 (MGP_CAROLIEiJ_G0028401) #13	Wipf3 (MGP_CAROLIEiJ_G0028402) #14	Scrn1 (MGP_CAROLIEiJ_G0028403) #15	MGP_CAROLIEiJ_G0028404 #16	Plekha8 (MGP_CAROLIEiJ_G0028405) #17	Mturn (MGP_CAROLIEiJ_G0028406) #18	Znrf2 (MGP_CAROLIEiJ_G0028407) #19	Nod1 (MGP_CAROLIEiJ_G0028408) #20	Ggct (MGP_CAROLIEiJ_G0028409) #21	Gars (MGP_CAROLIEiJ_G0028410) #22	Crhr2 (MGP_CAROLIEiJ_G0028411) #23	Inmt (MGP_CAROLIEiJ_G0028412)	Mindy4 (MGP_CAROLIEiJ_G0028413) #24	Aqp1 (MGP_CAROLIEiJ_G0028414) #25	Ghrhr (MGP_CAROLIEiJ_G0028415) #26	Adcyap1r1 (MGP_CAROLIEiJ_G0028416) #27	Neurod6 (MGP_CAROLIEiJ_G0028417) #28	Itprid1 (MGP_CAROLIEiJ_G0028418)	Ppp1r17 (MGP_CAROLIEiJ_G0028419) #31	Pde1c (MGP_CAROLIEiJ_G0028420) #32	Lsm5 (MGP_CAROLIEiJ_G0028421) #34	Avl9 (MGP_CAROLIEiJ_G0028422) #35	Kbtbd2 (MGP_CAROLIEiJ_G0028423) #36	Fkbp9 (MGP_CAROLIEiJ_G0028424)	Nt5c3 (MGP_CAROLIEiJ_G0028425)
Shrew mouse	MODERN SPECIES	11	Tax1bp1 (MGP_PahariEiJ_G0022145) #7	Jazf1 (MGP_PahariEiJ_G0022146) #8	Creb5 (MGP_PahariEiJ_G0022147) #9	Tril (MGP_PahariEiJ_G0022148) #10	Cpvl (MGP_PahariEiJ_G0022149) #11	Chn2 (MGP_PahariEiJ_G0022150) #12	Prr15 (MGP_PahariEiJ_G0022151) #13	Wipf3 (MGP_PahariEiJ_G0022152) #14	Scrn1 (MGP_PahariEiJ_G0022153) #15	Fkbp14 (MGP_PahariEiJ_G0022154) #16	Plekha8 (MGP_PahariEiJ_G0022155) #17	Mturn (MGP_PahariEiJ_G0022156) #18	Znrf2 (MGP_PahariEiJ_G0022157) #19	Nod1 (MGP_PahariEiJ_G0022158) #20	Ggct (MGP_PahariEiJ_G0022159) #21	Gars (MGP_PahariEiJ_G0022160) #22	Crhr2 (MGP_PahariEiJ_G0022161) #23	Inmt (MGP_PahariEiJ_G0022162)	Mindy4 (MGP_PahariEiJ_G0022163) #24	Aqp1 (MGP_PahariEiJ_G0022164) #25	Ghrhr (MGP_PahariEiJ_G0022165) #26	Adcyap1r1 (MGP_PahariEiJ_G0022166) #27	Neurod6 (MGP_PahariEiJ_G0022167) #28	Itprid1 (MGP_PahariEiJ_G0022168)	Ppp1r17 (MGP_PahariEiJ_G0022169) #31	Pde1c (MGP_PahariEiJ_G0022170) #32	Lsm5 (MGP_PahariEiJ_G0022171) #34	Avl9 (MGP_PahariEiJ_G0022172) #35	Kbtbd2 (MGP_PahariEiJ_G0022173) #36	Fkbp9 (MGP_PahariEiJ_G0022174)	Nt5c3 (MGP_PahariEiJ_G0022175)
Rat	MODERN SPECIES	14	Creb5 (ENSRNOG00000008622) #9	Tril (ENSRNOG00000026941) #10	Cpvl (ENSRNOG00000009172) #11	Chn2 (ENSRNOG00000009411) #12	Prr15 (ENSRNOG00000009564) #13	Wipf3 (ENSRNOG00000009571) #14	Scrn1 (ENSRNOG00000009636) #15	Fkbp14 (ENSRNOG00000009886) #16	Plekha8 (ENSRNOG00000009971) #17	Mturn (ENSRNOG00000010205) #18	ENSRNOG00000067229	Znrf2 (ENSRNOG00000049057) #19	Nod1 (ENSRNOG00000010629) #20	Ggct (ENSRNOG00000034084) #21	AABR07060610.1 (ENSRNOG00000033748)	Gars1 (ENSRNOG00000011052) #22	Crhr2 (ENSRNOG00000011145) #23	Inmt (ENSRNOG00000011250)	Mindy4 (ENSRNOG00000011530) #24	Aqp1 (ENSRNOG00000011648) #25	Ghrhr (ENSRNOG00000011808) #26	Adcyap1r1 (ENSRNOG00000012098) #27	Neurod6 (ENSRNOG00000026055) #28	Itprid1 (ENSRNOG00000012165)	Ppp1r17 (ENSRNOG00000012235) #31	Pde1c (ENSRNOG00000012337) #32	ENSRNOG00000069707	Lsm5 (ENSRNOG00000042126) #34	Avl9 (ENSRNOG00000013314) #35	Kbtbd2 (ENSRNOG00000013809) #36	Fkbp9 (ENSRNOG00000005478)
Upper Galilee mountains blind mole rat	MODERN SPECIES	565																Gars (ENSNGAG00000021844) #22	Crhr2 (ENSNGAG00000019386) #23	Inmt (ENSNGAG00000023808)	Mindy4 (ENSNGAG00000014680) #24	Aqp1 (ENSNGAG00000003825) #25	Ghrhr (ENSNGAG00000018741) #26	Adcyap1r1 (ENSNGAG00000019071) #27	Neurod6 (ENSNGAG00000002285) #28	Itprid1 (ENSNGAG00000015927)	Ppp1r17 (ENSNGAG00000024049) #31	Pde1c (ENSNGAG00000012440) #32	ENSNGAG00000010136	ENSNGAG00000024142 #34	Avl9 (ENSNGAG00000001626) #35	ENSNGAG00000018445	Kbtbd2 (ENSNGAG00000005350) #36
Kangaroo rat	MODERN SPECIES	522												ENSDORG00000024558	ENSDORG00000026202 #19	Nod1 (ENSDORG00000028691) #20	Ggct (ENSDORG00000016615) #21	Gars (ENSDORG00000002672) #22	Crhr2 (ENSDORG00000005035) #23	Mindy4 (ENSDORG00000006432) #24	Aqp1 (ENSDORG00000006434) #25	Ghrhr (ENSDORG00000006437) #26	Adcyap1r1 (ENSDORG00000006440) #27	Neurod6 (ENSDORG00000029822) #28	Ppp1r17 (ENSDORG00000011246) #31	Pde1c (ENSDORG00000011248) #32	Lsm5 (ENSDORG00000009422) #34	Avl9 (ENSDORG00000016237) #35	Kbtbd2 (ENSDORG00000016239) #36	ENSDORG00000026432	Fkbp9 (ENSDORG00000007111)	Nt5c3 (ENSDORG00000007112)	ENSDORG00000006619
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162490	ENSGT00940000157125
Hystricomorpha	ANCESTRAL SPECIES	14	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00460000041667	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000007738	ENSGT00950000183133.f	ENSGT00390000005599	ENSGT00940000153272.a.b	ENSGT00390000002915
Naked mole-rat female	MODERN SPECIES	5	TRIL (ENSHGLG00000037451) #10	CPVL (ENSHGLG00000016195) #11	CHN2 (ENSHGLG00000033880) #12	ENSHGLG00000017765	PRR15 (ENSHGLG00000047965) #13	SCRN1 (ENSHGLG00000008257) #15	FKBP14 (ENSHGLG00000006567) #16	ENSHGLG00000007305	PLEKHA8 (ENSHGLG00000005404) #17	ENSHGLG00000011844	MTURN (ENSHGLG00000044384) #18	ENSHGLG00000016122	ZNRF2 (ENSHGLG00000039084) #19	ENSHGLG00000032561	GGCT (ENSHGLG00000034422) #21	GARS1 (ENSHGLG00000016342) #22	CRHR2 (ENSHGLG00000018699) #23	ENSHGLG00000049417	INMT (ENSHGLG00000035929)	MINDY4 (ENSHGLG00000004247) #24	AQP1 (ENSHGLG00000045736) #25	ENSHGLG00000035477 #26	ADCYAP1R1 (ENSHGLG00000005424) #27	ENSHGLG00000048770	NEUROD6 (ENSHGLG00000049659) #28	ITPRID1 (ENSHGLG00000005782)	PPP1R17 (ENSHGLG00000046223) #31	ENSHGLG00000015158 #32	ENSHGLG00000041283	ENSHGLG00000048862	ENSHGLG00000045523
Hystricomorpha_a	ANCESTRAL SPECIES	41	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00460000041667	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00950000183133.f	ENSGT00390000005599	ENSGT00940000153272.a.b	ENSGT00390000002915	ENSGT00940000157992
Guinea pig	MODERN SPECIES	44	HIBADH (ENSCPOG00000020159)	TAX1BP1 (ENSCPOG00000000826) #7	JAZF1 (ENSCPOG00000034687) #8	CREB5 (ENSCPOG00000013545) #9	TRIL (ENSCPOG00000024604) #10	CPVL (ENSCPOG00000013406) #11	CHN2 (ENSCPOG00000013533) #12	WIPF3 (ENSCPOG00000006935) #14	SCRN1 (ENSCPOG00000006943) #15	FKBP14 (ENSCPOG00000040393) #16	PLEKHA8 (ENSCPOG00000005025) #17	MTURN (ENSCPOG00000031591) #18	ENSCPOG00000027612 #19	NOD1 (ENSCPOG00000014360) #20	GGCT (ENSCPOG00000024870) #21	GARS1 (ENSCPOG00000007547) #22	CRHR2 (ENSCPOG00000020502) #23	ENSCPOG00000024339	MINDY4 (ENSCPOG00000011378) #24	AQP1 (ENSCPOG00000011393) #25	GHRHR (ENSCPOG00000011400) #26	ADCYAP1R1 (ENSCPOG00000006008) #27	NEUROD6 (ENSCPOG00000006406) #28	PPP1R17 (ENSCPOG00000009777) #31	PDE1C (ENSCPOG00000001982) #32	ENSCPOG00000026887	GLYATL3 (ENSCPOG00000034672)	CENPQ (ENSCPOG00000008301)	AKR1B1 (ENSCPOG00000001285)	SLC35B4 (ENSCPOG00000005594)	LRGUK (ENSCPOG00000006764)
Hystricomorpha_b	ANCESTRAL SPECIES	39	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00460000041667	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00950000183133.f	ENSGT00390000005599	ENSGT00940000153272.a.b	ENSGT00390000002915	ENSGT00940000157992
Long-tailed chinchilla	MODERN SPECIES	117	JAZF1 (ENSCLAG00000009988) #8	CREB5 (ENSCLAG00000011091) #9	TRIL (ENSCLAG00000018111) #10	CPVL (ENSCLAG00000009635) #11	CHN2 (ENSCLAG00000014307) #12	PRR15 (ENSCLAG00000010326) #13	WIPF3 (ENSCLAG00000011493) #14	SCRN1 (ENSCLAG00000010543) #15	FKBP14 (ENSCLAG00000010774) #16	PLEKHA8 (ENSCLAG00000011413) #17	MTURN (ENSCLAG00000011854) #18	ENSCLAG00000016063	ENSCLAG00000010973 #19	NOD1 (ENSCLAG00000011448) #20	GGCT (ENSCLAG00000012144) #21	GARS1 (ENSCLAG00000007985) #22	CRHR2 (ENSCLAG00000012401) #23	INMT (ENSCLAG00000016181)	MINDY4 (ENSCLAG00000013883) #24	AQP1 (ENSCLAG00000006088) #25	GHRHR (ENSCLAG00000006687) #26	ADCYAP1R1 (ENSCLAG00000006669) #27	NEUROD6 (ENSCLAG00000008613) #28	ITPRID1 (ENSCLAG00000010687)	PPP1R17 (ENSCLAG00000008585) #31	PDE1C (ENSCLAG00000014841) #32	ENSCLAG00000011912	ENSCLAG00000017748	GLYATL3 (ENSCLAG00000007498)	CENPQ (ENSCLAG00000008256)	AKR1B1 (ENSCLAG00000012329)
Degu	MODERN SPECIES	56	CREB5 (ENSODEG00000008640) #9	TRIL (ENSODEG00000019862) #10	ENSODEG00000009470 #11	ENSODEG00000008241	CHN2 (ENSODEG00000008637) #12	PRR15 (ENSODEG00000019540) #13	ENSODEG00000019511	WIPF3 (ENSODEG00000007842) #14	SCRN1 (ENSODEG00000008733) #15	FKBP14 (ENSODEG00000009158) #16	PLEKHA8 (ENSODEG00000010642) #17	MTURN (ENSODEG00000008081) #18	ENSODEG00000009309 #19	NOD1 (ENSODEG00000008060) #20	GGCT (ENSODEG00000008799) #21	GARS1 (ENSODEG00000008246) #22	CRHR2 (ENSODEG00000013231) #23	INMT (ENSODEG00000009377)	MINDY4 (ENSODEG00000010027) #24	AQP1 (ENSODEG00000010019) #25	GHRHR (ENSODEG00000009472) #26	ADCYAP1R1 (ENSODEG00000008909) #27	NEUROD6 (ENSODEG00000011322) #28	ITPRID1 (ENSODEG00000010843)	PPP1R17 (ENSODEG00000008669) #31	PDE1C (ENSODEG00000009048) #32	ENSODEG00000009988	ENSODEG00000009286	ENSODEG00000010126	CENPQ (ENSODEG00000010568)	ENSODEG00000010302
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162490	ENSGT00940000157125
Marmotini	ANCESTRAL SPECIES	37	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000165512	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.fb #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162490	ENSGT00940000157125
Marmotini_b	ANCESTRAL SPECIES	26	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000165512	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.fb #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162490	ENSGT00940000157125
Arctic ground squirrel	MODERN SPECIES	250								SCRN1 (ENSUPAG00010007165) #15	FKBP14 (ENSUPAG00010007179) #16	PLEKHA8 (ENSUPAG00010007195) #17	MTURN (ENSUPAG00010007219) #18	ZNRF2 (ENSUPAG00010007266) #19	ENSUPAG00010007281	NOD1 (ENSUPAG00010007290) #20	GGCT (ENSUPAG00010007357) #21	GARS1 (ENSUPAG00010007365) #22	CRHR2 (ENSUPAG00010007394) #23	INMT (ENSUPAG00010007565)	MINDY4 (ENSUPAG00010007571) #24	AQP1 (ENSUPAG00010007645) #25	GHRHR (ENSUPAG00010007648) #26	ADCYAP1R1 (ENSUPAG00010007676) #27	NEUROD6 (ENSUPAG00010008757) #28	ITPRID1 (ENSUPAG00010008761)	PPP1R17 (ENSUPAG00010008804) #31	PDE1C (ENSUPAG00010008833) #32	ENSUPAG00010010249 #34	AVL9 (ENSUPAG00010010280) #35	KBTBD2 (ENSUPAG00010010292) #36	ENSUPAG00010010304	FKBP9 (ENSUPAG00010010313)
Squirrel	MODERN SPECIES	78	TAX1BP1 (ENSSTOG00000003056) #7	JAZF1 (ENSSTOG00000005946) #8	CREB5 (ENSSTOG00000013279) #9	CPVL (ENSSTOG00000010505) #11	CHN2 (ENSSTOG00000002346) #12	PRR15 (ENSSTOG00000020339) #13	WIPF3 (ENSSTOG00000009012) #14	SCRN1 (ENSSTOG00000009029) #15	FKBP14 (ENSSTOG00000005235) #16	PLEKHA8 (ENSSTOG00000009052) #17	MTURN (ENSSTOG00000021099) #18	ENSSTOG00000034241	ENSSTOG00000033923 #19	NOD1 (ENSSTOG00000022644) #20	GGCT (ENSSTOG00000015484) #21	GARS1 (ENSSTOG00000015493) #22	CRHR2 (ENSSTOG00000015502) #23	INMT (ENSSTOG00000027441)	MINDY4 (ENSSTOG00000022279) #24	AQP1 (ENSSTOG00000015517) #25	GHRHR (ENSSTOG00000015519) #26	ADCYAP1R1 (ENSSTOG00000013243) #27	NEUROD6 (ENSSTOG00000002956) #28	ITPRID1 (ENSSTOG00000002962)	PPP1R17 (ENSSTOG00000002987) #31	PDE1C (ENSSTOG00000002994) #32	LSM5 (ENSSTOG00000012662) #34	AVL9 (ENSSTOG00000012669) #35	KBTBD2 (ENSSTOG00000012679) #36	ENSSTOG00000024497	FKBP9 (ENSSTOG00000019843)
Alpin marmot	MODERN SPECIES	26	CREB5 (ENSMMMG00000006736) #9	TRIL (ENSMMMG00000006835) #10	CPVL (ENSMMMG00000006841) #11	CHN2 (ENSMMMG00000006900) #12	PRR15 (ENSMMMG00000007372) #13	WIPF3 (ENSMMMG00000007380) #14	SCRN1 (ENSMMMG00000007428) #15	FKBP14 (ENSMMMG00000007497) #16	ENSMMMG00000007508	PLEKHA8 (ENSMMMG00000007517) #17	MTURN (ENSMMMG00000007542) #18	ENSMMMG00000007598 #19	ENSMMMG00000007602	NOD1 (ENSMMMG00000007605) #20	GGCT (ENSMMMG00000007652) #21	GARS1 (ENSMMMG00000007668) #22	CRHR2 (ENSMMMG00000007864) #23	INMT (ENSMMMG00000008027)	MINDY4 (ENSMMMG00000008032) #24	AQP1 (ENSMMMG00000008060) #25	GHRHR (ENSMMMG00000008069) #26	ADCYAP1R1 (ENSMMMG00000008134) #27	NEUROD6 (ENSMMMG00000008704) #28	ITPRID1 (ENSMMMG00000008717)	PPP1R17 (ENSMMMG00000008766) #31	PDE1C (ENSMMMG00000008812) #32	ENSMMMG00000010773 #34	AVL9 (ENSMMMG00000010815) #35	KBTBD2 (ENSMMMG00000010841) #36	ENSMMMG00000010853	FKBP9 (ENSMMMG00000010860)
Eurasian red squirrel	MODERN SPECIES	17	ENSSVLG00005012960	CREB5 (ENSSVLG00005013014) #9	TRIL (ENSSVLG00005013079) #10	CPVL (ENSSVLG00005013200) #11	CHN2 (ENSSVLG00005013621) #12	PRR15 (ENSSVLG00005013762) #13	WIPF3 (ENSSVLG00005013843) #14	SCRN1 (ENSSVLG00005013986) #15	FKBP14 (ENSSVLG00005014087) #16	PLEKHA8 (ENSSVLG00005014153) #17	MTURN (ENSSVLG00005014224) #18	ENSSVLG00005014275	ZNRF2 (ENSSVLG00005014320) #19	NOD1 (ENSSVLG00005014361) #20	GGCT (ENSSVLG00005014411) #21	GARS1 (ENSSVLG00005014500) #22	CRHR2 (ENSSVLG00005014654) #23	INMT (ENSSVLG00005015252)	MINDY4 (ENSSVLG00005015309) #24	AQP1 (ENSSVLG00005015339) #25	GHRHR (ENSSVLG00005015402) #26	ADCYAP1R1 (ENSSVLG00005015714) #27	NEUROD6 (ENSSVLG00005016325) #28	ITPRID1 (ENSSVLG00005016358)	PPP1R17 (ENSSVLG00005016581) #31	PDE1C (ENSSVLG00005016706) #32	ENSSVLG00005017324 #34	AVL9 (ENSSVLG00005017421) #35	KBTBD2 (ENSSVLG00005017556) #36	ENSSVLG00005017628	RP9 (ENSSVLG00005017672)
Lagomorpha	ANCESTRAL SPECIES	39	ENSGT00940000155255	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Rabbit	MODERN SPECIES	1	ENSOCUG00000026115	CREB5 (ENSOCUG00000003639) #9	ENSOCUG00000026897 #10	CPVL (ENSOCUG00000016573) #11	ENSOCUG00000009401 #12	PRR15 (ENSOCUG00000009403) #13	WIPF3 (ENSOCUG00000000802) #14	SCRN1 (ENSOCUG00000000804) #15	FKBP14 (ENSOCUG00000000805) #16	PLEKHA8 (ENSOCUG00000000807) #17	ENSOCUG00000036408	ENSOCUG00000036913 #19	ENSOCUG00000039679 #19	NOD1 (ENSOCUG00000005277) #20	GGCT (ENSOCUG00000005280) #21	GARS1 (ENSOCUG00000005295) #22	CRHR2 (ENSOCUG00000024444) #23	ENSOCUG00000023063	INMT (ENSOCUG00000024221)	MINDY4 (ENSOCUG00000006022) #24	ENSOCUG00000022666 #25	ADCYAP1R1 (ENSOCUG00000000120) #27	ITPRID1 (ENSOCUG00000009101)	PPP1R17 (ENSOCUG00000009110) #31	PDE1C (ENSOCUG00000009113) #32	ENSOCUG00000032361	ENSOCUG00000031371	ENSOCUG00000012951	ENSOCUG00000029043 #34	AVL9 (ENSOCUG00000012508) #35	KBTBD2 (ENSOCUG00000012525) #36
Pika	MODERN SPECIES	2223															GGCT (ENSOPRG00000005329) #21	GARS1 (ENSOPRG00000005342) #22
Tree shrew	MODERN SPECIES	5450															GGCT (ENSTBEG00000007809) #21	GARS1 (ENSTBEG00000008972) #22	CRHR2 (ENSTBEG00000009543) #23
Primates	ANCESTRAL SPECIES	12	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00940000157125
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00940000157125
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00390000003635 #8	ENSGT00860000135709	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00940000157125
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00910000147051	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT01020000230346.F.t	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00530000062932.c.a.a.a.a.a.b.a.a.a	ENSGT00940000163338.b.b	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162896.p	ENSGT00940000157125
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00910000147051	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288.e #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT01020000230346.F.t	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00530000062932.c.a.a.a.a.a.b.a.a.a	ENSGT00940000163338.b.b.c	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162896.p	ENSGT00940000157125
Hominidae	ANCESTRAL SPECIES	11	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00910000147051	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288.e #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT01020000230346.F.t	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00530000062932.c.a.a.a.a.a.b.a.a.a	ENSGT00940000163338.b.b.c	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162896.p	ENSGT00940000157125
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	25	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00910000147051	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288.e #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT01020000230346.F.t	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162896.p	ENSGT00940000157125
Homo/Pan group	ANCESTRAL SPECIES	24	ENSGT00950000183087.A.a.b.a.g.b.b	ENSGT00410000028196	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288.e #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162896.p	ENSGT00940000157125
Pan	ANCESTRAL SPECIES	25	ENSGT00950000183087.A.a.b.a.g.b.b	ENSGT00410000028196	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288.e #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162896.p	ENSGT00940000157125
Chimpanzee	MODERN SPECIES	20	ENSPTRG00000045009	CREB5 (ENSPTRG00000019028) #9	ENSPTRG00000050877	TRIL (ENSPTRG00000043675) #10	CPVL (ENSPTRG00000019029) #11	CHN2 (ENSPTRG00000019030) #12	PRR15 (ENSPTRG00000044744) #13	WIPF3 (ENSPTRG00000019033) #14	SCRN1 (ENSPTRG00000019034) #15	FKBP14 (ENSPTRG00000019035) #16	PLEKHA8 (ENSPTRG00000019036) #17	MTURN (ENSPTRG00000041737) #18	ZNRF2 (ENSPTRG00000019038) #19	NOD1 (ENSPTRG00000019040) #20	GGCT (ENSPTRG00000019041) #21	GARS1 (ENSPTRG00000019042) #22	CRHR2 (ENSPTRG00000019043) #23	INMT (ENSPTRG00000019045)	MINDY4 (ENSPTRG00000019046) #24	AQP1 (ENSPTRG00000019047) #25	GHRHR (ENSPTRG00000019048) #26	ADCYAP1R1 (ENSPTRG00000019049) #27	NEUROD6 (ENSPTRG00000019050) #28	ITPRID1 (ENSPTRG00000019051)	PPP1R17 (ENSPTRG00000019052) #31	PDE1C (ENSPTRG00000019053) #32	LSM5 (ENSPTRG00000019057) #34	AVL9 (ENSPTRG00000019058) #35	KBTBD2 (ENSPTRG00000019063) #36	ENSPTRG00000047538	FKBP9 (ENSPTRG00000019066)
Bonobo	MODERN SPECIES	20	ENSPPAG00000037283	TRIL (ENSPPAG00000024310) #10	CPVL (ENSPPAG00000039137) #11	CHN2 (ENSPPAG00000031517) #12	PRR15 (ENSPPAG00000002015) #13	ENSPPAG00000005671	ENSPPAG00000024726	WIPF3 (ENSPPAG00000005537) #14	SCRN1 (ENSPPAG00000020473) #15	FKBP14 (ENSPPAG00000019048) #16	PLEKHA8 (ENSPPAG00000037728) #17	ENSPPAG00000039934 #18	ENSPPAG00000037281 #19	NOD1 (ENSPPAG00000028538) #20	GGCT (ENSPPAG00000031715) #21	GARS1 (ENSPPAG00000037266) #22	CRHR2 (ENSPPAG00000039407) #23	INMT (ENSPPAG00000040014)	MINDY4 (ENSPPAG00000012354) #24	AQP1 (ENSPPAG00000034128) #25	GHRHR (ENSPPAG00000029547) #26	ADCYAP1R1 (ENSPPAG00000029161) #27	ITPRID1 (ENSPPAG00000029367)	PDE1C (ENSPPAG00000042414) #32	PPP1R17 (ENSPPAG00000005823) #31	ENSPPAG00000019769	ENSPPAG00000039171	KBTBD2 (ENSPPAG00000029686) #36	ENSPPAG00000040570	FKBP9 (ENSPPAG00000043048)	ENSPPAG00000026646
Human	MODERN SPECIES	19	JAZF1 (ENSG00000153814) #8	CREB5 (ENSG00000146592) #9	TRIL (ENSG00000255690) #10	CPVL (ENSG00000106066) #11	CHN2 (ENSG00000106069) #12	PRR15 (ENSG00000176532) #13	WIPF3 (ENSG00000122574) #14	SCRN1 (ENSG00000136193) #15	FKBP14 (ENSG00000106080) #16	PLEKHA8 (ENSG00000106086) #17	MTURN (ENSG00000180354) #18	ZNRF2 (ENSG00000180233) #19	NOD1 (ENSG00000106100) #20	GGCT (ENSG00000006625) #21	ENSG00000281039	GARS1 (ENSG00000106105) #22	CRHR2 (ENSG00000106113) #23	INMT (ENSG00000241644)	MINDY4 (ENSG00000106125) #24	ENSG00000250424	AQP1 (ENSG00000240583) #25	GHRHR (ENSG00000106128) #26	ADCYAP1R1 (ENSG00000078549) #27	NEUROD6 (ENSG00000164600) #28	ITPRID1 (ENSG00000180347)	PPP1R17 (ENSG00000106341) #31	PDE1C (ENSG00000154678) #32	LSM5 (ENSG00000106355) #34	AVL9 (ENSG00000105778) #35	KBTBD2 (ENSG00000170852) #36	FKBP9 (ENSG00000122642)
Gorilla	MODERN SPECIES	20	TRIL (ENSGGOG00000026471) #10	CPVL (ENSGGOG00000009483) #11	CHN2 (ENSGGOG00000012719) #12	PRR15 (ENSGGOG00000041768) #13	ENSGGOG00000037179	WIPF3 (ENSGGOG00000005723) #14	SCRN1 (ENSGGOG00000005731) #15	FKBP14 (ENSGGOG00000014543) #16	PLEKHA8 (ENSGGOG00000006031) #17	MTURN (ENSGGOG00000002586) #18	ENSGGOG00000041554 #19	ENSGGOG00000038526	NOD1 (ENSGGOG00000005081) #20	ENSGGOG00000024930 #21	ENSGGOG00000038792	GARS1 (ENSGGOG00000004916) #22	CRHR2 (ENSGGOG00000028007) #23	ENSGGOG00000004920 #23	INMT (ENSGGOG00000004924)	MINDY4 (ENSGGOG00000028054) #24	AQP1 (ENSGGOG00000009877) #25	GHRHR (ENSGGOG00000001291) #26	ADCYAP1R1 (ENSGGOG00000015863) #27	NEUROD6 (ENSGGOG00000026908) #28	ITPRID1 (ENSGGOG00000009865)	PPP1R17 (ENSGGOG00000012803) #31	PDE1C (ENSGGOG00000006783) #32	LSM5 (ENSGGOG00000043469) #34	AVL9 (ENSGGOG00000010335) #35	KBTBD2 (ENSGGOG00000003965) #36	ENSGGOG00000008108
Orangutan	MODERN SPECIES	20	CHN2 (ENSPPYG00000017686) #12	PRR15 (ENSPPYG00000017685) #13	ENSPPYG00000032931	WIPF3 (ENSPPYG00000038632) #14	SCRN1 (ENSPPYG00000017684) #15	ENSPPYG00000031497	FKBP14 (ENSPPYG00000039452) #16	PLEKHA8 (ENSPPYG00000017682) #17	ENSPPYG00000032107 #18	ZNRF2 (ENSPPYG00000017680) #19	ENSPPYG00000040771	NOD1 (ENSPPYG00000017678) #20	ENSPPYG00000036154	GGCT (ENSPPYG00000017676) #21	ENSPPYG00000006845	GARS1 (ENSPPYG00000017673) #22	CRHR2 (ENSPPYG00000017672) #23	INMT (ENSPPYG00000017671)	MINDY4 (ENSPPYG00000017670) #24	AQP1 (ENSPPYG00000017669) #25	GHRHR (ENSPPYG00000017668) #26	ADCYAP1R1 (ENSPPYG00000017667) #27	NEUROD6 (ENSPPYG00000017666) #28	ITPRID1 (ENSPPYG00000017664)	PPP1R17 (ENSPPYG00000017663) #31	PDE1C (ENSPPYG00000017662) #32	LSM5 (ENSPPYG00000017661) #34	AVL9 (ENSPPYG00000017660) #35	KBTBD2 (ENSPPYG00000039601) #36	FKBP9 (ENSPPYG00000017654)	NT5C3A (ENSPPYG00000017653)
Gibbon	MODERN SPECIES	7	CREB5 (ENSNLEG00000015057) #9	TRIL (ENSNLEG00000031765) #10	CPVL (ENSNLEG00000015062) #11	ENSNLEG00000005359	CHN2 (ENSNLEG00000015081) #12	PRR15 (ENSNLEG00000034928) #13	ENSNLEG00000015096 #14	SCRN1 (ENSNLEG00000035744) #15	FKBP14 (ENSNLEG00000029878) #16	PLEKHA8 (ENSNLEG00000015111) #17	ZNRF2 (ENSNLEG00000027608) #19	ENSNLEG00000027614	ENSNLEG00000015141	NOD1 (ENSNLEG00000015142) #20	GGCT (ENSNLEG00000015148) #21	GARS1 (ENSNLEG00000015152) #22	CRHR2 (ENSNLEG00000015171) #23	INMT (ENSNLEG00000015185)	MINDY4 (ENSNLEG00000015188) #24	AQP1 (ENSNLEG00000035862) #25	GHRHR (ENSNLEG00000015214) #26	ADCYAP1R1 (ENSNLEG00000030573) #27	NEUROD6 (ENSNLEG00000015231) #28	ITPRID1 (ENSNLEG00000015233)	PDE1C (ENSNLEG00000015246) #32	ENSNLEG00000033028	LSM5 (ENSNLEG00000015268) #34	AVL9 (ENSNLEG00000015273) #35	KBTBD2 (ENSNLEG00000012407) #36	ENSNLEG00000035994	FKBP9 (ENSNLEG00000015401)
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00910000147051	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT01020000230346.F.t	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00530000062932.c.a.a.a.a.a.b.a.a.a.a.a	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162896.p	ENSGT00940000157125
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00910000147051	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT01020000230346.F.t	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00530000062932.c.a.a.a.a.a.b.a.a.a.a.a	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00940000154400.a.a.d.a.b	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00530000063023.B.o.b.c.b	ENSGT00940000154172.hb
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00910000147051	ENSGT00940000160267 #14	ENSGT00390000013474.b.b.a.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT01020000230346.F.t	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000000628.w.a.b	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000154172.hb	ENSGT00530000063023.B.o.b.c.b
Macaca	ANCESTRAL SPECIES	3	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00910000147051	ENSGT00940000160267 #14	ENSGT00390000013474.b.b.a.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT01020000230346.F.t	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000000628.w.a.b	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000154172.hb	ENSGT00530000063023.B.o.b.c.b
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.b.b.b	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000159017.a.b ##19	ENSGT00910000147051	ENSGT00940000160267 #14	ENSGT00390000013474.b.b.a.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000000628.w.a.b	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000154172.hb	ENSGT00530000063023.B.o.b.c.b	ENSGT00940000156069 #36
Rhesus	MODERN SPECIES	13	ENSMMUG00000059764	ENSMMUG00000053302	CHN2 (ENSMMUG00000008329) #12	PRR15 (ENSMMUG00000064213) #13	ENSMMUG00000062652 ##19	ENSMMUG00000050459	ENSMMUG00000065141	WIPF3 (ENSMMUG00000045852) #14	SCRN1 (ENSMMUG00000016803) #15	FKBP14 (ENSMMUG00000012528) #16	PLEKHA8 (ENSMMUG00000012529) #17	MTURN (ENSMMUG00000012539) #18	ZNRF2 (ENSMMUG00000012541) #19	NOD1 (ENSMMUG00000012547) #20	GGCT (ENSMMUG00000012550) #21	GARS1 (ENSMMUG00000004719) #22	CRHR2 (ENSMMUG00000011758) #23	INMT (ENSMMUG00000064085)	MINDY4 (ENSMMUG00000011761) #24	GHRHR (ENSMMUG00000011764) #26	ADCYAP1R1 (ENSMMUG00000005299) #27	NEUROD6 (ENSMMUG00000022699) #28	ITPRID1 (ENSMMUG00000022484)	PPP1R17 (ENSMMUG00000022485) #31	PDE1C (ENSMMUG00000001625) #32	ENSMMUG00000060356	LSM5 (ENSMMUG00000062758) #34	AVL9 (ENSMMUG00000011770) #35	ENSMMUG00000059061	KBTBD2 (ENSMMUG00000004944) #36	FKBP9 (ENSMMUG00000011694)
Crab-eating macaque	MODERN SPECIES	13	CPVL (ENSMFAG00000000559) #11	ENSMFAG00000050922	CHN2 (ENSMFAG00000033189) #12	PRR15 (ENSMFAG00000023520) #13	ENSMFAG00000062462 ##19	ENSMFAG00000048158	WIPF3 (ENSMFAG00000036122) #14	SCRN1 (ENSMFAG00000037021) #15	FKBP14 (ENSMFAG00000045864) #16	PLEKHA8 (ENSMFAG00000040078) #17	MTURN (ENSMFAG00000037983) #18	ENSMFAG00000055571	ZNRF2 (ENSMFAG00000007926) #19	NOD1 (ENSMFAG00000034463) #20	GGCT (ENSMFAG00000033057) #21	GARS1 (ENSMFAG00000038863) #22	CRHR2 (ENSMFAG00000046108) #23	INMT (ENSMFAG00000035609)	GHRHR (ENSMFAG00000031512) #26	MINDY4 (ENSMFAG00000013399) #24	ADCYAP1R1 (ENSMFAG00000040314) #27	NEUROD6 (ENSMFAG00000025612) #28	ITPRID1 (ENSMFAG00000000805)	PPP1R17 (ENSMFAG00000002182) #31	ENSMFAG00000002209	PDE1C (ENSMFAG00000046067) #32	ENSMFAG00000050533	ENSMFAG00000038508 #34	ENSMFAG00000065398	AVL9 (ENSMFAG00000030881) #35	ENSMFAG00000061438
Pig-tailed macaque	MODERN SPECIES	534	CREB5 (ENSMNEG00000034055) #9	TRIL (ENSMNEG00000004465) #10	CPVL (ENSMNEG00000031185) #11	CHN2 (ENSMNEG00000034226) #12	PRR15 (ENSMNEG00000011732) #13	ENSMNEG00000000853	WIPF3 (ENSMNEG00000028373) #14	SCRN1 (ENSMNEG00000002956) #15	PLEKHA8 (ENSMNEG00000010179) #17	FKBP14 (ENSMNEG00000038941) #16	MTURN (ENSMNEG00000040559) #18	ZNRF2 (ENSMNEG00000042979) #19	ENSMNEG00000043468	NOD1 (ENSMNEG00000036753) #20	GGCT (ENSMNEG00000029761) #21	GARS1 (ENSMNEG00000043203) #22	CRHR2 (ENSMNEG00000040298) #23	INMT (ENSMNEG00000036731)	MINDY4 (ENSMNEG00000022974) #24	AQP1 (ENSMNEG00000041376) #25	GHRHR (ENSMNEG00000043910) #26	ADCYAP1R1 (ENSMNEG00000043144) #27	NEUROD6 (ENSMNEG00000002324) #28	ITPRID1 (ENSMNEG00000043004)	PPP1R17 (ENSMNEG00000041897) #31	PDE1C (ENSMNEG00000008546) #32	ENSMNEG00000036069	ENSMNEG00000015331 #34	AVL9 (ENSMNEG00000039882) #35	ENSMNEG00000042348	ENSMNEG00000039454
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a.o #12	ENSGT00940000154534.b.b #13	ENSGT00910000147051	ENSGT00940000160267 #14	ENSGT00390000013474.b.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT01020000230346.F.t	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000000628.w.a.b	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000154172.hb	ENSGT00940000156069 #36
Cercopithecinae_d	ANCESTRAL SPECIES	10	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a.o #12	ENSGT00940000154534.b.b #13	ENSGT00910000147051	ENSGT00940000160267 #14	ENSGT00390000013474.b.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT01020000230346.F.t	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000000628.w.a.b	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000154172.hb	ENSGT00940000156069 #36
Sooty mangabey	MODERN SPECIES	98	CREB5 (ENSCATG00000039237) #9	TRIL (ENSCATG00000017105) #10	CPVL (ENSCATG00000000641) #11	CHN2 (ENSCATG00000038903) #12	PRR15 (ENSCATG00000017757) #13	ENSCATG00000044464	WIPF3 (ENSCATG00000040321) #14	SCRN1 (ENSCATG00000043113) #15	PLEKHA8 (ENSCATG00000029385) #17	FKBP14 (ENSCATG00000031169) #16	MTURN (ENSCATG00000029991) #18	ZNRF2 (ENSCATG00000043935) #19	ENSCATG00000031305	NOD1 (ENSCATG00000038597) #20	GGCT (ENSCATG00000024129) #21	GARS1 (ENSCATG00000036699) #22	CRHR2 (ENSCATG00000044419) #23	INMT (ENSCATG00000032476)	MINDY4 (ENSCATG00000005966) #24	AQP1 (ENSCATG00000015942) #25	GHRHR (ENSCATG00000042880) #26	ADCYAP1R1 (ENSCATG00000033504) #27	NEUROD6 (ENSCATG00000022132) #28	ITPRID1 (ENSCATG00000042778)	PDE1C (ENSCATG00000031111) #32	PPP1R17 (ENSCATG00000021623) #31	ENSCATG00000040486	ENSCATG00000040218 #34	AVL9 (ENSCATG00000040889) #35	ENSCATG00000034943	ENSCATG00000042918
Drill	MODERN SPECIES	322	CPVL (ENSMLEG00000041505) #11	CHN2 (ENSMLEG00000038612) #12	PRR15 (ENSMLEG00000025853) #13	ENSMLEG00000030247	ENSMLEG00000009545	WIPF3 (ENSMLEG00000043804) #14	SCRN1 (ENSMLEG00000037891) #15	FKBP14 (ENSMLEG00000033829) #16	PLEKHA8 (ENSMLEG00000033247) #17	MTURN (ENSMLEG00000043599) #18	ENSMLEG00000008978	ENSMLEG00000042553 #19	ENSMLEG00000043389	NOD1 (ENSMLEG00000035081) #20	GGCT (ENSMLEG00000031112) #21	GARS1 (ENSMLEG00000044430) #22	CRHR2 (ENSMLEG00000043615) #23	INMT (ENSMLEG00000043381)	MINDY4 (ENSMLEG00000042498) #24	AQP1 (ENSMLEG00000041635) #25	GHRHR (ENSMLEG00000033220) #26	ADCYAP1R1 (ENSMLEG00000022099) #27	NEUROD6 (ENSMLEG00000005111) #28	ITPRID1 (ENSMLEG00000005805)	PPP1R17 (ENSMLEG00000035479) #31	ENSMLEG00000027885	PDE1C (ENSMLEG00000036226) #32	ENSMLEG00000034427	ENSMLEG00000036611	ENSMLEG00000024945 #34	AVL9 (ENSMLEG00000031433) #35
Olive baboon	MODERN SPECIES	14	ENSPANG00000045027	CREB5 (ENSPANG00000025914) #9	TRIL (ENSPANG00000034493) #10	CPVL (ENSPANG00000006146) #11	CHN2 (ENSPANG00000023717) #12	ENSPANG00000045790	ENSPANG00000046085 #12	PRR15 (ENSPANG00000005817) #13	ENSPANG00000015023 #14	ENSPANG00000006256 #15	PLEKHA8 (ENSPANG00000008058) #17	ENSPANG00000006298 #18	ZNRF2 (ENSPANG00000015176) #19	NOD1 (ENSPANG00000010449) #20	GGCT (ENSPANG00000019769) #21	GARS1 (ENSPANG00000026231) #22	ENSPANG00000020688	INMT (ENSPANG00000023384)	MINDY4 (ENSPANG00000017321) #24	AQP1 (ENSPANG00000029920) #25	GHRHR (ENSPANG00000019771) #26	ADCYAP1R1 (ENSPANG00000000646) #27	NEUROD6 (ENSPANG00000000645) #28	ITPRID1 (ENSPANG00000006257)	ENSPANG00000038406 #31	PDE1C (ENSPANG00000023668) #32	ENSPANG00000016501	LSM5 (ENSPANG00000032179) #34	AVL9 (ENSPANG00000019773) #35	ENSPANG00000051043	ENSPANG00000048378
Vervet Monkey	MODERN SPECIES	13	TAX1BP1 (ENSCSAG00000014348) #7	JAZF1 (ENSCSAG00000014355) #8	CREB5 (ENSCSAG00000014360) #9	CPVL (ENSCSAG00000014372) #11	CHN2 (ENSCSAG00000014413) #12	PRR15 (ENSCSAG00000019606) #13	WIPF3 (ENSCSAG00000014442) #14	SCRN1 (ENSCSAG00000014463) #15	FKBP14 (ENSCSAG00000014478) #16	PLEKHA8 (ENSCSAG00000014494) #17	MTURN (ENSCSAG00000014501) #18	ZNRF2 (ENSCSAG00000014505) #19	NOD1 (ENSCSAG00000014514) #20	GGCT (ENSCSAG00000014526) #21	ENSCSAG00000014560	GARS1 (ENSCSAG00000014588) #22	CRHR2 (ENSCSAG00000014665) #23	INMT (ENSCSAG00000014685)	MINDY4 (ENSCSAG00000014753) #24	AQP1 (ENSCSAG00000014769) #25	GHRHR (ENSCSAG00000014774) #26	ADCYAP1R1 (ENSCSAG00000014781) #27	NEUROD6 (ENSCSAG00000019605) #28	ITPRID1 (ENSCSAG00000014801)	PPP1R17 (ENSCSAG00000014815) #31	PDE1C (ENSCSAG00000014827) #32	AVL9 (ENSCSAG00000014841) #35	ENSCSAG00000019604	KBTBD2 (ENSCSAG00000014849) #36	FKBP9 (ENSCSAG00000014855)	NT5C3A (ENSCSAG00000014863)
Rhinopithecus	ANCESTRAL SPECIES	605											ENSGT00910000148157	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00910000148563	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23
Golden snub-nosed monkey	MODERN SPECIES	1572												ENSRROG00000032472 ##19	NOD1 (ENSRROG00000010333) #20	GGCT (ENSRROG00000044531) #21	ENSRROG00000042052	GARS1 (ENSRROG00000044600) #22	CRHR2 (ENSRROG00000030729) #23
Black snub-nosed monkey	MODERN SPECIES	20											ENSRBIG00000029970	ENSRBIG00000030054 #19	NOD1 (ENSRBIG00000040082) #20	GGCT (ENSRBIG00000039810) #21	ENSRBIG00000044375	GARS1 (ENSRBIG00000040287) #22	CRHR2 (ENSRBIG00000027859) #23
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00860000135709	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288.g #17	ENSGT00940000157288.h #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Cebidae	ANCESTRAL SPECIES	9	ENSGT00390000003635 #8	ENSGT00860000135709	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288.g #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Cebidae_a	ANCESTRAL SPECIES	7	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288.g #17	ENSGT00940000157288.h #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.ab #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT01100000266832	ENSGT00940000157125
Capuchin	MODERN SPECIES	45	TAX1BP1 (ENSCCAG00000032690) #7	JAZF1 (ENSCCAG00000025827) #8	CREB5 (ENSCCAG00000028715) #9	TRIL (ENSCCAG00000003310) #10	CPVL (ENSCCAG00000037178) #11	ENSCCAG00000031849	CHN2 (ENSCCAG00000031145) #12	WIPF3 (ENSCCAG00000026498) #14	SCRN1 (ENSCCAG00000031678) #15	FKBP14 (ENSCCAG00000033075) #16	ENSCCAG00000036890 #17	MTURN (ENSCCAG00000028074) #18	ZNRF2 (ENSCCAG00000008527) #19	NOD1 (ENSCCAG00000024246) #20	GGCT (ENSCCAG00000022125) #21	GARS1 (ENSCCAG00000011512) #22	CRHR2 (ENSCCAG00000035721) #23	INMT (ENSCCAG00000029204)	MINDY4 (ENSCCAG00000024949) #24	AQP1 (ENSCCAG00000037277) #25	GHRHR (ENSCCAG00000033788) #26	ADCYAP1R1 (ENSCCAG00000023916) #27	NEUROD6 (ENSCCAG00000020510) #28	ITPRID1 (ENSCCAG00000031652)	PPP1R17 (ENSCCAG00000032684) #31	PDE1C (ENSCCAG00000034474) #32	LSM5 (ENSCCAG00000037808) #34	AVL9 (ENSCCAG00000032538) #35	KBTBD2 (ENSCCAG00000030563) #36	ENSCCAG00000027167	FKBP9 (ENSCCAG00000022568)
Bolivian squirrel monkey	MODERN SPECIES	112	TAX1BP1 (ENSSBOG00000021153) #7	JAZF1 (ENSSBOG00000031260) #8	ENSSBOG00000018196	CREB5 (ENSSBOG00000019829) #9	TRIL (ENSSBOG00000017304) #10	CPVL (ENSSBOG00000021419) #11	CHN2 (ENSSBOG00000023305) #12	WIPF3 (ENSSBOG00000022641) #14	SCRN1 (ENSSBOG00000034510) #15	FKBP14 (ENSSBOG00000032897) #16	PLEKHA8 (ENSSBOG00000020795) #17	MTURN (ENSSBOG00000033828) #18	ENSSBOG00000029979 #19	NOD1 (ENSSBOG00000032727) #20	GGCT (ENSSBOG00000029340) #21	GARS1 (ENSSBOG00000022287) #22	CRHR2 (ENSSBOG00000015505) #23	INMT (ENSSBOG00000032759)	MINDY4 (ENSSBOG00000031431) #24	AQP1 (ENSSBOG00000034401) #25	GHRHR (ENSSBOG00000027499) #26	ADCYAP1R1 (ENSSBOG00000021493) #27	NEUROD6 (ENSSBOG00000019702) #28	ITPRID1 (ENSSBOG00000019733)	PPP1R17 (ENSSBOG00000025843) #31	PDE1C (ENSSBOG00000025466) #32
Marmoset	MODERN SPECIES	20	CREB5 (ENSCJAG00000042700) #9	ENSCJAG00000076535	TRIL (ENSCJAG00000045826) #10	CPVL (ENSCJAG00000008379) #11	CHN2 (ENSCJAG00000008406) #12	ENSCJAG00000085693 #13	WIPF3 (ENSCJAG00000008466) #14	SCRN1 (ENSCJAG00000047722) #15	ENSCJAG00000052671 #16	PLEKHA8 (ENSCJAG00000008504) #17	MTURN (ENSCJAG00000040887) #18	ZNRF2 (ENSCJAG00000008540) #19	NOD1 (ENSCJAG00000008570) #20	GGCT (ENSCJAG00000008589) #21	ENSCJAG00000070306	GARS1 (ENSCJAG00000008595) #22	CRHR2 (ENSCJAG00000008694) #23	INMT (ENSCJAG00000008786)	MINDY4 (ENSCJAG00000008833) #24	GHRHR (ENSCJAG00000008846) #26	ADCYAP1R1 (ENSCJAG00000008919) #27	NEUROD6 (ENSCJAG00000008997) #28	ENSCJAG00000069949	ENSCJAG00000072784	ITPRID1 (ENSCJAG00000009007)	ENSCJAG00000080010	PPP1R17 (ENSCJAG00000046946) #31	ENSCJAG00000077011	ENSCJAG00000076036	ENSCJAG00000060337	ENSCJAG00000080124
Mas night monkey	MODERN SPECIES	317													ZNRF2 (ENSANAG00000034966) #19	NOD1 (ENSANAG00000032433) #20	GGCT (ENSANAG00000031250) #21	GARS1 (ENSANAG00000022536) #22	CRHR2 (ENSANAG00000021192) #23	INMT (ENSANAG00000034403)	MINDY4 (ENSANAG00000029462) #24	AQP1 (ENSANAG00000033044) #25	GHRHR (ENSANAG00000023004) #26	ADCYAP1R1 (ENSANAG00000034246) #27	NEUROD6 (ENSANAG00000019255) #28	ITPRID1 (ENSANAG00000037220)	PPP1R17 (ENSANAG00000013485) #31	PDE1C (ENSANAG00000033619) #32
Tarsier	MODERN SPECIES	1411													NOD1 (ENSTSYG00000001155) #20	GGCT (ENSTSYG00000001156) #21	ENSTSYG00000025595	GARS (ENSTSYG00000008538) #22	CRHR2 (ENSTSYG00000001674) #23
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b	ENSGT00940000162896
Mouse lemur	MODERN SPECIES	2	EVX1 (ENSMICG00000031887)	ENSMICG00000045251	TAX1BP1 (ENSMICG00000009923) #7	JAZF1 (ENSMICG00000009941) #8	CREB5 (ENSMICG00000007967) #9	CPVL (ENSMICG00000037854) #11	CHN2 (ENSMICG00000008142) #12	WIPF3 (ENSMICG00000012182) #14	SCRN1 (ENSMICG00000012191) #15	FKBP14 (ENSMICG00000036409) #16	PLEKHA8 (ENSMICG00000012195) #17	MTURN (ENSMICG00000007254) #18	ZNRF2 (ENSMICG00000045789) #19	NOD1 (ENSMICG00000012125) #20	GGCT (ENSMICG00000012142) #21	GARS1 (ENSMICG00000046006) #22	CRHR2 (ENSMICG00000012173) #23	MINDY4 (ENSMICG00000012202) #24	AQP1 (ENSMICG00000012214) #25	GHRHR (ENSMICG00000012951) #26	ADCYAP1R1 (ENSMICG00000012961) #27	NEUROD6 (ENSMICG00000012974) #28	ITPRID1 (ENSMICG00000038283)	PPP1R17 (ENSMICG00000000482) #31	PDE1C (ENSMICG00000044011) #32	ENSMICG00000005353 #34	AVL9 (ENSMICG00000030755) #35	KBTBD2 (ENSMICG00000034686) #36	ENSMICG00000047831	ENSMICG00000029673	FKBP9 (ENSMICG00000000720)
Lemuriformes_a	ANCESTRAL SPECIES	66	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00940000174400	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b	ENSGT00390000000803
Greater bamboo lemur	MODERN SPECIES	586	HIBADH (ENSPSMG00000014819)	TAX1BP1 (ENSPSMG00000015046) #7	CREB5 (ENSPSMG00000015364) #9	TRIL (ENSPSMG00000015395) #10	CPVL (ENSPSMG00000015408) #11	CHN2 (ENSPSMG00000015549) #12	PRR15 (ENSPSMG00000015605) #13	SCRN1 (ENSPSMG00000015640) #15	FKBP14 (ENSPSMG00000015651) #16	PLEKHA8 (ENSPSMG00000015863) #17	MTURN (ENSPSMG00000015941) #18	ZNRF2 (ENSPSMG00000015951) #19	ENSPSMG00000015960	NOD1 (ENSPSMG00000016010) #20	GGCT (ENSPSMG00000016046) #21	GARS1 (ENSPSMG00000016112) #22	CRHR2 (ENSPSMG00000016219) #23	MINDY4 (ENSPSMG00000016255) #24	AQP1 (ENSPSMG00000016283) #25	GHRHR (ENSPSMG00000016347) #26	ADCYAP1R1 (ENSPSMG00000016551) #27	NEUROD6 (ENSPSMG00000016606) #28	ITPRID1 (ENSPSMG00000016622)	PPP1R17 (ENSPSMG00000016644) #31	PDE1C (ENSPSMG00000016937) #32	ENSPSMG00000017088	LSM5 (ENSPSMG00000017111) #34	AVL9 (ENSPSMG00000017123) #35	KBTBD2 (ENSPSMG00000017156) #36	FKBP9 (ENSPSMG00000017173)	NT5C3A (ENSPSMG00000017186)
Coquerels sifaka	MODERN SPECIES	205	EVX1 (ENSPCOG00000024268)	HIBADH (ENSPCOG00000013985)	TAX1BP1 (ENSPCOG00000026109) #7	JAZF1 (ENSPCOG00000021884) #8	CREB5 (ENSPCOG00000023261) #9	CPVL (ENSPCOG00000028457) #11	CHN2 (ENSPCOG00000016056) #12	WIPF3 (ENSPCOG00000014419) #14	SCRN1 (ENSPCOG00000016737) #15	FKBP14 (ENSPCOG00000015275) #16	PLEKHA8 (ENSPCOG00000015946) #17	MTURN (ENSPCOG00000017910) #18	ZNRF2 (ENSPCOG00000021393) #19	NOD1 (ENSPCOG00000028472) #20	GGCT (ENSPCOG00000019077) #21	GARS1 (ENSPCOG00000008887) #22	CRHR2 (ENSPCOG00000020563) #23	MINDY4 (ENSPCOG00000022413) #24	AQP1 (ENSPCOG00000015885) #25	GHRHR (ENSPCOG00000017344) #26	ADCYAP1R1 (ENSPCOG00000019484) #27	NEUROD6 (ENSPCOG00000026275) #28
Bushbaby	MODERN SPECIES	143	JAZF1 (ENSOGAG00000029759) #8	CREB5 (ENSOGAG00000010246) #9	TRIL (ENSOGAG00000033323) #10	CPVL (ENSOGAG00000000026) #11	CHN2 (ENSOGAG00000005418) #12	PRR15 (ENSOGAG00000026096) #13	WIPF3 (ENSOGAG00000028020) #14	SCRN1 (ENSOGAG00000011046) #15	FKBP14 (ENSOGAG00000011049) #16	PLEKHA8 (ENSOGAG00000011052) #17	MTURN (ENSOGAG00000031721) #18	ZNRF2 (ENSOGAG00000033366) #19	ENSOGAG00000027182	NOD1 (ENSOGAG00000031455) #20	GGCT (ENSOGAG00000013316) #21	GARS1 (ENSOGAG00000013321) #22	CRHR2 (ENSOGAG00000013333) #23	INMT (ENSOGAG00000013337)	MINDY4 (ENSOGAG00000013343) #24	AQP1 (ENSOGAG00000001908) #25	GHRHR (ENSOGAG00000001909) #26	ADCYAP1R1 (ENSOGAG00000001910) #27	NEUROD6 (ENSOGAG00000001911) #28	ITPRID1 (ENSOGAG00000004080)	PPP1R17 (ENSOGAG00000004083) #31	PDE1C (ENSOGAG00000004084) #32	ENSOGAG00000028820	LSM5 (ENSOGAG00000013892) #34	AVL9 (ENSOGAG00000033819) #35	ENSOGAG00000027785	KBTBD2 (ENSOGAG00000001585) #36
Laurasiatheria	ANCESTRAL SPECIES	22	ENSGT00390000003635 #8	ENSGT00940000171365	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000009586	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000153759.a.a #22
Common shrew	MODERN SPECIES	561																ENSSARG00000008410 #22
Hedgehog	MODERN SPECIES	958																GARS1 (ENSEEUG00000010646) #22
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00390000003635 #8	ENSGT00940000171365	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000009586	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00390000003635 #8	ENSGT00940000171365	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000009586	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000162490.q.a.a
Chiroptera	ANCESTRAL SPECIES	24	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162896	ENSGT00940000162490.q.a.a	ENSGT00940000157125
Microchiroptera	ANCESTRAL SPECIES	24	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162896	ENSGT00940000162490.q.a.a	ENSGT00940000157125
Greater horseshoe bat	MODERN SPECIES	12	JAZF1 (ENSRFEG00010021278) #8	CREB5 (ENSRFEG00010021242) #9	TRIL (ENSRFEG00010021231) #10	CPVL (ENSRFEG00010021218) #11	CHN2 (ENSRFEG00010021162) #12	ENSRFEG00010021129 #13	WIPF3 (ENSRFEG00010021120) #14	SCRN1 (ENSRFEG00010021103) #15	FKBP14 (ENSRFEG00010021084) #16	PLEKHA8 (ENSRFEG00010021060) #17	ENSRFEG00010021050	MTURN (ENSRFEG00010021039) #18	ZNRF2 (ENSRFEG00010021012) #19	NOD1 (ENSRFEG00010020992) #20	GGCT (ENSRFEG00010020972) #21	GARS1 (ENSRFEG00010020949) #22	CRHR2 (ENSRFEG00010020901) #23	MINDY4 (ENSRFEG00010020856) #24	AQP1 (ENSRFEG00010020837) #25	GHRHR (ENSRFEG00010020794) #26	ADCYAP1R1 (ENSRFEG00010020680) #27	NEUROD6 (ENSRFEG00010020614) #28	ENSRFEG00010020605	ITPRID1 (ENSRFEG00010020562)	PPP1R17 (ENSRFEG00010020521) #31	PDE1C (ENSRFEG00010020439) #32	ENSRFEG00010020361 #34	AVL9 (ENSRFEG00010020290) #35	KBTBD2 (ENSRFEG00010020267) #36	FKBP9 (ENSRFEG00010020183)	NT5C3A (ENSRFEG00010020078)
Microbat	MODERN SPECIES	989	TAX1BP1 (ENSMLUG00000013116) #7	JAZF1 (ENSMLUG00000013130) #8	CREB5 (ENSMLUG00000013799) #9	TRIL (ENSMLUG00000026172) #10	CPVL (ENSMLUG00000013805) #11	ENSMLUG00000013813 #12	PRR15 (ENSMLUG00000007234) #13	WIPF3 (ENSMLUG00000022962) #14	SCRN1 (ENSMLUG00000007693) #15	FKBP14 (ENSMLUG00000007705) #16	PLEKHA8 (ENSMLUG00000007725) #17	MTURN (ENSMLUG00000007746) #18	ENSMLUG00000024304 #19	NOD1 (ENSMLUG00000002033) #20	GGCT (ENSMLUG00000002039) #21	GARS1 (ENSMLUG00000002043) #22	CRHR2 (ENSMLUG00000017757) #23	MINDY4 (ENSMLUG00000017758) #24	AQP1 (ENSMLUG00000017759) #25	GHRHR (ENSMLUG00000009806) #26	ADCYAP1R1 (ENSMLUG00000017760) #27	NEUROD6 (ENSMLUG00000017761) #28	ITPRID1 (ENSMLUG00000025643)	PPP1R17 (ENSMLUG00000002065) #31	PDE1C (ENSMLUG00000002071) #32	LSM5 (ENSMLUG00000017028) #34	CD36 (ENSMLUG00000024832)	GNAT3 (ENSMLUG00000022704)	ENSMLUG00000026142	GNAI1 (ENSMLUG00000005305)
Megabat	MODERN SPECIES	3331															GGCT (ENSPVAG00000013563) #21	GARS1 (ENSPVAG00000013565) #22	CRHR2 (ENSPVAG00000013566) #23
Equus	ANCESTRAL SPECIES	13	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000157125
Horse	MODERN SPECIES	25	TAX1BP1 (ENSECAG00000001911) #7	JAZF1 (ENSECAG00000016817) #8	ENSECAG00000055789 #9	CREB5 (ENSECAG00000020180) #9	TRIL (ENSECAG00000020808) #10	CPVL (ENSECAG00000024795) #11	CHN2 (ENSECAG00000012830) #12	WIPF3 (ENSECAG00000022875) #14	SCRN1 (ENSECAG00000023241) #15	FKBP14 (ENSECAG00000024710) #16	PLEKHA8 (ENSECAG00000007737) #17	ENSECAG00000038623 #18	ZNRF2 (ENSECAG00000013800) #19	NOD1 (ENSECAG00000013825) #20	GGCT (ENSECAG00000017845) #21	GARS1 (ENSECAG00000019373) #22	CRHR2 (ENSECAG00000025098) #23	INMT (ENSECAG00000014579)	MINDY4 (ENSECAG00000016135) #24	AQP1 (ENSECAG00000008979) #25	GHRHR (ENSECAG00000015021) #26	ADCYAP1R1 (ENSECAG00000007388) #27	NEUROD6 (ENSECAG00000020776) #28	ITPRID1 (ENSECAG00000021252)	PPP1R17 (ENSECAG00000021847) #31	PDE1C (ENSECAG00000021914) #32	ENSECAG00000016905	AVL9 (ENSECAG00000019332) #35	KBTBD2 (ENSECAG00000024001) #36	ENSECAG00000040668	ENSECAG00000037047
Donkey	MODERN SPECIES		ENSEASG00005000084	ENSEASG00005000155 #7	JAZF1 (ENSEASG00005024824) #8	CREB5 (ENSEASG00005000178) #9	TRIL (ENSEASG00005026075) #10	CPVL (ENSEASG00005000218) #11	CHN2 (ENSEASG00005000230) #12	PRR15 (ENSEASG00005027816) #13	SCRN1 (ENSEASG00005000315) #15	FKBP14 (ENSEASG00005000321) #16	PLEKHA8 (ENSEASG00005000323) #17	MTURN (ENSEASG00005024315) #18	ZNRF2 (ENSEASG00005000332) #19	NOD1 (ENSEASG00005000357) #20	GGCT (ENSEASG00005026839) #21	GARS1 (ENSEASG00005000388) #22	CRHR2 (ENSEASG00005000393) #23	ENSEASG00005000400	INMT (ENSEASG00005026974)	MINDY4 (ENSEASG00005000425) #24	AQP1 (ENSEASG00005023732) #25	GHRHR (ENSEASG00005000476) #26	ADCYAP1R1 (ENSEASG00005000592) #27	NEUROD6 (ENSEASG00005038386) #28	ITPRID1 (ENSEASG00005000608)	PPP1R17 (ENSEASG00005000621) #31	PDE1C (ENSEASG00005000855) #32	ENSEASG00005003496	LSM5 (ENSEASG00005035943) #34	AVL9 (ENSEASG00005003524) #35	KBTBD2 (ENSEASG00005003567) #36
Carnivora	ANCESTRAL SPECIES	15	ENSGT00390000003635 #8	ENSGT00940000171365	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000009586	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000162490.r
Caniformia	ANCESTRAL SPECIES	11	ENSGT00390000003635 #8	ENSGT00940000171365	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000009586	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000162490.r
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT00950000186003	ENSGT00950000183025.b.a.l #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000009586	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000162490.r
Ursidae	ANCESTRAL SPECIES	12	ENSGT00950000186003	ENSGT00950000183025.b.a.l #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015.b #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000162490.r	ENSGT00950000186295
Ursus	ANCESTRAL SPECIES	31	ENSGT00950000186003	ENSGT00950000183025.b.a.l #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015.b #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000162490.r.a	ENSGT00950000186295
American black bear	MODERN SPECIES	3129																GARS1 (ENSUAMG00000016756) #22	CRHR2 (ENSUAMG00000016762) #23	ENSUAMG00000016772 #24
Polar bear	MODERN SPECIES	133	HIBADH (ENSUMAG00000001860)	ENSUMAG00000001866	ENSUMAG00000001876 #7	JAZF1 (ENSUMAG00000001899) #8	CREB5 (ENSUMAG00000001930) #9	CPVL (ENSUMAG00000001960) #11	CHN2 (ENSUMAG00000001969) #12	PRR15 (ENSUMAG00000001973) #13	WIPF3 (ENSUMAG00000001992) #14	SCRN1 (ENSUMAG00000002056) #15	FKBP14 (ENSUMAG00000002067) #16	PLEKHA8 (ENSUMAG00000002071) #17	ENSUMAG00000002092 #19	ENSUMAG00000002104 #20	GGCT (ENSUMAG00000002110) #21	GARS1 (ENSUMAG00000002158) #22	CRHR2 (ENSUMAG00000002417) #23	MINDY4 (ENSUMAG00000002463) #24	AQP1 (ENSUMAG00000002481) #25	GHRHR (ENSUMAG00000002490) #26	ADCYAP1R1 (ENSUMAG00000002510) #27	NEUROD6 (ENSUMAG00000002538) #28	ITPRID1 (ENSUMAG00000002550)	PPP1R17 (ENSUMAG00000002578) #31	PDE1C (ENSUMAG00000002611) #32	LSM5 (ENSUMAG00000002625) #34	AVL9 (ENSUMAG00000002658) #35	KBTBD2 (ENSUMAG00000002778) #36	ENSUMAG00000002781	ENSUMAG00000002784	ENSUMAG00000002789
Giant Panda	MODERN SPECIES		HOXA13 (ENSAMEG00000024587)	ENSAMEG00000031450	HIBADH (ENSAMEG00000005849)	TAX1BP1 (ENSAMEG00000005802) #7	JAZF1 (ENSAMEG00000005798) #8	CREB5 (ENSAMEG00000005779) #9	CPVL (ENSAMEG00000005728) #11	CHN2 (ENSAMEG00000005686) #12	PRR15 (ENSAMEG00000018679) #13	WIPF3 (ENSAMEG00000027321) #14	SCRN1 (ENSAMEG00000005663) #15	FKBP14 (ENSAMEG00000006603) #16	PLEKHA8 (ENSAMEG00000006614) #17	ENSAMEG00000006628 #19	NOD1 (ENSAMEG00000006630) #20	GARS1 (ENSAMEG00000006652) #22	GGCT (ENSAMEG00000006649) #21	CRHR2 (ENSAMEG00000006692) #23	MINDY4 (ENSAMEG00000006726) #24	AQP1 (ENSAMEG00000029142) #25	GHRHR (ENSAMEG00000006760) #26	ADCYAP1R1 (ENSAMEG00000006834) #27	NEUROD6 (ENSAMEG00000019439) #28	ITPRID1 (ENSAMEG00000006939)	PPP1R17 (ENSAMEG00000023474) #31	PDE1C (ENSAMEG00000006976) #32	LSM5 (ENSAMEG00000028205) #34	AVL9 (ENSAMEG00000006679) #35	KBTBD2 (ENSAMEG00000006674) #36	ENSAMEG00000027246	ENSAMEG00000006662
Mustelinae	ANCESTRAL SPECIES	9	ENSGT00940000155255	ENSGT00950000183025.b.a.k #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000009586	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162490.r	ENSGT00940000157125
American mink	MODERN SPECIES	24	TAX1BP1 (ENSNVIG00000011815) #7	JAZF1 (ENSNVIG00000011775) #8	CREB5 (ENSNVIG00000011671) #9	TRIL (ENSNVIG00000011660) #10	CPVL (ENSNVIG00000011645) #11	CHN2 (ENSNVIG00000011534) #12	ENSNVIG00000011513 #13	ENSNVIG00000011507	WIPF3 (ENSNVIG00000011443) #14	SCRN1 (ENSNVIG00000011369) #15	FKBP14 (ENSNVIG00000011355) #16	CG041 (ENSNVIG00000011260) #17	ENSNVIG00000011234 #19	NOD1 (ENSNVIG00000011176) #20	GGCT (ENSNVIG00000011154) #21	GARS1 (ENSNVIG00000011122) #22	CRHR2 (ENSNVIG00000011060) #23	MINDY4 (ENSNVIG00000011021) #24	AQP1 (ENSNVIG00000011011) #25	GHRHR (ENSNVIG00000011002) #26	ADCYAP1R1 (ENSNVIG00000010822) #27	ENSNVIG00000010733	PPP1R17 (ENSNVIG00000010706) #31	PDE1C (ENSNVIG00000010659) #32	LSM5 (ENSNVIG00000010643) #34	AVL9 (ENSNVIG00000010593) #35	KBTBD2 (ENSNVIG00000010578) #36	ENSNVIG00000010567	FKBP9 (ENSNVIG00000010543)	NT5C3A (ENSNVIG00000010497)	ENSNVIG00000010484
Ferret	MODERN SPECIES	251	HIBADH (ENSMPUG00000004863)	TAX1BP1 (ENSMPUG00000004870) #7	JAZF1 (ENSMPUG00000004887) #8	CREB5 (ENSMPUG00000004897) #9	TRIL (ENSMPUG00000019606) #10	CPVL (ENSMPUG00000004911) #11	CHN2 (ENSMPUG00000004923) #12	PRR15 (ENSMPUG00000019608) #13	WIPF3 (ENSMPUG00000004936) #14	SCRN1 (ENSMPUG00000004979) #15	FKBP14 (ENSMPUG00000005010) #16	PLEKHA8 (ENSMPUG00000005019) #17	ENSMPUG00000005068	NOD1 (ENSMPUG00000005071) #20	GGCT (ENSMPUG00000005083) #21	GARS1 (ENSMPUG00000005116) #22	CRHR2 (ENSMPUG00000005127) #23	ENSMPUG00000005139	MINDY4 (ENSMPUG00000005142) #24	ENSMPUG00000005158	AQP1 (ENSMPUG00000005163) #25	GHRHR (ENSMPUG00000005166) #26	ADCYAP1R1 (ENSMPUG00000005344) #27	ENSMPUG00000005366	NEUROD6 (ENSMPUG00000005372) #28	ITPRID1 (ENSMPUG00000005381)	PPP1R17 (ENSMPUG00000005400) #31	PDE1C (ENSMPUG00000005422) #32	ENSMPUG00000005435	ENSMPUG00000005443	ENSMPUG00000005453
Canidae	ANCESTRAL SPECIES	22	ENSGT00390000003635 #8	ENSGT00940000171365	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000162490.r	ENSGT00940000157125
Canis_lupus	ANCESTRAL SPECIES	24	ENSGT00950000183025.b.a.k #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000162896	ENSGT00940000157125
Dog	MODERN SPECIES	5	ENSCAFG00845016422	TAX1BP1 (ENSCAFG00845016842) #7	JAZF1 (ENSCAFG00845017060) #8	CREB5 (ENSCAFG00845017224) #9	TRIL (ENSCAFG00845017572) #10	CPVL (ENSCAFG00845017697) #11	CHN2 (ENSCAFG00845017921) #12	PRR15 (ENSCAFG00845018408) #13	WIPF3 (ENSCAFG00845018436) #14	SCRN1 (ENSCAFG00845018594) #15	PLEKHA8 (ENSCAFG00845018943) #17	MTURN (ENSCAFG00845019257) #18	ZNRF2 (ENSCAFG00845019324) #19	NOD1 (ENSCAFG00845019451) #20	GGCT (ENSCAFG00845019644) #21	GARS1 (ENSCAFG00845019772) #22	CRHR2 (ENSCAFG00845020144) #23	MINDY4 (ENSCAFG00845020428) #24	AQP1 (ENSCAFG00845020628) #25	GHRHR (ENSCAFG00845020695) #26	ADCYAP1R1 (ENSCAFG00845020886) #27	NEUROD6 (ENSCAFG00845021439) #28	ITPRID1 (ENSCAFG00845021501)	PPP1R17 (ENSCAFG00845021714) #31	PDE1C (ENSCAFG00845022048) #32	LSM5 (ENSCAFG00845022662) #34	AVL9 (ENSCAFG00845022792) #35	KBTBD2 (ENSCAFG00845023121) #36	ENSCAFG00845023161	ENSCAFG00845023264	FKBP9 (ENSCAFG00845023469)
Dingo	MODERN SPECIES	288	TAX1BP1 (ENSCAFG00020003692) #7	JAZF1 (ENSCAFG00020003862) #8	CREB5 (ENSCAFG00020003878) #9	TRIL (ENSCAFG00020003910) #10	CPVL (ENSCAFG00020003917) #11	CHN2 (ENSCAFG00020003953) #12	PRR15 (ENSCAFG00020004111) #13	WIPF3 (ENSCAFG00020004130) #14	SCRN1 (ENSCAFG00020004142) #15	FKBP14 (ENSCAFG00020004157) #16	PLEKHA8 (ENSCAFG00020004164) #17	MTURN (ENSCAFG00020004237) #18	ZNRF2 (ENSCAFG00020004252) #19	NOD1 (ENSCAFG00020004264) #20	GGCT (ENSCAFG00020004269) #21	GARS1 (ENSCAFG00020004272) #22	CRHR2 (ENSCAFG00020004288) #23	MINDY4 (ENSCAFG00020004318) #24	AQP1 (ENSCAFG00020004359) #25	GHRHR (ENSCAFG00020004373) #26	ADCYAP1R1 (ENSCAFG00020004417) #27	NEUROD6 (ENSCAFG00020004640) #28	ITPRID1 (ENSCAFG00020004648)	PPP1R17 (ENSCAFG00020004652) #31	PDE1C (ENSCAFG00020004721) #32	ENSCAFG00020004937	LSM5 (ENSCAFG00020004946) #34	AVL9 (ENSCAFG00020004955) #35	KBTBD2 (ENSCAFG00020005032) #36	ENSCAFG00020005039	ENSCAFG00020005048
Red fox	MODERN SPECIES	161												ENSVVUG00000020972 #19	ENSVVUG00000020973	NOD1 (ENSVVUG00000020977) #20	GGCT (ENSVVUG00000020980) #21	GARS1 (ENSVVUG00000020981) #22	CRHR2 (ENSVVUG00000020988) #23	MINDY4 (ENSVVUG00000021211) #24	ENSVVUG00000021228	AQP1 (ENSVVUG00000021230) #25	ENSVVUG00000021231	GHRHR (ENSVVUG00000021235) #26	ADCYAP1R1 (ENSVVUG00000021259) #27	NEUROD6 (ENSVVUG00000021270) #28	ITPRID1 (ENSVVUG00000021275)	PPP1R17 (ENSVVUG00000021287) #31	PDE1C (ENSVVUG00000021293) #32	LSM5 (ENSVVUG00000021311) #34	AVL9 (ENSVVUG00000021315) #35	KBTBD2 (ENSVVUG00000021321) #36	ENSVVUG00000021325
Felidae	ANCESTRAL SPECIES	13	ENSGT00950000183025.b.a.i.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00940000157125	ENSGT00390000012959.b.x
Panthera	ANCESTRAL SPECIES	1	ENSGT00950000183025.b.a.i.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00950000182967.a.a.a.a.b.a	ENSGT00940000157125
Tiger	MODERN SPECIES	325							CHN2 (ENSPTIG00000016296) #12	WIPF3 (ENSPTIG00000016257) #14	SCRN1 (ENSPTIG00000016211) #15	FKBP14 (ENSPTIG00000016198) #16	PLEKHA8 (ENSPTIG00000016158) #17	MTURN (ENSPTIG00000016146) #18	ENSPTIG00000016140 #19	NOD1 (ENSPTIG00000016128) #20	GGCT (ENSPTIG00000016116) #21	GARS1 (ENSPTIG00000016096) #22	CRHR2 (ENSPTIG00000016084) #23	MINDY4 (ENSPTIG00000016063) #24	AQP1 (ENSPTIG00000016042) #25	GHRHR (ENSPTIG00000016025) #26	ADCYAP1R1 (ENSPTIG00000015887) #27	NEUROD6 (ENSPTIG00000009284) #28	ITPRID1 (ENSPTIG00000015802)	PPP1R17 (ENSPTIG00000015787) #31	PDE1C (ENSPTIG00000015660) #32	LSM5 (ENSPTIG00000015604) #34	AVL9 (ENSPTIG00000015565) #35	KBTBD2 (ENSPTIG00000015551) #36	ENSPTIG00000015541	ENSPTIG00000015538	FKBP9 (ENSPTIG00000015528)
Panthera_a	ANCESTRAL SPECIES		ENSGT00950000183025.b.a.i.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00950000182967.a.a.a.a.b.a	ENSGT00940000157125
leopard	MODERN SPECIES	9	ENSPPRG00000006141 #7	JAZF1 (ENSPPRG00000002975) #8	CREB5 (ENSPPRG00000002554) #9	TRIL (ENSPPRG00000018769) #10	CPVL (ENSPPRG00000022917) #11	CHN2 (ENSPPRG00000016803) #12	PRR15 (ENSPPRG00000018667) #13	WIPF3 (ENSPPRG00000011937) #14	SCRN1 (ENSPPRG00000011037) #15	FKBP14 (ENSPPRG00000009466) #16	PLEKHA8 (ENSPPRG00000008566) #17	MTURN (ENSPPRG00000005384) #18	ZNRF2 (ENSPPRG00000005250) #19	NOD1 (ENSPPRG00000004102) #20	GGCT (ENSPPRG00000002899) #21	GARS1 (ENSPPRG00000001917) #22	CRHR2 (ENSPPRG00000001386) #23	MINDY4 (ENSPPRG00000000062) #24	AQP1 (ENSPPRG00000022885) #25	GHRHR (ENSPPRG00000023498) #26	ADCYAP1R1 (ENSPPRG00000020037) #27	ENSPPRG00000018044	NEUROD6 (ENSPPRG00000018001) #28	ITPRID1 (ENSPPRG00000012630)	PPP1R17 (ENSPPRG00000008564) #31	PDE1C (ENSPPRG00000007898) #32	LSM5 (ENSPPRG00000002550) #34	AVL9 (ENSPPRG00000001859) #35	KBTBD2 (ENSPPRG00000022634) #36	ENSPPRG00000023197	ENSPPRG00000023351
lion	MODERN SPECIES	2	ENSPLOG00000007659	ENSPLOG00000007719 #7	JAZF1 (ENSPLOG00000008017) #8	CREB5 (ENSPLOG00000008070) #9	TRIL (ENSPLOG00000008245) #10	CPVL (ENSPLOG00000008266) #11	CHN2 (ENSPLOG00000008386) #12	PRR15 (ENSPLOG00000008701) #13	WIPF3 (ENSPLOG00000008722) #14	SCRN1 (ENSPLOG00000008823) #15	FKBP14 (ENSPLOG00000008899) #16	PLEKHA8 (ENSPLOG00000008968) #17	MTURN (ENSPLOG00000009177) #18	ZNRF2 (ENSPLOG00000009209) #19	NOD1 (ENSPLOG00000009282) #20	GARS1 (ENSPLOG00000009355) #22	CRHR2 (ENSPLOG00000009489) #23	MINDY4 (ENSPLOG00000009685) #24	GHRHR (ENSPLOG00000009787) #26	ADCYAP1R1 (ENSPLOG00000009903) #27	NEUROD6 (ENSPLOG00000010242) #28	ITPRID1 (ENSPLOG00000010278)	ENSPLOG00000000110	PPP1R17 (ENSPLOG00000000165) #31	PDE1C (ENSPLOG00000000223) #32	ENSPLOG00000000386 #34	AVL9 (ENSPLOG00000000418) #35	KBTBD2 (ENSPLOG00000000445) #36	ENSPLOG00000000471	ENSPLOG00000000498	FKBP9 (ENSPLOG00000000525)
Cat	MODERN SPECIES	1	HIBADH (ENSFCAG00000022490)	ENSFCAG00000042564	TAX1BP1 (ENSFCAG00000006903) #7	JAZF1 (ENSFCAG00000023035) #8	CREB5 (ENSFCAG00000015784) #9	TRIL (ENSFCAG00000044042) #10	CPVL (ENSFCAG00000011225) #11	CHN2 (ENSFCAG00000008416) #12	WIPF3 (ENSFCAG00000043271) #14	SCRN1 (ENSFCAG00000037639) #15	PLEKHA8 (ENSFCAG00000002417) #17	MTURN (ENSFCAG00000045461) #18	ZNRF2 (ENSFCAG00000026521) #19	NOD1 (ENSFCAG00000012184) #20	GGCT (ENSFCAG00000009417) #21	GARS1 (ENSFCAG00000011415) #22	CRHR2 (ENSFCAG00000011417) #23	MINDY4 (ENSFCAG00000011419) #24	AQP1 (ENSFCAG00000027043) #25	GHRHR (ENSFCAG00000002543) #26	ADCYAP1R1 (ENSFCAG00000002544) #27	NEUROD6 (ENSFCAG00000026161) #28	ITPRID1 (ENSFCAG00000000212)	PPP1R17 (ENSFCAG00000033490) #31	PDE1C (ENSFCAG00000000214) #32	LSM5 (ENSFCAG00000000230) #34	AVL9 (ENSFCAG00000007667) #35	KBTBD2 (ENSFCAG00000024550) #36	ENSFCAG00000044398	ENSFCAG00000027997	ENSFCAG00000039827
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000162490.r
Suina	ANCESTRAL SPECIES	19	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Pig	MODERN SPECIES	9	TAX1BP1 (ENSSSCG00000016692) #7	JAZF1 (ENSSSCG00000016691) #8	CREB5 (ENSSSCG00000016690) #9	CPVL (ENSSSCG00000016688) #11	ENSSSCG00000060851 #12	CHN2 (ENSSSCG00000016687) #12	PRR15 (ENSSSCG00000016686) #13	WIPF3 (ENSSSCG00000016685) #14	SCRN1 (ENSSSCG00000016684) #15	FKBP14 (ENSSSCG00000037575) #16	PLEKHA8 (ENSSSCG00000016682) #17	MTURN (ENSSSCG00000037158) #18	ENSSSCG00000054340	ZNRF2 (ENSSSCG00000037116) #19	GGCT (ENSSSCG00000016679) #21	GARS1 (ENSSSCG00000016677) #22	CRHR2 (ENSSSCG00000033514) #23	INMT (ENSSSCG00000016676)	MINDY4 (ENSSSCG00000016674) #24	AQP1 (ENSSSCG00000033190) #25	GHRHR (ENSSSCG00000016673) #26	ADCYAP1R1 (ENSSSCG00000016672) #27	NEUROD6 (ENSSSCG00000039501) #28	ITPRID1 (ENSSSCG00000016671)	PDE1C (ENSSSCG00000016668) #32	LSM5 (ENSSSCG00000026064) #34	ENSSSCG00000043449	ENSSSCG00000047223	AVL9 (ENSSSCG00000023445) #35	KBTBD2 (ENSSSCG00000022464) #36	RP9 (ENSSSCG00000038919)
Chacoan peccary	MODERN SPECIES	77	HIBADH (ENSCWAG00000009934)	TAX1BP1 (ENSCWAG00000009701) #7	JAZF1 (ENSCWAG00000009634) #8	CREB5 (ENSCWAG00000009365) #9	TRIL (ENSCWAG00000009328) #10	CPVL (ENSCWAG00000009183) #11	ENSCWAG00000009158	CHN2 (ENSCWAG00000007934) #12	SCRN1 (ENSCWAG00000007734) #15	FKBP14 (ENSCWAG00000007700) #16	PLEKHA8 (ENSCWAG00000007664) #17	MTURN (ENSCWAG00000007643) #18	ZNRF2 (ENSCWAG00000007613) #19	NOD1 (ENSCWAG00000007590) #20	GGCT (ENSCWAG00000007523) #21	GARS1 (ENSCWAG00000007474) #22	CRHR2 (ENSCWAG00000007212) #23	ENSCWAG00000007178	MINDY4 (ENSCWAG00000007149) #24	AQP1 (ENSCWAG00000007098) #25	GHRHR (ENSCWAG00000007024) #26	ADCYAP1R1 (ENSCWAG00000006449) #27	NEUROD6 (ENSCWAG00000006371) #28	ITPRID1 (ENSCWAG00000006168)	PPP1R17 (ENSCWAG00000006118) #31	PDE1C (ENSCWAG00000006004) #32	LSM5 (ENSCWAG00000005949) #34	AVL9 (ENSCWAG00000005712) #35	KBTBD2 (ENSCWAG00000005669) #36	ENSCWAG00000005540	FKBP9 (ENSCWAG00000005454)
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000162490.r
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000162490.r	ENSGT00940000157125
Cetacea	ANCESTRAL SPECIES	13	ENSGT00950000183025.b.a.h #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00550000075120.j	ENSGT00940000156069 #36	ENSGT00940000162896.d
Odontoceti	ANCESTRAL SPECIES	12	ENSGT00950000183025.b.a.h #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00550000075120.j	ENSGT00940000156069 #36	ENSGT00940000162896.d
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT00950000183025.b.a.h #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00550000075120.j	ENSGT00940000156069 #36	ENSGT00940000162896.d
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT00950000183025.b.a.h #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00550000075120.j	ENSGT00940000156069 #36	ENSGT00940000162896.d	ENSGT00940000162490.r
Monodontidae	ANCESTRAL SPECIES	12	ENSGT00950000183025.b.a.h #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00550000075120.j	ENSGT00940000156069 #36	ENSGT00940000162896.d	ENSGT00940000157125
Beluga whale	MODERN SPECIES	72	TAX1BP1 (ENSDLEG00000009131) #7	JAZF1 (ENSDLEG00000009079) #8	CREB5 (ENSDLEG00000009000) #9	TRIL (ENSDLEG00000008983) #10	CPVL (ENSDLEG00000008886) #11	CHN2 (ENSDLEG00000008545) #12	PRR15 (ENSDLEG00000008475) #13	WIPF3 (ENSDLEG00000008424) #14	SCRN1 (ENSDLEG00000008386) #15	FKBP14 (ENSDLEG00000008350) #16	PLEKHA8 (ENSDLEG00000008244) #17	MTURN (ENSDLEG00000008214) #18	ZNRF2 (ENSDLEG00000008178) #19	NOD1 (ENSDLEG00000008116) #20	GGCT (ENSDLEG00000008097) #21	GARS (ENSDLEG00000008043) #22	CRHR2 (ENSDLEG00000008002) #23	ENSDLEG00000007979	MINDY4 (ENSDLEG00000007950) #24	AQP1 (ENSDLEG00000007927) #25	GHRHR (ENSDLEG00000014291) #26	ADCYAP1R1 (ENSDLEG00000014247) #27	NEUROD6 (ENSDLEG00000014241) #28	PPP1R17 (ENSDLEG00000014232) #31	PDE1C (ENSDLEG00000014086) #32	AVL9 (ENSDLEG00000014036) #35	ENSDLEG00000014025	KBTBD2 (ENSDLEG00000014015) #36	ENSDLEG00000014002	FKBP9 (ENSDLEG00000013984)	NT5C3A (ENSDLEG00000013952)
Narwhal	MODERN SPECIES	306	TAX1BP1 (ENSMMNG00015006389) #7	JAZF1 (ENSMMNG00015006424) #8	CREB5 (ENSMMNG00015006474) #9	TRIL (ENSMMNG00015006537) #10	CPVL (ENSMMNG00015006550) #11	CHN2 (ENSMMNG00015006621) #12	PRR15 (ENSMMNG00015006804) #13	WIPF3 (ENSMMNG00015006818) #14	SCRN1 (ENSMMNG00015006859) #15	FKBP14 (ENSMMNG00015006893) #16	PLEKHA8 (ENSMMNG00015006919) #17	MTURN (ENSMMNG00015006945) #18	ZNRF2 (ENSMMNG00015006956) #19	NOD1 (ENSMMNG00015006972) #20	GGCT (ENSMMNG00015006996) #21	GARS1 (ENSMMNG00015007026) #22	CRHR2 (ENSMMNG00015007155) #23	ENSMMNG00015007307	MINDY4 (ENSMMNG00015007372) #24	AQP1 (ENSMMNG00015007423) #25	GHRHR (ENSMMNG00015007452) #26	ADCYAP1R1 (ENSMMNG00015007584) #27	NEUROD6 (ENSMMNG00015007774) #28	PPP1R17 (ENSMMNG00015007788) #31	PDE1C (ENSMMNG00015007897) #32	ENSMMNG00015008138	LSM5 (ENSMMNG00015008148) #34	AVL9 (ENSMMNG00015008172) #35	ENSMMNG00015008204	KBTBD2 (ENSMMNG00015008211) #36	ENSMMNG00015008226
Vaquita	MODERN SPECIES	20	JAZF1 (ENSPSNG00000013601) #8	CREB5 (ENSPSNG00000013240) #9	TRIL (ENSPSNG00000013162) #10	CPVL (ENSPSNG00000012990) #11	CHN2 (ENSPSNG00000012608) #12	PRR15 (ENSPSNG00000012523) #13	WIPF3 (ENSPSNG00000012347) #14	SCRN1 (ENSPSNG00000012165) #15	FKBP14 (ENSPSNG00000012087) #16	PLEKHA8 (ENSPSNG00000011889) #17	MTURN (ENSPSNG00000011778) #18	ZNRF2 (ENSPSNG00000011720) #19	NOD1 (ENSPSNG00000011664) #20	GGCT (ENSPSNG00000011514) #21	ENSPSNG00000011481	GARS1 (ENSPSNG00000011425) #22	CRHR2 (ENSPSNG00000010854) #23	ENSPSNG00000010726	ENSPSNG00000010679	MINDY4 (ENSPSNG00000010512) #24	AQP1 (ENSPSNG00000010435) #25	GHRHR (ENSPSNG00000010295) #26	ADCYAP1R1 (ENSPSNG00000009513) #27	NEUROD6 (ENSPSNG00000009226) #28	PPP1R17 (ENSPSNG00000009180) #31	PDE1C (ENSPSNG00000008933) #32	LSM5 (ENSPSNG00000008827) #34	AVL9 (ENSPSNG00000008762) #35	ENSPSNG00000008722	KBTBD2 (ENSPSNG00000008688) #36	ENSPSNG00000008646
Dolphin	MODERN SPECIES	3295																GARS1 (ENSTTRG00000000334) #22	CRHR2 (ENSTTRG00000000337) #23	MINDY4 (ENSTTRG00000000339) #24	AQP1 (ENSTTRG00000000342) #25	GHRHR (ENSTTRG00000000343) #26	ADCYAP1R1 (ENSTTRG00000000346) #27	NEUROD6 (ENSTTRG00000000347) #28	ITPRID1 (ENSTTRG00000000349)	PPP1R17 (ENSTTRG00000000352) #31	PDE1C (ENSTTRG00000000353) #32
Sperm whale	MODERN SPECIES	16	JAZF1 (ENSPCTG00005006349) #8	CREB5 (ENSPCTG00005006108) #9	TRIL (ENSPCTG00005006053) #10	CPVL (ENSPCTG00005005992) #11	CHN2 (ENSPCTG00005005501) #12	PRR15 (ENSPCTG00005005430) #13	WIPF3 (ENSPCTG00005005378) #14	SCRN1 (ENSPCTG00005005255) #15	FKBP14 (ENSPCTG00005005226) #16	PLEKHA8 (ENSPCTG00005005155) #17	MTURN (ENSPCTG00005005111) #18	ENSPCTG00005005086	ZNRF2 (ENSPCTG00005005053) #19	NOD1 (ENSPCTG00005005030) #20	GGCT (ENSPCTG00005004993) #21	GARS (ENSPCTG00005004897) #22	CRHR2 (ENSPCTG00005004554) #23	ENSPCTG00005004414	ENSPCTG00005004377	MINDY4 (ENSPCTG00005004360) #24	AQP1 (ENSPCTG00005004332) #25	GHRHR (ENSPCTG00005004301) #26	ADCYAP1R1 (ENSPCTG00005004044) #27	ENSPCTG00005004012	NEUROD6 (ENSPCTG00005004003) #28	PPP1R17 (ENSPCTG00005003958) #31	PDE1C (ENSPCTG00005003896) #32	LSM5 (ENSPCTG00005003862) #34	AVL9 (ENSPCTG00005003825) #35	ENSPCTG00005003808	KBTBD2 (ENSPCTG00005003797) #36
Blue whale	MODERN SPECIES	20	JAZF1 (ENSBMSG00010013161) #8	CREB5 (ENSBMSG00010013101) #9	TRIL (ENSBMSG00010013079) #10	CPVL (ENSBMSG00010013056) #11	CHN2 (ENSBMSG00010012867) #12	PRR15 (ENSBMSG00010012818) #13	WIPF3 (ENSBMSG00010012793) #14	SCRN1 (ENSBMSG00010012766) #15	FKBP14 (ENSBMSG00010012757) #16	ENSBMSG00010012747 #17	PLEKHA8 (ENSBMSG00010012573) #17	MTURN (ENSBMSG00010012531) #18	ENSBMSG00010012512 #19	NOD1 (ENSBMSG00010012489) #20	GGCT (ENSBMSG00010012463) #21	GARS1 (ENSBMSG00010012439) #22	CRHR2 (ENSBMSG00010012297) #23	INMT (ENSBMSG00010012250)	ENSBMSG00010012235	MINDY4 (ENSBMSG00010012223) #24	AQP1 (ENSBMSG00010012207) #25	GHRHR (ENSBMSG00010012177) #26	ADCYAP1R1 (ENSBMSG00010011887) #27	NEUROD6 (ENSBMSG00010011827) #28	PPP1R17 (ENSBMSG00010011802) #31	PDE1C (ENSBMSG00010011636) #32	LSM5 (ENSBMSG00010011600) #34	AVL9 (ENSBMSG00010011590) #35	ENSBMSG00010011583	KBTBD2 (ENSBMSG00010011568) #36	ENSBMSG00010011554
Pecora	ANCESTRAL SPECIES	11	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00940000157125
Yarkand deer	MODERN SPECIES	9	TAX1BP1 (ENSCHYG00000007239) #7	JAZF1 (ENSCHYG00000007125) #8	CREB5 (ENSCHYG00000006881) #9	TRIL (ENSCHYG00000006856) #10	CPVL (ENSCHYG00000006755) #11	CHN2 (ENSCHYG00000006232) #12	WIPF3 (ENSCHYG00000006126) #14	SCRN1 (ENSCHYG00000006060) #15	FKBP14 (ENSCHYG00000006015) #16	ENSCHYG00000006007	PLEKHA8 (ENSCHYG00000005823) #17	ENSCHYG00000005766 #18	ENSCHYG00000005709 #19	NOD1 (ENSCHYG00000005557) #20	GGCT (ENSCHYG00000005514) #21	GARS1 (ENSCHYG00000005340) #22	CRHR2 (ENSCHYG00000004986) #23	INMT (ENSCHYG00000004935)	MINDY4 (ENSCHYG00000004906) #24	AQP1 (ENSCHYG00000004892) #25	GHRHR (ENSCHYG00000004865) #26	ADCYAP1R1 (ENSCHYG00000023246) #27	NEUROD6 (ENSCHYG00000023217) #28	ITPRID1 (ENSCHYG00000023054)	PPP1R17 (ENSCHYG00000022985) #31	ENSCHYG00000022952	PDE1C (ENSCHYG00000022279) #32	ENSCHYG00000022196	LSM5 (ENSCHYG00000022177) #34	AVL9 (ENSCHYG00000021778) #35	KBTBD2 (ENSCHYG00000021729) #36
Percora_a	ANCESTRAL SPECIES	11	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00940000157125
Bovidae	ANCESTRAL SPECIES	12	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc.b #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00940000157125
Bovinae	ANCESTRAL SPECIES	8	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc.b #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00940000157125
Bos	ANCESTRAL SPECIES	8	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00970000197801	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc.b #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00940000157125
Bos_a	ANCESTRAL SPECIES	12	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00970000197801	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc.b #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00960000186990	ENSGT00940000157125
Domestic yak	MODERN SPECIES	23	JAZF1 (ENSBGRG00000002602) #8	CREB5 (ENSBGRG00000002665) #9	ENSBGRG00000002725	CPVL (ENSBGRG00000002765) #11	CHN2 (ENSBGRG00000002806) #12	ENSBGRG00000002866 #13	WIPF3 (ENSBGRG00000002882) #14	SCRN1 (ENSBGRG00000002924) #15	FKBP14 (ENSBGRG00000002988) #16	PLEKHA8 (ENSBGRG00000003061) #17	ENSBGRG00000003339	ENSBGRG00000003342	ZNRF2 (ENSBGRG00000003362) #19	NOD1 (ENSBGRG00000003405) #20	GGCT (ENSBGRG00000003471) #21	GARS1 (ENSBGRG00000003504) #22	CRHR2 (ENSBGRG00000003550) #23	ENSBGRG00000003646	MINDY4 (ENSBGRG00000003692) #24	AQP1 (ENSBGRG00000003951) #25	GHRHR (ENSBGRG00000004049) #26	ADCYAP1R1 (ENSBGRG00000004275) #27	NEUROD6 (ENSBGRG00000004504) #28	ITPRID1 (ENSBGRG00000004516)	PPP1R17 (ENSBGRG00000004567) #31	PDE1C (ENSBGRG00000004660) #32	ENSBGRG00000005013 #34	AVL9 (ENSBGRG00000005054) #35	KBTBD2 (ENSBGRG00000005174) #36	FKBP9 (ENSBGRG00000005217)	ENSBGRG00000005279
Wild yak	MODERN SPECIES	206																GARS1 (ENSBMUG00000010500) #22	CRHR2 (ENSBMUG00000010308) #23	INMT (ENSBMUG00000010193)	MINDY4 (ENSBMUG00000010183) #24	AQP1 (ENSBMUG00000010159) #25	GHRHR (ENSBMUG00000010139) #26	ADCYAP1R1 (ENSBMUG00000010096) #27
Bos_b	ANCESTRAL SPECIES	7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00970000197801	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc.b #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b.v
Hybrid Bos Indicus	MODERN SPECIES	23	ENSBIXG00005014543	CPVL (ENSBIXG00005002017) #11	CHN2 (ENSBIXG00005014470) #12	ENSBIXG00005014373	PRR15 (ENSBIXG00005014364) #13	WIPF3 (ENSBIXG00005005634) #14	SCRN1 (ENSBIXG00005006217) #15	ENSBIXG00005014148	FKBP14 (ENSBIXG00005014140) #16	PLEKHA8 (ENSBIXG00005001831) #17	ENSBIXG00005014010	ENSBIXG00005014000 #18	ENSBIXG00005013961 #19	NOD1 (ENSBIXG00005013922) #20	GGCT (ENSBIXG00005013875) #21	GARS1 (ENSBIXG00005001725) #22	CRHR2 (ENSBIXG00005013749) #23	ENSBIXG00005013636	MINDY4 (ENSBIXG00005013614) #24	AQP1 (ENSBIXG00005007116) #25	GHRHR (ENSBIXG00005013504) #26	ADCYAP1R1 (ENSBIXG00005013430) #27	NEUROD6 (ENSBIXG00005001573) #28	ITPRID1 (ENSBIXG00005001569)	PPP1R17 (ENSBIXG00005006801) #31	PDE1C (ENSBIXG00005013226) #32	ENSBIXG00005013042 #34	AVL9 (ENSBIXG00005012977) #35	KBTBD2 (ENSBIXG00005012911) #36	FKBP9 (ENSBIXG00005012844)	NT5C3A (ENSBIXG00005012794)
Cow	MODERN SPECIES	23	JAZF1 (ENSBTAG00000019024) #8	CREB5 (ENSBTAG00000018909) #9	TRIL (ENSBTAG00000024340) #10	CPVL (ENSBTAG00000007146) #11	ENSBTAG00000054573	CHN2 (ENSBTAG00000020931) #12	PRR15 (ENSBTAG00000045567) #13	WIPF3 (ENSBTAG00000016220) #14	SCRN1 (ENSBTAG00000016223) #15	FKBP14 (ENSBTAG00000007870) #16	PLEKHA8 (ENSBTAG00000000521) #17	MTURN (ENSBTAG00000052317) #18	ZNRF2 (ENSBTAG00000000260) #19	NOD1 (ENSBTAG00000038235) #20	GGCT (ENSBTAG00000010597) #21	GARS1 (ENSBTAG00000018972) #22	CRHR2 (ENSBTAG00000014381) #23	INMT (ENSBTAG00000001448)	MINDY4 (ENSBTAG00000009390) #24	AQP1 (ENSBTAG00000000745) #25	GHRHR (ENSBTAG00000047599) #26	ADCYAP1R1 (ENSBTAG00000020247) #27	NEUROD6 (ENSBTAG00000000558) #28	ITPRID1 (ENSBTAG00000009254)	PPP1R17 (ENSBTAG00000001976) #31	PDE1C (ENSBTAG00000002739) #32	LSM5 (ENSBTAG00000002332) #34	AVL9 (ENSBTAG00000003114) #35	KBTBD2 (ENSBTAG00000003115) #36	FKBP9 (ENSBTAG00000016707)	NT5C3A (ENSBTAG00000016709)
American bison	MODERN SPECIES	2507						ENSBBBG00000008772 #12	PRR15 (ENSBBBG00000017494) #13	WIPF3 (ENSBBBG00000004339) #14	SCRN1 (ENSBBBG00000017560) #15	FKBP14 (ENSBBBG00000017570) #16	PLEKHA8 (ENSBBBG00000017672) #17	MTURN (ENSBBBG00000017692) #18	ENSBBBG00000017697 #19	NOD1 (ENSBBBG00000017717) #20	GGCT (ENSBBBG00000006781) #21	GARS1 (ENSBBBG00000017762) #22	CRHR2 (ENSBBBG00000017807) #23	INMT (ENSBBBG00000017831)	MINDY4 (ENSBBBG00000004395) #24	AQP1 (ENSBBBG00000017874) #25	GHRHR (ENSBBBG00000017884) #26	ADCYAP1R1 (ENSBBBG00000018054) #27	NEUROD6 (ENSBBBG00000018075) #28	ITPRID1 (ENSBBBG00000004451)	PPP1R17 (ENSBBBG00000018125) #31	PDE1C (ENSBBBG00000004483) #32	LSM5 (ENSBBBG00000018378) #34	ENSBBBG00000018384	AVL9 (ENSBBBG00000004513) #35	KBTBD2 (ENSBBBG00000018442) #36	FKBP9 (ENSBBBG00000018453)
Caprinae	ANCESTRAL SPECIES	10	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b.f	ENSGT00390000011708.a.k.a.b.e	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc.b.h #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125
Goat	MODERN SPECIES	23	JAZF1 (ENSCHIG00000000484) #8	CREB5 (ENSCHIG00000017696) #9	TRIL (ENSCHIG00000009595) #10	CPVL (ENSCHIG00000015778) #11	CHN2 (ENSCHIG00000022390) #12	PRR15 (ENSCHIG00000010520) #13	WIPF3 (ENSCHIG00000017026) #14	SCRN1 (ENSCHIG00000023295) #15	FKBP14 (ENSCHIG00000014006) #16	PLEKHA8 (ENSCHIG00000022799) #17	MTURN (ENSCHIG00000012150) #18	ENSCHIG00000020136	ZNRF2 (ENSCHIG00000009300) #19	NOD1 (ENSCHIG00000019284) #20	GGCT (ENSCHIG00000026902) #21	GARS1 (ENSCHIG00000016912) #22	CRHR2 (ENSCHIG00000025594) #23	ENSCHIG00000012777	ENSCHIG00000021246	MINDY4 (ENSCHIG00000014828) #24	AQP1 (ENSCHIG00000026624) #25	GHRHR (ENSCHIG00000016817) #26	ADCYAP1R1 (ENSCHIG00000006461) #27	NEUROD6 (ENSCHIG00000010993) #28	ITPRID1 (ENSCHIG00000022663)	PPP1R17 (ENSCHIG00000011679) #31	PDE1C (ENSCHIG00000017746) #32	LSM5 (ENSCHIG00000024539) #34	AVL9 (ENSCHIG00000015406) #35	KBTBD2 (ENSCHIG00000024220) #36	FKBP9 (ENSCHIG00000013518)
Rambouillet Sheep	MODERN SPECIES	20	CREB5 (ENSOARG00020013276) #9	TRIL (ENSOARG00020013245) #10	CPVL (ENSOARG00020013107) #11	CHN2 (ENSOARG00020012268) #12	ENSOARG00020012214	PRR15 (ENSOARG00020012169) #13	WIPF3 (ENSOARG00020012033) #14	SCRN1 (ENSOARG00020011928) #15	FKBP14 (ENSOARG00020011890) #16	ENSOARG00020011867	PLEKHA8 (ENSOARG00020011769) #17	MTURN (ENSOARG00020011720) #18	ZNRF2 (ENSOARG00020011617) #19	NOD1 (ENSOARG00020011349) #20	GGCT (ENSOARG00020011238) #21	GARS1 (ENSOARG00020011037) #22	CRHR2 (ENSOARG00020010593) #23	ENSOARG00020010343	ENSOARG00020010282	MINDY4 (ENSOARG00020009802) #24	AQP1 (ENSOARG00020009743) #25	GHRHR (ENSOARG00020009688) #26	ADCYAP1R1 (ENSOARG00020008168) #27	NEUROD6 (ENSOARG00020008099) #28	PPP1R17 (ENSOARG00020007777) #31	PDE1C (ENSOARG00020007058) #32	LSM5 (ENSOARG00020006950) #34	AVL9 (ENSOARG00020006815) #35	KBTBD2 (ENSOARG00020006763) #36	FKBP9 (ENSOARG00020006583)	NT5C3A (ENSOARG00020006364)
Siberian musk deer	MODERN SPECIES	87	ENSMMSG00000009066	CREB5 (ENSMMSG00000009091) #9	TRIL (ENSMMSG00000009241) #10	CPVL (ENSMMSG00000009268) #11	CHN2 (ENSMMSG00000009425) #12	PRR15 (ENSMMSG00000010370) #13	WIPF3 (ENSMMSG00000010392) #14	SCRN1 (ENSMMSG00000010472) #15	FKBP14 (ENSMMSG00000010546) #16	PLEKHA8 (ENSMMSG00000010578) #17	MTURN (ENSMMSG00000010670) #18	ZNRF2 (ENSMMSG00000010692) #19	NOD1 (ENSMMSG00000010746) #20	GGCT (ENSMMSG00000010811) #21	ENSMMSG00000010861	GARS1 (ENSMMSG00000010996) #22	CRHR2 (ENSMMSG00000011057) #23	ENSMMSG00000011350	MINDY4 (ENSMMSG00000011375) #24	AQP1 (ENSMMSG00000011496) #25	GHRHR (ENSMMSG00000011527) #26	ADCYAP1R1 (ENSMMSG00000011609) #27	NEUROD6 (ENSMMSG00000012842) #28	ITPRID1 (ENSMMSG00000012854)	PPP1R17 (ENSMMSG00000012998) #31	PDE1C (ENSMMSG00000013039) #32	LSM5 (ENSMMSG00000013162) #34	AVL9 (ENSMMSG00000013195) #35	KBTBD2 (ENSMMSG00000013277) #36	FKBP9 (ENSMMSG00000013301)	NT5C3A (ENSMMSG00000013357)
Camelidae	ANCESTRAL SPECIES	2	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a.b	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455.dc #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00500000045246	ENSGT00940000162490.r
Alpaca	MODERN SPECIES	3413																GARS1 (ENSVPAG00000009438) #22
Arabian camel	MODERN SPECIES	33	HIBADH (ENSCDRG00005001193)	TAX1BP1 (ENSCDRG00005001239) #7	JAZF1 (ENSCDRG00005001369) #8	CREB5 (ENSCDRG00005001440) #9	TRIL (ENSCDRG00005001580) #10	CPVL (ENSCDRG00005001591) #11	CHN2 (ENSCDRG00005001695) #12	PRR15 (ENSCDRG00005002120) #13	SCRN1 (ENSCDRG00005002180) #15	FKBP14 (ENSCDRG00005002197) #16	PLEKHA8 (ENSCDRG00005002216) #17	MTURN (ENSCDRG00005002260) #18	ZNRF2 (ENSCDRG00005002276) #19	NOD1 (ENSCDRG00005002317) #20	GGCT (ENSCDRG00005002345) #21	GARS1 (ENSCDRG00005002379) #22	CRHR2 (ENSCDRG00005002457) #23	ENSCDRG00005002680	ENSCDRG00005002702	ENSCDRG00005002727	MINDY4 (ENSCDRG00005002757) #24	AQP1 (ENSCDRG00005002776) #25	GHRHR (ENSCDRG00005002788) #26	ADCYAP1R1 (ENSCDRG00005002835) #27	NEUROD6 (ENSCDRG00005002913) #28	ITPRID1 (ENSCDRG00005002931)	PPP1R17 (ENSCDRG00005002984) #31	PDE1C (ENSCDRG00005003038) #32	LSM5 (ENSCDRG00005003138) #34	AVL9 (ENSCDRG00005003163) #35	KBTBD2 (ENSCDRG00005003181) #36
Atlantogenata	ANCESTRAL SPECIES	7	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00500000045044 #18	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000009586	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125
Xenarthra	ANCESTRAL SPECIES	585														ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26
Armadillo	MODERN SPECIES	997														NOD1 (ENSDNOG00000016621) #20	GGCT (ENSDNOG00000007242) #21	GARS1 (ENSDNOG00000046478) #22	CRHR2 (ENSDNOG00000024411) #23	INMT (ENSDNOG00000005216)	ENSDNOG00000005222 #24	AQP1 (ENSDNOG00000038954) #25	GHRHR (ENSDNOG00000010557) #26
Sloth	MODERN SPECIES	736																GARS1 (ENSCHOG00000003253) #22
Afrotheria	ANCESTRAL SPECIES	5	ENSGT00940000155255	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Afrotheria_a	ANCESTRAL SPECIES	5	ENSGT00940000155255	ENSGT00950000183025.b.a #7	ENSGT00390000003635 #8	ENSGT00940000156420 #9	ENSGT00940000161975 #10	ENSGT00940000159498 #11	ENSGT01030000234635.a.b.a.a #12	ENSGT00940000154534.b.b #13	ENSGT00940000160267 #14	ENSGT00390000013474.b.b #15	ENSGT00940000157858 #16	ENSGT00940000157288 #17	ENSGT00940000159017.a.a #19	ENSGT00940000157845 #20	ENSGT00500000044921.b #21	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00390000011708.a.k.a	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000159827 #28	ENSGT00940000161762	ENSGT00390000005586 #31	ENSGT00940000155331.A #32	ENSGT00390000001455 #34	ENSGT00390000010255 #35	ENSGT00940000156069 #36	ENSGT00940000157125	ENSGT00390000012959.b
Elephant	MODERN SPECIES	428	TAX1BP1 (ENSLAFG00000006940) #7	JAZF1 (ENSLAFG00000006942) #8	ENSLAFG00000027732	CREB5 (ENSLAFG00000029453) #9	TRIL (ENSLAFG00000029935) #10	CPVL (ENSLAFG00000002811) #11	CHN2 (ENSLAFG00000002595) #12	PRR15 (ENSLAFG00000002598) #13	ENSLAFG00000030264 #14	SCRN1 (ENSLAFG00000017504) #15	FKBP14 (ENSLAFG00000007038) #16	PLEKHA8 (ENSLAFG00000007041) #17	ZNRF2 (ENSLAFG00000023370) #19	NOD1 (ENSLAFG00000011290) #20	GGCT (ENSLAFG00000031681) #21	GARS1 (ENSLAFG00000002496) #22	CRHR2 (ENSLAFG00000002500) #23	INMT (ENSLAFG00000005251)	AQP1 (ENSLAFG00000010172) #25	GHRHR (ENSLAFG00000016825) #26	ADCYAP1R1 (ENSLAFG00000016428) #27	NEUROD6 (ENSLAFG00000018034) #28	ITPRID1 (ENSLAFG00000020582)	PPP1R17 (ENSLAFG00000008501) #31	PDE1C (ENSLAFG00000008517) #32	LSM5 (ENSLAFG00000029579) #34	AVL9 (ENSLAFG00000010531) #35	KBTBD2 (ENSLAFG00000031816) #36	FKBP9 (ENSLAFG00000022111)	NT5C3A (ENSLAFG00000005259)	ENSLAFG00000006429
Hyrax	MODERN SPECIES	674																GARS1 (ENSPCAG00000007199) #22	CRHR2 (ENSPCAG00000007310) #23
Tenrec	MODERN SPECIES	931																GARS1 (ENSETEG00000012196) #22
Marsupialia	ANCESTRAL SPECIES	14	ENSGT00940000154014.a	ENSGT01030000234518.E.c.b	ENSGT01030000234518.E.c.a	ENSGT00940000155994	ENSGT00390000008427	ENSGT00390000008749.e	ENSGT00390000004417.a	ENSGT00390000009677	ENSGT00940000154222.d.b	ENSGT00390000017671.a	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00550000074921	ENSGT00390000004860	ENSGT00940000157238	ENSGT00940000160986	ENSGT00940000157444	ENSGT00940000159941	ENSGT00390000011897	ENSGT00390000010053	ENSGT00950000182952.D
Marsupialia_b	ANCESTRAL SPECIES	14	ENSGT00940000154014.a	ENSGT01030000234518.E.c.b	ENSGT01030000234518.E.c.a	ENSGT00940000155994	ENSGT00390000008427	ENSGT00390000008749.e	ENSGT00390000004417.a	ENSGT00390000009677	ENSGT00940000154222.d.b	ENSGT00390000017671.a	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00550000074921	ENSGT00390000004860	ENSGT00940000157238	ENSGT00940000160986	ENSGT00940000157444	ENSGT00940000159941	ENSGT00390000011897	ENSGT00390000010053	ENSGT00950000182952.D	ENSGT00940000153370.b
Diprotodontia	ANCESTRAL SPECIES	61	ENSGT00940000154014.a	ENSGT01030000234518.E.c.b	ENSGT01030000234518.E.c.a	ENSGT00940000155994	ENSGT00390000008427	ENSGT00390000008749.e	ENSGT00390000004417.a	ENSGT00390000009677	ENSGT00940000154222.d.b	ENSGT00390000017671.a	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858.e #26	ENSGT00940000157362 #27	ENSGT00550000074921	ENSGT00390000004860	ENSGT00940000157238	ENSGT00940000160986	ENSGT00940000157444	ENSGT00940000159941	ENSGT00390000011897	ENSGT00390000010053	ENSGT00950000182952.D	ENSGT00940000153370.b
Diprotodontia_a	ANCESTRAL SPECIES	10	ENSGT00940000154014.a	ENSGT01030000234518.E.c.b	ENSGT01030000234518.E.c.a	ENSGT00940000155994.tb	ENSGT00390000008427	ENSGT00390000008749.e	ENSGT00390000004417.a	ENSGT00390000009677	ENSGT00940000154222.d.b	ENSGT00390000017671.a	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858.e #26	ENSGT00940000157362 #27	ENSGT00550000074921	ENSGT00390000004860	ENSGT00940000157238	ENSGT00940000160986	ENSGT00940000157444	ENSGT00940000159941	ENSGT00390000011897	ENSGT00390000010053	ENSGT00950000182952.D	ENSGT00940000153370.b
Common wonbat	MODERN SPECIES	1053	GPR141 (ENSVURG00010013484)	ELMO1 (ENSVURG00010013600)	AOAH (ENSVURG00010016348)	ANLN (ENSVURG00010016396)	ENSVURG00010016459	ENSVURG00010016467	EEPD1 (ENSVURG00010016475)	ENSVURG00010016485	ENSVURG00010016501	HERPUD2 (ENSVURG00010016508)	ACAA1 (ENSVURG00010016529)	DLEC1 (ENSVURG00010016553)	PLCD1 (ENSVURG00010016702)	VILL (ENSVURG00010016741)	ENSVURG00010016760	GARS1 (ENSVURG00010016771) #22	CRHR2 (ENSVURG00010016791) #23	MINDY4 (ENSVURG00010016848) #24	AQP1 (ENSVURG00010016883) #25	GHRHR (ENSVURG00010016899) #26	ADCYAP1R1 (ENSVURG00010017084) #27	IARS1 (ENSVURG00010018053)	ENSVURG00010018075	OGN (ENSVURG00010018080)	OMD (ENSVURG00010018083)	ASPN (ENSVURG00010018088)	ECM2 (ENSVURG00010018095)	ENSVURG00010018098	IPPK (ENSVURG00010018105)	ENSVURG00010018117	TRANK1 (ENSVURG00010018135)
koala	MODERN SPECIES	152	GPR141 (ENSPCIG00000015085)	ENSPCIG00000033160	ENSPCIG00000000677	AOAH (ENSPCIG00000025938)	ANLN (ENSPCIG00000025935)	MATCAP2 (ENSPCIG00000023542)	EEPD1 (ENSPCIG00000017032)	SEPTIN7 (ENSPCIG00000017026)	ENSPCIG00000017029	HERPUD2 (ENSPCIG00000009666)	ACAA1 (ENSPCIG00000005582)	DLEC1 (ENSPCIG00000021260)	PLCD1 (ENSPCIG00000008009)	VILL (ENSPCIG00000007205)	ENSPCIG00000017017	GARS1 (ENSPCIG00000017010) #22	CRHR2 (ENSPCIG00000016999) #23	MINDY4 (ENSPCIG00000030698) #24	ENSPCIG00000018056	AQP1 (ENSPCIG00000018057) #25	ENSPCIG00000018058 #26	ENSPCIG00000018059 #26	ADCYAP1R1 (ENSPCIG00000023795) #27	IARS1 (ENSPCIG00000023807)	ENSPCIG00000010446	ENSPCIG00000037128	OGN (ENSPCIG00000010440)	OMD (ENSPCIG00000010438)	ASPN (ENSPCIG00000010436)	ECM2 (ENSPCIG00000010433)	IPPK (ENSPCIG00000010429)
Wallaby	MODERN SPECIES	1558																GARS1 (ENSMEUG00000001741) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000031695	ENSSHAG00000001536	ENSSHAG00000022454	AOAH (ENSSHAG00000022160)	MATCAP2 (ENSSHAG00000003634)	ENSSHAG00000025832	ENSSHAG00000003788	ENSSHAG00000006029	ENSSHAG00000030865	ENSSHAG00000027246	ENSSHAG00000006345	ENSSHAG00000006856	PLCD1 (ENSSHAG00000007835)	ENSSHAG00000031894	ENSSHAG00000029835	ENSSHAG00000003419 #22	CRHR2 (ENSSHAG00000000076) #23	MINDY4 (ENSSHAG00000000069) #24	AQP1 (ENSSHAG00000030108) #25	ENSSHAG00000028233	ENSSHAG00000032123 #27	ENSSHAG00000000237	ENSSHAG00000028866	ENSSHAG00000029866	OGN (ENSSHAG00000020525)	OMD (ENSSHAG00000026198)	ASPN (ENSSHAG00000000510)	ENSSHAG00000000081	ENSSHAG00000031896	ENSSHAG00000024444	ENSSHAG00000030691
Opossum	MODERN SPECIES	5	KBTBD2 (ENSMODG00000021551) #36	AVL9 (ENSMODG00000021550) #35	ENSMODG00000002605	CLASP2 (ENSMODG00000002548)	ENSMODG00000002472	ENSMODG00000038986	ARPP21 (ENSMODG00000002309)	ENSMODG00000002226	ENSMODG00000027724	ENSMODG00000021171	ANLN (ENSMODG00000021170)	MATCAP2 (ENSMODG00000021169)	ENSMODG00000021167	HERPUD2 (ENSMODG00000021166)	ACAA1 (ENSMODG00000021165)	ENSMODG00000021163 #22	ENSMODG00000021162 #23	TTC21A (ENSMODG00000013468)	GORASP1 (ENSMODG00000013443)	WDR48 (ENSMODG00000013437)	SCN11A (ENSMODG00000013414)	SCN10A (ENSMODG00000013404)	ENSMODG00000046399	SCN5A (ENSMODG00000013384)	ENSMODG00000047681	ENSMODG00000049864	ENSMODG00000013356	MLH1 (ENSMODG00000013353)	ENSMODG00000013326	GOLGA4 (ENSMODG00000013315)	ITGA9 (ENSMODG00000013303)
Platypus	MODERN SPECIES	4	ENSOANG00000009845	TTC21A (ENSOANG00000009846)	ENSOANG00000009848	ENSOANG00000048090	ENSOANG00000043093	ENSOANG00000039467	ENSOANG00000000383	ENSOANG00000000384	MYD88 (ENSOANG00000001175)	ENSOANG00000006423	ACAA1 (ENSOANG00000043694)	ENSOANG00000010795	PLCD1 (ENSOANG00000005661)	VILL (ENSOANG00000011776)	CTDSPL (ENSOANG00000015802)	GARS1 (ENSOANG00000006262) #22	CRHR2 (ENSOANG00000008095) #23	INMT (ENSOANG00000047781)	ADCYAP1R1 (ENSOANG00000006558) #27	ENSOANG00000043586 #26	AQP1 (ENSOANG00000036888) #25	ENSOANG00000020679	SEC22C (ENSOANG00000036395)	ENSOANG00000040878	ENSOANG00000048058	ENSOANG00000008946	ZBTB47 (ENSOANG00000010793)	KLHL40 (ENSOANG00000037937)	HHATL (ENSOANG00000004353)	HIGD1A (ENSOANG00000038143)	ENSOANG00000050342
Sauria	ANCESTRAL SPECIES	15	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a.b	ENSGT00940000154607.b.a.a	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000161688	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596
Lepidosauria	ANCESTRAL SPECIES	5	ENSGT00390000008686.c	ENSGT00390000005979.a	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a.b	ENSGT00940000154607.b.a.a	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000161688	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596
Episquamata	ANCESTRAL SPECIES	5	ENSGT00390000008686.c	ENSGT00390000005979.a	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a.b	ENSGT00940000154607.b.a.a	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000161688	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596
Laterata	ANCESTRAL SPECIES	10	ENSGT00390000008686.c	ENSGT00390000005979.a	ENSGT00950000183072.a	ENSGT00950000183580	ENSGT00940000154607.b.a.b	ENSGT00940000154607.b.a.a	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596	ENSGT00940000154276	ENSGT00940000153709.B.j
Common wall lizard	MODERN SPECIES	3	ENSPMRG00000011500	GORASP1 (ENSPMRG00000011490)	TTC21A (ENSPMRG00000010937)	CSRNP1 (ENSPMRG00000010815)	ENSPMRG00000010795	SLC22A13 (ENSPMRG00000010786)	ENSPMRG00000010767	MYD88 (ENSPMRG00000010760)	ENSPMRG00000010752	ENSPMRG00000010738	ACAA1 (ENSPMRG00000010729)	ENSPMRG00000010721	PLCD1 (ENSPMRG00000010710)	VILL (ENSPMRG00000010654)	CTDSPL (ENSPMRG00000010623)	GARS1 (ENSPMRG00000010601) #22	ENSPMRG00000010590	CRHR2 (ENSPMRG00000010236) #23	ENSPMRG00000010176 #24	AQP1 (ENSPMRG00000010167) #25	GHRHR (ENSPMRG00000010157) #26	ADCYAP1R1 (ENSPMRG00000010148) #27	ENSPMRG00000010142	ENSPMRG00000017897	VIPR1 (ENSPMRG00000017889)	SEC22C (ENSPMRG00000017882)	NKTR (ENSPMRG00000017873)	ENSPMRG00000017866	ENSPMRG00000017859	KLHL40 (ENSPMRG00000017856)	HHATL (ENSPMRG00000017849)
Argentine black and white tegu	MODERN SPECIES	5	TTC21A (ENSSMRG00000015093)	CSRNP1 (ENSSMRG00000015094)	ENSSMRG00000015097	ENSSMRG00000015098	ENSSMRG00000015245	ENSSMRG00000015250	MYD88 (ENSSMRG00000015253)	ENSSMRG00000015254	ENSSMRG00000015256	ACAA1 (ENSSMRG00000015260)	DLEC1 (ENSSMRG00000015262)	ENSSMRG00000015267	PLCD1 (ENSSMRG00000015269)	VILL (ENSSMRG00000015276)	CTDSPL (ENSSMRG00000016657)	GARS1 (ENSSMRG00000016662) #22	ENSSMRG00000016789 #23	ENSSMRG00000016792	TSPAN13 (ENSSMRG00000016796)	MINDY4 (ENSSMRG00000016800) #24	AQP1 (ENSSMRG00000016805) #25	GHRHR (ENSSMRG00000016806) #26	ENSSMRG00000016814	ADCYAP1R1 (ENSSMRG00000016818) #27	ENSSMRG00000016822	VIPR1 (ENSSMRG00000016842)	SEC22C (ENSSMRG00000016845)	ENSSMRG00000016849	ENSSMRG00000016851	ZBTB47 (ENSSMRG00000016854)	KLHL40 (ENSSMRG00000016855)
Toxicofera	ANCESTRAL SPECIES	4	ENSGT00390000005979.a	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a.b	ENSGT00940000154607.b.a.a	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000161688.h.b	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	24	ENSGT00390000008686.c	ENSGT00390000005979.a	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a.b	ENSGT00940000154607.b.a.a	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a.a #22	ENSGT00940000161688.h.b	ENSGT00940000156795 #23	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596	ENSGT00940000153709.B.j	ENSGT00940000153709.B.i
Indian cobra	MODERN SPECIES	337	GORASP1 (ENSNNAG00000012571)	TTC21A (ENSNNAG00000011695)	CSRNP1 (ENSNNAG00000011579)	ENSNNAG00000011552	ENSNNAG00000011349	ENSNNAG00000011306	ENSNNAG00000011246	MYD88 (ENSNNAG00000011071)	ENSNNAG00000011056	ENSNNAG00000011037	ACAA1 (ENSNNAG00000011019)	ENSNNAG00000010996	DLEC1 (ENSNNAG00000010698)	VILL (ENSNNAG00000010300)	CTDSPL (ENSNNAG00000010153)	ENSNNAG00000010092 #22	ENSNNAG00000010072	ENSNNAG00000010038 #23	ENSNNAG00000010020 #23	ENSNNAG00000010002	ADCYAP1R1 (ENSNNAG00000009822) #27	ENSNNAG00000009782	NKTR (ENSNNAG00000009715)	ZBTB47 (ENSNNAG00000009670)	KLHL40 (ENSNNAG00000009511)	CCDC13 (ENSNNAG00000009418)	ENSNNAG00000009402	ENSNNAG00000009388	ENSNNAG00000009366	ENSNNAG00000009323	ENSNNAG00000009296
Elapidae_a	ANCESTRAL SPECIES	92	ENSGT00390000005979.a	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a.b	ENSGT00940000154607.b.a.a	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a.a #22	ENSGT00940000156795 #23
Acanthophiinae	ANCESTRAL SPECIES	86	ENSGT00390000005979.a	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a.b	ENSGT00940000154607.b.a.a	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a.a #22	ENSGT00940000156795 #23
Mainland tiger snake	MODERN SPECIES	460																ENSNSUG00000015071 #22	CRHR2 (ENSNSUG00000015072) #23
Eastern brown snake	MODERN SPECIES	108	ENSPTXG00000018884	GORASP1 (ENSPTXG00000018885)	TTC21A (ENSPTXG00000018887)	CSRNP1 (ENSPTXG00000018888)	ENSPTXG00000018889	ENSPTXG00000018891	ENSPTXG00000018901	OXSR1 (ENSPTXG00000018903)	MYD88 (ENSPTXG00000018905)	ENSPTXG00000018906	ACAA1 (ENSPTXG00000018908)	DLEC1 (ENSPTXG00000018911)	PLCD1 (ENSPTXG00000018915)	VILL (ENSPTXG00000018918)	CTDSPL (ENSPTXG00000018920)	ENSPTXG00000018922 #22	CRHR2 (ENSPTXG00000018923) #23
Blue-lipped sea krait	MODERN SPECIES	10297															ENSLLTG00000008958	ENSLLTG00000009000 #22
Elapidae	ANCESTRAL SPECIES	54	ENSGT00940000157096	ENSGT00390000013904	ENSGT00940000164140	ENSGT00390000004940.a.a	ENSGT00390000012141.a	ENSGT00940000156921	ENSGT00940000153386.B	ENSGT00940000154648.a.a	ENSGT00950000183106.a.a.b	ENSGT00940000155439	ENSGT00940000164682	ENSGT00390000006294	ENSGT00390000018195	ENSGT00940000165367	ENSGT00940000158024.C	ENSGT00940000153759.a.a.b #22	ENSGT00940000159865	ENSGT00950000182930.C.d.a	ENSGT00950000182930.C.d.b	ENSGT00950000182930.A.b.i.b.a.a.a
Elapidae_a	ANCESTRAL SPECIES	123	ENSGT00940000155604	ENSGT00940000171017	ENSGT00940000157096	ENSGT00390000013904	ENSGT00940000164140	ENSGT00390000004940.a.a	ENSGT00390000012141.a	ENSGT00940000156921	ENSGT00940000153386.B	ENSGT00940000154648.a.a	ENSGT00950000183106.a.a.b	ENSGT00940000155439	ENSGT00940000164682	ENSGT00390000018195	ENSGT00940000158024.C	ENSGT00940000153759.a.a.b #22	ENSGT00940000159865	ENSGT00950000182930.C.c	ENSGT00950000182930.A.b.i.b.a.a.a
Acanthophiinae	ANCESTRAL SPECIES	119	ENSGT00940000155604	ENSGT00940000171017	ENSGT00940000157096	ENSGT00390000013904	ENSGT00940000164140	ENSGT00390000004940.a.a	ENSGT00390000012141.a	ENSGT00940000156921	ENSGT00940000153386.B	ENSGT00940000154648.a.a	ENSGT00950000183106.a.a.b	ENSGT00940000155439	ENSGT00940000164682	ENSGT00390000018195	ENSGT00940000158024.C	ENSGT00940000153759.a.a.b #22	ENSGT00940000159865	ENSGT00950000182930.C.c	ENSGT00950000182930.A.b.i.b.a.a.a
Mainland tiger snake	MODERN SPECIES	234																ENSNSUG00000020351 #22	ENSNSUG00000020352	SENP5 (ENSNSUG00000020353)
Eastern brown snake	MODERN SPECIES	116								PSMD2 (ENSPTXG00000017970)	EIF4G1 (ENSPTXG00000011176)	FAM131A (ENSPTXG00000011122)	ENSPTXG00000011121	CLCN2 (ENSPTXG00000008109)	ENSPTXG00000008080	POLR2H (ENSPTXG00000008075)	EPHB3 (ENSPTXG00000008065)	ENSPTXG00000008063 #22	SENP5 (ENSPTXG00000015178)	ENSPTXG00000015173
Blue-lipped sea krait	MODERN SPECIES	1693																ENSLLTG00000012752 #22
Indian cobra	MODERN SPECIES	3	VWA5B2 (ENSNNAG00000018482)	ALG3 (ENSNNAG00000018470)	EEF1AKMT4 (ENSNNAG00000018467)	CAMK2N2 (ENSNNAG00000018465)	ENSNNAG00000018461	ECE2 (ENSNNAG00000018389)	PSMD2 (ENSNNAG00000018358)	EIF4G1 (ENSNNAG00000014164)	FAM131A (ENSNNAG00000013567)	CLCN2 (ENSNNAG00000012465)	ENSNNAG00000012255	ENSNNAG00000012225	POLR2H (ENSNNAG00000012187)	ENSNNAG00000012095	EPHB3 (ENSNNAG00000012024)	ENSNNAG00000011987 #22	ENSNNAG00000011956	ENSNNAG00000011931	ENSNNAG00000011913	ENSNNAG00000011905	ENSNNAG00000011795	ENSNNAG00000011764	ENSNNAG00000011748	ENSNNAG00000011721	ENSNNAG00000011707	ENSNNAG00000011677	ENSNNAG00000011657	ENSNNAG00000011641	KNG1 (ENSNNAG00000011576)	EIF4A2 (ENSNNAG00000011460)	RFC4 (ENSNNAG00000011428)
Lizard	MODERN SPECIES	5	ENSACAG00000009777	ENSACAG00000024540	OXSR1 (ENSACAG00000009859)	ENSACAG00000037475	MYD88 (ENSACAG00000009971)	ENSACAG00000028395	ENSACAG00000005120	ACAA1 (ENSACAG00000005137)	ENSACAG00000034923	DLEC1 (ENSACAG00000005201)	PLCD1 (ENSACAG00000005221)	VILL (ENSACAG00000005301)	CTDSPL (ENSACAG00000005539)	ENSACAG00000009156	ENSACAG00000005591	GARS1 (ENSACAG00000005601) #22	CRHR2 (ENSACAG00000005741) #23	ENSACAG00000042056	ENSACAG00000042715	MINDY4 (ENSACAG00000005775) #24	ENSACAG00000005808 #25	GHRHR (ENSACAG00000005849) #26	ENSACAG00000042375	ADCYAP1R1 (ENSACAG00000006137) #27	ENSACAG00000006375	VIPR1 (ENSACAG00000006506)	SEC22C (ENSACAG00000006664)	ENSACAG00000035754	ENSACAG00000006683	ZBTB47 (ENSACAG00000006705)	ENSACAG00000006735
tuatara	MODERN SPECIES	423													ENSSPUG00000001871	VILL (ENSSPUG00000001837)	CTDSPL (ENSSPUG00000001824)	ENSSPUG00000001815 #22	ENSSPUG00000001809	CRHR2 (ENSSPUG00000001768) #23	ESYT2 (ENSSPUG00000001744)	ENSSPUG00000001736 #16	ENSSPUG00000001725	ENSSPUG00000001713	MINDY4 (ENSSPUG00000001569) #24	AQP1 (ENSSPUG00000001522) #25	GHRHR (ENSSPUG00000001441) #26	ADCYAP1R1 (ENSSPUG00000001377) #27	ENSSPUG00000001315	VIPR1 (ENSSPUG00000001247)	SEC22C (ENSSPUG00000001233)	ENSSPUG00000001197	ENSSPUG00000001186
Archelosauria	ANCESTRAL SPECIES	6	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a	ENSGT00940000162134	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263521.a.a.a.a	ENSGT00940000161688	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b
Archosauria	ANCESTRAL SPECIES		ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263521.a.a.a.a	ENSGT00940000161688	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b
Aves	ANCESTRAL SPECIES	5	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a.c	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263521.a.a.a.a	ENSGT00960000189325	ENSGT00940000161688	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360
Neognathae	ANCESTRAL SPECIES		ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a.d	ENSGT00940000154607.b.a.a.c	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263521.a.a.a.a	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596
Galloanserae	ANCESTRAL SPECIES		ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a.d	ENSGT00940000154607.b.a.a.c	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263521.a.a.a.a	ENSGT00940000161688	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000180074	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b
Anatidae	ANCESTRAL SPECIES	1	ENSGT00390000008686.c	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a.c	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000161688	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596	ENSGT00940000154276
Pink-footed goose	MODERN SPECIES	35	ENSABRG00000020470	CSRNP1 (ENSABRG00000020471)	ENSABRG00000020473	ENSABRG00000020475	SLC22A13 (ENSABRG00000020486)	ENSABRG00000020497	MYD88 (ENSABRG00000020511)	ENSABRG00000020518	ENSABRG00000020527	ENSABRG00000020536	ACAA1 (ENSABRG00000020545)	DLEC1 (ENSABRG00000020559)	PLCD1 (ENSABRG00000020609)	VILL (ENSABRG00000020617)	CTDSPL (ENSABRG00000020621)	GARS1 (ENSABRG00000000299) #22	ENSABRG00000000641	CRHR2 (ENSABRG00000000646) #23	MINDY4 (ENSABRG00000000670) #24	AQP1 (ENSABRG00000000767) #25	GHRHR (ENSABRG00000000836) #26	ADCYAP1R1 (ENSABRG00000001449) #27	ENSABRG00000001544	VIPR1 (ENSABRG00000001593)	SEC22C (ENSABRG00000001638)	NKTR (ENSABRG00000001684)	ZBTB47 (ENSABRG00000001728)	KLHL40 (ENSABRG00000001748)	HHATL (ENSABRG00000001773)	CCDC13 (ENSABRG00000001846)	HIGD1A (ENSABRG00000001881)
Duck	MODERN SPECIES	10	ENSAPLG00000026377	WDR48 (ENSAPLG00000012688)	GORASP1 (ENSAPLG00000012693)	CSRNP1 (ENSAPLG00000001969)	ENSAPLG00000000980	ENSAPLG00000003878	MYD88 (ENSAPLG00000026818)	ENSAPLG00000005271	ENSAPLG00000005608	ACAA1 (ENSAPLG00000006202)	DLEC1 (ENSAPLG00000006960)	PLCD1 (ENSAPLG00000007299)	VILL (ENSAPLG00000008184)	CTDSPL (ENSAPLG00000030602)	ENSAPLG00000026043	GARS1 (ENSAPLG00000015638) #22	ENSAPLG00000027330	CRHR2 (ENSAPLG00000011160) #23	MINDY4 (ENSAPLG00000011415) #24	AQP1 (ENSAPLG00000011792) #25	GHRHR (ENSAPLG00000011541) #26	ADCYAP1R1 (ENSAPLG00000009120) #27	ENSAPLG00000010054	SEC22C (ENSAPLG00000012311)	ZBTB47 (ENSAPLG00000022037)	KLHL40 (ENSAPLG00000012893)	NKTR (ENSAPLG00000012358)	HHATL (ENSAPLG00000013163)	CCDC13 (ENSAPLG00000013331)	ACKR2 (ENSAPLG00000000705)	ENSAPLG00000019155
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a.d	ENSGT00940000154607.b.a.a.c	ENSGT00940000162134	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT01070000257288	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263521.a.a.a.a	ENSGT00940000156795 #23	ENSGT00940000154844.b.b.c	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410.ib	ENSGT00390000000410.jb	ENSGT00950000185398	ENSGT00940000157026	ENSGT00940000158533	ENSGT00940000160086	ENSGT00940000165573	ENSGT00390000018786
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a.d	ENSGT00940000154607.b.a.a.c	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT01070000257288	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263521.a.a.a.a	ENSGT00940000156795 #23	ENSGT00940000154844.b.b.c	ENSGT00940000158053	ENSGT00390000016168.a	ENSGT00940000161501	ENSGT01030000234607.A.a.b.a	ENSGT00390000000410.ib	ENSGT01100000264253	ENSGT00390000000410.jb	ENSGT00950000185398	ENSGT00940000157026	ENSGT00940000158533	ENSGT00940000160086	ENSGT00940000165573
Turkey	MODERN SPECIES	26	WDR48 (ENSMGAG00000003904)	GORASP1 (ENSMGAG00000003885)	CSRNP1 (ENSMGAG00000003865)	ENSMGAG00000020375	ENSMGAG00000003757	ENSMGAG00000003678	OXSR1 (ENSMGAG00000003580)	MYD88 (ENSMGAG00000003567)	ENSMGAG00000003515	ACAA1 (ENSMGAG00000003490)	DLEC1 (ENSMGAG00000003424)	PLCD1 (ENSMGAG00000003387)	VILL (ENSMGAG00000003270)	ENSMGAG00000020738	CTDSPL (ENSMGAG00000003228)	ENSMGAG00000003162 #22	ENSMGAG00000003149	ENSMGAG00000003120 #23	ENSMGAG00000019435	MYO1G (ENSMGAG00000003048)	CCM2 (ENSMGAG00000003024)	ENSMGAG00000020305	TBRG4 (ENSMGAG00000002993)	ENSMGAG00000002989	ENSMGAG00000002975	ENSMGAG00000002969	KLHL18 (ENSMGAG00000002927)	KIF9 (ENSMGAG00000002896)	SETD2 (ENSMGAG00000002874)	ENSMGAG00000020264	NBEAL2 (ENSMGAG00000002828)
Chicken	MODERN SPECIES	11	CSRNP1 (ENSGALG00010026696)	XIRP1 (ENSGALG00010026630)	ENSGALG00010026666	ENSGALG00010026652	ENSGALG00010026601	OXSR1 (ENSGALG00010026584)	MYD88 (ENSGALG00010026550)	ENSGALG00010026539	ENSGALG00010026516	ACAA1 (ENSGALG00010026485)	DLEC1 (ENSGALG00010026458)	PLCD1 (ENSGALG00010026436)	ENSGALG00010026425	VILL (ENSGALG00010026409)	CTDSPL (ENSGALG00010026360)	GARS1 (ENSGALG00010026268) #22	ENSGALG00010026254	CRHR2 (ENSGALG00010026229) #23	ENSGALG00010025415	MYO1G (ENSGALG00010025377)	CCM2 (ENSGALG00010025345)	ENSGALG00010025298	TBRG4 (ENSGALG00010025951)	CATH1 (ENSGALG00010025943)	CATHB1 (ENSGALG00010025947)	CATH2 (ENSGALG00010027697)	CATH3 (ENSGALG00010025935)	KLHL18 (ENSGALG00010025925)	KIF9 (ENSGALG00010025736)	SETD2 (ENSGALG00010025723)	ENSGALG00010025691
Japanese quail	MODERN SPECIES	11	GORASP1 (ENSCJPG00005010963)	CSRNP1 (ENSCJPG00005010962)	ENSCJPG00005010954	ENSCJPG00005010953	ENSCJPG00005010952	ENSCJPG00005010951	OXSR1 (ENSCJPG00005010950)	MYD88 (ENSCJPG00005010949)	ENSCJPG00005010947	ACAA1 (ENSCJPG00005010946)	DLEC1 (ENSCJPG00005010945)	PLCD1 (ENSCJPG00005010944)	ENSCJPG00005010943	VILL (ENSCJPG00005010942)	CTDSPL (ENSCJPG00005010940)	GARS1 (ENSCJPG00005010911) #22	ENSCJPG00005010734 #23	ENSCJPG00005010732	CCM2 (ENSCJPG00005010647)	ENSCJPG00005010646	ENSCJPG00005010645	TBRG4 (ENSCJPG00005010641)	CATH1 (ENSCJPG00005010628)	ENSCJPG00005010627	CJ-CATH3 (ENSCJPG00005010622)	KLHL18 (ENSCJPG00005010599)	KIF9 (ENSCJPG00005010569)	SETD2 (ENSCJPG00005010568)	ENSCJPG00005010567	CCDC12 (ENSCJPG00005010559)	PTH1R (ENSCJPG00005010557)
Neognathae_b	ANCESTRAL SPECIES	9	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a.a.d	ENSGT00940000154607.b.a.a.c	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263521.a.a.a.a	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596
Neognathae_c	ANCESTRAL SPECIES	12	ENSGT00390000008686.c	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a.a.c	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263521.a.a.a.a	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596
Golden eagle	MODERN SPECIES	19	ENSACCG00020003485	ENSACCG00020003508	CSRNP1 (ENSACCG00020003528)	XIRP1 (ENSACCG00020003537)	SLC22A13 (ENSACCG00020003547)	OXSR1 (ENSACCG00020003561)	MYD88 (ENSACCG00020003581)	ENSACCG00020003602	ENSACCG00020003619	ACAA1 (ENSACCG00020011457)	DLEC1 (ENSACCG00020011507)	PLCD1 (ENSACCG00020011669)	ENSACCG00020011717	VILL (ENSACCG00020011741)	CTDSPL (ENSACCG00020011793)	GARS1 (ENSACCG00020011850) #22	ENSACCG00020012206	CRHR2 (ENSACCG00020012383) #23	MINDY4 (ENSACCG00020012449) #24	AQP1 (ENSACCG00020012492) #25	GHRHR (ENSACCG00020012555) #26	ADCYAP1R1 (ENSACCG00020012657) #27	ENSACCG00020012748	VIPR1 (ENSACCG00020012826)	SEC22C (ENSACCG00020012895)	ENSACCG00020012910	ENSACCG00020012929	ZBTB47 (ENSACCG00020012943)	KLHL40 (ENSACCG00020012966)	HHATL (ENSACCG00020013024)	CCDC13 (ENSACCG00020013054)
Kakapo	MODERN SPECIES		ENSSHBG00005004282	ENSSHBG00005004269	WDR48 (ENSSHBG00005004258)	GORASP1 (ENSSHBG00005004248)	CSRNP1 (ENSSHBG00005004234)	ENSSHBG00005004227	ENSSHBG00005004139	ENSSHBG00005004099	MYD88 (ENSSHBG00005004090)	ENSSHBG00005004077	ACAA1 (ENSSHBG00005004069)	DLEC1 (ENSSHBG00005004061)	PLCD1 (ENSSHBG00005004046)	VILL (ENSSHBG00005004026)	CTDSPL (ENSSHBG00005004008)	GARS1 (ENSSHBG00005003985) #22	ENSSHBG00005003975	CRHR2 (ENSSHBG00005003961) #23	MINDY4 (ENSSHBG00005003948) #24	AQP1 (ENSSHBG00005003936) #25	GHRHR (ENSSHBG00005003880) #26	ENSSHBG00005003859	ADCYAP1R1 (ENSSHBG00005003844) #27	ENSSHBG00005003818	VIPR1 (ENSSHBG00005003800)	SEC22C (ENSSHBG00005003787)	NKTR (ENSSHBG00005003779)	ZBTB47 (ENSSHBG00005003771)	KLHL40 (ENSSHBG00005003760)	HHATL (ENSSHBG00005003739)	CCDC13 (ENSSHBG00005003724)
Passeriformes	ANCESTRAL SPECIES		ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a.d	ENSGT00940000154607.b.a.a.c	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596	ENSGT00940000154276
Great tit	MODERN SPECIES	11	GORASP1 (ENSPMJG00000004555)	CSRNP1 (ENSPMJG00000004549)	ENSPMJG00000004503	ENSPMJG00000004494	ENSPMJG00000004476	ENSPMJG00000004473	OXSR1 (ENSPMJG00000004463)	MYD88 (ENSPMJG00000004459)	ENSPMJG00000004453	ENSPMJG00000004438	ACAA1 (ENSPMJG00000004432)	ENSPMJG00000004408	PLCD1 (ENSPMJG00000004398)	VILL (ENSPMJG00000004392)	CTDSPL (ENSPMJG00000004377)	GARS1 (ENSPMJG00000004364) #22	ENSPMJG00000004362	CRHR2 (ENSPMJG00000004356) #23	MINDY4 (ENSPMJG00000004345) #24	AQP1 (ENSPMJG00000004342) #25	GHRHR (ENSPMJG00000004336) #26	ADCYAP1R1 (ENSPMJG00000004324) #27	ENSPMJG00000004319	VIPR1 (ENSPMJG00000004302)	SEC22C (ENSPMJG00000004290)	NKTR (ENSPMJG00000004257)	ZBTB47 (ENSPMJG00000004252)	KLHL40 (ENSPMJG00000004248)	HHATL (ENSPMJG00000004245)	CCDC13 (ENSPMJG00000004231)	HIGD1A (ENSPMJG00000004228)
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00390000008686.c	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a.a.d	ENSGT00940000154607.b.a.a.c	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596	ENSGT00940000154276
Flycatcher	MODERN SPECIES	11	GORASP1 (ENSFALG00000023242)	CSRNP1 (ENSFALG00000006674)	ENSFALG00000025666	ENSFALG00000028804	ENSFALG00000006641	ENSFALG00000028828	OXSR1 (ENSFALG00000006624)	MYD88 (ENSFALG00000027821)	ENSFALG00000006612	ENSFALG00000006592	ACAA1 (ENSFALG00000006585)	DLEC1 (ENSFALG00000006571)	PLCD1 (ENSFALG00000006558)	VILL (ENSFALG00000006554)	CTDSPL (ENSFALG00000023888)	GARS1 (ENSFALG00000006550) #22	CRHR2 (ENSFALG00000006519) #23	MINDY4 (ENSFALG00000000808) #24	AQP1 (ENSFALG00000000812) #25	GHRHR (ENSFALG00000000828) #26	ADCYAP1R1 (ENSFALG00000000871) #27	ENSFALG00000000919	VIPR1 (ENSFALG00000024420)	SEC22C (ENSFALG00000028342)	NKTR (ENSFALG00000000996)	ENSFALG00000001000	ENSFALG00000023109	ENSFALG00000001007	HHATL (ENSFALG00000001013)	ENSFALG00000029078	HIGD1A (ENSFALG00000001030)
Passeriformes_g	ANCESTRAL SPECIES	6	ENSGT00920000149157	ENSGT00390000008686.c	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a.a.d	ENSGT00940000154607.b.a.a.c	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596	ENSGT00940000154276
Passeroidea	ANCESTRAL SPECIES	6	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a.d	ENSGT00940000154607.b.a.a.c	ENSGT00940000162134	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000180074	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596	ENSGT00940000154276
Common canary	MODERN SPECIES	5	WDR48 (ENSSCAG00000006670)	GORASP1 (ENSSCAG00000006663)	CSRNP1 (ENSSCAG00000006655)	ENSSCAG00000006647	ENSSCAG00000006644	ENSSCAG00000006641	ENSSCAG00000006622	MYD88 (ENSSCAG00000006609)	ENSSCAG00000006602	ENSSCAG00000006592	ACAA1 (ENSSCAG00000006584)	DLEC1 (ENSSCAG00000006553)	PLCD1 (ENSSCAG00000006539)	VILL (ENSSCAG00000006468)	CTDSPL (ENSSCAG00000006455)	GARS1 (ENSSCAG00000006444) #22	CRHR2 (ENSSCAG00000006439) #23	MINDY4 (ENSSCAG00000006424) #24	AQP1 (ENSSCAG00000006415) #25	GHRHR (ENSSCAG00000006246) #26	ADCYAP1R1 (ENSSCAG00000006221) #27	ENSSCAG00000006210	ENSSCAG00000006202	SEC22C (ENSSCAG00000006192)	NKTR (ENSSCAG00000006183)	ENSSCAG00000006177	ZBTB47 (ENSSCAG00000006174)	KLHL40 (ENSSCAG00000006171)	HHATL (ENSSCAG00000006167)	ENSSCAG00000006162	HIGD1A (ENSSCAG00000006158)
Zebra finch	MODERN SPECIES	12	WDR48 (ENSTGUG00000000463)	GORASP1 (ENSTGUG00000000460)	CSRNP1 (ENSTGUG00000023684)	ENSTGUG00000019949	ENSTGUG00000000439	ENSTGUG00000000430	OXSR1 (ENSTGUG00000000423)	ENSTGUG00000000420	ENSTGUG00000021364	ENSTGUG00000000409	ENSTGUG00000000402	DLEC1 (ENSTGUG00000000397)	PLCD1 (ENSTGUG00000000391)	VILL (ENSTGUG00000000377)	CTDSPL (ENSTGUG00000000374)	GARS1 (ENSTGUG00000000364) #22	CRHR2 (ENSTGUG00000000359) #23	MINDY4 (ENSTGUG00000000347) #24	AQP1 (ENSTGUG00000027326) #25	GHRHR (ENSTGUG00000000332) #26	ADCYAP1R1 (ENSTGUG00000000306) #27	ENSTGUG00000000290	VIPR1 (ENSTGUG00000025240)	SEC22C (ENSTGUG00000000283)	NKTR (ENSTGUG00000000276)	ZBTB47 (ENSTGUG00000000272)	KLHL40 (ENSTGUG00000000266)	HHATL (ENSTGUG00000000261)	CCDC13 (ENSTGUG00000000260)	HIGD1A (ENSTGUG00000019656)	ACKR2 (ENSTGUG00000000256)
Medium ground finch	MODERN SPECIES	70	WDR48 (ENSGFOG00000004132)	GORASP1 (ENSGFOG00000004098)	CSRNP1 (ENSGFOG00000004092)	ENSGFOG00000004086	ENSGFOG00000003967	ENSGFOG00000003497	ENSGFOG00000003348	MYD88 (ENSGFOG00000003311)	ENSGFOG00000003288	ENSGFOG00000003265	ACAA1 (ENSGFOG00000003242)	DLEC1 (ENSGFOG00000003129)	PLCD1 (ENSGFOG00000002802)	VILL (ENSGFOG00000002436)	CTDSPL (ENSGFOG00000002293)	GARS1 (ENSGFOG00000001916) #22	CRHR2 (ENSGFOG00000001860) #23	MINDY4 (ENSGFOG00000001840) #24	AQP1 (ENSGFOG00000001839) #25	GHRHR (ENSGFOG00000001773) #26
African ostrich	MODERN SPECIES	410															CTDSPL (ENSSCUG00000007441)	GARS1 (ENSSCUG00000007451) #22	ENSSCUG00000007493	ENSSCUG00000007498	ENSSCUG00000007499 #23	MINDY4 (ENSSCUG00000007501) #24
Australian saltwater crocodile	MODERN SPECIES		WDR48 (ENSCPRG00005003964)	GORASP1 (ENSCPRG00005003956)	TTC21A (ENSCPRG00005003780)	ENSCPRG00005003764	CSRNP1 (ENSCPRG00005003763)	SLC22A13 (ENSCPRG00005003671)	OXSR1 (ENSCPRG00005003415)	MYD88 (ENSCPRG00005003358)	ENSCPRG00005003351	ACAA1 (ENSCPRG00005003330)	DLEC1 (ENSCPRG00005003285)	ENSCPRG00005003275	PLCD1 (ENSCPRG00005003264)	VILL (ENSCPRG00005003212)	CTDSPL (ENSCPRG00005003172)	GARS1 (ENSCPRG00005003127) #22	ENSCPRG00005003126	ENSCPRG00005003125	ENSCPRG00005003076 #23	ENSCPRG00005003021	CCM2 (ENSCPRG00005003010)	ENSCPRG00005003007	ENSCPRG00005003002	ENSCPRG00005002999	KLHL18 (ENSCPRG00005002997)	ENSCPRG00005002987	ENSCPRG00005002971	ENSCPRG00005002936	ENSCPRG00005002930	ENSCPRG00005002928	NBEAL2 (ENSCPRG00005002905)
Cryptodira	ANCESTRAL SPECIES	4	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a	ENSGT00940000162134	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263505.b.b.a.a.a.a.a	ENSGT01100000263533.b.b.b.b.b.w.e.b	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b
Testudinoidea	ANCESTRAL SPECIES	8	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a.b	ENSGT00940000154607.b.a.a.a	ENSGT00940000162134	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263505.b.b.a.a.a.a.a	ENSGT01100000263533.b.b.b.b.b.w.e.b	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338.c	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b
Emydidae	ANCESTRAL SPECIES	35	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a.b	ENSGT00940000154607.b.a.a.a	ENSGT00940000162134	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263521.a.a.a.a.a	ENSGT01100000263533.b.b.b.b.b.w.e.b	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338.c	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b
Three-toed box turtle	MODERN SPECIES	48	ENSTMTG00000011509	CSRNP1 (ENSTMTG00000011498)	ENSTMTG00000011481	ENSTMTG00000011474	ENSTMTG00000011455	ENSTMTG00000011405	ENSTMTG00000011229	OXSR1 (ENSTMTG00000011179)	ENSTMTG00000011162	ENSTMTG00000011114	ACAA1 (ENSTMTG00000011065)	DLEC1 (ENSTMTG00000010936)	PLCD1 (ENSTMTG00000010764)	VILL (ENSTMTG00000010154)	CTDSPL (ENSTMTG00000010066)	GARS1 (ENSTMTG00000009066) #22	ENSTMTG00000008970	ENSTMTG00000008964	CRHR2 (ENSTMTG00000008942) #23	MINDY4 (ENSTMTG00000008798) #24	ENSTMTG00000008774 #25	ENSTMTG00000008764 #25	GHRHR (ENSTMTG00000008727) #26	ADCYAP1R1 (ENSTMTG00000008568) #27	ENSTMTG00000008513	VIPR1 (ENSTMTG00000008453)	SEC22C (ENSTMTG00000008427)	NKTR (ENSTMTG00000008400)	ENSTMTG00000008384	ENSTMTG00000008368	ZBTB47 (ENSTMTG00000008346)
painted turtle	MODERN SPECIES	2396	ENSCPBG00000018433	ENSCPBG00000018437	ENSCPBG00000018444	ENSCPBG00000018454	ENSCPBG00000018459	OXSR1 (ENSCPBG00000018467)	MYD88 (ENSCPBG00000018478)	ENSCPBG00000018481	ENSCPBG00000018484	ENSCPBG00000018489	ACAA1 (ENSCPBG00000018494)	DLEC1 (ENSCPBG00000018504)	PLCD1 (ENSCPBG00000018523)	VILL (ENSCPBG00000018691)	CTDSPL (ENSCPBG00000019473)	GARS1 (ENSCPBG00000019482) #22	ENSCPBG00000019486	ENSCPBG00000019488	ENSCPBG00000019491	CRHR2 (ENSCPBG00000019500) #23
Testudinidae	ANCESTRAL SPECIES	1	ENSGT00950000183072.a	ENSGT00390000001653.l	ENSGT00530000063779.B	ENSGT00950000183580	ENSGT00940000154607.b.a.a.b	ENSGT00940000154607.b.a.a.a	ENSGT00940000162134	ENSGT00510000048324	ENSGT01070000253936	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT01100000263505.b.b.a.a.a.a.a	ENSGT00940000156207.a.b.a	ENSGT00940000156795 #23	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000159858 #26	ENSGT00940000157362 #27	ENSGT00940000166678	ENSGT00940000156402.B	ENSGT00940000159338.c	ENSGT00940000158548	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596
Abingdon island giant tortoise	MODERN SPECIES	1820													PLCD1 (ENSCABG00000001838)	VILL (ENSCABG00000001890)	CTDSPL (ENSCABG00000001944)	GARS1 (ENSCABG00000001947) #22	ENSCABG00000001954
Chinese turtle	MODERN SPECIES	878	WDR48 (ENSPSIG00000004103)	GORASP1 (ENSPSIG00000004490)	TTC21A (ENSPSIG00000004609)	ENSPSIG00000005642	XIRP1 (ENSPSIG00000006262)	ENSPSIG00000000743	ENSPSIG00000006561	MYD88 (ENSPSIG00000008175)	ENSPSIG00000008379	ENSPSIG00000008546	ACAA1 (ENSPSIG00000010862)	DLEC1 (ENSPSIG00000012059)	PLCD1 (ENSPSIG00000006467)	VILL (ENSPSIG00000008538)	CTDSPL (ENSPSIG00000010586)	GARS1 (ENSPSIG00000010935) #22	ENSPSIG00000000760	ENSPSIG00000000780	CRHR2 (ENSPSIG00000013384) #23	MINDY4 (ENSPSIG00000013944) #24	AQP1 (ENSPSIG00000014446) #25	GHRHR (ENSPSIG00000015037) #26	ADCYAP1R1 (ENSPSIG00000015049) #27	ENSPSIG00000016230	VIPR1 (ENSPSIG00000017121)	SEC22C (ENSPSIG00000017831)	ENSPSIG00000017992	ZBTB47 (ENSPSIG00000018010)	KLHL40 (ENSPSIG00000018013)	HHATL (ENSPSIG00000018087)	ENSPSIG00000002662
Anura	ANCESTRAL SPECIES	11	ENSGT00920000149157	ENSGT00390000008686.c	ENSGT00390000005979.a	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000153759.a.a #22	ENSGT00940000156795 #23	ENSGT00940000154384	ENSGT00940000164027	ENSGT00390000005972	ENSGT00940000159600 #24	ENSGT00940000157015 #25	ENSGT00940000157362 #27	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000160089	ENSGT00940000156360	ENSGT00530000063629.b	ENSGT00390000000596	ENSGT00940000154276.db
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000020144	ENSLLEG00000020269	ENSLLEG00000020294	SLC22A13 (ENSLLEG00000020330)	ENSLLEG00000020659	MYD88 (ENSLLEG00000023904)	ENSLLEG00000023967	ENSLLEG00000024110	ACAA1 (ENSLLEG00000024271)	DLEC1 (ENSLLEG00000024536)	PLCD1 (ENSLLEG00000025076)	VILL (ENSLLEG00000025543)	ENSLLEG00000026544	ENSLLEG00000026566	ENSLLEG00000026622	ENSLLEG00000026648 #22	CRHR2 (ENSLLEG00000026826) #23	ENSLLEG00000027068	ENSLLEG00000027091	ENSLLEG00000027145	ENSLLEG00000027158	DNAJC19 (ENSLLEG00000027169)	ENSLLEG00000027225	ENSLLEG00000027237	ENSLLEG00000027258	CDK5 (ENSLLEG00000027283)	ABCB8 (ENSLLEG00000027448)	ENSLLEG00000027617	ENSLLEG00000027722	ENSLLEG00000027808	VIPR1 (ENSLLEG00000027820)
Leishan spiny toad	MODERN SPECIES	86																ENSLLEG00000022597 #22
Frog	MODERN SPECIES	6	ENSXETG00000044203	ENSXETG00000047526	smarcc1 (ENSXETG00000014492)	ENSXETG00000032104	ENSXETG00000044782	slc22a13 (ENSXETG00000014497)	gal3st4.3 (ENSXETG00000014499)	myd88 (ENSXETG00000018434)	cry-dash (ENSXETG00000040646)	map3k22 (ENSXETG00000018442)	acaa1 (ENSXETG00000018446)	dlec1 (ENSXETG00000018451)	plcd1 (ENSXETG00000018458)	vill (ENSXETG00000018470)	ctdspl (ENSXETG00000046735)	gars1 (ENSXETG00000018474) #22	crhr2 (ENSXETG00000018502) #23	ENSXETG00000042539	pomp (ENSXETG00000026990)	dnajc19 (ENSXETG00000041484)	selenon (ENSXETG00000010686)	mindy4 (ENSXETG00000010688) #24	aqp1 (ENSXETG00000045962) #25	ENSXETG00000045728	ENSXETG00000042382	adcyap1r1 (ENSXETG00000010690) #27	ENSXETG00000048522	vipr1 (ENSXETG00000048294)	sec22c (ENSXETG00000040312)	nktr (ENSXETG00000038719)	ENSXETG00000042930
Coelacanth	MODERN SPECIES	3057															CTDSPL (ENSLACG00000004830)	GARS1 (ENSLACG00000002810) #22	ENSLACG00000002528
Actinopterygii	ANCESTRAL SPECIES	24	ENSGT00950000183072.a	ENSGT00530000063779.B	ENSGT00940000158377.b	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT01040000240451.a.b.b.a.a	ENSGT01040000240451.a.b.b.b	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b	ENSGT00940000156360	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000166678	ENSGT00940000157362 #27	ENSGT00940000159858 #26	ENSGT00940000157015 #25	ENSGT00940000159600 #24	ENSGT00940000156795 #23	ENSGT01030000234570.d.b.a.b.b.b
Neopterygii	ANCESTRAL SPECIES	32	ENSGT00950000183072.a	ENSGT00530000063779.B.a	ENSGT00940000158377.b	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT01040000240451.a.b.b.a.a	ENSGT01040000240451.a.b.b.b	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b	ENSGT00940000156360	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000166873	ENSGT00940000157362 #27	ENSGT00940000159858 #26	ENSGT00940000157015.i.a #25	ENSGT00940000159600 #24	ENSGT00940000157015.i.b #25	ENSGT00940000156795 #23
Osteoglossocephalai	ANCESTRAL SPECIES	276					ENSGT00940000156210.c	ENSGT00920000149157	ENSGT00390000008686.c.c	ENSGT00950000183072.a.a.b	ENSGT00530000063779.B.a	ENSGT00940000158377.b.i.b	ENSGT00940000154607.b.b	ENSGT00940000154621.a.b.b.b	ENSGT00940000158392.e.a	ENSGT01040000240451.a.b.b.a.a	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b.c	ENSGT00530000063629.b.d	ENSGT00940000156360.d	ENSGT00940000166630
Clupeocephala	ANCESTRAL SPECIES	151	ENSGT00390000005979.a	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00990000204628
Otomorpha	ANCESTRAL SPECIES	3			ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089.j	ENSGT00940000173926	ENSGT00940000180074	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00990000204628	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00940000165845.c.a	ENSGT00940000159661	ENSGT00530000063679.A
Clupeiformes	ANCESTRAL SPECIES	69				ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089.j	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00990000204628	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00940000165845.c.a	ENSGT00940000159661	ENSGT00530000063679.A	ENSGT00940000154110.b	ENSGT00940000156558.a.a	ENSGT00940000158013
Atlantic herring	MODERN SPECIES	8	bloc1s5 (ENSCHAG00000027641)	EEF1E1 (ENSCHAG00000027643)	slc35b3 (ENSCHAG00000027644)	ENSCHAG00000027646	ENSCHAG00000027647	slc22a13b (ENSCHAG00000027650)	oxsr1b (ENSCHAG00000001319)	myd88 (ENSCHAG00000004163)	cry-dash (ENSCHAG00000004176)	map3k22 (ENSCHAG00000004417)	acaa1 (ENSCHAG00000004599)	DLEC1 (ENSCHAG00000005122)	plcd1a (ENSCHAG00000005449)	VILL (ENSCHAG00000008528)	ctdspla (ENSCHAG00000010049)	gars1 (ENSCHAG00000010176) #22	hhatlb (ENSCHAG00000010276)	klhl40b (ENSCHAG00000010684)	ZBTB47 (ENSCHAG00000010693)	MTRR (ENSCHAG00000010717)	cct5 (ENSCHAG00000010736)	cmbl (ENSCHAG00000011112)	sema5a (ENSCHAG00000011226)	ENSCHAG00000013235	timm21 (ENSCHAG00000013242)	NETO1 (ENSCHAG00000013249)	ENSCHAG00000013299	cbln2b (ENSCHAG00000013309)	SOCS6 (ENSCHAG00000013346)	RTTN (ENSCHAG00000013356)	ENSCHAG00000013630
Denticle herring	MODERN SPECIES	11	ENSDCDG00000002142	pabpn1 (ENSDCDG00000002135)	ngdn (ENSDCDG00000002124)	csrnp1b (ENSDCDG00000002119)	ENSDCDG00000002109	slc22a13b (ENSDCDG00000002097)	oxsr1b (ENSDCDG00000001754)	myd88 (ENSDCDG00000001692)	cry-dash (ENSDCDG00000001682)	map3k22 (ENSDCDG00000001680)	acaa1 (ENSDCDG00000001671)	ENSDCDG00000001667	plcd1a (ENSDCDG00000001353)	VILL (ENSDCDG00000000569)	ctdspla (ENSDCDG00000000359)	gars1 (ENSDCDG00000000288) #22	hhatlb (ENSDCDG00000000184)	klhl40b (ENSDCDG00000035829)	ZBTB47 (ENSDCDG00000035828)	SEC22C (ENSDCDG00000035827)	vipr1b (ENSDCDG00000035825)	ENSDCDG00000035823	rmc1 (ENSDCDG00000035816)	ENSDCDG00000035745	ssr1 (ENSDCDG00000035662)	ENSDCDG00000035660	ENSDCDG00000035659	zgc:162895 (ENSDCDG00000035656)	RAMP3 (ENSDCDG00000035655)	ANKS6 (ENSDCDG00000035653)	ENSDCDG00000035649
Otophysi	ANCESTRAL SPECIES	42	ENSGT00940000157544	ENSGT01080000257410.B.a.b.b.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089.j	ENSGT00940000173926	ENSGT00940000180074	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00990000204628	ENSGT00940000154826	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00940000165845.c.a	ENSGT00940000159661
Characiphysae	ANCESTRAL SPECIES	17	ENSGT01080000257410.B.a.b.b.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00900000141099	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089.j	ENSGT00940000180074	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00990000204628	ENSGT00940000154826	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00940000165845.c.a	ENSGT00940000159661	ENSGT00530000063679.A
Characiphysae_b	ANCESTRAL SPECIES	52	ENSGT01080000257410.B.a.b.b.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00900000141099	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089.j	ENSGT00940000180074.b	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00990000204628	ENSGT00940000154826	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00940000165845.c.a	ENSGT00940000159661	ENSGT00530000063679.A
Characoidei	ANCESTRAL SPECIES	14	ENSGT01080000257410.B.a.b.b.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00900000141099	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089.j	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00990000204628	ENSGT00940000154826	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00940000165845.c.a	ENSGT00940000159661	ENSGT00530000063679.A	ENSGT00940000154110.b
Mexicana tetra	MODERN SPECIES	18	slc22a13b (ENSAMXG00000002238)	oxsr1b (ENSAMXG00000002341)	ENSAMXG00000030738	myd88 (ENSAMXG00000033434)	cry-dash (ENSAMXG00000002370)	map3k22 (ENSAMXG00000018527)	acaa1 (ENSAMXG00000002390)	DLEC1 (ENSAMXG00000002508)	plcd1a (ENSAMXG00000002736)	VILL (ENSAMXG00000002877)	ENSAMXG00000041320	tssk6 (ENSAMXG00000032560)	ENSAMXG00000032327	ctdspla (ENSAMXG00000037932)	spag6 (ENSAMXG00000014898)	gars1 (ENSAMXG00000014895) #22	hhatlb (ENSAMXG00000014877)	klhl40b (ENSAMXG00000014873)	ZBTB47 (ENSAMXG00000014869)	NKTR (ENSAMXG00000014865)	SEC22C (ENSAMXG00000031018)	vipr1b (ENSAMXG00000014845)	ENSAMXG00000014838	cst14a.1 (ENSAMXG00000040702)	mix23 (ENSAMXG00000038961)	fam162a (ENSAMXG00000014822)	KPNA1 (ENSAMXG00000014814)	ENSAMXG00000036170	drd3 (ENSAMXG00000014808)	qtrt2 (ENSAMXG00000038440)	ccdc191 (ENSAMXG00000014793)
Red-bellied piranha	MODERN SPECIES	8	SLCO5A1 (ENSPNAG00000019460)	csrnp1b (ENSPNAG00000019477)	ENSPNAG00000019490	LIMD2 (ENSPNAG00000019502)	slc22a13b (ENSPNAG00000019510)	oxsr1b (ENSPNAG00000019531)	myd88 (ENSPNAG00000019544)	cry-dash (ENSPNAG00000019588)	map3k22 (ENSPNAG00000019613)	acaa1 (ENSPNAG00000019666)	DLEC1 (ENSPNAG00000019824)	plcd1a (ENSPNAG00000019852)	VILL (ENSPNAG00000019905)	ctdspla (ENSPNAG00000020024)	spag6 (ENSPNAG00000020106)	gars1 (ENSPNAG00000020164) #22	hhatlb (ENSPNAG00000020184)	klhl40b (ENSPNAG00000020191)	ZBTB47 (ENSPNAG00000020208)	NKTR (ENSPNAG00000020227)	SEC22C (ENSPNAG00000020231)	vipr1b (ENSPNAG00000020310)	ENSPNAG00000020338	cst14a.1 (ENSPNAG00000020359)	mix23 (ENSPNAG00000020380)	fam162a (ENSPNAG00000020387)	KPNA1 (ENSPNAG00000020428)	ENSPNAG00000020444	drd3 (ENSPNAG00000020476)	qtrt2 (ENSPNAG00000020484)	ccdc191 (ENSPNAG00000020533)
Electric eel	MODERN SPECIES	255	drd3 (ENSEEEG00000020964)	ENSEEEG00000020963	KPNA1 (ENSEEEG00000019780)	fam162a (ENSEEEG00000019770)	mix23 (ENSEEEG00000019769)	cst14a.1 (ENSEEEG00000019768)	ENSEEEG00000019766	vipr1b (ENSEEEG00000019761)	map3k22 (ENSEEEG00000019760)	acaa1 (ENSEEEG00000019754)	ENSEEEG00000019747	plcd1a (ENSEEEG00000019734)	VILL (ENSEEEG00000019572)	ctdspla (ENSEEEG00000019558)	spag6 (ENSEEEG00000019557)	gars1 (ENSEEEG00000019534) #22	hhatlb (ENSEEEG00000019533)	klhl40b (ENSEEEG00000019532)	ZBTB47 (ENSEEEG00000019531)	ENSEEEG00000019530	NKTR (ENSEEEG00000019513)	SEC22C (ENSEEEG00000019511)	ENSEEEG00000019510	asic2 (ENSEEEG00000019508)	brd7 (ENSEEEG00000019507)	adcy7 (ENSEEEG00000019506)
Channel catfish	MODERN SPECIES	15	sulf1 (ENSIPUG00000012470)	SLCO5A1 (ENSIPUG00000012436)	csrnp1b (ENSIPUG00000012422)	ENSIPUG00000012410	ENSIPUG00000012384	slc22a13 (ENSIPUG00000012346)	oxsr1 (ENSIPUG00000012254)	myd88 (ENSIPUG00000012161)	map3k22 (ENSIPUG00000012014)	acaa1 (ENSIPUG00000011849)	dlec1 (ENSIPUG00000011740)	plcd1 (ENSIPUG00000011662)	vill (ENSIPUG00000011624)	ctdspl (ENSIPUG00000011551)	spag6 (ENSIPUG00000011491)	gars1 (ENSIPUG00000011443) #22	hhatlb (ENSIPUG00000011428)	klhl40b (ENSIPUG00000011417)	ZBTB47 (ENSIPUG00000011399)	nktr (ENSIPUG00000011326)	SEC22C (ENSIPUG00000011300)	vipr1b (ENSIPUG00000011233)	ENSIPUG00000011207	ENSIPUG00000011199	ENSIPUG00000011182	ENSIPUG00000011163	ENSIPUG00000011153	mix23 (ENSIPUG00000011099)	fam162a (ENSIPUG00000011047)	KPNA1 (ENSIPUG00000010954)	ENSIPUG00000010936
Cyprinoidei	ANCESTRAL SPECIES	20	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a.a	ENSGT00940000158377.b.i.a.b	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089.j	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00990000204628	ENSGT00940000154826.e	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00940000165845.c.a	ENSGT00940000159661	ENSGT00530000063679.A.m	ENSGT00940000154110.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	396											ENSGT01030000234626.C.z	ENSGT00390000006098	ENSGT00940000158392.e.b.e	ENSGT00940000160253.d	ENSGT01040000240451.a.b.b.a.b.b	ENSGT00940000153759.a.a.e #22	ENSGT00530000063629.b.c.a	ENSGT00940000156360.c.b	ENSGT00940000160089.j.b	ENSGT00940000158548.j.a	ENSGT00940000159338.e	ENSGT00940000156402.B.b	ENSGT00990000204628.a	ENSGT00940000154826.e.a.a	ENSGT00390000011053.o	ENSGT00640000091497.a.t	ENSGT01050000244950.a.a.a.f	ENSGT00940000165845.c.a.a	ENSGT00940000159661.p	ENSGT00530000063679.A.m.b	ENSGT00940000154110.b
Cyprininae_a	ANCESTRAL SPECIES	19	ENSGT00940000157544.f	ENSGT01080000257410.B.a.b.b.b.a	ENSGT00950000183072.a.a.a.a	ENSGT00530000063779.B.b.b	ENSGT00940000158377.b.i.a.b	ENSGT00940000154607.b.a.q	ENSGT00940000154621.a.b.b.a.a	ENSGT00510000048324.d	ENSGT00940000165167.d	ENSGT00940000164858.a	ENSGT01030000234626.C.z	ENSGT00390000006098	ENSGT00940000158392.e.b.e	ENSGT00940000160253.d	ENSGT01040000240451.a.b.b.a.b.b	ENSGT00940000153759.a.a.e #22	ENSGT00530000063629.b.c.a	ENSGT00940000156360.c.b	ENSGT00940000160089.j.b	ENSGT00940000158548.j.a	ENSGT00940000159338.e	ENSGT00940000156402.B.b	ENSGT00990000204628.a	ENSGT00940000154826.e.b	ENSGT00940000154826.e.a.a	ENSGT00390000011053.o	ENSGT00640000091497.a.t	ENSGT01050000244950.a.a.a.f	ENSGT00940000165845.c.a.a	ENSGT00940000159661.p	ENSGT00530000063679.A.m.b
Golden-line barbel	MODERN SPECIES	138					LIMD2 (ENSSGRG00000030377)	slc22a13b (ENSSGRG00000030376)	oxsr1b (ENSSGRG00000029977)	myd88 (ENSSGRG00000029968)	cry-dash (ENSSGRG00000029963)	map3k22 (ENSSGRG00000029962)	acaa1 (ENSSGRG00000029691)	DLEC1 (ENSSGRG00000029677)	plcd1a (ENSSGRG00000029046)	VILL (ENSSGRG00000027832)	CTDSPL (ENSSGRG00000027797)	gars1 (ENSSGRG00000027647) #22	hhatlb (ENSSGRG00000027519)	klhl40b (ENSSGRG00000027518)	ZBTB47 (ENSSGRG00000027517)	SEC22C (ENSSGRG00000027490)	vipr1b (ENSSGRG00000027489)	ENSSGRG00000027487	ENSSGRG00000027462	CSTB (ENSSGRG00000027460)	mix23 (ENSSGRG00000027459)	fam162a (ENSSGRG00000027458)	ENSSGRG00000027456	KPNA1 (ENSSGRG00000026253)	ENSSGRG00000026236	drd3 (ENSSGRG00000026235)	qtrt2 (ENSSGRG00000026232)
Common carp reference	MODERN SPECIES	40	ENSCCRG00000061972	csrnp1b (ENSCCRG00000064440)	ENSCCRG00000075969	ENSCCRG00000065957	slc22a13b (ENSCCRG00000001426)	oxsr1b (ENSCCRG00000028775)	myd88 (ENSCCRG00000021276)	cry-dash (ENSCCRG00000021279)	map3k22 (ENSCCRG00000021289)	ENSCCRG00000042535	acaa1 (ENSCCRG00000061730)	ENSCCRG00000071400	plcd1a (ENSCCRG00000044391)	VILL (ENSCCRG00000021316)	ctdspla (ENSCCRG00000021723)	gars1 (ENSCCRG00000021856) #22	hhatlb (ENSCCRG00000008017)	ZBTB47 (ENSCCRG00000021860)	NKTR (ENSCCRG00000074829)	SEC22C (ENSCCRG00000053674)	vipr1b (ENSCCRG00000007730)	ENSCCRG00000023862	ENSCCRG00000059121	mix23 (ENSCCRG00000056777)	fam162a (ENSCCRG00000050627)	KPNA1 (ENSCCRG00000019804)	ENSCCRG00000031981	drd3 (ENSCCRG00000031979)	ENSCCRG00000070844	qtrt2 (ENSCCRG00000031977)	ccdc191 (ENSCCRG00000010231)
Goldfish	MODERN SPECIES	16							pcyt1ba (ENSCARG00000005728)	FNDC3B (ENSCARG00000005751)	GHSR (ENSCARG00000005777)	ENSCARG00000005954	acaa1 (ENSCARG00000009221)	ENSCARG00000009236	plcd1a (ENSCARG00000009275)	VILL (ENSCARG00000009501)	ctdspla (ENSCARG00000009872)	gars1 (ENSCARG00000009917) #22	hhatlb (ENSCARG00000009970)	ZBTB47 (ENSCARG00000010225)	ENSCARG00000010236	SEC22C (ENSCARG00000010299)	vipr1b (ENSCARG00000010318)	ENSCARG00000010413	ENSCARG00000010484	mix23 (ENSCARG00000010488)	fam162a (ENSCARG00000010500)	KPNA1 (ENSCARG00000010523)	ENSCARG00000011178	drd3 (ENSCARG00000011203)	qtrt2 (ENSCARG00000011214)	ccdc191 (ENSCARG00000011240)	zdhhc23b (ENSCARG00000011259)
Cyprininae	ANCESTRAL SPECIES	45	ENSGT00390000005870.f	ENSGT00940000157544.e	ENSGT01080000257410.B.a.b.b.b.b	ENSGT00950000183072.a.a.a.b	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a.a	ENSGT00940000154607.b.a.r	ENSGT00940000154621.a.b.b.a.b	ENSGT00510000048324.c	ENSGT00940000165167.c	ENSGT00940000164858.b	ENSGT01030000234626.C.y	ENSGT00940000158392.e.b.f	ENSGT00940000160253.c	ENSGT01040000240451.a.b.b.a.b.a	ENSGT00940000153759.a.a.f #22	ENSGT00530000063629.b.c.b	ENSGT00940000156360.c.a	ENSGT00940000160089.j.a	ENSGT00940000158548.j.b	ENSGT00940000159338.f	ENSGT00940000156402.B.a	ENSGT00990000204628.b	ENSGT00940000154826.e.a.b	ENSGT00390000011053.p	ENSGT00640000091497.a.s	ENSGT01050000244950.a.a.a.e	ENSGT00940000165845.c.a.b	ENSGT00940000159661.o	ENSGT00530000063679.A.m.a	ENSGT00940000156558.a.a.b
Goldfish	MODERN SPECIES	43	AGTR1 (ENSCARG00000042022)	zic1 (ENSCARG00000042004)	zic4 (ENSCARG00000041974)	SLCO5A1 (ENSCARG00000041965)	csrnp1b (ENSCARG00000041922)	ENSCARG00000041908	oxsr1b (ENSCARG00000038499)	myd88 (ENSCARG00000038314)	cry-dash (ENSCARG00000038070)	map3k22 (ENSCARG00000037958)	acaa1 (ENSCARG00000037659)	ENSCARG00000037613	plcd1a (ENSCARG00000037161)	VILL (ENSCARG00000035265)	ctdspla (ENSCARG00000035184)	gars1 (ENSCARG00000035169) #22	hhatlb (ENSCARG00000035154)	klhl40b (ENSCARG00000035136)	ZBTB47 (ENSCARG00000035131)	ENSCARG00000035106	SEC22C (ENSCARG00000035092)	vipr1b (ENSCARG00000034944)	ENSCARG00000034840	CSTB (ENSCARG00000034825)	mix23 (ENSCARG00000034792)	fam162a (ENSCARG00000034785)	KPNA1 (ENSCARG00000034714)	ENSCARG00000034686	drd3 (ENSCARG00000034679)	qtrt2 (ENSCARG00000034646)	GRAMD1C (ENSCARG00000034597)
Cyprininae_a	ANCESTRAL SPECIES	57	ENSGT00390000005870.f	ENSGT00940000157544.e	ENSGT01080000257410.B.a.b.b.b.b	ENSGT00950000183072.a.a.a.b	ENSGT00530000063779.B.b.a	ENSGT00940000158377.b.i.a.a	ENSGT00940000154607.b.a.r	ENSGT00940000154621.a.b.b.a.b	ENSGT00510000048324.c	ENSGT00940000165167.c	ENSGT00940000164858.b	ENSGT01030000234626.C.y	ENSGT00940000158392.e.b.f	ENSGT00940000160253.c	ENSGT01040000240451.a.b.b.a.b.a	ENSGT00940000153759.a.a.f #22	ENSGT00530000063629.b.c.b	ENSGT00940000156360.c.a	ENSGT00940000160089.j.a	ENSGT00940000158548.j.b	ENSGT00940000159338.f	ENSGT00940000156402.B.a	ENSGT00990000204628.b	ENSGT00940000154826.e.a.b	ENSGT00390000011053.p	ENSGT00640000091497.a.s	ENSGT01050000244950.a.a.a.e	ENSGT00940000165845.c.a.b	ENSGT00940000159661.o	ENSGT00530000063679.A.m.a	ENSGT00940000156558.a.a.b
Common carp reference	MODERN SPECIES	14	PREX2 (ENSCCRG00000080090)	zgc:162928 (ENSCCRG00000036292)	sulf1 (ENSCCRG00000036324)	ENSCCRG00000080046	csrnp1b (ENSCCRG00000053358)	ENSCCRG00000028770	ENSCCRG00000073849	slc22a13b (ENSCCRG00000024497)	oxsr1b (ENSCCRG00000021159)	cry-dash (ENSCCRG00000075363)	map3k22 (ENSCCRG00000008472)	acaa1 (ENSCCRG00000075937)	plcd1a (ENSCCRG00000069105)	VILL (ENSCCRG00000046543)	ctdspla (ENSCCRG00000029886)	gars1 (ENSCCRG00000008452) #22	hhatlb (ENSCCRG00000021858)	klhl40b (ENSCCRG00000073887)	ZBTB47 (ENSCCRG00000078821)	NKTR (ENSCCRG00000008004)	SEC22C (ENSCCRG00000007995)	vipr1b (ENSCCRG00000003284)	ENSCCRG00000050637	cst14a.1 (ENSCCRG00000023855)	fam162a (ENSCCRG00000055380)	ENSCCRG00000073127	ENSCCRG00000071120	drd3 (ENSCCRG00000019745)	qtrt2 (ENSCCRG00000019738)	zdhhc23b (ENSCCRG00000019715)	GRAMD1C (ENSCCRG00000055261)
Golden-line barbel	DUPLICATION
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	3705																gars1 (ENSSGRG00000003305) #22
Golden-line barbel	MODERN SPECIES	64	sulf1 (ENSSGRG00000040482)	SLCO5A1 (ENSSGRG00000040579)	csrnp1b (ENSSGRG00000040582)	ENSSGRG00000040586	LIMD2 (ENSSGRG00000040590)	slc22a13b (ENSSGRG00000040594)	oxsr1b (ENSSGRG00000040601)	myd88 (ENSSGRG00000041724)	cry-dash (ENSSGRG00000041737)	map3k22 (ENSSGRG00000041742)	ENSSGRG00000041747	plcd1a (ENSSGRG00000041774)	VILL (ENSSGRG00000042478)	ctdspla (ENSSGRG00000043911)	gars1 (ENSSGRG00000043963) #22	gars1 (ENSSGRG00000044471) #22	hhatlb (ENSSGRG00000044476)	klhl40b (ENSSGRG00000044557)	ZBTB47 (ENSSGRG00000044558)	ENSSGRG00000044560	SEC22C (ENSSGRG00000044562)	vipr1b (ENSSGRG00000044563)	ENSSGRG00000044567	ENSSGRG00000044576	mix23 (ENSSGRG00000044578)	fam162a (ENSSGRG00000044585)	KPNA1 (ENSSGRG00000044627)	ENSSGRG00000045891	drd3 (ENSSGRG00000045892)	qtrt2 (ENSSGRG00000045893)	zdhhc23b (ENSSGRG00000045897)
Golden-line barbel	MODERN SPECIES	64	zgc:162928 (ENSSGRG00000040477)	sulf1 (ENSSGRG00000040482)	SLCO5A1 (ENSSGRG00000040579)	csrnp1b (ENSSGRG00000040582)	ENSSGRG00000040586	LIMD2 (ENSSGRG00000040590)	slc22a13b (ENSSGRG00000040594)	oxsr1b (ENSSGRG00000040601)	myd88 (ENSSGRG00000041724)	cry-dash (ENSSGRG00000041737)	map3k22 (ENSSGRG00000041742)	ENSSGRG00000041747	plcd1a (ENSSGRG00000041774)	VILL (ENSSGRG00000042478)	ctdspla (ENSSGRG00000043911)	gars1 (ENSSGRG00000043963) #22	gars1 (ENSSGRG00000044471) #22	hhatlb (ENSSGRG00000044476)	klhl40b (ENSSGRG00000044557)	ZBTB47 (ENSSGRG00000044558)	ENSSGRG00000044560	SEC22C (ENSSGRG00000044562)	vipr1b (ENSSGRG00000044563)	ENSSGRG00000044567	ENSSGRG00000044576	mix23 (ENSSGRG00000044578)	fam162a (ENSSGRG00000044585)	KPNA1 (ENSSGRG00000044627)	ENSSGRG00000045891	drd3 (ENSSGRG00000045892)	qtrt2 (ENSSGRG00000045893)
Zebrafish	MODERN SPECIES	16	sulf1 (ENSDARG00000038428)	SLCO5A1 (ENSDARG00000071685)	csrnp1b (ENSDARG00000038429)	ENSDARG00000100303	LIMD2 (ENSDARG00000112015)	slc22a13b (ENSDARG00000059166)	oxsr1b (ENSDARG00000027500)	myd88 (ENSDARG00000010169)	cry-dash (ENSDARG00000002396)	map3k22 (ENSDARG00000074219)	acaa1 (ENSDARG00000004687)	ENSDARG00000075825	plcd1a (ENSDARG00000059123)	VILL (ENSDARG00000001909)	ctdspla (ENSDARG00000071673)	gars1 (ENSDARG00000059070) #22	hhatlb (ENSDARG00000005139)	klhl40b (ENSDARG00000019125)	ZBTB47 (ENSDARG00000079547)	NKTR (ENSDARG00000059097)	SEC22C (ENSDARG00000063387)	vipr1b (ENSDARG00000059058)	ENSDARG00000087238	ENSDARG00000093044	ENSDARG00000110153	cst14a.1 (ENSDARG00000028164)	cst14a.2 (ENSDARG00000045352)	mix23 (ENSDARG00000045351)	fam162a (ENSDARG00000063344)	KPNA1 (ENSDARG00000016360)	ENSDARG00000089919
Euteleosteomorpha	DUPLICATION
Euteleosteomorpha	ANCESTRAL SPECIES	580															ENSGT01040000240451.a.b.b.b	ENSGT00940000153759.a.a.g #22
Acanthomorphata	ANCESTRAL SPECIES	17	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000154607.b.a	ENSGT00940000158377.b.i.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT01040000240451.a.b.b.b	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717
Cod	DUPLICATION
Cod	MODERN SPECIES	15	slc22a13b (ENSGMOG00000023707)	ENSGMOG00000024050	ENSGMOG00000031936	oxsr1b (ENSGMOG00000022457)	ENSGMOG00000024763	ENSGMOG00000022290	ENSGMOG00000034348	myd88 (ENSGMOG00000010938)	cry-dash (ENSGMOG00000010925)	map3k22 (ENSGMOG00000010888)	acaa1 (ENSGMOG00000010850)	ENSGMOG00000022481	plcd1a (ENSGMOG00000010770)	VILL (ENSGMOG00000010755)	ctdspla (ENSGMOG00000032730)	gars1 (ENSGMOG00000010728) #22	gars1 (ENSGMOG00000008856) #22	hhatlb (ENSGMOG00000003835)	klhl40b (ENSGMOG00000003812)	ENSGMOG00000031489	NKTR (ENSGMOG00000022593)	ENSGMOG00000033023	ENSGMOG00000003689	vipr1b (ENSGMOG00000000393)	ENSGMOG00000034661	ENSGMOG00000024233	KPNA1 (ENSGMOG00000008749)	ENSGMOG00000008741	mix23 (ENSGMOG00000008731)	ENSGMOG00000028411	ENSGMOG00000029899
Cod	MODERN SPECIES	15	ENSGMOG00000024050	ENSGMOG00000031936	oxsr1b (ENSGMOG00000022457)	ENSGMOG00000024763	ENSGMOG00000022290	ENSGMOG00000034348	myd88 (ENSGMOG00000010938)	cry-dash (ENSGMOG00000010925)	map3k22 (ENSGMOG00000010888)	acaa1 (ENSGMOG00000010850)	ENSGMOG00000022481	plcd1a (ENSGMOG00000010770)	VILL (ENSGMOG00000010755)	ctdspla (ENSGMOG00000032730)	gars1 (ENSGMOG00000010728) #22	gars1 (ENSGMOG00000008856) #22	hhatlb (ENSGMOG00000003835)	klhl40b (ENSGMOG00000003812)	ENSGMOG00000031489	NKTR (ENSGMOG00000022593)	ENSGMOG00000033023	ENSGMOG00000003689	vipr1b (ENSGMOG00000000393)	ENSGMOG00000034661	ENSGMOG00000024233	KPNA1 (ENSGMOG00000008749)	ENSGMOG00000008741	mix23 (ENSGMOG00000008731)	ENSGMOG00000028411	ENSGMOG00000029899	ENSGMOG00000005157
Euacanthomorphacea	ANCESTRAL SPECIES	16	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT01040000240451.a.b.b.b	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053
Pinecone sodierfish	MODERN SPECIES	12	slc22a13b (ENSMMDG00005014860)	slc22a13b (ENSMMDG00005014867)	slc22a13b (ENSMMDG00005014874)	slc22a13b (ENSMMDG00005014877)	slc22a13b (ENSMMDG00005014881)	slc22a13b (ENSMMDG00005014892)	oxsr1b (ENSMMDG00005014929)	myd88 (ENSMMDG00005017199)	cry-dash (ENSMMDG00005017204)	map3k22 (ENSMMDG00005017227)	acaa1 (ENSMMDG00005017256)	ENSMMDG00005017458	plcd1a (ENSMMDG00005017481)	VILL (ENSMMDG00005019207)	ctdspla (ENSMMDG00005019283)	gars1 (ENSMMDG00005019314) #22	gars1 (ENSMMDG00005019326) #22	hhatlb (ENSMMDG00005019331)	klhl40b (ENSMMDG00005019336)	ZBTB47 (ENSMMDG00005019346)	ENSMMDG00005019347	NKTR (ENSMMDG00005002506)	SEC22C (ENSMMDG00005002514)	vipr1b (ENSMMDG00005002519)	ENSMMDG00005002534	NANOS2 (ENSMMDG00005002544)	KPNA1 (ENSMMDG00005002653)	fam162a (ENSMMDG00005004037)	mix23 (ENSMMDG00005004048)	cst14a.1 (ENSMMDG00005004058)	ENSMMDG00005004071
Percomorphaceae	ANCESTRAL SPECIES	24	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717
Tiger tail seahorse	MODERN SPECIES	392	pdcd6 (ENSHCOG00000004594)	ENSHCOG00000004599	tm9sf1 (ENSHCOG00000004627)	ENSHCOG00000004642	fen1 (ENSHCOG00000004670)	pck2 (ENSHCOG00000004715)	psme1 (ENSHCOG00000004723)	dcaf11 (ENSHCOG00000004748)	thtpa (ENSHCOG00000004758)	ENSHCOG00000004785	ENSHCOG00000004804	ENSHCOG00000004834	plcd1a (ENSHCOG00000005161)	ENSHCOG00000005204	ctdspla (ENSHCOG00000005216)	gars1 (ENSHCOG00000005261) #22	gars1 (ENSHCOG00000005286) #22	hhatlb (ENSHCOG00000005307)	klhl40b (ENSHCOG00000000151)	NKTR (ENSHCOG00000005446)	SEC22C (ENSHCOG00000000177)	mos (ENSHCOG00000005477)	plag1 (ENSHCOG00000000577)	chchd7 (ENSHCOG00000000715)	ENSHCOG00000005752	ENSHCOG00000005787	ENSHCOG00000005791	plppr5b (ENSHCOG00000005808)	snx7 (ENSHCOG00000005816)	PPP1R3G (ENSHCOG00000005827)	LYRM4 (ENSHCOG00000005832)
Percomorphaceae_B	ANCESTRAL SPECIES	20	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053
Ovalentaria	ANCESTRAL SPECIES	21	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167
Ovalentaria_B	ANCESTRAL SPECIES	20	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167
Pomacentridae	ANCESTRAL SPECIES	11	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x.i	ENSGT00940000154607.b.a.x.j	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826
Pomacentridae_A	ANCESTRAL SPECIES	8	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x.i	ENSGT00940000154607.b.a.x.j	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826
Amphiprion	ANCESTRAL SPECIES	7	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x.i.b	ENSGT00940000154607.b.a.x.j	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826
Clown anemonefish	MODERN SPECIES	624						slc22a13b (ENSAOCG00000008663)	slc22a13b (ENSAOCG00000008680)	oxsr1b (ENSAOCG00000008689)	myd88 (ENSAOCG00000008695)	cry-dash (ENSAOCG00000008740)	map3k22 (ENSAOCG00000008802)	ENSAOCG00000008917	plcd1a (ENSAOCG00000008952)	VILL (ENSAOCG00000009004)	ctdspla (ENSAOCG00000009055)	gars1 (ENSAOCG00000009108) #22	gars1 (ENSAOCG00000002479) #22	hhatlb (ENSAOCG00000009176)	klhl40b (ENSAOCG00000009192)	ZBTB47 (ENSAOCG00000009222)	NKTR (ENSAOCG00000009242)	SEC22C (ENSAOCG00000009258)	vipr1b (ENSAOCG00000009372)	ENSAOCG00000001812	ENSAOCG00000009412	ENSAOCG00000009429	KPNA1 (ENSAOCG00000009438)	fam162a (ENSAOCG00000009455)	mix23 (ENSAOCG00000000582)	CSTA (ENSAOCG00000009607)	CSTA (ENSAOCG00000009622)
Orange clownfish	MODERN SPECIES	14	csrnp1b (ENSAPEG00000017300)	ENSAPEG00000017326	slc22a13b (ENSAPEG00000017348)	LIMD2 (ENSAPEG00000017411)	slc22a13b (ENSAPEG00000017432)	slc22a13b (ENSAPEG00000017544)	slc22a13b (ENSAPEG00000017576)	oxsr1b (ENSAPEG00000017631)	myd88 (ENSAPEG00000017990)	cry-dash (ENSAPEG00000017999)	map3k22 (ENSAPEG00000018071)	ENSAPEG00000018173	plcd1a (ENSAPEG00000018217)	VILL (ENSAPEG00000018324)	ctdspla (ENSAPEG00000018781)	gars1 (ENSAPEG00000018850) #22	gars1 (ENSAPEG00000018903) #22	hhatlb (ENSAPEG00000018958)	klhl40b (ENSAPEG00000018984)	ZBTB47 (ENSAPEG00000018994)	NKTR (ENSAPEG00000019031)	SEC22C (ENSAPEG00000019042)	vipr1b (ENSAPEG00000019050)	ENSAPEG00000019100	ENSAPEG00000019117	ENSAPEG00000019139	KPNA1 (ENSAPEG00000019153)	fam162a (ENSAPEG00000019169)	mix23 (ENSAPEG00000019188)	CSTA (ENSAPEG00000019211)	cst14a.1 (ENSAPEG00000019223)
Spiny chromis	MODERN SPECIES	960												ENSAPOG00000019710	plcd1a (ENSAPOG00000019733)	VILL (ENSAPOG00000019845)	ctdspla (ENSAPOG00000019906)	gars1 (ENSAPOG00000019999) #22	gars1 (ENSAPOG00000020089) #22	hhatlb (ENSAPOG00000020135)	klhl40b (ENSAPOG00000000572)	ZBTB47 (ENSAPOG00000020173)	NKTR (ENSAPOG00000020183)	SEC22C (ENSAPOG00000020189)	vipr1b (ENSAPOG00000020198)	ENSAPOG00000020215	ENSAPOG00000020259	NANOS2 (ENSAPOG00000020274)	KPNA1 (ENSAPOG00000020345)	fam162a (ENSAPOG00000020359)	mix23 (ENSAPOG00000020382)	ENSAPOG00000020387
Bicolor damselfish	MODERN SPECIES	1466								ENSSPAG00000011725	myd88 (ENSSPAG00000011740)	cry-dash (ENSSPAG00000011754)	map3k22 (ENSSPAG00000011810)	ENSSPAG00000011840	plcd1a (ENSSPAG00000011867)	VILL (ENSSPAG00000011914)	ctdspla (ENSSPAG00000011943)	gars1 (ENSSPAG00000012003) #22
Cichlidae	ANCESTRAL SPECIES	18	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167
Pseudocrenilabrinae	ANCESTRAL SPECIES	20	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826.n
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	19	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826.n
Haplochromini	ANCESTRAL SPECIES	21	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a.m.b	ENSGT00530000064862	ENSGT00950000183135.A.a.n	ENSGT00950000183135.A.a.m.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a
Burton s mouthbrooder	MODERN SPECIES	270	NCK1 (ENSHBUG00000016086)	slc35g2b (ENSHBUG00000016099)	ENSHBUG00000016120	ENSHBUG00000016133	csrnp1b (ENSHBUG00000016137)	ENSHBUG00000016141	slc22a13b (ENSHBUG00000016149)	oxsr1b (ENSHBUG00000016177)	myd88 (ENSHBUG00000016188)	cry-dash (ENSHBUG00000016224)	map3k22 (ENSHBUG00000016292)	ENSHBUG00000016318	plcd1a (ENSHBUG00000016342)	VILL (ENSHBUG00000016379)	ctdspla (ENSHBUG00000016416)	gars1 (ENSHBUG00000016481) #22	gars1 (ENSHBUG00000000815) #22	hhatlb (ENSHBUG00000016582)	klhl40b (ENSHBUG00000016591)	ZBTB47 (ENSHBUG00000016619)	NKTR (ENSHBUG00000016643)	SEC22C (ENSHBUG00000016657)	vipr1b (ENSHBUG00000016702)	ENSHBUG00000016727	ENSHBUG00000016758	NANOS2 (ENSHBUG00000016772)	KPNA1 (ENSHBUG00000016841)	fam162a (ENSHBUG00000016866)	mix23 (ENSHBUG00000016889)	CSTA (ENSHBUG00000016899)	ENSHBUG00000016964
Haplochromini_A	ANCESTRAL SPECIES	21	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180167	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a.m.b	ENSGT00530000064862	ENSGT00950000183135.A.a.n	ENSGT00950000183135.A.a.m.a	ENSGT01050000244950.a.a.a
P. nyererei	MODERN SPECIES	302	slc35g2b (ENSPNYG00000005806)	ENSPNYG00000005785	ENSPNYG00000005770	csrnp1b (ENSPNYG00000005761)	ENSPNYG00000005672	LIMD2 (ENSPNYG00000005661)	slc22a13b (ENSPNYG00000005647)	oxsr1b (ENSPNYG00000005631)	myd88 (ENSPNYG00000005613)	cry-dash (ENSPNYG00000005507)	map3k22 (ENSPNYG00000005481)	ENSPNYG00000005356	plcd1a (ENSPNYG00000005315)	VILL (ENSPNYG00000005168)	ctdspla (ENSPNYG00000005093)	gars1 (ENSPNYG00000005017) #22	gars1 (ENSPNYG00000004960) #22	hhatlb (ENSPNYG00000004749)	klhl40b (ENSPNYG00000004694)	ZBTB47 (ENSPNYG00000004668)	ENSPNYG00000004653	ENSPNYG00000004639	ENSPNYG00000004629	SEC22C (ENSPNYG00000004619)	vipr1b (ENSPNYG00000004580)	ENSPNYG00000004558	NANOS2 (ENSPNYG00000004545)	KPNA1 (ENSPNYG00000004500)	fam162a (ENSPNYG00000004485)	mix23 (ENSPNYG00000004466)	ENSPNYG00000004449
Haplochromini_B	ANCESTRAL SPECIES	18	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180167	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a.m.b	ENSGT00950000183135.A.a.m.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053
Eastern happy	MODERN SPECIES	21	NCK1 (ENSACLG00000027352)	slc35g2b (ENSACLG00000027351)	ENSACLG00000027345	ENSACLG00000027340	csrnp1b (ENSACLG00000027338)	ENSACLG00000027332	slc22a13b (ENSACLG00000027330)	oxsr1b (ENSACLG00000027322)	myd88 (ENSACLG00000027319)	cry-dash (ENSACLG00000027299)	map3k22 (ENSACLG00000027280)	ENSACLG00000027269	plcd1a (ENSACLG00000027250)	VILL (ENSACLG00000027218)	ctdspla (ENSACLG00000027198)	gars1 (ENSACLG00000027174) #22	gars1 (ENSACLG00000027158) #22	hhatlb (ENSACLG00000027110)	klhl40b (ENSACLG00000027102)	ENSACLG00000027100	ZBTB47 (ENSACLG00000027087)	NKTR (ENSACLG00000027075)	SEC22C (ENSACLG00000027069)	vipr1b (ENSACLG00000027040)	ENSACLG00000027014	NANOS2 (ENSACLG00000027005)	KPNA1 (ENSACLG00000026976)	fam162a (ENSACLG00000026973)	mix23 (ENSACLG00000026966)	ENSACLG00000026963	ENSACLG00000026960
Zebra mbuna	MODERN SPECIES	1112	slc35g2b (ENSMZEG00005017714)	ENSMZEG00005017718	ENSMZEG00005017737	csrnp1b (ENSMZEG00005019565)	ENSMZEG00005019573	LIMD2 (ENSMZEG00005019576)	slc22a13b (ENSMZEG00005019580)	oxsr1b (ENSMZEG00005019587)	myd88 (ENSMZEG00005019596)	cry-dash (ENSMZEG00005019606)	map3k22 (ENSMZEG00005019623)	DLEC1 (ENSMZEG00005019661)	plcd1a (ENSMZEG00005019702)	VILL (ENSMZEG00005019707)	ctdspla (ENSMZEG00005019717)	gars1 (ENSMZEG00005019740) #22	gars1 (ENSMZEG00005019754) #22	hhatlb (ENSMZEG00005019764)	klhl40b (ENSMZEG00005019769)	ZBTB47 (ENSMZEG00005019770)	ENSMZEG00005019775	ENSMZEG00005019777	ENSMZEG00005019781	SEC22C (ENSMZEG00005019783)	vipr1b (ENSMZEG00005019790)	ENSMZEG00005019800	plod2 (ENSMZEG00005019823)	dipk2ab (ENSMZEG00005021968)	SLC9A9 (ENSMZEG00005021971)	CHST2 (ENSMZEG00005021974)	trpc1 (ENSMZEG00005021979)
Lyretail cichlid	MODERN SPECIES	325	NCK1 (ENSNBRG00000017538)	slc35g2b (ENSNBRG00000017545)	GORASP1 (ENSNBRG00000017567)	ENSNBRG00000017652	csrnp1b (ENSNBRG00000017756)	LIMD2 (ENSNBRG00000017764)	slc22a13b (ENSNBRG00000017787)	oxsr1b (ENSNBRG00000017887)	myd88 (ENSNBRG00000018166)	cry-dash (ENSNBRG00000018178)	map3k22 (ENSNBRG00000018214)	DLEC1 (ENSNBRG00000018276)	plcd1a (ENSNBRG00000018469)	VILL (ENSNBRG00000018493)	ctdspla (ENSNBRG00000018557)	gars1 (ENSNBRG00000018585) #22	gars1 (ENSNBRG00000018643) #22	hhatlb (ENSNBRG00000018666)	klhl40b (ENSNBRG00000018706)	ZBTB47 (ENSNBRG00000018718)	ENSNBRG00000018751	ENSNBRG00000018760	SEC22C (ENSNBRG00000018770)	vipr1b (ENSNBRG00000018796)	NANOS2 (ENSNBRG00000018838)	KPNA1 (ENSNBRG00000018864)	fam162a (ENSNBRG00000018901)	mix23 (ENSNBRG00000018934)
Midas cichlid	MODERN SPECIES	363	slc35g2b (ENSACIG00000019015)	ENSACIG00000019027	ENSACIG00000019129	csrnp1b (ENSACIG00000019328)	LIMD2 (ENSACIG00000019348)	slc22a13b (ENSACIG00000019358)	ENSACIG00000019372	oxsr1b (ENSACIG00000019381)	myd88 (ENSACIG00000019425)	cry-dash (ENSACIG00000020287)	map3k22 (ENSACIG00000020310)	DLEC1 (ENSACIG00000020341)	plcd1a (ENSACIG00000020428)	VILL (ENSACIG00000020649)	ctdspla (ENSACIG00000020718)	gars1 (ENSACIG00000020744) #22	gars1 (ENSACIG00000020797) #22	hhatlb (ENSACIG00000020837)	klhl40b (ENSACIG00000020870)	ZBTB47 (ENSACIG00000020938)	ENSACIG00000020947	NKTR (ENSACIG00000020974)	SEC22C (ENSACIG00000021088)	vipr1b (ENSACIG00000021119)	ENSACIG00000021188	ENSACIG00000021212	KPNA1 (ENSACIG00000021218)	fam162a (ENSACIG00000021239)	mix23 (ENSACIG00000021272)	CSTA (ENSACIG00000021286)	cst14b.1 (ENSACIG00000021383)
Atherinomorphae	ANCESTRAL SPECIES	19	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154607.b.a.x	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167	ENSGT00940000155717	ENSGT00940000167204
Oryzias	ANCESTRAL SPECIES	18	ENSGT00940000156601	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826	ENSGT00940000165845.c.a	ENSGT00940000159661
Oryzias_a	ANCESTRAL SPECIES	16	ENSGT00940000156929	ENSGT00940000156601	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826.o	ENSGT00940000165845.c.a	ENSGT00940000159661	ENSGT00530000063679.A
Chinese medaka	MODERN SPECIES	1041	gyg1b (ENSOSIG00000006935)	bdh1 (ENSOSIG00000006936)	NCK1 (ENSOSIG00000006937)	slc35g2b (ENSOSIG00000006938)	ENSOSIG00000006939	csrnp1b (ENSOSIG00000006940)	LIMD2 (ENSOSIG00000006942)	slc22a13b (ENSOSIG00000006943)	oxsr1b (ENSOSIG00000006962)	myd88 (ENSOSIG00000009510)	cry-dash (ENSOSIG00000009512)	map3k22 (ENSOSIG00000009513)	plcd1a (ENSOSIG00000009516)	VILL (ENSOSIG00000009915)	ctdspla (ENSOSIG00000016222)	gars1 (ENSOSIG00000016259) #22	hhatlb (ENSOSIG00000016282)	klhl40b (ENSOSIG00000016292)	ZBTB47 (ENSOSIG00000016293)	ENSOSIG00000016295	SEC22C (ENSOSIG00000016297)	vipr1b (ENSOSIG00000016321)	NANOS2 (ENSOSIG00000016356)	KPNA1 (ENSOSIG00000016366)	fam162a (ENSOSIG00000016580)	mix23 (ENSOSIG00000016582)	ENSOSIG00000016584	ENSOSIG00000016586	drd3 (ENSOSIG00000016587)	qtrt2 (ENSOSIG00000016589)	ccdc191 (ENSOSIG00000016590)
Japanese Medaka HdrR	MODERN SPECIES	12	bdh1 (ENSORLG00000009948)	NCK1 (ENSORLG00000009923)	slc35g2b (ENSORLG00000009906)	ENSORLG00000009893	csrnp1b (ENSORLG00000009885)	ENSORLG00000024418	slc22a13b (ENSORLG00000009872)	oxsr1b (ENSORLG00000009854)	myd88 (ENSORLG00000009788)	cry-dash (ENSORLG00000009768)	map3k22 (ENSORLG00000009751)	DLEC1 (ENSORLG00000009723)	plcd1a (ENSORLG00000009694)	VILL (ENSORLG00000009593)	ctdspla (ENSORLG00000009494)	gars1 (ENSORLG00000009470) #22	hhatlb (ENSORLG00000009434)	klhl40b (ENSORLG00000009415)	ZBTB47 (ENSORLG00000009398)	NKTR (ENSORLG00000009388)	SEC22C (ENSORLG00000009365)	vipr1b (ENSORLG00000009354)	ENSORLG00000009347	nanos2 (ENSORLG00000009335)	KPNA1 (ENSORLG00000009322)	fam162a (ENSORLG00000025106)	mix23 (ENSORLG00000024197)	ENSORLG00000029248	ENSORLG00000009258	ENSORLG00000009248	ENSORLG00000022295
Oryzias_b	ANCESTRAL SPECIES	16	ENSGT00940000156601	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826	ENSGT00940000167204.b	ENSGT00940000167204.a
Indian medaka	MODERN SPECIES	14	bdh1 (ENSOMEG00000005468)	NCK1 (ENSOMEG00000005500)	slc35g2b (ENSOMEG00000005515)	ENSOMEG00000005575	csrnp1b (ENSOMEG00000005600)	LIMD2 (ENSOMEG00000005609)	slc22a13b (ENSOMEG00000005640)	oxsr1b (ENSOMEG00000005675)	myd88 (ENSOMEG00000005693)	cry-dash (ENSOMEG00000005737)	map3k22 (ENSOMEG00000005798)	ENSOMEG00000005873	plcd1a (ENSOMEG00000005925)	VILL (ENSOMEG00000006002)	ctdspla (ENSOMEG00000006030)	gars1 (ENSOMEG00000000133) #22	hhatlb (ENSOMEG00000006093)	klhl40b (ENSOMEG00000006122)	ZBTB47 (ENSOMEG00000006147)	NKTR (ENSOMEG00000006320)	SEC22C (ENSOMEG00000006370)	vipr1b (ENSOMEG00000006437)	ENSOMEG00000006476	ENSOMEG00000006504	NANOS2 (ENSOMEG00000006512)	KPNA1 (ENSOMEG00000006551)	mix23 (ENSOMEG00000006576)	cst14a.1 (ENSOMEG00000006588)	ENSOMEG00000006597	ENSOMEG00000006603	ENSOMEG00000006640
Cyprinodontiformes	ANCESTRAL SPECIES	20	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154607.b.a.x	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826	ENSGT00940000155717	ENSGT00940000167204
Cyprinodontoidei	ANCESTRAL SPECIES	27	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154607.b.a.x.p	ENSGT00940000154607.b.a.x.o	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167	ENSGT00940000155717
Poeciliinae	ANCESTRAL SPECIES	20	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154607.b.a.x.p	ENSGT00940000154607.b.a.x.o	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862.d.a.b	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT01030000235167	ENSGT00940000172067
Poecilia	ANCESTRAL SPECIES	17	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154607.b.a.x.p	ENSGT00940000154607.b.a.x.o	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862.d.a.b	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT01030000235167	ENSGT00940000172067
NAME_6	ANCESTRAL SPECIES	22	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154607.b.a.x.p	ENSGT00940000154607.b.a.x.o	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b.a	ENSGT00940000158392.e.b.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548.c	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862.d.a.b	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167	ENSGT00940000172067	ENSGT00940000157108
Sailfin molly	MODERN SPECIES	71																gars1 (ENSPLAG00000008038) #22	hhatlb (ENSPLAG00000007987)	klhl40b (ENSPLAG00000007944)	ZBTB47 (ENSPLAG00000007917)	NKTR (ENSPLAG00000007880)	SEC22C (ENSPLAG00000007849)	vipr1b (ENSPLAG00000007835)	ENSPLAG00000000165	ENSPLAG00000007807	NANOS2 (ENSPLAG00000007786)	KPNA1 (ENSPLAG00000007763)	fam162a (ENSPLAG00000007674)	ENSPLAG00000007665	mix23 (ENSPLAG00000007608)	ENSPLAG00000007590	ENSPLAG00000007565
Amazon molly	MODERN SPECIES	1295														VILL (ENSPFOG00000022900)	ctdspla (ENSPFOG00000004782)	gars1 (ENSPFOG00000004593) #22	hhatlb (ENSPFOG00000004482)	klhl40b (ENSPFOG00000004437)	ZBTB47 (ENSPFOG00000004330)	NKTR (ENSPFOG00000004072)	SEC22C (ENSPFOG00000003992)
Guppy	MODERN SPECIES	451	ENSPREG00000021390	csrnp1b (ENSPREG00000021382)	ENSPREG00000021350	ENSPREG00000021358	slc22a13b (ENSPREG00000021336)	slc22a13b (ENSPREG00000021312)	slc22a13b (ENSPREG00000021285)	oxsr1b (ENSPREG00000021250)	myd88 (ENSPREG00000021234)	cry-dash (ENSPREG00000021219)	map3k22 (ENSPREG00000021179)	ENSPREG00000021123	plcd1a (ENSPREG00000021087)	VILL (ENSPREG00000021063)	CTDSPL (ENSPREG00000021038)	gars1 (ENSPREG00000020960) #22	hhatlb (ENSPREG00000020934)	klhl40b (ENSPREG00000020909)	ZBTB47 (ENSPREG00000020897)	NKTR (ENSPREG00000020612)	SEC22C (ENSPREG00000020529)	vipr1b (ENSPREG00000020510)	ENSPREG00000020492	ENSPREG00000020476	NANOS2 (ENSPREG00000020465)	KPNA1 (ENSPREG00000020432)	fam162a (ENSPREG00000020422)	mix23 (ENSPREG00000020406)	CSTA (ENSPREG00000020397)	ENSPREG00000020377	ENSPREG00000020362
Platyfish	MODERN SPECIES	13	ENSXMAG00000009212	csrnp1b (ENSXMAG00000009214)	ENSXMAG00000025579	slc22a13b (ENSXMAG00000009221)	slc22a13b (ENSXMAG00000029586)	slc22a13b (ENSXMAG00000030064)	slc22a13b (ENSXMAG00000029042)	oxsr1b (ENSXMAG00000022528)	myd88 (ENSXMAG00000021546)	cry-dash (ENSXMAG00000009285)	map3k22 (ENSXMAG00000009286)	ENSXMAG00000009312	plcd1a (ENSXMAG00000009326)	VILL (ENSXMAG00000009353)	ctdspla (ENSXMAG00000028416)	gars1 (ENSXMAG00000009402) #22	hhatlb (ENSXMAG00000009425)	klhl40b (ENSXMAG00000009443)	ENSXMAG00000024424	ZBTB47 (ENSXMAG00000009463)	NKTR (ENSXMAG00000009479)	SEC22C (ENSXMAG00000009504)	vipr1b (ENSXMAG00000009513)	ENSXMAG00000009551	ENSXMAG00000009552	ENSXMAG00000020157	KPNA1 (ENSXMAG00000027948)	fam162a (ENSXMAG00000009574)	mix23 (ENSXMAG00000022563)	ENSXMAG00000024186	CSTA (ENSXMAG00000030037)
NAME_4	ANCESTRAL SPECIES	38	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154607.b.a.x.p	ENSGT00940000154607.b.a.x.o	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167.j
Sheepshead minnow	MODERN SPECIES	786															ctdspla (ENSCVAG00000007197)	gars1 (ENSCVAG00000007149) #22	hhatlb (ENSCVAG00000007083)	klhl40b (ENSCVAG00000007069)	ZBTB47 (ENSCVAG00000007026)	NKTR (ENSCVAG00000007018)	SEC22C (ENSCVAG00000000820)	vipr1b (ENSCVAG00000006994)	ENSCVAG00000006958	NANOS2 (ENSCVAG00000006947)	KPNA1 (ENSCVAG00000006924)	fam162a (ENSCVAG00000006881)	mix23 (ENSCVAG00000006873)	ENSCVAG00000006858	ENSCVAG00000006851	ENSCVAG00000006847	ENSCVAG00000006840
Mummichog	MODERN SPECIES	2445	ENSFHEG00000013637	csrnp1b (ENSFHEG00000013628)	ENSFHEG00000013612	slc22a13b (ENSFHEG00000013600)	ENSFHEG00000013591	slc22a13b (ENSFHEG00000013543)	oxsr1b (ENSFHEG00000000594)	myd88 (ENSFHEG00000013442)	cry-dash (ENSFHEG00000013427)	map3k22 (ENSFHEG00000013380)	ENSFHEG00000013280	ENSFHEG00000013269	plcd1a (ENSFHEG00000013255)	VILL (ENSFHEG00000013239)	ctdspla (ENSFHEG00000013227)	gars1 (ENSFHEG00000013189) #22	hhatlb (ENSFHEG00000013160)	klhl40b (ENSFHEG00000000296)	ZBTB47 (ENSFHEG00000013071)	NKTR (ENSFHEG00000013042)	ENSFHEG00000013033	SEC22C (ENSFHEG00000013015)	vipr1b (ENSFHEG00000012991)	ENSFHEG00000012856	NANOS2 (ENSFHEG00000012835)	KPNA1 (ENSFHEG00000012777)	fam162a (ENSFHEG00000012759)	mix23 (ENSFHEG00000012752)	ENSFHEG00000012723	ENSFHEG00000012714	ENSFHEG00000012674
Aplocheiloidei	ANCESTRAL SPECIES	18	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154607.b.a.x	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826	ENSGT00940000155717	ENSGT00940000167204	ENSGT01010000227412
Mangrove rivulus	MODERN SPECIES	7	ENSKMAG00000011428	slc22a13b (ENSKMAG00000011396)	slc22a13b (ENSKMAG00000011363)	slc22a13b (ENSKMAG00000011331)	slc22a13b (ENSKMAG00000011296)	slc22a13b (ENSKMAG00000011268)	slc22a13b (ENSKMAG00000011212)	oxsr1b (ENSKMAG00000011188)	myd88 (ENSKMAG00000011171)	cry-dash (ENSKMAG00000011097)	map3k22 (ENSKMAG00000011040)	ENSKMAG00000010958	plcd1a (ENSKMAG00000010691)	VILL (ENSKMAG00000010534)	ctdspla (ENSKMAG00000010502)	gars1 (ENSKMAG00000010428) #22	hhatlb (ENSKMAG00000010384)	klhl40b (ENSKMAG00000010364)	ZBTB47 (ENSKMAG00000010330)	NKTR (ENSKMAG00000010172)	SEC22C (ENSKMAG00000010124)	vipr1b (ENSKMAG00000010078)	ENSKMAG00000010037	KPNA1 (ENSKMAG00000009974)	fam162a (ENSKMAG00000010009)	mix23 (ENSKMAG00000009955)	CSTA (ENSKMAG00000009946)	CSTA (ENSKMAG00000009931)	CSTA (ENSKMAG00000009919)	ENSKMAG00000009905	ENSKMAG00000009889
Percomorphaceae_C	ANCESTRAL SPECIES	21	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053
Eupercaria	ANCESTRAL SPECIES	20	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167
Tetraodontidae	ANCESTRAL SPECIES	18	ENSGT01030000234528.B.b.a.a.b.c	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x.g.a	ENSGT00940000154607.b.a.x.g.b	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a.g	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00900000141099.u	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000167204	ENSGT00940000165845.c.a	ENSGT00940000159661	ENSGT00530000063679.A	ENSGT00940000154110.b
Tetraodon	MODERN SPECIES	21	ENSTNIG00000001057	csrnp1b (ENSTNIG00000012749)	slc22a13b (ENSTNIG00000000028)	slc22a13b (ENSTNIG00000012748)	slc22a13b (ENSTNIG00000000333)	slc22a13b (ENSTNIG00000001339)	oxsr1b (ENSTNIG00000012747)	myd88 (ENSTNIG00000012746)	cry-dash (ENSTNIG00000012745)	map3k22 (ENSTNIG00000012744)	ENSTNIG00000012743	spag6 (ENSTNIG00000012742)	plcd1a (ENSTNIG00000012741)	VILL (ENSTNIG00000012740)	ctdspla (ENSTNIG00000012739)	gars1 (ENSTNIG00000012738) #22	hhatlb (ENSTNIG00000012737)	klhl40b (ENSTNIG00000012736)	ZBTB47 (ENSTNIG00000001401)	NKTR (ENSTNIG00000012735)	SEC22C (ENSTNIG00000012734)	vipr1b (ENSTNIG00000012733)	KPNA1 (ENSTNIG00000012732)	fam162a (ENSTNIG00000012731)	mix23 (ENSTNIG00000012730)	ENSTNIG00000012729	ENSTNIG00000012728	ENSTNIG00000012727	drd3 (ENSTNIG00000012726)	qtrt2 (ENSTNIG00000012725)	zdhhc23b (ENSTNIG00000012724)
Eupecaria_A	ANCESTRAL SPECIES	19	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167
Eupecaria_B	ANCESTRAL SPECIES	19	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167
Eupecaria_C	ANCESTRAL SPECIES	19	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000165845.c.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	17	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167	ENSGT00940000154826	ENSGT00940000165845.c.a	ENSGT00940000159661.n
European seabass	DUPLICATION
European seabass	MODERN SPECIES	8	NCK1 (ENSDLAG00005030071)	TMEM22 (ENSDLAG00005033515)	ENSDLAG00005008701	ENSDLAG00005008693	csrnp1b (ENSDLAG00005008686)	ENSDLAG00005028245	slc22a13b (ENSDLAG00005008613)	slc22a13b (ENSDLAG00005008547)	oxsr1b (ENSDLAG00005007101)	CRY-DASH (ENSDLAG00005006961)	map3k22 (ENSDLAG00005006903)	ENSDLAG00005006829	plcd1a (ENSDLAG00005004449)	VILL (ENSDLAG00005014862)	CTDSL (ENSDLAG00005031689)	gars1 (ENSDLAG00005012902) #22	gars1 (ENSDLAG00005017209) #22	hhatlb (ENSDLAG00005012810)	klhl40b (ENSDLAG00005012799)	ZBTB47 (ENSDLAG00005012786)	NKTR (ENSDLAG00005012734)	SEC22C (ENSDLAG00005012695)	vipr1b (ENSDLAG00005029886)	ENSDLAG00005012075	ENSDLAG00005029847	E2IG5 (ENSDLAG00005026931)	ENSDLAG00005034933	CSTA (ENSDLAG00005009815)	MIX23 (ENSDLAG00005009790)	ENSDLAG00005020034	ENSDLAG00005029962
European seabass	MODERN SPECIES	8	TMEM22 (ENSDLAG00005033515)	ENSDLAG00005008701	ENSDLAG00005008693	csrnp1b (ENSDLAG00005008686)	ENSDLAG00005028245	slc22a13b (ENSDLAG00005008613)	slc22a13b (ENSDLAG00005008547)	oxsr1b (ENSDLAG00005007101)	CRY-DASH (ENSDLAG00005006961)	map3k22 (ENSDLAG00005006903)	ENSDLAG00005006829	plcd1a (ENSDLAG00005004449)	VILL (ENSDLAG00005014862)	CTDSL (ENSDLAG00005031689)	gars1 (ENSDLAG00005012902) #22	gars1 (ENSDLAG00005017209) #22	hhatlb (ENSDLAG00005012810)	klhl40b (ENSDLAG00005012799)	ZBTB47 (ENSDLAG00005012786)	NKTR (ENSDLAG00005012734)	SEC22C (ENSDLAG00005012695)	vipr1b (ENSDLAG00005029886)	ENSDLAG00005012075	ENSDLAG00005029847	E2IG5 (ENSDLAG00005026931)	ENSDLAG00005034933	CSTA (ENSDLAG00005009815)	MIX23 (ENSDLAG00005009790)	ENSDLAG00005020034	ENSDLAG00005029962	drd3 (ENSDLAG00005009728)
Large yellow croaker	MODERN SPECIES	494	slc35g2b (ENSLCRG00005018815)	ENSLCRG00005018817	ENSLCRG00005018819	csrnp1b (ENSLCRG00005018823)	LIMD2 (ENSLCRG00005018828)	slc22a13b (ENSLCRG00005018833)	slc22a13b (ENSLCRG00005018844)	oxsr1b (ENSLCRG00005018876)	myd88 (ENSLCRG00005019729)	cry-dash (ENSLCRG00005019735)	map3k22 (ENSLCRG00005019781)	ENSLCRG00005019793	plcd1a (ENSLCRG00005019798)	VILL (ENSLCRG00005019909)	ctdspla (ENSLCRG00005021240)	gars1 (ENSLCRG00005021250) #22	hhatlb (ENSLCRG00005021258)	klhl40b (ENSLCRG00005021266)	ZBTB47 (ENSLCRG00005021267)	NKTR (ENSLCRG00005021269)	SEC22C (ENSLCRG00005021306)	vipr1b (ENSLCRG00005021311)	ENSLCRG00005021441	ENSLCRG00005021443	KPNA1 (ENSLCRG00005021457)	fam162a (ENSLCRG00005022224)	mix23 (ENSLCRG00005022227)	ENSLCRG00005022228	ENSLCRG00005022229	ENSLCRG00005022230	ENSLCRG00005022231
Perciformes	ANCESTRAL SPECIES	21	ENSGT00940000154826	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00950000183135.A.a	ENSGT00940000168651	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000180074	ENSGT00940000160089	ENSGT00940000156360.c	ENSGT00530000063629.b.c	ENSGT00940000153759.a.a.h #22	ENSGT00940000153759.a.a.g #22	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000160253	ENSGT00940000158392.e.b	ENSGT00390000006098	ENSGT00940000165361	ENSGT00940000164858	ENSGT00940000165167	ENSGT00510000048324	ENSGT00940000154621.a.b.b.a	ENSGT00940000154607.b.a.w	ENSGT00940000154607.b.a.x	ENSGT00940000158377.b.i.a	ENSGT00950000183072.a.a.a	ENSGT01030000234528.B.b.a.a.b	ENSGT00390000008686.c.d
Cottioidei	ANCESTRAL SPECIES	21	ENSGT00940000154826	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00950000183135.A.a	ENSGT00940000168651	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000173926	ENSGT00940000180074	ENSGT00940000160089	ENSGT00940000156360.c	ENSGT00530000063629.b.c	ENSGT00940000153759.a.a.h #22	ENSGT00940000153759.a.a.g #22	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000160253	ENSGT00940000158392.e.b	ENSGT00940000165361	ENSGT00940000164858	ENSGT00940000165167	ENSGT00510000048324	ENSGT00940000154621.a.b.b.a	ENSGT00940000154607.b.a.w	ENSGT00940000158377.b.i.a	ENSGT00950000183072.a.a.a	ENSGT00390000008686.c.d	ENSGT00940000153249.b.d.b	ENSGT00940000156601	ENSGT00940000156929
Lumpfish	DUPLICATION
Lumpfish	MODERN SPECIES	12	mix23 (ENSCLMG00005021185)	fam162a (ENSCLMG00005021184)	KPNA1 (ENSCLMG00005020984)	NANOS2 (ENSCLMG00005020979)	ENSCLMG00005020974	vipr1b (ENSCLMG00005020966)	SEC22C (ENSCLMG00005020960)	ENSCLMG00005020958	ENSCLMG00005020956	ENSCLMG00005020953	ZBTB47 (ENSCLMG00005020950)	klhl40b (ENSCLMG00005020947)	hhatlb (ENSCLMG00005020945)	GARS1 (ENSCLMG00005020940) #22	gars1 (ENSCLMG00005020933) #22	GARS1 (ENSCLMG00005020930) #22	ctdspla (ENSCLMG00005020915)	VILL (ENSCLMG00005020150)	plcd1a (ENSCLMG00005019985)	ENSCLMG00005019980	map3k22 (ENSCLMG00005019958)	cry-dash (ENSCLMG00005019957)	myd88 (ENSCLMG00005019955)	oxsr1b (ENSCLMG00005019657)	slc22a13b (ENSCLMG00005019655)	LIMD2 (ENSCLMG00005019654)	csrnp1b (ENSCLMG00005019653)	GORASP1 (ENSCLMG00005019652)	slc35g2b (ENSCLMG00005019651)	NCK1 (ENSCLMG00005019650)	bdh1 (ENSCLMG00005019649)
Lumpfish	MODERN SPECIES	12	ENSCLMG00005021188	cst14a.1 (ENSCLMG00005021187)	mix23 (ENSCLMG00005021185)	fam162a (ENSCLMG00005021184)	KPNA1 (ENSCLMG00005020984)	NANOS2 (ENSCLMG00005020979)	ENSCLMG00005020974	vipr1b (ENSCLMG00005020966)	SEC22C (ENSCLMG00005020960)	ENSCLMG00005020958	ENSCLMG00005020956	ENSCLMG00005020953	ZBTB47 (ENSCLMG00005020950)	klhl40b (ENSCLMG00005020947)	hhatlb (ENSCLMG00005020945)	GARS1 (ENSCLMG00005020940) #22	gars1 (ENSCLMG00005020933) #22	GARS1 (ENSCLMG00005020930) #22	ctdspla (ENSCLMG00005020915)	VILL (ENSCLMG00005020150)	plcd1a (ENSCLMG00005019985)	ENSCLMG00005019980	map3k22 (ENSCLMG00005019958)	cry-dash (ENSCLMG00005019957)	myd88 (ENSCLMG00005019955)	oxsr1b (ENSCLMG00005019657)	slc22a13b (ENSCLMG00005019655)	LIMD2 (ENSCLMG00005019654)	csrnp1b (ENSCLMG00005019653)	GORASP1 (ENSCLMG00005019652)	slc35g2b (ENSCLMG00005019651)
Stickleback	MODERN SPECIES	20	ENSGACG00000003266	mix23 (ENSGACG00000003271)	fam162a (ENSGACG00000003283)	KPNA1 (ENSGACG00000003285)	ENSGACG00000003337	vipr1b (ENSGACG00000003341)	SEC22C (ENSGACG00000003352)	NKTR (ENSGACG00000003367)	ZBTB47 (ENSGACG00000003372)	klhl40b (ENSGACG00000003377)	hhatlb (ENSGACG00000003389)	ENSGACG00000003404	ENSGACG00000003405	ENSGACG00000003407	ENSGACG00000003408	gars1 (ENSGACG00000003410) #22	ctdspla (ENSGACG00000003452)	VILL (ENSGACG00000003464)	plcd1a (ENSGACG00000003489)	ENSGACG00000003500	map3k22 (ENSGACG00000003515)	ENSGACG00000003523	cry-dash (ENSGACG00000003525)	myd88 (ENSGACG00000003543)	ENSGACG00000003550	slc22a13b (ENSGACG00000003553)	ENSGACG00000003600	csrnp1b (ENSGACG00000003601)	ENSGACG00000003604	slc35g2b (ENSGACG00000003606)	NCK1 (ENSGACG00000003608)
Perciformes_a	ANCESTRAL SPECIES	22	ENSGT00940000154826	ENSGT01100000266426	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00950000183135.A.a	ENSGT00940000168651	ENSGT00940000156402.B	ENSGT00940000159338	ENSGT00940000158548	ENSGT00940000180074	ENSGT00940000160089	ENSGT00940000156360.c	ENSGT00530000063629.b.c	ENSGT00940000153759.a.a.h #22	ENSGT00940000153759.a.a.g #22	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000160253	ENSGT00940000158392.e.b	ENSGT00390000006098	ENSGT00940000165361	ENSGT00940000164858	ENSGT00940000165167	ENSGT00510000048324	ENSGT00940000154621.a.b.b.a	ENSGT00940000154607.b.a.w	ENSGT00940000154607.b.a.x	ENSGT00940000158377.b.i.a	ENSGT00950000183072.a.a.a	ENSGT01030000234528.B.b.a.a.b	ENSGT00390000008686.c.d
Channel bull blenny	MODERN SPECIES	12	ENSCGOG00000015103	mix23 (ENSCGOG00000015090)	fam162a (ENSCGOG00000015106)	KPNA1 (ENSCGOG00000015140)	NANOS2 (ENSCGOG00000016672)	ENSCGOG00000016673	vipr1b (ENSCGOG00000016685)	ENSCGOG00000016718	SEC22C (ENSCGOG00000016720)	ENSCGOG00000016723	ENSCGOG00000016725	ZBTB47 (ENSCGOG00000016728)	klhl40b (ENSCGOG00000016734)	hhatlb (ENSCGOG00000016762)	gars1 (ENSCGOG00000016768) #22	gars1 (ENSCGOG00000016987) #22	ctdspla (ENSCGOG00000017347)	VILL (ENSCGOG00000017429)	plcd1a (ENSCGOG00000017960)	ENSCGOG00000019180	map3k22 (ENSCGOG00000019186)	cry-dash (ENSCGOG00000019209)	myd88 (ENSCGOG00000019275)	oxsr1b (ENSCGOG00000019330)	slc22a13b (ENSCGOG00000020082)	slc22a13b (ENSCGOG00000020087)	ENSCGOG00000020093	csrnp1b (ENSCGOG00000020095)	ENSCGOG00000020108	ENSCGOG00000020486	slc35g2b (ENSCGOG00000020489)
Pike perch	MODERN SPECIES	58	ENSSLUG00000015478	cst14a.1 (ENSSLUG00000015464)	ENSSLUG00000015454	mix23 (ENSSLUG00000015445)	fam162a (ENSSLUG00000015431)	KPNA1 (ENSSLUG00000014243)	ENSSLUG00000014203	vipr1b (ENSSLUG00000014191)	SEC22C (ENSSLUG00000014183)	NKTR (ENSSLUG00000014174)	ENSSLUG00000014168	ZBTB47 (ENSSLUG00000014162)	klhl40b (ENSSLUG00000014157)	hhatlb (ENSSLUG00000014152)	gars1 (ENSSLUG00000014117) #22	gars1 (ENSSLUG00000013974) #22	ctdspla (ENSSLUG00000013890)	VILL (ENSSLUG00000013110)	plcd1a (ENSSLUG00000012575)	ENSSLUG00000012539	map3k22 (ENSSLUG00000012508)	cry-dash (ENSSLUG00000012433)	oxsr1b (ENSSLUG00000011056)	slc22a13b (ENSSLUG00000010983)	ENSSLUG00000010978
Ballan wrasse	MODERN SPECIES	8	ENSLBEG00000020899	ENSLBEG00000020860	eci2 (ENSLBEG00000020811)	inhbaa (ENSLBEG00000020777)	sugct (ENSLBEG00000020723)	acvr2ba (ENSLBEG00000020683)	slc22a13b (ENSLBEG00000020629)	oxsr1b (ENSLBEG00000020548)	myd88 (ENSLBEG00000020520)	cry-dash (ENSLBEG00000020418)	map3k22 (ENSLBEG00000020359)	ENSLBEG00000020148	plcd1a (ENSLBEG00000019642)	VILL (ENSLBEG00000019445)	ctdspla (ENSLBEG00000019361)	gars1 (ENSLBEG00000019228) #22	gars1 (ENSLBEG00000019179) #22	hhatlb (ENSLBEG00000019154)	klhl40b (ENSLBEG00000019133)	ZBTB47 (ENSLBEG00000019067)	ENSLBEG00000018999	ENSLBEG00000018967	SEC22C (ENSLBEG00000018955)	vipr1b (ENSLBEG00000018888)	ENSLBEG00000018847	NANOS2 (ENSLBEG00000018836)	KPNA1 (ENSLBEG00000018793)	fam162a (ENSLBEG00000018775)	mix23 (ENSLBEG00000018746)	ENSLBEG00000018723	ENSLBEG00000018704
Percomorphaceae_D	ANCESTRAL SPECIES	21	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717
Anabantaria	ANCESTRAL SPECIES	22	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000165845.c.a	ENSGT00940000159661
Anabantoidei	ANCESTRAL SPECIES	20	ENSGT00940000156601	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000165845.c.a	ENSGT00940000159661
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	15	NCK1 (ENSBSLG00000004829)	slc35g2b (ENSBSLG00000004821)	ENSBSLG00000004794	ENSBSLG00000004765	csrnp1b (ENSBSLG00000004746)	ENSBSLG00000004433	slc22a13b (ENSBSLG00000004421)	oxsr1b (ENSBSLG00000004082)	myd88 (ENSBSLG00000003946)	cry-dash (ENSBSLG00000003813)	map3k22 (ENSBSLG00000003706)	ENSBSLG00000003609	plcd1a (ENSBSLG00000002878)	VILL (ENSBSLG00000002731)	CTDSPL (ENSBSLG00000002675)	gars1 (ENSBSLG00000002563) #22	ENSBSLG00000002526	klhl40b (ENSBSLG00000002345)	ZBTB47 (ENSBSLG00000002227)	ENSBSLG00000002212	gars1 (ENSBSLG00000002164) #22	hhatlb (ENSBSLG00000001945)	klhl40b (ENSBSLG00000001941)	ZBTB47 (ENSBSLG00000001940)	NKTR (ENSBSLG00000001935)	SEC22C (ENSBSLG00000001930)	vipr1b (ENSBSLG00000001839)	ENSBSLG00000001810	NANOS2 (ENSBSLG00000001807)	ENSBSLG00000001661	fam162a (ENSBSLG00000001651)
Siamese fighting fish	MODERN SPECIES	15	ENSBSLG00000004433	slc22a13b (ENSBSLG00000004421)	oxsr1b (ENSBSLG00000004082)	myd88 (ENSBSLG00000003946)	cry-dash (ENSBSLG00000003813)	map3k22 (ENSBSLG00000003706)	ENSBSLG00000003609	plcd1a (ENSBSLG00000002878)	VILL (ENSBSLG00000002731)	CTDSPL (ENSBSLG00000002675)	gars1 (ENSBSLG00000002563) #22	ENSBSLG00000002526	klhl40b (ENSBSLG00000002345)	ZBTB47 (ENSBSLG00000002227)	ENSBSLG00000002212	gars1 (ENSBSLG00000002164) #22	hhatlb (ENSBSLG00000001945)	klhl40b (ENSBSLG00000001941)	ZBTB47 (ENSBSLG00000001940)	NKTR (ENSBSLG00000001935)	SEC22C (ENSBSLG00000001930)	vipr1b (ENSBSLG00000001839)	ENSBSLG00000001810	NANOS2 (ENSBSLG00000001807)	ENSBSLG00000001661	fam162a (ENSBSLG00000001651)	CSTA (ENSBSLG00000001649)	mix23 (ENSBSLG00000001645)	CSTA (ENSBSLG00000001644)	mix23 (ENSBSLG00000001637)	ENSBSLG00000001635
Climbing perch	MODERN SPECIES	11	ENSATEG00000007029	ENSATEG00000007073	csrnp1b (ENSATEG00000028053)	ENSATEG00000007742	slc22a13b (ENSATEG00000025937)	slc22a13b (ENSATEG00000027019)	slc22a13b (ENSATEG00000029202)	oxsr1b (ENSATEG00000008014)	myd88 (ENSATEG00000008089)	cry-dash (ENSATEG00000008026)	map3k22 (ENSATEG00000008099)	ENSATEG00000008162	plcd1a (ENSATEG00000008172)	VILL (ENSATEG00000008196)	ctdspla (ENSATEG00000008305)	gars1 (ENSATEG00000008784) #22	hhatlb (ENSATEG00000008895)	klhl40b (ENSATEG00000008939)	ZBTB47 (ENSATEG00000009048)	ENSATEG00000009091	vipr1b (ENSATEG00000009134)	ENSATEG00000009373	ENSATEG00000009393	KPNA1 (ENSATEG00000009410)	FAM162A (ENSATEG00000026117)	mix23 (ENSATEG00000009463)	CSTA (ENSATEG00000026934)	ENSATEG00000009635	ENSATEG00000009650	drd3 (ENSATEG00000009656)	qtrt2 (ENSATEG00000009688)
Zig-zag eel	MODERN SPECIES	12	bdh1 (ENSMAMG00000002524)	ENSMAMG00000002509	slc35g2b (ENSMAMG00000002493)	ENSMAMG00000002468	csrnp1b (ENSMAMG00000002455)	ENSMAMG00000002434	slc22a13b (ENSMAMG00000002424)	oxsr1b (ENSMAMG00000002398)	myd88 (ENSMAMG00000002382)	cry-dash (ENSMAMG00000002310)	map3k22 (ENSMAMG00000002259)	DLEC1 (ENSMAMG00000002142)	plcd1a (ENSMAMG00000002078)	VILL (ENSMAMG00000002041)	ctdspla (ENSMAMG00000002006)	gars1 (ENSMAMG00000001894) #22	hhatlb (ENSMAMG00000001874)	klhl40b (ENSMAMG00000001831)	ZBTB47 (ENSMAMG00000001808)	NKTR (ENSMAMG00000001783)	SEC22C (ENSMAMG00000001771)	vipr1b (ENSMAMG00000001724)	ENSMAMG00000001694	ENSMAMG00000001682	ENSMAMG00000001671	drd3 (ENSMAMG00000001639)	qtrt2 (ENSMAMG00000001620)	ccdc191 (ENSMAMG00000001576)	zdhhc23b (ENSMAMG00000001565)	GRAMD1C (ENSMAMG00000001522)	ATP6V1A (ENSMAMG00000001472)
Carangaria	ANCESTRAL SPECIES	21	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717
Carangaria_A	ANCESTRAL SPECIES	15	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826
Barramundi perch	MODERN SPECIES	47	NCK1 (ENSLCAG00010010142)	slc35g2b (ENSLCAG00010010143)	GORASP1 (ENSLCAG00010010146)	ENSLCAG00010010147	csrnp1b (ENSLCAG00010010149)	ENSLCAG00010010152	slc22a13b (ENSLCAG00010010153)	oxsr1b (ENSLCAG00010010190)	myd88 (ENSLCAG00010010397)	cry-dash (ENSLCAG00010010408)	map3k22 (ENSLCAG00010010410)	DLEC1 (ENSLCAG00010010418)	plcd1a (ENSLCAG00010010456)	VILL (ENSLCAG00010010531)	ctdspla (ENSLCAG00010010554)	gars1 (ENSLCAG00010010591) #22	gars1 (ENSLCAG00010010713) #22	hhatlb (ENSLCAG00010010729)	klhl40b (ENSLCAG00010010734)	ZBTB47 (ENSLCAG00010010737)	ENSLCAG00010010741	ENSLCAG00010010743	NKTR (ENSLCAG00010010746)	SEC22C (ENSLCAG00010010749)	vipr1b (ENSLCAG00010010756)	ENSLCAG00010010772	NANOS2 (ENSLCAG00010010773)	KPNA1 (ENSLCAG00010010939)	fam162a (ENSLCAG00010011984)	mix23 (ENSLCAG00010011990)	CSTA (ENSLCAG00010012000)
Seriola	ANCESTRAL SPECIES	27	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324.e	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717.gb	ENSGT01100000263504.a.b.b.b.b.x.a	ENSGT00950000183089.c.a.k.a.l
Greater amberjack	MODERN SPECIES	33	ENSSDUG00000017354	ENSSDUG00000017316	csrnp1b (ENSSDUG00000017297)	ENSSDUG00000017284	LIMD2 (ENSSDUG00000017271)	slc22a13b (ENSSDUG00000017234)	oxsr1b (ENSSDUG00000017205)	myd88 (ENSSDUG00000017195)	myd88 (ENSSDUG00000017117)	cry-dash (ENSSDUG00000017085)	map3k22 (ENSSDUG00000017055)	ENSSDUG00000016997	plcd1a (ENSSDUG00000016936)	VILL (ENSSDUG00000016897)	ctdspla (ENSSDUG00000016863)	gars1 (ENSSDUG00000016795) #22	gars1 (ENSSDUG00000016758) #22	hhatlb (ENSSDUG00000016725)	klhl40b (ENSSDUG00000016716)	ZBTB47 (ENSSDUG00000016704)	NKTR (ENSSDUG00000016685)	SEC22C (ENSSDUG00000016667)	vipr1b (ENSSDUG00000016631)	ENSSDUG00000016585	NANOS2 (ENSSDUG00000016576)	KPNA1 (ENSSDUG00000016540)	fam162a (ENSSDUG00000016523)	mix23 (ENSSDUG00000016509)	CSTA (ENSSDUG00000016479)	ENSSDUG00000016419	ENSSDUG00000016402
Yellowtail amberjack	MODERN SPECIES	2777	NCK1 (ENSSLDG00000014945)	slc35g2b (ENSSLDG00000014934)	ENSSLDG00000014921	ENSSLDG00000014817	csrnp1b (ENSSLDG00000014777)	ENSSLDG00000014762	slc22a13b (ENSSLDG00000014743)	oxsr1b (ENSSLDG00000014715)	myd88 (ENSSLDG00000014687)	cry-dash (ENSSLDG00000014646)	map3k22 (ENSSLDG00000014577)	ENSSLDG00000014533	plcd1a (ENSSLDG00000014485)	VILL (ENSSLDG00000014393)	ctdspla (ENSSLDG00000014337)	gars1 (ENSSLDG00000014279) #22	gars1 (ENSSLDG00000014238) #22	hhatlb (ENSSLDG00000014204)	klhl40b (ENSSLDG00000014189)	ZBTB47 (ENSSLDG00000014177)	NKTR (ENSSLDG00000013986)	SEC22C (ENSSLDG00000013929)	vipr1b (ENSSLDG00000013889)	ENSSLDG00000013842	ENSSLDG00000013821	ENSSLDG00000013805	NANOS2 (ENSSLDG00000013795)	KPNA1 (ENSSLDG00000013759)	fam162a (ENSSLDG00000013742)	mix23 (ENSSLDG00000013727)	CSTA (ENSSLDG00000013715)
Pleuronectoidei	ANCESTRAL SPECIES	12	ENSGT00940000156601	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826	ENSGT00940000167204
Tongue sole	MODERN SPECIES	13	ENSCSEG00000017945	slc35g2b (ENSCSEG00000017941)	ENSCSEG00000017930	ENSCSEG00000017925	csrnp1b (ENSCSEG00000017918)	slc22a13b (ENSCSEG00000017900)	ENSCSEG00000017880	oxsr1b (ENSCSEG00000017842)	myd88 (ENSCSEG00000017825)	cry-dash (ENSCSEG00000017812)	map3k22 (ENSCSEG00000017795)	ENSCSEG00000017769	plcd1a (ENSCSEG00000017745)	VILL (ENSCSEG00000017726)	ctdspla (ENSCSEG00000017706)	gars1 (ENSCSEG00000017671) #22	gars1 (ENSCSEG00000017654) #22	hhatlb (ENSCSEG00000017624)	klhl40b (ENSCSEG00000017613)	ZBTB47 (ENSCSEG00000017606)	ENSCSEG00000017601	NKTR (ENSCSEG00000017590)	SEC22C (ENSCSEG00000017579)	vipr1b (ENSCSEG00000017555)	ENSCSEG00000017172	ENSCSEG00000017163	ENSCSEG00000017157	ENSCSEG00000017149	GRAMD1C (ENSCSEG00000017113)	zdhhc23b (ENSCSEG00000017103)	ccdc191 (ENSCSEG00000017076)
Turbot	MODERN SPECIES	13	ENSSMAG00000012993	slc35g2b (ENSSMAG00000013109)	ENSSMAG00000013117	ENSSMAG00000013128	csrnp1b (ENSSMAG00000033284)	ENSSMAG00000013156	slc22a13b (ENSSMAG00000013217)	oxsr1b (ENSSMAG00000013230)	myd88 (ENSSMAG00000013300)	cry-dash (ENSSMAG00000013314)	map3k22 (ENSSMAG00000013366)	ENSSMAG00000013429	plcd1a (ENSSMAG00000013515)	VILL (ENSSMAG00000013594)	ctdspla (ENSSMAG00000025140)	gars1 (ENSSMAG00000013672) #22	gars1 (ENSSMAG00000013709) #22	hhatlb (ENSSMAG00000013753)	klhl40b (ENSSMAG00000013798)	ZBTB47 (ENSSMAG00000013773)	NKTR (ENSSMAG00000013802)	SEC22C (ENSSMAG00000013834)	vipr1b (ENSSMAG00000013845)	ENSSMAG00000013880	ENSSMAG00000013915	ENSSMAG00000013918	ENSSMAG00000013952	ENSSMAG00000022461	ENSSMAG00000033833	drd3 (ENSSMAG00000013993)	qtrt2 (ENSSMAG00000014011)
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000153759.a.a.g #22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000153759.a.a.g #22
Huchen	MODERN SPECIES	3786															ENSHHUG00000042334	gars1 (ENSHHUG00000042338) #22	ENSHHUG00000042351	ENSHHUG00000042362
Salmoninae_a	ANCESTRAL SPECIES	32													ENSGT00390000011053	ENSGT00640000091497.a	ENSGT00940000158548	ENSGT00940000153759.a.a.g #22	ENSGT00940000158392.e.b.d	ENSGT00390000006098	ENSGT01030000234626.C	ENSGT00940000165167	ENSGT00940000154607.b.a.s.a.a	ENSGT00530000063779.B.b	ENSGT00950000183072.a.a.a.d	ENSGT00390000008686.c.d	ENSGT00940000153249.b.d.b	ENSGT00940000156601.u	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b.d	ENSGT00940000160269.g.a
Salmo	ANCESTRAL SPECIES	67													ENSGT00390000011053	ENSGT00640000091497.a	ENSGT00940000158548	ENSGT00940000153759.a.a.g #22	ENSGT00940000158392.e.b.d	ENSGT00390000006098	ENSGT01030000234626.C	ENSGT00940000165167	ENSGT00940000154607.b.a.s.b	ENSGT00530000063779.B.b	ENSGT00950000183072.a.a.a.d	ENSGT00390000008686.c.d	ENSGT00940000156601.u.a	ENSGT00940000156929	ENSGT00940000154674.q.b	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b.d	ENSGT00940000160269.g.a	ENSGT00940000154200.B.r
River trout	MODERN SPECIES	235															ENSSTUG00000042922	gars1 (ENSSTUG00000041781) #22	ENSSTUG00000041760	plcd1a (ENSSTUG00000041105)
Atlantic salmon	MODERN SPECIES	10													mix23 (ENSSSAG00000045678)	ENSSSAG00000081963	ENSSSAG00000053230	gars (ENSSSAG00000045811) #22	ENSSSAG00000083683	plcd1a (ENSSSAG00000111220)	ENSSSAG00000085672	ENSSSAG00000045522	acaa1 (ENSSSAG00000121911)	cry-dash (ENSSSAG00000045219)	slc22a13b (ENSSSAG00000116575)	ENSSSAG00000121424	ENSSSAG00000054598	ENSSSAG00000075501	slc35g2b (ENSSSAG00000109757)	ENSSSAG00000085614	bdh1 (ENSSSAG00000097728)	gyg1b (ENSSSAG00000045396)	AGTR1 (ENSSSAG00000066734)
Oncorhynchus	ANCESTRAL SPECIES	125													ENSGT00390000011053	ENSGT00640000091497.a	ENSGT00940000158548	ENSGT00940000153759.a.a.g #22	ENSGT00940000158392.e.b.d	ENSGT00390000006098	ENSGT01030000234626.C.cb	ENSGT00940000165167.b	ENSGT00940000154607.b.a.s.a.a	ENSGT00530000063779.B.b	ENSGT00950000183072.a.a.a.d	ENSGT00390000008686.c.d	ENSGT00940000153249.b.d.b	ENSGT00940000156601.t.a	ENSGT00940000156929	ENSGT00940000154674.q.b.f	ENSGT01050000244888.b.a.c.b.c
Oncorhynchus_a	ANCESTRAL SPECIES	168													ENSGT00390000011053	ENSGT00640000091497.a	ENSGT00940000158548	ENSGT00940000153759.a.a.g #22	ENSGT00940000158392.e.b.d	ENSGT00390000006098	ENSGT01030000234626.C.cb	ENSGT00940000165167.b	ENSGT00940000154607.b.a.s.a.a	ENSGT00530000063779.B.b	ENSGT00950000183072.a.a.a.d	ENSGT00390000008686.c.d	ENSGT00940000153249.b.d.b	ENSGT00940000156601.t.a	ENSGT00940000156929	ENSGT00940000154674.q.b.f	ENSGT01050000244888.b.a.c.b.c
Chinook salmon	MODERN SPECIES	31	inavab (ENSOTSG00005038554)	CYB5R1 (ENSOTSG00005038551)	adipor1a (ENSOTSG00005038528)	rabif (ENSOTSG00005038527)	kdm5ba (ENSOTSG00005038159)	ctsz (ENSOTSG00005038133)	npepl1 (ENSOTSG00005038131)	STX16 (ENSOTSG00005038129)	slc11a2 (ENSOTSG00005037833)	ENSOTSG00005037821	CTDSP2 (ENSOTSG00005037820)	avil (ENSOTSG00005032250)	TMBIM6 (ENSOTSG00005032216)	ENSOTSG00005032211	NCKAP5L (ENSOTSG00005032209)	gars1 (ENSOTSG00005030298) #22	tram1 (ENSOTSG00005030271)	dnajc3b (ENSOTSG00005030268)	coro6 (ENSOTSG00005030265)	ENSOTSG00005030263	ENSOTSG00005030262	nsrp1 (ENSOTSG00005030260)	ENSOTSG00005030236	ENSOTSG00005030235	ENSOTSG00005030224	ENSOTSG00005030223	ENSOTSG00005030218	ENSOTSG00005030217	RAB31 (ENSOTSG00005030216)	ENSOTSG00005030214	cdk2 (ENSOTSG00005030209)
Coho salmon	MODERN SPECIES	9	ENSOKIG00005043637	JPH1 (ENSOKIG00005043750)	ENSOKIG00005043813	gdap1 (ENSOKIG00005043934)	pi15a (ENSOKIG00005044074)	dipk2ab (ENSOKIG00005044122)	ENSOKIG00005044198	ENSOKIG00005044253	ENSOKIG00005045089	ENSOKIG00005046821	ENSOKIG00005046914	zic4 (ENSOKIG00005046960)	zic1 (ENSOKIG00005047030)	mix23 (ENSOKIG00005047083)	fam162a (ENSOKIG00005047172)	gars1 (ENSOKIG00005047535) #22	ENSOKIG00005048248	ENSOKIG00005048422	plcd1a (ENSOKIG00005049333)	ENSOKIG00005050798	acaa1 (ENSOKIG00005050841)	ENSOKIG00005050852	cry-dash (ENSOKIG00005050871)	slc22a13b (ENSOKIG00005050908)	ENSOKIG00005050920	ENSOKIG00005050931	GORASP1 (ENSOKIG00005050942)	slc35g2b (ENSOKIG00005050951)	ENSOKIG00005050954	bdh1 (ENSOKIG00005050971)	gyg1b (ENSOKIG00005050982)
Rainbow trout	MODERN SPECIES	2																ENSOMYG00000032082 #22	plcd1a (ENSOMYG00000032160)	ENSOMYG00000050640	acaa1 (ENSOMYG00000032320)	cry-dash (ENSOMYG00000032594)	ENSOMYG00000069127	SLC22A13 (ENSOMYG00000032606)	ENSOMYG00000048009	ENSOMYG00000032644	ENSOMYG00000076255	ENSOMYG00000051533	slc35g2b (ENSOMYG00000032638)	ENSOMYG00000032653	ENSOMYG00000070920	bdh1 (ENSOMYG00000032666)	gyg1b (ENSOMYG00000032717)
Northern pike	MODERN SPECIES	20	PTCHD1 (ENSELUG00000003320)	ENSELUG00000025216	ENSELUG00000000107	ENSELUG00000003375	cst14a.1 (ENSELUG00000000109)	ccdc58 (ENSELUG00000000112)	fam162a (ENSELUG00000003421)	KPNA1 (ENSELUG00000003462)	ENSELUG00000003494	vipr1b (ENSELUG00000003531)	SEC22C (ENSELUG00000003560)	NKTR (ENSELUG00000003616)	ENSELUG00000003643	klhl40b (ENSELUG00000003654)	hhatlb (ENSELUG00000003665)	gars1 (ENSELUG00000003692) #22	ENSELUG00000003703	VILL (ENSELUG00000003734)	plcd1a (ENSELUG00000003744)	ENSELUG00000003780	acaa1 (ENSELUG00000003809)	map3k22 (ENSELUG00000003835)	cry-dash (ENSELUG00000003858)	myd88 (ENSELUG00000003867)	oxsr1b (ENSELUG00000003874)	slc22a13b (ENSELUG00000003892)	ENSELUG00000003901	csrnp1b (ENSELUG00000003916)	ENSELUG00000003931	slc35g2b (ENSELUG00000003938)	NCK1 (ENSELUG00000003948)
Euteleosteomorpha	ANCESTRAL SPECIES	36	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000165845.c.b	ENSGT00940000154826	ENSGT00940000165845.c.a
Acanthomorphata	ANCESTRAL SPECIES	17	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000154607.b.a	ENSGT00940000158377.b.i.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT01040000240451.a.b.b.b	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000165845.c.a
Euacanthomorphacea	ANCESTRAL SPECIES	16	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT01040000240451.a.b.b.b	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826
Percomorphaceae	ANCESTRAL SPECIES	24	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826
Tiger tail seahorse	MODERN SPECIES	392	ENSHCOG00000004599	tm9sf1 (ENSHCOG00000004627)	ENSHCOG00000004642	fen1 (ENSHCOG00000004670)	pck2 (ENSHCOG00000004715)	psme1 (ENSHCOG00000004723)	dcaf11 (ENSHCOG00000004748)	thtpa (ENSHCOG00000004758)	ENSHCOG00000004785	ENSHCOG00000004804	ENSHCOG00000004834	plcd1a (ENSHCOG00000005161)	ENSHCOG00000005204	ctdspla (ENSHCOG00000005216)	gars1 (ENSHCOG00000005261) #22	gars1 (ENSHCOG00000005286) #22	hhatlb (ENSHCOG00000005307)	klhl40b (ENSHCOG00000000151)	NKTR (ENSHCOG00000005446)	SEC22C (ENSHCOG00000000177)	mos (ENSHCOG00000005477)	plag1 (ENSHCOG00000000577)	chchd7 (ENSHCOG00000000715)	ENSHCOG00000005752	ENSHCOG00000005787	ENSHCOG00000005791	plppr5b (ENSHCOG00000005808)	snx7 (ENSHCOG00000005816)	PPP1R3G (ENSHCOG00000005827)	LYRM4 (ENSHCOG00000005832)	fars2 (ENSHCOG00000005861)
Percomorphaceae_B	ANCESTRAL SPECIES	20	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167
Ovalentaria	ANCESTRAL SPECIES	21	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167	ENSGT00940000155717
Ovalentaria_B	ANCESTRAL SPECIES	20	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167	ENSGT00940000155717
Pomacentridae	ANCESTRAL SPECIES	11	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x.i	ENSGT00940000154607.b.a.x.j	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000165845.c.a
Pomacentridae_A	ANCESTRAL SPECIES	8	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x.i	ENSGT00940000154607.b.a.x.j	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000165845.c.a
Amphiprion	ANCESTRAL SPECIES	7	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x.i.b	ENSGT00940000154607.b.a.x.j	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000165845.c.a
Clown anemonefish	MODERN SPECIES	624					slc22a13b (ENSAOCG00000008663)	slc22a13b (ENSAOCG00000008680)	oxsr1b (ENSAOCG00000008689)	myd88 (ENSAOCG00000008695)	cry-dash (ENSAOCG00000008740)	map3k22 (ENSAOCG00000008802)	ENSAOCG00000008917	plcd1a (ENSAOCG00000008952)	VILL (ENSAOCG00000009004)	ctdspla (ENSAOCG00000009055)	gars1 (ENSAOCG00000009108) #22	gars1 (ENSAOCG00000002479) #22	hhatlb (ENSAOCG00000009176)	klhl40b (ENSAOCG00000009192)	ZBTB47 (ENSAOCG00000009222)	NKTR (ENSAOCG00000009242)	SEC22C (ENSAOCG00000009258)	vipr1b (ENSAOCG00000009372)	ENSAOCG00000001812	ENSAOCG00000009412	ENSAOCG00000009429	KPNA1 (ENSAOCG00000009438)	fam162a (ENSAOCG00000009455)	mix23 (ENSAOCG00000000582)	CSTA (ENSAOCG00000009607)	CSTA (ENSAOCG00000009622)	cst14a.1 (ENSAOCG00000009630)
Orange clownfish	MODERN SPECIES	14	ENSAPEG00000017326	slc22a13b (ENSAPEG00000017348)	LIMD2 (ENSAPEG00000017411)	slc22a13b (ENSAPEG00000017432)	slc22a13b (ENSAPEG00000017544)	slc22a13b (ENSAPEG00000017576)	oxsr1b (ENSAPEG00000017631)	myd88 (ENSAPEG00000017990)	cry-dash (ENSAPEG00000017999)	map3k22 (ENSAPEG00000018071)	ENSAPEG00000018173	plcd1a (ENSAPEG00000018217)	VILL (ENSAPEG00000018324)	ctdspla (ENSAPEG00000018781)	gars1 (ENSAPEG00000018850) #22	gars1 (ENSAPEG00000018903) #22	hhatlb (ENSAPEG00000018958)	klhl40b (ENSAPEG00000018984)	ZBTB47 (ENSAPEG00000018994)	NKTR (ENSAPEG00000019031)	SEC22C (ENSAPEG00000019042)	vipr1b (ENSAPEG00000019050)	ENSAPEG00000019100	ENSAPEG00000019117	ENSAPEG00000019139	KPNA1 (ENSAPEG00000019153)	fam162a (ENSAPEG00000019169)	mix23 (ENSAPEG00000019188)	CSTA (ENSAPEG00000019211)	cst14a.1 (ENSAPEG00000019223)	ENSAPEG00000019238
Spiny chromis	MODERN SPECIES	960											ENSAPOG00000019710	plcd1a (ENSAPOG00000019733)	VILL (ENSAPOG00000019845)	ctdspla (ENSAPOG00000019906)	gars1 (ENSAPOG00000019999) #22	gars1 (ENSAPOG00000020089) #22	hhatlb (ENSAPOG00000020135)	klhl40b (ENSAPOG00000000572)	ZBTB47 (ENSAPOG00000020173)	NKTR (ENSAPOG00000020183)	SEC22C (ENSAPOG00000020189)	vipr1b (ENSAPOG00000020198)	ENSAPOG00000020215	ENSAPOG00000020259	NANOS2 (ENSAPOG00000020274)	KPNA1 (ENSAPOG00000020345)	fam162a (ENSAPOG00000020359)	mix23 (ENSAPOG00000020382)	ENSAPOG00000020387
Bicolor damselfish	MODERN SPECIES	60																gars1 (ENSSPAG00000011882) #22	hhatlb (ENSSPAG00000011862)	klhl40b (ENSSPAG00000011848)	ZBTB47 (ENSSPAG00000011821)	NKTR (ENSSPAG00000011792)	SEC22C (ENSSPAG00000011775)
Cichlidae	ANCESTRAL SPECIES	18	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167	ENSGT00940000155717
Pseudocrenilabrinae	ANCESTRAL SPECIES	20	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826.n	ENSGT00940000155717
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	19	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826.n	ENSGT00940000155717
Haplochromini	ANCESTRAL SPECIES	21	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a.m.b	ENSGT00530000064862	ENSGT00950000183135.A.a.n	ENSGT00950000183135.A.a.m.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053
Burton s mouthbrooder	MODERN SPECIES	270	slc35g2b (ENSHBUG00000016099)	ENSHBUG00000016120	ENSHBUG00000016133	csrnp1b (ENSHBUG00000016137)	ENSHBUG00000016141	slc22a13b (ENSHBUG00000016149)	oxsr1b (ENSHBUG00000016177)	myd88 (ENSHBUG00000016188)	cry-dash (ENSHBUG00000016224)	map3k22 (ENSHBUG00000016292)	ENSHBUG00000016318	plcd1a (ENSHBUG00000016342)	VILL (ENSHBUG00000016379)	ctdspla (ENSHBUG00000016416)	gars1 (ENSHBUG00000016481) #22	gars1 (ENSHBUG00000000815) #22	hhatlb (ENSHBUG00000016582)	klhl40b (ENSHBUG00000016591)	ZBTB47 (ENSHBUG00000016619)	NKTR (ENSHBUG00000016643)	SEC22C (ENSHBUG00000016657)	vipr1b (ENSHBUG00000016702)	ENSHBUG00000016727	ENSHBUG00000016758	NANOS2 (ENSHBUG00000016772)	KPNA1 (ENSHBUG00000016841)	fam162a (ENSHBUG00000016866)	mix23 (ENSHBUG00000016889)	CSTA (ENSHBUG00000016899)	ENSHBUG00000016964	CSTA (ENSHBUG00000016985)
Haplochromini_A	ANCESTRAL SPECIES	21	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180167	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a.m.b	ENSGT00530000064862	ENSGT00950000183135.A.a.n	ENSGT00950000183135.A.a.m.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a
P. nyererei	MODERN SPECIES	302	ENSPNYG00000005785	ENSPNYG00000005770	csrnp1b (ENSPNYG00000005761)	ENSPNYG00000005672	LIMD2 (ENSPNYG00000005661)	slc22a13b (ENSPNYG00000005647)	oxsr1b (ENSPNYG00000005631)	myd88 (ENSPNYG00000005613)	cry-dash (ENSPNYG00000005507)	map3k22 (ENSPNYG00000005481)	ENSPNYG00000005356	plcd1a (ENSPNYG00000005315)	VILL (ENSPNYG00000005168)	ctdspla (ENSPNYG00000005093)	gars1 (ENSPNYG00000005017) #22	gars1 (ENSPNYG00000004960) #22	hhatlb (ENSPNYG00000004749)	klhl40b (ENSPNYG00000004694)	ZBTB47 (ENSPNYG00000004668)	ENSPNYG00000004653	ENSPNYG00000004639	ENSPNYG00000004629	SEC22C (ENSPNYG00000004619)	vipr1b (ENSPNYG00000004580)	ENSPNYG00000004558	NANOS2 (ENSPNYG00000004545)	KPNA1 (ENSPNYG00000004500)	fam162a (ENSPNYG00000004485)	mix23 (ENSPNYG00000004466)	ENSPNYG00000004449	ENSPNYG00000004428
Haplochromini_B	ANCESTRAL SPECIES	18	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180167	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a.m.b	ENSGT00950000183135.A.a.m.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826.n
Eastern happy	MODERN SPECIES	21	slc35g2b (ENSACLG00000027351)	ENSACLG00000027345	ENSACLG00000027340	csrnp1b (ENSACLG00000027338)	ENSACLG00000027332	slc22a13b (ENSACLG00000027330)	oxsr1b (ENSACLG00000027322)	myd88 (ENSACLG00000027319)	cry-dash (ENSACLG00000027299)	map3k22 (ENSACLG00000027280)	ENSACLG00000027269	plcd1a (ENSACLG00000027250)	VILL (ENSACLG00000027218)	ctdspla (ENSACLG00000027198)	gars1 (ENSACLG00000027174) #22	gars1 (ENSACLG00000027158) #22	hhatlb (ENSACLG00000027110)	klhl40b (ENSACLG00000027102)	ENSACLG00000027100	ZBTB47 (ENSACLG00000027087)	NKTR (ENSACLG00000027075)	SEC22C (ENSACLG00000027069)	vipr1b (ENSACLG00000027040)	ENSACLG00000027014	NANOS2 (ENSACLG00000027005)	KPNA1 (ENSACLG00000026976)	fam162a (ENSACLG00000026973)	mix23 (ENSACLG00000026966)	ENSACLG00000026963	ENSACLG00000026960	CSTA (ENSACLG00000026957)
Zebra mbuna	MODERN SPECIES	1112	ENSMZEG00005017718	ENSMZEG00005017737	csrnp1b (ENSMZEG00005019565)	ENSMZEG00005019573	LIMD2 (ENSMZEG00005019576)	slc22a13b (ENSMZEG00005019580)	oxsr1b (ENSMZEG00005019587)	myd88 (ENSMZEG00005019596)	cry-dash (ENSMZEG00005019606)	map3k22 (ENSMZEG00005019623)	DLEC1 (ENSMZEG00005019661)	plcd1a (ENSMZEG00005019702)	VILL (ENSMZEG00005019707)	ctdspla (ENSMZEG00005019717)	gars1 (ENSMZEG00005019740) #22	gars1 (ENSMZEG00005019754) #22	hhatlb (ENSMZEG00005019764)	klhl40b (ENSMZEG00005019769)	ZBTB47 (ENSMZEG00005019770)	ENSMZEG00005019775	ENSMZEG00005019777	ENSMZEG00005019781	SEC22C (ENSMZEG00005019783)	vipr1b (ENSMZEG00005019790)	ENSMZEG00005019800	plod2 (ENSMZEG00005019823)	dipk2ab (ENSMZEG00005021968)	SLC9A9 (ENSMZEG00005021971)	CHST2 (ENSMZEG00005021974)	trpc1 (ENSMZEG00005021979)	pcolce2b (ENSMZEG00005021986)
Lyretail cichlid	MODERN SPECIES	325	slc35g2b (ENSNBRG00000017545)	GORASP1 (ENSNBRG00000017567)	ENSNBRG00000017652	csrnp1b (ENSNBRG00000017756)	LIMD2 (ENSNBRG00000017764)	slc22a13b (ENSNBRG00000017787)	oxsr1b (ENSNBRG00000017887)	myd88 (ENSNBRG00000018166)	cry-dash (ENSNBRG00000018178)	map3k22 (ENSNBRG00000018214)	DLEC1 (ENSNBRG00000018276)	plcd1a (ENSNBRG00000018469)	VILL (ENSNBRG00000018493)	ctdspla (ENSNBRG00000018557)	gars1 (ENSNBRG00000018585) #22	gars1 (ENSNBRG00000018643) #22	hhatlb (ENSNBRG00000018666)	klhl40b (ENSNBRG00000018706)	ZBTB47 (ENSNBRG00000018718)	ENSNBRG00000018751	ENSNBRG00000018760	SEC22C (ENSNBRG00000018770)	vipr1b (ENSNBRG00000018796)	NANOS2 (ENSNBRG00000018838)	KPNA1 (ENSNBRG00000018864)	fam162a (ENSNBRG00000018901)	mix23 (ENSNBRG00000018934)
Nile tilapia	MODERN SPECIES	21	GORASP1 (ENSONIG00000034188)	ENSONIG00000005850	csrnp1b (ENSONIG00000005849)	ENSONIG00000039012	slc22a13b (ENSONIG00000031310)	slc22a13b (ENSONIG00000038660)	slc22a13b (ENSONIG00000005842)	oxsr1b (ENSONIG00000029738)	myd88 (ENSONIG00000005835)	cry-dash (ENSONIG00000005833)	map3k22 (ENSONIG00000005831)	ENSONIG00000005829	plcd1a (ENSONIG00000005823)	VILL (ENSONIG00000005814)	ctdspl (ENSONIG00000005811)	gars1 (ENSONIG00000005805) #22	hhatlb (ENSONIG00000005799)	klhl40b (ENSONIG00000005798)	ZBTB47 (ENSONIG00000005797)	NKTR (ENSONIG00000005793)	sec22c (ENSONIG00000038081)	vipr1b (ENSONIG00000005778)	ENSONIG00000042031	NANOS2 (ENSONIG00000005777)	KPNA1 (ENSONIG00000005775)	fam162a (ENSONIG00000031989)	mix23 (ENSONIG00000005769)	CSTA (ENSONIG00000005767)	ENSONIG00000037274	ENSONIG00000041403	ENSONIG00000038343
Midas cichlid	MODERN SPECIES	363	ENSACIG00000019027	ENSACIG00000019129	csrnp1b (ENSACIG00000019328)	LIMD2 (ENSACIG00000019348)	slc22a13b (ENSACIG00000019358)	ENSACIG00000019372	oxsr1b (ENSACIG00000019381)	myd88 (ENSACIG00000019425)	cry-dash (ENSACIG00000020287)	map3k22 (ENSACIG00000020310)	DLEC1 (ENSACIG00000020341)	plcd1a (ENSACIG00000020428)	VILL (ENSACIG00000020649)	ctdspla (ENSACIG00000020718)	gars1 (ENSACIG00000020744) #22	gars1 (ENSACIG00000020797) #22	hhatlb (ENSACIG00000020837)	klhl40b (ENSACIG00000020870)	ZBTB47 (ENSACIG00000020938)	ENSACIG00000020947	NKTR (ENSACIG00000020974)	SEC22C (ENSACIG00000021088)	vipr1b (ENSACIG00000021119)	ENSACIG00000021188	ENSACIG00000021212	KPNA1 (ENSACIG00000021218)	fam162a (ENSACIG00000021239)	mix23 (ENSACIG00000021272)	CSTA (ENSACIG00000021286)	cst14b.1 (ENSACIG00000021383)	ENSACIG00000021429
Percomorphaceae_C	ANCESTRAL SPECIES	21	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167
Eupercaria	ANCESTRAL SPECIES	20	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167	ENSGT00940000155717
Eupecaria_A	ANCESTRAL SPECIES	19	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167	ENSGT00940000155717
Eupecaria_B	ANCESTRAL SPECIES	19	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01030000235167	ENSGT00940000155717
Perciformes	ANCESTRAL SPECIES	21	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826	ENSGT00940000165845.c.a
Cottioidei	ANCESTRAL SPECIES	21	ENSGT00940000156601	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000173926	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826	ENSGT00940000165845.c.a
Lumpfish	MODERN SPECIES	12	NCK1 (ENSCLMG00005019650)	slc35g2b (ENSCLMG00005019651)	GORASP1 (ENSCLMG00005019652)	csrnp1b (ENSCLMG00005019653)	LIMD2 (ENSCLMG00005019654)	slc22a13b (ENSCLMG00005019655)	oxsr1b (ENSCLMG00005019657)	myd88 (ENSCLMG00005019955)	cry-dash (ENSCLMG00005019957)	map3k22 (ENSCLMG00005019958)	ENSCLMG00005019980	plcd1a (ENSCLMG00005019985)	VILL (ENSCLMG00005020150)	ctdspla (ENSCLMG00005020915)	GARS1 (ENSCLMG00005020930) #22	gars1 (ENSCLMG00005020933) #22	GARS1 (ENSCLMG00005020940) #22	hhatlb (ENSCLMG00005020945)	klhl40b (ENSCLMG00005020947)	ZBTB47 (ENSCLMG00005020950)	ENSCLMG00005020953	ENSCLMG00005020956	ENSCLMG00005020958	SEC22C (ENSCLMG00005020960)	vipr1b (ENSCLMG00005020966)	ENSCLMG00005020974	NANOS2 (ENSCLMG00005020979)	KPNA1 (ENSCLMG00005020984)	fam162a (ENSCLMG00005021184)	mix23 (ENSCLMG00005021185)	cst14a.1 (ENSCLMG00005021187)
Perciformes_a	ANCESTRAL SPECIES	22	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.x	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT01100000266426	ENSGT00940000154826	ENSGT00940000165845.c.a
Pike perch	MODERN SPECIES	58						ENSSLUG00000010978	slc22a13b (ENSSLUG00000010983)	oxsr1b (ENSSLUG00000011056)	cry-dash (ENSSLUG00000012433)	map3k22 (ENSSLUG00000012508)	ENSSLUG00000012539	plcd1a (ENSSLUG00000012575)	VILL (ENSSLUG00000013110)	ctdspla (ENSSLUG00000013890)	gars1 (ENSSLUG00000013974) #22	gars1 (ENSSLUG00000014117) #22	hhatlb (ENSSLUG00000014152)	klhl40b (ENSSLUG00000014157)	ZBTB47 (ENSSLUG00000014162)	ENSSLUG00000014168	NKTR (ENSSLUG00000014174)	SEC22C (ENSSLUG00000014183)	vipr1b (ENSSLUG00000014191)	ENSSLUG00000014203	KPNA1 (ENSSLUG00000014243)	fam162a (ENSSLUG00000015431)	mix23 (ENSSLUG00000015445)	ENSSLUG00000015454	cst14a.1 (ENSSLUG00000015464)	ENSSLUG00000015478	drd3 (ENSSLUG00000015494)
Channel bull blenny	MODERN SPECIES	12	ENSCGOG00000020486	ENSCGOG00000020108	csrnp1b (ENSCGOG00000020095)	ENSCGOG00000020093	slc22a13b (ENSCGOG00000020087)	slc22a13b (ENSCGOG00000020082)	oxsr1b (ENSCGOG00000019330)	myd88 (ENSCGOG00000019275)	cry-dash (ENSCGOG00000019209)	map3k22 (ENSCGOG00000019186)	ENSCGOG00000019180	plcd1a (ENSCGOG00000017960)	VILL (ENSCGOG00000017429)	ctdspla (ENSCGOG00000017347)	gars1 (ENSCGOG00000016987) #22	gars1 (ENSCGOG00000016768) #22	hhatlb (ENSCGOG00000016762)	klhl40b (ENSCGOG00000016734)	ZBTB47 (ENSCGOG00000016728)	ENSCGOG00000016725	ENSCGOG00000016723	SEC22C (ENSCGOG00000016720)	ENSCGOG00000016718	vipr1b (ENSCGOG00000016685)	ENSCGOG00000016673	NANOS2 (ENSCGOG00000016672)	KPNA1 (ENSCGOG00000015140)	fam162a (ENSCGOG00000015106)	mix23 (ENSCGOG00000015090)	ENSCGOG00000015103	ENSCGOG00000015088
Eupecaria_C	ANCESTRAL SPECIES																	ENSGT00940000153759.a.a.h #22
Gilthead seabream	MODERN SPECIES	10	puf60b (ENSSAUG00010022582)	scrib (ENSSAUG00010020733)	KIF9 (ENSSAUG00010020685)	cdv3 (ENSSAUG00010020676)	ENSSAUG00010020673	topbp1 (ENSSAUG00010020657)	ENSSAUG00010020654	DNAJC13 (ENSSAUG00010020652)	lztfl1 (ENSSAUG00010020644)	CCR9 (ENSSAUG00010020640)	map3k22 (ENSSAUG00010020633)	ENSSAUG00010020632	plcd1a (ENSSAUG00010018908)	VILL (ENSSAUG00010015920)	ctdspla (ENSSAUG00010015831)	gars1 (ENSSAUG00010015304) #22	hhatlb (ENSSAUG00010015272)	klhl40b (ENSSAUG00010015271)	ZBTB47 (ENSSAUG00010015270)	NKTR (ENSSAUG00010015262)	SEC22C (ENSSAUG00010015252)	vipr1b (ENSSAUG00010014777)	ENSSAUG00010014755	ENSSAUG00010014749	NANOS2 (ENSSAUG00010014747)	KPNA1 (ENSSAUG00010014617)	fam162a (ENSSAUG00010014594)	mix23 (ENSSAUG00010014592)	ENSSAUG00010014590	ENSSAUG00010014586	ENSSAUG00010014585
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	8	ENSLBEG00000020860	eci2 (ENSLBEG00000020811)	inhbaa (ENSLBEG00000020777)	sugct (ENSLBEG00000020723)	acvr2ba (ENSLBEG00000020683)	slc22a13b (ENSLBEG00000020629)	oxsr1b (ENSLBEG00000020548)	myd88 (ENSLBEG00000020520)	cry-dash (ENSLBEG00000020418)	map3k22 (ENSLBEG00000020359)	ENSLBEG00000020148	plcd1a (ENSLBEG00000019642)	VILL (ENSLBEG00000019445)	ctdspla (ENSLBEG00000019361)	gars1 (ENSLBEG00000019228) #22	gars1 (ENSLBEG00000019179) #22	hhatlb (ENSLBEG00000019154)	klhl40b (ENSLBEG00000019133)	ZBTB47 (ENSLBEG00000019067)	ENSLBEG00000018999	ENSLBEG00000018967	SEC22C (ENSLBEG00000018955)	vipr1b (ENSLBEG00000018888)	ENSLBEG00000018847	NANOS2 (ENSLBEG00000018836)	KPNA1 (ENSLBEG00000018793)	fam162a (ENSLBEG00000018775)	mix23 (ENSLBEG00000018746)	ENSLBEG00000018723	ENSLBEG00000018704	drd3 (ENSLBEG00000018697)
Ballan wrasse	MODERN SPECIES	3521																gars1 (ENSLBEG00000013122) #22	ENSLBEG00000013148
Percomorphaceae_D	ANCESTRAL SPECIES	21	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826
Carangaria	ANCESTRAL SPECIES	21	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826
Carangaria_A	ANCESTRAL SPECIES	15	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000180074	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717	ENSGT00940000154826	ENSGT00940000165845.c.a
Seriola	ANCESTRAL SPECIES	27	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.b	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324.e	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00390000006098	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000155717.gb	ENSGT01100000263504.a.b.b.b.b.x.a	ENSGT00950000183089.c.a.k.a.l
Greater amberjack	MODERN SPECIES	33	ENSSDUG00000017316	csrnp1b (ENSSDUG00000017297)	ENSSDUG00000017284	LIMD2 (ENSSDUG00000017271)	slc22a13b (ENSSDUG00000017234)	oxsr1b (ENSSDUG00000017205)	myd88 (ENSSDUG00000017195)	myd88 (ENSSDUG00000017117)	cry-dash (ENSSDUG00000017085)	map3k22 (ENSSDUG00000017055)	ENSSDUG00000016997	plcd1a (ENSSDUG00000016936)	VILL (ENSSDUG00000016897)	ctdspla (ENSSDUG00000016863)	gars1 (ENSSDUG00000016795) #22	gars1 (ENSSDUG00000016758) #22	hhatlb (ENSSDUG00000016725)	klhl40b (ENSSDUG00000016716)	ZBTB47 (ENSSDUG00000016704)	NKTR (ENSSDUG00000016685)	SEC22C (ENSSDUG00000016667)	vipr1b (ENSSDUG00000016631)	ENSSDUG00000016585	NANOS2 (ENSSDUG00000016576)	KPNA1 (ENSSDUG00000016540)	fam162a (ENSSDUG00000016523)	mix23 (ENSSDUG00000016509)	CSTA (ENSSDUG00000016479)	ENSSDUG00000016419	ENSSDUG00000016402	H2BC11 (ENSSDUG00000016389)
Yellowtail amberjack	MODERN SPECIES	2777	slc35g2b (ENSSLDG00000014934)	ENSSLDG00000014921	ENSSLDG00000014817	csrnp1b (ENSSLDG00000014777)	ENSSLDG00000014762	slc22a13b (ENSSLDG00000014743)	oxsr1b (ENSSLDG00000014715)	myd88 (ENSSLDG00000014687)	cry-dash (ENSSLDG00000014646)	map3k22 (ENSSLDG00000014577)	ENSSLDG00000014533	plcd1a (ENSSLDG00000014485)	VILL (ENSSLDG00000014393)	ctdspla (ENSSLDG00000014337)	gars1 (ENSSLDG00000014279) #22	gars1 (ENSSLDG00000014238) #22	hhatlb (ENSSLDG00000014204)	klhl40b (ENSSLDG00000014189)	ZBTB47 (ENSSLDG00000014177)	NKTR (ENSSLDG00000013986)	SEC22C (ENSSLDG00000013929)	vipr1b (ENSSLDG00000013889)	ENSSLDG00000013842	ENSSLDG00000013821	ENSSLDG00000013805	NANOS2 (ENSSLDG00000013795)	KPNA1 (ENSSLDG00000013759)	fam162a (ENSSLDG00000013742)	mix23 (ENSSLDG00000013727)	CSTA (ENSSLDG00000013715)	ENSSLDG00000013671
Barramundi perch	MODERN SPECIES	47	slc35g2b (ENSLCAG00010010143)	GORASP1 (ENSLCAG00010010146)	ENSLCAG00010010147	csrnp1b (ENSLCAG00010010149)	ENSLCAG00010010152	slc22a13b (ENSLCAG00010010153)	oxsr1b (ENSLCAG00010010190)	myd88 (ENSLCAG00010010397)	cry-dash (ENSLCAG00010010408)	map3k22 (ENSLCAG00010010410)	DLEC1 (ENSLCAG00010010418)	plcd1a (ENSLCAG00010010456)	VILL (ENSLCAG00010010531)	ctdspla (ENSLCAG00010010554)	gars1 (ENSLCAG00010010591) #22	gars1 (ENSLCAG00010010713) #22	hhatlb (ENSLCAG00010010729)	klhl40b (ENSLCAG00010010734)	ZBTB47 (ENSLCAG00010010737)	ENSLCAG00010010741	ENSLCAG00010010743	NKTR (ENSLCAG00010010746)	SEC22C (ENSLCAG00010010749)	vipr1b (ENSLCAG00010010756)	ENSLCAG00010010772	NANOS2 (ENSLCAG00010010773)	KPNA1 (ENSLCAG00010010939)	fam162a (ENSLCAG00010011984)	mix23 (ENSLCAG00010011990)	CSTA (ENSLCAG00010012000)	ENSLCAG00010012002
Pleuronectoidei	ANCESTRAL SPECIES	12	ENSGT00940000153249.b.d.b	ENSGT00390000008686.c.d	ENSGT01030000234528.B.b.a.a.b	ENSGT00950000183072.a.a.a	ENSGT00940000158377.b.i.a	ENSGT00940000154607.b.a.w	ENSGT00940000154621.a.b.b.a	ENSGT00510000048324	ENSGT00940000165167	ENSGT00940000164858	ENSGT00940000165361	ENSGT00940000158392.e.b	ENSGT00940000160253	ENSGT01040000240451.a.b.b.a.b	ENSGT00940000153759.a.a.g #22	ENSGT00940000153759.a.a.h #22	ENSGT00530000063629.b.c	ENSGT00940000156360.c	ENSGT00940000160089	ENSGT00940000158548	ENSGT00940000159338	ENSGT00940000156402.B	ENSGT00940000168651	ENSGT00530000064862	ENSGT00950000183135.A.a	ENSGT01050000244950.a.a.a	ENSGT00640000091497.a	ENSGT00390000011053	ENSGT00940000154826	ENSGT00940000167204	ENSGT00940000159661
Turbot	MODERN SPECIES	13	slc35g2b (ENSSMAG00000013109)	ENSSMAG00000013117	ENSSMAG00000013128	csrnp1b (ENSSMAG00000033284)	ENSSMAG00000013156	slc22a13b (ENSSMAG00000013217)	oxsr1b (ENSSMAG00000013230)	myd88 (ENSSMAG00000013300)	cry-dash (ENSSMAG00000013314)	map3k22 (ENSSMAG00000013366)	ENSSMAG00000013429	plcd1a (ENSSMAG00000013515)	VILL (ENSSMAG00000013594)	ctdspla (ENSSMAG00000025140)	gars1 (ENSSMAG00000013672) #22	gars1 (ENSSMAG00000013709) #22	hhatlb (ENSSMAG00000013753)	klhl40b (ENSSMAG00000013798)	ZBTB47 (ENSSMAG00000013773)	NKTR (ENSSMAG00000013802)	SEC22C (ENSSMAG00000013834)	vipr1b (ENSSMAG00000013845)	ENSSMAG00000013880	ENSSMAG00000013915	ENSSMAG00000013918	ENSSMAG00000013952	ENSSMAG00000022461	ENSSMAG00000033833	drd3 (ENSSMAG00000013993)	qtrt2 (ENSSMAG00000014011)	ccdc191 (ENSSMAG00000014055)
Tongue sole	MODERN SPECIES	13	slc35g2b (ENSCSEG00000017941)	ENSCSEG00000017930	ENSCSEG00000017925	csrnp1b (ENSCSEG00000017918)	slc22a13b (ENSCSEG00000017900)	ENSCSEG00000017880	oxsr1b (ENSCSEG00000017842)	myd88 (ENSCSEG00000017825)	cry-dash (ENSCSEG00000017812)	map3k22 (ENSCSEG00000017795)	ENSCSEG00000017769	plcd1a (ENSCSEG00000017745)	VILL (ENSCSEG00000017726)	ctdspla (ENSCSEG00000017706)	gars1 (ENSCSEG00000017671) #22	gars1 (ENSCSEG00000017654) #22	hhatlb (ENSCSEG00000017624)	klhl40b (ENSCSEG00000017613)	ZBTB47 (ENSCSEG00000017606)	ENSCSEG00000017601	NKTR (ENSCSEG00000017590)	SEC22C (ENSCSEG00000017579)	vipr1b (ENSCSEG00000017555)	ENSCSEG00000017172	ENSCSEG00000017163	ENSCSEG00000017157	ENSCSEG00000017149	GRAMD1C (ENSCSEG00000017113)	zdhhc23b (ENSCSEG00000017103)	ccdc191 (ENSCSEG00000017076)	qtrt2 (ENSCSEG00000017068)
Pinecone sodierfish	MODERN SPECIES	12	slc22a13b (ENSMMDG00005014867)	slc22a13b (ENSMMDG00005014874)	slc22a13b (ENSMMDG00005014877)	slc22a13b (ENSMMDG00005014881)	slc22a13b (ENSMMDG00005014892)	oxsr1b (ENSMMDG00005014929)	myd88 (ENSMMDG00005017199)	cry-dash (ENSMMDG00005017204)	map3k22 (ENSMMDG00005017227)	acaa1 (ENSMMDG00005017256)	ENSMMDG00005017458	plcd1a (ENSMMDG00005017481)	VILL (ENSMMDG00005019207)	ctdspla (ENSMMDG00005019283)	gars1 (ENSMMDG00005019314) #22	gars1 (ENSMMDG00005019326) #22	hhatlb (ENSMMDG00005019331)	klhl40b (ENSMMDG00005019336)	ZBTB47 (ENSMMDG00005019346)	ENSMMDG00005019347	NKTR (ENSMMDG00005002506)	SEC22C (ENSMMDG00005002514)	vipr1b (ENSMMDG00005002519)	ENSMMDG00005002534	NANOS2 (ENSMMDG00005002544)	KPNA1 (ENSMMDG00005002653)	fam162a (ENSMMDG00005004037)	mix23 (ENSMMDG00005004048)	cst14a.1 (ENSMMDG00005004058)	ENSMMDG00005004071	drd3 (ENSMMDG00005004131)
Osteoglossiformes	ANCESTRAL SPECIES	218	ENSGT00940000165403	ENSGT00940000159301.b	ENSGT00940000161049	ENSGT00940000156210.c	ENSGT00940000154992.a.a.e	ENSGT01100000264618	ENSGT00920000149157	ENSGT00390000008686.c.c	ENSGT00950000183072.a.a.a	ENSGT00530000063779.B.a	ENSGT00940000158377.b.i.b	ENSGT00940000154607.b.b	ENSGT00940000154621.a.b.b.b	ENSGT00940000158392.e.a	ENSGT01040000240451.a.b.b.a.a	ENSGT00940000153759.a.a #22	ENSGT00530000063629.b.c.d	ENSGT00940000156360.d	ENSGT00940000160089	ENSGT00940000166630	ENSGT00940000155240.B.a
Asian bonytongue	MODERN SPECIES	22	ENSSFOG00015023790	ENSSFOG00015024720	WDR86 (ENSSFOG00015023794)	ACVR2B (ENSSFOG00015023798)	scn12aa (ENSSFOG00015023802)	ENSSFOG00015030878	wdr48b (ENSSFOG00015023810)	gorasp1a (ENSSFOG00015023816)	csrnp1b (ENSSFOG00015024752)	xirp1 (ENSSFOG00015023838)	ENSSFOG00015000129	oxsr1a (ENSSFOG00015000285)	map3k22 (ENSSFOG00015000353)	plcd1b (ENSSFOG00015000439)	ctdsplb (ENSSFOG00015031497)	gars1 (ENSSFOG00015000573) #22	hhatlb (ENSSFOG00015000659)	klhl40a (ENSSFOG00015000707)	ZBTB47 (ENSSFOG00015000715)	ENSSFOG00015027123	ENSSFOG00015000750	msrb2 (ENSSFOG00015000831)	PIP4K2A (ENSSFOG00015000860)	bmi1b (ENSSFOG00015000905)	dnajc1 (ENSSFOG00015000954)	MLLT10 (ENSSFOG00015000983)	SKIDA1 (ENSSFOG00015026124)	nebl (ENSSFOG00015001008)	riok1 (ENSSFOG00015001035)	SSR1 (ENSSFOG00015001090)	RREB1 (ENSSFOG00015024660)
P. kingsleyae	MODERN SPECIES	199	WDR86 (ENSPKIG00000014071)	ACVR2B (ENSPKIG00000014125)	scn12aa (ENSPKIG00000014181)	ENSPKIG00000014233	wdr48b (ENSPKIG00000014276)	gorasp1a (ENSPKIG00000014356)	csrnp1b (ENSPKIG00000014397)	xirp1 (ENSPKIG00000014417)	ENSPKIG00000014432	ENSPKIG00000014445	oxsr1a (ENSPKIG00000014520)	ENSPKIG00000014658	ENSPKIG00000014673	plcd1b (ENSPKIG00000014704)	ctdsplb (ENSPKIG00000014795)	gars1 (ENSPKIG00000014863) #22	HHATL (ENSPKIG00000014930)	klhl40a (ENSPKIG00000015009)	ENSPKIG00000015049	ENSPKIG00000015105
Spotted gar	MODERN SPECIES	675	ENSLOCG00000009870	csrnp1b (ENSLOCG00000009861)	xirp1 (ENSLOCG00000009850)	ENSLOCG00000009841	slc22a13b (ENSLOCG00000009828)	oxsr1a (ENSLOCG00000009820)	myd88 (ENSLOCG00000009811)	cry-dash (ENSLOCG00000009796)	map3k22 (ENSLOCG00000009780)	acaa1 (ENSLOCG00000009768)	DLEC1 (ENSLOCG00000009757)	ENSLOCG00000009753	plcd1a (ENSLOCG00000009737)	VILL (ENSLOCG00000009718)	ctdsplb (ENSLOCG00000009706)	gars1 (ENSLOCG00000009688) #22	hhatlb (ENSLOCG00000009668)	klhl40b (ENSLOCG00000009659)	ENSLOCG00000009647	NKTR (ENSLOCG00000009632)	SEC22C (ENSLOCG00000009619)	vipr1b (ENSLOCG00000009610)	ENSLOCG00000009604	ENSLOCG00000009570	adcyap1r1a (ENSLOCG00000009545) #27	GHRHR (ENSLOCG00000009533) #26	aqp1a.1 (ENSLOCG00000009523) #25	MINDY4 (ENSLOCG00000009519) #24	ENSLOCG00000018130	CRHR2 (ENSLOCG00000009503) #23	myl13 (ENSLOCG00000009496)
Reedfish	MODERN SPECIES	14	ENSECRG00000011186	ENSECRG00000011182	ENSECRG00000011179	ENSECRG00000011177	ENSECRG00000011173	ENSECRG00000011166	nrbp2b (ENSECRG00000011150)	puf60b (ENSECRG00000011132)	scrib (ENSECRG00000011052)	KIF9 (ENSECRG00000010418)	DLEC1 (ENSECRG00000010253)	plcd1a (ENSECRG00000009825)	VILL (ENSECRG00000009711)	ctdsplb (ENSECRG00000009666)	ENSECRG00000009652	gars1 (ENSECRG00000009603) #22	hhatlb (ENSECRG00000009582)	klhl40b (ENSECRG00000009560)	ENSECRG00000009535	NKTR (ENSECRG00000009505)	SEC22C (ENSECRG00000009467)	vipr1b (ENSECRG00000009447)	ENSECRG00000009434	adcyap1r1a (ENSECRG00000009417) #27	GHRHR (ENSECRG00000009366) #26	aqp1a.1 (ENSECRG00000009348) #25	MINDY4 (ENSECRG00000009334) #24	CRHR2 (ENSECRG00000009276) #23	myl13 (ENSECRG00000009254)	pth1r (ENSECRG00000009151)	tmie (ENSECRG00000009115)
Elephant shark	MODERN SPECIES	2031																gars1 (ENSCMIG00000006520) #22
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000153759.a.a #22
Hagfish	DUPLICATION
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	1306													ENSEBUG00000009517	sri (ENSEBUG00000003631)	ENSEBUG00000003778	gars1 (ENSEBUG00000002254) #22	zgc:174895 (ENSEBUG00000012611)	ENSEBUG00000009191	gabbr2 (ENSEBUG00000009358)	ENSEBUG00000014230	ENSEBUG00000001687	ENSEBUG00000005961	ENSEBUG00000009434	ENSEBUG00000015694	ENSEBUG00000006666	ENSEBUG00000007386	ENSEBUG00000012502	ENSEBUG00000014768	ENSEBUG00000014227
Hagfish	MODERN SPECIES	1305													ENSEBUG00000001185	sri (ENSEBUG00000007657)	ENSEBUG00000008667	gars1 (ENSEBUG00000002654) #22	ENSEBUG00000002420	ENSEBUG00000013269	ENSEBUG00000017060	ENSEBUG00000010494	ENSEBUG00000007354	ENSEBUG00000001355	trpc7a (ENSEBUG00000016693)	ENSEBUG00000006627	UBE2A (ENSEBUG00000008768)	cwf19l2 (ENSEBUG00000015330)	ENSEBUG00000010951	GUCY1A2 (ENSEBUG00000002662)
Hagfish	MODERN SPECIES	758																ENSEBUG00000009059 #22	ENSEBUG00000006816	ENSEBUG00000013047	ENSEBUG00000008894	ENSEBUG00000007014	ENSEBUG00000005298	ENSEBUG00000016466	ankib1a (ENSEBUG00000006186)	ENSEBUG00000003038	ENSEBUG00000015241
Lamprey	MODERN SPECIES	6043													ENSPMAG00000006640	ENSPMAG00000006628	nup35 (ENSPMAG00000006604)	gars1 (ENSPMAG00000006586) #22
Ciona	ANCESTRAL SPECIES																	ENSGT00940000153759.a.a #22
Ciona intestinalis	MODERN SPECIES	7	ENSCING00000021851	ENSCING00000008925	ENSCING00000012497	ENSCING00000023284	ENSCING00000012498	ENSCING00000021147	ENSCING00000021553	ENSCING00000009856	ENSCING00000008930	ENSCING00000024567	ENSCING00000008942	ENSCING00000012493	ENSCING00000008941	ENSCING00000019360	ENSCING00000008939	ENSCING00000008937 #22	ENSCING00000019268	ENSCING00000008936	ENSCING00000008935	ENSCING00000008933	ENSCING00000012495	ENSCING00000019658	ENSCING00000008932	ENSCING00000009857	ENSCING00000008945	ENSCING00000012480	ENSCING00000008944	ENSCING00000000132	ENSCING00000012482	ENSCING00000019421	ENSCING00000008943
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00940000153759.a.a #22
Fruitfly	MODERN SPECIES	18	CG32148 (FBgn0047338)	Rpn12R (FBgn0036465)	ind (FBgn0025776)	CG43678 (FBgn0263761)	CG18581 (FBgn0036466)	CG12310 (FBgn0036467)	CG43679 (FBgn0263762)	CG13461 (FBgn0036468)	CG43680 (FBgn0263763)	CG18649 (FBgn0036469)	EAChm (FBgn0036470)	CG13460 (FBgn0036471)	Plp (FBgn0086690)	Or71a (FBgn0036474)	sstn (FBgn0036476)	GlyRS (FBgn0027088) #22	CTPsyn (FBgn0266452)	CG45071 (FBgn0266441)	CG13458 (FBgn0036479)	Cep135 (FBgn0036480)	CG16959 (FBgn0036481)	CG32847 (FBgn0052847)	CG13457 (FBgn0036482)	CG12316 (FBgn0036483)	Pdi (FBgn0286818)	CG32147 (FBgn0047178)	Pex3 (FBgn0036484)	FucTA (FBgn0036485)	Msh6 (FBgn0036486)	Prp31 (FBgn0036487)	CG7011 (FBgn0036489)
Caenorhabditis elegans	MODERN SPECIES	2	cutl-19 (WBGene00022533)	ZC155.4 (WBGene00022532)	syx-16 (WBGene00022534)	morc-1 (WBGene00022531)	emb-8 (WBGene00001262)	K10D2.7 (WBGene00019633)	hira-1 (WBGene00019627)	K10D2.8 (WBGene00189952)	pup-2 (WBGene00019628)	cid-1 (WBGene00019629)	emb-1 (WBGene00019630)	K10D2.5 (WBGene00019631)	prp-19 (WBGene00020423)	ulp-1 (WBGene00006736)	T10F2.2 (WBGene00020422)	gars-1 (WBGene00001744) #22	T10F2.5 (WBGene00044604)	oxy-4 (WBGene00021902)	Y54H5A.1 (WBGene00021899)	rbm-42 (WBGene00021901)	Y54H5A.2 (WBGene00021900)	tbx-2 (WBGene00006543)	sax-2 (WBGene00004728)	dpy-17 (WBGene00001076)	F54D8.6 (WBGene00018802)	F54D8.10 (WBGene00284847)	cah-1 (WBGene00000279)	cox-6A (WBGene00006519)	alh-1 (WBGene00000107)	ttbk-6 (WBGene00016673)	C45G9.12 (WBGene00016683)
Bilateria	ANCESTRAL SPECIES																	ENSGT00940000153759.a.b ##22
Chordata	ANCESTRAL SPECIES																	ENSGT00940000153759.a.b ##22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000153759.a.b ##22
Gnathostomata	ANCESTRAL SPECIES	70	ENSGT01050000244893.c.a.a	ENSGT01050000244961.a	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837
Euteleostomi	ANCESTRAL SPECIES	78	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.E	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837
Sarcopterygii	ANCESTRAL SPECIES	24	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.E	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00940000156498	ENSGT00940000154294	ENSGT00390000010581	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364
Tetrapoda	ANCESTRAL SPECIES	30	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.F	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00940000156498	ENSGT00390000010581	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364	ENSGT00390000016493
Amniota	ANCESTRAL SPECIES	32	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00940000166534	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00390000018397	ENSGT00530000063282	ENSGT00940000155111	ENSGT00950000182860.a.a.a	ENSGT00390000012062
Sauria	ANCESTRAL SPECIES	29	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00940000166534	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00390000018397	ENSGT00530000063282	ENSGT00940000155111	ENSGT00950000182860.a.a.a	ENSGT00390000012062	ENSGT00470000042293.a.b
Archelosauria	ANCESTRAL SPECIES	19	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00960000191166	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00940000156498	ENSGT00390000010581	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b
Archosauria	ANCESTRAL SPECIES	12	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00960000191166	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00940000156498	ENSGT00390000010581	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b
Aves	ANCESTRAL SPECIES	17	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00960000191166	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364
Neognathae	ANCESTRAL SPECIES	17	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00960000191166	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00960000190852	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b
Neognathae_b	ANCESTRAL SPECIES	19	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00960000190852	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364
Passeriformes	ANCESTRAL SPECIES	17	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412.e	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00960000190852	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364
Passeriformes_d	ANCESTRAL SPECIES	17	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412.e	ENSGT00390000005412.f	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00960000190852	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364
Passeriformes_g	ANCESTRAL SPECIES	20	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412.e	ENSGT00390000005412.f	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00960000190852	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364
Medium ground finch	MODERN SPECIES	98	PRKCA (ENSGFOG00000011031)	CACNG5 (ENSGFOG00000011028)	CACNG4 (ENSGFOG00000011023)	CACNG1 (ENSGFOG00000011017)	HELZ (ENSGFOG00000010991)	PSMD12 (ENSGFOG00000010979)	PITPNC1 (ENSGFOG00000010905)	NOL11 (ENSGFOG00000010859)	BPTF (ENSGFOG00000010803)	ENSGFOG00000010783	KPNA2 (ENSGFOG00000010775)	SMURF2 (ENSGFOG00000010749)	ENSGFOG00000010741	ENSGFOG00000010735	DDX5 (ENSGFOG00000010584)	POLG2 (ENSGFOG00000010571) ##22	ENSGFOG00000010566	PECAM1 (ENSGFOG00000010528)	TEX2 (ENSGFOG00000010520)	ERN1 (ENSGFOG00000010516)	ENSGFOG00000010513	ZNF207 (ENSGFOG00000010496)	C17orf75 (ENSGFOG00000010489)	RHBDL3 (ENSGFOG00000010485)	RHOT1 (ENSGFOG00000010462)	ENSGFOG00000010447	ENSGFOG00000010441	ATAD5 (ENSGFOG00000010420)	CRLF3 (ENSGFOG00000010409)	SUZ12 (ENSGFOG00000010393)	UTP6 (ENSGFOG00000010377)
Passeroidea	ANCESTRAL SPECIES	19	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412.e	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00960000190852	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364
Common canary	MODERN SPECIES	27	APOH (ENSSCAG00000013741)	PRKCA (ENSSCAG00000013750)	CACNG4 (ENSSCAG00000013764)	CACNG1 (ENSSCAG00000013775)	HELZ (ENSSCAG00000013798)	PSMD12 (ENSSCAG00000013806)	ENSSCAG00000013811	ENSSCAG00000013818	NOL11 (ENSSCAG00000013831)	BPTF (ENSSCAG00000013886)	ENSSCAG00000013943	KPNA2 (ENSSCAG00000013945)	SMURF2 (ENSSCAG00000013953)	CEP95 (ENSSCAG00000013970)	DDX5 (ENSSCAG00000013981)	POLG2 (ENSSCAG00000013994) ##22	ENSSCAG00000014020	PECAM1 (ENSSCAG00000014022)	TEX2 (ENSSCAG00000014028)	ERN1 (ENSSCAG00000014053)	ENSSCAG00000014086	ZNF207 (ENSSCAG00000014094)	C17orf75 (ENSSCAG00000014104)	RHBDL3 (ENSSCAG00000014114)	RHOT1 (ENSSCAG00000014126)	ENSSCAG00000014140	ADAP2 (ENSSCAG00000014146)	ATAD5 (ENSSCAG00000014152)	CRLF3 (ENSSCAG00000014162)	SUZ12 (ENSSCAG00000014176)	UTP6 (ENSSCAG00000014216)
Flycatcher	MODERN SPECIES	8	CACNG1 (ENSFALG00000002409)	ENSFALG00000023098	HELZ (ENSFALG00000002404)	PSMD12 (ENSFALG00000002393)	ENSFALG00000025352	ENSFALG00000024321	NOL11 (ENSFALG00000002360)	BPTF (ENSFALG00000002353)	C17orf58 (ENSFALG00000025611)	KPNA2 (ENSFALG00000002347)	ENSFALG00000027352	SMURF2 (ENSFALG00000002335)	ENSFALG00000002329	ENSFALG00000028319	DDX5 (ENSFALG00000002317)	POLG2 (ENSFALG00000024702) ##22	PECAM1 (ENSFALG00000002311)	TEX2 (ENSFALG00000002309)	ERN1 (ENSFALG00000002305)	ENSFALG00000002303	ZNF207 (ENSFALG00000002301)	C17orf75 (ENSFALG00000002298)	RHBDL3 (ENSFALG00000002294)	RHOT1 (ENSFALG00000002293)	ENSFALG00000002290	ENSFALG00000027594	ENSFALG00000023506	ADAP2 (ENSFALG00000002289)	ENSFALG00000002286	CRLF3 (ENSFALG00000023105)	SUZ12 (ENSFALG00000002283)
Great tit	MODERN SPECIES	8	PRKCA (ENSPMJG00000017150)	CACNG5 (ENSPMJG00000017152)	CACNG4 (ENSPMJG00000017153)	CACNG1 (ENSPMJG00000017154)	HELZ (ENSPMJG00000017155)	PSMD12 (ENSPMJG00000017156)	ENSPMJG00000017157	ENSPMJG00000017158	NOL11 (ENSPMJG00000017159)	BPTF (ENSPMJG00000017161)	ENSPMJG00000017250	KPNA2 (ENSPMJG00000017255)	SMURF2 (ENSPMJG00000017281)	CEP95 (ENSPMJG00000017311)	DDX5 (ENSPMJG00000017312)	POLG2 (ENSPMJG00000017691) ##22	ENSPMJG00000017692	TEX2 (ENSPMJG00000017705)	ERN1 (ENSPMJG00000017726)	ENSPMJG00000017727	ZNF207 (ENSPMJG00000017728)	C17orf75 (ENSPMJG00000017729)	RHBDL3 (ENSPMJG00000017730)	RHOT1 (ENSPMJG00000017731)	ENSPMJG00000018054	ENSPMJG00000018056	ADAP2 (ENSPMJG00000018058)	ATAD5 (ENSPMJG00000018068)	CRLF3 (ENSPMJG00000018069)	SUZ12 (ENSPMJG00000018070)	UTP6 (ENSPMJG00000018071)
Neognathae_c	ANCESTRAL SPECIES	23	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00960000190852	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364
Kakapo	MODERN SPECIES	8	ENSSHBG00005021132	APOH (ENSSHBG00005021131)	PRKCA (ENSSHBG00005021107)	CACNG5 (ENSSHBG00005021097)	CACNG4 (ENSSHBG00005021095)	CACNG1 (ENSSHBG00005021094)	HELZ (ENSSHBG00005021091)	PSMD12 (ENSSHBG00005021089)	ENSSHBG00005021088	NOL11 (ENSSHBG00005021082)	BPTF (ENSSHBG00005021077)	ENSSHBG00005021075	KPNA2 (ENSSHBG00005021072)	SMURF2 (ENSSHBG00005021068)	DDX5 (ENSSHBG00005021066)	POLG2 (ENSSHBG00005021064) ##22	PECAM1 (ENSSHBG00005021060)	TEX2 (ENSSHBG00005021055)	ERN1 (ENSSHBG00005021046)	ENSSHBG00005021040	ENSSHBG00005021039	ZNF207 (ENSSHBG00005021036)	C17orf75 (ENSSHBG00005021032)	RHBDL3 (ENSSHBG00005021030)	RHOT1 (ENSSHBG00005021027)	ENSSHBG00005021025	ENSSHBG00005021024	ADAP2 (ENSSHBG00005021022)	ATAD5 (ENSSHBG00005021019)	ENSSHBG00005021016	SUZ12 (ENSSHBG00005021011)
Golden eagle	MODERN SPECIES	21	APOH (ENSACCG00020006238)	PRKCA (ENSACCG00020006209)	CACNG5 (ENSACCG00020006174)	CACNG4 (ENSACCG00020006161)	CACNG1 (ENSACCG00020006150)	HELZ (ENSACCG00020006098)	PSMD12 (ENSACCG00020006075)	ENSACCG00020006054	NOL11 (ENSACCG00020006034)	BPTF (ENSACCG00020005954)	ENSACCG00020005878	KPNA2 (ENSACCG00020005858)	SMURF2 (ENSACCG00020005835)	CEP95 (ENSACCG00020005805)	DDX5 (ENSACCG00020005769)	POLG2 (ENSACCG00020005753) ##22	ENSACCG00020005734	PECAM1 (ENSACCG00020005689)	TEX2 (ENSACCG00020005626)	ERN1 (ENSACCG00020005588)	ENSACCG00020005568	ZNF207 (ENSACCG00020005534)	C17orf75 (ENSACCG00020005449)	RHBDL3 (ENSACCG00020005434)	RHOT1 (ENSACCG00020005369)	ENSACCG00020005304	ADAP2 (ENSACCG00020005289)	ATAD5 (ENSACCG00020005934)	CRLF3 (ENSACCG00020005897)	SUZ12 (ENSACCG00020005857)	UTP6 (ENSACCG00020005776)
Galloanserae	ANCESTRAL SPECIES	19	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00960000191166	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00960000190852	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b
Anatidae	ANCESTRAL SPECIES	18	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00960000191166	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00960000191547	ENSGT00940000164538	ENSGT00960000190852	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b
Pink-footed goose	MODERN SPECIES	121	PRKCA (ENSABRG00000002731)	CACNG5 (ENSABRG00000002774)	CACNG4 (ENSABRG00000002813)	CACNG1 (ENSABRG00000002844)	HELZ (ENSABRG00000002920)	PSMD12 (ENSABRG00000003749)	ENSABRG00000004040	ENSABRG00000004058	NOL11 (ENSABRG00000004072)	BPTF (ENSABRG00000004387)	ENSABRG00000007230	KPNA2 (ENSABRG00000007236)	SMURF2 (ENSABRG00000007429)	CEP95 (ENSABRG00000008450)	DDX5 (ENSABRG00000008564)	POLG2 (ENSABRG00000009642) ##22	ENSABRG00000009666	ENSABRG00000009698	TEX2 (ENSABRG00000009764)	ERN1 (ENSABRG00000009818)	ENSABRG00000009912	ZNF207 (ENSABRG00000009954)	C17orf75 (ENSABRG00000010019)	RHBDL3 (ENSABRG00000010034)	RHOT1 (ENSABRG00000010161)	ENSABRG00000011661	ENSABRG00000011669	ENSABRG00000011681	ADAP2 (ENSABRG00000011690)	ATAD5 (ENSABRG00000011881)	CRLF3 (ENSABRG00000011925)
Duck	MODERN SPECIES	9	CYBC1 (ENSAPLG00000008407)	NARF (ENSAPLG00000007817)	FOXK2 (ENSAPLG00000007723)	WDR45B (ENSAPLG00000007533)	RAB40B (ENSAPLG00000027488)	FN3KRP (ENSAPLG00000011833)	ENSAPLG00000011664	TBCD (ENSAPLG00000010791)	ZNF750 (ENSAPLG00000011661)	B3GNTL1 (ENSAPLG00000010702)	METRNL (ENSAPLG00000010666)	KPNA2 (ENSAPLG00000010252)	SMURF2 (ENSAPLG00000009867)	CEP95 (ENSAPLG00000009428)	DDX5 (ENSAPLG00000009071)	POLG2 (ENSAPLG00000009056) ##22	ENSAPLG00000009000	ENSAPLG00000008476	ENSAPLG00000024940	ERN1 (ENSAPLG00000007775)	ENSAPLG00000001183	ZNF207 (ENSAPLG00000007390)	ENSAPLG00000028655	C17orf75 (ENSAPLG00000007375)	RHBDL3 (ENSAPLG00000007263)	RHOT1 (ENSAPLG00000006989)	ENSAPLG00000024924	ENSAPLG00000006987	ADAP2 (ENSAPLG00000006851)	ENSAPLG00000029046	ENSAPLG00000006584
Phasianidae	ANCESTRAL SPECIES	18	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364	ENSGT00390000016493	ENSGT00440000033742.a.b	ENSGT00940000156193
Japanese quail	MODERN SPECIES	9	PRKCA (ENSCJPG00005021289)	CACNG5 (ENSCJPG00005021308)	CACNG4 (ENSCJPG00005021309)	CACNG1 (ENSCJPG00005021310)	HELZ (ENSCJPG00005021311)	PSMD12 (ENSCJPG00005021313)	ENSCJPG00005021315	ENSCJPG00005021316	NOL11 (ENSCJPG00005021317)	BPTF (ENSCJPG00005021334)	ENSCJPG00005021342	KPNA2 (ENSCJPG00005021343)	SMURF2 (ENSCJPG00005021344)	CEP95 (ENSCJPG00005021366)	DDX5 (ENSCJPG00005021370)	POLG2 (ENSCJPG00005021381) ##22	ENSCJPG00005021382	ENSCJPG00005021383	TEX2 (ENSCJPG00005021384)	ERN1 (ENSCJPG00005021385)	ZNF207 (ENSCJPG00005021386)	C17orf75 (ENSCJPG00005021387)	RHBDL3 (ENSCJPG00005021388)	RHOT1 (ENSCJPG00005021389)	ADAP2 (ENSCJPG00005021391)	ATAD5 (ENSCJPG00005021392)	CRLF3 (ENSCJPG00005021393)	SUZ12 (ENSCJPG00005021394)	UTP6 (ENSCJPG00005021395)	RAB11FIP4 (ENSCJPG00005021398)	SCPEP1 (ENSCJPG00005021399)
Phasianidae_b	ANCESTRAL SPECIES	25	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364	ENSGT00390000016493	ENSGT00440000033742.a.b	ENSGT00940000156193
Chicken	MODERN SPECIES	9	APOH (ENSGALG00010029213)	PRKCA (ENSGALG00010029209)	CACNG5 (ENSGALG00010029208)	CACNG4 (ENSGALG00010029206)	CACNG1 (ENSGALG00010029205)	HELZ (ENSGALG00010029204)	PSMD12 (ENSGALG00010029202)	ENSGALG00010029328	NOL11 (ENSGALG00010029323)	BPTF (ENSGALG00010029322)	C17orf58 (ENSGALG00010029318)	KPNA2 (ENSGALG00010029317)	SMURF2 (ENSGALG00010029312)	CEP95 (ENSGALG00010029306)	DDX5 (ENSGALG00010029634)	POLG2 (ENSGALG00010029633) ##22	MILR1 (ENSGALG00010029629)	PECAM1 (ENSGALG00010029625)	TEX2 (ENSGALG00010029618)	ERN1 (ENSGALG00010029610)	ZNF207 (ENSGALG00010029607)	C17orf75 (ENSGALG00010029605)	RHBDL3 (ENSGALG00010029603)	RHOT1 (ENSGALG00010029600)	ADAP2 (ENSGALG00010029597)	ATAD5 (ENSGALG00010029596)	CRLF3 (ENSGALG00010029594)	SUZ12 (ENSGALG00010029591)	UTP6 (ENSGALG00010029590)	RAB11FIP4 (ENSGALG00010029588)	COIL (ENSGALG00010029586)
Turkey	MODERN SPECIES	12	ENSMGAG00000006491	ENSMGAG00000018880	CACNG5 (ENSMGAG00000018393)	CACNG4 (ENSMGAG00000007366)	CACNG1 (ENSMGAG00000007406)	HELZ (ENSMGAG00000007422)	PSMD12 (ENSMGAG00000007462)	NOL11 (ENSMGAG00000007511)	ENSMGAG00000007489	BPTF (ENSMGAG00000007560)	C17orf58 (ENSMGAG00000007583)	KPNA2 (ENSMGAG00000007585)	SMURF2 (ENSMGAG00000007618)	CEP95 (ENSMGAG00000007638)	DDX5 (ENSMGAG00000007667)	POLG2 (ENSMGAG00000007713) ##22	MILR1 (ENSMGAG00000007724)	PECAM1 (ENSMGAG00000007729)	TEX2 (ENSMGAG00000007790)	ERN1 (ENSMGAG00000007831)	ZNF207 (ENSMGAG00000007868)	C17orf75 (ENSMGAG00000007909)	RHBDL3 (ENSMGAG00000007928)	RHOT1 (ENSMGAG00000007956)	ADAP2 (ENSMGAG00000008022)	ENSMGAG00000008046	CRLF3 (ENSMGAG00000008063)	SUZ12 (ENSMGAG00000008085)	ENSMGAG00000008111	RAB11FIP4 (ENSMGAG00000008176)	SCPEP1 (ENSMGAG00000008198)
African ostrich	MODERN SPECIES	761	PRKCA (ENSSCUG00000011744)	CACNG5 (ENSSCUG00000011738)	CACNG4 (ENSSCUG00000011733)	CACNG1 (ENSSCUG00000011727)	ENSSCUG00000011724	HELZ (ENSSCUG00000011716)	PSMD12 (ENSSCUG00000011691)	ENSSCUG00000011684	NOL11 (ENSSCUG00000011681)	BPTF (ENSSCUG00000011676)	C17orf58 (ENSSCUG00000011671)	KPNA2 (ENSSCUG00000011668)	SMURF2 (ENSSCUG00000011646)	CEP95 (ENSSCUG00000011636)	DDX5 (ENSSCUG00000011632)	POLG2 (ENSSCUG00000011626) ##22	ENSSCUG00000011618	PECAM1 (ENSSCUG00000011610)	TEX2 (ENSSCUG00000011604)	ERN1 (ENSSCUG00000011594)	ZNF207 (ENSSCUG00000011586)	C17orf75 (ENSSCUG00000011581)	RHBDL3 (ENSSCUG00000011577)	RHOT1 (ENSSCUG00000011574)	ENSSCUG00000011572	ADAP2 (ENSSCUG00000011570)	ENSSCUG00000011568	ATAD5 (ENSSCUG00000011565)	CRLF3 (ENSSCUG00000011562)	SUZ12 (ENSSCUG00000011554)	UTP6 (ENSSCUG00000011549)
Australian saltwater crocodile	MODERN SPECIES	47	AMZ2 (ENSCPRG00005018575)	GNA13 (ENSCPRG00005018577)	RGS9 (ENSCPRG00005018585)	AXIN2 (ENSCPRG00005018595)	CEP112 (ENSCPRG00005018604)	APOH (ENSCPRG00005018622)	ENSCPRG00005018627	PITPNC1 (ENSCPRG00005018628)	NOL11 (ENSCPRG00005018631)	BPTF (ENSCPRG00005018666)	C17orf58 (ENSCPRG00005000065)	KPNA2 (ENSCPRG00005000070)	SMURF2 (ENSCPRG00005000114)	CEP95 (ENSCPRG00005000605)	DDX5 (ENSCPRG00005000804)	POLG2 (ENSCPRG00005001355) ##22	PECAM1 (ENSCPRG00005001389)	TEX2 (ENSCPRG00005001502)	ERN1 (ENSCPRG00005001569)	ENSCPRG00005001679	ZNF207 (ENSCPRG00005001692)	C17orf75 (ENSCPRG00005001731)	RHBDL3 (ENSCPRG00005001733)	RHOT1 (ENSCPRG00005001760)	ENSCPRG00005001843	ADAP2 (ENSCPRG00005001848)	TEFM (ENSCPRG00005001858)	ATAD5 (ENSCPRG00005001869)	CRLF3 (ENSCPRG00005001875)	SUZ12 (ENSCPRG00005001886)	UTP6 (ENSCPRG00005002001)
Cryptodira	ANCESTRAL SPECIES	21	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00950000182933.B.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00960000191166	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00940000156498	ENSGT00390000010581	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b
Testudinoidea	ANCESTRAL SPECIES	14	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B.f	ENSGT00390000013973.B.e	ENSGT00730000111057	ENSGT00960000191166	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00940000156498	ENSGT00390000010581	ENSGT00940000153469.a.a
Emydidae	ANCESTRAL SPECIES	17	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B.f	ENSGT00390000013973.B.e	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00940000156498	ENSGT00390000010581	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b
Three-toed box turtle	MODERN SPECIES	90	APOH (ENSTMTG00000003230)	PRKCA (ENSTMTG00000003362)	CACNG5 (ENSTMTG00000004605)	CACNG4 (ENSTMTG00000004628)	CACNG1 (ENSTMTG00000004649)	HELZ (ENSTMTG00000004687)	PSMD12 (ENSTMTG00000004756)	ENSTMTG00000004788	NOL11 (ENSTMTG00000004827)	BPTF (ENSTMTG00000004986)	ENSTMTG00000005856	KPNA2 (ENSTMTG00000005866)	SMURF2 (ENSTMTG00000005892)	CEP95 (ENSTMTG00000005957)	DDX5 (ENSTMTG00000006023)	POLG2 (ENSTMTG00000006112) ##22	MILR1 (ENSTMTG00000006125)	PECAM1 (ENSTMTG00000006152)	TEX2 (ENSTMTG00000006199)	ERN1 (ENSTMTG00000006268)	ENSTMTG00000006353	ZNF207 (ENSTMTG00000006365)	C17orf75 (ENSTMTG00000006429)	RHBDL3 (ENSTMTG00000006520)	RHOT1 (ENSTMTG00000006729)	ENSTMTG00000008276	ENSTMTG00000008285	ADAP2 (ENSTMTG00000008301)	TEFM (ENSTMTG00000008379)	ENSTMTG00000008388	ENSTMTG00000008425
painted turtle	MODERN SPECIES	696	CEP112 (ENSCPBG00000009619)	APOH (ENSCPBG00000009606)	PRKCA (ENSCPBG00000009586)	CACNG4 (ENSCPBG00000009580)	CACNG1 (ENSCPBG00000009568)	HELZ (ENSCPBG00000009548)	PSMD12 (ENSCPBG00000009536)	ENSCPBG00000009518	NOL11 (ENSCPBG00000009509)	BPTF (ENSCPBG00000009294)	C17orf58 (ENSCPBG00000009255)	KPNA2 (ENSCPBG00000009248)	SMURF2 (ENSCPBG00000009240)	CEP95 (ENSCPBG00000009235)	DDX5 (ENSCPBG00000009227)	POLG2 (ENSCPBG00000009222) ##22	ENSCPBG00000009218	PECAM1 (ENSCPBG00000009202)	TEX2 (ENSCPBG00000009195)	ERN1 (ENSCPBG00000009183)	ENSCPBG00000009166	SCN4A (ENSCPBG00000009146)	CD79B (ENSCPBG00000009124)	ENSCPBG00000009114	RDM1 (ENSCPBG00000009105)	ENSCPBG00000009081	PLEKHM1 (ENSCPBG00000009035)	TMEM98 (ENSCPBG00000009014)	GRN (ENSCPBG00000008991)	FAM171A2 (ENSCPBG00000008975)	ENSCPBG00000008967
Testudinidae	ANCESTRAL SPECIES	18	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B.f	ENSGT00390000013973.B.e	ENSGT00730000111057	ENSGT00960000191166	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000154294.j	ENSGT00390000010581	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b
Abingdon island giant tortoise	MODERN SPECIES	2328													SMURF2 (ENSCABG00000004546)	CEP95 (ENSCABG00000004558)	DDX5 (ENSCABG00000004562)	POLG2 (ENSCABG00000004568) ##22	ENSCABG00000004606	PECAM1 (ENSCABG00000004618)	TEX2 (ENSCABG00000004671)	ERN1 (ENSCABG00000004684)	ENSCABG00000004738	ENSCABG00000004743	ZNF207 (ENSCABG00000004745)	C17orf75 (ENSCABG00000004746)	RHBDL3 (ENSCABG00000004774)	RHOT1 (ENSCABG00000004776)	ENSCABG00000004779	TEFM (ENSCABG00000004781)	ATAD5 (ENSCABG00000004786)	CRLF3 (ENSCABG00000004794)	SUZ12 (ENSCABG00000004805)
Goode s thornscrub tortoise	MODERN SPECIES	6	CEP112 (ENSGEVG00005017583)	PRKCA (ENSGEVG00005016453)	CACNG5 (ENSGEVG00005016173)	CACNG4 (ENSGEVG00005016122)	CACNG1 (ENSGEVG00005016054)	HELZ (ENSGEVG00005016006)	PSMD12 (ENSGEVG00005015975)	ENSGEVG00005015909	NOL11 (ENSGEVG00005015879)	BPTF (ENSGEVG00005015783)	C17orf58 (ENSGEVG00005015723)	KPNA2 (ENSGEVG00005015695)	SMURF2 (ENSGEVG00005015606)	CEP95 (ENSGEVG00005015554)	DDX5 (ENSGEVG00005015523)	POLG2 (ENSGEVG00005015497) ##22	ENSGEVG00005015460	PECAM1 (ENSGEVG00005015288)	TEX2 (ENSGEVG00005015234)	ERN1 (ENSGEVG00005014226)	ENSGEVG00005014037	ZNF207 (ENSGEVG00005014000)	ENSGEVG00005013918	C17orf75 (ENSGEVG00005013882)	RHBDL3 (ENSGEVG00005013807)	RHOT1 (ENSGEVG00005013679)	ENSGEVG00005013633	TEFM (ENSGEVG00005013617)	ATAD5 (ENSGEVG00005013579)	CRLF3 (ENSGEVG00005013459)	SUZ12 (ENSGEVG00005013413)
Chinese turtle	MODERN SPECIES	75	CACNG5 (ENSPSIG00000017148)	CACNG4 (ENSPSIG00000017256)	CACNG1 (ENSPSIG00000005096)	HELZ (ENSPSIG00000005225)	PSMD12 (ENSPSIG00000006226)	PITPNC1 (ENSPSIG00000006834)	NOL11 (ENSPSIG00000007198)	BPTF (ENSPSIG00000008454)	ENSPSIG00000009235	KPNA2 (ENSPSIG00000009274)	ENSPSIG00000000777	ENSPSIG00000010279	ENSPSIG00000010564	CEP95 (ENSPSIG00000010598)	DDX5 (ENSPSIG00000010830)	POLG2 (ENSPSIG00000011394) ##22	ENSPSIG00000011624
Lepidosauria	ANCESTRAL SPECIES	28	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00730000111057	ENSGT00960000191166	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00390000010581	ENSGT00940000156498	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00950000182897.A	ENSGT00940000154281	ENSGT00940000156107	ENSGT00390000002517.b	ENSGT00940000154411.`b.i.h.b	ENSGT00940000158308	ENSGT00390000003749	ENSGT00940000160756	ENSGT00940000159517	ENSGT00950000183188.A.a	ENSGT00940000157144
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B	ENSGT00950000182897.A	ENSGT00940000154281	ENSGT00940000156107	ENSGT00390000002517.b	ENSGT00940000154411.`b.i.h.b	ENSGT00940000158308	ENSGT00390000003749	ENSGT00940000160756	ENSGT00940000159517	ENSGT00950000183188.A.a	ENSGT00940000157144
Common wall lizard	MODERN SPECIES	10	ENSPMRG00000003709	CACNG4 (ENSPMRG00000003707)	CACNG1 (ENSPMRG00000003703)	HELZ (ENSPMRG00000003677)	PSMD12 (ENSPMRG00000003665)	ENSPMRG00000003662	ENSPMRG00000003659	NOL11 (ENSPMRG00000003654)	BPTF (ENSPMRG00000003120)	ENSPMRG00000002951	KPNA2 (ENSPMRG00000002945)	SMURF2 (ENSPMRG00000002926)	ENSPMRG00000002920	CEP95 (ENSPMRG00000002907)	DDX5 (ENSPMRG00000002882)	POLG2 (ENSPMRG00000002829) ##22	PECAM1 (ENSPMRG00000002789)	ENSPMRG00000002775	TEX2 (ENSPMRG00000002769)	ERN1 (ENSPMRG00000002739)	PA2G4 (ENSPMRG00000002714)	ERBB3 (ENSPMRG00000002314)	RPS26 (ENSPMRG00000002264)	ENSPMRG00000002257	IKZF4 (ENSPMRG00000002252)	SUOX (ENSPMRG00000002248)	RAB5B (ENSPMRG00000002236)	DGKA (ENSPMRG00000002074)	PYM1 (ENSPMRG00000002004)	MMP19 (ENSPMRG00000001990)	ENSPMRG00000001975
Argentine black and white tegu	MODERN SPECIES	73	ENSSMRG00000004476	CACNG5 (ENSSMRG00000004478)	CACNG4 (ENSSMRG00000004530)	CACNG1 (ENSSMRG00000004531)	HELZ (ENSSMRG00000004552)	PSMD12 (ENSSMRG00000004597)	ENSSMRG00000004634	ENSSMRG00000004646	NOL11 (ENSSMRG00000004651)	BPTF (ENSSMRG00000004657)	C17orf58 (ENSSMRG00000004679)	KPNA2 (ENSSMRG00000004680)	SMURF2 (ENSSMRG00000004688)	CEP95 (ENSSMRG00000004700)	DDX5 (ENSSMRG00000004722)	POLG2 (ENSSMRG00000004727) ##22	PECAM1 (ENSSMRG00000004796)	TEX2 (ENSSMRG00000004815)	ERN1 (ENSSMRG00000004877)	ENSSMRG00000004885	ZC3H10 (ENSSMRG00000004895)	PA2G4 (ENSSMRG00000004898)	ERBB3 (ENSSMRG00000004913)	ENSSMRG00000004945	ENSSMRG00000004957	IKZF4 (ENSSMRG00000004965)	SUOX (ENSSMRG00000004973)	RAB5B (ENSSMRG00000004975)	CDK2 (ENSSMRG00000004980)	PMEL (ENSSMRG00000004981)	DGKA (ENSSMRG00000004995)
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00950000182897.A	ENSGT00940000154281	ENSGT00940000156107	ENSGT00390000002517.b	ENSGT00940000154411.`b.i.h.b	ENSGT00940000158308	ENSGT00390000003749	ENSGT00940000160756	ENSGT00940000159517	ENSGT00950000183188.A.a	ENSGT00940000157144	ENSGT00730000111107
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00950000182897.A	ENSGT00940000154281	ENSGT00940000156107	ENSGT00390000002517.b	ENSGT00940000154411.`b.i.h.b	ENSGT00940000158308	ENSGT00390000003749	ENSGT00940000160756	ENSGT00940000159517	ENSGT00950000183188.A.a	ENSGT00940000157144	ENSGT00730000111107
Elapidae_a	ANCESTRAL SPECIES	50	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00950000182897.A	ENSGT00940000154281	ENSGT00940000156107.m	ENSGT00390000002517.b	ENSGT00940000154411.`b.i.h.b	ENSGT00940000158308	ENSGT00390000003749	ENSGT00940000160756	ENSGT00940000159517	ENSGT00950000183188.A.a	ENSGT00940000157144	ENSGT00730000111107
Acanthophiinae	ANCESTRAL SPECIES	50	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00950000182897.A	ENSGT00940000154281	ENSGT00940000156107.m	ENSGT00390000002517.b	ENSGT00940000156207.b	ENSGT00940000158308	ENSGT00390000003749	ENSGT00940000160756	ENSGT00940000159517	ENSGT00950000183188.A.a	ENSGT00940000157144.e	ENSGT00730000111107
Eastern brown snake	MODERN SPECIES	51	CEP112 (ENSPTXG00000018268)	APOH (ENSPTXG00000018272)	PRKCA (ENSPTXG00000018274)	CACNG5 (ENSPTXG00000018285)	CACNG4 (ENSPTXG00000018286)	CACNG1 (ENSPTXG00000018287)	HELZ (ENSPTXG00000018288)	PSMD12 (ENSPTXG00000018289)	ENSPTXG00000018290	NOL11 (ENSPTXG00000018291)	BPTF (ENSPTXG00000018292)	ENSPTXG00000006175	KPNA2 (ENSPTXG00000006177)	SMURF2 (ENSPTXG00000006180)	DDX5 (ENSPTXG00000006184)	POLG2 (ENSPTXG00000006188) ##22	ENSPTXG00000006198	TEX2 (ENSPTXG00000006205)	ERN1 (ENSPTXG00000006209)	ZC3H10 (ENSPTXG00000006290)	PA2G4 (ENSPTXG00000006292)	ERBB3 (ENSPTXG00000006294)	RPS26 (ENSPTXG00000006296)	ENSPTXG00000006298	IKZF4 (ENSPTXG00000006301)	SUOX (ENSPTXG00000006303)	RAB5B (ENSPTXG00000006306)	CDK2 (ENSPTXG00000006308)	ENSPTXG00000006310	DGKA (ENSPTXG00000006326)	PYM1 (ENSPTXG00000006656)
Mainland tiger snake	MODERN SPECIES	107	PRKCA (ENSNSUG00000010272)	CACNG5 (ENSNSUG00000010269)	CACNG4 (ENSNSUG00000010268)	CACNG1 (ENSNSUG00000010264)	HELZ (ENSNSUG00000010167)	PSMD12 (ENSNSUG00000010165)	ENSNSUG00000010164	ENSNSUG00000010163	NOL11 (ENSNSUG00000010161)	BPTF (ENSNSUG00000009856)	ENSNSUG00000009849	KPNA2 (ENSNSUG00000009848)	SMURF2 (ENSNSUG00000009002)	ENSNSUG00000009001	DDX5 (ENSNSUG00000008998)	POLG2 (ENSNSUG00000008991) ##22	ENSNSUG00000008953	TEX2 (ENSNSUG00000008929)	ERN1 (ENSNSUG00000008797)	ZC3H10 (ENSNSUG00000008796)	PA2G4 (ENSNSUG00000008794)	ERBB3 (ENSNSUG00000008483)	ENSNSUG00000008482	RPS26 (ENSNSUG00000008481)	ENSNSUG00000008480	IKZF4 (ENSNSUG00000008479)	SUOX (ENSNSUG00000008478)	RAB5B (ENSNSUG00000008442)	CDK2 (ENSNSUG00000008434)	ENSNSUG00000008433	ENSNSUG00000008432
Blue-lipped sea krait	MODERN SPECIES	8383															DDX5 (ENSLLTG00000017481)	POLG2 (ENSLLTG00000017480) ##22
Indian cobra	MODERN SPECIES	1	PRKCA (ENSNNAG00000003742)	CACNG5 (ENSNNAG00000004045)	CACNG4 (ENSNNAG00000004125)	CACNG1 (ENSNNAG00000004136)	HELZ (ENSNNAG00000004268)	PSMD12 (ENSNNAG00000005243)	ENSNNAG00000005280	ENSNNAG00000005318	NOL11 (ENSNNAG00000005330)	BPTF (ENSNNAG00000005534)	ENSNNAG00000008128	KPNA2 (ENSNNAG00000008145)	SMURF2 (ENSNNAG00000008200)	ENSNNAG00000008360	DDX5 (ENSNNAG00000008381)	POLG2 (ENSNNAG00000008435) ##22	PECAM1 (ENSNNAG00000008613)	TEX2 (ENSNNAG00000000307)	ERN1 (ENSNNAG00000000626)	ZC3H10 (ENSNNAG00000001333)	PA2G4 (ENSNNAG00000001353)	ERBB3 (ENSNNAG00000001396)	ENSNNAG00000001442	ENSNNAG00000001456	IKZF4 (ENSNNAG00000001473)	SUOX (ENSNNAG00000001505)	RAB5B (ENSNNAG00000001522)	CDK2 (ENSNNAG00000001556)	ENSNNAG00000001599	DGKA (ENSNNAG00000001620)	PYM1 (ENSNNAG00000001643)
tuatara	MODERN SPECIES	657										SMURF2 (ENSSPUG00000004332)	ENSSPUG00000004407	ENSSPUG00000004480	ENSSPUG00000004535	ENSSPUG00000004544	ENSSPUG00000004555	POLG2 (ENSSPUG00000004613) ##22	PECAM1 (ENSSPUG00000004708)	TEX2 (ENSSPUG00000004748)	ERN1 (ENSSPUG00000004797)	ENSSPUG00000005008	ZNF207 (ENSSPUG00000005025)	ENSSPUG00000005047	ENSSPUG00000005056	ENSSPUG00000005060	RHBDL3 (ENSSPUG00000005073)	RHOT1 (ENSSPUG00000005110)	ENSSPUG00000005139	TEFM (ENSSPUG00000005161)	ADAP2 (ENSSPUG00000005174)	ENSSPUG00000005208	ENSSPUG00000005218
Mammalia	ANCESTRAL SPECIES	21	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00940000159417	ENSGT00950000182818.D	ENSGT00390000018397	ENSGT00530000063282	ENSGT00940000155111	ENSGT00950000182860.a.a.a	ENSGT01030000235089	ENSGT00940000154363.B
Theria	ANCESTRAL SPECIES	9	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997	ENSGT00940000158827
Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Carnivora	ANCESTRAL SPECIES	9	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Caniformia	ANCESTRAL SPECIES	6	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Caniformia_b	ANCESTRAL SPECIES	20	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Ursidae	ANCESTRAL SPECIES	19	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830.j	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A.i.b	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Ursus	ANCESTRAL SPECIES	2	ENSGT00390000006544	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830.j	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A.i.b	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997	ENSGT00940000158827
American black bear	MODERN SPECIES	7024														ENSUAMG00000023390	DDX5 (ENSUAMG00000023388)	POLG2 (ENSUAMG00000023386) ##22
Polar bear	MODERN SPECIES	185	CEP112 (ENSUMAG00000021120)	APOH (ENSUMAG00000021099)	PRKCA (ENSUMAG00000019423)	CACNG4 (ENSUMAG00000019143)	CACNG1 (ENSUMAG00000019136)	HELZ (ENSUMAG00000018753)	PSMD12 (ENSUMAG00000018722)	PITPNC1 (ENSUMAG00000018719)	NOL11 (ENSUMAG00000018710)	BPTF (ENSUMAG00000018039)	ENSUMAG00000017884	KPNA2 (ENSUMAG00000017864)	SMURF2 (ENSUMAG00000017838)	CEP95 (ENSUMAG00000017802)	DDX5 (ENSUMAG00000017787)	POLG2 (ENSUMAG00000017776) ##22	MILR1 (ENSUMAG00000017763)	PECAM1 (ENSUMAG00000017729)	TEX2 (ENSUMAG00000017710)	ERN1 (ENSUMAG00000017551)	ENSUMAG00000017521	ENSUMAG00000017519	SCN4A (ENSUMAG00000017504)	CD79B (ENSUMAG00000017499)	ENSUMAG00000017494	ENSUMAG00000017491	SMARCD2 (ENSUMAG00000017465)	PSMC5 (ENSUMAG00000017456)	FTSJ3 (ENSUMAG00000017450)	DDX42 (ENSUMAG00000017438)	CCDC47 (ENSUMAG00000017433)
Giant Panda	MODERN SPECIES	4	APOH (ENSAMEG00000011842)	PRKCA (ENSAMEG00000011747)	CACNG5 (ENSAMEG00000011741)	CACNG4 (ENSAMEG00000018394)	CACNG1 (ENSAMEG00000018395)	HELZ (ENSAMEG00000018396)	PSMD12 (ENSAMEG00000018399)	PITPNC1 (ENSAMEG00000018401)	NOL11 (ENSAMEG00000018406)	BPTF (ENSAMEG00000018402)	ENSAMEG00000018410	ENSAMEG00000018411	ENSAMEG00000002563	CEP95 (ENSAMEG00000002636)	DDX5 (ENSAMEG00000002685)	POLG2 (ENSAMEG00000002728) ##22	ENSAMEG00000031061	ENSAMEG00000002754	PECAM1 (ENSAMEG00000002763)	TEX2 (ENSAMEG00000002814)	ERN1 (ENSAMEG00000002855)	ENSAMEG00000002892	PRR29 (ENSAMEG00000002902)	SCN4A (ENSAMEG00000002909)	CD79B (ENSAMEG00000003033)	GH1 (ENSAMEG00000003038)	ENSAMEG00000003052	SMARCD2 (ENSAMEG00000003062)	PSMC5 (ENSAMEG00000003120)	FTSJ3 (ENSAMEG00000003148)	DDX42 (ENSAMEG00000003200)
Mustelinae	ANCESTRAL SPECIES	1	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT00690000102286.b.hb.a	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Ferret	MODERN SPECIES	186	APOH (ENSMPUG00000014661)	PRKCA (ENSMPUG00000014664)	CACNG5 (ENSMPUG00000014665)	ENSMPUG00000014666	CACNG4 (ENSMPUG00000014667)	CACNG1 (ENSMPUG00000014668)	HELZ (ENSMPUG00000014672)	PSMD12 (ENSMPUG00000014679)	ENSMPUG00000014682	NOL11 (ENSMPUG00000014685)	BPTF (ENSMPUG00000014688)	ENSMPUG00000014693	ENSMPUG00000014695	SMURF2 (ENSMPUG00000014733)	CEP95 (ENSMPUG00000014740)	POLG2 (ENSMPUG00000014747) ##22	MILR1 (ENSMPUG00000014750)	ENSMPUG00000019920	PECAM1 (ENSMPUG00000014754)	TEX2 (ENSMPUG00000014762)	ENSMPUG00000014766	ERN1 (ENSMPUG00000014770)	ICAM2 (ENSMPUG00000014775)	PRR29 (ENSMPUG00000014778)	SCN4A (ENSMPUG00000014784)	CD79B (ENSMPUG00000014790)	ENSMPUG00000014794	ENSMPUG00000014797	ENSMPUG00000014835	PSMC5 (ENSMPUG00000014909)	FTSJ3 (ENSMPUG00000014911)
American mink	MODERN SPECIES	422						ENSNVIG00000000071	PSMD12 (ENSNVIG00000000100)	ENSNVIG00000000131	NOL11 (ENSNVIG00000000139)	BPTF (ENSNVIG00000000233)	ENSNVIG00000003849	ENSNVIG00000003862	SMURF2 (ENSNVIG00000003869)	CEP95 (ENSNVIG00000003929)	DDX5 (ENSNVIG00000003999)	POLG2 (ENSNVIG00000004100) ##22	MILR1 (ENSNVIG00000004144)	ENSNVIG00000004235
Canidae	ANCESTRAL SPECIES	28	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00970000195060	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.d	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654.v	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Canis_lupus	ANCESTRAL SPECIES	47	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000155528.j	ENSGT00940000160720	ENSGT00390000009760	ENSGT00970000195060	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.d.p	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654.v	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Dog	MODERN SPECIES	37	CACNG4 (ENSCAFG00845027500)	CACNG1 (ENSCAFG00845027471)	HELZ (ENSCAFG00845027165)	RPS10 (ENSCAFG00845027106)	PSMD12 (ENSCAFG00845026964)	ENSCAFG00845026899	PITPNC1 (ENSCAFG00845026775)	NOL11 (ENSCAFG00845026677)	ENSCAFG00845026652	BPTF (ENSCAFG00845024868)	ENSCAFG00845024432	KPNA2 (ENSCAFG00845024319)	SMURF2 (ENSCAFG00845023989)	CEP95 (ENSCAFG00845023677)	DDX5 (ENSCAFG00845023472)	POLG2 (ENSCAFG00845023250) ##22	MILR1 (ENSCAFG00845023160)	PECAM1 (ENSCAFG00845022888)	TEX2 (ENSCAFG00845022666)	ERN1 (ENSCAFG00845022274)	ENSCAFG00845022123	ENSCAFG00845021965	SCN4A (ENSCAFG00845021583)	CD79B (ENSCAFG00845021479)	GH1 (ENSCAFG00845021230)	ENSCAFG00845021151	SMARCD2 (ENSCAFG00845020972)	PSMC5 (ENSCAFG00845020751)	FTSJ3 (ENSCAFG00845020647)	DDX42 (ENSCAFG00845020491)	CCDC47 (ENSCAFG00845020200)
Dingo	MODERN SPECIES	54	CACNG1 (ENSCAFG00020026093)	HELZ (ENSCAFG00020026103)	ENSCAFG00020026142	PSMD12 (ENSCAFG00020026150)	ENSCAFG00020026232	PITPNC1 (ENSCAFG00020026233)	NOL11 (ENSCAFG00020026235)	ENSCAFG00020026236	ENSCAFG00020026238	BPTF (ENSCAFG00020026276)	ENSCAFG00020026544	KPNA2 (ENSCAFG00020026546)	SMURF2 (ENSCAFG00020026551)	CEP95 (ENSCAFG00020026560)	DDX5 (ENSCAFG00020026563)	POLG2 (ENSCAFG00020026568) ##22	MILR1 (ENSCAFG00020026569)	PECAM1 (ENSCAFG00020026570)	TEX2 (ENSCAFG00020026572)	ERN1 (ENSCAFG00020026580)	ICAM2 (ENSCAFG00020026585)	SCN4A (ENSCAFG00020026598)	CD79B (ENSCAFG00020026614)	ENSCAFG00020026617	ENSCAFG00020026622	ENSCAFG00020026626	PSMC5 (ENSCAFG00020026629)	FTSJ3 (ENSCAFG00020026630)	DDX42 (ENSCAFG00020026631)	CCDC47 (ENSCAFG00020026633)	STRADA (ENSCAFG00020026634)
Red fox	MODERN SPECIES	31	CACNG5 (ENSVVUG00000006720)	CACNG4 (ENSVVUG00000006712)	CACNG1 (ENSVVUG00000006685)	HELZ (ENSVVUG00000006563)	PSMD12 (ENSVVUG00000006512)	PITPNC1 (ENSVVUG00000006484)	NOL11 (ENSVVUG00000006471)	ENSVVUG00000006465	BPTF (ENSVVUG00000006352)	CUNH17orf58 (ENSVVUG00000006320)	ENSVVUG00000006316	ENSVVUG00000006306	SMURF2 (ENSVVUG00000006289)	CEP95 (ENSVVUG00000006275)	DDX5 (ENSVVUG00000006263)	POLG2 (ENSVVUG00000006258) ##22	ENSVVUG00000006251	PECAM1 (ENSVVUG00000006243)	TEX2 (ENSVVUG00000006237)	ENSVVUG00000006227	ERN1 (ENSVVUG00000006214)	ENSVVUG00000006208	PRR29 (ENSVVUG00000006201)	SCN4A (ENSVVUG00000006165)	CD79B (ENSVVUG00000006154)	ENSVVUG00000006149	ENSVVUG00000006142	ENSVVUG00000006131	PSMC5 (ENSVVUG00000006117)	FTSJ3 (ENSVVUG00000006106)	DDX42 (ENSVVUG00000006095)
Felidae	ANCESTRAL SPECIES	8	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Panthera	ANCESTRAL SPECIES	22	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Panthera_a	ANCESTRAL SPECIES	25	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
lion	MODERN SPECIES	14	CEP112 (ENSPLOG00000011280)	APOH (ENSPLOG00000011423)	PRKCA (ENSPLOG00000011509)	CACNG5 (ENSPLOG00000011571)	CACNG4 (ENSPLOG00000011621)	CACNG1 (ENSPLOG00000011671)	HELZ (ENSPLOG00000011720)	PSMD12 (ENSPLOG00000011781)	PITPNC1 (ENSPLOG00000011948)	NOL11 (ENSPLOG00000012135)	BPTF (ENSPLOG00000012254)	KPNA2 (ENSPLOG00000012513)	SMURF2 (ENSPLOG00000012578)	CEP95 (ENSPLOG00000012686)	DDX5 (ENSPLOG00000013079)	POLG2 (ENSPLOG00000013290) ##22	MILR1 (ENSPLOG00000013307)	PECAM1 (ENSPLOG00000013365)	TEX2 (ENSPLOG00000013513)	ERN1 (ENSPLOG00000013641)	ICAM2 (ENSPLOG00000013683)	PRR29 (ENSPLOG00000013718)	SCN4A (ENSPLOG00000013957)	CD79B (ENSPLOG00000014186)	ENSPLOG00000014249	ENSPLOG00000014430	SMARCD2 (ENSPLOG00000014534)	PSMC5 (ENSPLOG00000014813)	FTSJ3 (ENSPLOG00000015048)	DDX42 (ENSPLOG00000015251)	CCDC47 (ENSPLOG00000015311)
leopard	MODERN SPECIES	48	APOH (ENSPPRG00000024507)	PRKCA (ENSPPRG00000024564)	CACNG5 (ENSPPRG00000024630)	CACNG4 (ENSPPRG00000024669)	CACNG1 (ENSPPRG00000024701)	HELZ (ENSPPRG00000024752)	PSMD12 (ENSPPRG00000024964)	PITPNC1 (ENSPPRG00000024992)	NOL11 (ENSPPRG00000025048)	BPTF (ENSPPRG00000020467)	ENSPPRG00000015896	KPNA2 (ENSPPRG00000015610)	SMURF2 (ENSPPRG00000015063)	CEP95 (ENSPPRG00000014792)	ENSPPRG00000013254	POLG2 (ENSPPRG00000011997) ##22	MILR1 (ENSPPRG00000011701)	PECAM1 (ENSPPRG00000010594)	TEX2 (ENSPPRG00000010004)	ERN1 (ENSPPRG00000009424)	ICAM2 (ENSPPRG00000008863)	PRR29 (ENSPPRG00000007993)	SCN4A (ENSPPRG00000007037)	ENSPPRG00000006458	ENSPPRG00000006321	ENSPPRG00000004499	SMARCD2 (ENSPPRG00000004137)	PSMC5 (ENSPPRG00000003479)	FTSJ3 (ENSPPRG00000003042)	DDX42 (ENSPPRG00000002740)	CCDC47 (ENSPPRG00000002124)
Tiger	MODERN SPECIES	279		PRKCA (ENSPTIG00000007323)	CACNG5 (ENSPTIG00000006955)	CACNG4 (ENSPTIG00000006767)	CACNG1 (ENSPTIG00000006602)	HELZ (ENSPTIG00000020571)	PSMD12 (ENSPTIG00000019994)	PITPNC1 (ENSPTIG00000018899)	NOL11 (ENSPTIG00000018044)	BPTF (ENSPTIG00000016453)	ENSPTIG00000016129	KPNA2 (ENSPTIG00000015611)	SMURF2 (ENSPTIG00000014597)	CEP95 (ENSPTIG00000013020)	DDX5 (ENSPTIG00000010353)	POLG2 (ENSPTIG00000009776) ##22	MILR1 (ENSPTIG00000008926)	PECAM1 (ENSPTIG00000007883)	TEX2 (ENSPTIG00000005203)	ERN1 (ENSPTIG00000000179)	ICAM2 (ENSPTIG00000021615)	PRR29 (ENSPTIG00000020906)	SCN4A (ENSPTIG00000020022)	ENSPTIG00000019704	ENSPTIG00000019005	ENSPTIG00000018553	SMARCD2 (ENSPTIG00000017233)	PSMC5 (ENSPTIG00000012907)	FTSJ3 (ENSPTIG00000012576)	DDX42 (ENSPTIG00000009932)	CCDC47 (ENSPTIG00000006709)
Cat	MODERN SPECIES	245	PRKCA (ENSFCAG00000012011)	CACNG5 (ENSFCAG00000024933)	CACNG4 (ENSFCAG00000038541)	CACNG1 (ENSFCAG00000041973)	HELZ (ENSFCAG00000011711)	PSMD12 (ENSFCAG00000027374)	PITPNC1 (ENSFCAG00000002216)	NOL11 (ENSFCAG00000026399)	BPTF (ENSFCAG00000001929)	ENSFCAG00000046125	ENSFCAG00000052269	KPNA2 (ENSFCAG00000001936)	SMURF2 (ENSFCAG00000027599)	CEP95 (ENSFCAG00000003513)	DDX5 (ENSFCAG00000003512)	POLG2 (ENSFCAG00000003511) ##22	MILR1 (ENSFCAG00000003510)	PECAM1 (ENSFCAG00000003509)	TEX2 (ENSFCAG00000003508)	ERN1 (ENSFCAG00000003507)	ICAM2 (ENSFCAG00000044004)	PRR29 (ENSFCAG00000039072)	SCN4A (ENSFCAG00000003505)	CD79B (ENSFCAG00000040177)	GH1 (ENSFCAG00000003503)	ENSFCAG00000030355	SMARCD2 (ENSFCAG00000003502)	PSMC5 (ENSFCAG00000003501)	FTSJ3 (ENSFCAG00000013983)	DDX42 (ENSFCAG00000003499)	CCDC47 (ENSFCAG00000025674)
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.h.a	ENSGT01050000244891.A.i	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Equus	ANCESTRAL SPECIES		ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.i.e.b	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997	ENSGT00940000158827
Donkey	MODERN SPECIES	4	CACNG5 (ENSEASG00005015910)	CACNG4 (ENSEASG00005026367)	ENSEASG00005035252	CACNG1 (ENSEASG00005038509)	HELZ (ENSEASG00005015902)	PSMD12 (ENSEASG00005015894)	PITPNC1 (ENSEASG00005015886)	NOL11 (ENSEASG00005015876)	BPTF (ENSEASG00005015848)	ENSEASG00005028423	ENSEASG00005015837	ENSEASG00005015832	ENSEASG00005015750	CEP95 (ENSEASG00005015672)	DDX5 (ENSEASG00005014694)	POLG2 (ENSEASG00005038753) ##22	MILR1 (ENSEASG00005025455)	PECAM1 (ENSEASG00005014592)	ENSEASG00005014545	ENSEASG00005031168	ENSEASG00005037099	ERN1 (ENSEASG00005014413)	ICAM2 (ENSEASG00005014356)	ENSEASG00005034344	SCN4A (ENSEASG00005014277)	CD79B (ENSEASG00005014198)	ENSEASG00005014196	SMARCD2 (ENSEASG00005013940)	PSMC5 (ENSEASG00005013892)	FTSJ3 (ENSEASG00005013565)	DDX42 (ENSEASG00005013089)
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.h.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Megabat	MODERN SPECIES	3169														CEP95 (ENSPVAG00000001935)	DDX5 (ENSPVAG00000001932)	POLG2 (ENSPVAG00000001931) ##22	MILR1 (ENSPVAG00000001929)	ENSPVAG00000001927
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.h.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Microbat	MODERN SPECIES	1037	APOH (ENSMLUG00000001586)	ENSMLUG00000028831	PRKCA (ENSMLUG00000001590)	CACNG4 (ENSMLUG00000014188)	CACNG1 (ENSMLUG00000014190)	HELZ (ENSMLUG00000000962)	PSMD12 (ENSMLUG00000013464)	PITPNC1 (ENSMLUG00000013473)	ENSMLUG00000013484	BPTF (ENSMLUG00000002285)	ENSMLUG00000000904	ENSMLUG00000027946	SMURF2 (ENSMLUG00000009576)	CEP95 (ENSMLUG00000009545)	DDX5 (ENSMLUG00000009496)	POLG2 (ENSMLUG00000009469) ##22	MILR1 (ENSMLUG00000009455)	PECAM1 (ENSMLUG00000012364)	TEX2 (ENSMLUG00000016763)	ERN1 (ENSMLUG00000016729)	ICAM2 (ENSMLUG00000014434)
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Suina	ANCESTRAL SPECIES		ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Chacoan peccary	MODERN SPECIES	817	MYL4 (ENSCWAG00000019417)	ITGB3 (ENSCWAG00000019455)	EFCAB3 (ENSCWAG00000019546)	ENSCWAG00000019610	ENSCWAG00000019618	ENSCWAG00000019624	ENSCWAG00000019637	PITPNC1 (ENSCWAG00000019653)	NOL11 (ENSCWAG00000019668)	BPTF (ENSCWAG00000019710)	C17orf58 (ENSCWAG00000020001)	KPNA2 (ENSCWAG00000020030)	SMURF2 (ENSCWAG00000020052)	CEP95 (ENSCWAG00000020113)	DDX5 (ENSCWAG00000020196)	POLG2 (ENSCWAG00000020283) ##22	MILR1 (ENSCWAG00000020309)	PECAM1 (ENSCWAG00000020436)	TEX2 (ENSCWAG00000020466)	ERN1 (ENSCWAG00000020491)	ENSCWAG00000020516	ICAM2 (ENSCWAG00000020528)	ENSCWAG00000008037	SCN4A (ENSCWAG00000008152)	CD79B (ENSCWAG00000008381)	ENSCWAG00000008540	ENSCWAG00000008962	SMARCD2 (ENSCWAG00000009051)	PSMC5 (ENSCWAG00000009262)	FTSJ3 (ENSCWAG00000009420)	DDX42 (ENSCWAG00000009589)
Pig	MODERN SPECIES	3	APOH (ENSSSCG00000040910)	PRKCA (ENSSSCG00000017268)	CACNG5 (ENSSSCG00000036461)	CACNG4 (ENSSSCG00000037202)	CACNG1 (ENSSSCG00000017271)	HELZ (ENSSSCG00000017272)	PSMD12 (ENSSSCG00000017273)	PITPNC1 (ENSSSCG00000017274)	NOL11 (ENSSSCG00000054188)	BPTF (ENSSSCG00000033528)	C17orf58 (ENSSSCG00000032181)	KPNA2 (ENSSSCG00000029005)	SMURF2 (ENSSSCG00000032176)	CEP95 (ENSSSCG00000028925)	DDX5 (ENSSSCG00000032092)	POLG2 (ENSSSCG00000036057) ##22	MILR1 (ENSSSCG00000032612)	PECAM1 (ENSSSCG00000017277)	TEX2 (ENSSSCG00000017278)	ERN1 (ENSSSCG00000039909)	ICAM2 (ENSSSCG00000062259)	PRR29 (ENSSSCG00000056561)	SCN4A (ENSSSCG00000017282)	CD79B (ENSSSCG00000017283)	GH1 (ENSSSCG00000034212)	ENSSSCG00000017285	SMARCD2 (ENSSSCG00000041822)	PSMC5 (ENSSSCG00000017287)	FTSJ3 (ENSSSCG00000017288)	DDX42 (ENSSSCG00000017289)	CCDC47 (ENSSSCG00000028698)
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Camelidae	ANCESTRAL SPECIES	68	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997	ENSGT00940000158827
Arabian camel	MODERN SPECIES	7	APOH (ENSCDRG00005020375)	PRKCA (ENSCDRG00005020399)	CACNG5 (ENSCDRG00005020413)	CACNG4 (ENSCDRG00005020420)	CACNG1 (ENSCDRG00005020428)	HELZ (ENSCDRG00005020443)	PSMD12 (ENSCDRG00005020464)	PITPNC1 (ENSCDRG00005020499)	NOL11 (ENSCDRG00005020519)	BPTF (ENSCDRG00005020556)	ENSCDRG00005020655	KPNA2 (ENSCDRG00005020660)	SMURF2 (ENSCDRG00005020677)	CEP95 (ENSCDRG00005020722)	DDX5 (ENSCDRG00005020755)	POLG2 (ENSCDRG00005020782) ##22	MILR1 (ENSCDRG00005020792)	PECAM1 (ENSCDRG00005020811)	ENSCDRG00005020908	ENSCDRG00005020878	ENSCDRG00005020918	ERN1 (ENSCDRG00005020928)	ENSCDRG00005020945	ENSCDRG00005020954	ENSCDRG00005020964	ENSCDRG00005020977	SCN4A (ENSCDRG00005020983)	ENSCDRG00005021002	GH1 (ENSCDRG00005021034)	ENSCDRG00005021114	SMARCD2 (ENSCDRG00005021130)
Alpaca	MODERN SPECIES	2228													SMURF2 (ENSVPAG00000010761)	CEP95 (ENSVPAG00000010760)	DDX5 (ENSVPAG00000010759)	POLG2 (ENSVPAG00000010757) ##22	ENSVPAG00000010756	ENSVPAG00000010755	TEX2 (ENSVPAG00000010754)	ENSVPAG00000010753
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Cetacea	ANCESTRAL SPECIES	5	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.d	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654.q.a	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Odontoceti	ANCESTRAL SPECIES	16	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.d.b	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654.q.a	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Odontoceti_a	ANCESTRAL SPECIES	14	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.d.b	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654.q.a	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Odontoceti_b	ANCESTRAL SPECIES	16	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00950000182890.D.c.b.a.b.b.b.d.f.b	ENSGT00940000153510.a	ENSGT00940000163468	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.d.b	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00390000016988.a.a.a.a.a.b	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654.q.a	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Monodontidae	ANCESTRAL SPECIES	16	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT01050000244997	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000163468	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.d.b	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00390000016988.a.a.a.a.a.b	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654.q.a	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Beluga whale	MODERN SPECIES	26	ZNF750 (ENSDLEG00000007903)	TBCD (ENSDLEG00000007412)	ENSDLEG00000007330	B3GNTL1 (ENSDLEG00000007311)	METRNL (ENSDLEG00000007300)	ENSDLEG00000007296	PSMD12 (ENSDLEG00000007289)	PITPNC1 (ENSDLEG00000007270)	NOL11 (ENSDLEG00000007257)	BPTF (ENSDLEG00000007143)	C17orf58 (ENSDLEG00000007105)	KPNA2 (ENSDLEG00000007056)	SMURF2 (ENSDLEG00000007008)	CEP95 (ENSDLEG00000006871)	DDX5 (ENSDLEG00000006545)	POLG2 (ENSDLEG00000006509) ##22	MILR1 (ENSDLEG00000006502)	PECAM1 (ENSDLEG00000006438)	TEX2 (ENSDLEG00000006426)	ENSDLEG00000006420	ERN1 (ENSDLEG00000006357)	ICAM2 (ENSDLEG00000006332)	SCN4A (ENSDLEG00000006303)	CD79B (ENSDLEG00000006292)	ENSDLEG00000006283	ENSDLEG00000006281	ENSDLEG00000006275	ENSDLEG00000006269	PSMC5 (ENSDLEG00000006260)	FTSJ3 (ENSDLEG00000006250)	DDX42 (ENSDLEG00000006244)
Narwhal	MODERN SPECIES	316	FN3K (ENSMMNG00015017607)	ZNF750 (ENSMMNG00015017588)	TBCD (ENSMMNG00015017445)	B3GNTL1 (ENSMMNG00015017342)	METRNL (ENSMMNG00015017311)	PSMD12 (ENSMMNG00015017282)	ENSMMNG00015017227	PITPNC1 (ENSMMNG00015017192)	NOL11 (ENSMMNG00015017146)	BPTF (ENSMMNG00015016566)	ENSMMNG00015016348	ENSMMNG00015016273	SMURF2 (ENSMMNG00015016205)	CEP95 (ENSMMNG00015016004)	DDX5 (ENSMMNG00015021168)	POLG2 (ENSMMNG00015021138) ##22	MILR1 (ENSMMNG00015021122)	PECAM1 (ENSMMNG00015021094)	TEX2 (ENSMMNG00015021060)	ENSMMNG00015021037	ERN1 (ENSMMNG00015020996)	ICAM2 (ENSMMNG00015020970)	PRR29 (ENSMMNG00015020935)	SCN4A (ENSMMNG00015020907)	CD79B (ENSMMNG00015020872)	ENSMMNG00015020826	ENSMMNG00015020800	SMARCD2 (ENSMMNG00015020741)	PSMC5 (ENSMMNG00015020703)	FTSJ3 (ENSMMNG00015020678)	DDX42 (ENSMMNG00015020650)
Vaquita	MODERN SPECIES	12	ZNF750 (ENSPSNG00000020572)	TBCD (ENSPSNG00000020467)	ENSPSNG00000020386	METRNL (ENSPSNG00000020354)	ENSPSNG00000020336	PSMD12 (ENSPSNG00000020312)	ENSPSNG00000020273	PITPNC1 (ENSPSNG00000020233)	NOL11 (ENSPSNG00000020197)	BPTF (ENSPSNG00000019612)	C17orf58 (ENSPSNG00000019463)	ENSPSNG00000019429	SMURF2 (ENSPSNG00000019369)	CEP95 (ENSPSNG00000019241)	DDX5 (ENSPSNG00000019077)	POLG2 (ENSPSNG00000019028) ##22	MILR1 (ENSPSNG00000018971)	PECAM1 (ENSPSNG00000018788)	TEX2 (ENSPSNG00000018686)	ENSPSNG00000018645	ERN1 (ENSPSNG00000018609)	ICAM2 (ENSPSNG00000018484)	PRR29 (ENSPSNG00000018362)	SCN4A (ENSPSNG00000018145)	CD79B (ENSPSNG00000017966)	ENSPSNG00000017651	ENSPSNG00000017544	ENSPSNG00000017366	PSMC5 (ENSPSNG00000017340)	FTSJ3 (ENSPSNG00000017247)	DDX42 (ENSPSNG00000017152)
Dolphin	MODERN SPECIES	2288													SMURF2 (ENSTTRG00000008855)	CEP95 (ENSTTRG00000008836)	DDX5 (ENSTTRG00000008793)	POLG2 (ENSTTRG00000008785) ##22	MILR1 (ENSTTRG00000008771)
Sperm whale	MODERN SPECIES	5	ENSPCTG00005017341	FN3KRP (ENSPCTG00005017302)	FN3K (ENSPCTG00005017261)	ZNF750 (ENSPCTG00005017240)	ENSPCTG00005017080	METRNL (ENSPCTG00005016981)	B3GNTL1 (ENSPCTG00005016833)	PSMD12 (ENSPCTG00005016575)	PITPNC1 (ENSPCTG00005016483)	NOL11 (ENSPCTG00005016439)	BPTF (ENSPCTG00005015378)	C14H17orf58 (ENSPCTG00005015232)	SMURF2 (ENSPCTG00005014952)	CEP95 (ENSPCTG00005014475)	DDX5 (ENSPCTG00005013980)	POLG2 (ENSPCTG00005013800) ##22	MILR1 (ENSPCTG00005013669)	ENSPCTG00005013643	PECAM1 (ENSPCTG00005013610)	ENSPCTG00005013578	TEX2 (ENSPCTG00005013445)	ENSPCTG00005013212	ENSPCTG00005013084	SMARCD2 (ENSPCTG00005012899)	PSMC5 (ENSPCTG00005012759)	FTSJ3 (ENSPCTG00005012703)	DDX42 (ENSPCTG00005012358)	CCDC47 (ENSPCTG00005012224)	STRADA (ENSPCTG00005010225)	LIMD2 (ENSPCTG00005010012)	MAP3K3 (ENSPCTG00005009881)
Blue whale	MODERN SPECIES	12	FN3K (ENSBMSG00010021229)	TBCD (ENSBMSG00010021261)	ENSBMSG00010021275	ZNF750 (ENSBMSG00010021286)	ENSBMSG00010021295	METRNL (ENSBMSG00010021306)	PSMD12 (ENSBMSG00010021318)	PITPNC1 (ENSBMSG00010021350)	NOL11 (ENSBMSG00010021388)	BPTF (ENSBMSG00010021472)	C17orf58 (ENSBMSG00010021579)	KPNA2 (ENSBMSG00010021590)	SMURF2 (ENSBMSG00010021607)	CEP95 (ENSBMSG00010021632)	ENSBMSG00010021683	POLG2 (ENSBMSG00010021711) ##22	MILR1 (ENSBMSG00010021717)	ENSBMSG00010021723	PECAM1 (ENSBMSG00010021730)	TEX2 (ENSBMSG00010021748)	ERN1 (ENSBMSG00010021757)	ENSBMSG00010021774	ICAM2 (ENSBMSG00010021780)	PRR29 (ENSBMSG00010021793)	SCN4A (ENSBMSG00010021817)	CD79B (ENSBMSG00010021836)	ENSBMSG00010021865	ENSBMSG00010021912	ENSBMSG00010014546	PSMC5 (ENSBMSG00010014695)	FTSJ3 (ENSBMSG00010014774)
Pecora	ANCESTRAL SPECIES	1	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Yarkand deer	MODERN SPECIES	28	ZNF750 (ENSCHYG00000019158)	TBCD (ENSCHYG00000017773)	B3GNTL1 (ENSCHYG00000017526)	METRNL (ENSCHYG00000017404)	ENSCHYG00000017380	PSMD12 (ENSCHYG00000017208)	PITPNC1 (ENSCHYG00000017096)	NOL11 (ENSCHYG00000017046)	ENSCHYG00000017026	BPTF (ENSCHYG00000015527)	ENSCHYG00000015384	KPNA2 (ENSCHYG00000015232)	SMURF2 (ENSCHYG00000014913)	CEP95 (ENSCHYG00000014467)	DDX5 (ENSCHYG00000014057)	POLG2 (ENSCHYG00000013988) ##22	MILR1 (ENSCHYG00000013943)	PECAM1 (ENSCHYG00000013588)	TEX2 (ENSCHYG00000013398)	ERN1 (ENSCHYG00000013186)	ENSCHYG00000013121	SCN4A (ENSCHYG00000012837)	CD79B (ENSCHYG00000012647)	ENSCHYG00000012299	ENSCHYG00000012234	SMARCD2 (ENSCHYG00000012047)	PSMC5 (ENSCHYG00000011842)	FTSJ3 (ENSCHYG00000011693)	DDX42 (ENSCHYG00000011552)	CCDC47 (ENSCHYG00000011436)	STRADA (ENSCHYG00000010840)
Percora_a	ANCESTRAL SPECIES	2	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654.d	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Bovidae	ANCESTRAL SPECIES	2	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654.d.a	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Caprinae	ANCESTRAL SPECIES	1	ENSGT00390000005730.a.a	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654.d.b.b.a	ENSGT00940000161654.d.b.a	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.i	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Rambouillet Sheep	MODERN SPECIES	2	FN3K (ENSOARG00020010188)	TBCD (ENSOARG00020010313)	ZNF750 (ENSOARG00020010645)	ENSOARG00020010688	METRNL (ENSOARG00020010797)	PSMD12 (ENSOARG00020010931)	PITPNC1 (ENSOARG00020011168)	NOL11 (ENSOARG00020011385)	BPTF (ENSOARG00020011553)	C17orf58 (ENSOARG00020013996)	ENSOARG00020014070	KPNA2 (ENSOARG00020014099)	SMURF2 (ENSOARG00020014152)	CEP95 (ENSOARG00020014316)	DDX5 (ENSOARG00020014410)	POLG2 (ENSOARG00020014670) ##22	MILR1 (ENSOARG00020014728)	PECAM1 (ENSOARG00020014798)	TEX2 (ENSOARG00020014850)	ERN1 (ENSOARG00020015052)	ENSOARG00020015296	ENSOARG00020015462	ENSOARG00020015527	ENSOARG00020015692	PRR29 (ENSOARG00020015847)	SCN4A (ENSOARG00020016096)	CD79B (ENSOARG00020016328)	GH (ENSOARG00020016511)	ENSOARG00020017343	SMARCD2 (ENSOARG00020017438)	PSMC5 (ENSOARG00020017671)
Goat	MODERN SPECIES	10	FN3KRP (ENSCHIG00000024593)	FN3K (ENSCHIG00000020548)	ZNF750 (ENSCHIG00000025909)	TBCD (ENSCHIG00000019855)	B3GNTL1 (ENSCHIG00000008807)	METRNL (ENSCHIG00000020298)	PSMD12 (ENSCHIG00000025493)	PITPNC1 (ENSCHIG00000023010)	NOL11 (ENSCHIG00000025602)	BPTF (ENSCHIG00000012772)	C17orf58 (ENSCHIG00000021851)	ENSCHIG00000026666	SMURF2 (ENSCHIG00000027010)	CEP95 (ENSCHIG00000015865)	DDX5 (ENSCHIG00000011800)	POLG2 (ENSCHIG00000017524) ##22	ENSCHIG00000026501	PECAM1 (ENSCHIG00000018960)	ENSCHIG00000008613	TEX2 (ENSCHIG00000020654)	ERN1 (ENSCHIG00000025852)	ENSCHIG00000019712	ENSCHIG00000026728	SCN4A (ENSCHIG00000021518)	CD79B (ENSCHIG00000016944)	GH1 (ENSCHIG00000011515)	ENSCHIG00000018669	ENSCHIG00000023490	SMARCD2 (ENSCHIG00000011609)	PSMC5 (ENSCHIG00000020396)	FTSJ3 (ENSCHIG00000025676)
Bovinae	ANCESTRAL SPECIES		ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00440000038159.sb	ENSGT00940000163128.a	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654.d.a.b	ENSGT00990000210492	ENSGT00940000161654.d.a.a	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F
Bos	ANCESTRAL SPECIES	1	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT01100000263480.a.a.a.a.b.b.b.a.b	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00440000038159.sb	ENSGT00940000163128.a	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654.d.a.b	ENSGT00940000161654.c	ENSGT00940000161654.d.a.a	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F
Bos_a	ANCESTRAL SPECIES		ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT01100000263480.a.a.a.a.b.b.b.a.b	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00440000038159.sb	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654.c	ENSGT00940000161654.d.a.a	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004
Wild yak	MODERN SPECIES	110	FN3KRP (ENSBMUG00000009449)	ZNF750 (ENSBMUG00000009436)	TBCD (ENSBMUG00000009421)	B3GNTL1 (ENSBMUG00000009380)	METRNL (ENSBMUG00000009363)	PSMD12 (ENSBMUG00000009344)	ENSBMUG00000009321	PITPNC1 (ENSBMUG00000009292)	NOL11 (ENSBMUG00000009255)	BPTF (ENSBMUG00000009032)	ENSBMUG00000008831	KPNA2 (ENSBMUG00000008811)	SMURF2 (ENSBMUG00000008792)	CEP95 (ENSBMUG00000008738)	DDX5 (ENSBMUG00000008708)	POLG2 (ENSBMUG00000008684) ##22	MILR1 (ENSBMUG00000008672)	PECAM1 (ENSBMUG00000008654)	TEX2 (ENSBMUG00000008597)	ERN1 (ENSBMUG00000008575)	ENSBMUG00000008544
Domestic yak	MODERN SPECIES	10	TBCD (ENSBGRG00000006906)	ZNF750 (ENSBGRG00000007506)	B3GNTL1 (ENSBGRG00000007557)	METRNL (ENSBGRG00000007772)	ENSBGRG00000007833	PSMD12 (ENSBGRG00000007870)	PITPNC1 (ENSBGRG00000008106)	ENSBGRG00000008308	NOL11 (ENSBGRG00000008414)	BPTF (ENSBGRG00000008954)	C17orf58 (ENSBGRG00000009998)	KPNA2 (ENSBGRG00000010086)	SMURF2 (ENSBGRG00000010152)	CEP95 (ENSBGRG00000010246)	DDX5 (ENSBGRG00000010365)	POLG2 (ENSBGRG00000010824) ##22	MILR1 (ENSBGRG00000010980)	PECAM1 (ENSBGRG00000011037)	TEX2 (ENSBGRG00000011148)	ERN1 (ENSBGRG00000011837)	ENSBGRG00000012072	ENSBGRG00000012266	SCN4A (ENSBGRG00000012607)	CD79B (ENSBGRG00000012785)	ENSBGRG00000012946	ENSBGRG00000013204	SMARCD2 (ENSBGRG00000013245)	PSMC5 (ENSBGRG00000013405)	FTSJ3 (ENSBGRG00000009060)	DDX42 (ENSBGRG00000009386)	CCDC47 (ENSBGRG00000009483)
Bos_b	ANCESTRAL SPECIES	21	ENSGT00390000005730.a.b	ENSGT00530000063870.a.a	ENSGT00390000017103	ENSGT00390000006933	ENSGT00390000001390.a.a	ENSGT01100000263480.a.a.a.a.b.b.b.a.b	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654.d.b.b.b	ENSGT00940000161654.c	ENSGT00940000161654.d.a.a	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004
Cow	MODERN SPECIES	10	FN3KRP (ENSBTAG00000015390)	ZNF750 (ENSBTAG00000015406)	TBCD (ENSBTAG00000015414)	B3GNTL1 (ENSBTAG00000052072)	METRNL (ENSBTAG00000004787)	PSMD12 (ENSBTAG00000002423)	ENSBTAG00000007354	PITPNC1 (ENSBTAG00000044065)	NOL11 (ENSBTAG00000015951)	BPTF (ENSBTAG00000014598)	C19H17orf58 (ENSBTAG00000053910)	KPNA2 (ENSBTAG00000012225)	SMURF2 (ENSBTAG00000019853)	CEP95 (ENSBTAG00000014002)	DDX5 (ENSBTAG00000018423)	POLG2 (ENSBTAG00000018420) ##22	MILR1 (ENSBTAG00000007409)	PECAM1 (ENSBTAG00000012066)	TEX2 (ENSBTAG00000004723)	ERN1 (ENSBTAG00000016799)	ENSBTAG00000055302	ENSBTAG00000019432	SCN4A (ENSBTAG00000004770)	CD79B (ENSBTAG00000044204)	GH1 (ENSBTAG00000017220)	TCAM1 (ENSBTAG00000024947)	SMARCD2 (ENSBTAG00000021062)	PSMC5 (ENSBTAG00000021061)	FTSJ3 (ENSBTAG00000021060)	DDX42 (ENSBTAG00000021058)	CCDC47 (ENSBTAG00000011834)
Hybrid Bos Indicus	MODERN SPECIES	10	FN3K (ENSBIXG00005007517)	ZNF750 (ENSBIXG00005017103)	TBCD (ENSBIXG00005017341)	B3GNTL1 (ENSBIXG00005017429)	METRNL (ENSBIXG00005017470)	ENSBIXG00005017488	PSMD12 (ENSBIXG00005017579)	PITPNC1 (ENSBIXG00005017646)	NOL11 (ENSBIXG00005002876)	BPTF (ENSBIXG00005018268)	C17orf58 (ENSBIXG00005018359)	KPNA2 (ENSBIXG00005018373)	SMURF2 (ENSBIXG00005018450)	CEP95 (ENSBIXG00005018487)	DDX5 (ENSBIXG00005018609)	POLG2 (ENSBIXG00005018643) ##22	ENSBIXG00005018648	MILR1 (ENSBIXG00005007566)	PECAM1 (ENSBIXG00005018717)	TEX2 (ENSBIXG00005018810)	ERN1 (ENSBIXG00005018957)	ENSBIXG00005018978	ENSBIXG00005018991	ENSBIXG00005019006	ENSBIXG00005019123	PRR29 (ENSBIXG00005019177)	SCN4A (ENSBIXG00005019211)	CD79B (ENSBIXG00005019272)	ENSBIXG00005019402	ENSBIXG00005019432	SMARCD2 (ENSBIXG00005019520)
American bison	MODERN SPECIES	3285	FN3K (ENSBBBG00000014858)	TBCD (ENSBBBG00000014844)	ZNF750 (ENSBBBG00000014805)	B3GNTL1 (ENSBBBG00000014796)	METRNL (ENSBBBG00000014783)	PSMD12 (ENSBBBG00000014773)	PITPNC1 (ENSBBBG00000014733)	ENSBBBG00000014706	NOL11 (ENSBBBG00000003567)	BPTF (ENSBBBG00000014673)	ENSBBBG00000002873	ENSBBBG00000007129	SMURF2 (ENSBBBG00000007494)	CEP95 (ENSBBBG00000003405)	DDX5 (ENSBBBG00000014507)	POLG2 (ENSBBBG00000002882) ##22	MILR1 (ENSBBBG00000014459)	PECAM1 (ENSBBBG00000014443)	TEX2 (ENSBBBG00000003328)	ERN1 (ENSBBBG00000001408)	ENSBBBG00000014382	ENSBBBG00000009119	SCN4A (ENSBBBG00000003281)	ENSBBBG00000014306	CD79B (ENSBBBG00000014300)	ENSBBBG00000014281	ENSBBBG00000003240	SMARCD2 (ENSBBBG00000014270)	PSMC5 (ENSBBBG00000014258)	FTSJ3 (ENSBBBG00000003224)	DDX42 (ENSBBBG00000014209)
Siberian musk deer	MODERN SPECIES	1210	FN3KRP (ENSMMSG00000022949)	FN3K (ENSMMSG00000022941)	ZNF750 (ENSMMSG00000022937)	TBCD (ENSMMSG00000022880)	B3GNTL1 (ENSMMSG00000022843)	METRNL (ENSMMSG00000022827)	PSMD12 (ENSMMSG00000022799)	ENSMMSG00000022779	NOL11 (ENSMMSG00000022761)	BPTF (ENSMMSG00000022444)	C17orf58 (ENSMMSG00000022394)	KPNA2 (ENSMMSG00000022378)	SMURF2 (ENSMMSG00000022347)	CEP95 (ENSMMSG00000022233)	DDX5 (ENSMMSG00000022147)	POLG2 (ENSMMSG00000022104) ##22	ENSMMSG00000022065	PECAM1 (ENSMMSG00000022011)	TEX2 (ENSMMSG00000021971)	ERN1 (ENSMMSG00000021903)	ICAM2 (ENSMMSG00000021886)	ENSMMSG00000021858	SCN4A (ENSMMSG00000021789)	CD79B (ENSMMSG00000021730)	ENSMMSG00000021583	ENSMMSG00000021561	SMARCD2 (ENSMMSG00000021396)	PSMC5 (ENSMMSG00000021252)	FTSJ3 (ENSMMSG00000021153)	DDX42 (ENSMMSG00000021083)	CCDC47 (ENSMMSG00000021028)
Eulipotyphla	ANCESTRAL SPECIES	272													ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22
Common shrew	MODERN SPECIES	2520													SMURF2 (ENSSARG00000007857)	CEP95 (ENSSARG00000007833)	ENSSARG00000007813	POLG2 (ENSSARG00000007760) ##22
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Primates	ANCESTRAL SPECIES	3	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Lemuriformes_a	ANCESTRAL SPECIES	97									ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Greater bamboo lemur	MODERN SPECIES	677									NOL11 (ENSPSMG00000013432)	BPTF (ENSPSMG00000013295)	ENSPSMG00000013202	KPNA2 (ENSPSMG00000013050)	SMURF2 (ENSPSMG00000012908)	CEP95 (ENSPSMG00000012769)	DDX5 (ENSPSMG00000012568)	POLG2 (ENSPSMG00000012406) ##22	MILR1 (ENSPSMG00000012392)	PECAM1 (ENSPSMG00000012343)	TEX2 (ENSPSMG00000012294)	ERN1 (ENSPSMG00000012257)	ICAM2 (ENSPSMG00000012223)	PRR29 (ENSPSMG00000012203)	SCN4A (ENSPSMG00000012187)	ENSPSMG00000012166	ENSPSMG00000012159	ENSPSMG00000012153	SMARCD2 (ENSPSMG00000012129)	PSMC5 (ENSPSMG00000012043)	FTSJ3 (ENSPSMG00000011944)	DDX42 (ENSPSMG00000011866)	CCDC47 (ENSPSMG00000011832)
Coquerels sifaka	MODERN SPECIES	120										ENSPCOG00000017861	ENSPCOG00000012747	ENSPCOG00000012798	SMURF2 (ENSPCOG00000016465)	ENSPCOG00000024132	DDX5 (ENSPCOG00000023732)	POLG2 (ENSPCOG00000024674) ##22	MILR1 (ENSPCOG00000014221)	PECAM1 (ENSPCOG00000008535)	TEX2 (ENSPCOG00000016518)	ERN1 (ENSPCOG00000023564)	ICAM2 (ENSPCOG00000014373)	PRR29 (ENSPCOG00000027180)	SCN4A (ENSPCOG00000014635)	ENSPCOG00000020550	ENSPCOG00000017753	SMARCD2 (ENSPCOG00000019458)	PSMC5 (ENSPCOG00000024095)	FTSJ3 (ENSPCOG00000023921)	DDX42 (ENSPCOG00000001559)	CCDC47 (ENSPCOG00000018115)	STRADA (ENSPCOG00000016323)
Mouse lemur	MODERN SPECIES	7	CACNG5 (ENSMICG00000013293)	CACNG4 (ENSMICG00000034646)	CACNG1 (ENSMICG00000042613)	HELZ (ENSMICG00000013321)	PSMD12 (ENSMICG00000027720)	PITPNC1 (ENSMICG00000012923)	NOL11 (ENSMICG00000017576)	BPTF (ENSMICG00000012004)	ENSMICG00000012046	ENSMICG00000043805	ENSMICG00000011357	ENSMICG00000014521	SMURF2 (ENSMICG00000009294)	CEP95 (ENSMICG00000009285)	DDX5 (ENSMICG00000009267)	POLG2 (ENSMICG00000046718) ##22	MILR1 (ENSMICG00000009257)	PECAM1 (ENSMICG00000032975)	ENSMICG00000036867	TEX2 (ENSMICG00000005725)	ERN1 (ENSMICG00000010050)	ICAM2 (ENSMICG00000042703)	PRR29 (ENSMICG00000028288)	SCN4A (ENSMICG00000010028)	CD79B (ENSMICG00000031356)	ENSMICG00000010016	ENSMICG00000046974	SMARCD2 (ENSMICG00000010005)	PSMC5 (ENSMICG00000009989)	FTSJ3 (ENSMICG00000045996)	ENSMICG00000031564
Bushbaby	MODERN SPECIES	133	ENSOGAG00000003281	APOH (ENSOGAG00000013622)	PRKCA (ENSOGAG00000013623)	CACNG5 (ENSOGAG00000013630)	CACNG4 (ENSOGAG00000013634)	CACNG1 (ENSOGAG00000033231)	HELZ (ENSOGAG00000002482)	PSMD12 (ENSOGAG00000011430)	PITPNC1 (ENSOGAG00000011431)	NOL11 (ENSOGAG00000000668)	BPTF (ENSOGAG00000007027)	ENSOGAG00000007035	ENSOGAG00000027672	SMURF2 (ENSOGAG00000015369)	CEP95 (ENSOGAG00000015360)	POLG2 (ENSOGAG00000015348) ##22	MILR1 (ENSOGAG00000014594)	PECAM1 (ENSOGAG00000029685)	TEX2 (ENSOGAG00000003872)	ERN1 (ENSOGAG00000003863)	ICAM2 (ENSOGAG00000003862)	SCN4A (ENSOGAG00000008312)	ENSOGAG00000032862	SMARCD2 (ENSOGAG00000008302)	PSMC5 (ENSOGAG00000008296)	FTSJ3 (ENSOGAG00000032479)	DDX42 (ENSOGAG00000006872)	CCDC47 (ENSOGAG00000006869)	STRADA (ENSOGAG00000006867)	LIMD2 (ENSOGAG00000026787)	MAP3K3 (ENSOGAG00000006861)
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Tarsier	MODERN SPECIES	4851															DDX5 (ENSTSYG00000012149)	POLG2 (ENSTSYG00000005984) ##22	PECAM1 (ENSTSYG00000037510)	ENSTSYG00000034311	TEX2 (ENSTSYG00000013538)	ERN1 (ENSTSYG00000029092)	ICAM2 (ENSTSYG00000036454)	ENSTSYG00000032388
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a.e	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.k	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k	ENSGT00950000182818.D.l	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00940000156104.B	ENSGT00940000157228	ENSGT00950000183073.b.o.a	ENSGT00940000154708.eb.b	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000170309	ENSGT00940000156505	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00910000147565	ENSGT00940000154966.n	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.b.a	ENSGT00950000182818.D.k.d.b.b.a	ENSGT00950000182818.D.k.d.a.b	ENSGT00950000182818.D.l	ENSGT00950000182818.D.k.d.b.b.b	ENSGT00940000163726	ENSGT00940000158654
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00940000157228	ENSGT00950000183073.b.o.a	ENSGT00940000154708.eb.b	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000170309	ENSGT00940000156505	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00940000155575.a	ENSGT00910000147565	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00510000046986.m.b	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.a.a	ENSGT00950000182818.D.k.d.b.b.a	ENSGT00950000182818.D.k.d.a.b	ENSGT00950000182818.D.l	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F.s
Hominidae	ANCESTRAL SPECIES	16	ENSGT00940000156104.B	ENSGT00940000157228	ENSGT00950000183073.b.o.a	ENSGT00940000154708.eb.b	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000156505	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00940000155575.a	ENSGT00910000147565	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00510000046986.m.b	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.a.a	ENSGT00950000182818.D.k.d.b.b.a	ENSGT00950000182818.D.k.d.a.b	ENSGT00950000182818.D.l	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F.s
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000156104.B	ENSGT00940000157228	ENSGT00950000183073.b.o.a	ENSGT00940000154708.eb.b	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000156505	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00940000155575.a	ENSGT00910000147565	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00510000046986.m.b	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.a.a	ENSGT00950000182818.D.k.d.b.b.a	ENSGT00950000182818.D.k.d.a.b	ENSGT00950000182818.D.l	ENSGT00940000158654	ENSGT01020000230346.F.s	ENSGT00550000075004
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT01050000244893.c.b.b	ENSGT01050000244961.a.b	ENSGT01010000222722	ENSGT00940000156104.B	ENSGT00940000157228	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000156505	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00910000147565	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00510000046986.m.b	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.a.a	ENSGT00950000182818.D.k.d.b.b.a.d	ENSGT00950000182818.D.k.d.a.b	ENSGT00950000182818.D.k.d.b.b.a.c	ENSGT00940000158654	ENSGT01020000230346.F.s	ENSGT00550000075004
Pan	ANCESTRAL SPECIES	3	ENSGT01010000222722	ENSGT00940000156104.B	ENSGT00940000157228	ENSGT00950000183073.b.o.a	ENSGT00940000154708.eb.b	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000156505	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00910000147565	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00510000046986.m.b	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.a.a	ENSGT00940000158654	ENSGT01020000230346.F.s	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997	ENSGT00940000158827
Chimpanzee	MODERN SPECIES	8	ENSPTRG00000045647	PRKCA (ENSPTRG00000009557)	APOH (ENSPTRG00000009556)	ENSPTRG00000051073	ENSPTRG00000046542	CEP112 (ENSPTRG00000009555)	AXIN2 (ENSPTRG00000009554)	RGS9 (ENSPTRG00000009552)	GNA13 (ENSPTRG00000009551)	ENSPTRG00000051444	ENSPTRG00000047785	SMURF2 (ENSPTRG00000009546)	CEP95 (ENSPTRG00000009544)	DDX5 (ENSPTRG00000009543)	ENSPTRG00000043332	POLG2 (ENSPTRG00000009541) ##22	MILR1 (ENSPTRG00000009539)	PECAM1 (ENSPTRG00000009538)	TEX2 (ENSPTRG00000009537)	ERN1 (ENSPTRG00000009535)	ICAM2 (ENSPTRG00000009534)	PRR29 (ENSPTRG00000038752)	SCN4A (ENSPTRG00000009532)	CD79B (ENSPTRG00000009531)	GH1 (ENSPTRG00000034560)	ENSPTRG00000034212	GH2 (ENSPTRG00000034209)	SMARCD2 (ENSPTRG00000009526)	PSMC5 (ENSPTRG00000009525)	FTSJ3 (ENSPTRG00000009524)	DDX42 (ENSPTRG00000009523)
Bonobo	MODERN SPECIES	8	PRKCA (ENSPPAG00000031670)	APOH (ENSPPAG00000040555)	ENSPPAG00000043393	ENSPPAG00000039251	CEP112 (ENSPPAG00000043699)	AXIN2 (ENSPPAG00000034130)	RGS9 (ENSPPAG00000029490)	ENSPPAG00000012011	ENSPPAG00000021786	ENSPPAG00000034259	ENSPPAG00000031401	SMURF2 (ENSPPAG00000042884)	CEP95 (ENSPPAG00000027687)	DDX5 (ENSPPAG00000042005)	ENSPPAG00000035454	POLG2 (ENSPPAG00000033268) ##22	MILR1 (ENSPPAG00000038263)	PECAM1 (ENSPPAG00000017648)	TEX2 (ENSPPAG00000043284)	ERN1 (ENSPPAG00000031054)	ICAM2 (ENSPPAG00000036010)	ENSPPAG00000024924	SCN4A (ENSPPAG00000038463)	CD79B (ENSPPAG00000040987)	GH1 (ENSPPAG00000041456)	SMARCD2 (ENSPPAG00000035296)	PSMC5 (ENSPPAG00000043609)	FTSJ3 (ENSPPAG00000027297)	DDX42 (ENSPPAG00000007496)	CCDC47 (ENSPPAG00000040139)	STRADA (ENSPPAG00000029424)
Human	MODERN SPECIES	8	PSMD12 (ENSG00000197170)	HELZ (ENSG00000198265)	CACNG1 (ENSG00000108878)	CACNG4 (ENSG00000075461)	CACNG5 (ENSG00000075429)	PRKCA (ENSG00000154229)	APOH (ENSG00000091583)	CEP112 (ENSG00000154240)	AXIN2 (ENSG00000168646)	RGS9 (ENSG00000108370)	GNA13 (ENSG00000120063)	LRRC37A3 (ENSG00000176809)	SMURF2 (ENSG00000108854)	CEP95 (ENSG00000258890)	DDX5 (ENSG00000108654)	POLG2 (ENSG00000256525) ##22	MILR1 (ENSG00000271605)	PECAM1 (ENSG00000261371)	TEX2 (ENSG00000136478)	ERN1 (ENSG00000178607)	ICAM2 (ENSG00000108622)	PRR29 (ENSG00000224383)	SCN4A (ENSG00000007314)	CD79B (ENSG00000007312)	ENSG00000285947	GH1 (ENSG00000259384)	CSHL1 (ENSG00000204414)	CSH1 (ENSG00000136488)	GH2 (ENSG00000136487)	CSH2 (ENSG00000213218)	SMARCD2 (ENSG00000108604)
Gorilla	MODERN SPECIES	18	CEP112 (ENSGGOG00000015686)	AXIN2 (ENSGGOG00000003974)	RGS9 (ENSGGOG00000015530)	GNA13 (ENSGGOG00000010062)	ENSGGOG00000043982	ENSGGOG00000026387	ENSGGOG00000009759	ENSGGOG00000036797	ENSGGOG00000040775	ENSGGOG00000037313	ENSGGOG00000043840	ENSGGOG00000043150	SMURF2 (ENSGGOG00000007009)	CEP95 (ENSGGOG00000015429)	DDX5 (ENSGGOG00000015418)	POLG2 (ENSGGOG00000015412) ##22	MILR1 (ENSGGOG00000044165)	PECAM1 (ENSGGOG00000011538)	TEX2 (ENSGGOG00000011453)	ERN1 (ENSGGOG00000006532)	ICAM2 (ENSGGOG00000014108)	ENSGGOG00000028409	SCN4A (ENSGGOG00000012527)	CD79B (ENSGGOG00000012519)	GH2 (ENSGGOG00000040075)	GH-N (ENSGGOG00000014480)	ENSGGOG00000014880	SMARCD2 (ENSGGOG00000006814)	PSMC5 (ENSGGOG00000006803)	FTSJ3 (ENSGGOG00000006794)	DDX42 (ENSGGOG00000006779)
Orangutan	MODERN SPECIES	8	CACNG1 (ENSPPYG00000008563)	CACNG4 (ENSPPYG00000039878)	CACNG5 (ENSPPYG00000008560)	ENSPPYG00000008559	PRKCA (ENSPPYG00000008557)	APOH (ENSPPYG00000008556)	CEP112 (ENSPPYG00000008555)	AXIN2 (ENSPPYG00000008554)	RGS9 (ENSPPYG00000008553)	GNA13 (ENSPPYG00000030702)	ENSPPYG00000031676	ENSPPYG00000036066	SMURF2 (ENSPPYG00000008549)	CEP95 (ENSPPYG00000008548)	DDX5 (ENSPPYG00000008547)	POLG2 (ENSPPYG00000008546) ##22	MILR1 (ENSPPYG00000008545)	PECAM1 (ENSPPYG00000008544)	TEX2 (ENSPPYG00000008542)	ERN1 (ENSPPYG00000008539)	ENSPPYG00000008538	ENSPPYG00000041760	SCN4A (ENSPPYG00000008537)	CD79B (ENSPPYG00000008536)	GH1 (ENSPPYG00000008535)	ENSPPYG00000033578	ENSPPYG00000040848	SMARCD2 (ENSPPYG00000008534)	PSMC5 (ENSPPYG00000008533)	FTSJ3 (ENSPPYG00000008532)	DDX42 (ENSPPYG00000008531)
Gibbon	MODERN SPECIES	9	CEP112 (ENSNLEG00000014821)	ENSNLEG00000031595	ENSNLEG00000013489	ENSNLEG00000035505	ENSNLEG00000032661	ENSNLEG00000014833	RGS9 (ENSNLEG00000014838)	GNA13 (ENSNLEG00000014875)	ENSNLEG00000028703	ENSNLEG00000030835	ENSNLEG00000035637	SMURF2 (ENSNLEG00000014881)	CEP95 (ENSNLEG00000014905)	DDX5 (ENSNLEG00000014929)	ENSNLEG00000035786	POLG2 (ENSNLEG00000014951) ##22	MILR1 (ENSNLEG00000014968)	PECAM1 (ENSNLEG00000014972)	TEX2 (ENSNLEG00000015058)	ERN1 (ENSNLEG00000015074)	ICAM2 (ENSNLEG00000015088)	ENSNLEG00000028222	SCN4A (ENSNLEG00000015100)	CD79B (ENSNLEG00000015121)	GH1 (ENSNLEG00000004073)	ENSNLEG00000015134	GH2 (ENSNLEG00000036173)	MRPL33 (ENSNLEG00000015281)	ENSNLEG00000027938	RBKS (ENSNLEG00000015285)	ENSNLEG00000015290
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00940000157228	ENSGT00950000183073.b.o.a	ENSGT00510000047030.xb.a.c.a	ENSGT00940000154708.eb.b	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000156505	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00910000147565	ENSGT00940000154966.n	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.b.a	ENSGT00950000182818.D.k.d.b.b.a.a	ENSGT00950000182818.D.k.d.a.b	ENSGT00950000182818.D.k.d.b.b.a.b	ENSGT00950000182818.D.k.d.b.b.b.b	ENSGT00950000182818.D.k.d.b.b.b.a.a	ENSGT00940000163726
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00940000156104.B	ENSGT00940000157228	ENSGT00950000183073.b.o.a	ENSGT00510000047030.xb.a.c.a	ENSGT00940000154708.eb.b	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000156505	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00390000002376.g.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.b.a.a	ENSGT00950000182818.D.k.d.b.b.a.a	ENSGT00950000182818.D.k.d.b.b.a.b	ENSGT00950000182818.D.k.d.b.b.b.b	ENSGT00950000182818.D.k.d.b.b.b.a.a	ENSGT00940000163726	ENSGT00940000158654
Vervet Monkey	MODERN SPECIES	7	HELZ (ENSCSAG00000004152)	CACNG1 (ENSCSAG00000004133)	CACNG4 (ENSCSAG00000004131)	CACNG5 (ENSCSAG00000004125)	PRKCA (ENSCSAG00000004109)	APOH (ENSCSAG00000004104)	CEP112 (ENSCSAG00000004099)	AXIN2 (ENSCSAG00000004096)	RGS9 (ENSCSAG00000004083)	GNA13 (ENSCSAG00000004040)	ENSCSAG00000004037	ENSCSAG00000019015	SMURF2 (ENSCSAG00000004032)	CEP95 (ENSCSAG00000004029)	DDX5 (ENSCSAG00000004022)	POLG2 (ENSCSAG00000004013) ##22	MILR1 (ENSCSAG00000004008)	PECAM1 (ENSCSAG00000004001)	TEX2 (ENSCSAG00000003996)	ERN1 (ENSCSAG00000003990)	ICAM2 (ENSCSAG00000003987)	PRR29 (ENSCSAG00000003985)	SCN4A (ENSCSAG00000003980)	CD79B (ENSCSAG00000003963)	ENSCSAG00000003961	ENSCSAG00000003958	ENSCSAG00000003954	ENSCSAG00000003948	ENSCSAG00000003942	SMARCD2 (ENSCSAG00000003931)	PSMC5 (ENSCSAG00000003923)
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00940000156104.B	ENSGT00940000157228	ENSGT00950000183073.b.o.a	ENSGT00510000047030.xb.a.c.a	ENSGT00940000154708.eb.b	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000156505	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00390000002376.g.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00910000147253	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.b.a.a	ENSGT00950000182818.D.k.d.b.b.a.a	ENSGT00950000182818.D.k.c.a	ENSGT00950000182818.D.k.d.b.b.a.b	ENSGT00950000182818.D.k.d.b.b.b.b	ENSGT00950000182818.D.k.d.b.b.b.a.a
Macaca	ANCESTRAL SPECIES	4	ENSGT01050000244893.c.b.b	ENSGT01050000244961.a.b	ENSGT01010000222722.d	ENSGT00940000156104.B	ENSGT00940000157228	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000156505	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00390000002376.g.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00910000147253	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.b.a.a	ENSGT00950000182818.D.k.d.b.b.a.a	ENSGT00950000182818.D.k.c.a	ENSGT00950000182818.D.k.d.b.b.a.b	ENSGT00950000182818.D.k.d.b.b.b.b	ENSGT00950000182818.D.k.d.b.b.b.a.a
Pig-tailed macaque	MODERN SPECIES	432	ENSMNEG00000033718	ENSMNEG00000042862	CEP112 (ENSMNEG00000030004)	AXIN2 (ENSMNEG00000000060)	RGS9 (ENSMNEG00000029308)	ENSMNEG00000030134	GNA13 (ENSMNEG00000040026)	ENSMNEG00000028688	ENSMNEG00000041731	ENSMNEG00000040230	ENSMNEG00000035347	ENSMNEG00000027520	SMURF2 (ENSMNEG00000034193)	CEP95 (ENSMNEG00000031411)	DDX5 (ENSMNEG00000039559)	POLG2 (ENSMNEG00000041525) ##22	MILR1 (ENSMNEG00000028270)	PECAM1 (ENSMNEG00000037321)	ENSMNEG00000039839	TEX2 (ENSMNEG00000004133)	ERN1 (ENSMNEG00000044337)	PRR29 (ENSMNEG00000014425)	ICAM2 (ENSMNEG00000039115)	SCN4A (ENSMNEG00000033583)	CD79B (ENSMNEG00000019354)	ENSMNEG00000043943	ENSMNEG00000037246	ENSMNEG00000043398	ENSMNEG00000037135
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00390000007786.a	ENSGT01050000244893.c.b.b	ENSGT01050000244961.a.b	ENSGT00940000156104.B	ENSGT00940000157228	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000156505	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT01050000244891.A.k.j.b.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00910000147253	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.b.b.a.a	ENSGT00950000182818.D.k.d.b.b.a.b.a	ENSGT00950000182818.D.k.c.a	ENSGT00950000182818.D.k.d.b.b.a.b.b	ENSGT00950000182818.D.k.d.b.b.b.b	ENSGT00950000182818.D.k.d.b.b.b.a.a
Crab-eating macaque	MODERN SPECIES	7	ENSMFAG00000057665	PRKCA (ENSMFAG00000027291)	ENSMFAG00000032782	CEP112 (ENSMFAG00000038512)	AXIN2 (ENSMFAG00000000055)	RGS9 (ENSMFAG00000035462)	ENSMFAG00000001356	GNA13 (ENSMFAG00000001747)	ENSMFAG00000041682	ENSMFAG00000007530	ENSMFAG00000037747	ENSMFAG00000051834	SMURF2 (ENSMFAG00000045822)	CEP95 (ENSMFAG00000037980)	DDX5 (ENSMFAG00000026858)	POLG2 (ENSMFAG00000002805) ##22	MILR1 (ENSMFAG00000037510)	PECAM1 (ENSMFAG00000036717)	ENSMFAG00000002301	TEX2 (ENSMFAG00000033866)	ERN1 (ENSMFAG00000040147)	PRR29 (ENSMFAG00000038365)	SCN4A (ENSMFAG00000035414)	ICAM2 (ENSMFAG00000033733)	CD79B (ENSMFAG00000046403)	ENSMFAG00000011106	ENSMFAG00000034224	ENSMFAG00000052890	ENSMFAG00000032672	ENSMFAG00000056288	ENSMFAG00000061116
Rhesus	MODERN SPECIES	7	CACNG5 (ENSMMUG00000052025)	PRKCA (ENSMMUG00000018378)	ENSMMUG00000050517	APOH (ENSMMUG00000015120)	CEP112 (ENSMMUG00000005637)	ENSMMUG00000051240	AXIN2 (ENSMMUG00000060015)	RGS9 (ENSMMUG00000014521)	ENSMMUG00000040105	GNA13 (ENSMMUG00000016371)	ENSMMUG00000018256	SMURF2 (ENSMMUG00000009461)	ENSMMUG00000063689	CEP95 (ENSMMUG00000009459)	DDX5 (ENSMMUG00000009463)	POLG2 (ENSMMUG00000009464) ##22	MILR1 (ENSMMUG00000006317)	ENSMMUG00000060875	ENSMMUG00000059400	PECAM1 (ENSMMUG00000011809)	TEX2 (ENSMMUG00000017521)	ERN1 (ENSMMUG00000015185)	ICAM2 (ENSMMUG00000050536)	PRR29 (ENSMMUG00000047925)	SCN4A (ENSMMUG00000000580)	CD79B (ENSMMUG00000041327)	ENSMMUG00000000578	ENSMMUG00000011358	CSH2 (ENSMMUG00000023707)	CSH3 (ENSMMUG00000057492)	GHV (ENSMMUG00000039847)
Cercopithecinae_b	ANCESTRAL SPECIES	19	ENSGT01010000222722.d	ENSGT00940000156104.B	ENSGT00940000157228	ENSGT00950000183073.b.o.a	ENSGT00510000047030.xb.a.c.a	ENSGT00390000006544	ENSGT00940000157338	ENSGT00940000156505	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00390000002376.g.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00910000147253	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.b.a.a	ENSGT00950000182818.D.k.d.b.b.a.a	ENSGT00950000182818.D.k.c.a	ENSGT00950000182818.D.k.d.b.b.a.b	ENSGT00950000182818.D.k.d.b.b.b.b	ENSGT00950000182818.D.k.d.b.b.b.a.a
Olive baboon	MODERN SPECIES	8	APOH (ENSPANG00000020563)	CEP112 (ENSPANG00000020608)	AXIN2 (ENSPANG00000020613)	ENSPANG00000048052	RGS9 (ENSPANG00000020610)	ENSPANG00000034645	GNA13 (ENSPANG00000020614)	ENSPANG00000032609	ENSPANG00000038295	ENSPANG00000020623	ENSPANG00000017339	SMURF2 (ENSPANG00000033901)	ENSPANG00000035326	CEP95 (ENSPANG00000020618)	DDX5 (ENSPANG00000020701)	POLG2 (ENSPANG00000020707) ##22	MILR1 (ENSPANG00000020703)	PECAM1 (ENSPANG00000020734)	TEX2 (ENSPANG00000020736)	ERN1 (ENSPANG00000020738)	ICAM2 (ENSPANG00000020740)	PRR29 (ENSPANG00000020742)	SCN4A (ENSPANG00000020724)	CD79B (ENSPANG00000044531)	ENSPANG00000020720	ENSPANG00000031798	SMARCD2 (ENSPANG00000020977)	PSMC5 (ENSPANG00000020980)	FTSJ3 (ENSPANG00000020978)	DDX42 (ENSPANG00000020990)	CCDC47 (ENSPANG00000021010)
Cercopithecinae_d	ANCESTRAL SPECIES	122													ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00910000147253	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.b.a.a	ENSGT00950000182818.D.k.d.b.b.a.a	ENSGT00950000182818.D.k.c.a	ENSGT00950000182818.D.k.d.b.b.a.b	ENSGT00950000182818.D.k.d.b.b.b.b	ENSGT00950000182818.D.k.d.b.b.b.a.a
Sooty mangabey	MODERN SPECIES	163													SMURF2 (ENSCATG00000037035)	CEP95 (ENSCATG00000035381)	DDX5 (ENSCATG00000040784)	POLG2 (ENSCATG00000029013) ##22	MILR1 (ENSCATG00000035870)	PECAM1 (ENSCATG00000027274)	TEX2 (ENSCATG00000039120)	ENSCATG00000032847	ERN1 (ENSCATG00000040819)	ICAM2 (ENSCATG00000024920)	PRR29 (ENSCATG00000039931)	SCN4A (ENSCATG00000034229)	CD79B (ENSCATG00000040467)	ENSCATG00000039856	ENSCATG00000007350	ENSCATG00000032539	SMARCD2 (ENSCATG00000042981)	PSMC5 (ENSCATG00000033908)	FTSJ3 (ENSCATG00000018510)
Drill	MODERN SPECIES	1226													SMURF2 (ENSMLEG00000015053)	CEP95 (ENSMLEG00000035306)	DDX5 (ENSMLEG00000041700)	POLG2 (ENSMLEG00000039506) ##22	MILR1 (ENSMLEG00000042819)	PECAM1 (ENSMLEG00000032770)	TEX2 (ENSMLEG00000042917)	ENSMLEG00000034536	ERN1 (ENSMLEG00000033739)	ICAM2 (ENSMLEG00000036692)	PRR29 (ENSMLEG00000035264)	SCN4A (ENSMLEG00000039094)	CD79B (ENSMLEG00000042425)	ENSMLEG00000015292	ENSMLEG00000034387	ENSMLEG00000032372	ENSMLEG00000030063	ENSMLEG00000034404	ENSMLEG00000041013
Rhinopithecus	ANCESTRAL SPECIES	60	ENSGT00390000006544.a	ENSGT00390000006544.b	ENSGT00940000157338	ENSGT00940000156505	ENSGT01030000234542.b.a.a.a.b.a.b.d	ENSGT00940000157054	ENSGT00530000063996.a.f	ENSGT00910000147565.d	ENSGT00940000155575.c	ENSGT01050000244891.A.k	ENSGT00940000154966.n	ENSGT00390000005732.u.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.d.b.a	ENSGT00950000182818.D.k.d.b.b.a.a	ENSGT00950000182818.D.k.d.a.b	ENSGT00950000182818.D.k.d.b.b.a.b	ENSGT00950000182818.D.k.d.b.b.b.b	ENSGT00950000182818.D.k.d.b.b.b.a.a	ENSGT00940000158654
Golden snub-nosed monkey	MODERN SPECIES	2193	CEP112 (ENSRROG00000030467)	ENSRROG00000031012	ENSRROG00000040739	AXIN2 (ENSRROG00000031000)	RGS9 (ENSRROG00000034205)	ENSRROG00000042244	GNA13 (ENSRROG00000025979)	ENSRROG00000039232	ENSRROG00000036007	ENSRROG00000030320	ENSRROG00000029800	ENSRROG00000043193	SMURF2 (ENSRROG00000014770)	CEP95 (ENSRROG00000035634)	DDX5 (ENSRROG00000000127)	POLG2 (ENSRROG00000028560) ##22	MILR1 (ENSRROG00000032207)	PECAM1 (ENSRROG00000023263)	TEX2 (ENSRROG00000043004)	ERN1 (ENSRROG00000017577)	ICAM2 (ENSRROG00000037894)	PRR29 (ENSRROG00000023151)	SCN4A (ENSRROG00000035812)	CD79B (ENSRROG00000033239)	ENSRROG00000033351	ENSRROG00000045412	GH2 (ENSRROG00000032892)	ENSRROG00000027808	ENSRROG00000032657	ENSRROG00000042510	SMARCD2 (ENSRROG00000030291)
Black snub-nosed monkey	MODERN SPECIES	717										ENSRBIG00000028915	ENSRBIG00000034341	ENSRBIG00000037784	SMURF2 (ENSRBIG00000006448)	CEP95 (ENSRBIG00000030288)	DDX5 (ENSRBIG00000038867)	POLG2 (ENSRBIG00000036171) ##22	ENSRBIG00000023938	MILR1 (ENSRBIG00000032573)	PECAM1 (ENSRBIG00000038586)	TEX2 (ENSRBIG00000040556)	ERN1 (ENSRBIG00000033096)	ICAM2 (ENSRBIG00000029827)	PRR29 (ENSRBIG00000036292)	SCN4A (ENSRBIG00000024700)	CD79B (ENSRBIG00000034377)	ENSRBIG00000043520	ENSRBIG00000008245	ENSRBIG00000043875	ENSRBIG00000044421	GH2 (ENSRBIG00000040186)	ENSRBIG00000028066
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a.e	ENSGT00940000163128.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.k.a.a	ENSGT01050000244891.A.k.b	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.b	ENSGT00950000182818.D.k.a.b	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004.y	ENSGT00940000156559
Cebidae	ANCESTRAL SPECIES	25	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a.e	ENSGT00940000160720	ENSGT00390000009760	ENSGT00950000182967.a.a.a.a.b.b.b.l.a	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.k.a.a.b	ENSGT01050000244891.A.k.b	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.a.b.b	ENSGT00950000182818.D.k.a.b.a	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004.y	ENSGT00940000156559
Cebidae_a	ANCESTRAL SPECIES	17	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a.e	ENSGT00940000160720	ENSGT00390000009760	ENSGT00950000183070.a.b.g.b.b.a.b.b	ENSGT00950000182967.a.a.a.a.b.b.b.l.a	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.k.a.a.b	ENSGT01050000244891.A.k.b	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D.k.b	ENSGT00950000182818.D.k.a.b.a	ENSGT00950000182818.D.l.b	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004.y	ENSGT00940000156559
Capuchin	MODERN SPECIES	646											ENSCCAG00000026423	ENSCCAG00000019949	SMURF2 (ENSCCAG00000026224)	CEP95 (ENSCCAG00000028848)	DDX5 (ENSCCAG00000037932)	POLG2 (ENSCCAG00000025697) ##22	MILR1 (ENSCCAG00000020692)	PECAM1 (ENSCCAG00000020075)	TEX2 (ENSCCAG00000021956)	ERN1 (ENSCCAG00000034845)	ICAM2 (ENSCCAG00000029456)	PRR29 (ENSCCAG00000022228)	SCN4A (ENSCCAG00000030050)	ENSCCAG00000020048	ENSCCAG00000024776
Bolivian squirrel monkey	MODERN SPECIES	201										BPTF (ENSSBOG00000030398)	ENSSBOG00000019599	ENSSBOG00000035458	SMURF2 (ENSSBOG00000022418)	CEP95 (ENSSBOG00000020512)	DDX5 (ENSSBOG00000018926)	POLG2 (ENSSBOG00000028048) ##22	MILR1 (ENSSBOG00000028365)	PECAM1 (ENSSBOG00000025284)	TEX2 (ENSSBOG00000034693)	ERN1 (ENSSBOG00000035494)	ICAM2 (ENSSBOG00000031442)	PRR29 (ENSSBOG00000031248)	SCN4A (ENSSBOG00000031432)	ENSSBOG00000024957	ENSSBOG00000024966	ENSSBOG00000025072	ENSSBOG00000003503	ENSSBOG00000024210	ENSSBOG00000032400	ENSSBOG00000032920	SMARCD2 (ENSSBOG00000029365)
Marmoset	MODERN SPECIES	17	ENSCJAG00000008726	NOL11 (ENSCJAG00000008775)	ENSCJAG00000012603	BPTF (ENSCJAG00000031506)	C17orf58 (ENSCJAG00000041812)	ENSCJAG00000075828	ENSCJAG00000073466	ENSCJAG00000081146	ENSCJAG00000065370	ENSCJAG00000083853	ENSCJAG00000045924	ENSCJAG00000084707	SMURF2 (ENSCJAG00000019260)	CEP95 (ENSCJAG00000019293)	DDX5 (ENSCJAG00000019310)	POLG2 (ENSCJAG00000019350) ##22	ENSCJAG00000065145	MILR1 (ENSCJAG00000019250)	ENSCJAG00000040527	PECAM1 (ENSCJAG00000019367)	TEX2 (ENSCJAG00000019377)	ERN1 (ENSCJAG00000019415)	ICAM2 (ENSCJAG00000019438)	PRR29 (ENSCJAG00000019442)	SCN4A (ENSCJAG00000019443)	CD79B (ENSCJAG00000019471)	ENSCJAG00000043217	GH1 (ENSCJAG00000075159)	ENSCJAG00000060314	SMARCD2 (ENSCJAG00000019528)	PSMC5 (ENSCJAG00000019558)
Mas night monkey	MODERN SPECIES	507	CACNG4 (ENSANAG00000038342)	CACNG1 (ENSANAG00000037124)	HELZ (ENSANAG00000037949)	PSMD12 (ENSANAG00000024445)	ENSANAG00000021042	NOL11 (ENSANAG00000032675)	BPTF (ENSANAG00000022632)	ENSANAG00000032053	ENSANAG00000019254	ENSANAG00000035825	ENSANAG00000035098	SMURF2 (ENSANAG00000034547)	ENSANAG00000030515	CEP95 (ENSANAG00000031572)	DDX5 (ENSANAG00000007624)	POLG2 (ENSANAG00000034136) ##22	MILR1 (ENSANAG00000026436)	PECAM1 (ENSANAG00000036807)	TEX2 (ENSANAG00000035018)	ERN1 (ENSANAG00000019640)	PRR29 (ENSANAG00000033797)	ICAM2 (ENSANAG00000035089)	SCN4A (ENSANAG00000029572)	CD79B (ENSANAG00000024983)
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Tree shrew	MODERN SPECIES	8947																ENSTBEG00000000223 ##22
Glires	ANCESTRAL SPECIES	3	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089.a	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089.a	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004.x	ENSGT00940000156559	ENSGT00390000013997
Marmotini	ANCESTRAL SPECIES	8	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F.i	ENSGT00550000075004.x	ENSGT00940000156559	ENSGT00390000013997
Marmotini_b	ANCESTRAL SPECIES	38	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F.i	ENSGT00550000075004.x	ENSGT00940000156559	ENSGT00390000013997
Squirrel	MODERN SPECIES	141	APOH (ENSSTOG00000026343)	PRKCA (ENSSTOG00000003118)	CACNG5 (ENSSTOG00000006149)	CACNG4 (ENSSTOG00000009282)	CACNG1 (ENSSTOG00000007809)	HELZ (ENSSTOG00000007818)	PSMD12 (ENSSTOG00000003673)	PITPNC1 (ENSSTOG00000003688)	NOL11 (ENSSTOG00000003704)	BPTF (ENSSTOG00000013363)	ENSSTOG00000027925	KPNA2 (ENSSTOG00000026152)	SMURF2 (ENSSTOG00000026041)	ENSSTOG00000029590	DDX5 (ENSSTOG00000012526)	POLG2 (ENSSTOG00000012523) ##22	PECAM1 (ENSSTOG00000021605)	TEX2 (ENSSTOG00000028689)	ERN1 (ENSSTOG00000009067)	ICAM2 (ENSSTOG00000009058)	PRR29 (ENSSTOG00000030600)	SCN4A (ENSSTOG00000009013)	CD79B (ENSSTOG00000009000)	ENSSTOG00000008984	ENSSTOG00000026223	SMARCD2 (ENSSTOG00000008962)	ENSSTOG00000008945	FTSJ3 (ENSSTOG00000021265)	DDX42 (ENSSTOG00000008922)	ENSSTOG00000026806	ENSSTOG00000033061
Arctic ground squirrel	MODERN SPECIES	263						HELZ (ENSUPAG00010002790)	PSMD12 (ENSUPAG00010002759)	PITPNC1 (ENSUPAG00010002690)	NOL11 (ENSUPAG00010002348)	BPTF (ENSUPAG00010002285)	ENSUPAG00010002282	KPNA2 (ENSUPAG00010002207)	SMURF2 (ENSUPAG00010002142)	CEP95 (ENSUPAG00010001806)	DDX5 (ENSUPAG00010001773)	POLG2 (ENSUPAG00010001760) ##22	ENSUPAG00010001745	PECAM1 (ENSUPAG00010001634)	TEX2 (ENSUPAG00010001575)	ERN1 (ENSUPAG00010001480)	ICAM2 (ENSUPAG00010001458)	PRR29 (ENSUPAG00010001383)	SCN4A (ENSUPAG00010001330)	ENSUPAG00010001310	ENSUPAG00010001297	ENSUPAG00010001279	ENSUPAG00010001267	SMARCD2 (ENSUPAG00010001214)	PSMC5 (ENSUPAG00010001149)	FTSJ3 (ENSUPAG00010001097)	DDX42 (ENSUPAG00010001053)
Alpin marmot	MODERN SPECIES	97	APOH (ENSMMMG00000011711)	PRKCA (ENSMMMG00000011694)	CACNG5 (ENSMMMG00000011683)	ENSMMMG00000011678	CACNG1 (ENSMMMG00000011671)	HELZ (ENSMMMG00000011578)	PSMD12 (ENSMMMG00000011521)	PITPNC1 (ENSMMMG00000011507)	NOL11 (ENSMMMG00000011479)	BPTF (ENSMMMG00000011305)	ENSMMMG00000011293	KPNA2 (ENSMMMG00000011261)	SMURF2 (ENSMMMG00000011186)	CEP95 (ENSMMMG00000010820)	DDX5 (ENSMMMG00000010795)	POLG2 (ENSMMMG00000010776) ##22	ENSMMMG00000010771	PECAM1 (ENSMMMG00000010408)	TEX2 (ENSMMMG00000010383)	ERN1 (ENSMMMG00000010321)	ICAM2 (ENSMMMG00000010305)	SCN4A (ENSMMMG00000010268)	CD79B (ENSMMMG00000010255)	ENSMMMG00000010241	ENSMMMG00000010214	SMARCD2 (ENSMMMG00000010172)	ENSMMMG00000010130	FTSJ3 (ENSMMMG00000010083)	DDX42 (ENSMMMG00000010051)	ENSMMMG00000010027	CCDC47 (ENSMMMG00000010015)
Eurasian red squirrel	MODERN SPECIES	12	PRKCA (ENSSVLG00005012642)	CACNG5 (ENSSVLG00005012851)	CACNG4 (ENSSVLG00005012913)	CACNG1 (ENSSVLG00005012978)	HELZ (ENSSVLG00005013064)	ENSSVLG00005000100	PSMD12 (ENSSVLG00005000143)	PITPNC1 (ENSSVLG00005000197)	NOL11 (ENSSVLG00005000246)	BPTF (ENSSVLG00005000533)	C17orf58 (ENSSVLG00005000849)	ENSSVLG00005000878	SMURF2 (ENSSVLG00005000925)	CEP95 (ENSSVLG00005001017)	ENSSVLG00005001086	POLG2 (ENSSVLG00005001136) ##22	ENSSVLG00005001166	PECAM1 (ENSSVLG00005001184)	TEX2 (ENSSVLG00005001212)	ERN1 (ENSSVLG00005001278)	ICAM2 (ENSSVLG00005001332)	PRR29 (ENSSVLG00005001382)	ENSSVLG00005001418	ENSSVLG00005001427	ENSSVLG00005001521	ENSSVLG00005001585	SMARCD2 (ENSSVLG00005001615)	PSMC5 (ENSSVLG00005001684)	FTSJ3 (ENSSVLG00005001734)	DDX42 (ENSSVLG00005001779)	CCDC47 (ENSSVLG00005001836)
Hystricomorpha	ANCESTRAL SPECIES	24	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Naked mole-rat female	MODERN SPECIES	12	CACNG1 (ENSHGLG00000000787)	HELZ (ENSHGLG00000000732)	PSMD12 (ENSHGLG00000000655)	PITPNC1 (ENSHGLG00000003137)	NOL11 (ENSHGLG00000003039)	ENSHGLG00000039565	ENSHGLG00000046199	ENSHGLG00000034857	ENSHGLG00000047592	ENSHGLG00000002130	ENSHGLG00000002095	ENSHGLG00000001992	ENSHGLG00000001847	ENSHGLG00000044021	DDX5 (ENSHGLG00000001771)	POLG2 (ENSHGLG00000037428) ##22	ENSHGLG00000001698	ENSHGLG00000001663	ENSHGLG00000007638	DDX52 (ENSHGLG00000006235)	SYNRG (ENSHGLG00000004431)	ENSHGLG00000047903	DUSP14 (ENSHGLG00000033195)	TADA2A (ENSHGLG00000003972)	ACACA (ENSHGLG00000011781)	ENSHGLG00000038049	AATF (ENSHGLG00000009510)	LHX1 (ENSHGLG00000042105)	MRM1 (ENSHGLG00000008701)	DHRS11 (ENSHGLG00000035143)	GGNBP2 (ENSHGLG00000013148)
Hystricomorpha_a	ANCESTRAL SPECIES	19	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Guinea pig	MODERN SPECIES	65	ENSCPOG00000003931	APOH (ENSCPOG00000012289)	ENSCPOG00000033196	PRKCA (ENSCPOG00000014901)	CACNG4 (ENSCPOG00000019278)	CACNG1 (ENSCPOG00000030085)	HELZ (ENSCPOG00000014911)	PSMD12 (ENSCPOG00000004023)	PITPNC1 (ENSCPOG00000011412)	NOL11 (ENSCPOG00000011415)	BPTF (ENSCPOG00000004261)	ENSCPOG00000026318	SMURF2 (ENSCPOG00000007168)	CEP95 (ENSCPOG00000007148)	DDX5 (ENSCPOG00000007133)	POLG2 (ENSCPOG00000007124) ##22	ENSCPOG00000024719	PECAM1 (ENSCPOG00000012306)	TEX2 (ENSCPOG00000003606)	ERN1 (ENSCPOG00000000570)	ICAM2 (ENSCPOG00000039385)	PRR29 (ENSCPOG00000026269)	SCN4A (ENSCPOG00000008540)	CD79B (ENSCPOG00000008538)	GHB1 (ENSCPOG00000022220)	SMARCD2 (ENSCPOG00000011371)	PSMC5 (ENSCPOG00000011376)	FTSJ3 (ENSCPOG00000011384)	DDX42 (ENSCPOG00000005633)	CCDC47 (ENSCPOG00000005626)	STRADA (ENSCPOG00000005614)
Hystricomorpha_b	ANCESTRAL SPECIES	12	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT00940000166788	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Degu	MODERN SPECIES	74	ENSODEG00000008467	ENSODEG00000013947	CACNG5 (ENSODEG00000010559)	CACNG4 (ENSODEG00000008813)	CACNG1 (ENSODEG00000008695)	ENSODEG00000013761	ENSODEG00000008601	ENSODEG00000007838	ENSODEG00000011392	PITPNC1 (ENSODEG00000007766)	NOL11 (ENSODEG00000007922)	BPTF (ENSODEG00000008688)	ENSODEG00000007961	SMURF2 (ENSODEG00000007808)	ENSODEG00000007493	POLG2 (ENSODEG00000008546) ##22	ENSODEG00000007679	PECAM1 (ENSODEG00000007634)	ENSODEG00000007539	ENSODEG00000008465	ERN1 (ENSODEG00000007755)	ICAM2 (ENSODEG00000007206)	PRR29 (ENSODEG00000009229)	SCN4A (ENSODEG00000009534)	CD79B (ENSODEG00000012888)	ENSODEG00000009570	ENSODEG00000009207	SMARCD2 (ENSODEG00000008293)	ENSODEG00000008510	FTSJ3 (ENSODEG00000008167)	DDX42 (ENSODEG00000007810)
Long-tailed chinchilla	MODERN SPECIES	185	APOH (ENSCLAG00000003838)	PRKCA (ENSCLAG00000004100)	CACNG5 (ENSCLAG00000004248)	CACNG4 (ENSCLAG00000004519)	CACNG1 (ENSCLAG00000004375)	HELZ (ENSCLAG00000004638)	PSMD12 (ENSCLAG00000005477)	PITPNC1 (ENSCLAG00000005836)	NOL11 (ENSCLAG00000002744)	BPTF (ENSCLAG00000003504)	ENSCLAG00000004611	KPNA2 (ENSCLAG00000004650)	SMURF2 (ENSCLAG00000004880)	CEP95 (ENSCLAG00000005716)	DDX5 (ENSCLAG00000006874)	POLG2 (ENSCLAG00000007162) ##22	ENSCLAG00000008069	PECAM1 (ENSCLAG00000008503)	TEX2 (ENSCLAG00000006475)	ERN1 (ENSCLAG00000006912)	PRR29 (ENSCLAG00000007391)	ICAM2 (ENSCLAG00000007585)	SCN4A (ENSCLAG00000007693)	CD79B (ENSCLAG00000008401)	ENSCLAG00000008456	ENSCLAG00000010989	SMARCD2 (ENSCLAG00000011368)	PSMC5 (ENSCLAG00000013231)	FTSJ3 (ENSCLAG00000003222)	DDX42 (ENSCLAG00000003497)	CCDC47 (ENSCLAG00000004263)
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089.a	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Kangaroo rat	MODERN SPECIES	326	Apoh (ENSDORG00000003443)	Prkca (ENSDORG00000010223)	Cacng5 (ENSDORG00000005605)	Cacng4 (ENSDORG00000010956)	ENSDORG00000027884	ENSDORG00000014256	ENSDORG00000027745	Psmd12 (ENSDORG00000008026)	Pitpnc1 (ENSDORG00000003695)	Bptf (ENSDORG00000010333)	ENSDORG00000027371	ENSDORG00000012160	Smurf2 (ENSDORG00000024550)	ENSDORG00000023977	Ddx5 (ENSDORG00000004866)	Polg2 (ENSDORG00000001592) ##22	ENSDORG00000001590	Pecam1 (ENSDORG00000025909)	ENSDORG00000008565	ENSDORG00000028353	ENSDORG00000001504	ENSDORG00000003800	ENSDORG00000025822	ENSDORG00000029941	ENSDORG00000005308	Rab37 (ENSDORG00000005310)	Nherf1 (ENSDORG00000005312)	Nat9 (ENSDORG00000005315)	Tmem104 (ENSDORG00000005316)	Grin2c (ENSDORG00000005317)	ENSDORG00000005320
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089.a	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Lesser Egyptian jerboa	MODERN SPECIES	56	Prkca (ENSJJAG00000019799)	Cacng5 (ENSJJAG00000008035)	Cacng4 (ENSJJAG00000020353)	Cacng1 (ENSJJAG00000019029)	ENSJJAG00000018347	Helz (ENSJJAG00000019941)	Psmd12 (ENSJJAG00000017621)	Pitpnc1 (ENSJJAG00000021296)	Nol11 (ENSJJAG00000019386)	Bptf (ENSJJAG00000022061)	ENSJJAG00000023193	ENSJJAG00000017838	Smurf2 (ENSJJAG00000014730)	Cep95 (ENSJJAG00000019343)	Ddx5 (ENSJJAG00000017587)	Polg2 (ENSJJAG00000018108) ##22	ENSJJAG00000017770	Pecam1 (ENSJJAG00000015951)	ENSJJAG00000004964	Lyzl6 (ENSJJAG00000011825)	Rprml (ENSJJAG00000005531)	Gosr2 (ENSJJAG00000015324)	Wnt9b (ENSJJAG00000021195)	Wnt3 (ENSJJAG00000019195)	Nsf (ENSJJAG00000016563)	Arf2 (ENSJJAG00000015730)	Crhr1 (ENSJJAG00000015347)	Sppl2c (ENSJJAG00000009854)	ENSJJAG00000018581	Kansl1 (ENSJJAG00000019096)	ENSJJAG00000022748
Muroidea	ANCESTRAL SPECIES		ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT01000000216685	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089.a	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004
Upper Galilee mountains blind mole rat	MODERN SPECIES	1159								ENSNGAG00000016414	ENSNGAG00000021007	ENSNGAG00000019236	ENSNGAG00000019002	ENSNGAG00000013610	Smurf2 (ENSNGAG00000013579)	ENSNGAG00000018007	Ddx5 (ENSNGAG00000016241)	Polg2 (ENSNGAG00000016032) ##22
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT01000000216685	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089.a	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004
Cricetidae	ANCESTRAL SPECIES		ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830.m.b	ENSGT00940000154830.m.a	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT01000000216685	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559.c
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830.m.b	ENSGT00940000154830.m.a	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT01000000216685	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559.c
Chinese hamster chok1gshd	MODERN SPECIES	33	Apoh (ENSCGRG00001016274)	Prkca (ENSCGRG00001000934)	Cacng5 (ENSCGRG00001019493)	Cacng4 (ENSCGRG00001025046)	Cacng1 (ENSCGRG00001021421)	Helz (ENSCGRG00001015066)	Psmd12 (ENSCGRG00001008831)	Pitpnc1 (ENSCGRG00001013583)	Nol11 (ENSCGRG00001024010)	Bptf (ENSCGRG00001017221)	1810010H24Rik (ENSCGRG00001005832)	ENSCGRG00001001675	Smurf2 (ENSCGRG00001023581)	Cep95 (ENSCGRG00001018047)	Ddx5 (ENSCGRG00001014644)	Polg2 (ENSCGRG00001013686) ##22	Milr1 (ENSCGRG00001021939)	Pecam1 (ENSCGRG00001020004)	Tex2 (ENSCGRG00001011350)	Ern1 (ENSCGRG00001003211)	Icam2 (ENSCGRG00001025007)	Prr29 (ENSCGRG00001024910)	Scn4a (ENSCGRG00001013865)	Cd79b (ENSCGRG00001022158)	Gh (ENSCGRG00001020762)	Tcam1 (ENSCGRG00001017311)	Smarcd2 (ENSCGRG00001021228)	Psmc5 (ENSCGRG00001001237)	FTSJ3 (ENSCGRG00001018068)	Ddx42 (ENSCGRG00001009775)	Ccdc47 (ENSCGRG00001022567)
Golden Hamster	MODERN SPECIES	637	Prkca (ENSMAUG00000008808)	Cacng5 (ENSMAUG00000006074)	Cacng4 (ENSMAUG00000009737)	Cacng1 (ENSMAUG00000001874)	Helz (ENSMAUG00000013803)	Pitpnc1 (ENSMAUG00000014044)	Nol11 (ENSMAUG00000009375)	ENSMAUG00000012134	ENSMAUG00000014781	ENSMAUG00000013301	ENSMAUG00000020721	ENSMAUG00000008315	ENSMAUG00000010800	Cep95 (ENSMAUG00000011495)	Ddx5 (ENSMAUG00000008696)	Polg2 (ENSMAUG00000008860) ##22	ENSMAUG00000014158	Pecam1 (ENSMAUG00000011626)	ENSMAUG00000013338	ENSMAUG00000019923	ENSMAUG00000021846	Icam2 (ENSMAUG00000016077)	Prr29 (ENSMAUG00000017782)	Scn4a (ENSMAUG00000013596)	Cd79b (ENSMAUG00000017041)	Gh1 (ENSMAUG00000003250)	Tcam1 (ENSMAUG00000018249)	Smarcd2 (ENSMAUG00000020853)	Psmc5 (ENSMAUG00000012661)	Ftsj3 (ENSMAUG00000015688)	ENSMAUG00000020774
Cricetidae_B	ANCESTRAL SPECIES		ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830.m.b	ENSGT00940000154830.n	ENSGT00940000154830.m.a	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559.c	ENSGT00390000013997
Northern American deer mouse	MODERN SPECIES	21	Prkca (ENSPEMG00000000053)	Cacng5 (ENSPEMG00000027675)	Cacng4 (ENSPEMG00000024770)	Cacng1 (ENSPEMG00000013430)	ENSPEMG00000029016	Helz (ENSPEMG00000016768)	Psmd12 (ENSPEMG00000010474)	Pitpnc1 (ENSPEMG00000010136)	ENSPEMG00000014781	Bptf (ENSPEMG00000012838)	1810010H24Rik (ENSPEMG00000024552)	ENSPEMG00000018167	Smurf2 (ENSPEMG00000012192)	Cep95 (ENSPEMG00000015557)	Ddx5 (ENSPEMG00000016502)	Polg2 (ENSPEMG00000016654) ##22	ENSPEMG00000003917	Pecam1 (ENSPEMG00000006712)	ENSPEMG00000018988	Ern1 (ENSPEMG00000002339)	Icam2 (ENSPEMG00000004658)	Prr29 (ENSPEMG00000011763)	Scn4a (ENSPEMG00000013778)	Cd79b (ENSPEMG00000001873)	Gh (ENSPEMG00000006304)	Tcam1 (ENSPEMG00000007448)	Smarcd2 (ENSPEMG00000008268)	ENSPEMG00000018373	Ftsj3 (ENSPEMG00000000248)	Ddx42 (ENSPEMG00000006755)	ENSPEMG00000010379
Prairie vole	MODERN SPECIES	15	Cacng1 (ENSMOCG00000022700)	ENSMOCG00000021795	ENSMOCG00000019819	ENSMOCG00000017691	Psmd12 (ENSMOCG00000020324)	Pitpnc1 (ENSMOCG00000016604)	Nol11 (ENSMOCG00000012117)	ENSMOCG00000014143	ENSMOCG00000012024	ENSMOCG00000007201	ENSMOCG00000001219	ENSMOCG00000010455	Smurf2 (ENSMOCG00000007881)	Cep95 (ENSMOCG00000001907)	Ddx5 (ENSMOCG00000012124)	Polg2 (ENSMOCG00000022506) ##22	Milr1 (ENSMOCG00000011035)	Pecam1 (ENSMOCG00000007681)	ENSMOCG00000020002	Ern1 (ENSMOCG00000003999)	Icam2 (ENSMOCG00000022483)	Prr29 (ENSMOCG00000014006)	Scn4a (ENSMOCG00000019442)	Cd79b (ENSMOCG00000015364)	Gh (ENSMOCG00000013034)	ENSMOCG00000003041	Tenm2 (ENSMOCG00000009710)	Wwc1 (ENSMOCG00000019399)	Rars (ENSMOCG00000005240)	Fbll1 (ENSMOCG00000022683)	Pank3 (ENSMOCG00000006926)
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089.a	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Mus	ANCESTRAL SPECIES	2	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.cb.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089.a	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.cb.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089.a	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.cb.a.a.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089.a	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Mus_C	ANCESTRAL SPECIES	21	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT01050000244891.A.cb.a.b	ENSGT00960000187096	ENSGT01050000244891.A.cb.a.a.b	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT01030000235089.a	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559
Steppe mouse	MODERN SPECIES	3424	Prkca (ENSMSIG00000022965)	Cacng5 (ENSMSIG00000023007)	ENSMSIG00000023044	Cacng1 (ENSMSIG00000023049)	Helz (ENSMSIG00000023057)	Psmd12 (ENSMSIG00000023153)	Pitpnc1 (ENSMSIG00000023275)	ENSMSIG00000023314	Nol11 (ENSMSIG00000023320)	Bptf (ENSMSIG00000023393)	ENSMSIG00000023800	ENSMSIG00000023823	Smurf2 (ENSMSIG00000023844)	Cep95 (ENSMSIG00000023997)	ENSMSIG00000024093	Polg2 (ENSMSIG00000024120) ##22	Milr1 (ENSMSIG00000024140)	Pecam1 (ENSMSIG00000024334)	Tex2 (ENSMSIG00000024736)	Ern1 (ENSMSIG00000024769)	Icam2 (ENSMSIG00000024805)	Prr29 (ENSMSIG00000024812)	Scn4a (ENSMSIG00000024972)	ENSMSIG00000025006	Cd79b (ENSMSIG00000025010)	Gh (ENSMSIG00000025028)	Tcam1 (ENSMSIG00000025039)	Smarcd2 (ENSMSIG00000025057)	Psmc5 (ENSMSIG00000025105)	Ftsj3 (ENSMSIG00000025133)	Ddx42 (ENSMSIG00000025151)
spretus	MODERN SPECIES	2	Cep112 (MGP_SPRETEiJ_G0018187)	Apoh (MGP_SPRETEiJ_G0018186)	Prkca (MGP_SPRETEiJ_G0018185)	Cacng5 (MGP_SPRETEiJ_G0018184)	Cacng4 (MGP_SPRETEiJ_G0018183)	Cacng1 (MGP_SPRETEiJ_G0018182)	Helz (MGP_SPRETEiJ_G0018181)	Psmd12 (MGP_SPRETEiJ_G0018180)	Pitpnc1 (MGP_SPRETEiJ_G0018179)	Nol11 (MGP_SPRETEiJ_G0018178)	Bptf (MGP_SPRETEiJ_G0018177)	MGP_SPRETEiJ_G0018176	Smurf2 (MGP_SPRETEiJ_G0018175)	Cep95 (MGP_SPRETEiJ_G0018174)	Ddx5 (MGP_SPRETEiJ_G0018173)	Polg2 (MGP_SPRETEiJ_G0018172) ##22	Milr1 (MGP_SPRETEiJ_G0018171)	Pecam1 (MGP_SPRETEiJ_G0018170)	Tex2 (MGP_SPRETEiJ_G0018169)	Ern1 (MGP_SPRETEiJ_G0018168)	Icam2 (MGP_SPRETEiJ_G0018167)	MGP_SPRETEiJ_G0018166	Cd79b (MGP_SPRETEiJ_G0018164)	Gh (MGP_SPRETEiJ_G0018163)	Tcam1 (MGP_SPRETEiJ_G0018162)	Smarcd2 (MGP_SPRETEiJ_G0018161)	Psmc5 (MGP_SPRETEiJ_G0018160)	Ftsj3 (MGP_SPRETEiJ_G0018159)	Ddx42 (MGP_SPRETEiJ_G0018158)	Ccdc47 (MGP_SPRETEiJ_G0018157)	Strada (MGP_SPRETEiJ_G0018156)
Mouse	MODERN SPECIES	2	Apoh (ENSMUSG00000000049)	Prkca (ENSMUSG00000050965)	Cacng5 (ENSMUSG00000040373)	Cacng4 (ENSMUSG00000020723)	Cacng1 (ENSMUSG00000020722)	Helz (ENSMUSG00000020721)	Psmd12 (ENSMUSG00000020720)	Pitpnc1 (ENSMUSG00000040430)	Nol11 (ENSMUSG00000018433)	Bptf (ENSMUSG00000040481)	1810010H24Rik (ENSMUSG00000078607)	Kpna2 (ENSMUSG00000018362)	Smurf2 (ENSMUSG00000018363)	Cep95 (ENSMUSG00000018372)	Ddx5 (ENSMUSG00000020719)	Polg2 (ENSMUSG00000020718) ##22	Milr1 (ENSMUSG00000040528)	Pecam1 (ENSMUSG00000020717)	Tex2 (ENSMUSG00000040548)	Ern1 (ENSMUSG00000020715)	Icam2 (ENSMUSG00000001029)	Prr29 (ENSMUSG00000009210)	Scn4a (ENSMUSG00000001027)	Cd79b (ENSMUSG00000040592)	Gh (ENSMUSG00000020713)	Tcam1 (ENSMUSG00000020712)	Smarcd2 (ENSMUSG00000078619)	Psmc5 (ENSMUSG00000020708)	Ftsj3 (ENSMUSG00000020706)	Ddx42 (ENSMUSG00000020705)	Ccdc47 (ENSMUSG00000078622)
Ryukyu mouse	MODERN SPECIES	2	Cep112 (MGP_CAROLIEiJ_G0017343)	Apoh (MGP_CAROLIEiJ_G0017342)	Prkca (MGP_CAROLIEiJ_G0017341)	Cacng5 (MGP_CAROLIEiJ_G0017340)	Cacng4 (MGP_CAROLIEiJ_G0017339)	Cacng1 (MGP_CAROLIEiJ_G0017338)	Helz (MGP_CAROLIEiJ_G0017337)	Psmd12 (MGP_CAROLIEiJ_G0017336)	Pitpnc1 (MGP_CAROLIEiJ_G0017335)	Nol11 (MGP_CAROLIEiJ_G0017334)	Bptf (MGP_CAROLIEiJ_G0017333)	MGP_CAROLIEiJ_G0017332	Smurf2 (MGP_CAROLIEiJ_G0017331)	Cep95 (MGP_CAROLIEiJ_G0017330)	MGP_CAROLIEiJ_G0017329	Polg2 (MGP_CAROLIEiJ_G0017328) ##22	Milr1 (MGP_CAROLIEiJ_G0017327)	Pecam1 (MGP_CAROLIEiJ_G0017326)	Tex2 (MGP_CAROLIEiJ_G0017325)	Ern1 (MGP_CAROLIEiJ_G0017324)	Icam2 (MGP_CAROLIEiJ_G0017323)	MGP_CAROLIEiJ_G0017322	Scn4a (MGP_CAROLIEiJ_G0017321)	Cd79b (MGP_CAROLIEiJ_G0017320)	Gh (MGP_CAROLIEiJ_G0017319)	Tcam1 (MGP_CAROLIEiJ_G0017318)	Smarcd2 (MGP_CAROLIEiJ_G0017317)	Psmc5 (MGP_CAROLIEiJ_G0017316)	Ftsj3 (MGP_CAROLIEiJ_G0017315)	Ddx42 (MGP_CAROLIEiJ_G0017314)	Ccdc47 (MGP_CAROLIEiJ_G0017313)
Shrew mouse	MODERN SPECIES	5	Cep112 (MGP_PahariEiJ_G0018473)	MGP_PahariEiJ_G0018472	Prkca (MGP_PahariEiJ_G0018471)	Cacng5 (MGP_PahariEiJ_G0018470)	Cacng4 (MGP_PahariEiJ_G0018469)	Cacng1 (MGP_PahariEiJ_G0018468)	Helz (MGP_PahariEiJ_G0018467)	Psmd12 (MGP_PahariEiJ_G0018466)	Pitpnc1 (MGP_PahariEiJ_G0018465)	MGP_PahariEiJ_G0018464	Bptf (MGP_PahariEiJ_G0018463)	MGP_PahariEiJ_G0018462	Smurf2 (MGP_PahariEiJ_G0018461)	Cep95 (MGP_PahariEiJ_G0018460)	MGP_PahariEiJ_G0018459	Polg2 (MGP_PahariEiJ_G0018458) ##22	Milr1 (MGP_PahariEiJ_G0018457)	Pecam1 (MGP_PahariEiJ_G0018456)	Tex2 (MGP_PahariEiJ_G0018455)	Ern1 (MGP_PahariEiJ_G0018454)	Icam2 (MGP_PahariEiJ_G0018453)	MGP_PahariEiJ_G0018452	Scn4a (MGP_PahariEiJ_G0018451)	MGP_PahariEiJ_G0018450	Gh (MGP_PahariEiJ_G0018449)	MGP_PahariEiJ_G0018448	Smarcd2 (MGP_PahariEiJ_G0018447)	Psmc5 (MGP_PahariEiJ_G0018446)	Ftsj3 (MGP_PahariEiJ_G0018445)	MGP_PahariEiJ_G0018444	Ccdc47 (MGP_PahariEiJ_G0018443)
Rat	MODERN SPECIES	1	Cacng5 (ENSRNOG00000003288)	Cacng4 (ENSRNOG00000003262)	Cacng1 (ENSRNOG00000003245)	Helz (ENSRNOG00000003213)	Psmd12 (ENSRNOG00000003117)	ENSRNOG00000065925	RGD1359290 (ENSRNOG00000027271)	Pitpnc1 (ENSRNOG00000069160)	Nol11 (ENSRNOG00000052934)	Bptf (ENSRNOG00000047296)	C10h17orf58 (ENSRNOG00000043295)	Kpna2 (ENSRNOG00000015329)	Smurf2 (ENSRNOG00000014623)	Cep95 (ENSRNOG00000014354)	Ddx5 (ENSRNOG00000030680)	Polg2 (ENSRNOG00000013728) ##22	Milr1 (ENSRNOG00000042524)	Pecam1 (ENSRNOG00000066008)	Tex2 (ENSRNOG00000013659)	Ern1 (ENSRNOG00000012864)	Icam2 (ENSRNOG00000025143)	Prr29 (ENSRNOG00000060193)	Scn4a (ENSRNOG00000012134)	Cd79b (ENSRNOG00000011917)	Gh1 (ENSRNOG00000011207)	Tcam1 (ENSRNOG00000010929)	Smarcd2 (ENSRNOG00000010557)	Psmc5 (ENSRNOG00000010038)	Ftsj3 (ENSRNOG00000009857)	Ddx42 (ENSRNOG00000009474)	Ccdc47 (ENSRNOG00000009006)
Lagomorpha	ANCESTRAL SPECIES	44	ENSGT00390000006544	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT00940000166788	ENSGT01070000253837	ENSGT00390000000463.h	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000	ENSGT00940000159417	ENSGT00940000154363.B	ENSGT00950000182818.D	ENSGT00940000163726	ENSGT00940000158654	ENSGT01020000230346.F	ENSGT00550000075004	ENSGT00940000156559	ENSGT00390000013997
Pika	MODERN SPECIES	3727												KPNA2 (ENSOPRG00000018861)	SMURF2 (ENSOPRG00000008250)	CEP95 (ENSOPRG00000008223)	DDX5 (ENSOPRG00000008204)	POLG2 (ENSOPRG00000008195) ##22	ENSOPRG00000008177	ENSOPRG00000008171	TEX2 (ENSOPRG00000008151)	ERN1 (ENSOPRG00000008129)
Rabbit	MODERN SPECIES	10	CEP112 (ENSOCUG00000008454)	PRKCA (ENSOCUG00000007362)	CACNG5 (ENSOCUG00000031061)	CACNG4 (ENSOCUG00000014218)	ENSOCUG00000008850	HELZ (ENSOCUG00000008856)	PSMD12 (ENSOCUG00000013922)	PITPNC1 (ENSOCUG00000015605)	NOL11 (ENSOCUG00000015612)	BPTF (ENSOCUG00000015866)	ENSOCUG00000015913	ENSOCUG00000023204	SMURF2 (ENSOCUG00000012776)	CEP95 (ENSOCUG00000012756)	DDX5 (ENSOCUG00000026305)	POLG2 (ENSOCUG00000032207) ##22	ENSOCUG00000007896	PECAM1 (ENSOCUG00000015220)	ENSOCUG00000034748	TEX2 (ENSOCUG00000012090)	ENSOCUG00000004362	ENSOCUG00000029995	ICAM2 (ENSOCUG00000012856)	PRR29 (ENSOCUG00000035912)	SCN4A (ENSOCUG00000004347)	CD79B (ENSOCUG00000004345)	GHB1 (ENSOCUG00000004341)	ENSOCUG00000026494	SMARCD2 (ENSOCUG00000004337)	ENSOCUG00000004329	FTSJ3 (ENSOCUG00000004319)
Atlantogenata	ANCESTRAL SPECIES	21	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000
Xenarthra	ANCESTRAL SPECIES	418												ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00940000161654	ENSGT00390000002000
Armadillo	MODERN SPECIES	1121										ENSDNOG00000038577	ENSDNOG00000019151	SMURF2 (ENSDNOG00000032050)	ENSDNOG00000041286	CEP95 (ENSDNOG00000042222)	ENSDNOG00000004247	POLG2 (ENSDNOG00000006906) ##22	MILR1 (ENSDNOG00000005695)	PECAM1 (ENSDNOG00000012963)	TEX2 (ENSDNOG00000015515)	ENSDNOG00000045259	ERN1 (ENSDNOG00000009467)	ICAM2 (ENSDNOG00000002412)	ENSDNOG00000036008
Sloth	MODERN SPECIES	2925																ENSCHOG00000012147 ##22
Afrotheria	ANCESTRAL SPECIES	18	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00940000161654
Tenrec	MODERN SPECIES	3242																ENSETEG00000002345 ##22
Afrotheria_a	ANCESTRAL SPECIES	25	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.b	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01050000244808.A.b.b.b	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00940000161654
Hyrax	MODERN SPECIES	2647																ENSPCAG00000005549 ##22
Elephant	MODERN SPECIES	424	APOH (ENSLAFG00000026955)	PRKCA (ENSLAFG00000005785)	CACNG5 (ENSLAFG00000028822)	CACNG4 (ENSLAFG00000018580)	CACNG1 (ENSLAFG00000018581)	HELZ (ENSLAFG00000003860)	PSMD12 (ENSLAFG00000010876)	PITPNC1 (ENSLAFG00000006084)	NOL11 (ENSLAFG00000002021)	BPTF (ENSLAFG00000017552)	ENSLAFG00000020879	KPNA2 (ENSLAFG00000022875)	SMURF2 (ENSLAFG00000004466)	CEP95 (ENSLAFG00000022114)	DDX5 (ENSLAFG00000004461)	POLG2 (ENSLAFG00000011216) ##22	ENSLAFG00000009673	PECAM1 (ENSLAFG00000012603)	TEX2 (ENSLAFG00000008507)	ERN1 (ENSLAFG00000008504)	ICAM2 (ENSLAFG00000005001)	ENSLAFG00000030259
Marsupialia	ANCESTRAL SPECIES	13	ENSGT00390000006544	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.jb	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000013965	ENSGT00940000153536.a.b	ENSGT00940000158181	ENSGT00940000153251.b.b	ENSGT00940000157276.d	ENSGT00550000075089	ENSGT00510000046608.A	ENSGT00940000160801	ENSGT00940000154873.g.b	ENSGT00940000154873.h	ENSGT00940000153500.a.b	ENSGT00940000154003.B	ENSGT00390000002725	ENSGT00940000156853
Marsupialia_b	ANCESTRAL SPECIES	16	ENSGT00390000006544	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.jb	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000013965	ENSGT00940000153536.a.b	ENSGT00940000158181	ENSGT00940000153251.b.b	ENSGT00940000157276.d	ENSGT00550000075089	ENSGT00510000046608.A	ENSGT00940000160801	ENSGT00940000154873.g.b	ENSGT00940000154873.h	ENSGT00940000153500.a.b	ENSGT00940000154003.B	ENSGT00390000002725	ENSGT00940000156853
Diprotodontia	ANCESTRAL SPECIES	9	ENSGT00390000006544	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.jb	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000013965	ENSGT00940000153536.a.b	ENSGT00940000158181	ENSGT00940000153251.b.b	ENSGT00940000157276.d	ENSGT00550000075089	ENSGT00510000046608.A	ENSGT00940000160801	ENSGT00940000154873.g.b	ENSGT00940000154873.h	ENSGT00940000153500.a.b	ENSGT00940000154003.B	ENSGT00390000002725	ENSGT00940000156853
Diprotodontia_a	ANCESTRAL SPECIES	11	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00950000182886.a.a.b.r	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.A.jb	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000013965	ENSGT00940000153536.a.b	ENSGT00940000158181	ENSGT00940000153251.b.b	ENSGT00940000157276.d	ENSGT00550000075089	ENSGT00510000046608.A	ENSGT00940000160801	ENSGT00940000154873.g.b	ENSGT00940000154873.h	ENSGT00940000153500.a.b	ENSGT00940000154003.B	ENSGT00390000002725	ENSGT00940000156853
koala	MODERN SPECIES	87	HELZ (ENSPCIG00000030106)	ENSPCIG00000019275	PSMD12 (ENSPCIG00000019279)	ENSPCIG00000019289	PITPNC1 (ENSPCIG00000019281)	NOL11 (ENSPCIG00000019293)	BPTF (ENSPCIG00000009740)	ENSPCIG00000009665	ENSPCIG00000031275	ENSPCIG00000028186	ENSPCIG00000016932	KPNA2 (ENSPCIG00000016934)	SMURF2 (ENSPCIG00000019300)	CEP95 (ENSPCIG00000019319)	DDX5 (ENSPCIG00000014428)	POLG2 (ENSPCIG00000014426) ##22	PECAM1 (ENSPCIG00000014423)	ENSPCIG00000028075	CSNK1D (ENSPCIG00000028077)	SLC16A3 (ENSPCIG00000028081)	CCDC57 (ENSPCIG00000006428)	FASN (ENSPCIG00000023890)	DUS1L (ENSPCIG00000023887)	GPS1 (ENSPCIG00000023883)	ENSPCIG00000023880	ENSPCIG00000023879	ENSPCIG00000009162	RAC3 (ENSPCIG00000032841)	LRRC45 (ENSPCIG00000009160)	ENSPCIG00000009158	ASPSCR1 (ENSPCIG00000009156)
Common wonbat	MODERN SPECIES	1037	PRKCA (ENSVURG00010012893)	CACNG4 (ENSVURG00010014798)	CACNG1 (ENSVURG00010014809)	HELZ (ENSVURG00010014820)	ENSVURG00010014839	PSMD12 (ENSVURG00010014852)	PITPNC1 (ENSVURG00010014881)	NOL11 (ENSVURG00010014960)	BPTF (ENSVURG00010015020)	ENSVURG00010015433	ENSVURG00010015438	KPNA2 (ENSVURG00010015443)	SMURF2 (ENSVURG00010015459)	CEP95 (ENSVURG00010015481)	DDX5 (ENSVURG00010015520)	POLG2 (ENSVURG00010015539) ##22	PECAM1 (ENSVURG00010015547)	ENSVURG00010015572	CSNK1D (ENSVURG00010015585)	SLC16A3 (ENSVURG00010015602)	ENSVURG00010015617	FASN (ENSVURG00010015648)	DUS1L (ENSVURG00010015682)	GPS1 (ENSVURG00010015702)	ENSVURG00010015736
Wallaby	MODERN SPECIES	4280															DDX5 (ENSMEUG00000003843)	ENSMEUG00000003840 ##22
Opossum	MODERN SPECIES	1	CACNG1 (ENSMODG00000004045)	HELZ (ENSMODG00000004034)	PSMD12 (ENSMODG00000003986)	PITPNC1 (ENSMODG00000003961)	ENSMODG00000041640	NOL11 (ENSMODG00000003956)	ENSMODG00000037884	BPTF (ENSMODG00000003866)	ENSMODG00000046267	ENSMODG00000038752	ENSMODG00000003897	SMURF2 (ENSMODG00000003804)	ENSMODG00000003809	ENSMODG00000003779	ENSMODG00000003743	POLG2 (ENSMODG00000003701) ##22	ENSMODG00000025673	ENSMODG00000025674	CSNK1D (ENSMODG00000003587)	SLC16A3 (ENSMODG00000003551)	CCDC57 (ENSMODG00000003443)	ENSMODG00000003452	ENSMODG00000041427	FASN (ENSMODG00000003423)	GPS1 (ENSMODG00000003331)	DUS1L (ENSMODG00000003351)	RFNG (ENSMODG00000003286)	ENSMODG00000041888	ENSMODG00000003255	RAC3 (ENSMODG00000003244)	LRRC45 (ENSMODG00000003220)
Platypus	MODERN SPECIES	6	APOH (ENSOANG00000008061)	PRKCA (ENSOANG00000008060)	CACNG4 (ENSOANG00000008059)	CACNG1 (ENSOANG00000008057)	HELZ (ENSOANG00000008056)	PSMD12 (ENSOANG00000008054)	PITPNC1 (ENSOANG00000043329)	NOL11 (ENSOANG00000008052)	ENSOANG00000037969	ENSOANG00000008050	ENSOANG00000045659	KPNA2 (ENSOANG00000008048)	SMURF2 (ENSOANG00000008046)	ENSOANG00000008045	DDX5 (ENSOANG00000008043)	POLG2 (ENSOANG00000008042) ##22	ENSOANG00000008041	ENSOANG00000008040	TEX2 (ENSOANG00000008037)	ZNF207 (ENSOANG00000011104)	C17orf75 (ENSOANG00000039101)	RHBDL3 (ENSOANG00000050010)	RHOT1 (ENSOANG00000008032)	ENSOANG00000008031	ADAP2 (ENSOANG00000005260)	TEFM (ENSOANG00000007541)	ATAD5 (ENSOANG00000005254)	CRLF3 (ENSOANG00000005253)	SUZ12 (ENSOANG00000005252)	UTP6 (ENSOANG00000004279)	ENSOANG00000002757
Anura	ANCESTRAL SPECIES	48	ENSGT00940000157228	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.F	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00390000000463	ENSGT00940000159761	ENSGT00390000013973.B.a	ENSGT00390000013973.B.b	ENSGT00730000111057	ENSGT00390000005481	ENSGT00940000158838	ENSGT00940000155641	ENSGT00940000164538	ENSGT00940000156498	ENSGT00390000010581	ENSGT00940000153469.a.a	ENSGT00940000153469.a.b	ENSGT00390000012364
Frog	MODERN SPECIES	1	CACNG5 (ENSXETG00000047074)	cacng4 (ENSXETG00000049297)	cacng1 (ENSXETG00000037972)	ENSXETG00000043001	eaf2 (ENSXETG00000015395)	psmd12 (ENSXETG00000048020)	ENSXETG00000001586	ENSXETG00000044333	nol11 (ENSXETG00000037191)	bptf (ENSXETG00000001592)	C17orf58 (ENSXETG00000049345)	kpna2 (ENSXETG00000001594)	smurf2 (ENSXETG00000012585)	cep95 (ENSXETG00000012584)	ddx5 (ENSXETG00000012580)	polg2 (ENSXETG00000012579) ##22	ENSXETG00000043745	pecam1 (ENSXETG00000012570)	tex2.2 (ENSXETG00000030925)	ern1 (ENSXETG00000049271)	XB5880825 [provisional:samd9l] (ENSXETG00000037621)	znf207 (ENSXETG00000026635)	c17orf75 (ENSXETG00000047294)	ENSXETG00000045511	RHBDL3 (ENSXETG00000047111)	rhot1 (ENSXETG00000020040)	ENSXETG00000049060	adap2 (ENSXETG00000043318)	tefm (ENSXETG00000020052)	atad5 (ENSXETG00000025818)	crlf3 (ENSXETG00000020053)
Leishan spiny toad	MODERN SPECIES	3	ENSLLEG00000030689	PRKCA (ENSLLEG00000030651)	CACNG5 (ENSLLEG00000030623)	CACNG4 (ENSLLEG00000030613)	CACNG1 (ENSLLEG00000030599)	HELZ (ENSLLEG00000030556)	PSMD12 (ENSLLEG00000030533)	PITPNC1 (ENSLLEG00000030516)	NOL11 (ENSLLEG00000030498)	BPTF (ENSLLEG00000030293)	ENSLLEG00000030218	ENSLLEG00000030005	SMURF2 (ENSLLEG00000029937)	CEP95 (ENSLLEG00000029869)	ENSLLEG00000029749	POLG2 (ENSLLEG00000029709) ##22	PECAM1 (ENSLLEG00000029667)	ENSLLEG00000029645	TEX2 (ENSLLEG00000029618)	ERN1 (ENSLLEG00000029537)	ZNF207 (ENSLLEG00000029487)	ENSLLEG00000029476	ENSLLEG00000029462	ENSLLEG00000029449	ENSLLEG00000029436	ENSLLEG00000029418	C17orf75 (ENSLLEG00000029398)	ENSLLEG00000029374	RHBDL3 (ENSLLEG00000029338)	RHOT1 (ENSLLEG00000028927)	ENSLLEG00000028861
Coelacanth	MODERN SPECIES	402		PRKCA (ENSLACG00000004445)	CACNG5 (ENSLACG00000009163)	CACNG4 (ENSLACG00000009794)	CACNG1 (ENSLACG00000010444)	HELZ (ENSLACG00000010742)	PSMD12 (ENSLACG00000012075)	PITPNC1 (ENSLACG00000013410)	NOL11 (ENSLACG00000013558)	BPTF (ENSLACG00000013815)	ENSLACG00000014275	kpna2 (ENSLACG00000014387)	SMURF2 (ENSLACG00000014496)	CEP95 (ENSLACG00000014850)	DDX5 (ENSLACG00000015051)	POLG2 (ENSLACG00000015134) ##22	ENSLACG00000015254	ENSLACG00000015378	TEX2 (ENSLACG00000015852)	ERN1 (ENSLACG00000016078)	ZNF207 (ENSLACG00000016289)	C17orf75 (ENSLACG00000022132)	RHBDL3 (ENSLACG00000016395)	RHOT1 (ENSLACG00000016689)	ENSLACG00000016797	ADAP2 (ENSLACG00000016830)	TEFM (ENSLACG00000016874)	ATAD5 (ENSLACG00000016892)	CRLF3 (ENSLACG00000017008)	SUZ12 (ENSLACG00000017067)	UTP6 (ENSLACG00000017158)
Actinopterygii	ANCESTRAL SPECIES	6	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.E	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00950000182803.A.a.b	ENSGT00940000155004	ENSGT00940000157809	ENSGT00940000154590	ENSGT00390000015916	ENSGT00390000009825	ENSGT00940000156278	ENSGT00390000015579.a.a.b	ENSGT00940000164514.a	ENSGT00390000009925.a	ENSGT00390000008825.a	ENSGT00940000157696	ENSGT00550000075071	ENSGT00390000002628
Neopterygii	ANCESTRAL SPECIES	19	ENSGT01050000244893.c.b.b	ENSGT00390000007786.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.E	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A	ENSGT00940000153759.a.b ##22	ENSGT01070000253837	ENSGT00940000163566.a.b	ENSGT00950000182803.A.a.b	ENSGT00940000155004	ENSGT00940000157809	ENSGT00940000154590	ENSGT00390000015916	ENSGT00390000009825	ENSGT00940000156278	ENSGT00390000015579.a.a.b	ENSGT00940000164514.a	ENSGT00390000009925.a	ENSGT00390000008825.a	ENSGT00940000157696	ENSGT00550000075071
Osteoglossocephalai	ANCESTRAL SPECIES	26	ENSGT00940000167917	ENSGT01050000244893.c.b.b.b	ENSGT00390000007786.a.b	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720.b.a	ENSGT00390000009760	ENSGT00940000154830	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864	ENSGT00940000155004	ENSGT00950000182803.A.a.b	ENSGT00940000163566.a.b	ENSGT00940000153470.a.b.b	ENSGT00940000155386	ENSGT00390000011880	ENSGT01060000248591.a.a.b.a.b
Clupeocephala	ANCESTRAL SPECIES	12	ENSGT00940000163144.a.a.b	ENSGT00940000163861.a	ENSGT00390000015826	ENSGT01050000244893.c.b.b.b	ENSGT00390000007786.a.b	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720.b.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000163566.a.b.a.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000155386.a	ENSGT00390000011880	ENSGT01060000248591.a.a.b.a.b
Otomorpha	ANCESTRAL SPECIES	4	ENSGT00940000157338.a	ENSGT00950000182933.B.b	ENSGT00390000000463.a	ENSGT00940000160720.b.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000154830.c	ENSGT01050000244891.E.a.b	ENSGT00940000155563.k.a	ENSGT00940000154705.A.a	ENSGT00940000153578.A.e	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000163566.a.b.b	ENSGT00950000182803.A.a.b.l	ENSGT00940000163566.a.b.a.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000155386.a
Clupeiformes	ANCESTRAL SPECIES	82					ENSGT00940000157338.a	ENSGT00950000182933.B.b	ENSGT00390000000463.a	ENSGT00940000160720.b.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.l	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00950000182803.A.a.b.l	ENSGT00940000163566.a.b.a.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000155386.a	ENSGT00950000182803.A.a.b.k.a	ENSGT00390000011880
Atlantic herring	MODERN SPECIES	18	PITPNC1 (ENSCHAG00000021899)	nol11 (ENSCHAG00000021822)	BPTF (ENSCHAG00000021387)	ENSCHAG00000021348	ENSCHAG00000021322	SMURF2 (ENSCHAG00000019736)	ENSCHAG00000019681	ENSCHAG00000019623	DDX5 (ENSCHAG00000019087)	ENSCHAG00000019018	ENSCHAG00000018864	srp68 (ENSCHAG00000018784)	RHBDF2 (ENSCHAG00000018618)	RHBDF2 (ENSCHAG00000018477)	acox1 (ENSCHAG00000016996)	POLG2 (ENSCHAG00000016902) ##22	srp68 (ENSCHAG00000016758)	evpla (ENSCHAG00000016602)	ten1 (ENSCHAG00000016589)	acox1 (ENSCHAG00000015871)	RHBDF2 (ENSCHAG00000015673)	aanat1 (ENSCHAG00000015652)	UBE2O (ENSCHAG00000015566)	SPHK1 (ENSCHAG00000015490)	UBE2O (ENSCHAG00000015411)	SPHK1 (ENSCHAG00000015354)	cygb2 (ENSCHAG00000015325)	ENSCHAG00000015299	PRPSAP1 (ENSCHAG00000015256)	PRPSAP1 (ENSCHAG00000015124)	ENSCHAG00000015101
Denticle herring	MODERN SPECIES	13	cacng5a (ENSDCDG00000034053)	prkcaa (ENSDCDG00000033838)	APOH (ENSDCDG00000033805)	ENSDCDG00000033802	AXIN2 (ENSDCDG00000033797)	ENSDCDG00000033793	TEX2 (ENSDCDG00000033773)	ENSDCDG00000033746	nol11 (ENSDCDG00000033731)	BPTF (ENSDCDG00000033721)	C17orf58 (ENSDCDG00000033713)	ENSDCDG00000033710	SMURF2 (ENSDCDG00000033228)	CEP95 (ENSDCDG00000033186)	DDX5 (ENSDCDG00000033167)	POLG2 (ENSDCDG00000033143) ##22	srp68 (ENSDCDG00000033093)	evpla (ENSDCDG00000033082)	ten1 (ENSDCDG00000033076)	acox1 (ENSDCDG00000032412)	RHBDF2 (ENSDCDG00000032294)	AANAT (ENSDCDG00000032285)	UBE2O (ENSDCDG00000032187)	SPHK1 (ENSDCDG00000032173)	cygb2 (ENSDCDG00000032167)	PRPSAP1 (ENSDCDG00000032148)	ENSDCDG00000032147	ddx17 (ENSDCDG00000031724)	NTAN1 (ENSDCDG00000031697)	ENSDCDG00000031688	bmerb1 (ENSDCDG00000031691)
Otophysi	ANCESTRAL SPECIES	8	ENSGT01050000244893.c.b.b.a	ENSGT01050000244961.a.a.a	ENSGT00940000156104.B	ENSGT00940000157228.i.a	ENSGT00940000157338.a	ENSGT00950000182933.B.b	ENSGT00390000000463.a	ENSGT00940000160720.b.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.a.b	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000163566.a.b.a.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000155386.a	ENSGT00390000011880	ENSGT01060000248591.a.a.b.a.b
Characiphysae	ANCESTRAL SPECIES	18	ENSGT01050000244893.c.b.b.a	ENSGT01050000244961.a.a.a	ENSGT00940000156104.B.m	ENSGT00940000157228.i.a	ENSGT00940000157338.a	ENSGT00950000182933.B.b	ENSGT00390000000463.a	ENSGT00940000160720.b.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.a.b	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000154622.a.b.s	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000163566.a.b.a.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000155386.a	ENSGT00390000011880
Characiphysae_b	ANCESTRAL SPECIES	46	ENSGT01050000244893.c.b.b.a	ENSGT01050000244961.a.a.a	ENSGT00940000156104.B.m	ENSGT00940000157228.i.a	ENSGT00940000157338.a	ENSGT00950000182933.B.b	ENSGT00390000000463.a	ENSGT00940000160720.b.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.a.b	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000154622.a.b.s	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000163566.a.b.a.a	ENSGT00940000153470.a.b.b.m.a
Characoidei	ANCESTRAL SPECIES	23	ENSGT01050000244893.c.b.b.a	ENSGT01050000244961.a.a.a	ENSGT00940000156104.B.m	ENSGT00940000157228.i.a	ENSGT00940000157338.a	ENSGT00950000182933.B.b	ENSGT00390000000463.a	ENSGT00940000160720.b.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.a.b	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000154622.a.b.s	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000163566.a.b.a.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000163727.q.a.a.a.a.a	ENSGT00940000163727.q.a.a.a.b
Red-bellied piranha	MODERN SPECIES	25	CACNG4 (ENSPNAG00000029846)	cacng5a (ENSPNAG00000029835)	prkcaa (ENSPNAG00000029815)	APOH (ENSPNAG00000029795)	AXIN2 (ENSPNAG00000029785)	ENSPNAG00000029764	TEX2 (ENSPNAG00000029752)	PITPNC1 (ENSPNAG00000029718)	nol11 (ENSPNAG00000029693)	BPTF (ENSPNAG00000005705)	ENSPNAG00000005002	ENSPNAG00000006405	SMURF2 (ENSPNAG00000029512)	CEP95 (ENSPNAG00000006403)	DDX5 (ENSPNAG00000029431)	POLG2 (ENSPNAG00000029339) ##22	srp68 (ENSPNAG00000006798)	evpla (ENSPNAG00000004536)	ten1 (ENSPNAG00000029089)	acox1 (ENSPNAG00000029060)	RHBDF2 (ENSPNAG00000005352)	aanat1 (ENSPNAG00000028897)	ENSPNAG00000028854	UBE2O (ENSPNAG00000004439)	SPHK1 (ENSPNAG00000006932)	cygb2 (ENSPNAG00000028671)	prpsap1 (ENSPNAG00000028660)	ENSPNAG00000005318	MGAT5B (ENSPNAG00000028590)	ENSPNAG00000028503	ENSPNAG00000006492
Mexicana tetra	MODERN SPECIES	4	mybphb (ENSAMXG00000000680)	SYT2 (ENSAMXG00000000707)	manbal (ENSAMXG00000038402)	ENSAMXG00000000747	AXIN2 (ENSAMXG00000015178)	ENSAMXG00000026305	TEX2 (ENSAMXG00000015207)	PITPNC1 (ENSAMXG00000015250)	nol11 (ENSAMXG00000015289)	BPTF (ENSAMXG00000015334)	ENSAMXG00000015395	ENSAMXG00000015416	SMURF2 (ENSAMXG00000015460)	CEP95 (ENSAMXG00000015514)	DDX5 (ENSAMXG00000015550)	POLG2 (ENSAMXG00000030889) ##22	srp68 (ENSAMXG00000035069)	evpla (ENSAMXG00000015605)	ten1 (ENSAMXG00000037327)	acox1 (ENSAMXG00000015678)	RHBDF2 (ENSAMXG00000015710)	ENSAMXG00000035338	aanat1 (ENSAMXG00000015728)	ENSAMXG00000036382	UBE2O (ENSAMXG00000015772)	SPHK1 (ENSAMXG00000015796)	ENSAMXG00000041726	cygb2 (ENSAMXG00000035429)	prpsap1 (ENSAMXG00000043191)	ENSAMXG00000026306	pltp (ENSAMXG00000000799)
Channel catfish	MODERN SPECIES	3	ENSIPUG00000015408	cacng5 (ENSIPUG00000015392)	PRKCA (ENSIPUG00000015287)	APOH (ENSIPUG00000015247)	axin2 (ENSIPUG00000015211)	myadm (ENSIPUG00000015201)	tex2 (ENSIPUG00000015105)	pitpnc1 (ENSIPUG00000015024)	nol11 (ENSIPUG00000014968)	bptf (ENSIPUG00000014717)	ENSIPUG00000014692	kpna2 (ENSIPUG00000014666)	SMURF2 (ENSIPUG00000014543)	cep95 (ENSIPUG00000014504)	ddx5 (ENSIPUG00000014448)	polg2 (ENSIPUG00000014424) ##22	SRP68 (ENSIPUG00000014365)	evpl (ENSIPUG00000014268)	ten1 (ENSIPUG00000014240)	Acox1 (ENSIPUG00000014161)	rhbdf2 (ENSIPUG00000014071)	aanat (ENSIPUG00000014037)	ENSIPUG00000014017	ube2o (ENSIPUG00000013940)	pnkd (ENSIPUG00000013907)	catip (ENSIPUG00000013888)	casp20 (ENSIPUG00000013871)	dytn (ENSIPUG00000013845)	casp8 (ENSIPUG00000013783)	adam23 (ENSIPUG00000013806)	ENSIPUG00000013772
Cyprinoidei	ANCESTRAL SPECIES	206														ENSGT00390000009760	ENSGT00390000005412	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000153759.a.b ##22
Goldfish	MODERN SPECIES	551															ENSCARG00000043581	POLG2 (ENSCARG00000043590) ##22	ENSCARG00000043646	ENSCARG00000043652	ENSCARG00000043661	ENSCARG00000043670
Cyprininae_a	ANCESTRAL SPECIES	10	ENSGT00940000160913.o	ENSGT00940000160049	ENSGT00940000156448.a.a.b	ENSGT00950000183091.B.a.a	ENSGT00940000158931.j	ENSGT00390000001414	ENSGT00940000155004.s	ENSGT00940000157864.a.a	ENSGT00940000160755	ENSGT00390000015579.a.a.a	ENSGT00940000159027	ENSGT00940000157287	ENSGT00390000017589	ENSGT00940000153578.A.f	ENSGT00390000011856	ENSGT00940000153759.a.b ##22	ENSGT00390000005412	ENSGT00390000009760.g	ENSGT00940000155386.a	ENSGT01060000248591.a.a.b.a.b.b	ENSGT00640000091541.ab	ENSGT00390000011880	ENSGT01060000248591.a.a.b.a.b.a	ENSGT00640000091541.`b	ENSGT01070000253837.c.b	ENSGT00940000157351.b	ENSGT00940000159603.b.b	ENSGT00940000161850.r.a.b	ENSGT00550000075186	ENSGT00440000035688.g	ENSGT00940000160777.i.b
Golden-line barbel	MODERN SPECIES	765							cratb (ENSSGRG00000014110)	ENSSGRG00000014106	p3h4 (ENSSGRG00000014104)	aanat1 (ENSSGRG00000014102)	RHBDF2 (ENSSGRG00000013793)	acox1 (ENSSGRG00000012703)	ten1 (ENSSGRG00000012677)	evpla (ENSSGRG00000012632)	srp68 (ENSSGRG00000012271)	POLG2 (ENSSGRG00000012266) ##22	ENSSGRG00000012260
Common carp reference	MODERN SPECIES	16	rae1 (ENSCCRG00000023205)	uqcrc1 (ENSCCRG00000026227)	nprl2 (ENSCCRG00000026301)	ENSCCRG00000072825	ENSCCRG00000074757	ENSCCRG00000069354	ENSCCRG00000055365	SPHK1 (ENSCCRG00000024639)	UBE2O (ENSCCRG00000024405)	aanat1 (ENSCCRG00000055813)	RHBDF2 (ENSCCRG00000059864)	acox1 (ENSCCRG00000031804)	ENSCCRG00000080611	evpla (ENSCCRG00000043481)	srp68 (ENSCCRG00000021664)	ENSCCRG00000006782 ##22	ENSCCRG00000081933	ENSCCRG00000056433	ENSCCRG00000038511	ENSCCRG00000069564	ENSCCRG00000060660	ENSCCRG00000059310	ENSCCRG00000077452	ENDOV (ENSCCRG00000081406)	ENSCCRG00000074176	ENSCCRG00000068038	RPTOR (ENSCCRG00000032204)	P4HB (ENSCCRG00000005878)	ENSCCRG00000005882	MCRIP1 (ENSCCRG00000005888)	anapc11 (ENSCCRG00000005895)
Zebrafish	MODERN SPECIES	21	SETD5 (ENSDARG00000078576)	si:dkey-19e4.5 (ENSDARG00000089886)	ENSDARG00000017211	thumpd3 (ENSDARG00000059634)	ENSDARG00000052351	cfap100 (ENSDARG00000111474)	aldh1l1 (ENSDARG00000077004)	ddx17 (ENSDARG00000010873)	gga1 (ENSDARG00000038537)	rae1 (ENSDARG00000007196)	uqcrc1 (ENSDARG00000052304)	nprl2 (ENSDARG00000059613)	cygb2 (ENSDARG00000070148)	ENSDARG00000052288	nol11 (ENSDARG00000026767)	POLG2 (ENSDARG00000074933) ##22	srp68 (ENSDARG00000020820)	evpla (ENSDARG00000019808)	ten1 (ENSDARG00000097346)	acox1 (ENSDARG00000014727)	aanat1 (ENSDARG00000036567)	pik3r6a (ENSDARG00000100336)	glulb (ENSDARG00000100003)	ZNF648 (ENSDARG00000104823)	ENSDARG00000099554	gadd45ab (ENSDARG00000104571)	GNG12 (ENSDARG00000098123)	dr1 (ENSDARG00000105098)	RDH8 (ENSDARG00000099217)	scinla (ENSDARG00000102415)	ENSDARG00000101586
Euteleosteomorpha	ANCESTRAL SPECIES	18	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870	ENSGT00940000160720.b.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000163566.a.b.a.a	ENSGT00740000117013	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000155386.a	ENSGT00940000168473
Protacanthopterygii	ANCESTRAL SPECIES	76													ENSGT00940000155563.k.b.a.a	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT01070000253837.c	ENSGT00940000157351	ENSGT00940000159603.b	ENSGT00550000075186	ENSGT00390000018868.B.b	ENSGT00390000006233.c.b.z	ENSGT00940000161425	ENSGT00390000002761	ENSGT00940000154838.A.f.b.a	ENSGT00390000008798.d.a	ENSGT00390000013474.b.a ##15	ENSGT00940000161498	ENSGT00440000039055	ENSGT00550000074820	ENSGT00940000159874
Salmoninae	ANCESTRAL SPECIES	432													ENSGT00940000155563.k.b.a.a.b	ENSGT00390000005412.q.b	ENSGT00940000154705.A.b.a	ENSGT00940000153759.a.b ##22	ENSGT00390000011856.i	ENSGT00940000153578.A.f.f	ENSGT00390000017589.g	ENSGT00940000157287.o.b	ENSGT00940000159027.c.b.b	ENSGT00390000015579.a.a.a.c	ENSGT00940000160755.e	ENSGT00940000157864.a.a.i	ENSGT00940000155004.s.d	ENSGT00950000182803.A.a.b.k.a.c	ENSGT00940000163566.a.b.a.a.d	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.a	ENSGT00940000153470.a.b.b.m.a.a.a.b	ENSGT00940000155386.a.n	ENSGT00390000011880
Huchen	MODERN SPECIES	2532															DDX5 (ENSHHUG00000050425)	POLG2 (ENSHHUG00000050412) ##22	srp68 (ENSHHUG00000050395)	evpla (ENSHHUG00000050391)	ten1 (ENSHHUG00000050387)	acox1 (ENSHHUG00000050225)	RHBDF2 (ENSHHUG00000050185)	aanat1 (ENSHHUG00000050155)	ENSHHUG00000050144
Salmoninae_a	ANCESTRAL SPECIES	58	ENSGT00940000158476.a.a.a	ENSGT00390000006555.c.a	ENSGT00940000158604.d	ENSGT00940000164979.g	ENSGT00940000165433.d	ENSGT00940000158718.a.a.d	ENSGT00390000000976.c.a	ENSGT00950000183036.b.e.d	ENSGT00990000204804.a	ENSGT00940000162287.A.i.b.g.a	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.b.a.a.b	ENSGT00940000154446.a.h.b	ENSGT00940000155563.k.b.a.a.b	ENSGT00390000005412.q.b	ENSGT00940000154705.A.b.a	ENSGT00940000153759.a.b ##22	ENSGT00390000011856.i	ENSGT00940000153578.A.f.f	ENSGT00390000017589.g	ENSGT00940000157287.o.b	ENSGT00940000159027.c.b.a	ENSGT00390000015579.a.a.a.c	ENSGT00940000160755.e	ENSGT00940000157864.a.a.i	ENSGT00990000211636	ENSGT00940000155004.s.d	ENSGT00950000182803.A.a.b.k.a.c	ENSGT00940000163566.a.b.a.a.d	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.a	ENSGT00940000153470.a.b.b.m.a.a.a.a	ENSGT00940000155386.a.n
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00940000166520.i.a.a	ENSGT00940000160081.c.a.n	ENSGT00940000158476.a.a.b	ENSGT00390000006555.c.b	ENSGT00940000158604.c	ENSGT00940000164979.h	ENSGT00940000165433.c	ENSGT00940000158718.a.a.c.a	ENSGT00390000000976.c.a.a.a	ENSGT00950000183036.b.e.c	ENSGT00990000204804.b	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.b.a.b	ENSGT00940000155563.k.b.a.a.a	ENSGT00390000005412.q.a	ENSGT00940000154705.A.b.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856.j	ENSGT00940000153578.A.f.e	ENSGT00390000017589.h	ENSGT00940000157287.o.a	ENSGT00940000159027.d	ENSGT00390000015579.a.a.a.d	ENSGT00940000160755.f	ENSGT00940000157864.a.a.j.b.a	ENSGT00940000155004.s.c	ENSGT00950000182803.A.a.b.k.a.d	ENSGT00940000163566.a.b.a.a.c	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.b	ENSGT00940000155386.a.m	ENSGT00940000168473	ENSGT01060000248591.a.a.b.a.b.c
Oncorhynchus_a	ANCESTRAL SPECIES	3	ENSGT00940000166520.i.a.a	ENSGT00940000160081.c.a.n	ENSGT00940000158476.a.a.b	ENSGT00390000006555.c.b	ENSGT00940000158604.c	ENSGT00940000164979.h	ENSGT00940000165433.c	ENSGT00940000158718.a.a.c.a	ENSGT00390000000976.c.a.a.a	ENSGT00950000183036.b.e.c	ENSGT00990000204804.b	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.b.a.b	ENSGT00940000155563.k.b.a.a.a	ENSGT00390000005412.q.a	ENSGT00940000154705.A.b.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856.j	ENSGT00940000153578.A.f.e	ENSGT00390000017589.h	ENSGT00940000157287.o.a	ENSGT00940000157287.p	ENSGT00940000159027.d	ENSGT00390000015579.a.a.a.d	ENSGT00940000160755.f	ENSGT00940000157864.a.a.j.b.a	ENSGT00940000155386.a.m	ENSGT00940000168473	ENSGT01060000248591.a.a.b.a.b.c	ENSGT00640000091541.z.a.a	ENSGT00940000169618	ENSGT00940000157351.d
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	2905	ENSOTSG00005041058	CBX4 (ENSOTSG00005041056)	cbx8b (ENSOTSG00005041055)	si:dkey-31g6.6 (ENSOTSG00005041054)	dgke (ENSOTSG00005040950)	trim25 (ENSOTSG00005040946)	ENSOTSG00005040943	pglyrp2 (ENSOTSG00005040942)	TRAPPC5 (ENSOTSG00005040941)	mcoln1a (ENSOTSG00005036668)	ENSOTSG00005036650	ENSOTSG00005036648	SMURF2 (ENSOTSG00005036642)	CEP95 (ENSOTSG00005036638)	DDX5 (ENSOTSG00005036636)	POLG2 (ENSOTSG00005036635) ##22	srp68 (ENSOTSG00005036550)	evpla (ENSOTSG00005036546)	ten1 (ENSOTSG00005036545)	acox1 (ENSOTSG00005029579)	ENSOTSG00005029574	UBE2O (ENSOTSG00005029567)	SPHK1 (ENSOTSG00005029563)	ENSOTSG00005029562	cygb2 (ENSOTSG00005029559)	PRPSAP1 (ENSOTSG00005028901)	ENSOTSG00005028890	ENSOTSG00005028889	MGAT5B (ENSOTSG00005028886)	ENSOTSG00005028883	ENSOTSG00005028881
Chinook salmon	MODERN SPECIES	11	ENSOTSG00005005594	CBX4 (ENSOTSG00005005591)	cbx8b (ENSOTSG00005005590)	si:dkey-31g6.6 (ENSOTSG00005005589)	dgke (ENSOTSG00005005321)	trim25 (ENSOTSG00005005314)	ENSOTSG00005005311	pglyrp2 (ENSOTSG00005005305)	TRAPPC5 (ENSOTSG00005005303)	mcoln1a (ENSOTSG00005000306)	ENSOTSG00005000289	ENSOTSG00005000287	SMURF2 (ENSOTSG00005000278)	CEP95 (ENSOTSG00005000270)	DDX5 (ENSOTSG00005000260)	POLG2 (ENSOTSG00005000257) ##22	srp68 (ENSOTSG00005000256)	ten1 (ENSOTSG00005000253)	acox1 (ENSOTSG00005000194)	RHBDF2 (ENSOTSG00005000165)	ENSOTSG00005000159	UBE2O (ENSOTSG00005000146)	SPHK1 (ENSOTSG00005000143)	cygb2 (ENSOTSG00005000141)	PRPSAP1 (ENSOTSG00005000109)	ENSOTSG00005000063	ENSOTSG00005000049	MGAT5B (ENSOTSG00005027498)	ENSOTSG00005027497	ENSOTSG00005027495	ENSOTSG00005027494
Coho salmon	MODERN SPECIES		trim25 (ENSOKIG00005048532)	ENSOKIG00005048543	ENSOKIG00005048558	pglyrp2 (ENSOKIG00005048568)	ENSOKIG00005048577	ENSOKIG00005000042	ENSOKIG00005000049	ENSOKIG00005000115	mcoln1a (ENSOKIG00005000188)	ENSOKIG00005000240	ENSOKIG00005000247	ENSOKIG00005000251	SMURF2 (ENSOKIG00005000334)	CEP95 (ENSOKIG00005000463)	DDX5 (ENSOKIG00005000588)	POLG2 (ENSOKIG00005000753) ##22	srp68 (ENSOKIG00005000777)	evpla (ENSOKIG00005000791)	ten1 (ENSOKIG00005000804)	acox1 (ENSOKIG00005000856)	RHBDF2 (ENSOKIG00005001037)	aanat1 (ENSOKIG00005001060)	UBE2O (ENSOKIG00005001071)	SPHK1 (ENSOKIG00005001102)	cygb2 (ENSOKIG00005001105)	PRPSAP1 (ENSOKIG00005001144)	ENSOKIG00005001224	ENSOKIG00005001226	MGAT5B (ENSOKIG00005001240)	ENSOKIG00005001264	ENSOKIG00005001381
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000014677	cbx8b (ENSOMYG00000014656)	si:dkey-31g6.6 (ENSOMYG00000014647)	dgke (ENSOMYG00000014491)	trim25 (ENSOMYG00000014444)	ENSOMYG00000014411	ENSOMYG00000014398	ENSOMYG00000014388	ENSOMYG00000014037	ENSOMYG00000013644	ENSOMYG00000013517	ENSOMYG00000013512	SMURF2 (ENSOMYG00000010322)	CEP95 (ENSOMYG00000008632)	DDX5 (ENSOMYG00000008949)	POLG2 (ENSOMYG00000008569) ##22	srp68 (ENSOMYG00000008012)	evpla (ENSOMYG00000007409)	ten1 (ENSOMYG00000007398)	acox1 (ENSOMYG00000007015)	RHBDF2 (ENSOMYG00000006016)	UBE2O (ENSOMYG00000005671)	SPHK1 (ENSOMYG00000050116)	ENSOMYG00000005350	PRPSAP1 (ENSOMYG00000005259)	ENSOMYG00000020159	ENSOMYG00000020158	ENSOMYG00000049580	ENSOMYG00000048983	ENSOMYG00000020133	ENSOMYG00000014527
Salmo	ANCESTRAL SPECIES	37	ENSGT00940000158476.a.a.a	ENSGT00390000006555.d	ENSGT00940000158604.d	ENSGT00940000164979.g	ENSGT00940000165433.d	ENSGT00940000158718.a.a.d	ENSGT00390000000976.c.a	ENSGT00950000183036.b.e.d	ENSGT00990000204804.a	ENSGT00940000162287.A.i.b.g.a	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.b.a.a.b	ENSGT00940000154446.a.h.b	ENSGT00940000155563.k.b.a.a.b	ENSGT00390000005412.q.b	ENSGT00940000154705.A.b.a	ENSGT00940000153759.a.b ##22	ENSGT00390000011856.i	ENSGT00940000153578.A.f.f	ENSGT00390000017589.g	ENSGT00940000157287.o.b	ENSGT00940000159027.c.a	ENSGT00390000015579.a.a.a.c	ENSGT00940000160755.e	ENSGT00940000157864.a.a.i	ENSGT00990000211636	ENSGT00940000155004.s.d	ENSGT00950000182803.A.a.b.k.a.c	ENSGT00940000163566.a.b.a.a.d	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.a	ENSGT00940000153470.a.b.b.m.a.a.a.a	ENSGT00940000153470.a.b.b.m.a.a.a.b
Atlantic salmon	MODERN SPECIES	11	cbx8b (ENSSSAG00000046122)	dgke (ENSSSAG00000116514)	trim25 (ENSSSAG00000054152)	ENSSSAG00000082759	ENSSSAG00000046853	ENSSSAG00000046883	TPPC5 (ENSSSAG00000046892)	ENSSSAG00000046937	ENSSSAG00000047186	ENSSSAG00000082700	ENSSSAG00000097115	ENSSSAG00000047191	SMURF2 (ENSSSAG00000047242)	CEP95 (ENSSSAG00000048278)	DDX5 (ENSSSAG00000082802)	POLG2 (ENSSSAG00000109515) ##22	srp68 (ENSSSAG00000036209)	evpla (ENSSSAG00000048370)	ENSSSAG00000111716	acox1 (ENSSSAG00000039321)	RHBDF2 (ENSSSAG00000085604)	aanat (ENSSSAG00000084633)	UBE2O (ENSSSAG00000040096)	SPHK1 (ENSSSAG00000087908)	ENSSSAG00000044115	ENSSSAG00000044124	PRPSAP1 (ENSSSAG00000044155)	ENSSSAG00000101428	ENSSSAG00000104300	ENSSSAG00000045791	ENSSSAG00000045875
River trout	MODERN SPECIES	5	CBX4 (ENSSTUG00000033465)	cbx8b (ENSSTUG00000033482)	si:dkey-31g6.6 (ENSSTUG00000033505)	dgke (ENSSTUG00000033527)	trim25 (ENSSTUG00000033694)	ENSSTUG00000033723	pglyrp2 (ENSSTUG00000033832)	TRAPPC5 (ENSSTUG00000033843)	mcoln1a (ENSSTUG00000033888)	ENSSTUG00000035399	ENSSTUG00000035416	ENSSTUG00000035419	SMURF2 (ENSSTUG00000035451)	CEP95 (ENSSTUG00000036096)	DDX5 (ENSSTUG00000036181)	POLG2 (ENSSTUG00000039397) ##22	srp68 (ENSSTUG00000039398)	evpla (ENSSTUG00000039505)	ENSSTUG00000039587	acox1 (ENSSTUG00000039621)	RHBDF2 (ENSSTUG00000042665)	aanat1 (ENSSTUG00000043229)	UBE2O (ENSSTUG00000043261)	SPHK1 (ENSSTUG00000043324)	cygb2 (ENSSTUG00000043331)	PRPSAP1 (ENSSTUG00000043356)	ENSSTUG00000043550	ENSSTUG00000043558	ENSSTUG00000043572	MGAT5B (ENSSTUG00000043581)	ENSSTUG00000043608
Northern pike	MODERN SPECIES	8	DDX39A (ENSELUG00000006779)	EVI5L (ENSELUG00000006910)	ENSELUG00000030302	ENSELUG00000006948	ENSELUG00000032480	ENSELUG00000028132	rhot1b (ENSELUG00000000243)	rhbdl3 (ENSELUG00000007113)	znf207b (ENSELUG00000007167)	ENSELUG00000007206	septin9b (ENSELUG00000007255)	ENSELUG00000030348	SMURF2 (ENSELUG00000007365)	CEP95 (ENSELUG00000007540)	DDX5 (ENSELUG00000007424)	POLG2 (ENSELUG00000007591) ##22	srp68 (ENSELUG00000007653)	evpla (ENSELUG00000007680)	ENSELUG00000007704	acox1 (ENSELUG00000007744)	RHBDF2 (ENSELUG00000007849)	aanat (ENSELUG00000007915)	UBE2O (ENSELUG00000007975)	SPHK1 (ENSELUG00000008009)	cygb2 (ENSELUG00000008042)	ENSELUG00000008018	PRPSAP1 (ENSELUG00000008090)	ENSELUG00000008115	ENSELUG00000027599	MGAT5B (ENSELUG00000008209)	ENSELUG00000029412
Acanthomorphata	ANCESTRAL SPECIES	40									ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000163566.a.b.a.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000163460.b	ENSGT00940000165172.b	ENSGT00940000154912.u.a
Euacanthomorphacea	ANCESTRAL SPECIES	3	ENSGT00950000183116.b.a.a.b.a.b	ENSGT00940000156104.B	ENSGT00940000157228.i.a	ENSGT00980000199396	ENSGT00940000163520.A.a.a.b	ENSGT00940000155217.p	ENSGT00940000157228.i.b	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000163566.a.b.a.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000163460.b	ENSGT00940000165172.b	ENSGT00940000154912.u.a
Percomorphaceae	ANCESTRAL SPECIES	20	ENSGT00940000163520.A.a.a.a.a.a.a.h	ENSGT00950000183116.b.a.a.b.a.b	ENSGT00940000156104.B	ENSGT00980000199396	ENSGT00940000163520.A.a.a.b	ENSGT00940000155217.p	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s
Tiger tail seahorse	MODERN SPECIES	257	ENSHCOG00000019682	psmd12 (ENSHCOG00000000525)	helz (ENSHCOG00000019617)	cacng1a (ENSHCOG00000019475)	CACNG4 (ENSHCOG00000019462)	cacng5a (ENSHCOG00000019432)	prkcaa (ENSHCOG00000019411)	APOH (ENSHCOG00000000654)	nol11 (ENSHCOG00000019366)	BPTF (ENSHCOG00000019348)	C17orf58 (ENSHCOG00000019266)	SMURF2 (ENSHCOG00000019246)	CEP95 (ENSHCOG00000019198)	ENSHCOG00000019173	DDX5 (ENSHCOG00000019168)	POLG2 (ENSHCOG00000019138) ##22	srp68 (ENSHCOG00000019126)	evpla (ENSHCOG00000019027)	ten1 (ENSHCOG00000019014)	acox1 (ENSHCOG00000018954)	RHBDF2 (ENSHCOG00000018925)	aanat1 (ENSHCOG00000018838)	UBE2O (ENSHCOG00000018812)	SPHK1 (ENSHCOG00000018734)	ENSHCOG00000018729	cygb2 (ENSHCOG00000000607)	cygb2 (ENSHCOG00000000633)	ndnl2 (ENSHCOG00000000653)	ENSHCOG00000018677	ENSHCOG00000018667	dhx15 (ENSHCOG00000018653)
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00940000163520.A.a.a.b.c	ENSGT00940000155217.p	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT01030000235173	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT01030000235173	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00940000163520.A.a.a.b.c	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT01030000235173	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Anabantaria	ANCESTRAL SPECIES	1	ENSGT01050000244893.c.b.b.a	ENSGT01050000244961.a.a.a	ENSGT00940000156104.B	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Anabantoidei	ANCESTRAL SPECIES		ENSGT00390000007786.a.a	ENSGT01050000244893.c.b.b.a	ENSGT01050000244961.a.a.a	ENSGT00940000156104.B	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.k.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.l	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Climbing perch	MODERN SPECIES		ENSATEG00000006181	ENSATEG00000006433	ENSATEG00000006386	ENSATEG00000006272	ENSATEG00000006337	ENSATEG00000006257	ENSATEG00000006289	ENSATEG00000029717	ENSATEG00000027734	ENSATEG00000026703	ENSATEG00000006162	ENSATEG00000006081	ENSATEG00000025608	ENSATEG00000006004	ENSATEG00000005840	ENSATEG00000005834 ##22	srp68 (ENSATEG00000005737)	evpla (ENSATEG00000005726)	ten1 (ENSATEG00000005676)	acox1 (ENSATEG00000005659)	RHBDF2 (ENSATEG00000005563)	aanat1 (ENSATEG00000005531)	UBE2O (ENSATEG00000005412)	SPHK1 (ENSATEG00000025777)	ENSATEG00000005379	ENSATEG00000005238	ubn2a (ENSATEG00000005150)	ttc26 (ENSATEG00000005064)	ENSATEG00000005054	slc25a38b (ENSATEG00000005048)	myh9a (ENSATEG00000004883)
Siamese fighting fish	MODERN SPECIES		ENSBSLG00000000142	ENSBSLG00000000162	ENSBSLG00000000169	ENSBSLG00000000178	ENSBSLG00000000188	ENSBSLG00000000199	ENSBSLG00000000202	ENSBSLG00000000216	ENSBSLG00000000221	ENSBSLG00000000233	ENSBSLG00000000241	ENSBSLG00000000247	ENSBSLG00000000253	ENSBSLG00000000341	DDX5 (ENSBSLG00000000927)	POLG2 (ENSBSLG00000001452) ##22	srp68 (ENSBSLG00000001726)	evpla (ENSBSLG00000002144)	ten1 (ENSBSLG00000002177)	acox1 (ENSBSLG00000002863)	RHBDF2 (ENSBSLG00000003214)	aanat1 (ENSBSLG00000003223)	UBE2O (ENSBSLG00000003848)	SPHK1 (ENSBSLG00000004291)	cygb2 (ENSBSLG00000004740)	ENSBSLG00000005597	ubn2a (ENSBSLG00000007576)	ttc26 (ENSBSLG00000008027)	ENSBSLG00000008577	slc25a38b (ENSBSLG00000008610)	myh9a (ENSBSLG00000008626)
Zig-zag eel	MODERN SPECIES		PRKCA (ENSMAMG00000016234)	APOH (ENSMAMG00000016323)	APOH (ENSMAMG00000016344)	NOL11 (ENSMAMG00000016355)	ENSMAMG00000016371	ENSMAMG00000016383	ENSMAMG00000016391	SMURF2 (ENSMAMG00000016433)	ENSMAMG00000027706	CEP95 (ENSMAMG00000016480)	ENSMAMG00000016489	ENSMAMG00000016501	ENSMAMG00000025867	ENSMAMG00000016506	DDX5 (ENSMAMG00000025056)	POLG2 (ENSMAMG00000016568) ##22	srp68 (ENSMAMG00000016621)	ENSMAMG00000016656	evpla (ENSMAMG00000016667)	ten1 (ENSMAMG00000016767)	acox1 (ENSMAMG00000016796)	RHBDF2 (ENSMAMG00000016810)	aanat1 (ENSMAMG00000016822)	UBE2O (ENSMAMG00000016833)	SPHK1 (ENSMAMG00000028412)	ENSMAMG00000016863	ENSMAMG00000016876	ubn2a (ENSMAMG00000016946)	ttc26 (ENSMAMG00000016960)	ENSMAMG00000017002	SLC25A38 (ENSMAMG00000017013)
Carangaria	ANCESTRAL SPECIES		ENSGT01050000244961.a.a.a	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT00940000156104.B	ENSGT00940000163520.A.a.a.b.c	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT01030000235173.a.a	ENSGT00390000005412	ENSGT01020000230338.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT01000000218899	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Carangaria_A	ANCESTRAL SPECIES	14														ENSGT01020000230338.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT01000000218899	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Seriola	ANCESTRAL SPECIES	11	ENSGT00940000172399	ENSGT00390000017614.e.a.e.a.x	ENSGT00390000017614.e.a.e.a.w	ENSGT00390000017614.e.a.e.b	ENSGT00940000158718.a.a	ENSGT00390000000976.d.a	ENSGT00950000183036.b.e	ENSGT01030000234900	ENSGT00390000009916	ENSGT00940000154990.fb.a	ENSGT00940000158914	ENSGT00940000155632.p	ENSGT00550000075117.m.a	ENSGT01020000230338.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.i.b
Greater amberjack	MODERN SPECIES	170	ENSSDUG00000020127	ENSSDUG00000020118	ENSSDUG00000019941	pglyrp2 (ENSSDUG00000019916)	trappc5 (ENSSDUG00000019904)	mcoln1a (ENSSDUG00000019887)	ENSSDUG00000019884	si:ch211-214c7.5 (ENSSDUG00000019874)	PKN1 (ENSSDUG00000019793)	map2k7 (ENSSDUG00000019715)	myh9a (ENSSDUG00000019536)	slc25a38b (ENSSDUG00000019499)	ENSSDUG00000019491	ENSSDUG00000019481	DDX5 (ENSSDUG00000019456)	POLG2 (ENSSDUG00000019446) ##22	srp68 (ENSSDUG00000019406)	evpla (ENSSDUG00000019295)	ten1 (ENSSDUG00000019278)	acox1 (ENSSDUG00000019228)	RHBDF2 (ENSSDUG00000019103)	aanat1 (ENSSDUG00000019079)	UBE2O (ENSSDUG00000019037)	SPHK1 (ENSSDUG00000019030)	cygb2 (ENSSDUG00000019006)	ENSSDUG00000018996	ENSSDUG00000018917	ubn2a (ENSSDUG00000018740)	ttc26 (ENSSDUG00000018661)	ENSSDUG00000018641	ENSSDUG00000018630
Yellowtail amberjack	MODERN SPECIES	2900	ENSSLDG00000003001	ENSSLDG00000003011	ENSSLDG00000003031	ENSSLDG00000003044	pglyrp2 (ENSSLDG00000003069)	trappc5 (ENSSLDG00000003084)	mcoln1a (ENSSLDG00000003108)	ENSSLDG00000003126	si:ch211-214c7.5 (ENSSLDG00000003141)	PKN1 (ENSSLDG00000003191)	map2k7 (ENSSLDG00000003284)	myh9a (ENSSLDG00000003398)	slc25a38b (ENSSLDG00000003536)	ENSSLDG00000003564	DDX5 (ENSSLDG00000003614)	POLG2 (ENSSLDG00000003723) ##22	srp68 (ENSSLDG00000003834)	ENSSLDG00000003880	evpla (ENSSLDG00000003925)	ten1 (ENSSLDG00000004078)	acox1 (ENSSLDG00000004221)	RHBDF2 (ENSSLDG00000004836)	aanat1 (ENSSLDG00000004930)	UBE2O (ENSSLDG00000004966)
Barramundi perch	MODERN SPECIES	113														ENSLCAG00010020033	DDX5 (ENSLCAG00010020056)	POLG2 (ENSLCAG00010020074) ##22	srp68 (ENSLCAG00010020091)	evpla (ENSLCAG00010020114)	ten1 (ENSLCAG00010020117)	acox1 (ENSLCAG00010020186)	RHBDF2 (ENSLCAG00010020546)	aanat1 (ENSLCAG00010020550)	UBE2O (ENSLCAG00010020576)	SPHK1 (ENSLCAG00010020657)	cygb2 (ENSLCAG00010020659)	ENSLCAG00010020889	ubn2a (ENSLCAG00010021412)	ttc26 (ENSLCAG00010021423)	ENSLCAG00010021430	slc25a38b (ENSLCAG00010021433)	myh9a (ENSLCAG00010021928)
Pleuronectoidei	ANCESTRAL SPECIES	21												ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT00940000180132	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00550000075117.m.a	ENSGT00940000155632.p	ENSGT00940000158914
Turbot	MODERN SPECIES	20	cacng5a (ENSSMAG00000018286)	PRKCA (ENSSMAG00000018270)	APOH (ENSSMAG00000018259)	APOH (ENSSMAG00000018248)	NOL11 (ENSSMAG00000018239)	ENSSMAG00000018193	ENSSMAG00000031026	ENSSMAG00000018086	ENSSMAG00000018058	CEP95 (ENSSMAG00000018019)	ENSSMAG00000026809	ENSSMAG00000017992	ENSSMAG00000034913	ENSSMAG00000017987	ENSSMAG00000017903	POLG2 (ENSSMAG00000017857) ##22	srp68 (ENSSMAG00000017805)	evpla (ENSSMAG00000017734)	ten1 (ENSSMAG00000037178)	acox1 (ENSSMAG00000017686)	RHBDF2 (ENSSMAG00000017610)	aanat1 (ENSSMAG00000017595)	UBE2O (ENSSMAG00000017525)	SPHK1 (ENSSMAG00000017451)	ENSSMAG00000017438	ENSSMAG00000017365	ubn2a (ENSSMAG00000017283)	ttc26 (ENSSMAG00000017140)	slc25a38b (ENSSMAG00000017125)	myh9a (ENSSMAG00000017004)	map2k7 (ENSSMAG00000016943)
Tongue sole	MODERN SPECIES	19	si:ch211-243a20.3 (ENSCSEG00000006712)	f8a (ENSCSEG00000006715)	emp1 (ENSCSEG00000006734)	ENSCSEG00000006740	rbfox2 (ENSCSEG00000007748)	pde6ha (ENSCSEG00000007759)	pde6ha (ENSCSEG00000007767)	ENSCSEG00000007775	ENSCSEG00000007789	slc34a2a (ENSCSEG00000007814)	ENSCSEG00000007958	ENSCSEG00000007963	ENSCSEG00000007975	chic2 (ENSCSEG00000007980)	DDX5 (ENSCSEG00000007987)	POLG2 (ENSCSEG00000008112) ##22	srp68 (ENSCSEG00000008135)	evpla (ENSCSEG00000008174)	ten1 (ENSCSEG00000008197)	acox1 (ENSCSEG00000008205)	RHBDF2 (ENSCSEG00000008251)	aanat1 (ENSCSEG00000008294)	UBE2O (ENSCSEG00000008301)	SPHK1 (ENSCSEG00000008348)	cygb2 (ENSCSEG00000008356)	ENSCSEG00000008381	slc25a38b (ENSCSEG00000008670)	ttc26 (ENSCSEG00000008692)	ubn2a (ENSCSEG00000008734)	ankrd49 (ENSCSEG00000008786)	GPR83 (ENSCSEG00000008789)
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00940000156104.B	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Tetraodontidae	ANCESTRAL SPECIES	147															ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00550000075117.m.a	ENSGT00390000000159	ENSGT00940000155858.f
Tetraodon	MODERN SPECIES	26	ano10b (ENSTNIG00000007792)	snrkb (ENSTNIG00000007793)	wt1a (ENSTNIG00000007794)	ENSTNIG00000007795	ENSTNIG00000000526	ENSTNIG00000007796	ENSTNIG00000007797	ENDOV (ENSTNIG00000006755)	NPTX1 (ENSTNIG00000000167)	RPTOR (ENSTNIG00000017505)	ENSTNIG00000017506	QPRT (ENSTNIG00000017507)	ppp1r12c (ENSTNIG00000017508)	ENSTNIG00000017509	DDX5 (ENSTNIG00000017510)	POLG2 (ENSTNIG00000017511) ##22	srp68 (ENSTNIG00000017512)	evpla (ENSTNIG00000017513)	acox1 (ENSTNIG00000017514)	acox1 (ENSTNIG00000000932)	RHBDF2 (ENSTNIG00000017515)	aanat1 (ENSTNIG00000017516)	UBE2O (ENSTNIG00000017517)	SPHK1 (ENSTNIG00000017518)	cygb2 (ENSTNIG00000017519)	ENSTNIG00000017520	ENSTNIG00000000723	ubn2a (ENSTNIG00000017521)	ttc26 (ENSTNIG00000017522)	slc25a38b (ENSTNIG00000017523)	ENSTNIG00000017524
Fugu	MODERN SPECIES	8	CBX4 (ENSTRUG00000001874)	ENSTRUG00000032147	dgke (ENSTRUG00000002270)	trim25 (ENSTRUG00000002882)	ENSTRUG00000003563	SEC14L1 (ENSTRUG00000003962)	ENDOV (ENSTRUG00000004474)	NPTX1 (ENSTRUG00000004582)	ENSTRUG00000027739	ENSTRUG00000032868	ppp1r12c (ENSTRUG00000001629)	QPRT (ENSTRUG00000001650)	ENSTRUG00000028957	ENSTRUG00000032773	DDX5 (ENSTRUG00000002356)	ENSTRUG00000025514 ##22	ENSTRUG00000027199	srp68 (ENSTRUG00000002749)	ten1 (ENSTRUG00000021534)	acox1 (ENSTRUG00000033106)	RHBDF2 (ENSTRUG00000002805)	aanat1 (ENSTRUG00000017502)	UBE2O (ENSTRUG00000026213)	ttc26 (ENSTRUG00000031838)	ENSTRUG00000027021	ENSTRUG00000032014	ldb1b (ENSTRUG00000027693)	armh3 (ENSTRUG00000000380)	ldb1b (ENSTRUG00000026189)	ENSTRUG00000025109	slc25a38b (ENSTRUG00000007084)
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT01050000244893.c.b.b.a	ENSGT01050000244961.a.a.a	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT00940000156104.B	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.r	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	745														ENSLBEG00000010824	DDX5 (ENSLBEG00000010767)	POLG2 (ENSLBEG00000010722) ##22	srp68 (ENSLBEG00000010644)	ENSLBEG00000010610	evpla (ENSLBEG00000010435)	ten1 (ENSLBEG00000010363)	acox1 (ENSLBEG00000010262)	RHBDF2 (ENSLBEG00000010169)	aanat1 (ENSLBEG00000010137)
Ballan wrasse	MODERN SPECIES	1664																POLG2 (ENSLBEG00000012319) ##22	srp68 (ENSLBEG00000012258)
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT00940000170606.f	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.q.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.f	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.r	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Perciformes	ANCESTRAL SPECIES	2	ENSGT01050000244961.a.a.a	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT00940000156104.B	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT00940000170606.f	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.r	ENSGT01020000230338.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Perciformes_a	ANCESTRAL SPECIES		ENSGT01050000244893.c.b.b.a	ENSGT01050000244961.a.a.a	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT00940000156104.B	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT00940000170606.f	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.r	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Pike perch	MODERN SPECIES	8	ENSSLUG00000010349	ENSSLUG00000010353	APOH (ENSSLUG00000010356)	APOH (ENSSLUG00000010360)	nol11 (ENSSLUG00000010366)	BPTF (ENSSLUG00000010494)	C17orf58 (ENSSLUG00000012588)	ENSSLUG00000012591	SMURF2 (ENSSLUG00000012643)	ENSSLUG00000014046	CEP95 (ENSSLUG00000014055)	ENSSLUG00000014076	ENSSLUG00000014082	ENSSLUG00000014088	DDX5 (ENSSLUG00000014125)	POLG2 (ENSSLUG00000014799) ##22	srp68 (ENSSLUG00000014830)	evpla (ENSSLUG00000005064)	ten1 (ENSSLUG00000005185)	acox1 (ENSSLUG00000005282)	RHBDF2 (ENSSLUG00000005795)	aanat1 (ENSSLUG00000005842)	ENSSLUG00000005863	SPHK1 (ENSSLUG00000005905)	cygb2 (ENSSLUG00000005934)	ENSSLUG00000006398	ubn2a (ENSSLUG00000015804)	ttc26 (ENSSLUG00000015838)	slc25a38b (ENSSLUG00000016213)	myh9a (ENSSLUG00000016811)	map2k7 (ENSSLUG00000024875)
Channel bull blenny	MODERN SPECIES		APOH (ENSCGOG00000024332)	APOH (ENSCGOG00000024330)	nol11 (ENSCGOG00000024325)	BPTF (ENSCGOG00000024271)	ENSCGOG00000024223	ENSCGOG00000024203	SMURF2 (ENSCGOG00000024101)	ENSCGOG00000024075	ENSCGOG00000024073	ENSCGOG00000024072	ENSCGOG00000024070	ENSCGOG00000024069	ENSCGOG00000024068	ENSCGOG00000024067	DDX5 (ENSCGOG00000023657)	POLG2 (ENSCGOG00000023572) ##22	srp68 (ENSCGOG00000023500)	evpla (ENSCGOG00000023476)	ten1 (ENSCGOG00000023468)	acox1 (ENSCGOG00000023144)	RHBDF2 (ENSCGOG00000023083)	aanat1 (ENSCGOG00000023071)	UBE2O (ENSCGOG00000023041)	ENSCGOG00000023034	cygb2 (ENSCGOG00000023032)	ENSCGOG00000015594	ubn2a (ENSCGOG00000015282)	ttc26 (ENSCGOG00000015026)	ENSCGOG00000015017	slc25a38b (ENSCGOG00000015008)	myh9a (ENSCGOG00000009004)
Cottioidei	ANCESTRAL SPECIES	3	ENSGT00390000007786.a.a	ENSGT01050000244893.c.b.b.a	ENSGT01050000244961.a.a.a	ENSGT00940000156104.B	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.r	ENSGT01020000230338.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Lumpfish	MODERN SPECIES		cacng5a (ENSCLMG00005023127)	PRKCA (ENSCLMG00005023122)	APOH (ENSCLMG00005023109)	APOH (ENSCLMG00005023106)	nol11 (ENSCLMG00005023102)	BPTF (ENSCLMG00005023092)	C17orf58 (ENSCLMG00005023069)	ENSCLMG00005023066	SMURF2 (ENSCLMG00005023061)	CEP95 (ENSCLMG00005023048)	ENSCLMG00005023046	ENSCLMG00005023044	ENSCLMG00005023043	ENSCLMG00005023041	DDX5 (ENSCLMG00005023023)	POLG2 (ENSCLMG00005023014) ##22	srp68 (ENSCLMG00005023011)	evpla (ENSCLMG00005023002)	ten1 (ENSCLMG00005022998)	acox1 (ENSCLMG00005022970)	RHBDF2 (ENSCLMG00005022947)	aanat1 (ENSCLMG00005022944)	UBE2O (ENSCLMG00005022937)	SPHK1 (ENSCLMG00005022934)	cygb2 (ENSCLMG00005022933)	ENSCLMG00005022929	ubn2a (ENSCLMG00005022922)	ttc26 (ENSCLMG00005022915)	ENSCLMG00005022912	slc25a38b (ENSCLMG00005022910)	myh9a (ENSCLMG00005016021)
Eupecaria_C	ANCESTRAL SPECIES	14	ENSGT00940000165172.b	ENSGT00940000154912.u.a	ENSGT00940000153846.a.b	ENSGT00940000156166.b.a.b	ENSGT00390000017614.e.a.e.a	ENSGT00390000017614.e.a.e.b	ENSGT00940000158718.a.a	ENSGT00390000000976.d.a	ENSGT00950000183036.b.e	ENSGT01030000234900	ENSGT00390000009916	ENSGT00940000154990.fb.a	ENSGT00940000158914	ENSGT00940000155632.p	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b	ENSGT00550000075117.m.a	ENSGT01100000263559.A
Gilthead seabream	MODERN SPECIES		si:ch211-214c7.5 (ENSSAUG00010013495)	PKN1 (ENSSAUG00010013567)	map2k7 (ENSSAUG00010021200)	myh9a (ENSSAUG00010021322)	ENSSAUG00010024995	ENSSAUG00010024997	ENSSAUG00010025000	ENSSAUG00010025001	ENSSAUG00010025003	ENSSAUG00010025006	ENSSAUG00010025008	ENSSAUG00010025010	ENSSAUG00010025012	ENSSAUG00010025015	DDX5 (ENSSAUG00010025034)	POLG2 (ENSSAUG00010025348) ##22	srp68 (ENSSAUG00010025350)	evpla (ENSSAUG00010025365)	ten1 (ENSSAUG00010025369)	acox1 (ENSSAUG00010025374)	RHBDF2 (ENSSAUG00010025437)	AANAT1 (ENSSAUG00010000106)	UBE2O (ENSSAUG00010000140)	SPHK1 (ENSSAUG00010000223)	ENSSAUG00010000231	cygb2 (ENSSAUG00010000233)	ENSSAUG00010000365	ubn2a (ENSSAUG00010000802)	ttc26 (ENSSAUG00010000890)	ENSSAUG00010000918	slc25a38b (ENSSAUG00010000921)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	13	ENSGT00940000154912.u.a	ENSGT00940000153846.a.b	ENSGT00940000156166.b.a.b	ENSGT00390000017614.e.a.e.a	ENSGT00390000017614.e.a.e.b	ENSGT00940000158718.a.a	ENSGT00390000000976.d.a	ENSGT00950000183036.b.e	ENSGT01030000234900	ENSGT00390000009916	ENSGT00940000154990.fb.a	ENSGT00940000158914	ENSGT00940000155632.p	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00550000075117.m.a
Large yellow croaker	MODERN SPECIES	481	ENSLCRG00005009041	ENSLCRG00005009040	ENSLCRG00005009039	ENSLCRG00005009038	ENSLCRG00005009034	ENSLCRG00005009033	ENSLCRG00005009032	ENSLCRG00005009031	ENSLCRG00005009029	ENSLCRG00005009028	ENSLCRG00005009023	ENSLCRG00005009020	ENSLCRG00005009018	ENSLCRG00005009016	DDX5 (ENSLCRG00005008160)	POLG2 (ENSLCRG00005008140) ##22	srp68 (ENSLCRG00005007813)	evpla (ENSLCRG00005007792)	ten1 (ENSLCRG00005007788)	acox1 (ENSLCRG00005004566)	RHBDF2 (ENSLCRG00005003314)	aanat1 (ENSLCRG00005003294)	UBE2O (ENSLCRG00005002453)	SPHK1 (ENSLCRG00005002415)	cygb2 (ENSLCRG00005002407)	ENSLCRG00005019048	ubn2a (ENSLCRG00005019003)	ttc26 (ENSLCRG00005018878)	ENSLCRG00005018872	SLC25A38 (ENSLCRG00005018870)	ENSLCRG00005018868
European seabass	MODERN SPECIES	20	ENSDLAG00005033228	ENSDLAG00005030474	ENSDLAG00005003701	ENSDLAG00005008327	ENSDLAG00005026635	ENSDLAG00005029157	ENSDLAG00005033675	ENSDLAG00005028741	ENSDLAG00005006818	ENSDLAG00005029616	ENSDLAG00005033819	ENSDLAG00005027654	ENSDLAG00005034704	ENSDLAG00005020626	ENSDLAG00005020639	ENSDLAG00005021120 ##22	srp68 (ENSDLAG00005021131)	evpla (ENSDLAG00005021372)	ten1 (ENSDLAG00005034984)	acox1 (ENSDLAG00005021462)	RHBDF2 (ENSDLAG00005021517)	aanat1 (ENSDLAG00005021664)	UBE2O (ENSDLAG00005021672)	SPHK1 (ENSDLAG00005021739)	ENSDLAG00005029401	ENSDLAG00005021846	ENSDLAG00005022388	ENSDLAG00005022420	ENSDLAG00005022475	ENSDLAG00005022481	ENSDLAG00005030440
Ovalentaria	ANCESTRAL SPECIES		ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT00940000156104.B	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT01030000235173	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00940000163460.b	ENSGT00550000075117.m.a
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT00940000156104.B	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT01030000235173	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Pomacentridae	ANCESTRAL SPECIES	8	ENSGT00940000156104.B	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00940000164451	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT01030000235173	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Pomacentridae_A	ANCESTRAL SPECIES																ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C.d	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Amphiprion	ANCESTRAL SPECIES		ENSGT00940000164451	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT01030000235173	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a.a	ENSGT00940000155244.c.c.a.a.b.b.b.a	ENSGT00940000155244.c.c.a.a.b.b.b.b	ENSGT00940000180132	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C.d	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Orange clownfish	MODERN SPECIES	17	ENSAPEG00000003417	ENSAPEG00000003379	SMURF2 (ENSAPEG00000003278)	ENSAPEG00000003253	ENSAPEG00000003230	CEP95 (ENSAPEG00000003201)	ENSAPEG00000003181	ENSAPEG00000003148	ENSAPEG00000003129	ENSAPEG00000003114	ENSAPEG00000003106	ENSAPEG00000002970	ENSAPEG00000002947	ENSAPEG00000002927	DDX5 (ENSAPEG00000002878)	POLG2 (ENSAPEG00000002866) ##22	srp68 (ENSAPEG00000002805)	evpla (ENSAPEG00000002618)	ten1 (ENSAPEG00000002593)	acox1 (ENSAPEG00000002575)	RHBDF2 (ENSAPEG00000002505)	aanat1 (ENSAPEG00000002471)	UBE2O (ENSAPEG00000002412)	SPHK1 (ENSAPEG00000002404)	cygb2 (ENSAPEG00000002373)	ENSAPEG00000002229	ubn2a (ENSAPEG00000002111)	ttc26 (ENSAPEG00000002024)	ENSAPEG00000002000	slc25a38b (ENSAPEG00000001980)	myh9a (ENSAPEG00000001864)
Clown anemonefish	MODERN SPECIES	3592	ENSAOCG00000007667	ENSAOCG00000007676	ENSAOCG00000008098	ENSAOCG00000000554	ENSAOCG00000002306	ENSAOCG00000009213	ENSAOCG00000002166	mrpl17 (ENSAOCG00000009243)	TMEM145 (ENSAOCG00000009268)	ENSAOCG00000009297	ENSAOCG00000000621	cd79a (ENSAOCG00000010188)	arhgef1b (ENSAOCG00000010266)	ENSAOCG00000010291	DDX5 (ENSAOCG00000010337)	POLG2 (ENSAOCG00000010349) ##22	srp68 (ENSAOCG00000010414)	evpla (ENSAOCG00000010449)	ten1 (ENSAOCG00000010463)	acox1 (ENSAOCG00000010509)	RHBDF2 (ENSAOCG00000010539)	aanat1 (ENSAOCG00000010555)	UBE2O (ENSAOCG00000010629)	SPHK1 (ENSAOCG00000010644)	CYGB (ENSAOCG00000010705)	ENSAOCG00000010831	ubn2a (ENSAOCG00000010890)	ttc26 (ENSAOCG00000010966)	slc25a38b (ENSAOCG00000010982)	myh9a (ENSAOCG00000011071)	map2k7 (ENSAOCG00000011142)
Spiny chromis	MODERN SPECIES	1253														ENSAPOG00000018242	DDX5 (ENSAPOG00000018223)	POLG2 (ENSAPOG00000018161) ##22	srp68 (ENSAPOG00000018152)	evpla (ENSAPOG00000018142)	ten1 (ENSAPOG00000018039)	acox1 (ENSAPOG00000018031)	RHBDF2 (ENSAPOG00000018017)	aanat1 (ENSAPOG00000017940)	camk2b1 (ENSAPOG00000017920)
Bicolor damselfish	MODERN SPECIES	998							MICU3 (ENSSPAG00000015130)	fgf20a (ENSSPAG00000015115)	kpna7 (ENSSPAG00000015093)	ENSSPAG00000015084	xpa (ENSSPAG00000015066)	SLC24A2 (ENSSPAG00000015044)	ENSSPAG00000015017	ENSSPAG00000015008	DDX5 (ENSSPAG00000014946)	POLG2 (ENSSPAG00000014932) ##22	srp68 (ENSSPAG00000014908)	evpla (ENSSPAG00000014818)	ten1 (ENSSPAG00000014711)	acox1 (ENSSPAG00000014432)	RHBDF2 (ENSSPAG00000014342)	aanat1 (ENSSPAG00000014325)	UBE2O (ENSSPAG00000014275)
Cichlidae	ANCESTRAL SPECIES	3	ENSGT01050000244961.a.a.a	ENSGT00940000156104.B	ENSGT00940000157228.i.b	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b.x	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.m	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.b	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b.x	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	5	ENSGT00940000157228.i.a	ENSGT00390000009760	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.m	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.b	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.b	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b.x	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Haplochromini	ANCESTRAL SPECIES	3	ENSGT01050000244891.E.a.a	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.m	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.b	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.a.a.b	ENSGT00970000193973	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.a.a.a.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b.x	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Burton s mouthbrooder	MODERN SPECIES	440														ENSHBUG00000002820	DDX5 (ENSHBUG00000002856)	POLG2 (ENSHBUG00000002868) ##22	srp68 (ENSHBUG00000002943)	evpla (ENSHBUG00000002957)	ten1 (ENSHBUG00000002964)	ENSHBUG00000002976	acox1 (ENSHBUG00000003000)	RHBDF2 (ENSHBUG00000003024)	aanat1 (ENSHBUG00000003032)	UBE2O (ENSHBUG00000003061)	SPHK1 (ENSHBUG00000003072)	cygb2 (ENSHBUG00000003087)	ENSHBUG00000003172	ubn2a (ENSHBUG00000003249)	ttc26 (ENSHBUG00000003321)	slc25a38b (ENSHBUG00000003348)	myh9a (ENSHBUG00000003422)
Haplochromini_A	ANCESTRAL SPECIES	2	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.m	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.b	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.a.a.b	ENSGT00970000193973.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.a.a.a.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b.x	ENSGT00550000075117.m.a	ENSGT00940000155632.p
Haplochromini_B	ANCESTRAL SPECIES	8	ENSGT00940000155563.k.b.b	ENSGT00390000005412	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.m	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.b	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.a.a.b	ENSGT00970000193973.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.a.a.a.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00550000075117.m.a	ENSGT00940000155632.p	ENSGT00940000158914
Eastern happy	MODERN SPECIES	18	SMURF2 (ENSACLG00000002616)	CEP95 (ENSACLG00000002766)	ENSACLG00000002793	ENSACLG00000002807	ENSACLG00000002838	ENSACLG00000002925	ENSACLG00000002942	ENSACLG00000002948	ENSACLG00000002976	ENSACLG00000003004	ENSACLG00000003018	ENSACLG00000003031	ENSACLG00000003065	ENSACLG00000003073	DDX5 (ENSACLG00000003098)	POLG2 (ENSACLG00000003123) ##22	srp68 (ENSACLG00000003127)	evpla (ENSACLG00000003221)	ten1 (ENSACLG00000003230)	acox1 (ENSACLG00000003234)	RHBDF2 (ENSACLG00000003319)	aanat1 (ENSACLG00000003454)	UBE2O (ENSACLG00000003484)	SPHK1 (ENSACLG00000003583)	cygb2 (ENSACLG00000003941)	ENSACLG00000003952	ubn2a (ENSACLG00000004028)	ttc26 (ENSACLG00000004122)	slc25a38b (ENSACLG00000004171)	myh9a (ENSACLG00000004210)	map2k7 (ENSACLG00000004319)
Zebra mbuna	MODERN SPECIES	1109	SMURF2 (ENSMZEG00005001617)	CEP95 (ENSMZEG00005001597)	ENSMZEG00005001549	ENSMZEG00005001533	ENSMZEG00005001513	ENSMZEG00005001492	ENSMZEG00005001405	ENSMZEG00005001388	ENSMZEG00005001361	ENSMZEG00005001324	ENSMZEG00005001307	ENSMZEG00005001303	ENSMZEG00005001287	ENSMZEG00005001275	DDX5 (ENSMZEG00005001247)	POLG2 (ENSMZEG00005001234) ##22	srp68 (ENSMZEG00005001197)	evpla (ENSMZEG00005001178)	ten1 (ENSMZEG00005001170)	acox1 (ENSMZEG00005001118)	RHBDF2 (ENSMZEG00005001062)	aanat1 (ENSMZEG00005001038)	UBE2O (ENSMZEG00005001025)	SPHK1 (ENSMZEG00005001010)	cygb2 (ENSMZEG00005000988)	ENSMZEG00005000820	ubn2a (ENSMZEG00005000718)	ttc26 (ENSMZEG00005000603)	slc25a38b (ENSMZEG00005000578)	myh9a (ENSMZEG00005000404)	map2k7 (ENSMZEG00005000337)
P. nyererei	MODERN SPECIES	363	ENSPNYG00000017925	SMURF2 (ENSPNYG00000017869)	CEP95 (ENSPNYG00000017842)	ENSPNYG00000017816	ENSPNYG00000017800	ENSPNYG00000017781	ENSPNYG00000017759	ENSPNYG00000017681	ENSPNYG00000017637	ENSPNYG00000017628	ENSPNYG00000017613	ENSPNYG00000017599	ENSPNYG00000017585	ENSPNYG00000017544	DDX5 (ENSPNYG00000017510)	POLG2 (ENSPNYG00000017495) ##22	srp68 (ENSPNYG00000017452)	evpla (ENSPNYG00000017423)	ten1 (ENSPNYG00000017408)	acox1 (ENSPNYG00000017364)	RHBDF2 (ENSPNYG00000017327)	aanat1 (ENSPNYG00000017306)	UBE2O (ENSPNYG00000017257)	SPHK1 (ENSPNYG00000017177)	cygb2 (ENSPNYG00000017139)	ENSPNYG00000017010	ubn2a (ENSPNYG00000016949)	ttc26 (ENSPNYG00000016899)	ENSPNYG00000016880	slc25a38b (ENSPNYG00000016863)	myh9a (ENSPNYG00000016788)
Lyretail cichlid	MODERN SPECIES	301	BPTF (ENSNBRG00000003599)	ENSNBRG00000003577	ENSNBRG00000003538	SMURF2 (ENSNBRG00000003481)	CEP95 (ENSNBRG00000003428)	ENSNBRG00000003400	ENSNBRG00000003287	ENSNBRG00000003252	ENSNBRG00000003222	ENSNBRG00000003185	ENSNBRG00000003151	ENSNBRG00000003128	ENSNBRG00000003091	ENSNBRG00000003070	DDX5 (ENSNBRG00000002979)	POLG2 (ENSNBRG00000002880) ##22	srp68 (ENSNBRG00000002831)	evpla (ENSNBRG00000002781)	ten1 (ENSNBRG00000002768)	acox1 (ENSNBRG00000002725)	RHBDF2 (ENSNBRG00000002627)	aanat1 (ENSNBRG00000002600)	UBE2O (ENSNBRG00000002538)	SPHK1 (ENSNBRG00000002489)	cygb2 (ENSNBRG00000002464)	ENSNBRG00000002329	ubn2a (ENSNBRG00000002266)	ttc26 (ENSNBRG00000002205)	slc25a38b (ENSNBRG00000002172)	myh9a (ENSNBRG00000002041)	map2k7 (ENSNBRG00000001980)
Nile tilapia	MODERN SPECIES	18	ENSONIG00000038211	ENSONIG00000032445	ENSONIG00000039759	ENSONIG00000033788	ENSONIG00000042811	ENSONIG00000036831	ENSONIG00000039778	ENSONIG00000038080	ENSONIG00000037762	ENSONIG00000018276	ENSONIG00000018277	ENSONIG00000032318	ENSONIG00000007331	ENSONIG00000032678	DDX5 (ENSONIG00000018269)	POLG2 (ENSONIG00000028157) ##22	srp68 (ENSONIG00000018268)	evpla (ENSONIG00000018265)	ten1 (ENSONIG00000027992)	acox1 (ENSONIG00000018262)	RHBDF2 (ENSONIG00000018255)	aanat1 (ENSONIG00000018253)	UBE2O (ENSONIG00000018252)	SPHK1 (ENSONIG00000018251)	cygb2 (ENSONIG00000018250)	ENSONIG00000018235	ubn2a (ENSONIG00000018234)	ttc26 (ENSONIG00000018230)	ENSONIG00000021231	slc25a38b (ENSONIG00000035962)	myh9a (ENSONIG00000018217)
Midas cichlid	MODERN SPECIES	1179															DDX5 (ENSACIG00000006502)	POLG2 (ENSACIG00000006899) ##22	srp68 (ENSACIG00000006966)	evpla (ENSACIG00000007022)	ten1 (ENSACIG00000007172)	ENSACIG00000007202	acox1 (ENSACIG00000007216)	RHBDF2 (ENSACIG00000007245)	aanat1 (ENSACIG00000007287)	UBE2O (ENSACIG00000007302)	SPHK1 (ENSACIG00000007340)	cygb2 (ENSACIG00000007374)	ENSACIG00000007390	ubn2a (ENSACIG00000007485)	ttc26 (ENSACIG00000007564)	slc25a38b (ENSACIG00000007595)	myh9a (ENSACIG00000007669)
Atherinomorphae	ANCESTRAL SPECIES	20											ENSGT01100000263569.a.b.a.b.a.a.a.b.a.b	ENSGT01100000263504.a.b.b.b.b.y	ENSGT00950000183089.c.a.k.a	ENSGT00990000203553.c.a.a.a.a.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00940000163460.b	ENSGT00550000075117.m.a
Cyprinodontiformes	ANCESTRAL SPECIES	18	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT00940000167432	ENSGT00530000063410.a.q.b	ENSGT00940000153464.B.z.a	ENSGT00390000000583	ENSGT00950000183050.b.b.b.a.a.a.b	ENSGT00950000182898.a.a.a.a.a.h	ENSGT00940000155337.`b	ENSGT00940000154987.i.b.a.b	ENSGT00500000045018	ENSGT00940000162755	ENSGT00940000165311.b	ENSGT00550000074953	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000157864.b	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT00940000163460.b
Aplocheiloidei	ANCESTRAL SPECIES	32	ENSGT01100000263601	ENSGT01100000263891	ENSGT00940000167432	ENSGT00530000063410.a.q.b	ENSGT00940000153464.B.z.a	ENSGT00390000000583	ENSGT00950000183050.b.b.b.a.a.a.b	ENSGT00950000182898.a.a.a.a.a.h	ENSGT00940000155337.`b	ENSGT00940000154987.i.b.a.b	ENSGT00500000045018	ENSGT00940000162755	ENSGT00940000165311.b	ENSGT00550000074953	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000157864.b	ENSGT00940000155004.s	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b	ENSGT00550000075117.m.a	ENSGT00940000155632.p.h
Mangrove rivulus	MODERN SPECIES	378															DDX5 (ENSKMAG00000011257)	POLG2 (ENSKMAG00000011330) ##22	ENSKMAG00000011348	srp68 (ENSKMAG00000011365)	evpla (ENSKMAG00000011455)	ten1 (ENSKMAG00000011522)	acox1 (ENSKMAG00000011566)	RHBDF2 (ENSKMAG00000011630)	aanat1 (ENSKMAG00000011695)	UBE2O (ENSKMAG00000011741)	SPHK1 (ENSKMAG00000011808)
Turquoise killifish	MODERN SPECIES	1617	ENSNFUG00015023583	ENSNFUG00015023575	otx2a (ENSNFUG00015023572)	MDH1 (ENSNFUG00015023534)	ugp2a (ENSNFUG00015023325)	vps54 (ENSNFUG00015023231)	PELI1A (ENSNFUG00015023219)	slc29a2 (ENSNFUG00015023212)	LGALSLA (ENSNFUG00015023207)	TMEM246 (ENSNFUG00015023205)	TPC3 (ENSNFUG00015023162)	TTBK1 (ENSNFUG00015023144)	ENSNFUG00015023110	Nfu_g_1_013649 (ENSNFUG00015023104)	DDX5 (ENSNFUG00015022815)	LRRC8E (ENSNFUG00015022783) ##22	ENSNFUG00015022782	Cdkn2d (ENSNFUG00015022781)	ap1m2 (ENSNFUG00015022583)	ENSNFUG00015020613	SMARCA4 (ENSNFUG00015020530)	atg4da (ENSNFUG00015020523)	MAST1 (ENSNFUG00015019007)	RNASEH2A (ENSNFUG00015018947)	SOX10 (ENSNFUG00015018941)	ENSNFUG00015018937	ENSNFUG00015018933	ENSNFUG00015018928	C3H22ORF32 (ENSNFUG00015018926)	zgc:158803 (ENSNFUG00015018917)	PANE1 (ENSNFUG00015018910)
Cyprinodontoidei	ANCESTRAL SPECIES	41	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT00940000167432	ENSGT00530000063410.a.q.b	ENSGT00940000153464.B.z.a	ENSGT00390000000583	ENSGT00950000183050.b.b.b.a.a.a.b	ENSGT00950000182898.a.a.a.a.a.h	ENSGT00940000155337.`b	ENSGT00940000154987.i.b.a.b	ENSGT00500000045018	ENSGT00940000162755	ENSGT00940000165311.b	ENSGT00550000074953	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f.d.a	ENSGT00940000153578.A.f.d.b	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00950000183036.b.e	ENSGT01030000234900	ENSGT00390000009916	ENSGT00940000154990.fb.a.e	ENSGT00940000158914	ENSGT00940000155632.p	ENSGT00550000075117.m.a	ENSGT00990000203740.C	ENSGT00390000000159	ENSGT00940000155858.f	ENSGT00940000155159.C.nb	ENSGT00940000155004.s	ENSGT00940000161510.v.a	ENSGT00950000183089.c.a.k.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f.d.a	ENSGT00940000153578.A.f.c	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00550000074953	ENSGT00940000165311.b	ENSGT00940000162755	ENSGT00500000045018	ENSGT00940000154987.i.b.a.b	ENSGT00940000155337.`b
Poecilia	ANCESTRAL SPECIES	6	ENSGT00950000183036.b.e	ENSGT01030000234900	ENSGT00390000009916	ENSGT00940000154990.fb.a.e	ENSGT00940000158914	ENSGT00940000155632.p	ENSGT00550000075117.m.a	ENSGT00990000203740.C	ENSGT00390000000159	ENSGT00940000155858.f	ENSGT00940000155159.C.nb	ENSGT00940000155004.s	ENSGT00940000161510.v.a	ENSGT00950000183089.c.a.k.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f.d.a	ENSGT00940000153578.A.f.d.b	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00550000074953	ENSGT00940000165311.b	ENSGT00940000162755	ENSGT00500000045018	ENSGT00940000154987.i.b.a.b	ENSGT00940000155337.`b
NAME_6	ANCESTRAL SPECIES	188	ENSGT00940000154382.a.a	ENSGT00390000009916	ENSGT00940000154990.fb.a.e	ENSGT00940000158914	ENSGT00940000155632.p	ENSGT00550000075117.m.a	ENSGT00940000163460.b	ENSGT00390000000159	ENSGT00940000155858.f	ENSGT00940000155159.C.nb	ENSGT00940000155004.s	ENSGT00940000161510.v.a	ENSGT00950000183089.c.a.k.a.lb	ENSGT01100000263569.a.b.a.b.a.b.b.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f.d.a	ENSGT00940000153578.A.f.c	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00950000183089.c.a.k.a.mb	ENSGT00550000074953	ENSGT00940000165311.b	ENSGT00940000162755
Amazon molly	MODERN SPECIES	592		PKN1 (ENSPFOG00000007189)	map2k7 (ENSPFOG00000007475)	myh9a (ENSPFOG00000007538)	slc25a38b (ENSPFOG00000009572)	ENSPFOG00000020273	ttc26 (ENSPFOG00000009590)	ubn2a (ENSPFOG00000009791)	ENSPFOG00000009929	cygb2 (ENSPFOG00000011582)	ENSPFOG00000011600	ENSPFOG00000011672	ENSPFOG00000011682	ENSPFOG00000020274	DDX5 (ENSPFOG00000011690)	POLG2 (ENSPFOG00000011791) ##22	srp68 (ENSPFOG00000011818)	evpla (ENSPFOG00000011941)	evpla (ENSPFOG00000022392)	ten1 (ENSPFOG00000012332)	acox1 (ENSPFOG00000012337)	RHBDF2 (ENSPFOG00000012500)	aanat1 (ENSPFOG00000012646)	UBE2O (ENSPFOG00000012669)	SPHK1 (ENSPFOG00000012882)	ENSPFOG00000020275	ENSPFOG00000020276	ENSPFOG00000012916	ENSPFOG00000012971
Sailfin molly	MODERN SPECIES	25	si:ch211-214c7.5 (ENSPLAG00000014032)	PKN1 (ENSPLAG00000014020)	map2k7 (ENSPLAG00000013949)	myh9a (ENSPLAG00000013889)	slc25a38b (ENSPLAG00000013811)	ENSPLAG00000013807	ttc26 (ENSPLAG00000013790)	ubn2a (ENSPLAG00000013733)	ENSPLAG00000013619	cygb2 (ENSPLAG00000013354)	ALOXE3 (ENSPLAG00000013330)	ENSPLAG00000013200	ENSPLAG00000013146	ENSPLAG00000013131	DDX5 (ENSPLAG00000013054)	POLG2 (ENSPLAG00000013015) ##22	srp68 (ENSPLAG00000013008)	evpla (ENSPLAG00000012927)	evpla (ENSPLAG00000012622)	ten1 (ENSPLAG00000012598)	acox1 (ENSPLAG00000012560)	RHBDF2 (ENSPLAG00000012509)	aanat1 (ENSPLAG00000012462)	UBE2O (ENSPLAG00000012438)	SPHK1 (ENSPLAG00000012360)	ENSPLAG00000012348	ENSPLAG00000012270	ENSPLAG00000012258	ENSPLAG00000012247	tpcn3 (ENSPLAG00000012207)
Guppy	MODERN SPECIES	439	ENSPREG00000018186	ENSPREG00000018194	si:ch211-214c7.5 (ENSPREG00000018202)	PKN1 (ENSPREG00000018220)	map2k7 (ENSPREG00000018248)	myh9a (ENSPREG00000018284)	slc25a38b (ENSPREG00000018406)	ENSPREG00000018476	ttc26 (ENSPREG00000018493)	ubn2a (ENSPREG00000018545)	ENSPREG00000018632	ALOX15B (ENSPREG00000018721)	ENSPREG00000018820	ENSPREG00000018873	DDX5 (ENSPREG00000018914)	POLG2 (ENSPREG00000018945) ##22	srp68 (ENSPREG00000019003)	evpla (ENSPREG00000019095)	evpla (ENSPREG00000019352)	ten1 (ENSPREG00000019514)	acox1 (ENSPREG00000019573)	RHBDF2 (ENSPREG00000019887)	aanat1 (ENSPREG00000019913)	UBE2O (ENSPREG00000019941)	SPHK1 (ENSPREG00000020027)	ENSPREG00000020056	ENSPREG00000020097	ENSPREG00000020234	pgap4 (ENSPREG00000020267)	MAL (ENSPREG00000020274)	lgalsla (ENSPREG00000020286)
Platyfish	MODERN SPECIES	19	ENSXMAG00000021625	si:ch211-214c7.5 (ENSXMAG00000006473)	PKN1 (ENSXMAG00000006429)	map2k7 (ENSXMAG00000006412)	myh9a (ENSXMAG00000006407)	slc25a38b (ENSXMAG00000006405)	ENSXMAG00000022667	ttc26 (ENSXMAG00000006376)	ubn2a (ENSXMAG00000020944)	ENSXMAG00000006162	cygb2 (ENSXMAG00000006158)	ENSXMAG00000015438	ENSXMAG00000015433	ENSXMAG00000024732	DDX5 (ENSXMAG00000006131)	POLG2 (ENSXMAG00000006121) ##22	srp68 (ENSXMAG00000006101)	evpla (ENSXMAG00000006071)	ten1 (ENSXMAG00000006067)	acox1 (ENSXMAG00000006043)	RHBDF2 (ENSXMAG00000006018)	aanat1 (ENSXMAG00000006015)	UBE2O (ENSXMAG00000006001)	ENSXMAG00000029744	SPHK1 (ENSXMAG00000025799)	ENSXMAG00000022696	ENSXMAG00000022896	ENSXMAG00000024755	ENSXMAG00000005984	ENSXMAG00000023118	tpcn3 (ENSXMAG00000013385)
NAME_4	ANCESTRAL SPECIES	74	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT00940000167432	ENSGT00530000063410.a.q.b	ENSGT00940000153464.B.z.a	ENSGT00390000000583	ENSGT00950000183050.b.b.b.a.a.a.b	ENSGT00950000182898.a.a.a.a.a.h	ENSGT00940000155337.`b	ENSGT00940000154987.i.b.a.b	ENSGT00500000045018	ENSGT00940000162755	ENSGT00940000165311.b	ENSGT00550000074953	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f.d.a	ENSGT00940000153578.A.f.d.b	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a
Mummichog	MODERN SPECIES	1243																POLG2 (ENSFHEG00000013523) ##22	srp68 (ENSFHEG00000000313)	evpla (ENSFHEG00000013627)
Sheepshead minnow	MODERN SPECIES	1095															DDX5 (ENSCVAG00000015378)	ENSCVAG00000015342 ##22	srp68 (ENSCVAG00000015277)	evpla (ENSCVAG00000015106)	ten1 (ENSCVAG00000014792)	acox1 (ENSCVAG00000014724)	RHBDF2 (ENSCVAG00000014677)	aanat1 (ENSCVAG00000014671)	ENSCVAG00000014660
Oryzias	ANCESTRAL SPECIES	15	ENSGT00940000155793.a.a	ENSGT00940000154196.b	ENSGT00940000163836.a	ENSGT00950000182772.A.b	ENSGT00940000157560.d.a	ENSGT00940000155710.b	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000154922.a	ENSGT00940000176873	ENSGT01100000264278	ENSGT00940000160148	ENSGT00530000064271	ENSGT00940000153463.b.b	ENSGT00940000155636.b.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00990000203740.C	ENSGT01000000218899	ENSGT00940000163460.b	ENSGT00550000075117.m.a
Oryzias_b	ANCESTRAL SPECIES	34	ENSGT00940000155793.a.a	ENSGT00940000154196.b	ENSGT00940000163836.a	ENSGT00950000182772.A.b	ENSGT00940000157560.d.a	ENSGT00940000155710.b	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000154922.a	ENSGT00940000176873	ENSGT01100000264278	ENSGT00940000160148	ENSGT00530000064271	ENSGT00940000153463.b.b	ENSGT00940000155636.b.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155159.C.nb	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b.s.b
Javanese ricefish	MODERN SPECIES		tp53bp2b (ENSOJAG00000017756)	gtpbp2b (ENSOJAG00000003655)	ENSOJAG00000003702	ENSOJAG00000003721	ENSOJAG00000003778	si:dkey-23a13.20 (ENSOJAG00000003800)	ENSOJAG00000003845	ENSOJAG00000003966	ENSOJAG00000003989	ENSOJAG00000003995	ENSOJAG00000004003	ENSOJAG00000004022	zgc:163040 (ENSOJAG00000004049)	ENSOJAG00000004060	DDX5 (ENSOJAG00000004468)	POLG2 (ENSOJAG00000006845) ##22	ENSOJAG00000007145	evpla (ENSOJAG00000007176)	ten1 (ENSOJAG00000007194)	acox1 (ENSOJAG00000007282)	RHBDF2 (ENSOJAG00000007762)	aanat1 (ENSOJAG00000007800)	UBE2O (ENSOJAG00000007867)	SPHK1 (ENSOJAG00000007904)	cygb2 (ENSOJAG00000007918)	ENSOJAG00000012946	ubn2a (ENSOJAG00000012961)	ttc26 (ENSOJAG00000012980)	ENSOJAG00000013327	ENSOJAG00000013340	ENSOJAG00000013350
Indian medaka	MODERN SPECIES	21	HNRNPLL (ENSOMEG00000008453)	slc22a7a (ENSOMEG00000008469)	ENSOMEG00000000642	ENSOMEG00000000920	JAG1 (ENSOMEG00000008569)	ENSOMEG00000008587	RRP36 (ENSOMEG00000008623)	tp53bp2b (ENSOMEG00000008685)	gtpbp2b (ENSOMEG00000008753)	ENSOMEG00000008808	ENSOMEG00000008851	ENSOMEG00000008855	ENSOMEG00000008861	ENSOMEG00000008873	DDX5 (ENSOMEG00000008956)	POLG2 (ENSOMEG00000009019) ##22	srp68 (ENSOMEG00000009090)	evpla (ENSOMEG00000009127)	ten1 (ENSOMEG00000009189)	acox1 (ENSOMEG00000009248)	RHBDF2 (ENSOMEG00000009348)	aanat1 (ENSOMEG00000009387)	UBE2O (ENSOMEG00000009430)	SPHK1 (ENSOMEG00000009451)	cygb2 (ENSOMEG00000009472)	ENSOMEG00000009514	ENSOMEG00000009752	ubn2a (ENSOMEG00000009877)	ttc26 (ENSOMEG00000009913)	ENSOMEG00000009924	ENSOMEG00000009936
Oryzias_a	ANCESTRAL SPECIES	31	ENSGT00940000155793.a.a	ENSGT00940000154196.b	ENSGT00940000163836.a	ENSGT00950000182772.A.b	ENSGT00940000157560.d.a	ENSGT00940000155710.b	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000154922.a	ENSGT00940000176873	ENSGT01100000264278	ENSGT00940000160148	ENSGT00530000064271	ENSGT00940000153463.b.b	ENSGT00940000155636.b.a	ENSGT00940000154705.A.b	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000160206.f.a.a.a.b.a.b	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864.a.a	ENSGT00940000155004.s	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT00940000163460.b.q.b	ENSGT01000000218899	ENSGT00940000163460.b.r
Chinese medaka	MODERN SPECIES	744																POLG2 (ENSOSIG00000021584) ##22	DDX5 (ENSOSIG00000020611)	ENSOSIG00000020553	ENSOSIG00000020552	ENSOSIG00000020550	ENSOSIG00000020549	gtpbp2b (ENSOSIG00000020543)	tp53bp2b (ENSOSIG00000020538)	RRP36 (ENSOSIG00000020536)	JAG1 (ENSOSIG00000020506)	ENSOSIG00000020481	ENSOSIG00000020480	slc22a7a (ENSOSIG00000020477)	ATL2 (ENSOSIG00000020415)	HNRNPLL (ENSOSIG00000020394)	ENSOSIG00000020386
Japanese Medaka HdrR	MODERN SPECIES		ENSORLG00000001076	ENSORLG00000001049	HNRNPLL (ENSORLG00000001005)	slc22a7a (ENSORLG00000000981)	ENSORLG00000025624	ENSORLG00000030418	ENSORLG00000000972	rrp36 (ENSORLG00000029500)	tp53bp2b (ENSORLG00000000954)	gtpbp2b (ENSORLG00000000909)	ENSORLG00000001338	ENSORLG00000023254	ENSORLG00000000157	ENSORLG00000030472	DDX5 (ENSORLG00000000866)	POLG2 (ENSORLG00000000860) ##22	srp68 (ENSORLG00000000849)	ENSORLG00000000822	ENSORLG00000000825	ENSORLG00000025993	evpla (ENSORLG00000000815)	ten1 (ENSORLG00000000792)	acox1 (ENSORLG00000000785)	RHBDF2 (ENSORLG00000000754)	aanat1 (ENSORLG00000000725)	UBE2O (ENSORLG00000000718)	SPHK1 (ENSORLG00000000682)	cygb2 (ENSORLG00000000664)	ENSORLG00000025127	ENSORLG00000000639	ubn2a (ENSORLG00000000521)
Pinecone sodierfish	MODERN SPECIES		nol11 (ENSMMDG00005020139)	BPTF (ENSMMDG00005020214)	ENSMMDG00005021143	ENSMMDG00005021146	SMURF2 (ENSMMDG00005021163)	CEP95 (ENSMMDG00005021425)	ENSMMDG00005021514	ENSMMDG00005021524	ENSMMDG00005021525	ENSMMDG00005021526	ENSMMDG00005021528	ENSMMDG00005021532	ENSMMDG00005021536	ENSMMDG00005021537	DDX5 (ENSMMDG00005021543)	POLG2 (ENSMMDG00005021613) ##22	srp68 (ENSMMDG00005021616)	evpla (ENSMMDG00005021619)	ten1 (ENSMMDG00005021624)	acox1 (ENSMMDG00005021633)	RHBDF2 (ENSMMDG00005021675)	aanat1 (ENSMMDG00005021995)	UBE2O (ENSMMDG00005022003)	SPHK1 (ENSMMDG00005022084)	cygb2 (ENSMMDG00005022086)	prpsap1 (ENSMMDG00005022094)	ENSMMDG00005022214	MGAT5B (ENSMMDG00005022218)	ENSMMDG00005022222	ENSMMDG00005022231	DDX39A (ENSMMDG00005022248)
Cod	MODERN SPECIES	16	fam114a1 (ENSGMOG00000024200)	ENSGMOG00000016199	TBC1D1 (ENSGMOG00000000032)	pgm2 (ENSGMOG00000000028)	FBXO10 (ENSGMOG00000003286)	ENSGMOG00000003336	ZBTB5 (ENSGMOG00000003377)	ENSGMOG00000003410	ENSGMOG00000003439	ENSGMOG00000003509	ENSGMOG00000003665	ENSGMOG00000033400	ENSGMOG00000006262	ENSGMOG00000006294	ENSGMOG00000030175	ENSGMOG00000017535 ##22	srp68 (ENSGMOG00000017562)	evpla (ENSGMOG00000017592)	ten1 (ENSGMOG00000017638)	acox1 (ENSGMOG00000017643)	ENSGMOG00000017671	ENSGMOG00000017706	s1pr5b (ENSGMOG00000017756)	ENSGMOG00000034659	fdx2 (ENSGMOG00000012048)	ENSGMOG00000029319	ENSGMOG00000020570	ENSGMOG00000032896	ENSGMOG00000030122	ENSGMOG00000012030	rnf11a (ENSGMOG00000027236)
Osteoglossiformes	ANCESTRAL SPECIES	7	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a.ib	ENSGT00940000160720.b.b	ENSGT00940000160720.b.a	ENSGT00390000009760	ENSGT00940000154830.f	ENSGT00390000002361	ENSGT01050000244891.E.a.a.a	ENSGT00940000155563	ENSGT00390000005412	ENSGT00940000154705.A.a.a	ENSGT00940000153759.a.b ##22	ENSGT00390000011856	ENSGT00940000153578.A.f	ENSGT00390000017589	ENSGT00940000157287	ENSGT00940000159027	ENSGT00390000015579.a.a.a	ENSGT00940000160755	ENSGT00940000157864	ENSGT00940000155004	ENSGT00950000182803.A.a.b	ENSGT00940000163566.a.b	ENSGT00940000153470.a.b.b.k	ENSGT00940000155386	ENSGT00390000011880	ENSGT01060000248591.a.a.b.a.b
P. kingsleyae	MODERN SPECIES	100	APOH (ENSPKIG00000005848)	prkcaa (ENSPKIG00000005932)	cacng5a (ENSPKIG00000006071)	CACNG4 (ENSPKIG00000006093)	cacng1a (ENSPKIG00000006111)	helz (ENSPKIG00000006157)	psmd12 (ENSPKIG00000006249)	ENSPKIG00000006298	nol11 (ENSPKIG00000006353)	BPTF (ENSPKIG00000006417)	ENSPKIG00000006567	ENSPKIG00000006599	smurf2 (ENSPKIG00000006670)	CEP95 (ENSPKIG00000006708)	ddx5 (ENSPKIG00000006762)	POLG2 (ENSPKIG00000006859) ##22	srp68 (ENSPKIG00000006884)	evpla (ENSPKIG00000006941)	ten1 (ENSPKIG00000006975)	acox1 (ENSPKIG00000007125)	RHBDF2 (ENSPKIG00000007473)	aanat1 (ENSPKIG00000007540)	UBE2O (ENSPKIG00000007569)	SPHK1 (ENSPKIG00000007627)	ENSPKIG00000007650	ENSPKIG00000007664	ENSPKIG00000007680	cygb1 (ENSPKIG00000007709)	prpsap1 (ENSPKIG00000007753)	rasd4 (ENSPKIG00000007853)	MGAT5B (ENSPKIG00000007882)
Asian bonytongue	MODERN SPECIES	12	prkcaa (ENSSFOG00015005520)	cacng5a (ENSSFOG00015024944)	CACNG4 (ENSSFOG00015005486)	cacng1a (ENSSFOG00015002923)	helz (ENSSFOG00015005413)	psmd12 (ENSSFOG00015005361)	ENSSFOG00015005335	ENSSFOG00015003532	nol11 (ENSSFOG00015005327)	BPTF (ENSSFOG00015005192)	ENSSFOG00015031946	ENSSFOG00015005119	smurf2 (ENSSFOG00015005039)	CEP95 (ENSSFOG00015005022)	ddx5 (ENSSFOG00015004961)	POLG2 (ENSSFOG00015004948) ##22	srp68 (ENSSFOG00015004897)	evpla (ENSSFOG00015004871)	ten1 (ENSSFOG00015004864)	acox1 (ENSSFOG00015004835)	RHBDF2 (ENSSFOG00015004766)	aanat1 (ENSSFOG00015004736)	UBE2O (ENSSFOG00015025921)	SPHK1 (ENSSFOG00015024403)	ENSSFOG00015004682	cygb1 (ENSSFOG00015030870)	prpsap1 (ENSSFOG00015004635)	rasd4 (ENSSFOG00015004613)	MGAT5B (ENSSFOG00015004549)	SEC14L1 (ENSSFOG00015004438)	ENDOV (ENSSFOG00015004419)
Spotted gar	MODERN SPECIES	648	cep112 (ENSLOCG00000013670)	APOH (ENSLOCG00000013660)	prkcaa (ENSLOCG00000013639)	cacng5a (ENSLOCG00000013635)	cacng4b (ENSLOCG00000013633)	cacng1a (ENSLOCG00000013628)	helz (ENSLOCG00000013617)	psmd12 (ENSLOCG00000013614)	ENSLOCG00000013604	nol11 (ENSLOCG00000013594)	ENSLOCG00000013588	BPTF (ENSLOCG00000013568)	smurf2 (ENSLOCG00000013554)	CEP95 (ENSLOCG00000013542)	ddx5 (ENSLOCG00000013534)	POLG2 (ENSLOCG00000013528) ##22	srp68 (ENSLOCG00000013514)	evpla (ENSLOCG00000013503)	acox1 (ENSLOCG00000013494)	FBF1 (ENSLOCG00000013483)	SPHK1 (ENSLOCG00000013477)	UBE2O (ENSLOCG00000013468)	aanat1 (ENSLOCG00000013462)	RHBDF2 (ENSLOCG00000013458)	ENSLOCG00000017762	ENSLOCG00000013456	prpsap1 (ENSLOCG00000013449)	rasd4 (ENSLOCG00000017761)	pecam1a (ENSLOCG00000013439)	RPTOR (ENSLOCG00000013425)	nptx1l (ENSLOCG00000013419)
Reedfish	MODERN SPECIES	5	helz (ENSECRG00000017333)	cacng1a (ENSECRG00000017404)	cacng4b (ENSECRG00000017428)	cacng5a (ENSECRG00000017483)	prkcaa (ENSECRG00000017536)	APOH (ENSECRG00000017603)	cep112 (ENSECRG00000017643)	axin2 (ENSECRG00000017780)	ENSECRG00000017805	tex2 (ENSECRG00000017834)	ERN1 (ENSECRG00000017885)	kpna2 (ENSECRG00000017931)	smurf2 (ENSECRG00000017972)	CEP95 (ENSECRG00000018043)	ddx5 (ENSECRG00000018113)	POLG2 (ENSECRG00000018187) ##22	srp68 (ENSECRG00000018234)	evpla (ENSECRG00000018336)	ten1 (ENSECRG00000018523)	acox1 (ENSECRG00000018565)	ENSECRG00000018663	ENSECRG00000018690	ENSECRG00000018713	ENSECRG00000018734	ENSECRG00000018745	ENSECRG00000018760	FBF1 (ENSECRG00000018788)	SPHK1 (ENSECRG00000018824)	UBE2O (ENSECRG00000018853)	aanat1 (ENSECRG00000018937)	RHBDF2 (ENSECRG00000019176)
Elephant shark	MODERN SPECIES	1495	ENSCMIG00000019990	cacng5a (ENSCMIG00000019986)	cacng4b (ENSCMIG00000019985)	cacng1a (ENSCMIG00000019983)	helz (ENSCMIG00000019980)	psmd12 (ENSCMIG00000019978)	ENSCMIG00000019977	ENSCMIG00000019976	ENSCMIG00000019975	BPTF (ENSCMIG00000019971)	ENSCMIG00000019967	ENSCMIG00000019966	smurf2 (ENSCMIG00000019964)	CEP95 (ENSCMIG00000019963)	ddx5 (ENSCMIG00000019956)	POLG2 (ENSCMIG00000019935) ##22	ENSCMIG00000019933	rgs9a (ENSCMIG00000019919)	alyref (ENSCMIG00000019914)	arhgdia (ENSCMIG00000019912)	p4hb (ENSCMIG00000019910)	ppp1r27b (ENSCMIG00000019909)	GCGR (ENSCMIG00000019908)	slc25a10b (ENSCMIG00000019906)	mrpl12 (ENSCMIG00000019905)	zgc:103625 (ENSCMIG00000019903)	hgs (ENSCMIG00000019840)	ARL16 (ENSCMIG00000019791)	slc26a11 (ENSCMIG00000019776)	sgsh (ENSCMIG00000019767)	npb (ENSCMIG00000019766)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000153759.a.b ##22
Hagfish	MODERN SPECIES	1337	PPP3R1 (ENSEBUG00000016663)	ENSEBUG00000017042	ENSEBUG00000010799	ENSEBUG00000011831	ntpcr (ENSEBUG00000012022)	ENSEBUG00000015855	ENSEBUG00000014162	ENSEBUG00000009457	ENSEBUG00000013885	cdc5l (ENSEBUG00000016336)	ENSEBUG00000001388	rps2 (ENSEBUG00000016801)	ENSEBUG00000014893	ENSEBUG00000009982	ENSEBUG00000010116	ENSEBUG00000004824 ##22	ENSEBUG00000016215	ENSEBUG00000014242	ENSEBUG00000004725	ENSEBUG00000010371	ENSEBUG00000005415	ENSEBUG00000010101	ENSEBUG00000002425	ENSEBUG00000009487	ech1 (ENSEBUG00000006189)	ENSEBUG00000006113	ercc2 (ENSEBUG00000012984)	lclat1 (ENSEBUG00000009027)	ENSEBUG00000011420
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00940000153759.a.b ##22
Fruitfly	MODERN SPECIES	16	Ance-3 (FBgn0032536)	Acyp (FBgn0025115)	Ance-2 (FBgn0032535)	Ance (FBgn0012037)	Smg5 (FBgn0019890)	CG7968 (FBgn0028532)	CG7953 (FBgn0028533)	CG7916 (FBgn0028534)	CG8997 (FBgn0028920)	CG33306 (FBgn0053306)	CG33307 (FBgn0053307)	CenG1A (FBgn0028509)	mRpS23 (FBgn0260407)	Polr2C (FBgn0026373)	GatC (FBgn0064115)	PolG2 (FBgn0004407) ##22	Orc5 (FBgn0015271)	Arpc1 (FBgn0001961)	PolG1 (FBgn0004406)	b (FBgn0000153)	Sos (FBgn0001965)	CG16888 (FBgn0032533)	CG16865 (FBgn0028919)	Adat1 (FBgn0028658)	CAH1 (FBgn0027844)	Sec71 (FBgn0028538)	CG16863 (FBgn0028931)	Eato (FBgn0028539)	CG16890 (FBgn0028932)	p38b (FBgn0024846)	CG9008 (FBgn0028540)
Bilateria	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Chordata	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Amniota	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Mammalia	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Theria	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Eutheria	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Boreoeutheria	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Laurasiatheria	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Artiodactyla	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Artiodactyla_a	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Artiodactyla_b	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Pecora	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Yarkand deer	MODERN SPECIES	99															ENSCHYG00000011879	ENSCHYG00000011904 ##22
Cetacea	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00940000153759.b ##22
Sperm whale	MODERN SPECIES	782																ENSPCTG00005016865 ##22