Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00900000143489 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00900000143489 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 Artiodactyla ANCESTRAL SPECIES 8 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00900000143489 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.a ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.a ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.a ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Cetacea DUPLICATION Cetacea DUPLICATION Cetacea ANCESTRAL SPECIES 1 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396.a #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.k.a #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.b.a.a.a #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Odontoceti DUPLICATION Odontoceti DUPLICATION Odontoceti ANCESTRAL SPECIES 1 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396.a #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.k.a.a.a #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.b.a.a.a #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Sperm whale MODERN SPECIES 11 RARS (ENSPCTG00005001479) #7 FBLL1 (ENSPCTG00005001496) #8 PANK3 (ENSPCTG00005001499) #9 SLIT3 (ENSPCTG00005001546) #10 SPDL1 (ENSPCTG00005001707) #11 DOCK2 (ENSPCTG00005001760) #12 INSYN2B (ENSPCTG00005001869) #13 FOXI1 (ENSPCTG00005001878) #14 C2H5orf58 (ENSPCTG00005001891) #15 LCP2 (ENSPCTG00005001929) #16 KCNIP1 (ENSPCTG00005002065) #17 KCNMB1 (ENSPCTG00005002175) #18 GABRP (ENSPCTG00005002206) #19 RANBP17 (ENSPCTG00005002281) #20 TLX3 (ENSPCTG00005002353) #21 NPM1 (ENSPCTG00005002370) #22 FGF18 (ENSPCTG00005002388) #23 SMIM23 (ENSPCTG00005002400) #24 FBXW11 (ENSPCTG00005002420) #25 STK10 (ENSPCTG00005002452) #26 EFCAB9 (ENSPCTG00005002503) #27 UBTD2 (ENSPCTG00005002517) #28 SH3PXD2B (ENSPCTG00005002536) #29 NEURL1B (ENSPCTG00005002578) #30 DUSP1 (ENSPCTG00005002618) #31 ERGIC1 (ENSPCTG00005002638) #32 RPL26L1 (ENSPCTG00005002672) #33 ATP6V0E1 (ENSPCTG00005002688) #34 CREBRF (ENSPCTG00005002713) #35 BNIP1 (ENSPCTG00005002731) #36 NKX2-5 (ENSPCTG00005002758) #37 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.k.a.a.a #22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.k.a.a.a #22 Monodontidae ANCESTRAL SPECIES 7 ENSGT00940000156396.a #9 ENSGT00940000159322 #10 ENSGT00960000189361.b ENSGT00940000160211.e ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.k.a.a.a #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.b.a.a.a #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Narwhal MODERN SPECIES 298 PANK3 (ENSMMNG00015006320) #9 SLIT3 (ENSMMNG00015006353) #10 ENSMMNG00015006387 DPEP2 (ENSMMNG00015006401) SPDL1 (ENSMMNG00015006426) #11 DOCK2 (ENSMMNG00015006500) #12 INSYN2B (ENSMMNG00015006594) #13 FOXI1 (ENSMMNG00015006610) #14 C5orf58 (ENSMMNG00015006620) #15 LCP2 (ENSMMNG00015006650) #16 KCNIP1 (ENSMMNG00015006810) #17 KCNMB1 (ENSMMNG00015006894) #18 GABRP (ENSMMNG00015006917) #19 RANBP17 (ENSMMNG00015006966) #20 TLX3 (ENSMMNG00015007005) #21 ENSMMNG00015007049 #22 FGF18 (ENSMMNG00015007127) #23 SMIM23 (ENSMMNG00015007147) #24 FBXW11 (ENSMMNG00015007223) #25 ENSMMNG00015007348 STK10 (ENSMMNG00015007367) #26 EFCAB9 (ENSMMNG00015007406) #27 UBTD2 (ENSMMNG00015007429) #28 SH3PXD2B (ENSMMNG00015007447) #29 NEURL1B (ENSMMNG00015007510) #30 DUSP1 (ENSMMNG00015007561) #31 ERGIC1 (ENSMMNG00015007594) #32 ENSMMNG00015007623 RPL26L1 (ENSMMNG00015007637) #33 ENSMMNG00015007663 #34 CREBRF (ENSMMNG00015007693) #35 Odontoceti ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.k.a.a.b ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.k.a.a.b ##22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.k.a.a.b ##22 Monodontidae ANCESTRAL SPECIES 18 ENSGT00620000088063 ENSGT00940000158228.a ENSGT00940000157785 ENSGT00390000013048.q.b.b ENSGT00940000153378.b.b.f ENSGT00940000160189 ENSGT00390000000475.vb.b ENSGT00390000016054.a ENSGT00940000155095 ENSGT00390000002112 ENSGT00950000183028.a.a.b ENSGT00950000183001.a.b.a ENSGT00390000001627 ENSGT00940000157179 ENSGT00390000011769 ENSGT00940000153052.c.b.a.b.k.a.a.b ##22 ENSGT00940000162208 ENSGT00940000155184 ENSGT00950000182919.A ENSGT00390000007284 ENSGT00730000111138 ENSGT00940000157719 ENSGT00940000164601 ENSGT00940000155625 ENSGT00940000160200 ENSGT00940000154272.A ENSGT00940000156143 ENSGT00940000155377 ENSGT01010000228757 ENSGT00940000155610 ENSGT01100000263525.a.b.b.c.b Beluga whale MODERN SPECIES 80 BACH2 (ENSDLEG00000019443) MAP3K7 (ENSDLEG00000019447) ENSDLEG00000019466 LY6E (ENSDLEG00000019478) EPHA7 (ENSDLEG00000016378) ENSDLEG00000016395 MANEA (ENSDLEG00000016408) FUT9 (ENSDLEG00000016416) ENSDLEG00000016425 UFL1 (ENSDLEG00000016431) FHL5 (ENSDLEG00000016466) GPR63 (ENSDLEG00000016479) NDUFAF4 (ENSDLEG00000016486) KLHL32 (ENSDLEG00000016517) ENSDLEG00000016567 ENSDLEG00000016590 ##22 POU3F2 (ENSDLEG00000016603) FBXL4 (ENSDLEG00000016608) FAXC (ENSDLEG00000016622) COQ3 (ENSDLEG00000016636) PNISR (ENSDLEG00000016648) USP45 (ENSDLEG00000016693) TSTD3 (ENSDLEG00000016726) CCNC (ENSDLEG00000016748) PRDM13 (ENSDLEG00000016823) MCHR2 (ENSDLEG00000016838) SIM1 (ENSDLEG00000016898) ASCC3 (ENSDLEG00000016917) ENSDLEG00000017014 GRIK2 (ENSDLEG00000017039) ENSDLEG00000017099 Narwhal MODERN SPECIES 301 MAP3K7 (ENSMMNG00015009366) ENSMMNG00015009402 ENSMMNG00015009405 ENSMMNG00015009418 EPHA7 (ENSMMNG00015009430) MANEA (ENSMMNG00015009453) FUT9 (ENSMMNG00015009462) ENSMMNG00015009473 UFL1 (ENSMMNG00015009485) FHL5 (ENSMMNG00015009515) GPR63 (ENSMMNG00015009528) NDUFAF4 (ENSMMNG00015009535) KLHL32 (ENSMMNG00015009546) ENSMMNG00015009563 MMS22L (ENSMMNG00015009572) ENSMMNG00015009584 ##22 POU3F2 (ENSMMNG00015009596) FBXL4 (ENSMMNG00015009601) FAXC (ENSMMNG00015009621) COQ3 (ENSMMNG00015009635) PNISR (ENSMMNG00015009651) USP45 (ENSMMNG00015009670) ENSMMNG00015009693 CCNC (ENSMMNG00015009719) PRDM13 (ENSMMNG00015009755) MCHR2 (ENSMMNG00015009778) SIM1 (ENSMMNG00015009809) ASCC3 (ENSMMNG00015009831) ENSMMNG00015009869 GRIK2 (ENSMMNG00015009912) ENSMMNG00015010086 Sperm whale MODERN SPECIES 17 PARPBP (ENSPCTG00005016310) PMCH (ENSPCTG00005016493) IGF1 (ENSPCTG00005016550) PAH (ENSPCTG00005016692) ASCL1 (ENSPCTG00005016858) ENSPCTG00005016886 STAB2 (ENSPCTG00005017013) NT5DC3 (ENSPCTG00005017736) HSP90B1 (ENSPCTG00005018513) C6H12orf73 (ENSPCTG00005018570) ENSPCTG00005018623 TDG (ENSPCTG00005018640) GLT8D2 (ENSPCTG00005018709) HCFC2 (ENSPCTG00005018737) NFYB (ENSPCTG00005018775) ENSPCTG00005018803 ##22 TXNRD1 (ENSPCTG00005018838) ENSPCTG00005019044 CHST11 (ENSPCTG00005019084) ENSPCTG00005019155 SLC41A2 (ENSPCTG00005019190) C6H12orf45 (ENSPCTG00005019243) ALDH1L2 (ENSPCTG00005019294) WASHC4 (ENSPCTG00005019327) APPL2 (ENSPCTG00005019471) C6H12orf75 (ENSPCTG00005019785) ENSPCTG00005019877 NUAK1 (ENSPCTG00005019927) CKAP4 (ENSPCTG00005019993) TCP11L2 (ENSPCTG00005020009) POLR3B (ENSPCTG00005020061) Odontoceti ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.k.a.b ##22 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396.a #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.k.a.b ##22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.b.a.a.a #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000156396.a #9 ENSGT00940000159322 #10 ENSGT00960000189361.b ENSGT00940000160211.e ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.k.a.b ##22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.b.a.a.a #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Vaquita MODERN SPECIES 14 PANK3 (ENSPSNG00000009488) #9 SLIT3 (ENSPSNG00000009404) #10 ENSPSNG00000009359 DPEP2 (ENSPSNG00000009300) SPDL1 (ENSPSNG00000009259) #11 INSYN2B (ENSPSNG00000009217) #13 DOCK2 (ENSPSNG00000008963) #12 FOXI1 (ENSPSNG00000008872) #14 C5orf58 (ENSPSNG00000008844) #15 LCP2 (ENSPSNG00000008524) #16 KCNMB1 (ENSPSNG00000008456) #18 KCNIP1 (ENSPSNG00000008231) #17 GABRP (ENSPSNG00000008024) #19 RANBP17 (ENSPSNG00000007956) #20 TLX3 (ENSPSNG00000007915) #21 ENSPSNG00000007851 ##22 FGF18 (ENSPSNG00000007820) #23 SMIM23 (ENSPSNG00000007767) #24 FBXW11 (ENSPSNG00000007701) #25 ENSPSNG00000007596 STK10 (ENSPSNG00000007570) #26 EFCAB9 (ENSPSNG00000007521) #27 UBTD2 (ENSPSNG00000007475) #28 SH3PXD2B (ENSPSNG00000007402) #29 NEURL1B (ENSPSNG00000007317) #30 DUSP1 (ENSPSNG00000007271) #31 ERGIC1 (ENSPSNG00000007216) #32 RPL26L1 (ENSPSNG00000007180) #33 ENSPSNG00000007148 #34 CREBRF (ENSPSNG00000007099) #35 BNIP1 (ENSPSNG00000007042) #36 Dolphin MODERN SPECIES 2762 RANBP17 (ENSTTRG00000008362) #20 TLX3 (ENSTTRG00000008369) #21 ENSTTRG00000008370 ##22 FGF18 (ENSTTRG00000008375) #23 Blue whale DUPLICATION Blue whale MODERN SPECIES 3 IRAK1BP1 (ENSBMSG00010014893) PHIP (ENSBMSG00010014858) HMGN3 (ENSBMSG00010014805) LCA5 (ENSBMSG00010014743) ENSBMSG00010014719 ELOVL4 (ENSBMSG00010014673) TTK (ENSBMSG00010014603) BCKDHB (ENSBMSG00010014540) ENSBMSG00010014511 ENSBMSG00010014491 TENT5A (ENSBMSG00010014385) ENSBMSG00010014356 ENSBMSG00010014338 IBTK (ENSBMSG00010014267) TPBG (ENSBMSG00010014234) ENSBMSG00010014221 #22 UBE3D (ENSBMSG00010014192) DOP1A (ENSBMSG00010013981) PGM3 (ENSBMSG00010011334) RWDD2A (ENSBMSG00010011300) ME1 (ENSBMSG00010011286) ENSBMSG00010011265 PRSS35 (ENSBMSG00010011257) SNAP91 (ENSBMSG00010011047) RIPPLY2 (ENSBMSG00010010972) CYB5R4 (ENSBMSG00010010955) MRAP2 (ENSBMSG00010010923) CEP162 (ENSBMSG00010010866) TBX18 (ENSBMSG00010010836) ENSBMSG00010010824 NT5E (ENSBMSG00010010752) Blue whale MODERN SPECIES 14 C1QTNF2 (ENSBMSG00010010310) CCNJL (ENSBMSG00010010325) FABP6 (ENSBMSG00010010332) PWWP2A (ENSBMSG00010010346) TTC1 (ENSBMSG00010010355) ADRA1B (ENSBMSG00010010374) ENSBMSG00010010381 IL12B (ENSBMSG00010010391) ENSBMSG00010010400 RNF145 (ENSBMSG00010010449) KCNMB1 (ENSBMSG00010010631) #18 ENSBMSG00010010657 #17 GABRP (ENSBMSG00010010718) #19 RANBP17 (ENSBMSG00010010778) #20 TLX3 (ENSBMSG00010010805) #21 ENSBMSG00010010827 #22 FGF18 (ENSBMSG00010010843) #23 SMIM23 (ENSBMSG00010010861) #24 FBXW11 (ENSBMSG00010010896) #25 ENSBMSG00010010999 STK10 (ENSBMSG00010011007) #26 ENSBMSG00010011019 EFCAB9 (ENSBMSG00010011022) #27 UBTD2 (ENSBMSG00010011030) #28 ENSBMSG00010011045 SH3PXD2B (ENSBMSG00010011059) #29 NEURL1B (ENSBMSG00010011096) #30 DUSP1 (ENSBMSG00010011183) #31 ERGIC1 (ENSBMSG00010011201) #32 RPL26L1 (ENSBMSG00010011223) #33 ENSBMSG00010011236 #34 Cetacea ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.k.b ##22 Odontoceti ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.k.b ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.k.b ##22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.k.b ##22 Vaquita MODERN SPECIES 34 GPR119 (ENSPSNG00000021286) SLC25A14 (ENSPSNG00000021178) ZNF280C (ENSPSNG00000021118) RAB33A (ENSPSNG00000021088) AIFM1 (ENSPSNG00000020896) ELF4 (ENSPSNG00000020769) BCORL1 (ENSPSNG00000020696) ENSPSNG00000020526 ENSPSNG00000020494 ZDHHC9 (ENSPSNG00000020463) SASH3 (ENSPSNG00000020412) XPNPEP2 (ENSPSNG00000020259) ENSPSNG00000020221 OCRL (ENSPSNG00000020175) SMARCA1 (ENSPSNG00000020057) ENSPSNG00000019998 ##22 ENSPSNG00000019967 PRR32 (ENSPSNG00000019940) DCAF12L1 (ENSPSNG00000019924) DCAF12L2 (ENSPSNG00000019910) ENSPSNG00000019888 TENM1 (ENSPSNG00000019528) SH2D1A (ENSPSNG00000019428) STAG2 (ENSPSNG00000019195) XIAP (ENSPSNG00000019138) THOC2 (ENSPSNG00000018864) GRIA3 (ENSPSNG00000018786) ENSPSNG00000018741 ENSPSNG00000018728 ENSPSNG00000018684 C1GALT1C1 (ENSPSNG00000018655) Blue whale MODERN SPECIES 40 ENSBMSG00010016289 FAM199X (ENSBMSG00010016256) ENSBMSG00010020585 SLC25A53 (ENSBMSG00010020578) ENSBMSG00010020566 GPRASP2 (ENSBMSG00010020553) GPRASP1 (ENSBMSG00010020542) BEX5 (ENSBMSG00010020535) ENSBMSG00010020523 ENSBMSG00010020515 NXF3 (ENSBMSG00010020486) BEX4 (ENSBMSG00010020472) ENSBMSG00010020463 ENSBMSG00010020443 TCEAL7 (ENSBMSG00010020437) ENSBMSG00010020430 ##22 TCEAL9 (ENSBMSG00010020422) ENSBMSG00010020404 ENSBMSG00010020360 ARMCX2 (ENSBMSG00010020339) ARMCX3 (ENSBMSG00010020327) ARMCX6 (ENSBMSG00010020308) ARMCX1 (ENSBMSG00010020297) ENSBMSG00010020286 HNRNPH2 (ENSBMSG00010020275) GLA (ENSBMSG00010020265) RPL36A (ENSBMSG00010020241) BTK (ENSBMSG00010019923) ENSBMSG00010019879 TAF7L (ENSBMSG00010019762) DRP2 (ENSBMSG00010019675) Cetacea ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.j ##22 Blue whale MODERN SPECIES 12 TOM1L2 (ENSBMSG00010018782) DRC3 (ENSBMSG00010018714) ATPAF2 (ENSBMSG00010018669) GID4 (ENSBMSG00010018648) DRG2 (ENSBMSG00010018582) ENSBMSG00010018523 ENSBMSG00010018494 ENSBMSG00010018266 ALKBH5 (ENSBMSG00010018177) LLGL1 (ENSBMSG00010018135) FLII (ENSBMSG00010017950) MIEF2 (ENSBMSG00010017885) TOP3A (ENSBMSG00010017785) SMCR8 (ENSBMSG00010017760) SHMT1 (ENSBMSG00010017690) ENSBMSG00010017611 ##22 PRPSAP2 (ENSBMSG00010017502) FAM83G (ENSBMSG00010017451) SLC5A10 (ENSBMSG00010017175) ENSBMSG00010017085 EPN2 (ENSBMSG00010016978) B9D1 (ENSBMSG00010016950) MAPK7 (ENSBMSG00010016904) MFAP4 (ENSBMSG00010016836) RNF112 (ENSBMSG00010016764) ENSBMSG00010016701 ALDH3A2 (ENSBMSG00010016588) SLC47A2 (ENSBMSG00010016487) ALDH3A1 (ENSBMSG00010016408) ULK2 (ENSBMSG00010016175) ENSBMSG00010016130 Pecora ANCESTRAL SPECIES 25 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.a ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 ENSGT00390000005989.a Percora_a DUPLICATION Percora_a ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l #22 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 367 L2HGDH (ENSMMSG00000014759) DMAC2L (ENSMMSG00000014785) CDKL1 (ENSMMSG00000014797) MAP4K5 (ENSMMSG00000014820) ATL1 (ENSMMSG00000014871) SAV1 (ENSMMSG00000014902) NIN (ENSMMSG00000014951) PYGL (ENSMMSG00000015265) ABHD12B (ENSMMSG00000015404) TRIM9 (ENSMMSG00000015468) TMX1 (ENSMMSG00000015541) FRMD6 (ENSMMSG00000015570) GNG2 (ENSMMSG00000015632) ENSMMSG00000015674 NID2 (ENSMMSG00000015694) ENSMMSG00000015752 #22 ENSMMSG00000015763 PTGDR (ENSMMSG00000015794) ENSMMSG00000015839 ENSMMSG00000015854 PLEKHO2 (ENSMMSG00000015873) PIF1 (ENSMMSG00000015904) ENSMMSG00000015991 OAZ2 (ENSMMSG00000016048) ZNF609 (ENSMMSG00000016094) TRIP4 (ENSMMSG00000016140) ENSMMSG00000016175 CSNK1G1 (ENSMMSG00000016321) PPIB (ENSMMSG00000016470) SNX22 (ENSMMSG00000016511) SNX1 (ENSMMSG00000016577) Siberian musk deer MODERN SPECIES 349 SLC39A10 (ENSMMSG00000010018) DNAH7 (ENSMMSG00000010078) ENSMMSG00000010454 #22 STK17B (ENSMMSG00000010475) HECW2 (ENSMMSG00000010520) ENSMMSG00000010563 ENSMMSG00000010586 ENSMMSG00000010610 GTF3C3 (ENSMMSG00000010673) C2orf66 (ENSMMSG00000010760) PGAP1 (ENSMMSG00000010803) ANKRD44 (ENSMMSG00000010957) SF3B1 (ENSMMSG00000011033) COQ10B (ENSMMSG00000011136) HSPD1 (ENSMMSG00000011233) ENSMMSG00000011286 MOB4 (ENSMMSG00000011395) RFTN2 (ENSMMSG00000011573) Bovidae DUPLICATION Bovidae DUPLICATION Bovidae DUPLICATION Bovidae DUPLICATION Bovidae ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.c.a.a.a #22 Caprinae ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.c.a.a.a #22 Goat MODERN SPECIES 12 SPZ1 (ENSCHIG00000003966) ENSCHIG00000010867 PANK3 (ENSCHIG00000017246) #9 SLIT3 (ENSCHIG00000007677) #10 SPDL1 (ENSCHIG00000015214) #11 ENSCHIG00000022506 #12 INSYN2B (ENSCHIG00000008171) #13 FOXI1 (ENSCHIG00000015541) #14 LCP2 (ENSCHIG00000020683) #16 KCNMB1 (ENSCHIG00000016254) #18 ENSCHIG00000019721 KCNIP1 (ENSCHIG00000022505) #17 GABRP (ENSCHIG00000013304) #19 ENSCHIG00000007336 #20 TLX3 (ENSCHIG00000009023) #21 ENSCHIG00000013986 #22 FGF18 (ENSCHIG00000011455) #23 ENSCHIG00000020677 FBXW11 (ENSCHIG00000015807) #25 STK10 (ENSCHIG00000022275) #26 UBTD2 (ENSCHIG00000008177) #28 ENSCHIG00000019482 SH3PXD2B (ENSCHIG00000017285) #29 NEURL1B (ENSCHIG00000011973) #30 DUSP1 (ENSCHIG00000021879) #31 ERGIC1 (ENSCHIG00000000491) #32 RPL26L1 (ENSCHIG00000015371) #33 ENSCHIG00000023731 ##34 CREBRF (ENSCHIG00000011720) #35 BNIP1 (ENSCHIG00000007910) #36 NKX2-5 (ENSCHIG00000017420) #37 Bovinae ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.c.a.a.a #22 Bos ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.c.a.a.a #22 Bos_b ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.c.a.a.a #22 Cow MODERN SPECIES 12 ENSBTAG00000047333 OR5I1FP (ENSBTAG00000000617) SPZ1 (ENSBTAG00000024593) PANK3 (ENSBTAG00000011895) #9 SLIT3 (ENSBTAG00000017746) #10 SPDL1 (ENSBTAG00000008180) #11 DOCK2 (ENSBTAG00000014612) #12 INSYN2B (ENSBTAG00000002134) #13 FOXI1 (ENSBTAG00000014620) #14 LCP2 (ENSBTAG00000009381) #16 KCNMB1 (ENSBTAG00000002985) #18 KCNIP1 (ENSBTAG00000002865) #17 GABRP (ENSBTAG00000002779) #19 RANBP17 (ENSBTAG00000024801) #20 TLX3 (ENSBTAG00000010003) #21 NPM1 (ENSBTAG00000015316) #22 FGF18 (ENSBTAG00000000128) #23 ENSBTAG00000054615 ENSBTAG00000053610 FBXW11 (ENSBTAG00000015376) #25 STK10 (ENSBTAG00000017457) #26 EFCAB9 (ENSBTAG00000008876) #27 UBTD2 (ENSBTAG00000034659) #28 SH3PXD2B (ENSBTAG00000009019) #29 NEURL1B (ENSBTAG00000001429) #30 DUSP1 (ENSBTAG00000013863) #31 ERGIC1 (ENSBTAG00000015955) #32 RPL26L1 (ENSBTAG00000015099) ##33 ATP6V0E1 (ENSBTAG00000015100) ##34 CREBRF (ENSBTAG00000002020) #35 BNIP1 (ENSBTAG00000002021) #36 Bovidae ANCESTRAL SPECIES 22 ENSGT00940000156079 ENSGT00940000157280 ENSGT00940000156658 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 ENSGT00940000158506 ENSGT00940000159760 ENSGT00530000064699 ENSGT00940000159042 ENSGT00390000002143.a ENSGT00940000153052.c.b.a.b.l.c.a.a.b #22 ENSGT00940000158742 ENSGT00940000158547 ENSGT00390000015159.b ENSGT00950000183140.a.a.m.a.a.b ENSGT00940000155285.b.b ENSGT00940000159198 ENSGT00950000182986.a.b.b ENSGT00390000013961 ENSGT00390000011137 ENSGT00390000011759 ENSGT00940000162935 ENSGT00950000183156.a.b.b.b.b.a ENSGT00390000005809 ENSGT00940000156272 ENSGT00940000158932 Bovinae ANCESTRAL SPECIES 18 ENSGT00940000156079 ENSGT00940000157280 ENSGT00940000156658 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 ENSGT00940000158506 ENSGT00940000159760 ENSGT00530000064699 ENSGT00940000159042 ENSGT00390000002143.a ENSGT00940000153052.c.b.a.b.l.c.a.a.b #22 ENSGT00940000158742 ENSGT00940000158547 ENSGT00390000015159.b ENSGT00950000183140.a.a.m.a.a.b ENSGT00940000154509.z ENSGT00940000155285.b.b ENSGT00940000166198 ENSGT00940000160886 ENSGT00940000159198 ENSGT00950000182986.a.b.b ENSGT00390000013961 ENSGT00390000011137 ENSGT00390000011759 ENSGT00940000162935 ENSGT00950000183156.a.b.b.b.b.a Bos ANCESTRAL SPECIES 21 ENSGT00940000156079 ENSGT00940000157280 ENSGT00940000156658 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 ENSGT00940000158506 ENSGT00940000159760 ENSGT00530000064699 ENSGT00940000159042 ENSGT00390000002143.a ENSGT00940000153052.c.b.a.b.l.c.a.a.b #22 ENSGT00940000158742 ENSGT00940000158547 ENSGT00390000015159.b ENSGT00950000183140.a.a.m.a.a.b ENSGT00940000154509.z ENSGT00940000155285.b.b ENSGT00940000166198 ENSGT00940000160886.d ENSGT00940000159198 ENSGT00950000182986.a.b.b ENSGT00390000013961 ENSGT00390000011137 ENSGT00390000011759 ENSGT00940000162935 ENSGT00950000183156.a.b.b.b.b.a Bos_b ANCESTRAL SPECIES 25 ENSGT00940000156079 ENSGT00940000157280 ENSGT00940000156658 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159300 ENSGT00940000159104 ENSGT00940000156215.f ENSGT00390000011144 ENSGT00940000158506 ENSGT00940000159760 ENSGT00530000064699 ENSGT00940000159042.a ENSGT00390000002143.a ENSGT00940000153052.c.b.a.b.l.c.a.a.b #22 ENSGT00940000158742 ENSGT00940000158547 ENSGT00390000015159.b ENSGT00390000018141.i.a.a.a.b.b ENSGT00950000183140.a.a.m.a.a.b ENSGT00940000154509.z ENSGT00940000155285.b.b ENSGT00940000166198 ENSGT00940000160886.d ENSGT00940000159198 ENSGT00950000182986.a.b.b ENSGT00390000013961 ENSGT00390000011137 ENSGT00390000011759 ENSGT00940000162935 Cow MODERN SPECIES 5 FAM135B (ENSBTAG00000018218) KHDRBS3 (ENSBTAG00000002181) ZFAT (ENSBTAG00000017731) ST3GAL1 (ENSBTAG00000001156) NDRG1 (ENSBTAG00000000711) CCN4 (ENSBTAG00000000707) TG (ENSBTAG00000007823) SLA (ENSBTAG00000007828) PHF20L1 (ENSBTAG00000006869) TMEM71 (ENSBTAG00000017138) DNAAF11 (ENSBTAG00000010548) KCNQ3 (ENSBTAG00000020667) HHLA1 (ENSBTAG00000034196) OC90 (ENSBTAG00000007736) EFR3A (ENSBTAG00000047834) ENSBTAG00000003838 #22 ADCY8 (ENSBTAG00000014600) ASAP1 (ENSBTAG00000003185) CYRIB (ENSBTAG00000020801) ENSBTAG00000052291 GSDMC (ENSBTAG00000017478) ENSBTAG00000050216 MYC (ENSBTAG00000008409) ENSBTAG00000052622 ENSBTAG00000050469 LRATD2 (ENSBTAG00000026172) TRIB1 (ENSBTAG00000023179) NSMCE2 (ENSBTAG00000009394) WASHC5 (ENSBTAG00000010275) SQLE (ENSBTAG00000005498) ZNF572 (ENSBTAG00000009072) Hybrid Bos Indicus MODERN SPECIES 5 FAM135B (ENSBIXG00005031125) KHDRBS3 (ENSBIXG00005031144) ZFAT (ENSBIXG00005031165) NDRG1 (ENSBIXG00005031191) CCN4 (ENSBIXG00005031198) TG (ENSBIXG00005031209) ENSBIXG00005031228 SLA (ENSBIXG00005031229) PHF20L1 (ENSBIXG00005031232) TMEM71 (ENSBIXG00005031248) DNAAF11 (ENSBIXG00005031261) KCNQ3 (ENSBIXG00005031272) HHLA1 (ENSBIXG00005031286) ENSBIXG00005031289 EFR3A (ENSBIXG00005031297) ENSBIXG00005031307 #22 ADCY8 (ENSBIXG00005031309) ASAP1 (ENSBIXG00005005233) ENSBIXG00005029009 CYRIB (ENSBIXG00005002096) ENSBIXG00005005063 GSDMC (ENSBIXG00005028921) ENSBIXG00005005029 MYC (ENSBIXG00005028785) ENSBIXG00005004952 ENSBIXG00005004951 ENSBIXG00005002377 ENSBIXG00005028619 ENSBIXG00005006639 LRATD2 (ENSBIXG00005028575) TRIB1 (ENSBIXG00005028498) Bos_a ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.c.a.a.b #22 Wild yak MODERN SPECIES 1148 ENSBMUG00000005495 #22 ADCY8 (ENSBMUG00000005531) ASAP1 (ENSBMUG00000006493) CYRIB (ENSBMUG00000007935) GSDMC (ENSBMUG00000007958) ENSBMUG00000007963 MYC (ENSBMUG00000008022) American bison MODERN SPECIES 3118 EFR3A (ENSBBBG00000023024) ENSBBBG00000022875 #22 ADCY8 (ENSBBBG00000022858) ASAP1 (ENSBBBG00000022792) CYRIB (ENSBBBG00000022674) ENSBBBG00000022581 ENSBBBG00000022571 MYC (ENSBBBG00000022548) Caprinae ANCESTRAL SPECIES 18 ENSGT00940000156079 ENSGT00940000157280 ENSGT00940000156658 ENSGT00940000154725 ENSGT00950000182872.f.a.b ENSGT00940000158587 ENSGT00940000159104 ENSGT00940000159300 ENSGT00940000156215.f ENSGT00390000011144 ENSGT00940000158506 ENSGT00940000159760 ENSGT00530000064699 ENSGT00940000159042 ENSGT00390000002143.a ENSGT00940000153052.c.b.a.b.l.c.a.a.b #22 ENSGT00940000158742 ENSGT00940000158547 ENSGT00390000015159.b ENSGT00950000183140.a.a.m.a.a.b ENSGT00940000155285.b.b ENSGT00940000159198 ENSGT00950000182986.a.b.b ENSGT00390000013961 ENSGT00390000011137 ENSGT00390000011759 ENSGT00940000162935 ENSGT00950000183156.a.b.b.b.b.a ENSGT00390000005809 ENSGT00940000156272 ENSGT00940000158932 Goat MODERN SPECIES 5 ENSCHIG00000019586 KHDRBS3 (ENSCHIG00000016533) ZFAT (ENSCHIG00000013122) ST3GAL1 (ENSCHIG00000021799) NDRG1 (ENSCHIG00000015852) CCN4 (ENSCHIG00000012315) SLA (ENSCHIG00000017077) TG (ENSCHIG00000026405) PHF20L1 (ENSCHIG00000009054) TMEM71 (ENSCHIG00000013935) DNAAF11 (ENSCHIG00000008846) KCNQ3 (ENSCHIG00000022278) HHLA1 (ENSCHIG00000009769) OC90 (ENSCHIG00000014260) EFR3A (ENSCHIG00000022409) ENSCHIG00000008417 #22 ADCY8 (ENSCHIG00000026047) ASAP1 (ENSCHIG00000020558) ENSCHIG00000005794 ENSCHIG00000018918 MYC (ENSCHIG00000013686) LRATD2 (ENSCHIG00000009416) TRIB1 (ENSCHIG00000021266) NSMCE2 (ENSCHIG00000027170) WASHC5 (ENSCHIG00000012199) SQLE (ENSCHIG00000025130) ZNF572 (ENSCHIG00000013612) MTSS1 (ENSCHIG00000023315) NDUFB9 (ENSCHIG00000020741) TATDN1 (ENSCHIG00000024616) RNF139 (ENSCHIG00000021860) Bovidae ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.c.a.b #22 Caprinae ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.c.a.b #22 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 23 FERMT2 (ENSOARG00020012866) SORD (ENSOARG00020012388) DUOX2 (ENSOARG00020011873) DUOXA2 (ENSOARG00020011766) DUOXA1 (ENSOARG00020011656) DUOX1 (ENSOARG00020010050) SHF (ENSOARG00020009604) SLC28A2 (ENSOARG00020009490) GATM (ENSOARG00020009432) SPATA5L1 (ENSOARG00020009315) C15orf48 (ENSOARG00020009251) SLC30A4 (ENSOARG00020009191) BLOC1S6 (ENSOARG00020009083) ENSOARG00020009067 SQOR (ENSOARG00020009009) ENSOARG00020008972 #22 ENSOARG00020008939 ENSOARG00020008904 ENSOARG00020008854 ENSOARG00020008828 ENSOARG00020008814 SEMA6D (ENSOARG00020008460) SLC24A5 (ENSOARG00020008222) MYEF2 (ENSOARG00020007659) CTXN2 (ENSOARG00020007622) SLC12A1 (ENSOARG00020007145) ENSOARG00020006888 FBN1 (ENSOARG00020006413) ENSOARG00020006361 CEP152 (ENSOARG00020006167) ENSOARG00020006136 Rambouillet Sheep MODERN SPECIES 24 ZBTB2 (ENSOARG00020021872) RMND1 (ENSOARG00020021897) ARMT1 (ENSOARG00020021948) CCDC170 (ENSOARG00020021972) ESR1 (ENSOARG00020022045) SYNE1 (ENSOARG00020022335) MYCT1 (ENSOARG00020024842) VIP (ENSOARG00020024851) FBXO5 (ENSOARG00020024869) MTRF1L (ENSOARG00020024904) RGS17 (ENSOARG00020024922) ENSOARG00020024931 OPRM1 (ENSOARG00020024943) IPCEF1 (ENSOARG00020024992) CNKSR3 (ENSOARG00020025010) ENSOARG00020025048 #22 ENSOARG00020025060 ENSOARG00020025094 SCAF8 (ENSOARG00020025109) ENSOARG00020025142 TIAM2 (ENSOARG00020025148) TFB1M (ENSOARG00020025200) CLDN20 (ENSOARG00020025258) NOX3 (ENSOARG00020003085) ENSOARG00020003115 ARID1B (ENSOARG00020003186) TMEM242 (ENSOARG00020003775) ZDHHC14 (ENSOARG00020003801) SNX9 (ENSOARG00020003963) RPS25 (ENSOARG00020004228) SYNJ2 (ENSOARG00020004254) Bovidae DUPLICATION Bovidae ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.c.b.a #22 Bovinae ANCESTRAL SPECIES 8 ENSGT00940000155602.j ENSGT00510000046985.h.b.a.a.a ENSGT00390000000118 ENSGT00950000183188.B ENSGT00390000015035 ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00960000191042 ENSGT00530000063909.b ENSGT00940000160249.e ENSGT00940000159175 ENSGT00940000160249.f ENSGT00940000159418 ENSGT01060000248556.C ENSGT00940000153052.c.b.a.b.l.c.b.a #22 ENSGT00390000010221 ENSGT00940000156016 ENSGT00940000154983.c.b ENSGT01030000234595.B.c.b ENSGT00940000156681 ENSGT00940000158203 ENSGT00940000158437 ENSGT00620000087961.a.b.a.a.a.a ENSGT00940000155209 ENSGT00940000156019 ENSGT00940000153362.a.cb.a.a.b ENSGT01100000263506.a.f.a.a.a.a.b ENSGT00940000159379 ENSGT00940000153372.A.f.s.b ENSGT00940000153372.A.f.t Bos ANCESTRAL SPECIES 8 ENSGT00390000011295.b ENSGT00940000155602.j ENSGT00510000046985.h.b.a.a.a ENSGT00390000000118 ENSGT00950000183188.B ENSGT00390000015035 ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00960000191042 ENSGT00530000063909.b ENSGT00940000160249.e ENSGT00940000159175 ENSGT00940000159418 ENSGT01060000248556.C ENSGT00940000153052.c.b.a.b.l.c.b.a #22 ENSGT00390000010221 ENSGT00940000156016 ENSGT00940000154983.c.b ENSGT01030000234595.B.c.b ENSGT00940000156681 ENSGT00940000158203 ENSGT00940000158437 ENSGT00620000087961.a.b.a.a.a.a ENSGT00940000155209 ENSGT00940000156019 ENSGT00940000153362.a.cb.a.a.b ENSGT01100000263506.a.f.a.a.a.a.b ENSGT00940000159379 ENSGT00940000153372.A.f.s.b ENSGT00940000153372.A.f.t Bos_b ANCESTRAL SPECIES 7 ENSGT00950000183188.B ENSGT00390000015035 ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00960000191042 ENSGT00530000063909.b ENSGT00940000160249.e ENSGT00940000175433 ENSGT00940000155287.p ENSGT00940000159175 ENSGT00950000186219 ENSGT00940000155287.o ENSGT00940000159418 ENSGT01060000248556.C ENSGT00940000153052.c.b.a.b.l.c.b.a #22 ENSGT00390000010221 ENSGT00940000156016 ENSGT00940000154586.j.h ENSGT00940000154983.c.b ENSGT01030000234595.B.c.b ENSGT00940000156681 ENSGT00940000158203 ENSGT00940000158437 ENSGT00620000087961.a.b.a.a.a.a ENSGT00940000155209 ENSGT00940000156019 ENSGT00940000159379 ENSGT00940000153372.A.f.s.b ENSGT00940000153372.A.f.t ENSGT00940000153372.A.f.s.a Hybrid Bos Indicus MODERN SPECIES 23 NUP42 (ENSBIXG00005020467) GPNMB (ENSBIXG00005020528) MALSU1 (ENSBIXG00005003472) IGF2BP3 (ENSBIXG00005020602) TRA2A (ENSBIXG00005020646) CCDC126 (ENSBIXG00005020716) DBF4 (ENSBIXG00005020728) ENSBIXG00005020760 ENSBIXG00005020805 ENSBIXG00005021204 RUNDC3B (ENSBIXG00005021322) ENSBIXG00005021366 ENSBIXG00005021456 ABCB4 (ENSBIXG00005007678) CROT (ENSBIXG00005021594) ENSBIXG00005021635 #22 TMEM243 (ENSBIXG00005021654) DMTF1 (ENSBIXG00005021807) ENSBIXG00005021826 ENSBIXG00005021856 ELAPOR2 (ENSBIXG00005022210) ENSBIXG00005006832 GRM3 (ENSBIXG00005022303) SEMA3D (ENSBIXG00005003818) SEMA3A (ENSBIXG00005022440) SEMA3E (ENSBIXG00005022548) PCLO (ENSBIXG00005022768) ENSBIXG00005022835 ENSBIXG00005022862 CACNA2D1 (ENSBIXG00005023176) HGF (ENSBIXG00005007384) Cow MODERN SPECIES 23 MALSU1 (ENSBTAG00000019403) IGF2BP3 (ENSBTAG00000019406) TRA2A (ENSBTAG00000012622) CCDC126 (ENSBTAG00000013010) ENSBTAG00000052932 DBF4 (ENSBTAG00000014711) SLC25A40 (ENSBTAG00000054987) ENSBTAG00000052947 ENSBTAG00000015666 RUNDC3B (ENSBTAG00000021313) ENSBTAG00000033449 ENSBTAG00000052401 ENSBTAG00000005997 ABCB4 (ENSBTAG00000005653) CROT (ENSBTAG00000021535) ENSBTAG00000035379 #22 TMEM243 (ENSBTAG00000038283) DMTF1 (ENSBTAG00000020878) ENSBTAG00000019276 ELAPOR2 (ENSBTAG00000004023) GRM3 (ENSBTAG00000018989) SEMA3D (ENSBTAG00000024394) SEMA3A (ENSBTAG00000018133) SEMA3E (ENSBTAG00000014920) PCLO (ENSBTAG00000017350) CACNA2D1 (ENSBTAG00000020569) HGF (ENSBTAG00000017664) SEMA3C (ENSBTAG00000006138) ENSBTAG00000047646 ENSBTAG00000014220 CD36 (ENSBTAG00000017866) Bos_a ANCESTRAL SPECIES 12 ENSGT00950000183087.A.a.a.a.a.a.a ENSGT00390000011295.b ENSGT00940000155602.j ENSGT00510000046985.h.b.a.a.a ENSGT00390000000118 ENSGT00950000183188.B ENSGT00390000015035 ENSGT00940000154957.B ENSGT00940000157167 ENSGT00940000153470.a.a.a.b ENSGT00960000191042 ENSGT00530000063909.b ENSGT00940000160249.f ENSGT00940000159418 ENSGT01060000248556.C ENSGT00940000153052.c.b.a.b.l.c.b.a #22 ENSGT00390000010221 ENSGT00940000156016 ENSGT00940000154983.c.b ENSGT01030000234595.B.c.b ENSGT00940000156681 ENSGT00940000158203 ENSGT00940000158437 ENSGT00620000087961.a.b.a.a.a.a ENSGT00940000155209 ENSGT00940000156019 ENSGT00940000153362.a.cb.a.a.b ENSGT01100000263506.a.f.a.a.a.a.b ENSGT00940000159379 ENSGT00940000153372.A.f.s.b ENSGT00940000153372.A.f.t Wild yak MODERN SPECIES 1231 CROT (ENSBMUG00000010674) ENSBMUG00000010705 #22 TMEM243 (ENSBMUG00000010722) DMTF1 (ENSBMUG00000010793) ELAPOR2 (ENSBMUG00000010901) GRM3 (ENSBMUG00000010947) American bison MODERN SPECIES 3314 ABCB1 (ENSBBBG00000002353) ENSBBBG00000001891 ENSBBBG00000002373 CROT (ENSBBBG00000012479) ENSBBBG00000012502 #22 TMEM243 (ENSBBBG00000012514) DMTF1 (ENSBBBG00000012608) ELAPOR2 (ENSBBBG00000007401) GRM3 (ENSBBBG00000001816) Caprinae ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.c.b.a #22 Goat MODERN SPECIES 22 ENSCHIG00000001509 ZFP69 (ENSCHIG00000008554) EXO5 (ENSCHIG00000007542) ZNF684 (ENSCHIG00000014482) ENSCHIG00000018474 RIMS3 (ENSCHIG00000008574) NFYC (ENSCHIG00000021122) KCNQ4 (ENSCHIG00000014613) CITED4 (ENSCHIG00000013877) CTPS1 (ENSCHIG00000026631) SLFNL1 (ENSCHIG00000015962) SCMH1 (ENSCHIG00000024918) FOXO6 (ENSCHIG00000018218) EDN2 (ENSCHIG00000024063) HIVEP3 (ENSCHIG00000011517) ENSCHIG00000012856 #22 GUCA2B (ENSCHIG00000019738) GUCA2A (ENSCHIG00000005275) FOXJ3 (ENSCHIG00000021942) RIMKLA (ENSCHIG00000015404) ZMYND12 (ENSCHIG00000007728) PPCS (ENSCHIG00000022863) CCDC30 (ENSCHIG00000018207) ENSCHIG00000007905 ENSCHIG00000014169 CLDN19 (ENSCHIG00000017870) P3H1 (ENSCHIG00000008788) C1orf50 (ENSCHIG00000015103) ENSCHIG00000017910 SVBP (ENSCHIG00000008164) ENSCHIG00000013284 Bovidae ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.c.b.b #22 Bovinae ANCESTRAL SPECIES 12 ENSGT00390000012490 ENSGT00940000159291 ENSGT00940000154513.B ENSGT00940000154513.A ENSGT00390000007643 ENSGT01030000234558.A.a.a.b ENSGT00390000013727.c ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00390000015127 ENSGT00390000002560 ENSGT00940000153052.c.b.a.b.l.c.b.b #22 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000015231 ENSGT00390000005496.k ENSGT00940000158056 ENSGT00510000047399 ENSGT00940000155005 ENSGT00940000158561 ENSGT01050000245159 ENSGT00950000183161.b ENSGT00940000160256.b ENSGT00940000160945 ENSGT00940000161099 ENSGT00940000162771 ENSGT00940000161339 Bos ANCESTRAL SPECIES 12 ENSGT00390000012490 ENSGT00940000159291 ENSGT00940000154513.B ENSGT00940000154513.A ENSGT00390000007643 ENSGT01030000234558.A.a.a.b ENSGT00390000013727.c ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00390000015127 ENSGT00390000002560 ENSGT00940000153052.c.b.a.b.l.c.b.b #22 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000015231 ENSGT00390000005496.k ENSGT00940000158056 ENSGT00510000047399 ENSGT00940000155005 ENSGT00940000158561 ENSGT01050000245159 ENSGT00950000183161.b ENSGT00940000160256.b ENSGT00940000160945 ENSGT00940000161099 ENSGT00940000162771 ENSGT00940000161339 Bos_b ANCESTRAL SPECIES 9 ENSGT00390000012490 ENSGT00940000159291 ENSGT00940000154513.B ENSGT00940000154513.A ENSGT00390000007643 ENSGT01030000234558.A.a.a.b ENSGT00390000013727.c ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00390000015127 ENSGT00390000002560 ENSGT00940000153052.c.b.a.b.l.c.b.b #22 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000015231 ENSGT00390000005496.k ENSGT00940000158056 ENSGT00510000047399 ENSGT00940000155005 ENSGT00940000158561 ENSGT01050000245159 ENSGT00950000183161.b ENSGT00940000160256.b ENSGT00940000160945 ENSGT00940000161099 ENSGT00940000162771 ENSGT00940000161339 Hybrid Bos Indicus MODERN SPECIES 7 NPPA (ENSBIXG00005021133) ENSBIXG00005021152 KIAA2013 (ENSBIXG00005021208) PLOD1 (ENSBIXG00005021238) MFN2 (ENSBIXG00005021331) MIIP (ENSBIXG00005021362) TNFRSF8 (ENSBIXG00005003612) ENSBIXG00005021444 VPS13D (ENSBIXG00005021515) DHRS3 (ENSBIXG00005021601) AADACL4 (ENSBIXG00005021643) ENSBIXG00005021667 TNFSF4 (ENSBIXG00005021715) ENSBIXG00005021734 TNFSF18 (ENSBIXG00005021755) ENSBIXG00005021775 #22 FASLG (ENSBIXG00005021795) SUCO (ENSBIXG00005021901) ENSBIXG00005003700 C1orf105 (ENSBIXG00005003707) ENSBIXG00005007845 ENSBIXG00005003723 ENSBIXG00005003731 DNM3 (ENSBIXG00005003773) METTL13 (ENSBIXG00005022250) VAMP4 (ENSBIXG00005022319) MYOC (ENSBIXG00005003815) ENSBIXG00005022368 PRRC2C (ENSBIXG00005022520) FMO4 (ENSBIXG00005022627) FMO1 (ENSBIXG00005003889) Cow MODERN SPECIES 7 NPPB (ENSBTAG00000021739) KIAA2013 (ENSBTAG00000019388) PLOD1 (ENSBTAG00000002052) MFN2 (ENSBTAG00000005314) MIIP (ENSBTAG00000019556) TNFRSF8 (ENSBTAG00000039937) TNFRSF1B (ENSBTAG00000024928) VPS13D (ENSBTAG00000016080) DHRS3 (ENSBTAG00000024493) AADACL4 (ENSBTAG00000055061) ENSBTAG00000020550 TNFSF4 (ENSBTAG00000002894) ENSBTAG00000053302 ENSBTAG00000052047 TNFSF18 (ENSBTAG00000047412) ENSBTAG00000016347 #22 FASLG (ENSBTAG00000032808) SUCO (ENSBTAG00000010169) PIGC (ENSBTAG00000024542) C16H1orf105 (ENSBTAG00000051882) ENSBTAG00000048915 DNM3 (ENSBTAG00000014319) METTL13 (ENSBTAG00000017721) VAMP4 (ENSBTAG00000020591) MYOC (ENSBTAG00000020342) PRRC2C (ENSBTAG00000001821) FMO4 (ENSBTAG00000016685) FMO1 (ENSBTAG00000021408) FMO2 (ENSBTAG00000002974) ENSBTAG00000047256 FMO3 (ENSBTAG00000020597) Bos_a ANCESTRAL SPECIES 8 ENSGT00390000012490 ENSGT00940000159291 ENSGT00940000154513.B ENSGT00940000154513.A ENSGT00390000007643 ENSGT01030000234558.A.a.a.b ENSGT00390000013727.c ENSGT00390000003768 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00390000015127 ENSGT00390000002560 ENSGT00940000153052.c.b.a.b.l.c.b.b #22 ENSGT01060000248544.a.a.b.a.b ENSGT00390000013502.b ENSGT00390000015231 ENSGT00390000005496.k ENSGT00940000158056 ENSGT00510000047399 ENSGT00940000155005 ENSGT00940000158561 ENSGT01050000245159 ENSGT00950000183161.b ENSGT00940000160256.b ENSGT00940000160945 ENSGT00940000161099 ENSGT00940000162771 ENSGT00940000161339 Domestic yak MODERN SPECIES 5 CLCN6 (ENSBGRG00000008810) NPPA (ENSBGRG00000008736) ENSBGRG00000008719 KIAA2013 (ENSBGRG00000008665) PLOD1 (ENSBGRG00000008467) MFN2 (ENSBGRG00000008405) MIIP (ENSBGRG00000008345) TNFRSF8 (ENSBGRG00000008246) ENSBGRG00000008217 ENSBGRG00000008122 VPS13D (ENSBGRG00000007620) DHRS3 (ENSBGRG00000007466) AADACL4 (ENSBGRG00000007385) TNFSF4 (ENSBGRG00000007264) TNFSF18 (ENSBGRG00000007180) ENSBGRG00000007138 #22 FASLG (ENSBGRG00000007038) ENSBGRG00000007006 SUCO (ENSBGRG00000006780) C1orf105 (ENSBGRG00000006720) ENSBGRG00000006703 DNM3 (ENSBGRG00000006628) METTL13 (ENSBGRG00000006552) VAMP4 (ENSBGRG00000006462) MYOC (ENSBGRG00000006423) ENSBGRG00000006402 PRRC2C (ENSBGRG00000006273) FMO4 (ENSBGRG00000006161) FMO1 (ENSBGRG00000006062) FMO2 (ENSBGRG00000006034) ENSBGRG00000006029 American bison MODERN SPECIES 3204 MTHFR (ENSBBBG00000022120) CLCN6 (ENSBBBG00000022183) NPPA (ENSBBBG00000022214) NPPB (ENSBBBG00000022221) PLOD1 (ENSBBBG00000022287) MFN2 (ENSBBBG00000022332) MIIP (ENSBBBG00000022339) TNFRSF8 (ENSBBBG00000022357) TNFRSF1B (ENSBBBG00000005898) VPS13D (ENSBBBG00000022620) DHRS3 (ENSBBBG00000022657) AADACL4 (ENSBBBG00000022669) TNFSF4 (ENSBBBG00000022690) ENSBBBG00000022704 TNFSF18 (ENSBBBG00000005979) ENSBBBG00000022731 #22 FASLG (ENSBBBG00000022740) SUCO (ENSBBBG00000007337) ENSBBBG00000022833 C1orf105 (ENSBBBG00000006015) Bovidae ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.d #22 Caprinae ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.d #22 Rambouillet Sheep MODERN SPECIES 5 ENSOARG00020012548 ENSOARG00020012621 ZNF793 (ENSOARG00020012689) ENSOARG00020012902 ZNF383 (ENSOARG00020013124) ENSOARG00020013186 ZNF527 (ENSOARG00020013225) ZNF569 (ENSOARG00020013295) ZNF570 (ENSOARG00020013432) ENSOARG00020013494 ENSOARG00020013516 ENSOARG00020013537 ENSOARG00020013579 ZFP30 (ENSOARG00020013643) ENSOARG00020013728 ENSOARG00020013765 #22 ENSOARG00020013806 ENSOARG00020013828 SIPA1L3 (ENSOARG00020014274) ENSOARG00020014345 DPF1 (ENSOARG00020014415) PPP1R14A (ENSOARG00020014667) ENSOARG00020014802 YIF1B (ENSOARG00020014827) KCNK6 (ENSOARG00020015049) CATSPERG (ENSOARG00020015126) PSMD8 (ENSOARG00020016783) SPRED3 (ENSOARG00020017011) FAM98C (ENSOARG00020017181) RASGRP4 (ENSOARG00020017469) RYR1 (ENSOARG00020021448) Goat MODERN SPECIES 9 ZNF566 (ENSCHIG00000001451) ZFP82 (ENSCHIG00000018313) ENSCHIG00000021469 ENSCHIG00000023659 ZNF793 (ENSCHIG00000026130) ENSCHIG00000021599 ZNF383 (ENSCHIG00000026946) ENSCHIG00000016562 ZNF527 (ENSCHIG00000013920) ZNF569 (ENSCHIG00000015245) ZNF570 (ENSCHIG00000016831) ENSCHIG00000024889 ENSCHIG00000018395 ZFP30 (ENSCHIG00000014053) ENSCHIG00000026239 ENSCHIG00000012256 #22 ENSCHIG00000010861 WDR87 (ENSCHIG00000023559) SIPA1L3 (ENSCHIG00000013381) DPF1 (ENSCHIG00000010729) PPP1R14A (ENSCHIG00000013911) SPINT2 (ENSCHIG00000019574) YIF1B (ENSCHIG00000013902) KCNK6 (ENSCHIG00000021596) CATSPERG (ENSCHIG00000011318) PSMD8 (ENSCHIG00000026335) GGN (ENSCHIG00000017540) SPRED3 (ENSCHIG00000027252) FAM98C (ENSCHIG00000019659) RASGRP4 (ENSCHIG00000027087) RYR1 (ENSCHIG00000014164) Bovinae ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.d #22 Bos ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.d #22 Bos_a ANCESTRAL SPECIES ENSGT00940000153052.c.b.a.b.l.d #22 Domestic yak MODERN SPECIES 2 SECISBP2L (ENSBGRG00000014018) SHC4 (ENSBGRG00000014591) ENSBGRG00000014971 ENSBGRG00000014994 CEP152 (ENSBGRG00000015031) FBN1 (ENSBGRG00000015364) ENSBGRG00000016185 SLC12A1 (ENSBGRG00000016691) CTXN2 (ENSBGRG00000017870) MYEF2 (ENSBGRG00000017891) SLC24A5 (ENSBGRG00000018186) SEMA6D (ENSBGRG00000018349) SQOR (ENSBGRG00000018720) BLOC1S6 (ENSBGRG00000018884) SLC30A4 (ENSBGRG00000018987) ENSBGRG00000019041 #22 C15orf48 (ENSBGRG00000019087) SPATA5L1 (ENSBGRG00000019163) ENSBGRG00000019317 GATM (ENSBGRG00000019341) SLC28A2 (ENSBGRG00000019499) SHF (ENSBGRG00000019626) DUOX1 (ENSBGRG00000020085) DUOXA1 (ENSBGRG00000020344) DUOXA2 (ENSBGRG00000020365) DUOX2 (ENSBGRG00000020426) SORD (ENSBGRG00000020659) ENSBGRG00000021022 FERMT2 (ENSBGRG00000021063) DDHD1 (ENSBGRG00000021474) ENSBGRG00000022535 Percora_a ANCESTRAL SPECIES 26 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.m #22 ENSGT00940000159553 #23 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.a ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 ENSGT00390000005989.a Bovidae ANCESTRAL SPECIES 26 ENSGT00950000182767.a.b.b ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.m #22 ENSGT00940000159553 #23 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.a ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 ENSGT00390000005989.a Bovinae ANCESTRAL SPECIES 25 ENSGT00950000182767.a.b.b ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.m #22 ENSGT00940000159553 #23 ENSGT01000000218258 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.a ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Bos ANCESTRAL SPECIES 26 ENSGT00950000182767.a.b.b ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903.a #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.m #22 ENSGT00940000159553 #23 ENSGT01000000218258 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.a ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Bos_b ANCESTRAL SPECIES 29 ENSGT00950000182767.a.b.b ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903.a #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.m #22 ENSGT00940000159553 #23 ENSGT01000000218258 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.d ##33 ENSGT00940000156866.db.a ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Hybrid Bos Indicus MODERN SPECIES 12 SPZ1 (ENSBIXG00005020375) PANK3 (ENSBIXG00005006597) #9 SLIT3 (ENSBIXG00005020326) #10 SPDL1 (ENSBIXG00005006400) #11 DOCK2 (ENSBIXG00005003380) #12 INSYN2B (ENSBIXG00005003361) #13 FOXI1 (ENSBIXG00005005867) #14 C5orf58 (ENSBIXG00005003342) #15 LCP2 (ENSBIXG00005003334) #16 KCNIP1 (ENSBIXG00005020080) #17 KCNMB1 (ENSBIXG00005019845) #18 GABRP (ENSBIXG00005019798) #19 RANBP17 (ENSBIXG00005019712) #20 TLX3 (ENSBIXG00005019612) #21 ENSBIXG00005019594 #22 FGF18 (ENSBIXG00005019550) #23 ENSBIXG00005003177 ENSBIXG00005019479 FBXW11 (ENSBIXG00005006031) #25 STK10 (ENSBIXG00005019395) #26 EFCAB9 (ENSBIXG00005019383) #27 UBTD2 (ENSBIXG00005007823) #28 ENSBIXG00005003145 SH3PXD2B (ENSBIXG00005019342) #29 NEURL1B (ENSBIXG00005019283) #30 DUSP1 (ENSBIXG00005007821) #31 ENSBIXG00005019189 #32 ENSBIXG00005005519 ##34 ENSBIXG00005019047 CREBRF (ENSBIXG00005002650) #35 Bos_a ANCESTRAL SPECIES 74 ENSGT00950000182767.a.b.b ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903.a #12 ENSGT00530000063787.A #13 ENSGT00940000154903.b #12 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.m #22 ENSGT00940000159553 #23 ENSGT01000000218258 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.a ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Wild yak DUPLICATION Wild yak DUPLICATION Wild yak MODERN SPECIES 482 ENSBMUG00000004445 #22 FASLG (ENSBMUG00000004449) SUCO (ENSBMUG00000004508) DHX40 (ENSBMUG00000004576) CLTC (ENSBMUG00000004781) PTRH2 (ENSBMUG00000004849) VMP1 (ENSBMUG00000004857) TUBD1 (ENSBMUG00000005013) RPS6KB1 (ENSBMUG00000005153) RNFT1 (ENSBMUG00000005201) MED13 (ENSBMUG00000005293) INTS2 (ENSBMUG00000005370) BRIP1 (ENSBMUG00000005448) ENSBMUG00000005455 TBX4 (ENSBMUG00000005499) TBX2 (ENSBMUG00000005516) Wild yak MODERN SPECIES 1354 ENSBMUG00000016895 #22 ENSBMUG00000016914 Wild yak MODERN SPECIES 1742 TLX3 (ENSBMUG00000011396) #21 ENSBMUG00000011348 #22 ENSBMUG00000011272 FGF18 (ENSBMUG00000011249) #23 C5orf58 (ENSBMUG00000011215) #15 LCP2 (ENSBMUG00000011195) #16 KCNMB1 (ENSBMUG00000011058) #18 Domestic yak MODERN SPECIES 15 SPDL1 (ENSBGRG00000019644) #11 INSYN2B (ENSBGRG00000019612) #13 ENSBGRG00000019598 DOCK2 (ENSBGRG00000019387) #12 FOXI1 (ENSBGRG00000019315) #14 C5orf58 (ENSBGRG00000019244) #15 LCP2 (ENSBGRG00000018695) #16 ENSBGRG00000018640 KCNMB1 (ENSBGRG00000018578) #18 ENSBGRG00000018539 KCNIP1 (ENSBGRG00000018093) #17 GABRP (ENSBGRG00000017839) #19 RANBP17 (ENSBGRG00000017600) #20 TLX3 (ENSBGRG00000017540) #21 ENSBGRG00000017519 ENSBGRG00000016969 #22 FGF18 (ENSBGRG00000016855) #23 ENSBGRG00000016831 FBXW11 (ENSBGRG00000016280) #25 EFCAB9 (ENSBGRG00000016153) #27 ENSBGRG00000016111 STK10 (ENSBGRG00000015407) #26 ENSBGRG00000015339 SH3PXD2B (ENSBGRG00000015198) #29 NEURL1B (ENSBGRG00000015084) #30 DUSP1 (ENSBGRG00000015028) #31 ERGIC1 (ENSBGRG00000014556) #32 ENSBGRG00000014439 ##33 ENSBGRG00000014274 ##34 CREBRF (ENSBGRG00000014123) #35 BNIP1 (ENSBGRG00000013853) #36 American bison MODERN SPECIES 3215 TLX3 (ENSBBBG00000011939) #21 ENSBBBG00000011930 #22 FGF18 (ENSBBBG00000011877) #23 ENSBBBG00000011871 ENSBBBG00000007881 FBXW11 (ENSBBBG00000011859) #25 STK10 (ENSBBBG00000011816) #26 EFCAB9 (ENSBBBG00000002192) #27 UBTD2 (ENSBBBG00000011796) #28 SH3PXD2B (ENSBBBG00000011784) #29 NEURL1B (ENSBBBG00000011766) #30 DUSP1 (ENSBBBG00000011749) #31 ERGIC1 (ENSBBBG00000002176) #32 RPL26L1 (ENSBBBG00000011726) #33 ENSBBBG00000011722 ##34 CREBRF (ENSBBBG00000011711) #35 BNIP1 (ENSBBBG00000011701) #36 Caprinae ANCESTRAL SPECIES 24 ENSGT00950000182767.a.b.b ENSGT00940000155046.hb.a.a.a ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.m #22 ENSGT00940000159553 #23 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00390000016262.f ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.db.a ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Rambouillet Sheep MODERN SPECIES 7 ENSOARG00020013520 PANK3 (ENSOARG00020013565) #9 SLIT3 (ENSOARG00020013676) #10 ENSOARG00020014078 SPDL1 (ENSOARG00020014130) #11 DOCK2 (ENSOARG00020014360) #12 INSYN2B (ENSOARG00020014497) #13 FOXI1 (ENSOARG00020014555) #14 C5orf58 (ENSOARG00020014592) #15 LCP2 (ENSOARG00020014665) #16 KCNIP1 (ENSOARG00020015228) #17 KCNMB1 (ENSOARG00020015798) #18 GABRP (ENSOARG00020015850) #19 RANBP17 (ENSOARG00020016041) #20 TLX3 (ENSOARG00020017378) #21 ENSOARG00020017428 #22 FGF18 (ENSOARG00020017567) #23 ENSOARG00020017649 #25 STK10 (ENSOARG00020017936) #26 EFCAB9 (ENSOARG00020018435) #27 UBTD2 (ENSOARG00020018478) #28 ENSOARG00020018509 SH3PXD2B (ENSOARG00020018558) #29 NEURL1B (ENSOARG00020018934) #30 DUSP1 (ENSOARG00020019107) #31 ERGIC1 (ENSOARG00020019165) #32 RPL26L1 (ENSOARG00020019301) #33 ATP6V0E1 (ENSOARG00020019362) ##34 CREBRF (ENSOARG00020019431) #35 BNIP1 (ENSOARG00020019520) #36 NKX2-5 (ENSOARG00020019608) #37 Siberian musk deer MODERN SPECIES 182 PANK3 (ENSMMSG00000018640) #9 SLIT3 (ENSMMSG00000018566) #10 ENSMMSG00000018545 INSYN2B (ENSMMSG00000018530) #13 DOCK2 (ENSMMSG00000018299) #12 FOXI1 (ENSMMSG00000018248) #14 C5orf58 (ENSMMSG00000018219) #15 LCP2 (ENSMMSG00000018116) #16 KCNMB1 (ENSMMSG00000018061) #18 KCNIP1 (ENSMMSG00000017604) #17 GABRP (ENSMMSG00000017535) #19 RANBP17 (ENSMMSG00000017367) #20 TLX3 (ENSMMSG00000017339) #21 ENSMMSG00000017147 #22 FGF18 (ENSMMSG00000017102) #23 FBXW11 (ENSMMSG00000016966) #25 STK10 (ENSMMSG00000016886) #26 EFCAB9 (ENSMMSG00000016840) #27 UBTD2 (ENSMMSG00000016799) #28 SH3PXD2B (ENSMMSG00000016746) #29 NEURL1B (ENSMMSG00000016666) #30 DUSP1 (ENSMMSG00000016631) #31 ERGIC1 (ENSMMSG00000016601) #32 RPL26L1 (ENSMMSG00000016583) #33 ENSMMSG00000016537 ##34 CREBRF (ENSMMSG00000016494) #35 BNIP1 (ENSMMSG00000016447) #36 NKX2-5 (ENSMMSG00000016422) #37 STC2 (ENSMMSG00000016387) Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 17 PANK3 (ENSCHYG00000014230) #9 SLIT3 (ENSCHYG00000014440) #10 ENSCHYG00000014661 ENSCHYG00000014690 #11 DOCK2 (ENSCHYG00000014912) #12 INSYN2B (ENSCHYG00000015911) #13 ENSCHYG00000015974 FOXI1 (ENSCHYG00000016030) #14 C5orf58 (ENSCHYG00000016175) #15 LCP2 (ENSCHYG00000016219) #16 KCNIP1 (ENSCHYG00000016514) #17 KCNMB1 (ENSCHYG00000017009) #18 GABRP (ENSCHYG00000017057) #19 RANBP17 (ENSCHYG00000017272) #20 TLX3 (ENSCHYG00000017695) #21 ENSCHYG00000017754 #22 FGF18 (ENSCHYG00000017882) #23 ENSCHYG00000017940 ENSCHYG00000018065 FBXW11 (ENSCHYG00000018168) #25 STK10 (ENSCHYG00000019133) #26 EFCAB9 (ENSCHYG00000019485) #27 SH3PXD2B (ENSCHYG00000019576) #29 NEURL1B (ENSCHYG00000019690) #30 DUSP1 (ENSCHYG00000019886) #31 ENSCHYG00000019954 #33 ENSCHYG00000020276 ##34 CREBRF (ENSCHYG00000020340) #35 BNIP1 (ENSCHYG00000020650) #36 NKX2-5 (ENSCHYG00000020766) #37 STC2 (ENSCHYG00000020794) Yarkand deer MODERN SPECIES 28 HRK (ENSCHYG00000001314) TESC (ENSCHYG00000001343) ENSCHYG00000001393 FBXO21 (ENSCHYG00000001435) NOS1 (ENSCHYG00000001525) KSR2 (ENSCHYG00000001636) ENSCHYG00000001686 WSB2 (ENSCHYG00000001732) ENSCHYG00000001776 ENSCHYG00000001803 TAOK3 (ENSCHYG00000001860) ENSCHYG00000001934 SRRM4 (ENSCHYG00000001953) HSPB8 (ENSCHYG00000001963) CCDC60 (ENSCHYG00000002012) ENSCHYG00000002119 #22 TMEM233 (ENSCHYG00000002138) PRKAB1 (ENSCHYG00000002156) CIT (ENSCHYG00000002200) ACAD10 (ENSCHYG00000002339) BRAP (ENSCHYG00000002653) ATXN2 (ENSCHYG00000002792) SH2B3 (ENSCHYG00000003120) PHETA1 (ENSCHYG00000003137) CUX2 (ENSCHYG00000003161) MYL2 (ENSCHYG00000003220) CCDC63 (ENSCHYG00000003254) ENSCHYG00000003284 HVCN1 (ENSCHYG00000003320) TCTN1 (ENSCHYG00000003383) PPTC7 (ENSCHYG00000003438) Camelidae ANCESTRAL SPECIES 57 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866.eb ##34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 ENSGT00390000005989.a Arabian camel MODERN SPECIES 14 RARS1 (ENSCDRG00005007078) #7 FBLL1 (ENSCDRG00005007060) #8 PANK3 (ENSCDRG00005007025) #9 SLIT3 (ENSCDRG00005006931) #10 SPDL1 (ENSCDRG00005006854) #11 INSYN2B (ENSCDRG00005006819) #13 DOCK2 (ENSCDRG00005006556) #12 FOXI1 (ENSCDRG00005006523) #14 C5orf58 (ENSCDRG00005006496) #15 LCP2 (ENSCDRG00005006345) #16 KCNMB1 (ENSCDRG00005006283) #18 KCNIP1 (ENSCDRG00005006051) #17 GABRP (ENSCDRG00005005990) #19 RANBP17 (ENSCDRG00005005894) #20 TLX3 (ENSCDRG00005005878) #21 ENSCDRG00005005702 #22 FGF18 (ENSCDRG00005005676) #23 FBXW11 (ENSCDRG00005005462) #25 STK10 (ENSCDRG00005005406) #26 EFCAB9 (ENSCDRG00005005368) #27 UBTD2 (ENSCDRG00005005351) #28 SH3PXD2B (ENSCDRG00005005308) #29 NEURL1B (ENSCDRG00005005289) #30 DUSP1 (ENSCDRG00005005269) #31 ENSCDRG00005005259 #31 ERGIC1 (ENSCDRG00005005118) #32 RPL26L1 (ENSCDRG00005005086) #33 ENSCDRG00005005054 ##34 ENSCDRG00005005036 CREBRF (ENSCDRG00005005000) #35 BNIP1 (ENSCDRG00005004968) #36 Alpaca MODERN SPECIES 2317 ENSVPAG00000002441 #17 GABRP (ENSVPAG00000002443) #19 RANBP17 (ENSVPAG00000002444) #20 ENSVPAG00000002450 #22 Laurasiatheria_b ANCESTRAL SPECIES 9 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Carnivora ANCESTRAL SPECIES 8 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Caniformia ANCESTRAL SPECIES 5 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Canidae ANCESTRAL SPECIES 7 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00940000156866.fb #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 ENSGT00390000005989.a Red fox DUPLICATION Red fox MODERN SPECIES 2 SLIT3 (ENSVVUG00000003018) #10 ENSVVUG00000002978 ENSVVUG00000002972 ENSVVUG00000002959 SPDL1 (ENSVVUG00000002947) #11 INSYN2B (ENSVVUG00000002930) #13 DOCK2 (ENSVVUG00000002823) #12 FOXI1 (ENSVVUG00000002797) #14 LCP2 (ENSVVUG00000002768) #16 KCNMB1 (ENSVVUG00000002761) #18 KCNIP1 (ENSVVUG00000002751) #17 GABRP (ENSVVUG00000002730) #19 ENSVVUG00000002726 RANBP17 (ENSVVUG00000002668) #20 TLX3 (ENSVVUG00000002648) #21 ENSVVUG00000002639 #22 FGF18 (ENSVVUG00000002630) #23 SMIM23 (ENSVVUG00000002597) #24 FBXW11 (ENSVVUG00000002484) #25 STK10 (ENSVVUG00000002418) #26 EFCAB9 (ENSVVUG00000002399) #27 UBTD2 (ENSVVUG00000002372) #28 SH3PXD2B (ENSVVUG00000002354) #29 ENSVVUG00000002314 #30 DUSP1 (ENSVVUG00000002297) #31 ERGIC1 (ENSVVUG00000002261) #32 ENSVVUG00000002223 ##33 ATP6V0E1 (ENSVVUG00000002213) #34 CREBRF (ENSVVUG00000002198) #35 ENSVVUG00000002168 BNIP1 (ENSVVUG00000002123) #36 Red fox MODERN SPECIES 138 ICE1 (ENSVVUG00000017667) ENSVVUG00000017674 MED10 (ENSVVUG00000017687) UBE2QL1 (ENSVVUG00000017689) NSUN2 (ENSVVUG00000017691) SRD5A1 (ENSVVUG00000017694) TENT4A (ENSVVUG00000017702) ADCY2 (ENSVVUG00000017710) CFAP90 (ENSVVUG00000017732) FASTKD3 (ENSVVUG00000017734) MTRR (ENSVVUG00000017737) ENSVVUG00000017745 SEMA5A (ENSVVUG00000017753) TAS2R1 (ENSVVUG00000017784) ENSVVUG00000017786 #22 ATPSCKMT (ENSVVUG00000017833) CCT5 (ENSVVUG00000017838) CMBL (ENSVVUG00000017843) MARCHF6 (ENSVVUG00000017850) ENSVVUG00000017860 ROPN1L (ENSVVUG00000017863) ANKRD33B (ENSVVUG00000017867) DAP (ENSVVUG00000017871) ENSVVUG00000017873 ENSVVUG00000017884 Canis_lupus ANCESTRAL SPECIES 12 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00940000156866.fb #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 ENSGT00390000005989.a ENSGT00940000154979 Dog DUPLICATION Dog MODERN SPECIES 32 FBLL1 (ENSCAFG00845003123) #8 PANK3 (ENSCAFG00845003068) #9 SLIT3 (ENSCAFG00845002910) #10 ENSCAFG00845002862 SPDL1 (ENSCAFG00845002827) #11 INSYN2B (ENSCAFG00845002792) #13 DOCK2 (ENSCAFG00845002659) #12 FOXI1 (ENSCAFG00845002600) #14 C5orf58 (ENSCAFG00845002585) #15 LCP2 (ENSCAFG00845002557) #16 KCNMB1 (ENSCAFG00845002523) #18 KCNIP1 (ENSCAFG00845002324) #17 GABRP (ENSCAFG00845002228) #19 RANBP17 (ENSCAFG00845002032) #20 TLX3 (ENSCAFG00845001907) #21 NPM1 (ENSCAFG00845001853) #22 FGF18 (ENSCAFG00845001658) #23 ENSCAFG00845001623 SMIM23 (ENSCAFG00845001607) #24 FBXW11 (ENSCAFG00845001422) #25 STK10 (ENSCAFG00845001258) #26 EFCAB9 (ENSCAFG00845001213) #27 UBTD2 (ENSCAFG00845001180) #28 SH3PXD2B (ENSCAFG00845001080) #29 NEURL1B (ENSCAFG00845000993) #30 DUSP1 (ENSCAFG00845000953) #31 ERGIC1 (ENSCAFG00845000852) #32 ATP6V0E1 (ENSCAFG00845000758) #34 CREBRF (ENSCAFG00845000727) #35 BNIP1 (ENSCAFG00845000706) #36 NKX2-5 (ENSCAFG00845000634) #37 Dog MODERN SPECIES 8 CDC42EP3 (ENSCAFG00845019687) QPCT (ENSCAFG00845019624) PRKD3 (ENSCAFG00845019448) NDUFAF7 (ENSCAFG00845019113) CEBPZ (ENSCAFG00845018940) SULT6B1 (ENSCAFG00845018874) EIF2AK2 (ENSCAFG00845018782) GPATCH11 (ENSCAFG00845018699) HEATR5B (ENSCAFG00845018460) STRN (ENSCAFG00845018075) VIT (ENSCAFG00845017725) FEZ2 (ENSCAFG00845017471) CRIM1 (ENSCAFG00845017126) ENSCAFG00845016854 PPHLN1 (ENSCAFG00845016821) ENSCAFG00845014510 #22 FAM98A (ENSCAFG00845014458) RASGRP3 (ENSCAFG00845014372) LTBP1 (ENSCAFG00845013785) ENSCAFG00845013624 ENSCAFG00845013573 ENSCAFG00845013291 YIPF4 (ENSCAFG00845013264) SLC30A6 (ENSCAFG00845013180) SPAST (ENSCAFG00845012945) DPY30 (ENSCAFG00845012855) MEMO1 (ENSCAFG00845012779) SRD5A2 (ENSCAFG00845012713) XDH (ENSCAFG00845012424) EHD3 (ENSCAFG00845012374) CAPN14 (ENSCAFG00845012156) Caniformia_b ANCESTRAL SPECIES 4 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Mustelinae ANCESTRAL SPECIES 13 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 American mink DUPLICATION American mink MODERN SPECIES 646 ENSNVIG00000010350 #22 American mink MODERN SPECIES 101 INSYN2B (ENSNVIG00000022610) #13 DOCK2 (ENSNVIG00000022575) #12 FOXI1 (ENSNVIG00000022570) #14 C5orf58 (ENSNVIG00000022567) #15 LCP2 (ENSNVIG00000022495) #16 KCNMB1 (ENSNVIG00000022481) #18 KCNIP1 (ENSNVIG00000022447) #17 GABRP (ENSNVIG00000022383) #19 RANBP17 (ENSNVIG00000022334) #20 TLX3 (ENSNVIG00000022330) #21 ENSNVIG00000022254 #22 FGF18 (ENSNVIG00000022241) #23 FBXW11 (ENSNVIG00000022157) #25 STK10 (ENSNVIG00000022143) #26 EFCAB9 (ENSNVIG00000022124) #27 UBTD2 (ENSNVIG00000022111) #28 SH3PXD2B (ENSNVIG00000022076) #29 NEURL1B (ENSNVIG00000022058) #30 DUSP1 (ENSNVIG00000022051) #31 ERGIC1 (ENSNVIG00000022026) #32 RPL26L1 (ENSNVIG00000022013) #33 ATP6V0E1 (ENSNVIG00000021974) #34 CREBRF (ENSNVIG00000021945) #35 SEC20 (ENSNVIG00000021912) #36 NKX2-5 (ENSNVIG00000021910) #37 STC2 (ENSNVIG00000021901) Ursidae ANCESTRAL SPECIES 24 ENSGT01030000234566.e.b.a.b ENSGT00410000025556.a.a.a.a ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501.a #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.d ##33 ENSGT00390000014165.c.a.b.b.b ##33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 Ursus ANCESTRAL SPECIES 10 ENSGT01030000234566.e.b.a.b ENSGT00410000025556.a.a.a.a ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT01100000266992 ENSGT00940000161316 #14 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501.a #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.d ##33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 ENSGT00390000005989.a Polar bear MODERN SPECIES 179 WWC1 (ENSUMAG00000024728) RARS1 (ENSUMAG00000024723) #7 PANK3 (ENSUMAG00000024718) #9 ENSUMAG00000024717 SLIT3 (ENSUMAG00000024688) #10 SPDL1 (ENSUMAG00000024679) #11 INSYN2B (ENSUMAG00000024676) #13 DOCK2 (ENSUMAG00000024674) #12 ENSUMAG00000024673 FOXI1 (ENSUMAG00000024672) #14 LCP2 (ENSUMAG00000024670) #16 KCNMB1 (ENSUMAG00000024668) #18 KCNIP1 (ENSUMAG00000024667) #17 GABRP (ENSUMAG00000024666) #19 RANBP17 (ENSUMAG00000024660) #20 ENSUMAG00000024653 #22 FGF18 (ENSUMAG00000024652) #23 SMIM23 (ENSUMAG00000024651) #24 FBXW11 (ENSUMAG00000024650) #25 STK10 (ENSUMAG00000024537) #26 EFCAB9 (ENSUMAG00000024536) #27 UBTD2 (ENSUMAG00000024535) #28 SH3PXD2B (ENSUMAG00000024532) #29 DUSP1 (ENSUMAG00000024530) #31 ERGIC1 (ENSUMAG00000024529) #32 ENSUMAG00000024528 ##33 ATP6V0E1 (ENSUMAG00000024527) #34 CREBRF (ENSUMAG00000024526) #35 BNIP1 (ENSUMAG00000024525) #36 STC2 (ENSUMAG00000024523) CPEB4 (ENSUMAG00000024519) Giant Panda MODERN SPECIES 13 WWC1 (ENSAMEG00000006972) RARS1 (ENSAMEG00000007025) #7 FBLL1 (ENSAMEG00000007104) #8 PANK3 (ENSAMEG00000007107) #9 SLIT3 (ENSAMEG00000007141) #10 INSYN2B (ENSAMEG00000008789) #13 DOCK2 (ENSAMEG00000008771) #12 FOXI1 (ENSAMEG00000001516) #14 C5orf58 (ENSAMEG00000023780) #15 LCP2 (ENSAMEG00000004097) #16 KCNMB1 (ENSAMEG00000030560) #18 KCNIP1 (ENSAMEG00000003998) #17 GABRP (ENSAMEG00000003979) #19 RANBP17 (ENSAMEG00000003955) #20 TLX3 (ENSAMEG00000003951) #21 ENSAMEG00000003910 #22 FGF18 (ENSAMEG00000027271) #23 SMIM23 (ENSAMEG00000027396) #24 FBXW11 (ENSAMEG00000011107) #25 STK10 (ENSAMEG00000011144) #26 ENSAMEG00000011187 #27 UBTD2 (ENSAMEG00000011190) #28 SH3PXD2B (ENSAMEG00000027237) #29 NEURL1B (ENSAMEG00000011213) #30 DUSP1 (ENSAMEG00000011224) #31 ERGIC1 (ENSAMEG00000011244) #32 ENSAMEG00000011270 ##33 ATP6V0E1 (ENSAMEG00000029545) #34 CREBRF (ENSAMEG00000011290) #35 NKX2-5 (ENSAMEG00000028084) #37 BNIP1 (ENSAMEG00000011310) #36 Felidae ANCESTRAL SPECIES 6 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Panthera ANCESTRAL SPECIES 6 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 Tiger MODERN SPECIES 88 GABRP (ENSPTIG00000021600) #19 RANBP17 (ENSPTIG00000021586) #20 ENSPTIG00000021568 #22 FGF18 (ENSPTIG00000021564) #23 SMIM23 (ENSPTIG00000021545) #24 FBXW11 (ENSPTIG00000021490) #25 STK10 (ENSPTIG00000021431) #26 EFCAB9 (ENSPTIG00000021425) #27 UBTD2 (ENSPTIG00000021417) #28 SH3PXD2B (ENSPTIG00000021346) #29 ENSPTIG00000021333 #30 DUSP1 (ENSPTIG00000021330) #31 Panthera_a ANCESTRAL SPECIES 3 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 lion MODERN SPECIES RARS1 (ENSPLOG00000010398) #7 FBLL1 (ENSPLOG00000010514) #8 PANK3 (ENSPLOG00000010537) #9 SLIT3 (ENSPLOG00000010630) #10 SPDL1 (ENSPLOG00000010884) #11 DOCK2 (ENSPLOG00000010942) #12 INSYN2B (ENSPLOG00000011126) #13 FOXI1 (ENSPLOG00000011159) #14 C5orf58 (ENSPLOG00000011213) #15 LCP2 (ENSPLOG00000011278) #16 KCNIP1 (ENSPLOG00000011622) #17 KCNMB1 (ENSPLOG00000011886) #18 GABRP (ENSPLOG00000011935) #19 RANBP17 (ENSPLOG00000012173) #20 TLX3 (ENSPLOG00000012406) #21 ENSPLOG00000012460 #22 FGF18 (ENSPLOG00000012527) #23 FBXW11 (ENSPLOG00000012707) #25 STK10 (ENSPLOG00000013044) #26 EFCAB9 (ENSPLOG00000013080) #27 UBTD2 (ENSPLOG00000013141) #28 SH3PXD2B (ENSPLOG00000013192) #29 NEURL1B (ENSPLOG00000013404) #30 DUSP1 (ENSPLOG00000013584) #31 ERGIC1 (ENSPLOG00000013645) #32 RPL26L1 (ENSPLOG00000013719) #33 ATP6V0E1 (ENSPLOG00000013764) #34 CREBRF (ENSPLOG00000013863) #35 BNIP1 (ENSPLOG00000013932) #36 NKX2-5 (ENSPLOG00000014000) #37 STC2 (ENSPLOG00000014037) leopard MODERN SPECIES 18 RARS1 (ENSPPRG00000009833) #7 FBLL1 (ENSPPRG00000020963) #8 PANK3 (ENSPPRG00000009464) #9 SLIT3 (ENSPPRG00000008973) #10 SPDL1 (ENSPPRG00000003639) #11 DOCK2 (ENSPPRG00000002292) #12 INSYN2B (ENSPPRG00000024086) #13 FOXI1 (ENSPPRG00000024120) #14 C5orf58 (ENSPPRG00000024140) #15 LCP2 (ENSPPRG00000024344) #16 KCNIP1 (ENSPPRG00000024956) #17 KCNMB1 (ENSPPRG00000025063) #18 GABRP (ENSPPRG00000025082) #19 RANBP17 (ENSPPRG00000019041) #20 TLX3 (ENSPPRG00000015978) #21 ENSPPRG00000014990 #22 FGF18 (ENSPPRG00000013778) #23 SMIM23 (ENSPPRG00000013401) #24 FBXW11 (ENSPPRG00000012730) #25 STK10 (ENSPPRG00000011731) #26 EFCAB9 (ENSPPRG00000011345) #27 UBTD2 (ENSPPRG00000010187) #28 SH3PXD2B (ENSPPRG00000009689) #29 NEURL1B (ENSPPRG00000009165) #30 DUSP1 (ENSPPRG00000008559) #31 ERGIC1 (ENSPPRG00000008276) #32 RPL26L1 (ENSPPRG00000006918) #33 ATP6V0E1 (ENSPPRG00000006470) #34 CREBRF (ENSPPRG00000005970) #35 BNIP1 (ENSPPRG00000005455) #36 NKX2-5 (ENSPPRG00000004094) #37 Cat MODERN SPECIES RARS1 (ENSFCAG00000022422) #7 PANK3 (ENSFCAG00000024142) #9 SLIT3 (ENSFCAG00000010913) #10 ENSFCAG00000053665 SPDL1 (ENSFCAG00000030561) #11 INSYN2B (ENSFCAG00000003538) #13 DOCK2 (ENSFCAG00000000834) #12 FOXI1 (ENSFCAG00000000835) #14 ENSFCAG00000046620 LCP2 (ENSFCAG00000000836) #16 KCNMB1 (ENSFCAG00000036866) #18 KCNIP1 (ENSFCAG00000031673) #17 GABRP (ENSFCAG00000003782) #19 RANBP17 (ENSFCAG00000024510) #20 TLX3 (ENSFCAG00000035960) #21 NPM1 (ENSFCAG00000030268) #22 FGF18 (ENSFCAG00000007079) #23 SMIM23 (ENSFCAG00000044613) #24 FBXW11 (ENSFCAG00000027834) #25 STK10 (ENSFCAG00000000434) #26 EFCAB9 (ENSFCAG00000016235) #27 UBTD2 (ENSFCAG00000044346) #28 SH3PXD2B (ENSFCAG00000038295) #29 NEURL1B (ENSFCAG00000031157) #30 DUSP1 (ENSFCAG00000037697) #31 ERGIC1 (ENSFCAG00000011258) #32 RPL26L1 (ENSFCAG00000026949) #33 ATP6V0E1 (ENSFCAG00000031789) #34 CREBRF (ENSFCAG00000000534) #35 BNIP1 (ENSFCAG00000000536) #36 NKX2-5 (ENSFCAG00000000539) #37 Laurasiatheria_c ANCESTRAL SPECIES 7 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 ENSGT00390000005989.a Equus DUPLICATION Equus ANCESTRAL SPECIES 50 ENSGT00530000063370.b ENSGT00390000002626 ENSGT00950000182923.C ENSGT00940000162471 ENSGT00940000162077 ENSGT00390000004019 ENSGT00940000160650 ENSGT00940000159671 ENSGT00390000013684 ENSGT00730000111077 ENSGT00940000157386 ENSGT00390000006208.b ENSGT00390000004850 ENSGT00390000000059 ENSGT00390000018130.a.a.b ENSGT00940000153052.c.b.a.b.v #22 ENSGT00940000157272 ENSGT00390000018806 ENSGT00390000014052 ENSGT00390000009869 ENSGT00940000159368 ENSGT01020000230354.B.b.a.b ENSGT00950000183018.a.c ENSGT00390000013777 ENSGT00940000161893 ENSGT00940000155991 ENSGT00940000162366 ENSGT00940000154849.b ENSGT00940000154191.i.b ENSGT00390000013711 ENSGT00940000161542 Horse MODERN SPECIES 29 PES1 (ENSECAG00000002578) GAL3ST1 (ENSECAG00000018909) SEC14L4 (ENSECAG00000049903) SEC14L3 (ENSECAG00000039616) MTFP1 (ENSECAG00000018122) SEC14L2 (ENSECAG00000019540) RNF215 (ENSECAG00000020939) CCDC157 (ENSECAG00000021659) SF3A1 (ENSECAG00000023962) TBC1D10A (ENSECAG00000018611) CASTOR1 (ENSECAG00000024204) OSM (ENSECAG00000042076) LIF (ENSECAG00000030554) HORMAD2 (ENSECAG00000015457) MTMR3 (ENSECAG00000019738) ENSECAG00000018581 #22 ASCC2 (ENSECAG00000023271) ZMAT5 (ENSECAG00000017576) CABP7 (ENSECAG00000020228) NF2 (ENSECAG00000022976) NIPSNAP1 (ENSECAG00000021731) THOC5 (ENSECAG00000011444) NEFH (ENSECAG00000018444) AP1B1 (ENSECAG00000019246) GAS2L1 (ENSECAG00000017735) EWSR1 (ENSECAG00000022120) RHBDD3 (ENSECAG00000022744) EMID1 (ENSECAG00000023554) KREMEN1 (ENSECAG00000008652) C8H22orf31 (ENSECAG00000011607) ZNRF3 (ENSECAG00000011694) Donkey MODERN SPECIES 28 PES1 (ENSEASG00005010295) GAL3ST1 (ENSEASG00005010289) ENSEASG00005010286 SEC14L4 (ENSEASG00005010279) SEC14L3 (ENSEASG00005010272) MTFP1 (ENSEASG00005010270) SEC14L2 (ENSEASG00005010263) RNF215 (ENSEASG00005010261) CCDC157 (ENSEASG00005010257) SF3A1 (ENSEASG00005010254) TBC1D10A (ENSEASG00005010251) CASTOR1 (ENSEASG00005010249) OSM (ENSEASG00005030079) LIF (ENSEASG00005027424) HORMAD2 (ENSEASG00005010236) ENSEASG00005030615 #22 MTMR3 (ENSEASG00005010216) ASCC2 (ENSEASG00005010196) UQCR10 (ENSEASG00005033921) ZMAT5 (ENSEASG00005010189) CABP7 (ENSEASG00005010187) NF2 (ENSEASG00005010184) NIPSNAP1 (ENSEASG00005010096) THOC5 (ENSEASG00005010083) NEFH (ENSEASG00005010080) AP1B1 (ENSEASG00005010070) RASL10A (ENSEASG00005027499) GAS2L1 (ENSEASG00005010066) EWSR1 (ENSEASG00005010055) RHBDD3 (ENSEASG00005010050) EMID1 (ENSEASG00005010047) Equus ANCESTRAL SPECIES 6 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00530000063787.A #13 ENSGT00940000154903 #12 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b.w #22 ENSGT00940000159553 #23 ENSGT00950000183120.e.b.a.a.b.b.a.b ENSGT00390000017300 #24 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 Horse MODERN SPECIES 5 RARS1 (ENSECAG00000024383) #7 PANK3 (ENSECAG00000020948) #9 SLIT3 (ENSECAG00000000495) #10 SPDL1 (ENSECAG00000018544) #11 INSYN2B (ENSECAG00000018408) #13 DOCK2 (ENSECAG00000009761) #12 FOXI1 (ENSECAG00000006873) #14 ENSECAG00000042392 LCP2 (ENSECAG00000021603) #16 KCNMB1 (ENSECAG00000021360) #18 KCNIP1 (ENSECAG00000019400) #17 ENSECAG00000050403 GABRP (ENSECAG00000014418) #19 RANBP17 (ENSECAG00000008393) #20 TLX3 (ENSECAG00000007840) #21 NPM1 (ENSECAG00000021950) #22 FGF18 (ENSECAG00000030850) #23 ENSECAG00000003655 ENSECAG00000049830 SMIM23 (ENSECAG00000018524) #24 FBXW11 (ENSECAG00000011756) #25 STK10 (ENSECAG00000016265) #26 EFCAB9 (ENSECAG00000015586) #27 UBTD2 (ENSECAG00000038912) #28 SH3PXD2B (ENSECAG00000009968) #29 NEURL1B (ENSECAG00000039619) #30 DUSP1 (ENSECAG00000009958) #31 ERGIC1 (ENSECAG00000007541) #32 ENSECAG00000059561 ##33 RPL26L1 (ENSECAG00000000869) #34 CREBRF (ENSECAG00000024559) #35 Chiroptera ANCESTRAL SPECIES 1 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 ENSGT00390000005989.a Microchiroptera ANCESTRAL SPECIES 3 ENSGT00530000063407.b #7 ENSGT00550000074792.a.b #8 ENSGT00940000156396 #9 ENSGT00940000159322 #10 ENSGT00510000047951 #11 ENSGT00940000154903 #12 ENSGT00530000063787.A #13 ENSGT00940000161316 #14 ENSGT00560000078585 #15 ENSGT00940000156835 #16 ENSGT00950000183039.B.b.b #18 ENSGT00940000158048 #17 ENSGT00940000160813 #19 ENSGT00940000153139.B.b #20 ENSGT00940000160629 #21 ENSGT00940000153052.c.b.a.b #22 ENSGT00940000159553 #23 ENSGT00940000155898 #25 ENSGT00940000156818 #26 ENSGT00390000007501 #27 ENSGT00940000156641 #28 ENSGT00940000158396 #29 ENSGT00940000157079.a #30 ENSGT00940000159044 #31 ENSGT00530000063113.C #32 ENSGT00390000014165.c.b #33 ENSGT00940000156866 #34 ENSGT00390000007125.b #35 ENSGT00390000014412 #36 ENSGT00940000158996 #37 ENSGT00390000005989.a Greater horseshoe bat MODERN SPECIES 16 FBLL1 (ENSRFEG00010020446) #8 PANK3 (ENSRFEG00010020457) #9 SLIT3 (ENSRFEG00010020487) #10 SPDL1 (ENSRFEG00010020541) #11 DOCK2 (ENSRFEG00010020581) #12 INSYN2B (ENSRFEG00010020694) #13 FOXI1 (ENSRFEG00010020710) #14 C5orf58 (ENSRFEG00010020729) #15 LCP2 (ENSRFEG00010020758) #16 KCNIP1 (ENSRFEG00010020846) #17 KCNMB1 (ENSRFEG00010020917) #18 GABRP (ENSRFEG00010005792) #19 ENSRFEG00010005874 RANBP17 (ENSRFEG00010005910) #20 TLX3 (ENSRFEG00010005948) #21 ENSRFEG00010006113 #22 FGF18 (ENSRFEG00010006277) #23 FBXW11 (ENSRFEG00010006429) #25 STK10 (ENSRFEG00010006622) #26 EFCAB9 (ENSRFEG00010006675) #27 UBTD2 (ENSRFEG00010006696) #28 SH3PXD2B (ENSRFEG00010006731) #29 NEURL1B (ENSRFEG00010006802) #30 DUSP1 (ENSRFEG00010006882) #31 ERGIC1 (ENSRFEG00010006938) #32 RPL26L1 (ENSRFEG00010007037) #33 ENSRFEG00010007076 #34 CREBRF (ENSRFEG00010007123) #35 BNIP1 (ENSRFEG00010007189) #36 NKX2-5 (ENSRFEG00010007273) #37 STC2 (ENSRFEG00010007301) Megabat MODERN SPECIES 2641 KCNMB1 (ENSPVAG00000002204) #18 KCNIP1 (ENSPVAG00000002206) #17 GABRP (ENSPVAG00000002208) #19 RANBP17 (ENSPVAG00000002209) #20 TLX3 (ENSPVAG00000002210) #21 ENSPVAG00000002211 #22 FGF18 (ENSPVAG00000002212) #23