Amniota	ANCESTRAL SPECIES	31	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00940000167422	ENSGT00940000160312
Mammalia	ANCESTRAL SPECIES	42	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00390000018038	ENSGT00530000064123	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Theria	ANCESTRAL SPECIES	29	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Eutheria	ANCESTRAL SPECIES	27	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Carnivora	ANCESTRAL SPECIES	6	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Caniformia	ANCESTRAL SPECIES	4	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Ursidae	ANCESTRAL SPECIES	20	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00940000164104	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Ursus	ANCESTRAL SPECIES	91	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00940000164104	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
American black bear	MODERN SPECIES	201															ENSUAMG00000015432 #21	IER2 (ENSUAMG00000015429) #22
Polar bear	MODERN SPECIES	464	RTBDN (ENSUMAG00000006251)	MAST1 (ENSUMAG00000006156)	DNASE2 (ENSUMAG00000006143)	GCDH (ENSUMAG00000006134)	SYCE2 (ENSUMAG00000006118)	FARSA (ENSUMAG00000006110)	CALR (ENSUMAG00000006097)	RAD23A (ENSUMAG00000006070)	ENSUMAG00000006067	DAND5 (ENSUMAG00000006065)	NFIX (ENSUMAG00000006053)	LYL1 (ENSUMAG00000006035)	TRMT1 (ENSUMAG00000006027)	ENSUMAG00000006026	ENSUMAG00000006021 #21	ENSUMAG00000006017 #22	CACNA1A (ENSUMAG00000004898)	YJU2B (ENSUMAG00000004756)	MRI1 (ENSUMAG00000004743)	ENSUMAG00000004739	ZSWIM4 (ENSUMAG00000004723)	NANOS3 (ENSUMAG00000004703)	ENSUMAG00000004697	CC2D1A (ENSUMAG00000004689)	DCAF15 (ENSUMAG00000004671)	RFX1 (ENSUMAG00000004593)	RLN3 (ENSUMAG00000004584)	IL27RA (ENSUMAG00000004578)	PALM3 (ENSUMAG00000004555)	C19orf67 (ENSUMAG00000004533)	ENSUMAG00000004525
Giant Panda	MODERN SPECIES	14	DNASE2 (ENSAMEG00000012396)	KLF1 (ENSAMEG00000027076)	GCDH (ENSAMEG00000012411)	SYCE2 (ENSAMEG00000012442)	FARSA (ENSAMEG00000012446)	ENSAMEG00000012487	RAD23A (ENSAMEG00000012527)	GADD45GIP1 (ENSAMEG00000012565)	DAND5 (ENSAMEG00000012568)	ENSAMEG00000012569	ENSAMEG00000027765	LYL1 (ENSAMEG00000026522)	TRMT1 (ENSAMEG00000012598)	NACC1 (ENSAMEG00000012634)	STX10 (ENSAMEG00000012641) #21	IER2 (ENSAMEG00000020275) #22	CACNA1A (ENSAMEG00000012670)	YJU2B (ENSAMEG00000012903)	C19orf53 (ENSAMEG00000012918)	ZSWIM4 (ENSAMEG00000012935)	NANOS3 (ENSAMEG00000012972)	ENSAMEG00000029005	ENSAMEG00000012974	CC2D1A (ENSAMEG00000012975)	PODNL1 (ENSAMEG00000013040)	DCAF15 (ENSAMEG00000013062)	RFX1 (ENSAMEG00000013075)	RLN3 (ENSAMEG00000027838)	IL27RA (ENSAMEG00000013118)	PALM3 (ENSAMEG00000030397)	MISP3 (ENSAMEG00000027357)
Mustelinae	ANCESTRAL SPECIES	45	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Ferret	MODERN SPECIES	185	RTBDN (ENSMPUG00000004582)	MAST1 (ENSMPUG00000004565)	DNASE2 (ENSMPUG00000004550)	KLF1 (ENSMPUG00000004544)	ENSMPUG00000004535	GCDH (ENSMPUG00000004518)	FARSA (ENSMPUG00000004400)	CALR (ENSMPUG00000004348)	RAD23A (ENSMPUG00000004334)	GADD45GIP1 (ENSMPUG00000004344)	NFIX (ENSMPUG00000004325)	LYL1 (ENSMPUG00000004316)	TRMT1 (ENSMPUG00000004210)	NACC1 (ENSMPUG00000004203)	STX10 (ENSMPUG00000004133) #21	IER2 (ENSMPUG00000018705) #22	CACNA1A (ENSMPUG00000003358)	YJU2B (ENSMPUG00000003348)	MRI1 (ENSMPUG00000003316)	C19orf53 (ENSMPUG00000003300)	ZSWIM4 (ENSMPUG00000003286)	NANOS3 (ENSMPUG00000003282)	ENSMPUG00000003271	CC2D1A (ENSMPUG00000003255)	PODNL1 (ENSMPUG00000003251)	RFX1 (ENSMPUG00000003132)	DCAF15 (ENSMPUG00000003126)	RLN3 (ENSMPUG00000003123)	IL27RA (ENSMPUG00000003119)	PALM3 (ENSMPUG00000003113)	MISP3 (ENSMPUG00000003110)
American mink	MODERN SPECIES	233	MAST1 (ENSNVIG00000003827)	DNASE2 (ENSNVIG00000003902)	KLF1 (ENSNVIG00000003918)	GCDH (ENSNVIG00000003925)	SYCE2 (ENSNVIG00000003941)	FARSA (ENSNVIG00000003979)	CALR (ENSNVIG00000004013)	RAD23A (ENSNVIG00000004028)	ENSNVIG00000004059	DAND5 (ENSNVIG00000004073)	NFIX (ENSNVIG00000004082)	LYL1 (ENSNVIG00000004114)	TRMT1 (ENSNVIG00000004121)	NACC1 (ENSNVIG00000004197)	STX10 (ENSNVIG00000004211) #21	IER2 (ENSNVIG00000004234) #22	CACNA1A (ENSNVIG00000004318)	YJU2B (ENSNVIG00000006150)	MRI1 (ENSNVIG00000006189)	C19orf53 (ENSNVIG00000006202)	ZSWIM4 (ENSNVIG00000006210)	NANOS3 (ENSNVIG00000006232)	ENSNVIG00000006245	ENSNVIG00000006254	CC2D1A (ENSNVIG00000006255)	PODNL1 (ENSNVIG00000006307)	DCAF15 (ENSNVIG00000006385)	RFX1 (ENSNVIG00000006441)	RLN3 (ENSNVIG00000006699)	IL27RA (ENSNVIG00000006724)	PALM3 (ENSNVIG00000006881)
Canidae	ANCESTRAL SPECIES		ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404.b	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404.b	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Dingo	MODERN SPECIES	112	DNASE2 (ENSCAFG00020005295)	KLF1 (ENSCAFG00020005300)	GCDH (ENSCAFG00020005305)	ENSCAFG00020005308	FARSA (ENSCAFG00020005315)	CALR (ENSCAFG00020005320)	RAD23A (ENSCAFG00020005332)	GADD45GIP1 (ENSCAFG00020005337)	DAND5 (ENSCAFG00020005339)	NFIX (ENSCAFG00020005352)	LYL1 (ENSCAFG00020005371)	TRMT1 (ENSCAFG00020005397)	NACC1 (ENSCAFG00020005901)	ENSCAFG00020005909 #21	ENSCAFG00020005912 #21	IER2 (ENSCAFG00020005915) #22	CACNA1A (ENSCAFG00020005960)	YJU2B (ENSCAFG00020006657)	MRI1 (ENSCAFG00020006659)	C19orf53 (ENSCAFG00020006664)	ZSWIM4 (ENSCAFG00020006666)	NANOS3 (ENSCAFG00020006694)	ENSCAFG00020006696	CC2D1A (ENSCAFG00020006705)	PODNL1 (ENSCAFG00020006719)	DCAF15 (ENSCAFG00020006741)	RFX1 (ENSCAFG00020006758)	RLN3 (ENSCAFG00020006880)	IL27RA (ENSCAFG00020006884)	PALM3 (ENSCAFG00020006907)	MISP3 (ENSCAFG00020006913)
Dog	MODERN SPECIES	12	MAST1 (ENSCAFG00845015670)	DNASE2 (ENSCAFG00845015604)	KLF1 (ENSCAFG00845015569)	GCDH (ENSCAFG00845015478)	SYCE2 (ENSCAFG00845015391)	FARSA (ENSCAFG00845015291)	CALR (ENSCAFG00845015220)	RAD23A (ENSCAFG00845015161)	GADD45GIP1 (ENSCAFG00845015125)	DAND5 (ENSCAFG00845015107)	NFIX (ENSCAFG00845030565)	ENSCAFG00845030516	TRMT1 (ENSCAFG00845030492)	NACC1 (ENSCAFG00845030474)	STX10 (ENSCAFG00845030435) #21	IER2 (ENSCAFG00845030405) #22	CACNA1A (ENSCAFG00845028149)	CCDC130 (ENSCAFG00845027226)	MRI1 (ENSCAFG00845027181)	C20H19orf53 (ENSCAFG00845027143)	ZSWIM4 (ENSCAFG00845026936)	NANOS3 (ENSCAFG00845026758)	ENSCAFG00845026724	CC2D1A (ENSCAFG00845026441)	PODNL1 (ENSCAFG00845026152)	DCAF15 (ENSCAFG00845026029)	RFX1 (ENSCAFG00845025462)	RLN3 (ENSCAFG00845025377)	IL27RA (ENSCAFG00845025289)	PALM3 (ENSCAFG00845025220)	MISP3 (ENSCAFG00845025166)
Red fox	MODERN SPECIES	182	DNASE2 (ENSVVUG00000024141)	KLF1 (ENSVVUG00000024142)	GCDH (ENSVVUG00000024143)	ENSVVUG00000024144	FARSA (ENSVVUG00000024145)	CALR (ENSVVUG00000024147)	RAD23A (ENSVVUG00000024155)	GADD45GIP1 (ENSVVUG00000024166)	DAND5 (ENSVVUG00000024168)	NFIX (ENSVVUG00000024169)	ENSVVUG00000024173	LYL1 (ENSVVUG00000024174)	TRMT1 (ENSVVUG00000024177)	NACC1 (ENSVVUG00000024182)	ENSVVUG00000024185 #21	IER2 (ENSVVUG00000024187) #22	CACNA1A (ENSVVUG00000024251)	ENSVVUG00000026589	CCDC130 (ENSVVUG00000026733)	MRI1 (ENSVVUG00000026734)	CUNH19orf53 (ENSVVUG00000026738)	ZSWIM4 (ENSVVUG00000026745)	NANOS3 (ENSVVUG00000026757)	CUNH19orf57 (ENSVVUG00000026758)	CC2D1A (ENSVVUG00000026759)	PODNL1 (ENSVVUG00000026761)	DCAF15 (ENSVVUG00000026764)	RFX1 (ENSVVUG00000026765)	RLN3 (ENSVVUG00000026766)	IL27RA (ENSVVUG00000026768)	PALM3 (ENSVVUG00000026777)
Felidae	ANCESTRAL SPECIES	21	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102.b	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Cat	MODERN SPECIES	1	RTBDN (ENSFCAG00000009941)	MAST1 (ENSFCAG00000000475)	DNASE2 (ENSFCAG00000000476)	KLF1 (ENSFCAG00000026066)	GCDH (ENSFCAG00000000477)	FARSA (ENSFCAG00000023511)	CALR (ENSFCAG00000000479)	RAD23A (ENSFCAG00000023315)	GADD45GIP1 (ENSFCAG00000034587)	DAND5 (ENSFCAG00000043469)	NFIX (ENSFCAG00000000481)	ENSFCAG00000000482	TRMT1 (ENSFCAG00000000483)	NACC1 (ENSFCAG00000025613)	STX10 (ENSFCAG00000000484) #21	IER2 (ENSFCAG00000000485) #22	CACNA1A (ENSFCAG00000000486)	MRI1 (ENSFCAG00000011508)	ENSFCAG00000044597	ZSWIM4 (ENSFCAG00000003715)	NANOS3 (ENSFCAG00000003717)	BRME1 (ENSFCAG00000003718)	CC2D1A (ENSFCAG00000003719)	PODNL1 (ENSFCAG00000003720)	DCAF15 (ENSFCAG00000014364)	RFX1 (ENSFCAG00000003721)	RLN3 (ENSFCAG00000027164)	PALM3 (ENSFCAG00000041444)	IL27RA (ENSFCAG00000003723)	MISP3 (ENSFCAG00000040950)	CA2H19orf67 (ENSFCAG00000009466)
Panthera	ANCESTRAL SPECIES	15	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102.b	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102.b	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
leopard	MODERN SPECIES	110	MAST1 (ENSPPRG00000014214)	DNASE2 (ENSPPRG00000015132)	KLF1 (ENSPPRG00000016685)	GCDH (ENSPPRG00000020586)	SYCE2 (ENSPPRG00000021729)	FARSA (ENSPPRG00000000346)	CALR (ENSPPRG00000000511)	RAD23A (ENSPPRG00000002419)	GADD45GIP1 (ENSPPRG00000002575)	DAND5 (ENSPPRG00000002664)	NFIX (ENSPPRG00000007036)	LYL1 (ENSPPRG00000008858)	TRMT1 (ENSPPRG00000012117)	NACC1 (ENSPPRG00000012438)	STX10 (ENSPPRG00000014043) #21	IER2 (ENSPPRG00000021487) #22	CACNA1A (ENSPPRG00000002365)	YJU2B (ENSPPRG00000005736)	MRI1 (ENSPPRG00000006539)	C19orf53 (ENSPPRG00000006905)	ZSWIM4 (ENSPPRG00000009270)	NANOS3 (ENSPPRG00000009573)	ENSPPRG00000009886	CC2D1A (ENSPPRG00000010376)	PODNL1 (ENSPPRG00000010654)	DCAF15 (ENSPPRG00000011956)	RFX1 (ENSPPRG00000012284)	RLN3 (ENSPPRG00000012695)	IL27RA (ENSPPRG00000013931)	MISP3 (ENSPPRG00000018582)	C19orf67 (ENSPPRG00000020108)
lion	MODERN SPECIES	2	MAST1 (ENSPLOG00000014769)	DNASE2 (ENSPLOG00000015142)	KLF1 (ENSPLOG00000015199)	GCDH (ENSPLOG00000015264)	SYCE2 (ENSPLOG00000015466)	FARSA (ENSPLOG00000015558)	CALR (ENSPLOG00000015775)	RAD23A (ENSPLOG00000015869)	GADD45GIP1 (ENSPLOG00000015943)	DAND5 (ENSPLOG00000015976)	NFIX (ENSPLOG00000016031)	LYL1 (ENSPLOG00000016418)	TRMT1 (ENSPLOG00000016470)	NACC1 (ENSPLOG00000016708)	STX10 (ENSPLOG00000016759) #21	IER2 (ENSPLOG00000016822) #22	CACNA1A (ENSPLOG00000017530)	YJU2B (ENSPLOG00000021795)	MRI1 (ENSPLOG00000021817)	C19orf53 (ENSPLOG00000021831)	ZSWIM4 (ENSPLOG00000021842)	NANOS3 (ENSPLOG00000021885)	ENSPLOG00000021891	CC2D1A (ENSPLOG00000022083)	PODNL1 (ENSPLOG00000022445)	DCAF15 (ENSPLOG00000022465)	RFX1 (ENSPLOG00000022475)	RLN3 (ENSPLOG00000022484)	IL27RA (ENSPLOG00000022499)	PALM3 (ENSPLOG00000022520)	MISP3 (ENSPLOG00000022524)
Tiger	MODERN SPECIES	580	RNASEH2A (ENSPTIG00000013366)	RTBDN (ENSPTIG00000013220)	ENSPTIG00000012815	DNASE2 (ENSPTIG00000012774)	ENSPTIG00000012710	GCDH (ENSPTIG00000012466)	SYCE2 (ENSPTIG00000011935)	FARSA (ENSPTIG00000011502)	CALR (ENSPTIG00000011152)	RAD23A (ENSPTIG00000010565)	ENSPTIG00000010514	DAND5 (ENSPTIG00000010336)	NFIX (ENSPTIG00000009075)	TRMT1 (ENSPTIG00000008833)	STX10 (ENSPTIG00000008273) #21	ENSPTIG00000008052 #22	YJU2B (ENSPTIG00000005555)	MRI1 (ENSPTIG00000005216)	C19orf53 (ENSPTIG00000004139)	ZSWIM4 (ENSPTIG00000001122)	NANOS3 (ENSPTIG00000000325)	ENSPTIG00000000031	CC2D1A (ENSPTIG00000021588)	RLN3 (ENSPTIG00000021464)	ENSPTIG00000021368	C19orf67 (ENSPTIG00000021323)	PRKACA (ENSPTIG00000021292)	ASF1B (ENSPTIG00000021042)	ENSPTIG00000020966	ADGRL1 (ENSPTIG00000018453)	ADGRE5 (ENSPTIG00000017854)
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Chiroptera	ANCESTRAL SPECIES	60	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Microchiroptera	ANCESTRAL SPECIES	51	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Greater horseshoe bat	MODERN SPECIES	9	DNASE2 (ENSRFEG00010021305)	KLF1 (ENSRFEG00010021300)	GCDH (ENSRFEG00010021270)	SYCE2 (ENSRFEG00010021245)	FARSA (ENSRFEG00010021230)	CALR (ENSRFEG00010021212)	RAD23A (ENSRFEG00010021198)	GADD45GIP1 (ENSRFEG00010021188)	DAND5 (ENSRFEG00010021178)	ENSRFEG00010021172	NFIX (ENSRFEG00010021037)	LYL1 (ENSRFEG00010020997)	TRMT1 (ENSRFEG00010020964)	NACC1 (ENSRFEG00010020944)	STX10 (ENSRFEG00010020918) #21	IER2 (ENSRFEG00010020910) #22	CACNA1A (ENSRFEG00010012402)	YJU2B (ENSRFEG00010011786)	MRI1 (ENSRFEG00010011758)	C19orf53 (ENSRFEG00010011715)	ZSWIM4 (ENSRFEG00010011662)	NANOS3 (ENSRFEG00010011622)	ENSRFEG00010011572	CC2D1A (ENSRFEG00010010723)	PODNL1 (ENSRFEG00010010558)	DCAF15 (ENSRFEG00010010497)	RFX1 (ENSRFEG00010010442)	RLN3 (ENSRFEG00010010382)	IL27RA (ENSRFEG00010010284)	PALM3 (ENSRFEG00010010244)	MISP3 (ENSRFEG00010010210)
Megabat	MODERN SPECIES	2568										DAND5 (ENSPVAG00000015073)	NFIX (ENSPVAG00000015074)	LYL1 (ENSPVAG00000015075)	TRMT1 (ENSPVAG00000015076)	NACC1 (ENSPVAG00000015077)	STX10 (ENSPVAG00000015078) #21	IER2 (ENSPVAG00000015079) #22	CACNA1A (ENSPVAG00000015081)
Equus	ANCESTRAL SPECIES	55	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Donkey	MODERN SPECIES	12	DNASE2 (ENSEASG00005004105)	KLF1 (ENSEASG00005004104)	GCDH (ENSEASG00005004102)	ENSEASG00005034575	FARSA (ENSEASG00005004093)	CALR (ENSEASG00005004089)	RAD23A (ENSEASG00005004081)	GADD45GIP1 (ENSEASG00005035955)	DAND5 (ENSEASG00005004075)	ENSEASG00005028746	NFIX (ENSEASG00005004061)	LYL1 (ENSEASG00005024646)	TRMT1 (ENSEASG00005004050)	NACC1 (ENSEASG00005004040)	ENSEASG00005004032 #21	IER2 (ENSEASG00005034811) #22	CACNA1A (ENSEASG00005000422)	YJU2B (ENSEASG00005000166)	MRI1 (ENSEASG00005000151)	C19orf53 (ENSEASG00005025989)	ZSWIM4 (ENSEASG00005015317)	NANOS3 (ENSEASG00005015313)	ENSEASG00005032947	CC2D1A (ENSEASG00005015309)	PODNL1 (ENSEASG00005015307)	DCAF15 (ENSEASG00005015306)	RFX1 (ENSEASG00005015303)	RLN3 (ENSEASG00005038338)	IL27RA (ENSEASG00005015299)	PALM3 (ENSEASG00005015298)	MISP3 (ENSEASG00005015296)
Horse	MODERN SPECIES	28	DNASE2 (ENSECAG00000018970)	KLF1 (ENSECAG00000027715)	GCDH (ENSECAG00000012495)	SYCE2 (ENSECAG00000052051)	FARSA (ENSECAG00000015139)	CALR (ENSECAG00000008164)	RAD23A (ENSECAG00000024607)	DAND5 (ENSECAG00000024508)	GADD45GIP1 (ENSECAG00000003766)	ENSECAG00000031092	NFIX (ENSECAG00000019690)	LYL1 (ENSECAG00000028699)	TRMT1 (ENSECAG00000016149)	NACC1 (ENSECAG00000015051)	STX10 (ENSECAG00000013775) #21	IER2 (ENSECAG00000041395) #22	CACNA1A (ENSECAG00000016371)	YJU2B (ENSECAG00000012731)	C7H19orf53 (ENSECAG00000010593)	ZSWIM4 (ENSECAG00000006600)	NANOS3 (ENSECAG00000016293)	BRME1 (ENSECAG00000029150)	CC2D1A (ENSECAG00000014906)	PODNL1 (ENSECAG00000016452)	DCAF15 (ENSECAG00000016571)	RFX1 (ENSECAG00000016589)	IL27RA (ENSECAG00000011964)	MISP3 (ENSECAG00000035018)	PALM3 (ENSECAG00000030644)	C7H19orf67 (ENSECAG00000008641)	ENSECAG00000026959
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00860000135639	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Suina	ANCESTRAL SPECIES	16	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Chacoan peccary	MODERN SPECIES	769	RTBDN (ENSCWAG00000000515)	MAST1 (ENSCWAG00000000559)	DNASE2 (ENSCWAG00000000717)	KLF1 (ENSCWAG00000000736)	GCDH (ENSCWAG00000000760)	SYCE2 (ENSCWAG00000000797)	FARSA (ENSCWAG00000000829)	CALR (ENSCWAG00000000858)	RAD23A (ENSCWAG00000000887)	GADD45GIP1 (ENSCWAG00000000909)	NFIX (ENSCWAG00000000950)	LYL1 (ENSCWAG00000001006)	TRMT1 (ENSCWAG00000001026)	NACC1 (ENSCWAG00000001107)	STX10 (ENSCWAG00000001131) #21	IER2 (ENSCWAG00000001159) #22	CACNA1A (ENSCWAG00000001583)	YJU2B (ENSCWAG00000005691)	MRI1 (ENSCWAG00000005715)	C19orf53 (ENSCWAG00000005735)	ZSWIM4 (ENSCWAG00000005771)	NANOS3 (ENSCWAG00000005863)	ENSCWAG00000005882	CC2D1A (ENSCWAG00000005927)	PODNL1 (ENSCWAG00000005980)	DCAF15 (ENSCWAG00000006021)	RFX1 (ENSCWAG00000006056)	RLN3 (ENSCWAG00000006130)	IL27RA (ENSCWAG00000006159)	PALM3 (ENSCWAG00000006223)	MISP3 (ENSCWAG00000006355)
Pig	MODERN SPECIES	10	MAST1 (ENSSSCG00000013732)	DNASE2 (ENSSSCG00000013731)	KLF1 (ENSSSCG00000013730)	GCDH (ENSSSCG00000013729)	SYCE2 (ENSSSCG00000013740)	FARSA (ENSSSCG00000013745)	CALR (ENSSSCG00000013746)	GADD45GIP1 (ENSSSCG00000034859)	RAD23A (ENSSSCG00000013747)	ENSSSCG00000048273	NFIX (ENSSSCG00000013742)	LYL1 (ENSSSCG00000024549)	TRMT1 (ENSSSCG00000013744)	NACC1 (ENSSSCG00000013751)	STX10 (ENSSSCG00000013752) #21	IER2 (ENSSSCG00000013753) #22	CACNA1A (ENSSSCG00000013754)	YJU2B (ENSSSCG00000013755)	MRI1 (ENSSSCG00000013756)	C19orf53 (ENSSSCG00000013757)	ZSWIM4 (ENSSSCG00000013758)	NANOS3 (ENSSSCG00000013759)	ENSSSCG00000013760	CC2D1A (ENSSSCG00000013761)	PODNL1 (ENSSSCG00000013762)	DCAF15 (ENSSSCG00000013763)	RFX1 (ENSSSCG00000013764)	ENSSSCG00000045290	RLN3 (ENSSSCG00000013765)	IL27RA (ENSSSCG00000013766)	PALM3 (ENSSSCG00000013767)
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00860000135639	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Camelidae	ANCESTRAL SPECIES	69	ENSGT00390000010768	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916
Arabian camel	MODERN SPECIES	14	RTBDN (ENSCDRG00005022192)	MAST1 (ENSCDRG00005022190)	DNASE2 (ENSCDRG00005022189)	KLF1 (ENSCDRG00005022188)	GCDH (ENSCDRG00005022187)	FARSA (ENSCDRG00005022184)	CALR (ENSCDRG00005022183)	RAD23A (ENSCDRG00005022180)	GADD45GIP1 (ENSCDRG00005022178)	ENSCDRG00005022176	NFIX (ENSCDRG00005022174)	LYL1 (ENSCDRG00005022168)	TRMT1 (ENSCDRG00005022165)	NACC1 (ENSCDRG00005022164)	STX10 (ENSCDRG00005022163) #21	IER2 (ENSCDRG00005022160) #22	CACNA1A (ENSCDRG00005018624)	YJU2B (ENSCDRG00005017211)	MRI1 (ENSCDRG00005017143)	C19orf53 (ENSCDRG00005017111)	ZSWIM4 (ENSCDRG00005017026)	NANOS3 (ENSCDRG00005016971)	ENSCDRG00005016955	ENSCDRG00005016926	PODNL1 (ENSCDRG00005016538)	DCAF15 (ENSCDRG00005016473)	RFX1 (ENSCDRG00005016416)	RLN3 (ENSCDRG00005016381)	IL27RA (ENSCDRG00005016180)	PALM3 (ENSCDRG00005016115)	MISP3 (ENSCDRG00005016060)
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00860000135639	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a.m	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00860000135639	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a.m	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00860000135639	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Sperm whale	MODERN SPECIES	11	ENSPCTG00005013462	ENSPCTG00005013486	OR1M1 (ENSPCTG00005013520)	ENSPCTG00005013549	ENSPCTG00005013683	ENSPCTG00005014021	ENSPCTG00005014073	ENSPCTG00005014150	ENSPCTG00005014212	MAN2B1 (ENSPCTG00005014341)	NFIX (ENSPCTG00005015199)	LYL1 (ENSPCTG00005015333)	TRMT1 (ENSPCTG00005015397)	NACC1 (ENSPCTG00005015809)	STX10 (ENSPCTG00005015864) #21	IER2 (ENSPCTG00005016181) #22	CACNA1A (ENSPCTG00005016871)	IL27RA (ENSPCTG00005022303)	PALM3 (ENSPCTG00005022310)	MISP3 (ENSPCTG00005004751)	NANOS3 (ENSPCTG00005004775)	ENSPCTG00005004792	DNAJB1 (ENSPCTG00005004866)	ADGRL1 (ENSPCTG00005004909)	ENSPCTG00005004947	ADGRE3 (ENSPCTG00005005032)	ENSPCTG00005005335	ZNF333 (ENSPCTG00005005365)	ELAVL3 (ENSPCTG00005005438)	RGL3 (ENSPCTG00005005500)	EPOR (ENSPCTG00005005692)
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a.m	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00860000135639	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Dolphin	MODERN SPECIES	2169										DAND5 (ENSTTRG00000006359)	NFIX (ENSTTRG00000006368)	LYL1 (ENSTTRG00000006376)	TRMT1 (ENSTTRG00000006379)	NACC1 (ENSTTRG00000006384)	STX10 (ENSTTRG00000006387) #21	IER2 (ENSTTRG00000006388) #22
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a.m	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a.m	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Narwhal	MODERN SPECIES	298	MAST1 (ENSMMNG00015004880)	DNASE2 (ENSMMNG00015004869)	KLF1 (ENSMMNG00015004865)	GCDH (ENSMMNG00015004861)	SYCE2 (ENSMMNG00015004858)	FARSA (ENSMMNG00015004851)	ENSMMNG00015004845	RAD23A (ENSMMNG00015004840)	GADD45GIP1 (ENSMMNG00015005584)	ENSMMNG00015005553	NFIX (ENSMMNG00015005457)	LYL1 (ENSMMNG00015005401)	TRMT1 (ENSMMNG00015005352)	NACC1 (ENSMMNG00015005326)	STX10 (ENSMMNG00015005279) #21	IER2 (ENSMMNG00015005251) #22	CACNA1A (ENSMMNG00015004782)	YJU2B (ENSMMNG00015004541)	MRI1 (ENSMMNG00015004525)	C19orf53 (ENSMMNG00015004514)	ZSWIM4 (ENSMMNG00015004504)	NANOS3 (ENSMMNG00015004460)	ENSMMNG00015004453	CC2D1A (ENSMMNG00015004418)	PODNL1 (ENSMMNG00015004384)	DCAF15 (ENSMMNG00015004359)	RFX1 (ENSMMNG00015004291)	RLN3 (ENSMMNG00015004256)	IL27RA (ENSMMNG00015004231)	PALM3 (ENSMMNG00015004214)	ENSMMNG00015004199
Beluga whale	MODERN SPECIES	27	RTBDN (ENSDLEG00000010548)	MAST1 (ENSDLEG00000010566)	DNASE2 (ENSDLEG00000010624)	GCDH (ENSDLEG00000010654)	KLF1 (ENSDLEG00000010698)	SYCE2 (ENSDLEG00000010725)	FARSA (ENSDLEG00000010737)	CALR (ENSDLEG00000010762)	RAD23A (ENSDLEG00000010781)	GADD45GIP1 (ENSDLEG00000010807)	NFIX (ENSDLEG00000010831)	LYL1 (ENSDLEG00000010935)	TRMT1 (ENSDLEG00000010945)	NACC1 (ENSDLEG00000010956)	STX10 (ENSDLEG00000010977) #21	IER2 (ENSDLEG00000011026) #22	CACNA1A (ENSDLEG00000012308)	CCDC130 (ENSDLEG00000021849)	MRI1 (ENSDLEG00000021850)	CUNH19orf53 (ENSDLEG00000021851)	ZSWIM4 (ENSDLEG00000021852)	NANOS3 (ENSDLEG00000021858)	ENSDLEG00000021859	CC2D1A (ENSDLEG00000021860)	PODNL1 (ENSDLEG00000021861)	DCAF15 (ENSDLEG00000021862)	RFX1 (ENSDLEG00000021866)	IL27RA (ENSDLEG00000021870)	PALM3 (ENSDLEG00000021872)	ENSDLEG00000021874	C19orf67 (ENSDLEG00000021875)
Vaquita	MODERN SPECIES	14	RTBDN (ENSPSNG00000007000)	MAST1 (ENSPSNG00000006815)	DNASE2 (ENSPSNG00000006758)	KLF1 (ENSPSNG00000006733)	GCDH (ENSPSNG00000006697)	FARSA (ENSPSNG00000006551)	CALR (ENSPSNG00000006361)	RAD23A (ENSPSNG00000006274)	GADD45GIP1 (ENSPSNG00000006226)	ENSPSNG00000006174	NFIX (ENSPSNG00000005985)	LYL1 (ENSPSNG00000005801)	TRMT1 (ENSPSNG00000005699)	NACC1 (ENSPSNG00000005645)	STX10 (ENSPSNG00000005596) #21	IER2 (ENSPSNG00000005553) #22	CACNA1A (ENSPSNG00000003893)	YJU2B (ENSPSNG00000003221)	C19orf53 (ENSPSNG00000003199)	MRI1 (ENSPSNG00000003184)	ZSWIM4 (ENSPSNG00000003154)	NANOS3 (ENSPSNG00000003112)	ENSPSNG00000003101	CC2D1A (ENSPSNG00000002978)	PODNL1 (ENSPSNG00000002942)	DCAF15 (ENSPSNG00000002892)	RFX1 (ENSPSNG00000002816)	RLN3 (ENSPSNG00000002774)	IL27RA (ENSPSNG00000002738)	PALM3 (ENSPSNG00000002710)	MISP3 (ENSPSNG00000002687)
Blue whale	MODERN SPECIES	14	RTBDN (ENSBMSG00010005967)	MAST1 (ENSBMSG00010006004)	DNASE2 (ENSBMSG00010006057)	KLF1 (ENSBMSG00010006067)	GCDH (ENSBMSG00010006092)	ENSBMSG00010006111	FARSA (ENSBMSG00010006124)	ENSBMSG00010006144	RAD23A (ENSBMSG00010006168)	GADD45GIP1 (ENSBMSG00010006182)	NFIX (ENSBMSG00010006215)	LYL1 (ENSBMSG00010006239)	TRMT1 (ENSBMSG00010006254)	NACC1 (ENSBMSG00010006289)	STX10 (ENSBMSG00010006307) #21	IER2 (ENSBMSG00010006332) #22	CACNA1A (ENSBMSG00010007066)	YJU2B (ENSBMSG00010011086)	MRI1 (ENSBMSG00010011099)	C19orf53 (ENSBMSG00010011111)	ZSWIM4 (ENSBMSG00010011126)	NANOS3 (ENSBMSG00010011182)	ENSBMSG00010011193	CC2D1A (ENSBMSG00010011212)	PODNL1 (ENSBMSG00010011253)	DCAF15 (ENSBMSG00010011283)	RFX1 (ENSBMSG00010011328)	RLN3 (ENSBMSG00010011363)	IL27RA (ENSBMSG00010011379)	PALM3 (ENSBMSG00010011405)	ENSBMSG00010011429
Pecora	ANCESTRAL SPECIES		ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00390000010799.u.b.a.a.b	ENSGT00700000104610	ENSGT00390000009016
Yarkand deer	MODERN SPECIES	32	RNASEH2A (ENSCHYG00000019565)	RTBDN (ENSCHYG00000019447)	ENSCHYG00000019426	MAST1 (ENSCHYG00000019171)	DNASE2 (ENSCHYG00000019086)	KLF1 (ENSCHYG00000019002)	GCDH (ENSCHYG00000018661)	FARSA (ENSCHYG00000018361)	ENSCHYG00000017855	GADD45GIP1 (ENSCHYG00000017788)	NFIX (ENSCHYG00000016512)	LYL1 (ENSCHYG00000016421)	TRMT1 (ENSCHYG00000016033)	NACC1 (ENSCHYG00000015883)	STX10 (ENSCHYG00000015356) #21	IER2 (ENSCHYG00000015316) #22	CACNA1A (ENSCHYG00000009142)	YJU2B (ENSCHYG00000008722)	MRI1 (ENSCHYG00000008660)	C19orf53 (ENSCHYG00000008638)	ZSWIM4 (ENSCHYG00000008457)	NANOS3 (ENSCHYG00000008374)	ENSCHYG00000008348	CC2D1A (ENSCHYG00000008230)	PODNL1 (ENSCHYG00000008102)	DCAF15 (ENSCHYG00000007994)	RFX1 (ENSCHYG00000007922)	RLN3 (ENSCHYG00000007881)	ENSCHYG00000007859	PALM3 (ENSCHYG00000007837)	IL27RA (ENSCHYG00000007720)
Percora_a	ANCESTRAL SPECIES		ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00390000010799.u.b.a.a.b	ENSGT00700000104610	ENSGT00390000009016
Bovidae	ANCESTRAL SPECIES		ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00390000010799.u.b.a.a.b	ENSGT00700000104610	ENSGT00390000009016
Caprinae	ANCESTRAL SPECIES	3	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00390000010799.u.b.a.a.b	ENSGT00700000104610	ENSGT00390000009016
Rambouillet Sheep	MODERN SPECIES	21	RNASEH2A (ENSOARG00020011239)	RTBDN (ENSOARG00020011079)	MAST1 (ENSOARG00020010455)	DNASE2 (ENSOARG00020010363)	KLF1 (ENSOARG00020010329)	GCDH (ENSOARG00020010253)	FARSA (ENSOARG00020010040)	CALR (ENSOARG00020009931)	RAD23A (ENSOARG00020009840)	GADD45GIP1 (ENSOARG00020009801)	NFIX (ENSOARG00020008684)	LYL1 (ENSOARG00020008580)	TRMT1 (ENSOARG00020008381)	NACC1 (ENSOARG00020008294)	STX10 (ENSOARG00020008210) #21	IER2 (ENSOARG00020008180) #22	ENSOARG00020008152	CACNA1A (ENSOARG00020002091)	YJU2B (ENSOARG00020001677)	MRI1 (ENSOARG00020001665)	C19orf53 (ENSOARG00020001650)	ZSWIM4 (ENSOARG00020001605)	NANOS3 (ENSOARG00020001560)	ENSOARG00020001554	CC2D1A (ENSOARG00020001498)	PODNL1 (ENSOARG00020001475)	DCAF15 (ENSOARG00020001424)	RFX1 (ENSOARG00020001351)	ENSOARG00020001327	IL27RA (ENSOARG00020001311)	PALM3 (ENSOARG00020001298)
Goat	MODERN SPECIES	26	RTBDN (ENSCHIG00000018795)	MAST1 (ENSCHIG00000012078)	DNASE2 (ENSCHIG00000018237)	KLF1 (ENSCHIG00000024201)	GCDH (ENSCHIG00000008032)	SYCE2 (ENSCHIG00000023183)	FARSA (ENSCHIG00000022617)	CALR (ENSCHIG00000023446)	RAD23A (ENSCHIG00000017626)	GADD45GIP1 (ENSCHIG00000017823)	NFIX (ENSCHIG00000022384)	LYL1 (ENSCHIG00000027128)	TRMT1 (ENSCHIG00000013569)	NACC1 (ENSCHIG00000023771)	STX10 (ENSCHIG00000018262) #21	IER2 (ENSCHIG00000007994) #22	CACNA1A (ENSCHIG00000016788)	YJU2B (ENSCHIG00000013694)	MRI1 (ENSCHIG00000019343)	C19orf53 (ENSCHIG00000018093)	ZSWIM4 (ENSCHIG00000007749)	NANOS3 (ENSCHIG00000007837)	ENSCHIG00000014143	CC2D1A (ENSCHIG00000018476)	PODNL1 (ENSCHIG00000021297)	DCAF15 (ENSCHIG00000014809)	RFX1 (ENSCHIG00000025598)	RLN3 (ENSCHIG00000003595)	IL27RA (ENSCHIG00000014900)	PALM3 (ENSCHIG00000021116)	MISP3 (ENSCHIG00000009281)
Bovinae	ANCESTRAL SPECIES	2	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00390000010799.u.b.a.a.b	ENSGT00700000104610	ENSGT00390000009016
Bos	ANCESTRAL SPECIES	3	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.r	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.s	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Bos_b	ANCESTRAL SPECIES	2	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.r	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.s	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Hybrid Bos Indicus	MODERN SPECIES	26	RNASEH2A (ENSBIXG00005023406)	RTBDN (ENSBIXG00005007174)	MAST1 (ENSBIXG00005023334)	DNASE2 (ENSBIXG00005023267)	KLF1 (ENSBIXG00005006052)	GCDH (ENSBIXG00005006673)	ENSBIXG00005023188	FARSA (ENSBIXG00005023164)	CALR (ENSBIXG00005023092)	RAD23A (ENSBIXG00005023035)	GADD45GIP1 (ENSBIXG00005022995)	NACC1 (ENSBIXG00005003906)	LYL1 (ENSBIXG00005003796)	TRMT1 (ENSBIXG00005022272)	STX10 (ENSBIXG00005006889) #21	IER2 (ENSBIXG00005003732) #22	CACNA1A (ENSBIXG00005021956)	ENSBIXG00005007354	YJU2B (ENSBIXG00005021066)	MRI1 (ENSBIXG00005021041)	ENSBIXG00005007352	ZSWIM4 (ENSBIXG00005021000)	NANOS3 (ENSBIXG00005020898)	ENSBIXG00005020888	CC2D1A (ENSBIXG00005020848)	PODNL1 (ENSBIXG00005020725)	DCAF15 (ENSBIXG00005003473)	RFX1 (ENSBIXG00005003471)	RLN3 (ENSBIXG00005020471)	IL27RA (ENSBIXG00005020455)	PALM3 (ENSBIXG00005020377)
Cow	MODERN SPECIES	26	RTBDN (ENSBTAG00000006077)	MAST1 (ENSBTAG00000006080)	DNASE2 (ENSBTAG00000006082)	KLF1 (ENSBTAG00000006083)	GCDH (ENSBTAG00000016211)	SYCE2 (ENSBTAG00000016213)	FARSA (ENSBTAG00000021374)	CALR (ENSBTAG00000015114)	RAD23A (ENSBTAG00000015116)	GADD45GIP1 (ENSBTAG00000015117)	NFIX (ENSBTAG00000018229)	LYL1 (ENSBTAG00000019329)	TRMT1 (ENSBTAG00000019325)	NACC1 (ENSBTAG00000016350)	STX10 (ENSBTAG00000016352) #21	IER2 (ENSBTAG00000016354) #22	CACNA1A (ENSBTAG00000014828)	YJU2B (ENSBTAG00000002516)	MRI1 (ENSBTAG00000002524)	C7H19orf53 (ENSBTAG00000002525)	ZSWIM4 (ENSBTAG00000002527)	NANOS3 (ENSBTAG00000000399)	BRME1 (ENSBTAG00000006064)	CC2D1A (ENSBTAG00000006068)	PODNL1 (ENSBTAG00000006073)	DCAF15 (ENSBTAG00000008841)	RFX1 (ENSBTAG00000008854)	RLN3 (ENSBTAG00000038437)	IL27RA (ENSBTAG00000016933)	PALM3 (ENSBTAG00000046744)	MISP3 (ENSBTAG00000016936)
Bos_a	ANCESTRAL SPECIES	57	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.r	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.s	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Wild yak	MODERN SPECIES	1191	RTBDN (ENSBMUG00000014745)	MAST1 (ENSBMUG00000014789)	DNASE2 (ENSBMUG00000014821)	KLF1 (ENSBMUG00000014835)	GCDH (ENSBMUG00000014853)	SYCE2 (ENSBMUG00000014874)	FARSA (ENSBMUG00000014925)	CALR (ENSBMUG00000014947)	RAD23A (ENSBMUG00000014991)	GADD45GIP1 (ENSBMUG00000015011)	NFIX (ENSBMUG00000015081)	LYL1 (ENSBMUG00000015125)	TRMT1 (ENSBMUG00000015157)	NACC1 (ENSBMUG00000015196)	STX10 (ENSBMUG00000015238) #21	IER2 (ENSBMUG00000015268) #22	CACNA1A (ENSBMUG00000017000)	OR4E2 (ENSBMUG00000017584)	OR10G2 (ENSBMUG00000017604)	OR10G3 (ENSBMUG00000017624)	ENSBMUG00000017637	SALL2 (ENSBMUG00000017662)	METTL3 (ENSBMUG00000017682)	TOX4 (ENSBMUG00000017709)	RAB2B (ENSBMUG00000017773)	CHD8 (ENSBMUG00000018147)	SUPT16H (ENSBMUG00000018487)	RPGRIP1 (ENSBMUG00000018569)	ENSBMUG00000018692	TMEM253 (ENSBMUG00000018774)	ZNF219 (ENSBMUG00000018789)
Domestic yak	MODERN SPECIES	27	MAST1 (ENSBGRG00000006558)	DNASE2 (ENSBGRG00000006722)	KLF1 (ENSBGRG00000006745)	GCDH (ENSBGRG00000006775)	SYCE2 (ENSBGRG00000006880)	FARSA (ENSBGRG00000006949)	CALR (ENSBGRG00000007159)	RAD23A (ENSBGRG00000007230)	GADD45GIP1 (ENSBGRG00000007568)	NFIX (ENSBGRG00000007656)	LYL1 (ENSBGRG00000008585)	TRMT1 (ENSBGRG00000008629)	ENSBGRG00000008808	NACC1 (ENSBGRG00000008843)	STX10 (ENSBGRG00000008914) #21	IER2 (ENSBGRG00000009223) #22	CACNA1A (ENSBGRG00000009642)	YJU2B (ENSBGRG00000021535)	MRI1 (ENSBGRG00000021573)	C19orf53 (ENSBGRG00000021611)	ZSWIM4 (ENSBGRG00000021668)	NANOS3 (ENSBGRG00000021964)	ENSBGRG00000021979	CC2D1A (ENSBGRG00000022053)	PODNL1 (ENSBGRG00000022916)	DCAF15 (ENSBGRG00000023126)	RFX1 (ENSBGRG00000023159)	RLN3 (ENSBGRG00000023271)	IL27RA (ENSBGRG00000023291)	PALM3 (ENSBGRG00000023457)	MISP3 (ENSBGRG00000023479)
American bison	MODERN SPECIES	3279	RTBDN (ENSBBBG00000018793)	MAST1 (ENSBBBG00000018956)	DNASE2 (ENSBBBG00000018969)	KLF1 (ENSBBBG00000004825)	GCDH (ENSBBBG00000004838)	SYCE2 (ENSBBBG00000004849)	FARSA (ENSBBBG00000019049)	CALR (ENSBBBG00000004880)	RAD23A (ENSBBBG00000019119)	ENSBBBG00000008167	NFIX (ENSBBBG00000019204)	LYL1 (ENSBBBG00000019215)	TRMT1 (ENSBBBG00000019284)	NACC1 (ENSBBBG00000019295)	STX10 (ENSBBBG00000005006) #21	IER2 (ENSBBBG00000005013) #22	CACNA1A (ENSBBBG00000019380)	YJU2B (ENSBBBG00000005153)	MRI1 (ENSBBBG00000019433)	C19orf53 (ENSBBBG00000019446)	ZSWIM4 (ENSBBBG00000007955)	ENSBBBG00000019499	CC2D1A (ENSBBBG00000019553)	PODNL1 (ENSBBBG00000019637)	DCAF15 (ENSBBBG00000005189)	RFX1 (ENSBBBG00000005338)	RLN3 (ENSBBBG00000005169)	ENSBBBG00000019803	IL27RA (ENSBBBG00000005137)	PALM3 (ENSBBBG00000005373)	C19orf67 (ENSBBBG00000019858)
Siberian musk deer	MODERN SPECIES	34	RTBDN (ENSMMSG00000017054)	MAST1 (ENSMMSG00000017118)	DNASE2 (ENSMMSG00000017335)	KLF1 (ENSMMSG00000017358)	GCDH (ENSMMSG00000017382)	SYCE2 (ENSMMSG00000017412)	FARSA (ENSMMSG00000017435)	ENSMMSG00000017464	RAD23A (ENSMMSG00000017530)	GADD45GIP1 (ENSMMSG00000017735)	NFIX (ENSMMSG00000017773)	LYL1 (ENSMMSG00000017977)	TRMT1 (ENSMMSG00000018011)	NACC1 (ENSMMSG00000018197)	STX10 (ENSMMSG00000018243) #21	IER2 (ENSMMSG00000018376) #22	CACNA1A (ENSMMSG00000019062)	YJU2B (ENSMMSG00000024343)	MRI1 (ENSMMSG00000024345)	C19orf53 (ENSMMSG00000024346)	ZSWIM4 (ENSMMSG00000024347)	NANOS3 (ENSMMSG00000024352)	ENSMMSG00000024353	CC2D1A (ENSMMSG00000024357)	PODNL1 (ENSMMSG00000024362)	DCAF15 (ENSMMSG00000024364)	RFX1 (ENSMMSG00000024366)	RLN3 (ENSMMSG00000007549)	IL27RA (ENSMMSG00000007566)	PALM3 (ENSMMSG00000007601)	MISP3 (ENSMMSG00000007622)
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Primates	ANCESTRAL SPECIES	18	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01050000245449	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01050000245449	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01050000245449	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01050000245449	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.o.a.a.a	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Black snub-nosed monkey	MODERN SPECIES	1206	MAST1 (ENSRBIG00000036674)	ENSRBIG00000038978	KLF1 (ENSRBIG00000036232)	GCDH (ENSRBIG00000031343)	SYCE2 (ENSRBIG00000037872)	FARSA (ENSRBIG00000025585)	CALR (ENSRBIG00000038580)	RAD23A (ENSRBIG00000039630)	GADD45GIP1 (ENSRBIG00000028947)	DAND5 (ENSRBIG00000042172)	NFIX (ENSRBIG00000044362)	LYL1 (ENSRBIG00000000841)	TRMT1 (ENSRBIG00000038324)	NACC1 (ENSRBIG00000038786)	STX10 (ENSRBIG00000035960) #21	IER2 (ENSRBIG00000002280) #22	CACNA1A (ENSRBIG00000018638)
Golden snub-nosed monkey	MODERN SPECIES	975	MAST1 (ENSRROG00000042288)	DNASE2 (ENSRROG00000029927)	KLF1 (ENSRROG00000041432)	GCDH (ENSRROG00000044762)	SYCE2 (ENSRROG00000032909)	FARSA (ENSRROG00000040046)	CALR (ENSRROG00000044583)	RAD23A (ENSRROG00000040220)	GADD45GIP1 (ENSRROG00000032590)	DAND5 (ENSRROG00000032903)	NFIX (ENSRROG00000033828)	LYL1 (ENSRROG00000030934)	TRMT1 (ENSRROG00000028599)	NACC1 (ENSRROG00000040733)	STX10 (ENSRROG00000040598) #21	IER2 (ENSRROG00000024202) #22	CACNA1A (ENSRROG00000037736)	ENSRROG00000044068	YJU2B (ENSRROG00000039770)	MRI1 (ENSRROG00000031188)	ENSRROG00000032872	ZSWIM4 (ENSRROG00000032947)	NANOS3 (ENSRROG00000032642)	BRME1 (ENSRROG00000024917)	CC2D1A (ENSRROG00000043482)	PODNL1 (ENSRROG00000036501)	DCAF15 (ENSRROG00000033775)	RFX1 (ENSRROG00000038209)	RLN3 (ENSRROG00000032423)	IL27RA (ENSRROG00000036450)	PALM3 (ENSRROG00000032410)
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Vervet Monkey	MODERN SPECIES	25	MAST1 (ENSCSAG00000006558)	DNASE2 (ENSCSAG00000006550)	KLF1 (ENSCSAG00000006545)	GCDH (ENSCSAG00000006539)	SYCE2 (ENSCSAG00000006533)	FARSA (ENSCSAG00000006530)	CALR (ENSCSAG00000006527)	RAD23A (ENSCSAG00000006523)	GADD45GIP1 (ENSCSAG00000006518)	DAND5 (ENSCSAG00000006514)	NFIX (ENSCSAG00000006510)	LYL1 (ENSCSAG00000006504)	TRMT1 (ENSCSAG00000006500)	NACC1 (ENSCSAG00000006493)	STX10 (ENSCSAG00000006490) #21	IER2 (ENSCSAG00000018839) #22	CACNA1A (ENSCSAG00000006482)	YJU2B (ENSCSAG00000006473)	MRI1 (ENSCSAG00000006463)	C19orf53 (ENSCSAG00000006444)	ZSWIM4 (ENSCSAG00000006437)	NANOS3 (ENSCSAG00000006428)	BRME1 (ENSCSAG00000006425)	CC2D1A (ENSCSAG00000006407)	PODNL1 (ENSCSAG00000006396)	DCAF15 (ENSCSAG00000006394)	RLN3 (ENSCSAG00000006390)	IL27RA (ENSCSAG00000006388)	PALM3 (ENSCSAG00000006381)	MISP3 (ENSCSAG00000006375)	C19orf67 (ENSCSAG00000006372)
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01100000266868	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Macaca	ANCESTRAL SPECIES	21	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01100000266868	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Pig-tailed macaque	MODERN SPECIES	76	MAST1 (ENSMNEG00000038625)	DNASE2 (ENSMNEG00000038975)	KLF1 (ENSMNEG00000030783)	GCDH (ENSMNEG00000035137)	SYCE2 (ENSMNEG00000032767)	FARSA (ENSMNEG00000043866)	CALR (ENSMNEG00000034740)	RAD23A (ENSMNEG00000042153)	GADD45GIP1 (ENSMNEG00000033121)	DAND5 (ENSMNEG00000040891)	NFIX (ENSMNEG00000032823)	LYL1 (ENSMNEG00000013370)	TRMT1 (ENSMNEG00000037867)	NACC1 (ENSMNEG00000001897)	STX10 (ENSMNEG00000039402) #21	IER2 (ENSMNEG00000005809) #22	CACNA1A (ENSMNEG00000045532)	ENSMNEG00000032415	YJU2B (ENSMNEG00000032777)	MRI1 (ENSMNEG00000002628)	C19orf53 (ENSMNEG00000030499)	ZSWIM4 (ENSMNEG00000040630)	NANOS3 (ENSMNEG00000028898)	BRME1 (ENSMNEG00000042593)	CC2D1A (ENSMNEG00000044902)	PODNL1 (ENSMNEG00000029074)	DCAF15 (ENSMNEG00000031487)	RFX1 (ENSMNEG00000038388)	RLN3 (ENSMNEG00000008264)	IL27RA (ENSMNEG00000044658)	PALM3 (ENSMNEG00000039886)
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01100000266868	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Olive baboon	MODERN SPECIES	12	RTBDN (ENSPANG00000015629)	MAST1 (ENSPANG00000015630)	DNASE2 (ENSPANG00000049574)	KLF1 (ENSPANG00000033071)	GCDH (ENSPANG00000007728)	SYCE2 (ENSPANG00000001632)	FARSA (ENSPANG00000010978)	CALR (ENSPANG00000005597)	RAD23A (ENSPANG00000014671)	GADD45GIP1 (ENSPANG00000009045)	NFIX (ENSPANG00000018992)	LYL1 (ENSPANG00000014670)	TRMT1 (ENSPANG00000009247)	NACC1 (ENSPANG00000004447)	STX10 (ENSPANG00000012122) #21	IER2 (ENSPANG00000014006) #22	CACNA1A (ENSPANG00000009077)	ENSPANG00000044374	YJU2B (ENSPANG00000009961)	MRI1 (ENSPANG00000010977)	C19orf53 (ENSPANG00000038691)	ZSWIM4 (ENSPANG00000018289)	ENSPANG00000048009	NANOS3 (ENSPANG00000015037)	BRME1 (ENSPANG00000017976)	CC2D1A (ENSPANG00000019934)	PODNL1 (ENSPANG00000017712)	DCAF15 (ENSPANG00000011700)	RFX1 (ENSPANG00000009789)	ENSPANG00000005369	IL27RA (ENSPANG00000015627)
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01100000266868	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Drill	MODERN SPECIES	1150	DNASE2 (ENSMLEG00000042329)	KLF1 (ENSMLEG00000029486)	ENSMLEG00000022275	GCDH (ENSMLEG00000034975)	SYCE2 (ENSMLEG00000040081)	FARSA (ENSMLEG00000029157)	CALR (ENSMLEG00000043015)	RAD23A (ENSMLEG00000025874)	GADD45GIP1 (ENSMLEG00000026252)	DAND5 (ENSMLEG00000039027)	NFIX (ENSMLEG00000009460)	LYL1 (ENSMLEG00000040101)	TRMT1 (ENSMLEG00000016142)	NACC1 (ENSMLEG00000030829)	STX10 (ENSMLEG00000043432) #21	IER2 (ENSMLEG00000019860) #22	CACNA1A (ENSMLEG00000040228)
Sooty mangabey	MODERN SPECIES	347	MAST1 (ENSCATG00000034930)	DNASE2 (ENSCATG00000039766)	KLF1 (ENSCATG00000043665)	GCDH (ENSCATG00000027594)	SYCE2 (ENSCATG00000041610)	ENSCATG00000024201	CALR (ENSCATG00000033446)	RAD23A (ENSCATG00000004423)	GADD45GIP1 (ENSCATG00000030476)	DAND5 (ENSCATG00000043902)	NFIX (ENSCATG00000043066)	LYL1 (ENSCATG00000044487)	TRMT1 (ENSCATG00000039850)	NACC1 (ENSCATG00000035045)	STX10 (ENSCATG00000030837) #21	IER2 (ENSCATG00000021750) #22	CACNA1A (ENSCATG00000031790)	ENSCATG00000029680	YJU2B (ENSCATG00000031922)	MRI1 (ENSCATG00000029747)	C19orf53 (ENSCATG00000035863)	ZSWIM4 (ENSCATG00000024862)	NANOS3 (ENSCATG00000034885)	BRME1 (ENSCATG00000029619)	CC2D1A (ENSCATG00000040032)	PODNL1 (ENSCATG00000025145)	DCAF15 (ENSCATG00000041636)	RFX1 (ENSCATG00000041901)	RLN3 (ENSCATG00000040582)	IL27RA (ENSCATG00000041637)	PALM3 (ENSCATG00000044550)
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01050000245449	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Hominidae	ANCESTRAL SPECIES		ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01050000245449	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01050000245449	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01050000245449	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Pan	ANCESTRAL SPECIES	14	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00900000143204.b	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b.v.a	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01050000245449	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740.p	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Chimpanzee	MODERN SPECIES	10	DNASE2 (ENSPTRG00000010546)	KLF1 (ENSPTRG00000010547)	GCDH (ENSPTRG00000010548)	ENSPTRG00000050317	SYCE2 (ENSPTRG00000010549)	FARSA (ENSPTRG00000010550)	CALR (ENSPTRG00000010551)	RAD23A (ENSPTRG00000010552)	GADD45GIP1 (ENSPTRG00000010553)	DAND5 (ENSPTRG00000010554)	NFIX (ENSPTRG00000010555)	LYL1 (ENSPTRG00000049311)	TRMT1 (ENSPTRG00000010557)	NACC1 (ENSPTRG00000010558)	STX10 (ENSPTRG00000010559) #21	IER2 (ENSPTRG00000049474) #22	CACNA1A (ENSPTRG00000010561)	ENSPTRG00000047800	YJU2B (ENSPTRG00000010562)	MRI1 (ENSPTRG00000010563)	C19H19orf53 (ENSPTRG00000010565)	ZSWIM4 (ENSPTRG00000010567)	NANOS3 (ENSPTRG00000010568)	BRME1 (ENSPTRG00000010569)	CC2D1A (ENSPTRG00000010571)	PODNL1 (ENSPTRG00000010572)	DCAF15 (ENSPTRG00000010573)	RFX1 (ENSPTRG00000010574)	RLN3 (ENSPTRG00000010576)	IL27RA (ENSPTRG00000010578)	PALM3 (ENSPTRG00000010579)
Bonobo	MODERN SPECIES	10	MAST1 (ENSPPAG00000035621)	DNASE2 (ENSPPAG00000034169)	KLF1 (ENSPPAG00000039322)	GCDH (ENSPPAG00000026417)	ENSPPAG00000027273	SYCE2 (ENSPPAG00000028078)	FARSA (ENSPPAG00000034266)	CALR (ENSPPAG00000006666)	RAD23A (ENSPPAG00000016916)	GADD45GIP1 (ENSPPAG00000039356)	NFIX (ENSPPAG00000027719)	LYL1 (ENSPPAG00000028076)	ENSPPAG00000031484	NACC1 (ENSPPAG00000033614)	STX10 (ENSPPAG00000042146) #21	IER2 (ENSPPAG00000008761) #22	CACNA1A (ENSPPAG00000017516)	ENSPPAG00000033516	YJU2B (ENSPPAG00000028983)	MRI1 (ENSPPAG00000033346)	C19orf53 (ENSPPAG00000039375)	ZSWIM4 (ENSPPAG00000025698)	NANOS3 (ENSPPAG00000032168)	BRME1 (ENSPPAG00000041052)	ENSPPAG00000013237	PODNL1 (ENSPPAG00000017952)	DCAF15 (ENSPPAG00000042487)	RFX1 (ENSPPAG00000029817)	RLN3 (ENSPPAG00000022669)	IL27RA (ENSPPAG00000037229)	PALM3 (ENSPPAG00000039534)
Human	MODERN SPECIES	10	MAST1 (ENSG00000105613)	DNASE2 (ENSG00000105612)	KLF1 (ENSG00000105610)	GCDH (ENSG00000105607)	SYCE2 (ENSG00000161860)	FARSA (ENSG00000179115)	CALR (ENSG00000179218)	RAD23A (ENSG00000179262)	GADD45GIP1 (ENSG00000179271)	DAND5 (ENSG00000179284)	NFIX (ENSG00000008441)	LYL1 (ENSG00000104903)	TRMT1 (ENSG00000104907)	NACC1 (ENSG00000160877)	STX10 (ENSG00000104915) #21	IER2 (ENSG00000160888) #22	CACNA1A (ENSG00000141837)	YJU2B (ENSG00000104957)	MRI1 (ENSG00000037757)	C19orf53 (ENSG00000104979)	ZSWIM4 (ENSG00000132003)	NANOS3 (ENSG00000187556)	BRME1 (ENSG00000132016)	CC2D1A (ENSG00000132024)	PODNL1 (ENSG00000132000)	DCAF15 (ENSG00000132017)	RFX1 (ENSG00000132005)	RLN3 (ENSG00000171136)	IL27RA (ENSG00000104998)	PALM3 (ENSG00000187867)	MISP3 (ENSG00000141854)
Gorilla	MODERN SPECIES	10	MAST1 (ENSGGOG00000003390)	DNASE2 (ENSGGOG00000003402)	KLF1 (ENSGGOG00000003408)	GCDH (ENSGGOG00000003411)	ENSGGOG00000003416	FARSA (ENSGGOG00000003418)	CALR (ENSGGOG00000016129)	RAD23A (ENSGGOG00000023403)	GADD45GIP1 (ENSGGOG00000022807)	DAND5 (ENSGGOG00000009692)	NFIX (ENSGGOG00000001831)	LYL1 (ENSGGOG00000023512)	TRMT1 (ENSGGOG00000014007)	NACC1 (ENSGGOG00000022388)	STX10 (ENSGGOG00000009480) #21	IER2 (ENSGGOG00000043951) #22	ENSGGOG00000008660	ENSGGOG00000042836	YJU2B (ENSGGOG00000006623)	MRI1 (ENSGGOG00000006628)	C19orf53 (ENSGGOG00000027024)	ENSGGOG00000011452	NANOS3 (ENSGGOG00000000964)	BRME1 (ENSGGOG00000000965)	CC2D1A (ENSGGOG00000004396)	PODNL1 (ENSGGOG00000004407)	DCAF15 (ENSGGOG00000000384)	RFX1 (ENSGGOG00000000385)	RLN3 (ENSGGOG00000042442)	IL27RA (ENSGGOG00000011506)	PALM3 (ENSGGOG00000023236)
Orangutan	MODERN SPECIES	10	ENSPPYG00000009609	MAST1 (ENSPPYG00000009610)	DNASE2 (ENSPPYG00000009611)	KLF1 (ENSPPYG00000009612)	GCDH (ENSPPYG00000009613)	FARSA (ENSPPYG00000009615)	CALR (ENSPPYG00000009616)	RAD23A (ENSPPYG00000009617)	GADD45GIP1 (ENSPPYG00000038376)	DAND5 (ENSPPYG00000009619)	ENSPPYG00000009620	LYL1 (ENSPPYG00000009621)	TRMT1 (ENSPPYG00000009622)	NACC1 (ENSPPYG00000009623)	STX10 (ENSPPYG00000009624) #21	IER2 (ENSPPYG00000009625) #22	CACNA1A (ENSPPYG00000009626)	YJU2B (ENSPPYG00000010569)	MRI1 (ENSPPYG00000010570)	C19H19orf53 (ENSPPYG00000010571)	ZSWIM4 (ENSPPYG00000039708)	NANOS3 (ENSPPYG00000009627)	BRME1 (ENSPPYG00000009628)	CC2D1A (ENSPPYG00000009629)	PODNL1 (ENSPPYG00000030919)	DCAF15 (ENSPPYG00000009630)	RFX1 (ENSPPYG00000009631)	ENSPPYG00000009632	IL27RA (ENSPPYG00000009633)	PALM3 (ENSPPYG00000009634)	ENSPPYG00000009635
Gibbon	MODERN SPECIES		KLF1 (ENSNLEG00000012868)	ENSNLEG00000029024	GCDH (ENSNLEG00000012871)	ENSNLEG00000034095	FARSA (ENSNLEG00000012899)	ENSNLEG00000012957	CALR (ENSNLEG00000012958)	RAD23A (ENSNLEG00000012969)	GADD45GIP1 (ENSNLEG00000012973)	DAND5 (ENSNLEG00000012978)	NFIX (ENSNLEG00000012980)	LYL1 (ENSNLEG00000013010)	ENSNLEG00000013019	ENSNLEG00000028188	STX10 (ENSNLEG00000013030) #21	IER2 (ENSNLEG00000028353) #22	CACNA1A (ENSNLEG00000013041)	ENSNLEG00000035060	ENSNLEG00000013132	MRI1 (ENSNLEG00000013138)	C19orf53 (ENSNLEG00000013141)	ENSNLEG00000034372	NANOS3 (ENSNLEG00000034574)	BRME1 (ENSNLEG00000013152)	CC2D1A (ENSNLEG00000013167)	PODNL1 (ENSNLEG00000013191)	DCAF15 (ENSNLEG00000013221)	RFX1 (ENSNLEG00000013294)	IL27RA (ENSNLEG00000013354)	PALM3 (ENSNLEG00000013390)	ENSNLEG00000013397
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00940000157700	ENSGT00390000002634.a.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01050000245449	ENSGT00530000063615.b	ENSGT00390000013732.m	ENSGT00390000011740.o.a	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Cebidae	ANCESTRAL SPECIES	20	ENSGT00940000157700	ENSGT00390000002634.a.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT01050000245449	ENSGT00530000063615.b	ENSGT00390000013732.m	ENSGT00390000011740.o.a.c.a	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016
Marmoset	MODERN SPECIES	14	MAST1 (ENSCJAG00000004772)	DNASE2 (ENSCJAG00000004764)	KLF1 (ENSCJAG00000004762)	GCDH (ENSCJAG00000004741)	SYCE2 (ENSCJAG00000004733)	FARSA (ENSCJAG00000004686)	CALR (ENSCJAG00000004650)	ENSCJAG00000004494	GADD45GIP1 (ENSCJAG00000004645)	DAND5 (ENSCJAG00000004639)	NFIX (ENSCJAG00000004603)	LYL1 (ENSCJAG00000004598)	TRMT1 (ENSCJAG00000004566)	NACC1 (ENSCJAG00000043018)	STX10 (ENSCJAG00000004519) #21	IER2 (ENSCJAG00000045878) #22	CACNA1A (ENSCJAG00000004458)	YJU2B (ENSCJAG00000004443)	MRI1 (ENSCJAG00000044187)	ENSCJAG00000083863	ZSWIM4 (ENSCJAG00000004397)	NANOS3 (ENSCJAG00000004388)	ENSCJAG00000004372	CC2D1A (ENSCJAG00000004333)	PODNL1 (ENSCJAG00000004297)	DCAF15 (ENSCJAG00000005014)	RFX1 (ENSCJAG00000004970)	RLN3 (ENSCJAG00000004965)	IL27RA (ENSCJAG00000004940)	PALM3 (ENSCJAG00000004935)	MISP3 (ENSCJAG00000004926)
Strepsirrhini	ANCESTRAL SPECIES	28	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Bushbaby	MODERN SPECIES	242	RTBDN (ENSOGAG00000012219)	MAST1 (ENSOGAG00000012223)	DNASE2 (ENSOGAG00000034724)	KLF1 (ENSOGAG00000025438)	GCDH (ENSOGAG00000012240)	FARSA (ENSOGAG00000012243)	CALR (ENSOGAG00000012249)	RAD23A (ENSOGAG00000007693)	GADD45GIP1 (ENSOGAG00000028560)	DAND5 (ENSOGAG00000026803)	NFIX (ENSOGAG00000017133)	LYL1 (ENSOGAG00000033339)	TRMT1 (ENSOGAG00000025576)	NACC1 (ENSOGAG00000031864)	STX10 (ENSOGAG00000025310) #21	IER2 (ENSOGAG00000032686) #22	CACNA1A (ENSOGAG00000001691)	ENSOGAG00000033117	YJU2B (ENSOGAG00000001102)	MRI1 (ENSOGAG00000007183)	C19orf53 (ENSOGAG00000007185)	ZSWIM4 (ENSOGAG00000007186)	NANOS3 (ENSOGAG00000007190)	BRME1 (ENSOGAG00000027547)	CC2D1A (ENSOGAG00000007192)	PODNL1 (ENSOGAG00000007200)	DCAF15 (ENSOGAG00000026882)	RFX1 (ENSOGAG00000007203)	RLN3 (ENSOGAG00000002457)	IL27RA (ENSOGAG00000002458)	PALM3 (ENSOGAG00000031926)
Lemuriformes	ANCESTRAL SPECIES	35	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Lemuriformes_a	ANCESTRAL SPECIES	25	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Greater bamboo lemur	DUPLICATION
Greater bamboo lemur	MODERN SPECIES	1098	MAST1 (ENSPSMG00000004915)	DNASE2 (ENSPSMG00000004835)	KLF1 (ENSPSMG00000004830)	ENSPSMG00000004824	GCDH (ENSPSMG00000004781)	ENSPSMG00000004731	ENSPSMG00000004705	RAD23A (ENSPSMG00000004675)	GADD45GIP1 (ENSPSMG00000004634)	DAND5 (ENSPSMG00000004632)	NFIX (ENSPSMG00000004616)	LYL1 (ENSPSMG00000004557)	TRMT1 (ENSPSMG00000004538)	NACC1 (ENSPSMG00000004448)	STX10 (ENSPSMG00000004413) #21	IER2 (ENSPSMG00000004370) #22	CACNA1A (ENSPSMG00000002497)	ENSPSMG00000001179	YJU2B (ENSPSMG00000001159)	MRI1 (ENSPSMG00000001122)	C19orf53 (ENSPSMG00000001107)	ZSWIM4 (ENSPSMG00000001098)	NANOS3 (ENSPSMG00000001065)	BRME1 (ENSPSMG00000001047)	CC2D1A (ENSPSMG00000000896)	PODNL1 (ENSPSMG00000000734)	DCAF15 (ENSPSMG00000000694)	RFX1 (ENSPSMG00000000677)	RLN3 (ENSPSMG00000000667)	IL27RA (ENSPSMG00000000656)	PALM3 (ENSPSMG00000000637)
Greater bamboo lemur	MODERN SPECIES	1526															SS18L2 (ENSPSMG00000008364)	ENSPSMG00000008377 #22	NKTR (ENSPSMG00000008497)
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Glires	ANCESTRAL SPECIES	21	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Lagomorpha	ANCESTRAL SPECIES	335											ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22
Rabbit	MODERN SPECIES	1126													TRMT1 (ENSOCUG00000021934)	ENSOCUG00000038082	STX10 (ENSOCUG00000027932) #21	ENSOCUG00000026036 #22
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Rodentia_B	ANCESTRAL SPECIES	43	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Myomorpha	ANCESTRAL SPECIES	52	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Muroidea	ANCESTRAL SPECIES	60	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Murinae	ANCESTRAL SPECIES	15	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856.d	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Mus	ANCESTRAL SPECIES	6	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856.d	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00900000143265	ENSGT00950000183929	ENSGT00940000154396.b.a	ENSGT00700000104610
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856.d	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00900000143265	ENSGT00950000183929	ENSGT00940000154396.b.a	ENSGT00700000104610
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856.d	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00900000143265	ENSGT00950000183929	ENSGT00940000154396.b.a	ENSGT00700000104610
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000002634.a	ENSGT00940000161856.d	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00940000157455.z	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00900000143265	ENSGT00950000183929	ENSGT00940000154396.b.a	ENSGT00700000104610
Steppe mouse	MODERN SPECIES	2800	Dnase2a (ENSMSIG00000013905)	Klf1 (ENSMSIG00000013957)	Gcdh (ENSMSIG00000013969)	Syce2 (ENSMSIG00000013998)	Farsa (ENSMSIG00000014035)	ENSMSIG00000014114	ENSMSIG00000014123	Rad23a (ENSMSIG00000014128)	Gadd45gip1 (ENSMSIG00000014154)	Dand5 (ENSMSIG00000014166)	Nfix (ENSMSIG00000014176)	ENSMSIG00000014268	Lyl1 (ENSMSIG00000014285)	Trmt1 (ENSMSIG00000014300)	ENSMSIG00000014409	Ier2 (ENSMSIG00000014426) #22
spretus	MODERN SPECIES	17	Dnase2a (MGP_SPRETEiJ_G0032435)	Klf1 (MGP_SPRETEiJ_G0032434)	Gcdh (MGP_SPRETEiJ_G0032433)	Syce2 (MGP_SPRETEiJ_G0032432)	Farsa (MGP_SPRETEiJ_G0032431)	MGP_SPRETEiJ_G0032430	Calr (MGP_SPRETEiJ_G0032429)	Rad23a (MGP_SPRETEiJ_G0032428)	Gadd45gip1 (MGP_SPRETEiJ_G0032427)	Dand5 (MGP_SPRETEiJ_G0032426)	MGP_SPRETEiJ_G0032425	Lyl1 (MGP_SPRETEiJ_G0032424)	Nfix (MGP_SPRETEiJ_G0032423)	Trmt1 (MGP_SPRETEiJ_G0032422)	MGP_SPRETEiJ_G0032421	Ier2 (MGP_SPRETEiJ_G0032420) #22	Cacna1a (MGP_SPRETEiJ_G0032419)	Ccdc130 (MGP_SPRETEiJ_G0032418)	Mri1 (MGP_SPRETEiJ_G0032417)	D8Ertd738e (MGP_SPRETEiJ_G0032416)	Zswim4 (MGP_SPRETEiJ_G0032415)	Nanos3 (MGP_SPRETEiJ_G0032414)	Brme1 (MGP_SPRETEiJ_G0032413)	Cc2d1a (MGP_SPRETEiJ_G0032412)	Podnl1 (MGP_SPRETEiJ_G0032411)	Dcaf15 (MGP_SPRETEiJ_G0032410)	Rfx1 (MGP_SPRETEiJ_G0032409)	MGP_SPRETEiJ_G0032408	Gm10643 (MGP_SPRETEiJ_G0032407)	Rln3 (MGP_SPRETEiJ_G0032406)	Il27ra (MGP_SPRETEiJ_G0032405)
Mouse	MODERN SPECIES	17	Rtbdn (ENSMUSG00000048617)	Mast1 (ENSMUSG00000053693)	Dnase2a (ENSMUSG00000003812)	Klf1 (ENSMUSG00000054191)	Gcdh (ENSMUSG00000003809)	Syce2 (ENSMUSG00000003824)	Farsa (ENSMUSG00000003808)	Calr (ENSMUSG00000003814)	Rad23a (ENSMUSG00000003813)	Gadd45gip1 (ENSMUSG00000033751)	Dand5 (ENSMUSG00000053226)	Lyl1 (ENSMUSG00000034041)	Nfix (ENSMUSG00000001911)	Trmt1 (ENSMUSG00000001909)	Nacc1 (ENSMUSG00000001910)	Ier2 (ENSMUSG00000053560) #22	Cacna1a (ENSMUSG00000034656)	Ccdc130 (ENSMUSG00000004994)	Mri1 (ENSMUSG00000004996)	D8Ertd738e (ENSMUSG00000019362)	Zswim4 (ENSMUSG00000035671)	Nanos3 (ENSMUSG00000056155)	Brme1 (ENSMUSG00000008129)	Cc2d1a (ENSMUSG00000036686)	Podnl1 (ENSMUSG00000012889)	Dcaf15 (ENSMUSG00000037103)	Rfx1 (ENSMUSG00000031706)	Gm10643 (ENSMUSG00000074215)	Rln3 (ENSMUSG00000045232)	Il27ra (ENSMUSG00000005465)	Palm3 (ENSMUSG00000047986)
Ryukyu mouse	MODERN SPECIES	17	Mast1 (MGP_CAROLIEiJ_G0031317)	Dnase2a (MGP_CAROLIEiJ_G0031316)	Klf1 (MGP_CAROLIEiJ_G0031315)	Gcdh (MGP_CAROLIEiJ_G0031314)	Syce2 (MGP_CAROLIEiJ_G0031313)	Farsa (MGP_CAROLIEiJ_G0031312)	Calr (MGP_CAROLIEiJ_G0031311)	Rad23a (MGP_CAROLIEiJ_G0031310)	Gadd45gip1 (MGP_CAROLIEiJ_G0031309)	Dand5 (MGP_CAROLIEiJ_G0031308)	MGP_CAROLIEiJ_G0031307	Lyl1 (MGP_CAROLIEiJ_G0031306)	Nfix (MGP_CAROLIEiJ_G0031305)	Trmt1 (MGP_CAROLIEiJ_G0031304)	Nacc1 (MGP_CAROLIEiJ_G0031303)	Ier2 (MGP_CAROLIEiJ_G0031302) #22	Cacna1a (MGP_CAROLIEiJ_G0031301)	MGP_CAROLIEiJ_G0031300	Mri1 (MGP_CAROLIEiJ_G0031299)	D8Ertd738e (MGP_CAROLIEiJ_G0031298)	Zswim4 (MGP_CAROLIEiJ_G0031297)	Nanos3 (MGP_CAROLIEiJ_G0031296)	Brme1 (MGP_CAROLIEiJ_G0031295)	Cc2d1a (MGP_CAROLIEiJ_G0031294)	Podnl1 (MGP_CAROLIEiJ_G0031293)	Dcaf15 (MGP_CAROLIEiJ_G0031292)	Rfx1 (MGP_CAROLIEiJ_G0031291)	MGP_CAROLIEiJ_G0031290	MGP_CAROLIEiJ_G0031289	Rln3 (MGP_CAROLIEiJ_G0031288)	Il27ra (MGP_CAROLIEiJ_G0031287)
Shrew mouse	MODERN SPECIES	12	Rnaseh2a (MGP_PahariEiJ_G0022924)	MGP_PahariEiJ_G0022923	Mast1 (MGP_PahariEiJ_G0022922)	Dnase2a (MGP_PahariEiJ_G0022921)	Klf1 (MGP_PahariEiJ_G0022920)	Gcdh (MGP_PahariEiJ_G0022919)	Syce2 (MGP_PahariEiJ_G0022918)	Farsa (MGP_PahariEiJ_G0022917)	Calr (MGP_PahariEiJ_G0022916)	Rad23a (MGP_PahariEiJ_G0022915)	Gadd45gip1 (MGP_PahariEiJ_G0022914)	Dand5 (MGP_PahariEiJ_G0022913)	Nfix (MGP_PahariEiJ_G0022912)	Lyl1 (MGP_PahariEiJ_G0022911)	Nacc1 (MGP_PahariEiJ_G0022909)	Ier2 (MGP_PahariEiJ_G0022908) #22	Cacna1a (MGP_PahariEiJ_G0022907)	Ccdc130 (MGP_PahariEiJ_G0022906)	Mri1 (MGP_PahariEiJ_G0022905)	D8Ertd738e (MGP_PahariEiJ_G0022904)	Zswim4 (MGP_PahariEiJ_G0022903)	Nanos3 (MGP_PahariEiJ_G0022902)	Brme1 (MGP_PahariEiJ_G0022901)	Cc2d1a (MGP_PahariEiJ_G0022900)	Podnl1 (MGP_PahariEiJ_G0022899)	Dcaf15 (MGP_PahariEiJ_G0022898)	Rfx1 (MGP_PahariEiJ_G0022897)	MGP_PahariEiJ_G0022896	MGP_PahariEiJ_G0022895	Rln3 (MGP_PahariEiJ_G0022894)	Il27ra (MGP_PahariEiJ_G0022893)
Rat	MODERN SPECIES	10	Rnaseh2a (ENSRNOG00000068063)	Rtbdn (ENSRNOG00000043215)	MAST1 (ENSRNOG00000003469)	Dnase2 (ENSRNOG00000023830)	Klf1 (ENSRNOG00000003443)	Gcdh (ENSRNOG00000003307)	Farsa (ENSRNOG00000003149)	Calr (ENSRNOG00000003029)	Rad23a (ENSRNOG00000003026)	Gadd45gip1 (ENSRNOG00000003011)	Dand5 (ENSRNOG00000033368)	Nfix (ENSRNOG00000002983)	Lyl1 (ENSRNOG00000002950)	Trmt1 (ENSRNOG00000002914)	Nacc1 (ENSRNOG00000002864)	Ier2 (ENSRNOG00000067274) #22	Cacna1a (ENSRNOG00000052707)	Yju2b (ENSRNOG00000008319)	Mri1 (ENSRNOG00000026211)	LOC288913 (ENSRNOG00000049931)	Nanos3 (ENSRNOG00000031593)	Brme1 (ENSRNOG00000025796)	Cc2d1a (ENSRNOG00000006747)	Podnl1 (ENSRNOG00000006741)	Dcaf15 (ENSRNOG00000006551)	Rfx1 (ENSRNOG00000006049)	Rln3 (ENSRNOG00000005911)	Il27ra (ENSRNOG00000005747)	Il27ra (ENSRNOG00000005729)	Misp3 (ENSRNOG00000005619)	LOC686013 (ENSRNOG00000005533)
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Prairie vole	MODERN SPECIES	173											ENSMOCG00000000206	Nfix (ENSMOCG00000002641)	Lyl1 (ENSMOCG00000000199)	Trmt1 (ENSMOCG00000015895)	ENSMOCG00000018653	Ier2 (ENSMOCG00000001243) #22	Cacna1a (ENSMOCG00000014432)	ENSMOCG00000010484	ENSMOCG00000009861	Mri1 (ENSMOCG00000009591)	D8Ertd738e (ENSMOCG00000000560)	Zswim4 (ENSMOCG00000013310)	Nanos3 (ENSMOCG00000000059)	Brme1 (ENSMOCG00000019462)	Cc2d1a (ENSMOCG00000009561)	Podnl1 (ENSMOCG00000019920)	ENSMOCG00000019700	Dcaf15 (ENSMOCG00000017126)	Rfx1 (ENSMOCG00000009461)	Rln3 (ENSMOCG00000011994)	Il27ra (ENSMOCG00000015066)
Northern American deer mouse	MODERN SPECIES	18	Dnase2a (ENSPEMG00000000677)	Klf1 (ENSPEMG00000017635)	Gcdh (ENSPEMG00000009103)	Syce2 (ENSPEMG00000016357)	Farsa (ENSPEMG00000012560)	Calr (ENSPEMG00000001949)	Rad23a (ENSPEMG00000006140)	Gadd45gip1 (ENSPEMG00000011904)	Dand5 (ENSPEMG00000017061)	Nfix (ENSPEMG00000011765)	ENSPEMG00000029305	Lyl1 (ENSPEMG00000026641)	Trmt1 (ENSPEMG00000016247)	Nacc1 (ENSPEMG00000003314)	ENSPEMG00000028317	Ier2 (ENSPEMG00000005842) #22	ENSPEMG00000030103	ENSPEMG00000031086	Ccdc130 (ENSPEMG00000013906)	Mri1 (ENSPEMG00000006105)	D8Ertd738e (ENSPEMG00000027807)	Zswim4 (ENSPEMG00000009048)	Nanos3 (ENSPEMG00000030151)	Brme1 (ENSPEMG00000000718)	Podnl1 (ENSPEMG00000018883)	Dcaf15 (ENSPEMG00000012514)	Rfx1 (ENSPEMG00000014245)	Rln3 (ENSPEMG00000005926)	Il27ra (ENSPEMG00000011917)	Palm3 (ENSPEMG00000000570)	Misp3 (ENSPEMG00000017574)
Cricetinae	ANCESTRAL SPECIES	40	ENSGT00390000010768	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Chinese hamster chok1gshd	MODERN SPECIES	347	Rnaseh2a (ENSCGRG00001005021)	Mast1 (ENSCGRG00001012818)	Dnase2a (ENSCGRG00001011489)	Klf1 (ENSCGRG00001011893)	Gcdh (ENSCGRG00001012582)	Syce2 (ENSCGRG00001013520)	Farsa (ENSCGRG00001019769)	Calr (ENSCGRG00001020181)	Rad23a (ENSCGRG00001020853)	Gadd45gip1 (ENSCGRG00001000298)	Dand5 (ENSCGRG00001000588)	Nfix (ENSCGRG00001013186)	Lyl1 (ENSCGRG00001020161)	Trmt1 (ENSCGRG00001022594)	Nacc1 (ENSCGRG00001016498)	Ier2 (ENSCGRG00001015864) #22	Cacna1a (ENSCGRG00001015728)	Ccdc130 (ENSCGRG00001021573)	MRI1 (ENSCGRG00001015655)	D8Ertd738e (ENSCGRG00001019898)	Zswim4 (ENSCGRG00001022171)	Nanos3 (ENSCGRG00001023851)	Brme1 (ENSCGRG00001007024)	Cc2d1a (ENSCGRG00001014304)	Podnl1 (ENSCGRG00001020503)	Dcaf15 (ENSCGRG00001023898)	Rfx1 (ENSCGRG00001011068)	Rln3 (ENSCGRG00001018325)	Il27ra (ENSCGRG00001019895)	Palm3 (ENSCGRG00001015020)	Misp3 (ENSCGRG00001015443)
Lesser Egyptian jerboa	MODERN SPECIES	234	Rnaseh2a (ENSJJAG00000017547)	ENSJJAG00000019577	ENSJJAG00000020016	Dnase2a (ENSJJAG00000000087)	Klf1 (ENSJJAG00000004209)	Gcdh (ENSJJAG00000018993)	Syce2 (ENSJJAG00000021380)	Calr (ENSJJAG00000000115)	Rad23a (ENSJJAG00000000606)	Dand5 (ENSJJAG00000011222)	Nfix (ENSJJAG00000012047)	Lyl1 (ENSJJAG00000015977)	Trmt1 (ENSJJAG00000017154)	Nacc1 (ENSJJAG00000000199)	ENSJJAG00000012119 #21	Ier2 (ENSJJAG00000015305) #22	Cacna1a (ENSJJAG00000020086)	ENSJJAG00000015193	Mri1 (ENSJJAG00000018104)	D8Ertd738e (ENSJJAG00000019133)	Zswim4 (ENSJJAG00000019795)	Nanos3 (ENSJJAG00000000545)	Cc2d1a (ENSJJAG00000011117)	Podnl1 (ENSJJAG00000019479)	Dcaf15 (ENSJJAG00000020594)	Rfx1 (ENSJJAG00000007901)	Rln3 (ENSJJAG00000016021)	Il27ra (ENSJJAG00000016724)	ENSJJAG00000019152	Misp3 (ENSJJAG00000019250)	1700067K01Rik (ENSJJAG00000019559)
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Hystricomorpha	ANCESTRAL SPECIES	55	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a.l	ENSGT00950000182915.b.b.a.a.k.b	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000185200	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a.l	ENSGT00950000182915.b.b.a.a.k.b	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a.l	ENSGT00950000182915.b.b.a.a.k.b	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Long-tailed chinchilla	MODERN SPECIES	122	RTBDN (ENSCLAG00000014391)	MAST1 (ENSCLAG00000012224)	DNASE2 (ENSCLAG00000012983)	KLF1 (ENSCLAG00000013218)	GCDH (ENSCLAG00000015590)	SYCE2 (ENSCLAG00000014420)	FARSA (ENSCLAG00000015489)	CALR (ENSCLAG00000012923)	RAD23A (ENSCLAG00000016638)	GADD45GIP1 (ENSCLAG00000015799)	DAND5 (ENSCLAG00000011402)	NFIX (ENSCLAG00000013479)	LYL1 (ENSCLAG00000014483)	TRMT1 (ENSCLAG00000015295)	NACC1 (ENSCLAG00000016122)	IER2 (ENSCLAG00000015309) #22	CACNA1A (ENSCLAG00000013282)	YJU2B (ENSCLAG00000011790)	MRI1 (ENSCLAG00000013025)	C19orf53 (ENSCLAG00000011489)	ZSWIM4 (ENSCLAG00000011642)	NANOS3 (ENSCLAG00000015139)	ENSCLAG00000015002	CC2D1A (ENSCLAG00000012998)	PODNL1 (ENSCLAG00000013361)	DCAF15 (ENSCLAG00000015146)	RFX1 (ENSCLAG00000013348)	RLN3 (ENSCLAG00000013074)	IL27RA (ENSCLAG00000013752)	PALM3 (ENSCLAG00000016217)	C19orf67 (ENSCLAG00000014973)
Degu	MODERN SPECIES	114	ENSODEG00000011144	DNASE2 (ENSODEG00000009845)	KLF1 (ENSODEG00000009692)	GCDH (ENSODEG00000010247)	ENSODEG00000010928	FARSA (ENSODEG00000010433)	CALR (ENSODEG00000010711)	RAD23A (ENSODEG00000011287)	GADD45GIP1 (ENSODEG00000010728)	ENSODEG00000010129	NFIX (ENSODEG00000010171)	LYL1 (ENSODEG00000010992)	TRMT1 (ENSODEG00000010323)	ENSODEG00000019786	NACC1 (ENSODEG00000009255)	IER2 (ENSODEG00000013532) #22	CACNA1A (ENSODEG00000009256)	YJU2B (ENSODEG00000009976)	ENSODEG00000010083	C19orf53 (ENSODEG00000009270)	ZSWIM4 (ENSODEG00000009901)	NANOS3 (ENSODEG00000008907)	CC2D1A (ENSODEG00000009306)	PODNL1 (ENSODEG00000009051)	ENSODEG00000011425	DCAF15 (ENSODEG00000010421)	RFX1 (ENSODEG00000011025)	RLN3 (ENSODEG00000009268)	IL27RA (ENSODEG00000009893)	PALM3 (ENSODEG00000008820)	MISP3 (ENSODEG00000009732)
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000043972	DNASE2 (ENSHGLG00000016378)	KLF1 (ENSHGLG00000015876)	GCDH (ENSHGLG00000006522)	ENSHGLG00000046129	ENSHGLG00000043005	CALR (ENSHGLG00000009088)	RAD23A (ENSHGLG00000044031)	ENSHGLG00000005609	DAND5 (ENSHGLG00000040694)	ENSHGLG00000045273	NFIX (ENSHGLG00000010071)	LYL1 (ENSHGLG00000046929)	NACC1 (ENSHGLG00000008369)	ENSHGLG00000050447	IER2 (ENSHGLG00000050933) #22	YJU2B (ENSHGLG00000008180)	MRI1 (ENSHGLG00000010969)	C19orf53 (ENSHGLG00000035084)	ZSWIM4 (ENSHGLG00000019264)	NANOS3 (ENSHGLG00000019378)	ENSHGLG00000003199	PODNL1 (ENSHGLG00000008104)	DCAF15 (ENSHGLG00000010729)	RFX1 (ENSHGLG00000013500)	RLN3 (ENSHGLG00000006860)	IL27RA (ENSHGLG00000008513)	ENSHGLG00000038000	MISP3 (ENSHGLG00000004102)	C19orf67 (ENSHGLG00000004595)	ENSHGLG00000041868
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Eurasian red squirrel	MODERN SPECIES	7	MAST1 (ENSSVLG00005017111)	DNASE2 (ENSSVLG00005017585)	KLF1 (ENSSVLG00005017619)	GCDH (ENSSVLG00005017674)	ENSSVLG00005017827	FARSA (ENSSVLG00005017880)	CALR (ENSSVLG00005017951)	RAD23A (ENSSVLG00005018009)	GADD45GIP1 (ENSSVLG00005018098)	DAND5 (ENSSVLG00005018136)	NFIX (ENSSVLG00005018211)	LYL1 (ENSSVLG00005018485)	TRMT1 (ENSSVLG00005018534)	NACC1 (ENSSVLG00005018614)	STX10 (ENSSVLG00005018658) #21	IER2 (ENSSVLG00005018745) #22	CACNA1A (ENSSVLG00005020388)	ENSSVLG00005024893	ENSSVLG00005024924	ENSSVLG00005024939	ENSSVLG00005024956	YJU2B (ENSSVLG00005024977)	MRI1 (ENSSVLG00005025000)	C19orf53 (ENSSVLG00005025010)	ZSWIM4 (ENSSVLG00005025031)	NANOS3 (ENSSVLG00005025060)	ENSSVLG00005025075	PODNL1 (ENSSVLG00005025116)	DCAF15 (ENSSVLG00005025150)	RFX1 (ENSSVLG00005025184)	RLN3 (ENSSVLG00005025204)
Marmotini	ANCESTRAL SPECIES	41	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Marmotini_b	ANCESTRAL SPECIES	40	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Arctic ground squirrel	MODERN SPECIES	217	DNASE2 (ENSUPAG00010008053)	KLF1 (ENSUPAG00010008092)	GCDH (ENSUPAG00010008102)	SYCE2 (ENSUPAG00010008135)	FARSA (ENSUPAG00010008158)	CALR (ENSUPAG00010008184)	RAD23A (ENSUPAG00010008197)	GADD45GIP1 (ENSUPAG00010008222)	DAND5 (ENSUPAG00010008227)	NFIX (ENSUPAG00010008230)	ENSUPAG00010008329	LYL1 (ENSUPAG00010008333)	TRMT1 (ENSUPAG00010008343)	NACC1 (ENSUPAG00010008354)	STX10 (ENSUPAG00010008362) #21	IER2 (ENSUPAG00010008375) #22	CACNA1A (ENSUPAG00010008388)	YJU2B (ENSUPAG00010011639)	MRI1 (ENSUPAG00010011651)	C19orf53 (ENSUPAG00010011656)	ZSWIM4 (ENSUPAG00010011666)	NANOS3 (ENSUPAG00010011697)	BRME1 (ENSUPAG00010011699)	CC2D1A (ENSUPAG00010011706)	PODNL1 (ENSUPAG00010011723)	DCAF15 (ENSUPAG00010011735)	RFX1 (ENSUPAG00010011748)	RLN3 (ENSUPAG00010011794)	IL27RA (ENSUPAG00010011800)	PALM3 (ENSUPAG00010011814)	MISP3 (ENSUPAG00010011828)
Squirrel	MODERN SPECIES	259	MAST1 (ENSSTOG00000008668)	DNASE2 (ENSSTOG00000008712)	KLF1 (ENSSTOG00000021956)	GCDH (ENSSTOG00000008724)	SYCE2 (ENSSTOG00000008737)	FARSA (ENSSTOG00000008748)	CALR (ENSSTOG00000008774)	RAD23A (ENSSTOG00000024117)	GADD45GIP1 (ENSSTOG00000016419)	DAND5 (ENSSTOG00000016420)	NFIX (ENSSTOG00000007848)	LYL1 (ENSSTOG00000028401)	TRMT1 (ENSSTOG00000012531)	NACC1 (ENSSTOG00000007865)	STX10 (ENSSTOG00000007880) #21	IER2 (ENSSTOG00000007900) #22	CACNA1A (ENSSTOG00000024862)	YJU2B (ENSSTOG00000006281)	MRI1 (ENSSTOG00000020750)	C19orf53 (ENSSTOG00000011602)	ZSWIM4 (ENSSTOG00000021055)	NANOS3 (ENSSTOG00000024797)	BRME1 (ENSSTOG00000028732)	CC2D1A (ENSSTOG00000019980)	PODNL1 (ENSSTOG00000021014)	DCAF15 (ENSSTOG00000024329)	RFX1 (ENSSTOG00000025432)	RLN3 (ENSSTOG00000024302)	IL27RA (ENSSTOG00000008690)	PALM3 (ENSSTOG00000023133)	C19orf67 (ENSSTOG00000001321)
Alpin marmot	MODERN SPECIES	24	MAST1 (ENSMMMG00000020911)	DNASE2 (ENSMMMG00000020947)	KLF1 (ENSMMMG00000020960)	GCDH (ENSMMMG00000020963)	SYCE2 (ENSMMMG00000020981)	FARSA (ENSMMMG00000020996)	CALR (ENSMMMG00000021010)	ENSMMMG00000021016	GADD45GIP1 (ENSMMMG00000021032)	DAND5 (ENSMMMG00000021038)	NFIX (ENSMMMG00000021044)	LYL1 (ENSMMMG00000021069)	TRMT1 (ENSMMMG00000021080)	NACC1 (ENSMMMG00000021510)	STX10 (ENSMMMG00000021518) #21	ENSMMMG00000021534 #22	YJU2B (ENSMMMG00000021549)	ENSMMMG00000021583	ZSWIM4 (ENSMMMG00000021589)	NANOS3 (ENSMMMG00000021601)	ENSMMMG00000021612	PODNL1 (ENSMMMG00000021701)	DCAF15 (ENSMMMG00000021706)	RFX1 (ENSMMMG00000021740)	RLN3 (ENSMMMG00000021867)	IL27RA (ENSMMMG00000021869)	C19orf67 (ENSMMMG00000021884)	ENSMMMG00000021895	PRKACA (ENSMMMG00000021903)	ASF1B (ENSMMMG00000021930)	ADGRL1 (ENSMMMG00000021934)
Atlantogenata	ANCESTRAL SPECIES	41	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916
Afrotheria	ANCESTRAL SPECIES	38	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000009916
Tenrec	MODERN SPECIES	5187														NACC1 (ENSETEG00000003972)	ENSETEG00000003975 #21	IER2 (ENSETEG00000003980) #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856.b	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT00940000154739.A
Tasmanian devil	MODERN SPECIES		PRDX2 (ENSSHAG00000015596)	RNASEH2A (ENSSHAG00000021970)	ENSSHAG00000029919	MAST1 (ENSSHAG00000015366)	ENSSHAG00000027697	GCDH (ENSSHAG00000015183)	ENSSHAG00000015176	FARSA (ENSSHAG00000015006)	CALR (ENSSHAG00000022448)	RAD23A (ENSSHAG00000014944)	GADD45GIP1 (ENSSHAG00000030763)	ENSSHAG00000031388	NFIX (ENSSHAG00000014449)	ENSSHAG00000030868	TRMT1 (ENSSHAG00000014381)	IER2 (ENSSHAG00000022046) #22	CACNA1A (ENSSHAG00000013591)	ENSSHAG00000031108	YJU2B (ENSSHAG00000011586)	MRI1 (ENSSHAG00000011531)	C19orf53 (ENSSHAG00000027685)	ZSWIM4 (ENSSHAG00000011275)	ENSSHAG00000026160	ENSSHAG00000021049	CC2D1A (ENSSHAG00000010380)	PODNL1 (ENSSHAG00000010334)	DCAF15 (ENSSHAG00000010157)	RFX1 (ENSSHAG00000009998)	ENSSHAG00000025486	ENSSHAG00000009701	ENSSHAG00000009514
Diprotodontia	ANCESTRAL SPECIES	20	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856.b	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT01050000246822
Diprotodontia_a	ANCESTRAL SPECIES	16	ENSGT00950000183144.B	ENSGT00940000157700	ENSGT00390000002634.a	ENSGT00940000161856.b	ENSGT00940000158116	ENSGT00390000004872	ENSGT00390000006387	ENSGT00950000182915.b.b.a.a	ENSGT00390000012078.a.b	ENSGT00390000013719	ENSGT00530000063926.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00940000162404	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00900000141021.b.b #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000016855	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00700000104610	ENSGT00390000009016	ENSGT01050000246822
koala	MODERN SPECIES	58	ENSPCIG00000014111	MAST1 (ENSPCIG00000014093)	DNASE2 (ENSPCIG00000014087)	ENSPCIG00000014086	GCDH (ENSPCIG00000019299)	ENSPCIG00000019297	FARSA (ENSPCIG00000019294)	CALR (ENSPCIG00000019290)	RAD23A (ENSPCIG00000019286)	ENSPCIG00000019285	ENSPCIG00000033702	NFIX (ENSPCIG00000019280)	LYL1 (ENSPCIG00000019276)	TRMT1 (ENSPCIG00000019273)	NACC1 (ENSPCIG00000019270)	IER2 (ENSPCIG00000019269) #22	CACNA1A (ENSPCIG00000019267)	ENSPCIG00000019264	YJU2B (ENSPCIG00000019033)	MRI1 (ENSPCIG00000019032)	C19orf53 (ENSPCIG00000019031)	ZSWIM4 (ENSPCIG00000019028)	ENSPCIG00000033468	ENSPCIG00000018374	CC2D1A (ENSPCIG00000029766)	PODNL1 (ENSPCIG00000029767)	DCAF15 (ENSPCIG00000029768)	RFX1 (ENSPCIG00000029769)	RLN3 (ENSPCIG00000005101)	ENSPCIG00000029770	ENSPCIG00000029772
Opossum	MODERN SPECIES	2	ENSMODG00000028680	monDomV1R1220 (ENSMODG00000039528)	monDomV1R1219 (ENSMODG00000047743)	DNASE2 (ENSMODG00000011483)	KLF1 (ENSMODG00000011491)	GCDH (ENSMODG00000011508)	ENSMODG00000043191	FARSA (ENSMODG00000011519)	CALR (ENSMODG00000011530)	RAD23A (ENSMODG00000011539)	GADD45GIP1 (ENSMODG00000011545)	NFIX (ENSMODG00000011587)	ENSMODG00000011593	TRMT1 (ENSMODG00000011619)	ENSMODG00000011626	IER2 (ENSMODG00000023954) #22	CACNA1A (ENSMODG00000011749)	ENSMODG00000011755	YJU2B (ENSMODG00000011863)	MRI1 (ENSMODG00000011870)	C19orf53 (ENSMODG00000011876)	ZSWIM4 (ENSMODG00000011902)	ENSMODG00000023964	ENSMODG00000050577	CC2D1A (ENSMODG00000011949)	PODNL1 (ENSMODG00000011977)	ENSMODG00000012004	RFX1 (ENSMODG00000012044)	RLN3 (ENSMODG00000038451)	ENSMODG00000012066	ENSMODG00000041791
Platypus	MODERN SPECIES	85	BEST2 (ENSOANG00000045815)	HOOK2 (ENSOANG00000014251)	JUNB (ENSOANG00000007596)	PRDX2 (ENSOANG00000009080)	ENSOANG00000009787	ENSOANG00000007093	ENSOANG00000047645	GCDH (ENSOANG00000009077)	FARSA (ENSOANG00000043112)	CALR (ENSOANG00000009799)	RAD23A (ENSOANG00000040687)	GADD45GIP1 (ENSOANG00000045483)	NFIX (ENSOANG00000047105)	LYL1 (ENSOANG00000006846)	NACC1 (ENSOANG00000006845)	IER2 (ENSOANG00000041821) #22	CACNA1A (ENSOANG00000012652)	ENSOANG00000040676	YJU2B (ENSOANG00000001226)	MRI1 (ENSOANG00000012399)	ENSOANG00000047359	ZSWIM4 (ENSOANG00000005337)	MYDGF (ENSOANG00000041957)	TNFAIP8L1 (ENSOANG00000007043)	SEMA6B (ENSOANG00000045870)	ENSOANG00000013709	ENSOANG00000013710	HDGFL2 (ENSOANG00000040438)	UBXN6 (ENSOANG00000002985)	CHAF1A (ENSOANG00000030964)	ENSOANG00000046062
Sauria	DUPLICATION
Sauria	DUPLICATION
Sauria	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.a #22
Archelosauria	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.a #22
Cryptodira	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.a #22
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.a #22
Emydidae	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.a #22
Three-toed box turtle	MODERN SPECIES	2180																ENSTMTG00000019011 #22
Lepidosauria	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.a #22
Episquamata	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.a #22
Toxicofera	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.a #22
Elapidae	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.a #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.a #22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.a #22
Mainland tiger snake	MODERN SPECIES	156												ENSNSUG00000010612	ENSNSUG00000010594	ENSNSUG00000010591	ENSNSUG00000010590 #21	ENSNSUG00000010589 #22	ENSNSUG00000010587	ENSNSUG00000010585	ENSNSUG00000010583	ENSNSUG00000010582	ENSNSUG00000010454	ENSNSUG00000010452	ENSNSUG00000010450	ENSNSUG00000010447	ENSNSUG00000010433	ENSNSUG00000010430	ENSNSUG00000010429	ENSNSUG00000010428	ENSNSUG00000010425	ENSNSUG00000010424	ENSNSUG00000010423
Sauria	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.b #22
Lepidosauria	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.b #22
Episquamata	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.b #22
Toxicofera	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.b #22
Lizard	MODERN SPECIES	900						ENSACAG00000005001	ENSACAG00000029450	ENSACAG00000041093	ENSACAG00000034630	ENSACAG00000004786	ENSACAG00000045263	ENSACAG00000003913	TRMT1 (ENSACAG00000003825)	NACC1 (ENSACAG00000003808)	STX10 (ENSACAG00000003807) #21	IER2 (ENSACAG00000041275) #22	WDR83OS (ENSACAG00000003794)	WDR83 (ENSACAG00000003772)	FBXW9 (ENSACAG00000003732)	TNPO2 (ENSACAG00000003576)	ENSACAG00000003560	TRIR (ENSACAG00000003556)	GET3 (ENSACAG00000025550)	BEST2 (ENSACAG00000003499)	HOOK2 (ENSACAG00000003428)	JUNB (ENSACAG00000022758)	PRDX2 (ENSACAG00000003382)	RNASEH2A (ENSACAG00000003338)	ENSACAG00000013645	ENSACAG00000034730	ENSACAG00000041562
Elapidae	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.b #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.b #22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.b #22
Mainland tiger snake	MODERN SPECIES	158												ENSNSUG00000003677	ENSNSUG00000003450	ENSNSUG00000003446	ENSNSUG00000003439 #21	ENSNSUG00000003436 #22	ENSNSUG00000003435	ENSNSUG00000003420	ENSNSUG00000003415	ENSNSUG00000003413	ENSNSUG00000003178	TRIR (ENSNSUG00000003175)	ENSNSUG00000003170	ENSNSUG00000003169	ENSNSUG00000002659	ENSNSUG00000002652	ENSNSUG00000002651	ENSNSUG00000002649	ENSNSUG00000002647	ENSNSUG00000002641	ENSNSUG00000002637
Archelosauria	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.b #22
Cryptodira	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.b #22
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.b #22
Emydidae	ANCESTRAL SPECIES																	ENSGT00900000141021.b.b.c.b #22
Three-toed box turtle	MODERN SPECIES	1244																ENSTMTG00000010409 #22
Sauria	ANCESTRAL SPECIES	22	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000005830	ENSGT00390000014585
Lepidosauria	ANCESTRAL SPECIES	81	ENSGT00940000154739.A	ENSGT00940000154396.b.a	ENSGT01050000244879.a.b	ENSGT00390000011987	ENSGT00940000162059	ENSGT00390000009595.b	ENSGT00950000183135.A.b	ENSGT00940000162102	ENSGT00390000011740	ENSGT00530000063615.b	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00390000002121	ENSGT00940000159016	ENSGT00390000008063	ENSGT01050000246697	ENSGT00940000156708.a.a	ENSGT00940000163721	ENSGT00390000012267	ENSGT00390000003817
Episquamata	ANCESTRAL SPECIES	4	ENSGT00390000004692.d.a	ENSGT00940000163111.a.b.a	ENSGT00530000063936.a	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT01030000236111	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00940000153846.a.b	ENSGT00940000164508	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00390000002121	ENSGT00940000159016	ENSGT00390000006806	ENSGT00940000156708.a.a	ENSGT00940000163721	ENSGT00390000012267	ENSGT00390000003817	ENSGT00940000161361	ENSGT00940000160152	ENSGT00940000161195	ENSGT00940000155828	ENSGT00390000010768	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139
Laterata	ANCESTRAL SPECIES	1	ENSGT00390000004692.d.a	ENSGT00940000163111.a.b.a	ENSGT00530000063936.a	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT01030000236111	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00940000153846.a.b	ENSGT00940000164508	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00390000002121	ENSGT00940000159016	ENSGT00390000006806	ENSGT00940000156708.a.a	ENSGT00940000163721	ENSGT00390000012267	ENSGT00390000003817	ENSGT00940000161361	ENSGT00940000160152	ENSGT00940000161195	ENSGT00940000155828	ENSGT00390000010768	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139
Common wall lizard	MODERN SPECIES	10	ENSPMRG00000021450	ENSPMRG00000021458	ENSPMRG00000021473	LRRC8E (ENSPMRG00000021498)	ENSPMRG00000021502	MAP2K7 (ENSPMRG00000021512)	ENSPMRG00000021528	EVI5L (ENSPMRG00000021559)	ENSPMRG00000021584	ENSPMRG00000021607	CACNA1A (ENSPMRG00000008615)	MAN2B1 (ENSPMRG00000010644)	TRMT1 (ENSPMRG00000010678)	NACC1 (ENSPMRG00000010691)	STX10 (ENSPMRG00000010697) #21	IER2 (ENSPMRG00000010701) #22	ENSPMRG00000010703	WDR83 (ENSPMRG00000010708)	FBXW9 (ENSPMRG00000010713)	TNPO2 (ENSPMRG00000010718)	ENSPMRG00000010732	TRIR (ENSPMRG00000010734)	GET3 (ENSPMRG00000010741)	BEST2 (ENSPMRG00000010746)	HOOK2 (ENSPMRG00000010757)	JUNB (ENSPMRG00000010774)	ENSPMRG00000010777	PRDX2 (ENSPMRG00000010782)	RNASEH2A (ENSPMRG00000010800)	ENSPMRG00000010809	TTC1 (ENSPMRG00000010829)
Argentine black and white tegu	MODERN SPECIES	1	ADGRL1 (ENSSMRG00000004800)	ASF1B (ENSSMRG00000004645)	ENSSMRG00000004635	ENSSMRG00000004570	ENSSMRG00000004567	ENSSMRG00000004565	LRRC8E (ENSSMRG00000004563)	ENSSMRG00000004561	MAP2K7 (ENSSMRG00000004553)	EVI5L (ENSSMRG00000004471)	ENSSMRG00000004469	MAN2B1 (ENSSMRG00000004416)	TRMT1 (ENSSMRG00000004401)	NACC1 (ENSSMRG00000004373)	STX10 (ENSSMRG00000004371) #21	IER2 (ENSSMRG00000004370) #22	WDR83OS (ENSSMRG00000004362)	WDR83 (ENSSMRG00000004361)	FBXW9 (ENSSMRG00000004357)	TNPO2 (ENSSMRG00000004344)	ENSSMRG00000004342	TRIR (ENSSMRG00000004338)	GET3 (ENSSMRG00000004333)	BEST2 (ENSSMRG00000004322)	HOOK2 (ENSSMRG00000004311)	JUNB (ENSSMRG00000004310)	PRDX2 (ENSSMRG00000004309)	RNASEH2A (ENSSMRG00000004307)	ENSSMRG00000004305	TTC1 (ENSSMRG00000004302)	PWWP2A (ENSSMRG00000004300)
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00940000163111.a.b.a	ENSGT00530000063936.a	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT01030000236111	ENSGT00940000158914	ENSGT00530000063861.a	ENSGT00940000153846.a.b.l	ENSGT00940000153846.a.b.k	ENSGT01030000234575.c.a.b	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00390000002121	ENSGT00940000159016	ENSGT00390000006806	ENSGT00940000156708.a.a	ENSGT00940000163721	ENSGT00390000012267	ENSGT00390000003817	ENSGT00940000161361	ENSGT00940000160152	ENSGT00940000161195	ENSGT00940000155828	ENSGT00390000010768	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139
Elapidae	ANCESTRAL SPECIES	2	ENSGT00390000004692.d.a	ENSGT00940000163111.a.b.a	ENSGT00530000063936.a	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT01030000236111	ENSGT00940000158914	ENSGT00940000153846.a.b.k	ENSGT01030000234575.c.a.b	ENSGT01010000228131	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00390000002121	ENSGT00940000159016	ENSGT00390000006806	ENSGT00940000156708.a.a	ENSGT00940000163721	ENSGT00390000012267	ENSGT00390000003817	ENSGT00940000161361	ENSGT00940000160152	ENSGT00940000161195	ENSGT00940000155828	ENSGT00390000010768	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139
Indian cobra	MODERN SPECIES	1	ENSNNAG00000009215	ENSNNAG00000009175	ENSNNAG00000008971	LRRC8E (ENSNNAG00000008928)	ENSNNAG00000008909	ENSNNAG00000008892	MAP2K7 (ENSNNAG00000008800)	EVI5L (ENSNNAG00000008716)	ENSNNAG00000008673	ENSNNAG00000008637	CACNA1A (ENSNNAG00000004323)	MAN2B1 (ENSNNAG00000003915)	TRMT1 (ENSNNAG00000003347)	NACC1 (ENSNNAG00000003310)	STX10 (ENSNNAG00000003280) #21	IER2 (ENSNNAG00000003270) #22	WDR83OS (ENSNNAG00000003263)	WDR83 (ENSNNAG00000003258)	FBXW9 (ENSNNAG00000003236)	TNPO2 (ENSNNAG00000003146)	ENSNNAG00000003114	TRIR (ENSNNAG00000003106)	GET3 (ENSNNAG00000003094)	BEST2 (ENSNNAG00000003074)	HOOK2 (ENSNNAG00000003053)	JUNB (ENSNNAG00000003045)	PRDX2 (ENSNNAG00000003037)	RNASEH2A (ENSNNAG00000003023)	TTC1 (ENSNNAG00000003009)	PWWP2A (ENSNNAG00000003001)	FABP6 (ENSNNAG00000002991)
Elapidae_a	ANCESTRAL SPECIES	11	ENSGT00390000004692.d.a	ENSGT00940000163111.a.b.a	ENSGT00530000063936.a	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT01030000236111	ENSGT00940000158914	ENSGT00940000153846.a.b.k	ENSGT01030000234575.c.a.b	ENSGT01010000228131	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00390000002121	ENSGT00940000159016	ENSGT00390000006806	ENSGT00940000156708.a.a	ENSGT00940000163721	ENSGT00390000012267	ENSGT00390000003817	ENSGT00940000161361	ENSGT00940000160152	ENSGT00940000161195	ENSGT00940000155828	ENSGT00390000010768	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139
Acanthophiinae	ANCESTRAL SPECIES	12	ENSGT00390000004692.d.a	ENSGT00940000163111.a.b.a	ENSGT00530000063936.a	ENSGT00940000154382.a.a	ENSGT00940000159311.c	ENSGT01030000236111	ENSGT00940000158914	ENSGT00940000153846.a.b.k	ENSGT01030000234575.c.a.b	ENSGT01010000228131	ENSGT00940000156518.C	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00390000002121	ENSGT00940000159016	ENSGT00390000006806	ENSGT00940000156708.a.a	ENSGT00940000163721	ENSGT00390000012267	ENSGT00390000003817.bb	ENSGT00940000161361	ENSGT00940000160152	ENSGT00940000161195	ENSGT00940000155828	ENSGT00390000010768	ENSGT00940000157213	ENSGT00940000157692	ENSGT00940000157139
Eastern brown snake	MODERN SPECIES	6	ENSPTXG00000005987	ENSPTXG00000005989	ENSPTXG00000005990	ENSPTXG00000005991	LRRC8E (ENSPTXG00000005992)	ENSPTXG00000005993	MAP2K7 (ENSPTXG00000005994)	EVI5L (ENSPTXG00000005995)	ENSPTXG00000006000	CACNA1A (ENSPTXG00000006005)	MAN2B1 (ENSPTXG00000007879)	TRMT1 (ENSPTXG00000007880)	NACC1 (ENSPTXG00000007881)	STX10 (ENSPTXG00000007882) #21	ENSPTXG00000007883 #21	IER2 (ENSPTXG00000007884) #22	WDR83OS (ENSPTXG00000007885)	WDR83 (ENSPTXG00000007886)	FBXW9 (ENSPTXG00000007888)	TNPO2 (ENSPTXG00000007892)	ENSPTXG00000007898	TRIR (ENSPTXG00000007900)	GET3 (ENSPTXG00000007901)	BEST2 (ENSPTXG00000007902)	HOOK2 (ENSPTXG00000007904)	JUNB (ENSPTXG00000007907)	PRDX2 (ENSPTXG00000007908)	RNASEH2A (ENSPTXG00000007909)	ENSPTXG00000007911	TTC1 (ENSPTXG00000007912)	PWWP2A (ENSPTXG00000007913)
tuatara	MODERN SPECIES	308							ENSSPUG00000001312	ENSSPUG00000001310	C19orf53 (ENSSPUG00000001304)	YJU2B (ENSSPUG00000001274)	ENSSPUG00000001252	CACNA1A (ENSSPUG00000001121)	ENSSPUG00000001102	TRMT1 (ENSSPUG00000001084)	STX10 (ENSSPUG00000001048) #21	IER2 (ENSSPUG00000001041) #22	WDR83OS (ENSSPUG00000001018)	ENSSPUG00000001009	ENSSPUG00000000994	DHPS (ENSSPUG00000000972)	TNPO2 (ENSSPUG00000000736)	ENSSPUG00000000724	TRIR (ENSSPUG00000000705)	GET3 (ENSSPUG00000000673)	HOOK2 (ENSSPUG00000000577)
Archelosauria	ANCESTRAL SPECIES	28	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000005830	ENSGT00390000014585
Cryptodira	ANCESTRAL SPECIES	45			ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000005830	ENSGT00390000014585
Testudinoidea	ANCESTRAL SPECIES	38	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000005830	ENSGT00390000014585
Emydidae	ANCESTRAL SPECIES	48	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00990000205655	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00390000009016	ENSGT00940000154739.A	ENSGT00390000005830	ENSGT00390000014585
painted turtle	MODERN SPECIES	2403	HOOK2 (ENSCPBG00000023905)	BEST2 (ENSCPBG00000023904)	GET3 (ENSCPBG00000023903)	TRIR (ENSCPBG00000023902)	ENSCPBG00000023900	TNPO2 (ENSCPBG00000023892)	FBXW9 (ENSCPBG00000023887)	ENSCPBG00000023879	DHPS (ENSCPBG00000023877)	ENSCPBG00000023873	WDR83OS (ENSCPBG00000023872)	MAN2B1 (ENSCPBG00000023871)	TRMT1 (ENSCPBG00000023866)	NACC1 (ENSCPBG00000023862)	STX10 (ENSCPBG00000023860) #21	IER2 (ENSCPBG00000023859) #22	CACNA1A (ENSCPBG00000023849)	ENSCPBG00000023837	YJU2B (ENSCPBG00000023832)	ENSCPBG00000023829	ZSWIM4 (ENSCPBG00000023828)	NANOS3 (ENSCPBG00000023819)	CC2D1A (ENSCPBG00000023818)	PODNL1 (ENSCPBG00000023814)	DCAF15 (ENSCPBG00000023812)	RFX1 (ENSCPBG00000023811)	RLN3 (ENSCPBG00000023809)	ENSCPBG00000023805	ENSCPBG00000023801
Testudinidae	ANCESTRAL SPECIES	41	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b	ENSGT00940000159327	ENSGT00940000163101 #21	ENSGT00900000141021.b.b.d #22	ENSGT00940000156518.C	ENSGT00530000063615.b	ENSGT00390000013732	ENSGT00390000011740	ENSGT00940000162102	ENSGT00950000183135.A.b	ENSGT00390000009595.b	ENSGT00940000162059	ENSGT00390000011987	ENSGT01050000244879.a.b	ENSGT00940000154396.b.a	ENSGT00940000159829	ENSGT00520000055591.a	ENSGT00950000182964.a.a	ENSGT01100000263497.E.b
Goode s thornscrub tortoise	MODERN SPECIES	152	HOOK2 (ENSGEVG00005019137)	BEST2 (ENSGEVG00005019104)	GET3 (ENSGEVG00005019088)	TRIR (ENSGEVG00005019081)	ENSGEVG00005019076	TNPO2 (ENSGEVG00005019053)	FBXW9 (ENSGEVG00005019042)	ENSGEVG00005019028	DHPS (ENSGEVG00005019003)	WDR83 (ENSGEVG00005018986)	WDR83OS (ENSGEVG00005018973)	MAN2B1 (ENSGEVG00005018951)	TRMT1 (ENSGEVG00005018931)	NACC1 (ENSGEVG00005018916)	STX10 (ENSGEVG00005018902) #21	IER2 (ENSGEVG00005018887) #22	CACNA1A (ENSGEVG00005016785)	ENSGEVG00005016468	ENSGEVG00005016432	ENSGEVG00005016394	ENSGEVG00005016311	ENSGEVG00005016258	YJU2B (ENSGEVG00005016237)	ENSGEVG00005016207	ENSGEVG00005016117	ZSWIM4 (ENSGEVG00005016081)	NANOS3 (ENSGEVG00005016038)	CC2D1A (ENSGEVG00005015986)	ENSGEVG00005015952	PODNL1 (ENSGEVG00005015827)	ENSGEVG00005015785