Rodentia ANCESTRAL SPECIES ENSGT00730000110915.b ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444 #18 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Rodentia_B ANCESTRAL SPECIES ENSGT00730000110915.b ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444 #18 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Myomorpha ANCESTRAL SPECIES 12 ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444.b #18 ENSGT00940000155444.a #19 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Muroidea ANCESTRAL SPECIES 6 ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444.b #18 ENSGT00940000155444.a #19 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Muroidea_A ANCESTRAL SPECIES 5 ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444.b #18 ENSGT00940000155444.a #19 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Cricetidae ANCESTRAL SPECIES 6 ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444.b #18 ENSGT00940000155444.a #19 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000165376 #31 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 Cricetinae ANCESTRAL SPECIES 12 ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444.b #18 ENSGT00940000155444.a #19 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000165376 #31 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Chinese hamster chok1gshd MODERN SPECIES 66 Chd1l (ENSCGRG00001021624) #7 Fmo5 (ENSCGRG00001013887) #8 Prkab2 (ENSCGRG00001018736) #9 Pde4dip (ENSCGRG00001021057) #10 Sec22b (ENSCGRG00001021908) #11 Notch2 (ENSCGRG00001014398) #12 Adam30 (ENSCGRG00001009068) #13 Reg4 (ENSCGRG00001000234) #14 Hmgcs2 (ENSCGRG00001020820) #15 ENSCGRG00001015588 #16 Zfp697 (ENSCGRG00001008232) #17 ENSCGRG00001019902 #18 ENSCGRG00001013270 #19 ENSCGRG00001023014 #20 Hao2 (ENSCGRG00001020203) #21 Wars2 (ENSCGRG00001018718) #22 Tbx15 (ENSCGRG00001024224) #23 Spag17 (ENSCGRG00001013560) #24 Wdr3 (ENSCGRG00001019544) #25 Gdap2 (ENSCGRG00001012369) #26 Tent5c (ENSCGRG00001005586) #27 Man1a2 (ENSCGRG00001020266) #28 Vtcn1 (ENSCGRG00001015357) #29 Trim45 (ENSCGRG00001000157) #30 ENSCGRG00001006277 #31 Cd101 (ENSCGRG00001024359) #32 Ptgfrn (ENSCGRG00001022148) #33 Cd2 (ENSCGRG00001019348) #34 Igsf3 (ENSCGRG00001017829) #35 Atp1a1 (ENSCGRG00001024330) #36 Mab21l3 (ENSCGRG00001018373) #37 Golden Hamster MODERN SPECIES 910 Hao2 (ENSMAUG00000000718) #21 Wars2 (ENSMAUG00000006394) #22 Tbx15 (ENSMAUG00000010399) #23 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444.b #18 ENSGT00940000155444.a #19 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000164746 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Northern American deer mouse MODERN SPECIES 19 ENSPEMG00000028867 Pde4dip (ENSPEMG00000014907) #10 Sec22b (ENSPEMG00000028857) #11 Notch2 (ENSPEMG00000009366) #12 Adam30 (ENSPEMG00000026187) #13 Reg4 (ENSPEMG00000014392) #14 Hmgcs2 (ENSPEMG00000004811) #15 Phgdh (ENSPEMG00000004948) #16 Zfp697 (ENSPEMG00000025468) #17 ENSPEMG00000026521 #18 Hao2 (ENSPEMG00000000115) #21 ENSPEMG00000027797 #19 ENSPEMG00000025075 #19 ENSPEMG00000027699 #19 ENSPEMG00000024697 #19 ENSPEMG00000018152 #22 Tbx15 (ENSPEMG00000026645) #23 Spag17 (ENSPEMG00000012291) #24 Wdr3 (ENSPEMG00000011928) #25 Gdap2 (ENSPEMG00000020913) #26 ENSPEMG00000031182 #27 Man1a2 (ENSPEMG00000007670) #28 ENSPEMG00000027103 #29 Trim45 (ENSPEMG00000007787) #30 ENSPEMG00000010451 ENSPEMG00000010330 Cd101 (ENSPEMG00000008402) #32 Ptgfrn (ENSPEMG00000009682) #33 Cd2 (ENSPEMG00000018550) #34 Igsf3 (ENSPEMG00000011916) #35 Atp1a1 (ENSPEMG00000010999) #36 Prairie vole MODERN SPECIES 8 Gja5 (ENSMOCG00000019445) Acp6 (ENSMOCG00000021116) Bcl9 (ENSMOCG00000002460) Chd1l (ENSMOCG00000006305) #7 Fmo5 (ENSMOCG00000016787) #8 Prkab2 (ENSMOCG00000017982) #9 Pde4dip (ENSMOCG00000015898) #10 Sec22b (ENSMOCG00000016265) #11 Notch2 (ENSMOCG00000017629) #12 Hmgcs2 (ENSMOCG00000012622) #15 ENSMOCG00000019393 #16 Zfp697 (ENSMOCG00000021360) #17 ENSMOCG00000019719 #18 ENSMOCG00000020634 #19 ENSMOCG00000020989 #19 Wars2 (ENSMOCG00000005144) #22 Tbx15 (ENSMOCG00000012596) #23 ENSMOCG00000009935 Spag17 (ENSMOCG00000001590) #24 Wdr3 (ENSMOCG00000014361) #25 Gdap2 (ENSMOCG00000011700) #26 Tent5c (ENSMOCG00000018840) #27 Man1a2 (ENSMOCG00000020901) #28 Vtcn1 (ENSMOCG00000000748) #29 Trim45 (ENSMOCG00000000422) #30 Ttf2 (ENSMOCG00000008415) Ptgfrn (ENSMOCG00000020768) #33 Igsf3 (ENSMOCG00000005813) #35 Atp1a1 (ENSMOCG00000006963) #36 Mab21l3 (ENSMOCG00000016617) #37 ENSMOCG00000020465 Murinae ANCESTRAL SPECIES 5 ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863.eb.a #16 ENSGT00820000127150 #17 ENSGT00940000155444.b #18 ENSGT00940000155444.a #19 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Mus ANCESTRAL SPECIES 7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863.eb.a #16 ENSGT00820000127150 #17 ENSGT00940000155444.b #18 ENSGT00940000155444.a.h.a #19 ENSGT00940000155444.a.h.b #19 ENSGT00940000155444.a.g #19 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Mus_A ANCESTRAL SPECIES 9 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863.eb.a #16 ENSGT00820000127150 #17 ENSGT00940000155444.b #18 ENSGT00940000155444.a.h.a.b #19 ENSGT00940000155444.a.h.a.a #19 ENSGT00940000155444.a.h.b #19 ENSGT00940000155444.a.g #19 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Mus_B ANCESTRAL SPECIES 8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863.eb.a #16 ENSGT00820000127150 #17 ENSGT00940000155444.b.e #18 ENSGT00940000155444.a.h.a.b #19 ENSGT00940000155444.a.h.a.a #19 ENSGT00940000155444.a.h.b #19 ENSGT00940000155444.a.g #19 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Mouse MODERN SPECIES 12 Notch2 (ENSMUSG00000027878) #12 Adam30 (ENSMUSG00000043468) #13 Reg4 (ENSMUSG00000027876) #14 Hmgcs2 (ENSMUSG00000027875) #15 Phgdh (ENSMUSG00000053398) #16 Zfp697 (ENSMUSG00000050064) #17 Hsd3b9 (ENSMUSG00000090817) #18 Hsd3b4 (ENSMUSG00000095143) #18 Hsd3b8 (ENSMUSG00000095388) #18 Hsd3b5 (ENSMUSG00000038092) #18 Hsd3b2 (ENSMUSG00000063730) #19 Hsd3b3 (ENSMUSG00000062410) #19 Hsd3b6 (ENSMUSG00000027869) #19 Hsd3b1 (ENSMUSG00000027871) #19 Hao2 (ENSMUSG00000027870) #21 Wars2 (ENSMUSG00000004233) #22 Tbx15 (ENSMUSG00000027868) #23 Spag17 (ENSMUSG00000027867) #24 Wdr3 (ENSMUSG00000033285) #25 Gdap2 (ENSMUSG00000027865) #26 Tent5c (ENSMUSG00000044468) #27 Man1a2 (ENSMUSG00000008763) #28 Vtcn1 (ENSMUSG00000051076) #29 Trim45 (ENSMUSG00000033233) #30 Ttf2 (ENSMUSG00000033222) Cd101 (ENSMUSG00000086564) #32 Ptgfrn (ENSMUSG00000027864) #33 Cd2 (ENSMUSG00000027863) #34 Igsf3 (ENSMUSG00000042035) #35 Atp1a1 (ENSMUSG00000033161) #36 Mab21l3 (ENSMUSG00000044313) #37 Mus_C ANCESTRAL SPECIES 6 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863.eb.a #16 ENSGT00820000127150 #17 ENSGT00940000155444.b.e #18 ENSGT00940000155444.a.h.a.b #19 ENSGT00940000155444.a.h.a.a #19 ENSGT00940000155444.a.g #19 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Steppe mouse MODERN SPECIES 2899 Hsd3b2 (ENSMSIG00000004348) #19 Hsd3b1 (ENSMSIG00000004286) #19 Hao2 (ENSMSIG00000004233) #21 Wars2 (ENSMSIG00000004129) #22 Tbx15 (ENSMSIG00000004097) #23 ENSMSIG00000004083 Spag17 (ENSMSIG00000003885) #24 Wdr3 (ENSMSIG00000003820) #25 Gdap2 (ENSMSIG00000003680) #26 spretus MODERN SPECIES 12 Sec22b (MGP_SPRETEiJ_G0026352) #11 Notch2 (MGP_SPRETEiJ_G0026353) #12 Adam30 (MGP_SPRETEiJ_G0026354) #13 Reg4 (MGP_SPRETEiJ_G0026355) #14 Hmgcs2 (MGP_SPRETEiJ_G0026356) #15 MGP_SPRETEiJ_G0026357 #16 Zfp697 (MGP_SPRETEiJ_G0026358) #17 MGP_SPRETEiJ_G0026359 #18 MGP_SPRETEiJ_G0026360 #18 MGP_SPRETEiJ_G0026362 #18 MGP_SPRETEiJ_G0026361 #18 Hsd3b2 (MGP_SPRETEiJ_G0026363) #19 Hsd3b3 (MGP_SPRETEiJ_G0026365) #19 Hsd3b1 (MGP_SPRETEiJ_G0026366) #19 Hao2 (MGP_SPRETEiJ_G0026367) #21 Wars2 (MGP_SPRETEiJ_G0026368) #22 Tbx15 (MGP_SPRETEiJ_G0026369) #23 Spag17 (MGP_SPRETEiJ_G0026370) #24 Wdr3 (MGP_SPRETEiJ_G0026371) #25 Gdap2 (MGP_SPRETEiJ_G0026372) #26 Tent5c (MGP_SPRETEiJ_G0026373) #27 Man1a2 (MGP_SPRETEiJ_G0026374) #28 Vtcn1 (MGP_SPRETEiJ_G0026375) #29 Trim45 (MGP_SPRETEiJ_G0026376) #30 Ttf2 (MGP_SPRETEiJ_G0026377) Cd101 (MGP_SPRETEiJ_G0026378) #32 Ptgfrn (MGP_SPRETEiJ_G0026379) #33 Cd2 (MGP_SPRETEiJ_G0026380) #34 Igsf3 (MGP_SPRETEiJ_G0026381) #35 Atp1a1 (MGP_SPRETEiJ_G0026382) #36 Mab21l3 (MGP_SPRETEiJ_G0026383) #37 Shrew mouse MODERN SPECIES 17 MGP_PahariEiJ_G0026847 #9 MGP_PahariEiJ_G0026848 Pde4dip (MGP_PahariEiJ_G0026849) #10 Sec22b (MGP_PahariEiJ_G0026850) #11 Notch2 (MGP_PahariEiJ_G0026851) #12 MGP_PahariEiJ_G0026852 #13 Reg4 (MGP_PahariEiJ_G0026853) #14 Hmgcs2 (MGP_PahariEiJ_G0026854) #15 Phgdh (MGP_PahariEiJ_G0026855) #16 Zfp697 (MGP_PahariEiJ_G0026856) #17 MGP_PahariEiJ_G0026857 #19 MGP_PahariEiJ_G0026858 #19 MGP_PahariEiJ_G0026859 #19 Hsd3b1 (MGP_PahariEiJ_G0026860) #19 Hao2 (MGP_PahariEiJ_G0026861) #21 Wars2 (MGP_PahariEiJ_G0026862) #22 Tbx15 (MGP_PahariEiJ_G0026863) #23 Spag17 (MGP_PahariEiJ_G0026864) #24 Wdr3 (MGP_PahariEiJ_G0026865) #25 Gdap2 (MGP_PahariEiJ_G0026866) #26 Tent5c (MGP_PahariEiJ_G0026867) #27 Man1a2 (MGP_PahariEiJ_G0026868) #28 Vtcn1 (MGP_PahariEiJ_G0026869) #29 MGP_PahariEiJ_G0026870 #30 Ttf2 (MGP_PahariEiJ_G0026871) Cd101 (MGP_PahariEiJ_G0026872) #32 Ptgfrn (MGP_PahariEiJ_G0026873) #33 Cd2 (MGP_PahariEiJ_G0026874) #34 Igsf3 (MGP_PahariEiJ_G0026875) #35 Atp1a1 (MGP_PahariEiJ_G0026876) #36 Mab21l3 (MGP_PahariEiJ_G0026877) #37 Rat MODERN SPECIES 11 Sec22b (ENSRNOG00000018673) #11 Notch2 (ENSRNOG00000018835) #12 Adam30 (ENSRNOG00000019044) #13 Reg4 (ENSRNOG00000019046) #14 Hmgcs2 (ENSRNOG00000019120) #15 Phgdh (ENSRNOG00000019328) #16 Zfp697 (ENSRNOG00000065357) #17 Hsd3b5 (ENSRNOG00000019417) #18 Hsd3b5-ps1 (ENSRNOG00000070670) #18 Hsd3b2 (ENSRNOG00000019441) #19 Hsd3b3 (ENSRNOG00000063905) #19 Hsd3b1 (ENSRNOG00000070622) #19 AABR07012635.1 (ENSRNOG00000053190) Hao2 (ENSRNOG00000019470) #21 LOC120100604 (ENSRNOG00000065447) Wars2 (ENSRNOG00000019508) #22 Tbx15 (ENSRNOG00000019565) #23 Spag17 (ENSRNOG00000037196) #24 Wdr3 (ENSRNOG00000019670) #25 Gdap2 (ENSRNOG00000019754) #26 Tent5c (ENSRNOG00000070242) #27 Man1a2 (ENSRNOG00000015226) #28 ENSRNOG00000067753 Vtcn1 (ENSRNOG00000015279) #29 Trim45 (ENSRNOG00000015347) #30 Ttf2 (ENSRNOG00000057761) Cd101 (ENSRNOG00000037190) #32 Ptgfrn (ENSRNOG00000015655) #33 ENSRNOG00000069649 Cd2 (ENSRNOG00000015821) #34 Igsf3 (ENSRNOG00000023851) #35 Lesser Egyptian jerboa MODERN SPECIES 144 ENSJJAG00000018205 #19 Hao2 (ENSJJAG00000021719) #21 ENSJJAG00000022645 Wars2 (ENSJJAG00000000897) #22 ENSJJAG00000013379 Tbx15 (ENSJJAG00000013591) #23 Spag17 (ENSJJAG00000008428) #24 Wdr3 (ENSJJAG00000013861) #25 ENSJJAG00000013505 #26 ENSJJAG00000013768 ENSJJAG00000014767 ENSJJAG00000017333 Tent5c (ENSJJAG00000013174) #27 Man1a2 (ENSJJAG00000017865) #28 ENSJJAG00000018170 Vtcn1 (ENSJJAG00000019207) #29 Trim45 (ENSJJAG00000007227) #30 Ttf2 (ENSJJAG00000015225) Ptgfrn (ENSJJAG00000019616) #33 Kangaroo rat MODERN SPECIES 397 ENSDORG00000015516 Lrig2 (ENSDORG00000011666) Zfp697 (ENSDORG00000028932) #17 ENSDORG00000029522 #18 ENSDORG00000007977 #18 Hao2 (ENSDORG00000003236) #21 Wars2 (ENSDORG00000008562) #22 Tbx15 (ENSDORG00000005620) #23 ENSDORG00000023254 Spag17 (ENSDORG00000011032) #24 Wdr3 (ENSDORG00000011031) #25 Gdap2 (ENSDORG00000001079) #26 Tent5c (ENSDORG00000010159) #27 Man1a2 (ENSDORG00000025695) #28 Vtcn1 (ENSDORG00000013786) #29 Ttf2 (ENSDORG00000013781) Cd101 (ENSDORG00000013779) #32 Ptgfrn (ENSDORG00000013777) #33 Igsf3 (ENSDORG00000010085) #35 Atp1a1 (ENSDORG00000028959) #36 Mab21l3 (ENSDORG00000010259) #37 ENSDORG00000028402 Rodentia_A ANCESTRAL SPECIES ENSGT00730000110915.b ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000162954 #13 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444 #18 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Hystricomorpha DUPLICATION Hystricomorpha ANCESTRAL SPECIES 23 ENSGT00940000158408 ENSGT00730000110915.b ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444 #18 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A.i #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Hystricomorpha_a ANCESTRAL SPECIES 14 ENSGT00940000158408 ENSGT00730000110915.b ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444 #18 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A.i #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000167338 ENSGT00940000164746 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 Hystricomorpha_b ANCESTRAL SPECIES 6 ENSGT00730000110915.b ENSGT01100000263570.B ENSGT00940000159402 #7 ENSGT00940000160493 #8 ENSGT00940000159284 #9 ENSGT00950000183190.a.a.b #10 ENSGT00940000156349 #11 ENSGT00940000155030 #12 ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444.g.a #18 ENSGT00940000155444.h #18 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A.i #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000167338 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Long-tailed chinchilla MODERN SPECIES 142 REG4 (ENSCLAG00000007386) #14 HMGCS2 (ENSCLAG00000006432) #15 PHGDH (ENSCLAG00000005972) #16 ZNF697 (ENSCLAG00000016771) #17 ENSCLAG00000009086 #18 ENSCLAG00000008815 #18 HAO2 (ENSCLAG00000005779) #21 WARS2 (ENSCLAG00000004926) #22 TBX15 (ENSCLAG00000008292) #23 SPAG17 (ENSCLAG00000006388) #24 WDR3 (ENSCLAG00000010657) #25 GDAP2 (ENSCLAG00000008843) #26 ENSCLAG00000007247 TENT5C (ENSCLAG00000006985) #27 MAN1A2 (ENSCLAG00000008573) #28 VTCN1 (ENSCLAG00000014982) #29 TRIM45 (ENSCLAG00000010898) #30 ENSCLAG00000014230 CD101 (ENSCLAG00000010019) #32 PTGFRN (ENSCLAG00000008229) #33 CD2 (ENSCLAG00000007838) #34 IGSF3 (ENSCLAG00000006923) #35 ATP1A1 (ENSCLAG00000005733) #36 Degu MODERN SPECIES 298 NOTCH2 (ENSODEG00000000797) #12 ENSODEG00000000653 ENSODEG00000000642 REG4 (ENSODEG00000000629) #14 HMGCS2 (ENSODEG00000000553) #15 PHGDH (ENSODEG00000001506) #16 ZNF697 (ENSODEG00000001481) #17 ENSODEG00000001464 #18 ENSODEG00000018670 ENSODEG00000001448 #18 ENSODEG00000001440 #18 HAO2 (ENSODEG00000001256) #21 ENSODEG00000001240 ENSODEG00000001230 ENSODEG00000018671 WARS2 (ENSODEG00000001212) #22 TBX15 (ENSODEG00000001193) #23 Guinea pig MODERN SPECIES 2 BCL9 (ENSCPOG00000012202) ENSCPOG00000022795 CHD1L (ENSCPOG00000009000) #7 Fmo5 (ENSCPOG00000013868) #8 PRKAB2 (ENSCPOG00000033400) #9 ENSCPOG00000007934 #10 SEC22B (ENSCPOG00000031768) #11 NOTCH2 (ENSCPOG00000015738) #12 REG4 (ENSCPOG00000025637) #14 HMGCS2 (ENSCPOG00000006339) #15 PHGDH (ENSCPOG00000006732) #16 ZNF697 (ENSCPOG00000033846) #17 ENSCPOG00000008386 #18 ENSCPOG00000033437 #18 ENSCPOG00000001451 #18 WARS2 (ENSCPOG00000000616) #22 TBX15 (ENSCPOG00000000615) #23 SPAG17 (ENSCPOG00000011317) #24 WDR3 (ENSCPOG00000011305) #25 GDAP2 (ENSCPOG00000012599) #26 TENT5C (ENSCPOG00000035573) #27 MAN1A2 (ENSCPOG00000004935) #28 VTCN1 (ENSCPOG00000034001) #29 ENSCPOG00000000605 CD101 (ENSCPOG00000015741) #32 PTGFRN (ENSCPOG00000015740) #33 CD2 (ENSCPOG00000036418) #34 IGSF3 (ENSCPOG00000002029) #35 ATP1A1 (ENSCPOG00000000927) #36 MAB21L3 (ENSCPOG00000009511) #37 SLC22A15 (ENSCPOG00000009506) Naked mole-rat female MODERN SPECIES 10 CHD1L (ENSHGLG00000008933) #7 ENSHGLG00000038214 ENSHGLG00000037846 ENSHGLG00000039288 ENSHGLG00000005182 #8 ENSHGLG00000033772 #9 ENSHGLG00000001174 ENSHGLG00000004729 #10 ENSHGLG00000016365 #11 ENSHGLG00000015205 #12 ENSHGLG00000049042 ENSHGLG00000042386 #17 ENSHGLG00000006464 #18 HSD3B1 (ENSHGLG00000033840) #18 ENSHGLG00000042619 ENSHGLG00000038215 #22 TBX15 (ENSHGLG00000050081) #23 ENSHGLG00000032534 SPAG17 (ENSHGLG00000009162) #24 WDR3 (ENSHGLG00000017936) #25 ENSHGLG00000017537 #26 ENSHGLG00000041120 FAM46C (ENSHGLG00000043157) #27 MAN1A2 (ENSHGLG00000017646) #28 ENSHGLG00000045985 VTCN1 (ENSHGLG00000018792) #29 TRIM45 (ENSHGLG00000017735) #30 TTF2 (ENSHGLG00000012459) CD101 (ENSHGLG00000018298) #32 PTGFRN (ENSHGLG00000019106) #33 CD2 (ENSHGLG00000014947) #34 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153724.A.j #22 Naked mole-rat female MODERN SPECIES 23 IL12B (ENSHGLG00000013907) ADRA1B (ENSHGLG00000015871) ENSHGLG00000015069 PWWP2A (ENSHGLG00000010411) ENSHGLG00000009227 CCNJL (ENSHGLG00000041358) C1QTNF2 (ENSHGLG00000046801) FAM200C (ENSHGLG00000036354) SLU7 (ENSHGLG00000009442) ENSHGLG00000008073 ENSHGLG00000038625 ENSHGLG00000005435 ENSHGLG00000034285 ENSHGLG00000020663 ENSHGLG00000039327 ENSHGLG00000034193 #22 ENSHGLG00000007765 ENSHGLG00000006271 GABRA1 (ENSHGLG00000034287) GABRG2 (ENSHGLG00000043732) ENSHGLG00000007398 ENSHGLG00000020342 CCNG1 (ENSHGLG00000037731) ENSHGLG00000005569 HMMR (ENSHGLG00000005524) MAT2B (ENSHGLG00000012512) ENSHGLG00000012298 ENSHGLG00000049155 ENSHGLG00000043966 TENM2 (ENSHGLG00000007420) WWC1 (ENSHGLG00000017261) Sciuridae ANCESTRAL SPECIES ENSGT00940000159402 #7 ENSGT00940000160493.m #8 ENSGT00940000159284 #9 ENSGT00940000162954 #13 ENSGT00940000155030 #12 ENSGT00940000156349 #11 ENSGT00950000183190.a.a.b #10 ENSGT00420000029746.e.b ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444.k #18 ENSGT00940000155444.l #18 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Marmotini ANCESTRAL SPECIES 62 ENSGT00950000184903.b ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444.k.a #18 ENSGT00940000155444.k.b #18 ENSGT00940000155444.l #18 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Marmotini_b ANCESTRAL SPECIES 74 ENSGT00950000184903.b ENSGT00940000161011 #14 ENSGT00390000006096.a.a #15 ENSGT00940000155863 #16 ENSGT00820000127150 #17 ENSGT00940000155444.k.a #18 ENSGT00940000155444.k.b #18 ENSGT00940000155444.l #18 ENSGT00390000018717.b.a.b #21 ENSGT00940000153724.A #22 ENSGT00940000159013 #23 ENSGT00390000013693 #24 ENSGT00940000153859.a #25 ENSGT00940000156336 #26 ENSGT00940000158856 #27 ENSGT00940000157498 #28 ENSGT00940000157300 #29 ENSGT00940000154334.k #30 ENSGT00940000162718 ENSGT00940000161722 #32 ENSGT00940000158367 #33 ENSGT01030000234540.E #34 ENSGT00940000155177.b #35 ENSGT00940000154840.b #36 ENSGT01050000244827.B #37 Squirrel MODERN SPECIES 227 ENSSTOG00000032563 REG4 (ENSSTOG00000001926) #14 HMGCS2 (ENSSTOG00000001915) #15 PHGDH (ENSSTOG00000001906) #16 ZNF697 (ENSSTOG00000028256) #17 ENSSTOG00000021630 #18 ENSSTOG00000030106 #18 ENSSTOG00000023140 #18 HAO2 (ENSSTOG00000004251) #21 WARS2 (ENSSTOG00000013051) #22 TBX15 (ENSSTOG00000013040) #23 SPAG17 (ENSSTOG00000003532) #24 WDR3 (ENSSTOG00000003504) #25 GDAP2 (ENSSTOG00000024699) #26 TENT5C (ENSSTOG00000010392) #27 MAN1A2 (ENSSTOG00000016016) #28 VTCN1 (ENSSTOG00000007389) #29 TRIM45 (ENSSTOG00000007369) #30 ENSSTOG00000034928 TTF2 (ENSSTOG00000010927) CD101 (ENSSTOG00000010919) #32 PTGFRN (ENSSTOG00000010916) #33 CD2 (ENSSTOG00000004188) #34 IGSF3 (ENSSTOG00000022906) #35 ATP1A1 (ENSSTOG00000016127) #36 Arctic ground squirrel MODERN SPECIES 590 ENSUPAG00010009929 REG4 (ENSUPAG00010009917) #14 HMGCS2 (ENSUPAG00010009904) #15 PHGDH (ENSUPAG00010009877) #16 ZNF697 (ENSUPAG00010009865) #17 ENSUPAG00010009847 #18 ENSUPAG00010009837 #18 ENSUPAG00010009823 #18 HAO2 (ENSUPAG00010009819) #21 WARS2 (ENSUPAG00010009809) #22 TBX15 (ENSUPAG00010009799) #23 Alpin marmot MODERN SPECIES 79 ENSMMMG00000015528 REG4 (ENSMMMG00000015512) #14 HMGCS2 (ENSMMMG00000015483) #15 PHGDH (ENSMMMG00000015473) #16 ZNF697 (ENSMMMG00000015462) #17 ENSMMMG00000015443 #18 ENSMMMG00000015429 #18 ENSMMMG00000015398 #18 HAO2 (ENSMMMG00000015386) #21 WARS2 (ENSMMMG00000015379) #22 TBX15 (ENSMMMG00000015373) #23 ENSMMMG00000015354 #24 WDR3 (ENSMMMG00000015336) #25 GDAP2 (ENSMMMG00000015308) #26 TENT5C (ENSMMMG00000015304) #27 MAN1A2 (ENSMMMG00000015283) #28 VTCN1 (ENSMMMG00000015255) #29 TRIM45 (ENSMMMG00000015213) #30 ENSMMMG00000015205 TTF2 (ENSMMMG00000015196) CD101 (ENSMMMG00000015154) #32 PTGFRN (ENSMMMG00000015141) #33 CD2 (ENSMMMG00000015127) #34 IGSF3 (ENSMMMG00000015107) #35 ATP1A1 (ENSMMMG00000015066) #36 Eurasian red squirrel MODERN SPECIES ENSSVLG00005003464 #9 ADAM30 (ENSSVLG00005003444) #13 NOTCH2 (ENSSVLG00005003351) #12 SEC22B (ENSSVLG00005003320) #11 PDE4DIP (ENSSVLG00005002435) #10 ENSSVLG00005002128 REG4 (ENSSVLG00005002100) #14 HMGCS2 (ENSSVLG00005002058) #15 PHGDH (ENSSVLG00005002011) #16 ZNF697 (ENSSVLG00005001991) #17 ENSSVLG00005001978 #18 ENSSVLG00005001914 #18 ENSSVLG00005001762 #18 ENSSVLG00005001708 #18 HAO2 (ENSSVLG00005001685) #21 WARS2 (ENSSVLG00005001663) #22 TBX15 (ENSSVLG00005001632) #23 ENSSVLG00005001591 #24 WDR3 (ENSSVLG00005001572) #25 ENSSVLG00005001561 GDAP2 (ENSSVLG00005001518) #26 TENT5C (ENSSVLG00005001495) #27 MAN1A2 (ENSSVLG00005001469) #28 VTCN1 (ENSSVLG00005001433) #29 TRIM45 (ENSSVLG00005001388) #30 ENSSVLG00005001350 ENSSVLG00005001327 CD101 (ENSSVLG00005001302) #32 PTGFRN (ENSSVLG00005001283) #33 CD2 (ENSSVLG00005001265) #34 IGSF3 (ENSSVLG00005001236) #35