Boreoeutheria	ANCESTRAL SPECIES		ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596
Euarchontoglires	ANCESTRAL SPECIES		ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00730000110915.b #7	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Glires	ANCESTRAL SPECIES		ENSGT00730000110915.b #7	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Lagomorpha	ANCESTRAL SPECIES	1	ENSGT00730000110915.b #7	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00940000155030 #12	ENSGT00940000156349 #13	ENSGT00950000183190.a.a.b #14	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Rabbit	MODERN SPECIES	4	BCL9 (ENSOCUG00000012143) #7	ENSOCUG00000027286 #8	CHD1L (ENSOCUG00000009336) #9	FMO5 (ENSOCUG00000009330) #10	PRKAB2 (ENSOCUG00000009325) #11	NOTCH2 (ENSOCUG00000016565) #12	SEC22B (ENSOCUG00000026877) #13	PDE4DIP (ENSOCUG00000011228) #14	ADAM30 (ENSOCUG00000013791) #15	ENSOCUG00000005773 #16	HMGCS2 (ENSOCUG00000005767) #17	PHGDH (ENSOCUG00000005759) #18	ZNF697 (ENSOCUG00000014070) #19	ENSOCUG00000004132 #20	HAO2 (ENSOCUG00000017949) #21	WARS2 (ENSOCUG00000012330) #22	TBX15 (ENSOCUG00000012320) #23	SPAG17 (ENSOCUG00000007586) #24	WDR3 (ENSOCUG00000007572) #25	GDAP2 (ENSOCUG00000007568) #26	ENSOCUG00000027717 #27	ENSOCUG00000026654 #28	MAN1A2 (ENSOCUG00000012648) #29	VTCN1 (ENSOCUG00000026343) #30	TRIM45 (ENSOCUG00000000237) #31	TTF2 (ENSOCUG00000000613) #32	CD101 (ENSOCUG00000000612) #33	PTGFRN (ENSOCUG00000000608) #34	CD2 (ENSOCUG00000008474) #35	IGSF3 (ENSOCUG00000005284) #36	ATP1A1 (ENSOCUG00000001324) #37
Pika	MODERN SPECIES	5967																WARS2 (ENSOPRG00000004874) #22	TBX15 (ENSOPRG00000004847) #23
Rodentia	ANCESTRAL SPECIES		ENSGT00730000110915.b #7	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Rodentia_A	ANCESTRAL SPECIES		ENSGT00730000110915.b #7	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Hystricomorpha	DUPLICATION
Hystricomorpha	ANCESTRAL SPECIES	23	ENSGT00940000158408	ENSGT00730000110915.b #7	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A.i #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00940000158408	ENSGT00730000110915.b #7	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A.i #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000167338	ENSGT00940000164746	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00730000110915.b #7	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444.g.a #20	ENSGT00940000155444.h #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A.i #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000167338	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Long-tailed chinchilla	MODERN SPECIES	142									REG4 (ENSCLAG00000007386) #16	HMGCS2 (ENSCLAG00000006432) #17	PHGDH (ENSCLAG00000005972) #18	ZNF697 (ENSCLAG00000016771) #19	ENSCLAG00000009086 #20	ENSCLAG00000008815 #20	HAO2 (ENSCLAG00000005779) #21	WARS2 (ENSCLAG00000004926) #22	TBX15 (ENSCLAG00000008292) #23	SPAG17 (ENSCLAG00000006388) #24	WDR3 (ENSCLAG00000010657) #25	GDAP2 (ENSCLAG00000008843) #26	ENSCLAG00000007247	TENT5C (ENSCLAG00000006985)	MAN1A2 (ENSCLAG00000008573) #29	VTCN1 (ENSCLAG00000014982) #30	TRIM45 (ENSCLAG00000010898) #31	ENSCLAG00000014230	CD101 (ENSCLAG00000010019) #33	PTGFRN (ENSCLAG00000008229) #34	CD2 (ENSCLAG00000007838) #35	IGSF3 (ENSCLAG00000006923) #36	ATP1A1 (ENSCLAG00000005733) #37
Degu	MODERN SPECIES	298	NOTCH2 (ENSODEG00000000797) #12	ENSODEG00000000653	ENSODEG00000000642	REG4 (ENSODEG00000000629) #16	HMGCS2 (ENSODEG00000000553) #17	PHGDH (ENSODEG00000001506) #18	ZNF697 (ENSODEG00000001481) #19	ENSODEG00000001464 #20	ENSODEG00000018670	ENSODEG00000001448 #20	ENSODEG00000001440 #20	HAO2 (ENSODEG00000001256) #21	ENSODEG00000001240	ENSODEG00000001230	ENSODEG00000018671	WARS2 (ENSODEG00000001212) #22	TBX15 (ENSODEG00000001193) #23
Guinea pig	MODERN SPECIES	2	BCL9 (ENSCPOG00000012202) #7	ENSCPOG00000022795 #8	CHD1L (ENSCPOG00000009000) #9	Fmo5 (ENSCPOG00000013868) #10	PRKAB2 (ENSCPOG00000033400) #11	ENSCPOG00000007934 #14	SEC22B (ENSCPOG00000031768) #13	NOTCH2 (ENSCPOG00000015738) #12	REG4 (ENSCPOG00000025637) #16	HMGCS2 (ENSCPOG00000006339) #17	PHGDH (ENSCPOG00000006732) #18	ZNF697 (ENSCPOG00000033846) #19	ENSCPOG00000008386 #20	ENSCPOG00000033437 #20	ENSCPOG00000001451 #20	WARS2 (ENSCPOG00000000616) #22	TBX15 (ENSCPOG00000000615) #23	SPAG17 (ENSCPOG00000011317) #24	WDR3 (ENSCPOG00000011305) #25	GDAP2 (ENSCPOG00000012599) #26	TENT5C (ENSCPOG00000035573)	MAN1A2 (ENSCPOG00000004935) #29	VTCN1 (ENSCPOG00000034001) #30	ENSCPOG00000000605	CD101 (ENSCPOG00000015741) #33	PTGFRN (ENSCPOG00000015740) #34	CD2 (ENSCPOG00000036418) #35	IGSF3 (ENSCPOG00000002029) #36	ATP1A1 (ENSCPOG00000000927) #37	MAB21L3 (ENSCPOG00000009511)	SLC22A15 (ENSCPOG00000009506)
Naked mole-rat female	MODERN SPECIES	10	CHD1L (ENSHGLG00000008933) #9	ENSHGLG00000038214	ENSHGLG00000037846	ENSHGLG00000039288	ENSHGLG00000005182 #10	ENSHGLG00000033772 #11	ENSHGLG00000001174	ENSHGLG00000004729 #14	ENSHGLG00000016365 #13	ENSHGLG00000015205 #12	ENSHGLG00000049042	ENSHGLG00000042386 #19	ENSHGLG00000006464 #20	HSD3B1 (ENSHGLG00000033840) #20	ENSHGLG00000042619	ENSHGLG00000038215 #22	TBX15 (ENSHGLG00000050081) #23	ENSHGLG00000032534	SPAG17 (ENSHGLG00000009162) #24	WDR3 (ENSHGLG00000017936) #25	ENSHGLG00000017537 #26	ENSHGLG00000041120	FAM46C (ENSHGLG00000043157)	MAN1A2 (ENSHGLG00000017646) #29	ENSHGLG00000045985	VTCN1 (ENSHGLG00000018792) #30	TRIM45 (ENSHGLG00000017735) #31	TTF2 (ENSHGLG00000012459) #32	CD101 (ENSHGLG00000018298) #33	PTGFRN (ENSHGLG00000019106) #34	CD2 (ENSHGLG00000014947) #35
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00940000153724.A.j #22
Naked mole-rat female	MODERN SPECIES	23	IL12B (ENSHGLG00000013907)	ADRA1B (ENSHGLG00000015871)	ENSHGLG00000015069	PWWP2A (ENSHGLG00000010411)	ENSHGLG00000009227	CCNJL (ENSHGLG00000041358)	C1QTNF2 (ENSHGLG00000046801)	FAM200C (ENSHGLG00000036354)	SLU7 (ENSHGLG00000009442)	ENSHGLG00000008073	ENSHGLG00000038625	ENSHGLG00000005435	ENSHGLG00000034285	ENSHGLG00000020663	ENSHGLG00000039327	ENSHGLG00000034193 #22	ENSHGLG00000007765	ENSHGLG00000006271	GABRA1 (ENSHGLG00000034287)	GABRG2 (ENSHGLG00000043732)	ENSHGLG00000007398	ENSHGLG00000020342	CCNG1 (ENSHGLG00000037731)	ENSHGLG00000005569	HMMR (ENSHGLG00000005524)	MAT2B (ENSHGLG00000012512)	ENSHGLG00000012298	ENSHGLG00000049155	ENSHGLG00000043966	TENM2 (ENSHGLG00000007420)	WWC1 (ENSHGLG00000017261)
Sciuridae	ANCESTRAL SPECIES		ENSGT00940000159402 #9	ENSGT00940000160493.m #10	ENSGT00940000159284 #11	ENSGT00940000162954 #15	ENSGT00940000155030 #12	ENSGT00940000156349 #13	ENSGT00950000183190.a.a.b #14	ENSGT00420000029746.e.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444.k #20	ENSGT00940000155444.l #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Marmotini	ANCESTRAL SPECIES	62							ENSGT00950000184903.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444.k.a #20	ENSGT00940000155444.k.b #20	ENSGT00940000155444.l #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Marmotini_b	ANCESTRAL SPECIES	74							ENSGT00950000184903.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444.k.a #20	ENSGT00940000155444.k.b #20	ENSGT00940000155444.l #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Squirrel	MODERN SPECIES	227							ENSSTOG00000032563	REG4 (ENSSTOG00000001926) #16	HMGCS2 (ENSSTOG00000001915) #17	PHGDH (ENSSTOG00000001906) #18	ZNF697 (ENSSTOG00000028256) #19	ENSSTOG00000021630 #20	ENSSTOG00000030106 #20	ENSSTOG00000023140 #20	HAO2 (ENSSTOG00000004251) #21	WARS2 (ENSSTOG00000013051) #22	TBX15 (ENSSTOG00000013040) #23	SPAG17 (ENSSTOG00000003532) #24	WDR3 (ENSSTOG00000003504) #25	GDAP2 (ENSSTOG00000024699) #26	TENT5C (ENSSTOG00000010392)	MAN1A2 (ENSSTOG00000016016) #29	VTCN1 (ENSSTOG00000007389) #30	TRIM45 (ENSSTOG00000007369) #31	ENSSTOG00000034928	TTF2 (ENSSTOG00000010927) #32	CD101 (ENSSTOG00000010919) #33	PTGFRN (ENSSTOG00000010916) #34	CD2 (ENSSTOG00000004188) #35	IGSF3 (ENSSTOG00000022906) #36	ATP1A1 (ENSSTOG00000016127) #37
Arctic ground squirrel	MODERN SPECIES	590							ENSUPAG00010009929	REG4 (ENSUPAG00010009917) #16	HMGCS2 (ENSUPAG00010009904) #17	PHGDH (ENSUPAG00010009877) #18	ZNF697 (ENSUPAG00010009865) #19	ENSUPAG00010009847 #20	ENSUPAG00010009837 #20	ENSUPAG00010009823 #20	HAO2 (ENSUPAG00010009819) #21	WARS2 (ENSUPAG00010009809) #22	TBX15 (ENSUPAG00010009799) #23
Alpin marmot	MODERN SPECIES	79							ENSMMMG00000015528	REG4 (ENSMMMG00000015512) #16	HMGCS2 (ENSMMMG00000015483) #17	PHGDH (ENSMMMG00000015473) #18	ZNF697 (ENSMMMG00000015462) #19	ENSMMMG00000015443 #20	ENSMMMG00000015429 #20	ENSMMMG00000015398 #20	HAO2 (ENSMMMG00000015386) #21	WARS2 (ENSMMMG00000015379) #22	TBX15 (ENSMMMG00000015373) #23	ENSMMMG00000015354 #24	WDR3 (ENSMMMG00000015336) #25	GDAP2 (ENSMMMG00000015308) #26	TENT5C (ENSMMMG00000015304)	MAN1A2 (ENSMMMG00000015283) #29	VTCN1 (ENSMMMG00000015255) #30	TRIM45 (ENSMMMG00000015213) #31	ENSMMMG00000015205	TTF2 (ENSMMMG00000015196) #32	CD101 (ENSMMMG00000015154) #33	PTGFRN (ENSMMMG00000015141) #34	CD2 (ENSMMMG00000015127) #35	IGSF3 (ENSMMMG00000015107) #36	ATP1A1 (ENSMMMG00000015066) #37
Eurasian red squirrel	MODERN SPECIES		ENSSVLG00005003464 #11	ADAM30 (ENSSVLG00005003444) #15	NOTCH2 (ENSSVLG00005003351) #12	SEC22B (ENSSVLG00005003320) #13	PDE4DIP (ENSSVLG00005002435) #14	ENSSVLG00005002128	REG4 (ENSSVLG00005002100) #16	HMGCS2 (ENSSVLG00005002058) #17	PHGDH (ENSSVLG00005002011) #18	ZNF697 (ENSSVLG00005001991) #19	ENSSVLG00005001978 #20	ENSSVLG00005001914 #20	ENSSVLG00005001762 #20	ENSSVLG00005001708 #20	HAO2 (ENSSVLG00005001685) #21	WARS2 (ENSSVLG00005001663) #22	TBX15 (ENSSVLG00005001632) #23	ENSSVLG00005001591 #24	WDR3 (ENSSVLG00005001572) #25	ENSSVLG00005001561	GDAP2 (ENSSVLG00005001518) #26	TENT5C (ENSSVLG00005001495)	MAN1A2 (ENSSVLG00005001469) #29	VTCN1 (ENSSVLG00005001433) #30	TRIM45 (ENSSVLG00005001388) #31	ENSSVLG00005001350 #32	ENSSVLG00005001327 #32	CD101 (ENSSVLG00005001302) #33	PTGFRN (ENSSVLG00005001283) #34	CD2 (ENSSVLG00005001265) #35	IGSF3 (ENSSVLG00005001236) #36
Rodentia_B	ANCESTRAL SPECIES		ENSGT00730000110915.b #7	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Kangaroo rat	MODERN SPECIES	397										ENSDORG00000015516	Lrig2 (ENSDORG00000011666)	Zfp697 (ENSDORG00000028932) #19	ENSDORG00000029522 #20	ENSDORG00000007977 #20	Hao2 (ENSDORG00000003236) #21	Wars2 (ENSDORG00000008562) #22	Tbx15 (ENSDORG00000005620) #23	ENSDORG00000023254	Spag17 (ENSDORG00000011032) #24	Wdr3 (ENSDORG00000011031) #25	Gdap2 (ENSDORG00000001079) #26	Tent5c (ENSDORG00000010159)	Man1a2 (ENSDORG00000025695) #29	Vtcn1 (ENSDORG00000013786) #30	Ttf2 (ENSDORG00000013781) #32	Cd101 (ENSDORG00000013779) #33	Ptgfrn (ENSDORG00000013777) #34	Igsf3 (ENSDORG00000010085) #36	Atp1a1 (ENSDORG00000028959) #37	Mab21l3 (ENSDORG00000010259)	ENSDORG00000028402
Myomorpha	ANCESTRAL SPECIES	12	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444.b #20	ENSGT00940000155444.a #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Lesser Egyptian jerboa	MODERN SPECIES	144													ENSJJAG00000018205 #20	Hao2 (ENSJJAG00000021719) #21	ENSJJAG00000022645	Wars2 (ENSJJAG00000000897) #22	ENSJJAG00000013379	Tbx15 (ENSJJAG00000013591) #23	Spag17 (ENSJJAG00000008428) #24	Wdr3 (ENSJJAG00000013861) #25	ENSJJAG00000013505 #26	ENSJJAG00000013768	ENSJJAG00000014767	ENSJJAG00000017333	Tent5c (ENSJJAG00000013174)	Man1a2 (ENSJJAG00000017865) #29	ENSJJAG00000018170	Vtcn1 (ENSJJAG00000019207) #30	Trim45 (ENSJJAG00000007227) #31	Ttf2 (ENSJJAG00000015225) #32	Ptgfrn (ENSJJAG00000019616) #34
Muroidea	ANCESTRAL SPECIES	6	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444.b #20	ENSGT00940000155444.a #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444.b #20	ENSGT00940000155444.a #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Murinae	ANCESTRAL SPECIES	5	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863.eb.a #18	ENSGT00820000127150 #19	ENSGT00940000155444.b #20	ENSGT00940000155444.a #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Mus	ANCESTRAL SPECIES	7	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863.eb.a #18	ENSGT00820000127150 #19	ENSGT00940000155444.b #20	ENSGT00940000155444.a.h.a #20	ENSGT00940000155444.a.h.b #20	ENSGT00940000155444.a.g #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Mus_A	ANCESTRAL SPECIES	9	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863.eb.a #18	ENSGT00820000127150 #19	ENSGT00940000155444.b #20	ENSGT00940000155444.a.h.a.b #20	ENSGT00940000155444.a.h.a.a #20	ENSGT00940000155444.a.h.b #20	ENSGT00940000155444.a.g #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Mus_B	ANCESTRAL SPECIES	8	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863.eb.a #18	ENSGT00820000127150 #19	ENSGT00940000155444.b.e #20	ENSGT00940000155444.a.h.a.b #20	ENSGT00940000155444.a.h.a.a #20	ENSGT00940000155444.a.h.b #20	ENSGT00940000155444.a.g #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Mouse	MODERN SPECIES	12	Notch2 (ENSMUSG00000027878) #12	Adam30 (ENSMUSG00000043468) #15	Reg4 (ENSMUSG00000027876) #16	Hmgcs2 (ENSMUSG00000027875) #17	Phgdh (ENSMUSG00000053398) #18	Zfp697 (ENSMUSG00000050064) #19	Hsd3b9 (ENSMUSG00000090817) #20	Hsd3b4 (ENSMUSG00000095143) #20	Hsd3b8 (ENSMUSG00000095388) #20	Hsd3b5 (ENSMUSG00000038092) #20	Hsd3b2 (ENSMUSG00000063730) #20	Hsd3b3 (ENSMUSG00000062410) #20	Hsd3b6 (ENSMUSG00000027869) #20	Hsd3b1 (ENSMUSG00000027871) #20	Hao2 (ENSMUSG00000027870) #21	Wars2 (ENSMUSG00000004233) #22	Tbx15 (ENSMUSG00000027868) #23	Spag17 (ENSMUSG00000027867) #24	Wdr3 (ENSMUSG00000033285) #25	Gdap2 (ENSMUSG00000027865) #26	Tent5c (ENSMUSG00000044468)	Man1a2 (ENSMUSG00000008763) #29	Vtcn1 (ENSMUSG00000051076) #30	Trim45 (ENSMUSG00000033233) #31	Ttf2 (ENSMUSG00000033222) #32	Cd101 (ENSMUSG00000086564) #33	Ptgfrn (ENSMUSG00000027864) #34	Cd2 (ENSMUSG00000027863) #35	Igsf3 (ENSMUSG00000042035) #36	Atp1a1 (ENSMUSG00000033161) #37	Mab21l3 (ENSMUSG00000044313)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863.eb.a #18	ENSGT00820000127150 #19	ENSGT00940000155444.b.e #20	ENSGT00940000155444.a.h.a.b #20	ENSGT00940000155444.a.h.a.a #20	ENSGT00940000155444.a.g #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Steppe mouse	MODERN SPECIES	2899													Hsd3b2 (ENSMSIG00000004348) #20	Hsd3b1 (ENSMSIG00000004286) #20	Hao2 (ENSMSIG00000004233) #21	Wars2 (ENSMSIG00000004129) #22	Tbx15 (ENSMSIG00000004097) #23	ENSMSIG00000004083	Spag17 (ENSMSIG00000003885) #24	Wdr3 (ENSMSIG00000003820) #25	Gdap2 (ENSMSIG00000003680) #26
spretus	MODERN SPECIES	12	Sec22b (MGP_SPRETEiJ_G0026352) #13	Notch2 (MGP_SPRETEiJ_G0026353) #12	Adam30 (MGP_SPRETEiJ_G0026354) #15	Reg4 (MGP_SPRETEiJ_G0026355) #16	Hmgcs2 (MGP_SPRETEiJ_G0026356) #17	MGP_SPRETEiJ_G0026357 #18	Zfp697 (MGP_SPRETEiJ_G0026358) #19	MGP_SPRETEiJ_G0026359 #20	MGP_SPRETEiJ_G0026360 #20	MGP_SPRETEiJ_G0026362 #20	MGP_SPRETEiJ_G0026361 #20	Hsd3b2 (MGP_SPRETEiJ_G0026363) #20	Hsd3b3 (MGP_SPRETEiJ_G0026365) #20	Hsd3b1 (MGP_SPRETEiJ_G0026366) #20	Hao2 (MGP_SPRETEiJ_G0026367) #21	Wars2 (MGP_SPRETEiJ_G0026368) #22	Tbx15 (MGP_SPRETEiJ_G0026369) #23	Spag17 (MGP_SPRETEiJ_G0026370) #24	Wdr3 (MGP_SPRETEiJ_G0026371) #25	Gdap2 (MGP_SPRETEiJ_G0026372) #26	Tent5c (MGP_SPRETEiJ_G0026373)	Man1a2 (MGP_SPRETEiJ_G0026374) #29	Vtcn1 (MGP_SPRETEiJ_G0026375) #30	Trim45 (MGP_SPRETEiJ_G0026376) #31	Ttf2 (MGP_SPRETEiJ_G0026377) #32	Cd101 (MGP_SPRETEiJ_G0026378) #33	Ptgfrn (MGP_SPRETEiJ_G0026379) #34	Cd2 (MGP_SPRETEiJ_G0026380) #35	Igsf3 (MGP_SPRETEiJ_G0026381) #36	Atp1a1 (MGP_SPRETEiJ_G0026382) #37	Mab21l3 (MGP_SPRETEiJ_G0026383)
Shrew mouse	MODERN SPECIES	17	MGP_PahariEiJ_G0026847 #11	MGP_PahariEiJ_G0026848	Pde4dip (MGP_PahariEiJ_G0026849) #14	Sec22b (MGP_PahariEiJ_G0026850) #13	Notch2 (MGP_PahariEiJ_G0026851) #12	MGP_PahariEiJ_G0026852 #15	Reg4 (MGP_PahariEiJ_G0026853) #16	Hmgcs2 (MGP_PahariEiJ_G0026854) #17	Phgdh (MGP_PahariEiJ_G0026855) #18	Zfp697 (MGP_PahariEiJ_G0026856) #19	MGP_PahariEiJ_G0026857 #20	MGP_PahariEiJ_G0026858 #20	MGP_PahariEiJ_G0026859 #20	Hsd3b1 (MGP_PahariEiJ_G0026860) #20	Hao2 (MGP_PahariEiJ_G0026861) #21	Wars2 (MGP_PahariEiJ_G0026862) #22	Tbx15 (MGP_PahariEiJ_G0026863) #23	Spag17 (MGP_PahariEiJ_G0026864) #24	Wdr3 (MGP_PahariEiJ_G0026865) #25	Gdap2 (MGP_PahariEiJ_G0026866) #26	Tent5c (MGP_PahariEiJ_G0026867)	Man1a2 (MGP_PahariEiJ_G0026868) #29	Vtcn1 (MGP_PahariEiJ_G0026869) #30	MGP_PahariEiJ_G0026870 #31	Ttf2 (MGP_PahariEiJ_G0026871) #32	Cd101 (MGP_PahariEiJ_G0026872) #33	Ptgfrn (MGP_PahariEiJ_G0026873) #34	Cd2 (MGP_PahariEiJ_G0026874) #35	Igsf3 (MGP_PahariEiJ_G0026875) #36	Atp1a1 (MGP_PahariEiJ_G0026876) #37	Mab21l3 (MGP_PahariEiJ_G0026877)
Rat	MODERN SPECIES	11	Sec22b (ENSRNOG00000018673) #13	Notch2 (ENSRNOG00000018835) #12	Adam30 (ENSRNOG00000019044) #15	Reg4 (ENSRNOG00000019046) #16	Hmgcs2 (ENSRNOG00000019120) #17	Phgdh (ENSRNOG00000019328) #18	Zfp697 (ENSRNOG00000065357) #19	Hsd3b5 (ENSRNOG00000019417) #20	Hsd3b5-ps1 (ENSRNOG00000070670) #20	Hsd3b2 (ENSRNOG00000019441) #20	Hsd3b3 (ENSRNOG00000063905) #20	Hsd3b1 (ENSRNOG00000070622) #20	AABR07012635.1 (ENSRNOG00000053190)	Hao2 (ENSRNOG00000019470) #21	LOC120100604 (ENSRNOG00000065447)	Wars2 (ENSRNOG00000019508) #22	Tbx15 (ENSRNOG00000019565) #23	Spag17 (ENSRNOG00000037196) #24	Wdr3 (ENSRNOG00000019670) #25	Gdap2 (ENSRNOG00000019754) #26	Tent5c (ENSRNOG00000070242)	Man1a2 (ENSRNOG00000015226) #29	ENSRNOG00000067753	Vtcn1 (ENSRNOG00000015279) #30	Trim45 (ENSRNOG00000015347) #31	Ttf2 (ENSRNOG00000057761) #32	Cd101 (ENSRNOG00000037190) #33	Ptgfrn (ENSRNOG00000015655) #34	ENSRNOG00000069649	Cd2 (ENSRNOG00000015821) #35	Igsf3 (ENSRNOG00000023851) #36
Cricetidae	ANCESTRAL SPECIES	6	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444.b #20	ENSGT00940000155444.a #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000165376	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37
Cricetinae	ANCESTRAL SPECIES	12	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444.b #20	ENSGT00940000155444.a #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000165376	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Chinese hamster chok1gshd	MODERN SPECIES	66	Chd1l (ENSCGRG00001021624) #9	Fmo5 (ENSCGRG00001013887) #10	Prkab2 (ENSCGRG00001018736) #11	Pde4dip (ENSCGRG00001021057) #14	Sec22b (ENSCGRG00001021908) #13	Notch2 (ENSCGRG00001014398) #12	Adam30 (ENSCGRG00001009068) #15	Reg4 (ENSCGRG00001000234) #16	Hmgcs2 (ENSCGRG00001020820) #17	ENSCGRG00001015588 #18	Zfp697 (ENSCGRG00001008232) #19	ENSCGRG00001019902 #20	ENSCGRG00001013270 #20	ENSCGRG00001023014 #20	Hao2 (ENSCGRG00001020203) #21	Wars2 (ENSCGRG00001018718) #22	Tbx15 (ENSCGRG00001024224) #23	Spag17 (ENSCGRG00001013560) #24	Wdr3 (ENSCGRG00001019544) #25	Gdap2 (ENSCGRG00001012369) #26	Tent5c (ENSCGRG00001005586)	Man1a2 (ENSCGRG00001020266) #29	Vtcn1 (ENSCGRG00001015357) #30	Trim45 (ENSCGRG00001000157) #31	ENSCGRG00001006277	Cd101 (ENSCGRG00001024359) #33	Ptgfrn (ENSCGRG00001022148) #34	Cd2 (ENSCGRG00001019348) #35	Igsf3 (ENSCGRG00001017829) #36	Atp1a1 (ENSCGRG00001024330) #37	Mab21l3 (ENSCGRG00001018373)
Golden Hamster	MODERN SPECIES	910															Hao2 (ENSMAUG00000000718) #21	Wars2 (ENSMAUG00000006394) #22	Tbx15 (ENSMAUG00000010399) #23
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444.b #20	ENSGT00940000155444.a #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000164746	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000154840.b #37	ENSGT01050000244827.B
Northern American deer mouse	MODERN SPECIES	19	ENSPEMG00000028867	Pde4dip (ENSPEMG00000014907) #14	Sec22b (ENSPEMG00000028857) #13	Notch2 (ENSPEMG00000009366) #12	Adam30 (ENSPEMG00000026187) #15	Reg4 (ENSPEMG00000014392) #16	Hmgcs2 (ENSPEMG00000004811) #17	Phgdh (ENSPEMG00000004948) #18	Zfp697 (ENSPEMG00000025468) #19	ENSPEMG00000026521 #20	Hao2 (ENSPEMG00000000115) #21	ENSPEMG00000027797 #20	ENSPEMG00000025075 #20	ENSPEMG00000027699 #20	ENSPEMG00000024697 #20	ENSPEMG00000018152 #22	Tbx15 (ENSPEMG00000026645) #23	Spag17 (ENSPEMG00000012291) #24	Wdr3 (ENSPEMG00000011928) #25	Gdap2 (ENSPEMG00000020913) #26	ENSPEMG00000031182	Man1a2 (ENSPEMG00000007670) #29	ENSPEMG00000027103 #30	Trim45 (ENSPEMG00000007787) #31	ENSPEMG00000010451	ENSPEMG00000010330	Cd101 (ENSPEMG00000008402) #33	Ptgfrn (ENSPEMG00000009682) #34	Cd2 (ENSPEMG00000018550) #35	Igsf3 (ENSPEMG00000011916) #36	Atp1a1 (ENSPEMG00000010999) #37
Prairie vole	MODERN SPECIES	8	Gja5 (ENSMOCG00000019445)	Acp6 (ENSMOCG00000021116)	Bcl9 (ENSMOCG00000002460) #7	Chd1l (ENSMOCG00000006305) #9	Fmo5 (ENSMOCG00000016787) #10	Prkab2 (ENSMOCG00000017982) #11	Pde4dip (ENSMOCG00000015898) #14	Sec22b (ENSMOCG00000016265) #13	Notch2 (ENSMOCG00000017629) #12	Hmgcs2 (ENSMOCG00000012622) #17	ENSMOCG00000019393 #18	Zfp697 (ENSMOCG00000021360) #19	ENSMOCG00000019719 #20	ENSMOCG00000020634 #20	ENSMOCG00000020989 #20	Wars2 (ENSMOCG00000005144) #22	Tbx15 (ENSMOCG00000012596) #23	ENSMOCG00000009935	Spag17 (ENSMOCG00000001590) #24	Wdr3 (ENSMOCG00000014361) #25	Gdap2 (ENSMOCG00000011700) #26	Tent5c (ENSMOCG00000018840)	Man1a2 (ENSMOCG00000020901) #29	Vtcn1 (ENSMOCG00000000748) #30	Trim45 (ENSMOCG00000000422) #31	Ttf2 (ENSMOCG00000008415) #32	Ptgfrn (ENSMOCG00000020768) #34	Igsf3 (ENSMOCG00000005813) #36	Atp1a1 (ENSMOCG00000006963) #37	Mab21l3 (ENSMOCG00000016617)	ENSMOCG00000020465
Tree shrew	MODERN SPECIES	5847																WARS2 (ENSTBEG00000014634) #22	TBX15 (ENSTBEG00000014589) #23
Primates	ANCESTRAL SPECIES	4				ENSGT00420000029746.e.a.b.a	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00730000110915.b #7	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00940000162954 #15	ENSGT00940000155030 #12	ENSGT00940000156349 #13	ENSGT00950000183190.a.a.b #14	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000158408	ENSGT00730000110915.b #7	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00940000162954 #15	ENSGT00940000155030 #12	ENSGT00940000156349 #13	ENSGT00950000183190.a.a.b #14	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Lemuriformes_a	ANCESTRAL SPECIES	31	ENSGT00940000158408	ENSGT00730000110915.b #7	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00940000162954 #15	ENSGT00940000155030 #12	ENSGT00940000156349 #13	ENSGT00950000183190.a.a.b #14	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Coquerels sifaka	MODERN SPECIES	285	CHD1L (ENSPCOG00000023924) #9	FMO5 (ENSPCOG00000021948) #10	PRKAB2 (ENSPCOG00000014742) #11	NOTCH2 (ENSPCOG00000009637) #12	SEC22B (ENSPCOG00000014218) #13	ENSPCOG00000011997	ENSPCOG00000014195	PDE4DIP (ENSPCOG00000015883) #14	REG4 (ENSPCOG00000018461) #16	HMGCS2 (ENSPCOG00000027434) #17	ENSPCOG00000025200	PHGDH (ENSPCOG00000015198) #18	ZNF697 (ENSPCOG00000022280) #19	ENSPCOG00000016500	HAO2 (ENSPCOG00000022355) #21	WARS2 (ENSPCOG00000026406) #22	TBX15 (ENSPCOG00000000115) #23	SPAG17 (ENSPCOG00000023855) #24	ENSPCOG00000011579	GDAP2 (ENSPCOG00000005524) #26
Greater bamboo lemur	MODERN SPECIES	511							ENSPSMG00000016302	PDE4DIP (ENSPSMG00000016236) #14	REG4 (ENSPSMG00000015920) #16	HMGCS2 (ENSPSMG00000015892) #17	ENSPSMG00000015859	PHGDH (ENSPSMG00000015815) #18	ZNF697 (ENSPSMG00000015646) #19	ENSPSMG00000015637	HAO2 (ENSPSMG00000015617) #21	WARS2 (ENSPSMG00000015600) #22	TBX15 (ENSPSMG00000015582) #23	SPAG17 (ENSPSMG00000015573) #24	WDR3 (ENSPSMG00000015414) #25	GDAP2 (ENSPSMG00000015264) #26	TENT5C (ENSPSMG00000015247)	ENSPSMG00000015236	MAN1A2 (ENSPSMG00000015225) #29	VTCN1 (ENSPSMG00000015204) #30	TRIM45 (ENSPSMG00000015160) #31	TTF2 (ENSPSMG00000015117) #32	CD101 (ENSPSMG00000015090) #33	PTGFRN (ENSPSMG00000015068) #34	CD2 (ENSPSMG00000015045) #35	IGSF3 (ENSPSMG00000015029) #36	CD58 (ENSPSMG00000015016)
Mouse lemur	MODERN SPECIES	11	ACP6 (ENSMICG00000005556)	BCL9 (ENSMICG00000038350) #7	CHD1L (ENSMICG00000002497) #9	FMO5 (ENSMICG00000002485) #10	PRKAB2 (ENSMICG00000002483) #11	NOTCH2 (ENSMICG00000016769) #12	SEC22B (ENSMICG00000027609) #13	ENSMICG00000041490 #14	PDE4DIP (ENSMICG00000006770) #14	REG4 (ENSMICG00000004480) #16	HMGCS2 (ENSMICG00000004472) #17	PHGDH (ENSMICG00000004462) #18	ZNF697 (ENSMICG00000046814) #19	ENSMICG00000027917	HAO2 (ENSMICG00000030575) #21	WARS2 (ENSMICG00000026450) #22	TBX15 (ENSMICG00000048122) #23	SPAG17 (ENSMICG00000001795) #24	WDR3 (ENSMICG00000001783) #25	GDAP2 (ENSMICG00000001775) #26	TENT5C (ENSMICG00000001773)	ENSMICG00000009764 #29	VTCN1 (ENSMICG00000009755) #30	TRIM45 (ENSMICG00000009751) #31	ENSMICG00000009715	CD101 (ENSMICG00000009704) #33	PTGFRN (ENSMICG00000009691) #34	CD2 (ENSMICG00000011899) #35	IGSF3 (ENSMICG00000016709) #36	CD58 (ENSMICG00000042112)	ENSMICG00000042187
Bushbaby	MODERN SPECIES	188	GJA5 (ENSOGAG00000024557)	ACP6 (ENSOGAG00000003598)	BCL9 (ENSOGAG00000003597) #7	CHD1L (ENSOGAG00000008775) #9	FMO5 (ENSOGAG00000012809) #10	PRKAB2 (ENSOGAG00000012807) #11	ADAM30 (ENSOGAG00000029766) #15	NOTCH2 (ENSOGAG00000015075) #12	SEC22B (ENSOGAG00000034815) #13	PDE4DIP (ENSOGAG00000015829) #14	HMGCS2 (ENSOGAG00000000816) #17	PHGDH (ENSOGAG00000002736) #18	ZNF697 (ENSOGAG00000031708) #19	ENSOGAG00000032658 #20	HAO2 (ENSOGAG00000015232) #21	WARS2 (ENSOGAG00000007285) #22	TBX15 (ENSOGAG00000007282) #23	SPAG17 (ENSOGAG00000007408) #24	WDR3 (ENSOGAG00000007399) #25	GDAP2 (ENSOGAG00000007395) #26	TENT5C (ENSOGAG00000033246)	ENSOGAG00000028154	MAN1A2 (ENSOGAG00000003687) #29	VTCN1 (ENSOGAG00000006636) #30	TRIM45 (ENSOGAG00000006634) #31	TTF2 (ENSOGAG00000009039) #32	CD101 (ENSOGAG00000005273) #33	PTGFRN (ENSOGAG00000005271) #34	CD2 (ENSOGAG00000031305) #35	IGSF3 (ENSOGAG00000017055) #36	ENSOGAG00000002250
Haplorrhini	ANCESTRAL SPECIES	1				ENSGT00420000029746.e.a.b.a	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596
Simiiformes	ANCESTRAL SPECIES	3				ENSGT00420000029746.e.a.b.a	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000153362.b.g	ENSGT00510000049596
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00420000029746.e.a.b.a.a.a.a.b.a	ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a	ENSGT00940000161374.b.b	ENSGT00940000161374.a.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00420000029746.e.a.b.a.a.a.a.b.a	ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.d	ENSGT00940000161374.a.a.c	ENSGT00940000161374.b.b	ENSGT00940000161374.a.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Hominidae	ANCESTRAL SPECIES	3	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00420000029746.e.a.b.a.a.a.a.b.a	ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.d	ENSGT00940000161374.a.a.c	ENSGT00940000161374.b.b	ENSGT00940000161374.a.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.d	ENSGT00940000161374.a.a.c	ENSGT00940000161374.b.b	ENSGT00940000161374.a.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00890000139472.a.b	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Gorilla	MODERN SPECIES		ENSGGOG00000024499	ENSGGOG00000041518	ENSGGOG00000037054	NOTCH2 (ENSGGOG00000004007) #12	ADAM30 (ENSGGOG00000004006) #15	ENSGGOG00000043775	REG4 (ENSGGOG00000000553) #16	HMGCS2 (ENSGGOG00000010293) #17	PHGDH (ENSGGOG00000010284) #18	ZNF697 (ENSGGOG00000006415) #19	ENSGGOG00000041320	HSD3B1 (ENSGGOG00000003349)	HSD3B2 (ENSGGOG00000041410)	HAO2 (ENSGGOG00000009209) #21	ENSGGOG00000026106	WARS2 (ENSGGOG00000015028) #22	TBX15 (ENSGGOG00000013468) #23	ENSGGOG00000043257	SPAG17 (ENSGGOG00000012975) #24	WDR3 (ENSGGOG00000009982) #25	ENSGGOG00000006897 #26	TENT5C (ENSGGOG00000038013)	MAN1A2 (ENSGGOG00000014278) #29	VTCN1 (ENSGGOG00000025814) #30	TRIM45 (ENSGGOG00000014996) #31	TTF2 (ENSGGOG00000015790) #32	CD101 (ENSGGOG00000008209) #33	PTGFRN (ENSGGOG00000011825) #34	CD2 (ENSGGOG00000005260) #35	ENSGGOG00000022319 #36	ENSGGOG00000027658
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.d	ENSGT00940000161374.a.a.c	ENSGT00940000161374.b.b	ENSGT00940000161374.a.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00890000139472.a.b	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Human	MODERN SPECIES		FAM72B (ENSG00000188610)	PPIAL4A (ENSG00000263353)	NBPF26 (ENSG00000273136)	NOTCH2NLR (ENSG00000286106)	NBPF8 (ENSG00000270231)	SEC22B (ENSG00000265808) #13	NOTCH2 (ENSG00000134250) #12	ADAM30 (ENSG00000134249) #15	REG4 (ENSG00000134193) #16	HMGCS2 (ENSG00000134240) #17	PHGDH (ENSG00000092621) #18	ZNF697 (ENSG00000143067) #19	HSD3B1 (ENSG00000203857)	HSD3B2 (ENSG00000203859)	HAO2 (ENSG00000116882) #21	WARS2 (ENSG00000116874) #22	TBX15 (ENSG00000092607) #23	SPAG17 (ENSG00000155761) #24	WDR3 (ENSG00000065183) #25	GDAP2 (ENSG00000196505) #26	TENT5C (ENSG00000183508)	MAN1A2 (ENSG00000198162) #29	VTCN1 (ENSG00000134258) #30	TRIM45 (ENSG00000134253) #31	TTF2 (ENSG00000116830) #32	CD101 (ENSG00000134256) #33	PTGFRN (ENSG00000134247) #34	CD2 (ENSG00000116824) #35	IGSF3 (ENSG00000143061) #36	CD58 (ENSG00000116815)	ATP1A1 (ENSG00000163399) #37
Pan	ANCESTRAL SPECIES		ENSGT00940000162954 #15	ENSGT00940000153664.A.a.n.o.b	ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.d	ENSGT00940000161374.a.a.c	ENSGT00940000161374.b.b	ENSGT00940000161374.a.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00890000139472.a.b	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Chimpanzee	MODERN SPECIES		NOTCH2 (ENSPTRG00000048364) #12	ADAM30 (ENSPTRG00000030467) #15	ENSPTRG00000034182	ENSPTRG00000000232	REG4 (ENSPTRG00000001180) #16	HMGCS2 (ENSPTRG00000001179) #17	PHGDH (ENSPTRG00000001178) #18	ZNF697 (ENSPTRG00000001177) #19	ENSPTRG00000052660	ENSPTRG00000042979	HSD3B1 (ENSPTRG00000024031)	ENSPTRG00000047558	ENSPTRG00000048520	HSD3B2 (ENSPTRG00000023445)	HAO2 (ENSPTRG00000001174) #21	WARS2 (ENSPTRG00000001173) #22	TBX15 (ENSPTRG00000001172) #23	SPAG17 (ENSPTRG00000001170) #24	WDR3 (ENSPTRG00000001168) #25	GDAP2 (ENSPTRG00000001167) #26	TENT5C (ENSPTRG00000049021)	MAN1A2 (ENSPTRG00000024134) #29	VTCN1 (ENSPTRG00000001164) #30	TRIM45 (ENSPTRG00000001163) #31	TTF2 (ENSPTRG00000001162) #32	CD101 (ENSPTRG00000001160) #33	PTGFRN (ENSPTRG00000001158) #34	CD2 (ENSPTRG00000001157) #35	IGSF3 (ENSPTRG00000001154) #36	CD58 (ENSPTRG00000001153)	ENSPTRG00000050070
Bonobo	MODERN SPECIES		HJV (ENSPPAG00000040458)	NOTCH2 (ENSPPAG00000030139) #12	ADAM30 (ENSPPAG00000029925) #15	ENSPPAG00000037673	ENSPPAG00000040281	REG4 (ENSPPAG00000042890) #16	HMGCS2 (ENSPPAG00000033384) #17	PHGDH (ENSPPAG00000040285) #18	ENSPPAG00000040843	ENSPPAG00000029728	HSD3B1 (ENSPPAG00000028838)	ENSPPAG00000040984	ENSPPAG00000028516	HSD3B2 (ENSPPAG00000039150)	HAO2 (ENSPPAG00000027354) #21	WARS2 (ENSPPAG00000032746) #22	ENSPPAG00000027227	TBX15 (ENSPPAG00000035967) #23	ENSPPAG00000033918 #24	WDR3 (ENSPPAG00000029068) #25	GDAP2 (ENSPPAG00000028536) #26	TENT5C (ENSPPAG00000023449)	MAN1A2 (ENSPPAG00000028925) #29	VTCN1 (ENSPPAG00000023467) #30	TRIM45 (ENSPPAG00000027104) #31	TTF2 (ENSPPAG00000027542) #32	CD101 (ENSPPAG00000032745) #33	PTGFRN (ENSPPAG00000043179) #34	CD2 (ENSPPAG00000030761) #35	CD58 (ENSPPAG00000036763)	ATP1A1 (ENSPPAG00000039938) #37
Orangutan	MODERN SPECIES		ENSPPYG00000034509 #14	PDE4DIPP2 (ENSPPYG00000000955) #14	ENSPPYG00000039379	SEC22B (ENSPPYG00000000957) #13	NOTCH2 (ENSPPYG00000030910) #12	ADAM30 (ENSPPYG00000040766) #15	ENSPPYG00000000959	REG4 (ENSPPYG00000000960) #16	HMGCS2 (ENSPPYG00000000961) #17	PHGDH (ENSPPYG00000000962) #18	ZNF697 (ENSPPYG00000000963) #19	HSD3B1 (ENSPPYG00000000965)	ENSPPYG00000034285	HSD3B2 (ENSPPYG00000000964)	HAO2 (ENSPPYG00000000966) #21	WARS2 (ENSPPYG00000037222) #22	TBX15 (ENSPPYG00000000968) #23	SPAG17 (ENSPPYG00000000969) #24	WDR3 (ENSPPYG00000000970) #25	GDAP2 (ENSPPYG00000000971) #26	TENT5C (ENSPPYG00000000972)	MAN1A2 (ENSPPYG00000000973) #29	ENSPPYG00000031903	VTCN1 (ENSPPYG00000000974) #30	TRIM45 (ENSPPYG00000000975) #31	TTF2 (ENSPPYG00000000976) #32	CD101 (ENSPPYG00000000977) #33	PTGFRN (ENSPPYG00000000978) #34	CD2 (ENSPPYG00000000979) #35	IGSF3 (ENSPPYG00000000981) #36	CD58 (ENSPPYG00000000982)
Gibbon	MODERN SPECIES	2	SEC22B (ENSNLEG00000005498) #13	NOTCH2 (ENSNLEG00000005474) #12	ENSNLEG00000036247	ENSNLEG00000035008	REG4 (ENSNLEG00000005464) #16	HMGCS2 (ENSNLEG00000005455) #17	PHGDH (ENSNLEG00000005408) #18	ZNF697 (ENSNLEG00000005403) #19	ENSNLEG00000034143	ENSNLEG00000035738	ENSNLEG00000027783	HSD3B1 (ENSNLEG00000005390)	ENSNLEG00000027319	HSD3B2 (ENSNLEG00000035250)	HAO2 (ENSNLEG00000005367) #21	WARS2 (ENSNLEG00000005349) #22	TBX15 (ENSNLEG00000005347) #23	SPAG17 (ENSNLEG00000033248) #24	WDR3 (ENSNLEG00000005304) #25	GDAP2 (ENSNLEG00000005283) #26	TENT5C (ENSNLEG00000035910)	MAN1A2 (ENSNLEG00000005272) #29	VTCN1 (ENSNLEG00000005256) #30	TRIM45 (ENSNLEG00000005248) #31	TTF2 (ENSNLEG00000005209) #32	CD101 (ENSNLEG00000005188) #33	PTGFRN (ENSNLEG00000005178) #34	CD2 (ENSNLEG00000005167) #35	IGSF3 (ENSNLEG00000005162) #36	CD58 (ENSNLEG00000032597)	ATP1A1 (ENSNLEG00000005047) #37
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00420000029746.e.a.b.a.a.a.a.b.a	ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.a	ENSGT00940000161374.b.b	ENSGT00940000161374.a.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300.c #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00420000029746.e.a.b.a.a.a.a.b.a	ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.a	ENSGT00940000161374.b.b	ENSGT00940000161374.a.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300.c #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00420000029746.e.a.b.a.a.a.a.b.a	ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.a	ENSGT00940000161374.a.a.b	ENSGT01020000230346.A.cb.a.c	ENSGT00390000010165.i.b.b.b	ENSGT00940000161374.b.b	ENSGT00940000161374.a.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300.c #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Macaca	ANCESTRAL SPECIES		ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.a	ENSGT00940000161374.a.a.b	ENSGT01020000230346.A.cb.a.c	ENSGT00390000010165.i.b.b.b	ENSGT00940000161374.b.b	ENSGT00940000161374.a.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300.c #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Macaca_a	ANCESTRAL SPECIES		ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00940000161374.a.a.b	ENSGT00820000127150 #19	ENSGT00390000010165.i.b.b.b	ENSGT00940000161374.b.b	ENSGT00940000161374.a.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300.c #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Crab-eating macaque	MODERN SPECIES		ENSMFAG00000047720 #14	SEC22B (ENSMFAG00000043165) #13	NOTCH2 (ENSMFAG00000001144) #12	ADAM30 (ENSMFAG00000036625) #15	REG4 (ENSMFAG00000005388) #16	HMGCS2 (ENSMFAG00000043696) #17	PHGDH (ENSMFAG00000032226) #18	ENSMFAG00000061533	ENSMFAG00000056103	ENSMFAG00000049256	HSD3B1 (ENSMFAG00000045839)	ENSMFAG00000039795	ENSMFAG00000037292	HSD3B2 (ENSMFAG00000000449)	HAO2 (ENSMFAG00000002851) #21	WARS2 (ENSMFAG00000001270) #22	TBX15 (ENSMFAG00000044269) #23	SPAG17 (ENSMFAG00000043409) #24	WDR3 (ENSMFAG00000034570) #25	GDAP2 (ENSMFAG00000045882) #26	TENT5C (ENSMFAG00000063452)	MAN1A2 (ENSMFAG00000042171) #29	VTCN1 (ENSMFAG00000037561) #30	TRIM45 (ENSMFAG00000039230) #31	ENSMFAG00000042516	CD101 (ENSMFAG00000033865) #33	PTGFRN (ENSMFAG00000038301) #34	CD2 (ENSMFAG00000036150) #35	IGSF3 (ENSMFAG00000000910) #36	CD58 (ENSMFAG00000042899)	ENSMFAG00000000314
Rhesus	MODERN SPECIES		SEC22B (ENSMMUG00000062859) #13	NOTCH2 (ENSMMUG00000018375) #12	ADAM30 (ENSMMUG00000017482) #15	ENSMMUG00000052610	ENSMMUG00000014849	REG4 (ENSMMUG00000060387) #16	ENSMMUG00000062170	HMGCS2 (ENSMMUG00000023097) #17	PHGDH (ENSMMUG00000023089) #18	ENSMMUG00000029348	ZNF697 (ENSMMUG00000060016) #19	ENSMMUG00000056972	HSD3B1 (ENSMMUG00000047765)	HSD3B2 (ENSMMUG00000016568)	HAO2 (ENSMMUG00000016567) #21	WARS2 (ENSMMUG00000041046) #22	ENSMMUG00000059598	TBX15 (ENSMMUG00000009257) #23	ENSMMUG00000052186	SPAG17 (ENSMMUG00000008519) #24	WDR3 (ENSMMUG00000008513) #25	GDAP2 (ENSMMUG00000008509) #26	TENT5C (ENSMMUG00000004907)	MAN1A2 (ENSMMUG00000047035) #29	VTCN1 (ENSMMUG00000016964) #30	TRIM45 (ENSMMUG00000015976) #31	TTF2 (ENSMMUG00000016905) #32	CD101 (ENSMMUG00000016904) #33	PTGFRN (ENSMMUG00000016900) #34	CD2 (ENSMMUG00000052649) #35	IGSF3 (ENSMMUG00000008157) #36
Pig-tailed macaque	MODERN SPECIES	556	SEC22B (ENSMNEG00000042539) #13	NOTCH2 (ENSMNEG00000028518) #12	ENSMNEG00000044277	REG4 (ENSMNEG00000028106) #16	HMGCS2 (ENSMNEG00000037230) #17	PHGDH (ENSMNEG00000039018) #18	ZNF697 (ENSMNEG00000032913) #19	ENSMNEG00000028701	ENSMNEG00000044623	ENSMNEG00000034901	HSD3B1 (ENSMNEG00000038988)	ENSMNEG00000036898	ENSMNEG00000042859	HSD3B2 (ENSMNEG00000004563)	HAO2 (ENSMNEG00000033251) #21	WARS2 (ENSMNEG00000029069) #22	TBX15 (ENSMNEG00000037058) #23	SPAG17 (ENSMNEG00000037993) #24	WDR3 (ENSMNEG00000039555) #25	GDAP2 (ENSMNEG00000041814) #26	TENT5C (ENSMNEG00000016833)	MAN1A2 (ENSMNEG00000031399) #29	ENSMNEG00000043941 #30	TRIM45 (ENSMNEG00000035138) #31	TTF2 (ENSMNEG00000042285) #32	CD101 (ENSMNEG00000039661) #33	PTGFRN (ENSMNEG00000040097) #34	CD2 (ENSMNEG00000038892) #35	IGSF3 (ENSMNEG00000040709) #36	CD58 (ENSMNEG00000030019)	ATP1A1 (ENSMNEG00000034326) #37
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00420000029746.e.a.b.a.a.a.a.b.a	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.a	ENSGT00940000161374.a.a.b	ENSGT01020000230346.A.cb.a.c	ENSGT00390000010165.i.b.b.b	ENSGT00940000161374.b.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300.c #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Olive baboon	MODERN SPECIES		ADAM30 (ENSPANG00000021035) #15	ENSPANG00000031162	REG4 (ENSPANG00000009171) #16	ENSPANG00000044597	HMGCS2 (ENSPANG00000011380) #17	PHGDH (ENSPANG00000012431) #18	ZNF697 (ENSPANG00000018117) #19	ENSPANG00000037635	ENSPANG00000017026	ENSPANG00000037056	HSD3B1 (ENSPANG00000012519)	ENSPANG00000048358	HSD3B2 (ENSPANG00000009969)	HAO2 (ENSPANG00000004481) #21	ENSPANG00000045254	WARS2 (ENSPANG00000011381) #22	TBX15 (ENSPANG00000004604) #23	ENSPANG00000046444	ENSPANG00000050769	SPAG17 (ENSPANG00000003307) #24	WDR3 (ENSPANG00000020680) #25	GDAP2 (ENSPANG00000019088) #26	TENT5C (ENSPANG00000005228)	MAN1A2 (ENSPANG00000012472) #29	ENSPANG00000040057	ENSPANG00000042496	ENSPANG00000043622	VTCN1 (ENSPANG00000023608) #30	ENSPANG00000039901	TRIM45 (ENSPANG00000012295) #31	ENSPANG00000012432
Cercopithecinae_d	ANCESTRAL SPECIES	49	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00420000029746.e.a.b.a.a.a.a.b.b.b.b	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.a	ENSGT00940000161374.a.a.b	ENSGT01020000230346.A.cb.a.c	ENSGT00940000161374.b.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300.c #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Sooty mangabey	MODERN SPECIES	304	PDE4DIP (ENSCATG00000031339) #14	SEC22B (ENSCATG00000039138) #13	NOTCH2 (ENSCATG00000041772) #12	ENSCATG00000032864	REG4 (ENSCATG00000001299) #16	HMGCS2 (ENSCATG00000032352) #17	PHGDH (ENSCATG00000038103) #18	ZNF697 (ENSCATG00000002584) #19	ENSCATG00000035127	ENSCATG00000042151	ENSCATG00000031604	HSD3B1 (ENSCATG00000028188)	ENSCATG00000033726	HSD3B2 (ENSCATG00000031867)	HAO2 (ENSCATG00000035352) #21	WARS2 (ENSCATG00000041648) #22	TBX15 (ENSCATG00000031668) #23	SPAG17 (ENSCATG00000033246) #24	WDR3 (ENSCATG00000037200) #25	GDAP2 (ENSCATG00000034620) #26	TENT5C (ENSCATG00000019360)	MAN1A2 (ENSCATG00000035447) #29	ENSCATG00000035666 #30	TRIM45 (ENSCATG00000000941) #31	ENSCATG00000032574
Drill	MODERN SPECIES	121										ZNF697 (ENSMLEG00000034151) #19	ENSMLEG00000031616	HSD3B1 (ENSMLEG00000029430)	ENSMLEG00000040136	HSD3B2 (ENSMLEG00000031841)	HAO2 (ENSMLEG00000041972) #21	WARS2 (ENSMLEG00000028699) #22	TBX15 (ENSMLEG00000032093) #23
Vervet Monkey	MODERN SPECIES	12	PDE4DIP (ENSCSAG00000001746) #14	ENSCSAG00000000175	SEC22B (ENSCSAG00000001743) #13	NOTCH2 (ENSCSAG00000001741) #12	ADAM30 (ENSCSAG00000001737) #15	ENSCSAG00000001734	ENSCSAG00000001730	REG4 (ENSCSAG00000001723) #16	HMGCS2 (ENSCSAG00000001721) #17	PHGDH (ENSCSAG00000001719) #18	ZNF697 (ENSCSAG00000001718) #19	ENSCSAG00000000174	HSD3B1 (ENSCSAG00000001717)	HSD3B2 (ENSCSAG00000001716)	HAO2 (ENSCSAG00000001715) #21	WARS2 (ENSCSAG00000001713) #22	TBX15 (ENSCSAG00000001712) #23	SPAG17 (ENSCSAG00000001708) #24	WDR3 (ENSCSAG00000001705) #25	GDAP2 (ENSCSAG00000001704) #26	TENT5C (ENSCSAG00000000173)	MAN1A2 (ENSCSAG00000001702) #29	VTCN1 (ENSCSAG00000001701) #30	TRIM45 (ENSCSAG00000001700) #31	ENSCSAG00000001699	CD101 (ENSCSAG00000001698) #33	PTGFRN (ENSCSAG00000001697) #34	CD2 (ENSCSAG00000001696) #35	IGSF3 (ENSCSAG00000001695) #36	CD58 (ENSCSAG00000001694)	ENSCSAG00000001692
Rhinopithecus	ANCESTRAL SPECIES	10								ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.a.a.a	ENSGT00940000161374.b.b	ENSGT00940000161374.b.a.b	ENSGT00940000161374.b.a.a	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300.c #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000153362.b.g
Black snub-nosed monkey	MODERN SPECIES	299								HMGCS2 (ENSRBIG00000032746) #17	PHGDH (ENSRBIG00000006687) #18	ZNF697 (ENSRBIG00000028030) #19	ENSRBIG00000027868	HSD3B1 (ENSRBIG00000033676)	ENSRBIG00000044086	HSD3B2 (ENSRBIG00000039976)	HAO2 (ENSRBIG00000031990) #21	WARS2 (ENSRBIG00000019074) #22	TBX15 (ENSRBIG00000029551) #23	SPAG17 (ENSRBIG00000041783) #24	WDR3 (ENSRBIG00000039149) #25	GDAP2 (ENSRBIG00000041462) #26	TENT5C (ENSRBIG00000030666)	MAN1A2 (ENSRBIG00000030646) #29	ENSRBIG00000036563 #30	TRIM45 (ENSRBIG00000027871) #31	TTF2 (ENSRBIG00000042651) #32	CD101 (ENSRBIG00000034556) #33	PTGFRN (ENSRBIG00000044418) #34	CD2 (ENSRBIG00000042753) #35	IGSF3 (ENSRBIG00000038679) #36	ENSRBIG00000035126	CD58 (ENSRBIG00000044416)
Golden snub-nosed monkey	MODERN SPECIES	3191																WARS2 (ENSRROG00000032725) #22	TBX15 (ENSRROG00000039115) #23	ENSRROG00000038427
Platyrrhini	ANCESTRAL SPECIES							ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000167308	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374.d	ENSGT00940000161374.c	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000153362.b.g	ENSGT00510000049596
Cebidae	ANCESTRAL SPECIES	1									ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863.x.a #18	ENSGT00820000127150 #19	ENSGT00940000161374.d	ENSGT00940000161374.c	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000153362.b.g	ENSGT00510000049596
Cebidae_a	ANCESTRAL SPECIES	41														ENSGT00940000161374.c	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00940000153362.b.g	ENSGT00510000049596
Capuchin	MODERN SPECIES	32										PDE4DIP (ENSCCAG00000037292) #14	ENSCCAG00000030990	ENSCCAG00000028376	ENSCCAG00000028299	HAO2 (ENSCCAG00000023792) #21	ENSCCAG00000005716	WARS2 (ENSCCAG00000034099) #22	TBX15 (ENSCCAG00000025037) #23	SPAG17 (ENSCCAG00000023412) #24	ENSCCAG00000035368	WDR3 (ENSCCAG00000037237) #25	GDAP2 (ENSCCAG00000024697) #26	TENT5C (ENSCCAG00000020387)	MAN1A2 (ENSCCAG00000034354) #29	VTCN1 (ENSCCAG00000037336) #30	TRIM45 (ENSCCAG00000010371) #31	TTF2 (ENSCCAG00000032675) #32	CD101 (ENSCCAG00000037110) #33	PTGFRN (ENSCCAG00000034342) #34	ENSCCAG00000037368	CD2 (ENSCCAG00000036008) #35	IGSF3 (ENSCCAG00000035554) #36
Bolivian squirrel monkey	MODERN SPECIES	98														ENSSBOG00000028217	HAO2 (ENSSBOG00000026753) #21	WARS2 (ENSSBOG00000032994) #22	TBX15 (ENSSBOG00000030620) #23	ENSSBOG00000034778	SPAG17 (ENSSBOG00000019394) #24	WDR3 (ENSSBOG00000015569) #25	GDAP2 (ENSSBOG00000029276) #26	TENT5C (ENSSBOG00000019248)	MAN1A2 (ENSSBOG00000027903) #29	VTCN1 (ENSSBOG00000025248) #30	TRIM45 (ENSSBOG00000033971) #31	TTF2 (ENSSBOG00000022555) #32	CD101 (ENSSBOG00000024092) #33	ENSSBOG00000020480	PTGFRN (ENSSBOG00000020242) #34	ENSSBOG00000027638	CD2 (ENSSBOG00000022804) #35
Marmoset	MODERN SPECIES	19	NOTCH2 (ENSCJAG00000019931) #12	ENSCJAG00000052544	ENSCJAG00000066741	ENSCJAG00000019916 #18	HMGCS2 (ENSCJAG00000019899) #17	ENSCJAG00000046196	REG4 (ENSCJAG00000019892) #16	ENSCJAG00000085290	ZNF697 (ENSCJAG00000022909) #19	ENSCJAG00000085345	ENSCJAG00000023348	ENSCJAG00000074294	ENSCJAG00000073117	HAO2 (ENSCJAG00000005623) #21	ENSCJAG00000082873	WARS2 (ENSCJAG00000005653) #22	TBX15 (ENSCJAG00000005662) #23	ENSCJAG00000075095	ENSCJAG00000071014	ENSCJAG00000080441	SPAG17 (ENSCJAG00000076495) #24	WDR3 (ENSCJAG00000005749) #25	GDAP2 (ENSCJAG00000005808) #26	TENT5C (ENSCJAG00000039217)	MAN1A2 (ENSCJAG00000005860) #29	ENSCJAG00000074653	VTCN1 (ENSCJAG00000005878) #30	TRIM45 (ENSCJAG00000005897) #31	TTF2 (ENSCJAG00000005909) #32	CD101 (ENSCJAG00000005944) #33	PTGFRN (ENSCJAG00000005961) #34
Mas night monkey	MODERN SPECIES	775		ENSANAG00000028435	PDE4DIP (ENSANAG00000031498) #14	ENSANAG00000024321	SEC22B (ENSANAG00000022757) #13	NOTCH2 (ENSANAG00000020885) #12	ENSANAG00000029304	ENSANAG00000029050	REG4 (ENSANAG00000034580) #16	HMGCS2 (ENSANAG00000028816) #17	PHGDH (ENSANAG00000020037) #18	ZNF697 (ENSANAG00000035327) #19	ENSANAG00000027651	ENSANAG00000024099	HAO2 (ENSANAG00000027767) #21	WARS2 (ENSANAG00000023161) #22	TBX15 (ENSANAG00000031356) #23	SPAG17 (ENSANAG00000023109) #24	WDR3 (ENSANAG00000033348) #25	GDAP2 (ENSANAG00000019806) #26	TENT5C (ENSANAG00000020216)	MAN1A2 (ENSANAG00000025558) #29	VTCN1 (ENSANAG00000034173) #30	TRIM45 (ENSANAG00000020776) #31	TTF2 (ENSANAG00000020654) #32	CD101 (ENSANAG00000034882) #33	ENSANAG00000029336	PTGFRN (ENSANAG00000034823) #34	CD2 (ENSANAG00000035044) #35	IGSF3 (ENSANAG00000034335) #36	CD58 (ENSANAG00000024219)
Tarsier	MODERN SPECIES	5835																WARS2 (ENSTSYG00000013527) #22	ENSTSYG00000031216 #23	SPAG17 (ENSTSYG00000002160) #24	WDR3 (ENSTSYG00000002158) #25
Laurasiatheria	ANCESTRAL SPECIES		ENSGT01100000263570.B #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000159284 #11	ENSGT00420000029746.e.b	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a.j	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000159284 #11	ENSGT00420000029746.e.b	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Suina	ANCESTRAL SPECIES	32	ENSGT01100000263570.B.t.a #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00420000029746.e.b	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Pig	MODERN SPECIES	12	PDE4DIP (ENSSSCG00000024481) #14	ENSSSCG00000049559	SEC22B (ENSSSCG00000020964) #13	NOTCH2 (ENSSSCG00000006709) #12	ENSSSCG00000054500	ENSSSCG00000056978	ENSSSCG00000058164	ADAM30 (ENSSSCG00000006713) #15	REG4 (ENSSSCG00000040947) #16	ENSSSCG00000058639 #17	HMGCS2 (ENSSSCG00000036808) #17	PHGDH (ENSSSCG00000006717) #18	ZNF697 (ENSSSCG00000063017) #19	ENSSSCG00000006719 #20	HAO2 (ENSSSCG00000006720) #21	WARS2 (ENSSSCG00000027153) #22	ENSSSCG00000006725 #23	SPAG17 (ENSSSCG00000006726) #24	WDR3 (ENSSSCG00000006727) #25	GDAP2 (ENSSSCG00000006728) #26	ENSSSCG00000040549	TENT5C (ENSSSCG00000006729)	MAN1A2 (ENSSSCG00000006730) #29	VTCN1 (ENSSSCG00000006731) #30	ENSSSCG00000044178	TRIM45 (ENSSSCG00000006732) #31	TTF2 (ENSSSCG00000006733) #32	CD101 (ENSSSCG00000006734) #33	PTGFRN (ENSSSCG00000006735) #34	CD2 (ENSSSCG00000006736) #35	IGSF3 (ENSSSCG00000006737) #36
Chacoan peccary	MODERN SPECIES	29	ENSCWAG00000012894 #8	CHD1L (ENSCWAG00000012998) #9	FMO5 (ENSCWAG00000014798) #10	PRKAB2 (ENSCWAG00000014832) #11	ENSCWAG00000000055	PDE4DIP (ENSCWAG00000000459) #14	SEC22B (ENSCWAG00000002077) #13	NOTCH2 (ENSCWAG00000002118) #12	ADAM30 (ENSCWAG00000002169) #15	REG4 (ENSCWAG00000002183) #16	HMGCS2 (ENSCWAG00000002224) #17	PHGDH (ENSCWAG00000002289) #18	ZNF697 (ENSCWAG00000002319) #19	ENSCWAG00000002334	HAO2 (ENSCWAG00000002354) #21	WARS2 (ENSCWAG00000002377) #22	TBX15 (ENSCWAG00000002391) #23	SPAG17 (ENSCWAG00000002431) #24	WDR3 (ENSCWAG00000002500) #25	GDAP2 (ENSCWAG00000002542) #26	TENT5C (ENSCWAG00000002576)	MAN1A2 (ENSCWAG00000002585) #29	VTCN1 (ENSCWAG00000002628) #30	TRIM45 (ENSCWAG00000002677) #31	TTF2 (ENSCWAG00000002699) #32	CD101 (ENSCWAG00000002714) #33	PTGFRN (ENSCWAG00000002730) #34	ENSCWAG00000002742	IGSF3 (ENSCWAG00000002762) #36	ENSCWAG00000002786	ATP1A1 (ENSCWAG00000002813) #37
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000159284 #11	ENSGT00420000029746.e.b	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000159284 #11	ENSGT00420000029746.e.b	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Cetacea	ANCESTRAL SPECIES		ENSGT01100000263570.B.t.a #8	ENSGT00940000159402 #9	ENSGT00940000160493.f #10	ENSGT00940000159284 #11	ENSGT00940000160493.e #10	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00950000183109.c.a.a.n	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596
Odontoceti	ANCESTRAL SPECIES		ENSGT00730000110915.b #7	ENSGT01100000263570.B.t.a #8	ENSGT00940000159402 #9	ENSGT00940000160493.f #10	ENSGT00940000159284 #11	ENSGT00940000160493.e #10	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00950000183109.c.a.a.n	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00730000110915.b #7	ENSGT01100000263570.B.t.a #8	ENSGT00940000159402 #9	ENSGT00940000160493.f #10	ENSGT00940000159284 #11	ENSGT00940000160493.e.b #10	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00730000110915.b #7	ENSGT01100000263570.B.t.a #8	ENSGT00940000159402 #9	ENSGT00940000160493.f #10	ENSGT00940000159284 #11	ENSGT00940000160493.e.b #10	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00950000183109.c.a.a.m.b	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT00940000153503.a.b.w.b	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000158408	ENSGT00730000110915.b #7	ENSGT01100000263570.B.t.a #8	ENSGT00940000159402 #9	ENSGT00940000160493.f #10	ENSGT00940000159284 #11	ENSGT00940000160493.e.b #10	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00950000183109.c.a.a.m.b.c	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT00940000153503.a.b.w.b	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36
Beluga whale	MODERN SPECIES	74	BCL9 (ENSDLEG00000011971) #7	CHD1L (ENSDLEG00000010686) #9	PRKAB2 (ENSDLEG00000010556) #11	ENSDLEG00000010535 #10	ENSDLEG00000010528 #10	ENSDLEG00000010519	ENSDLEG00000010511 ##14	PDE4DIP (ENSDLEG00000009003) #14	SEC22B (ENSDLEG00000008747) #13	NOTCH2 (ENSDLEG00000008673) #12	HMGCS2 (ENSDLEG00000008595) #17	PHGDH (ENSDLEG00000008553) #18	ZNF697 (ENSDLEG00000008534) #19	ENSDLEG00000008503 #20	HAO2 (ENSDLEG00000008484) #21	WARS2 (ENSDLEG00000008432) #22	TBX15 (ENSDLEG00000008335) #23	SPAG17 (ENSDLEG00000008058) #24	WDR3 (ENSDLEG00000007988) #25	GDAP2 (ENSDLEG00000007964) #26	FAM46C (ENSDLEG00000007955)	MAN1A2 (ENSDLEG00000007933) #29	TRIM45 (ENSDLEG00000016923) #31	TTF2 (ENSDLEG00000016896) #32	ENSDLEG00000016876	CD101 (ENSDLEG00000016843) #33	PTGFRN (ENSDLEG00000016825) #34	ENSDLEG00000016812	CD2 (ENSDLEG00000016800) #35	IGSF3 (ENSDLEG00000016776) #36	CD58 (ENSDLEG00000016764)
Narwhal	MODERN SPECIES	304	BCL9 (ENSMMNG00015001709) #7	ENSMMNG00015001727 #8	CHD1L (ENSMMNG00015001842) #9	ENSMMNG00015002123 #10	PRKAB2 (ENSMMNG00015002168) #11	ENSMMNG00015002199 #10	ENSMMNG00015002274 #14	ENSMMNG00015002456 #14	SEC22B (ENSMMNG00015002608) #13	NOTCH2 (ENSMMNG00015002664) #12	ENSMMNG00015002762 #17	PHGDH (ENSMMNG00015002791) #18	ZNF697 (ENSMMNG00015002822) #19	ENSMMNG00015002833 #20	HAO2 (ENSMMNG00015002847) #21	WARS2 (ENSMMNG00015002880) #22	TBX15 (ENSMMNG00015002896) #23	SPAG17 (ENSMMNG00015002964) #24	WDR3 (ENSMMNG00015003055) #25	GDAP2 (ENSMMNG00015003116) #26	TENT5C (ENSMMNG00015003165)	MAN1A2 (ENSMMNG00015003175) #29	VTCN1 (ENSMMNG00015003230) #30	TRIM45 (ENSMMNG00015003284) #31	TTF2 (ENSMMNG00015003336) #32	ENSMMNG00015003412	CD101 (ENSMMNG00015003430) #33	PTGFRN (ENSMMNG00015003441) #34	ENSMMNG00015003468	ENSMMNG00015003481	CD2 (ENSMMNG00015003495) #35
Vaquita	MODERN SPECIES		ENSPSNG00000005153 #10	CHD1L (ENSPSNG00000004698) #9	PRKAB2 (ENSPSNG00000004433) #11	ENSPSNG00000004389 #10	ENSPSNG00000004320 #14	ENSPSNG00000004299 #14	ENSPSNG00000004164 #14	SEC22B (ENSPSNG00000004063) #13	NOTCH2 (ENSPSNG00000004012) #12	ENSPSNG00000003977 #16	ENSPSNG00000003958 #17	PHGDH (ENSPSNG00000003909) #18	ZNF697 (ENSPSNG00000003876) #19	ENSPSNG00000003865 #20	HAO2 (ENSPSNG00000003847) #21	WARS2 (ENSPSNG00000003819) #22	TBX15 (ENSPSNG00000003785) #23	SPAG17 (ENSPSNG00000003683) #24	WDR3 (ENSPSNG00000003625) #25	GDAP2 (ENSPSNG00000003591) #26	TENT5C (ENSPSNG00000003573)	MAN1A2 (ENSPSNG00000003561) #29	VTCN1 (ENSPSNG00000003497) #30	TRIM45 (ENSPSNG00000003461) #31	TTF2 (ENSPSNG00000003422) #32	ENSPSNG00000003381	CD101 (ENSPSNG00000003355) #33	PTGFRN (ENSPSNG00000003312) #34	ENSPSNG00000003294	ENSPSNG00000003280	ENSPSNG00000003272
Dolphin	MODERN SPECIES	3704																WARS2 (ENSTTRG00000000108) #22
Sperm whale	MODERN SPECIES	15	ACP6 (ENSPCTG00005013400)	BCL9 (ENSPCTG00005013534) #7	CHD1L (ENSPCTG00005013705) #9	ENSPCTG00005014550 #10	PRKAB2 (ENSPCTG00005014856) #11	ENSPCTG00005014945 #10	ENSPCTG00005015102 #10	PDE4DIP (ENSPCTG00005015314) #14	ENSPCTG00005016056 #14	SEC22B (ENSPCTG00005016111) #13	NOTCH2 (ENSPCTG00005016186) #12	PHGDH (ENSPCTG00005016270) #18	ZNF697 (ENSPCTG00005016347) #19	ENSPCTG00005016397	HAO2 (ENSPCTG00005016473) #21	WARS2 (ENSPCTG00005016663) #22	TBX15 (ENSPCTG00005016688) #23	SPAG17 (ENSPCTG00005016769) #24	WDR3 (ENSPCTG00005017311) #25	GDAP2 (ENSPCTG00005017454) #26	TENT5C (ENSPCTG00005017545)	MAN1A2 (ENSPCTG00005017570) #29	VTCN1 (ENSPCTG00005017689) #30	TRIM45 (ENSPCTG00005017746) #31	TTF2 (ENSPCTG00005017917) #32	ENSPCTG00005017986	CD101 (ENSPCTG00005018027) #33	PTGFRN (ENSPCTG00005018118) #34	CD2 (ENSPCTG00005018150) #35	IGSF3 (ENSPCTG00005018364) #36	CD58 (ENSPCTG00005018443)
Blue whale	MODERN SPECIES		ACP6 (ENSBMSG00010003521)	BCL9 (ENSBMSG00010003513) #7	CHD1L (ENSBMSG00010003302) #9	ENSBMSG00010003208 #10	PRKAB2 (ENSBMSG00010003183) #11	ENSBMSG00010003163 #10	PDE4DIP (ENSBMSG00010001649) #14	SEC22B (ENSBMSG00010001456) #13	NOTCH2 (ENSBMSG00010001428) #12	ENSBMSG00010001411 #15	HMGCS2 (ENSBMSG00010001385) #17	PHGDH (ENSBMSG00010001328) #18	ZNF697 (ENSBMSG00010001299) #19	ENSBMSG00010001282	HAO2 (ENSBMSG00010001258) #21	WARS2 (ENSBMSG00010001240) #22	TBX15 (ENSBMSG00010001214) #23	ENSBMSG00010001201	ENSBMSG00010001169 #24	WDR3 (ENSBMSG00010001140) #25	GDAP2 (ENSBMSG00010001124) #26	ENSBMSG00010001110	TENT5C (ENSBMSG00010001103)	MAN1A2 (ENSBMSG00010001075) #29	VTCN1 (ENSBMSG00010001035) #30	TRIM45 (ENSBMSG00010001017) #31	TTF2 (ENSBMSG00010000984) #32	ENSBMSG00010000968	CD101 (ENSBMSG00010000941) #33	PTGFRN (ENSBMSG00010000912) #34	CD2 (ENSBMSG00010000892) #35
Pecora	ANCESTRAL SPECIES	2	ENSGT00420000029746.e.b	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954.c.a #15	ENSGT00940000162954.c.b #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Yarkand deer	MODERN SPECIES	12	BCL9 (ENSCHYG00000005533) #7	ENSCHYG00000005572 #8	CHD1L (ENSCHYG00000005754) #9	ENSCHYG00000006443 #11	PDE4DIP (ENSCHYG00000006902) #14	SEC22B (ENSCHYG00000010779) #13	NOTCH2 (ENSCHYG00000010973) #12	ENSCHYG00000011173 #15	REG4 (ENSCHYG00000011235) #16	HMGCS2 (ENSCHYG00000011318) #17	PHGDH (ENSCHYG00000011474) #18	ZNF697 (ENSCHYG00000011608) #19	ENSCHYG00000011649 #20	HAO2 (ENSCHYG00000011716) #21	ENSCHYG00000011778	WARS2 (ENSCHYG00000011828) #22	TBX15 (ENSCHYG00000011911) #23	SPAG17 (ENSCHYG00000012111) #24	WDR3 (ENSCHYG00000012236) #25	GDAP2 (ENSCHYG00000012378) #26	TENT5C (ENSCHYG00000012566)	MAN1A2 (ENSCHYG00000012603) #29	ENSCHYG00000012828	VTCN1 (ENSCHYG00000012876) #30	TRIM45 (ENSCHYG00000013005) #31	TTF2 (ENSCHYG00000013086) #32	CD101 (ENSCHYG00000013230) #33	PTGFRN (ENSCHYG00000013321) #34	CD2 (ENSCHYG00000013421) #35	IGSF3 (ENSCHYG00000013489) #36	ENSCHYG00000013650
Percora_a	ANCESTRAL SPECIES	1	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954.c.a #15	ENSGT00940000162954.d #15	ENSGT00940000162954.c.b #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Siberian musk deer	MODERN SPECIES	98				ENSMMSG00000000186 #14	ENSMMSG00000000114	SEC22B (ENSMMSG00000000100) #13	NOTCH2 (ENSMMSG00000000075) #12	ENSMMSG00000000059 #15	ENSMMSG00000000045 #15	REG4 (ENSMMSG00000000022) #16	HMGCS2 (ENSMMSG00000013835) #17	PHGDH (ENSMMSG00000013755) #18	ZNF697 (ENSMMSG00000013724) #19	ENSMMSG00000013712 #20	HAO2 (ENSMMSG00000013690) #21	WARS2 (ENSMMSG00000013648) #22	TBX15 (ENSMMSG00000013611) #23	ENSMMSG00000013590	ENSMMSG00000013577	SPAG17 (ENSMMSG00000013419) #24	WDR3 (ENSMMSG00000013356) #25	GDAP2 (ENSMMSG00000013305) #26	TENT5C (ENSMMSG00000013288)	ENSMMSG00000013271	MAN1A2 (ENSMMSG00000013222) #29	VTCN1 (ENSMMSG00000013168) #30	TRIM45 (ENSMMSG00000013142) #31	TTF2 (ENSMMSG00000013101) #32	CD101 (ENSMMSG00000013054) #33	PTGFRN (ENSMMSG00000013024) #34	ENSMMSG00000013017
Bovidae	ANCESTRAL SPECIES	1	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954.c.a #15	ENSGT00940000162954.d #15	ENSGT00940000162954.c.b #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Bovinae	ANCESTRAL SPECIES	1	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954.c.a #15	ENSGT00940000162954.d #15	ENSGT00940000162954.c.b #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Bos	ANCESTRAL SPECIES		ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954.c.a #15	ENSGT00940000162954.d #15	ENSGT00940000162954.c.b #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000161374	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.a.a.a.a.a	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Bos_a	ANCESTRAL SPECIES	32		ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954.c.a #15	ENSGT00940000162954.d #15	ENSGT00940000162954.c.b #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.a.a.a.a.a	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Domestic yak	MODERN SPECIES	22	RWDD3 (ENSBGRG00000016161)	PDE4DIP (ENSBGRG00000013976) #14	ENSBGRG00000013889	ENSBGRG00000013856	SEC22B (ENSBGRG00000013753) #13	NOTCH2 (ENSBGRG00000013357) #12	ENSBGRG00000013234 #15	ENSBGRG00000013175 #15	REG4 (ENSBGRG00000013043) #16	HMGCS2 (ENSBGRG00000012904) #17	PHGDH (ENSBGRG00000012503) #18	ZNF697 (ENSBGRG00000012446) #19	ENSBGRG00000012402 #20	HAO2 (ENSBGRG00000012350) #21	ENSBGRG00000012328	WARS2 (ENSBGRG00000012212) #22	TBX15 (ENSBGRG00000012008) #23	SPAG17 (ENSBGRG00000011326) #24	WDR3 (ENSBGRG00000010398) #25	GDAP2 (ENSBGRG00000010327) #26	TENT5C (ENSBGRG00000010319)	ENSBGRG00000010295	MAN1A2 (ENSBGRG00000009916) #29	VTCN1 (ENSBGRG00000009691) #30	TRIM45 (ENSBGRG00000009569) #31	TTF2 (ENSBGRG00000009266) #32	CD101 (ENSBGRG00000009173) #33	PTGFRN (ENSBGRG00000009035) #34	ENSBGRG00000008942 #35	ENSBGRG00000008897	IGSF3 (ENSBGRG00000008798) #36
Wild yak	MODERN SPECIES	709				PDE4DIP (ENSBMUG00000012201) #14	SEC22B (ENSBMUG00000012316) #13	NOTCH2 (ENSBMUG00000012357) #12	ENSBMUG00000012392 #15	ENSBMUG00000012400 #15	ENSBMUG00000012408 #15	REG4 (ENSBMUG00000012427) #16	HMGCS2 (ENSBMUG00000012453) #17	PHGDH (ENSBMUG00000012563) #18	ZNF697 (ENSBMUG00000012663) #19	ENSBMUG00000012673	HAO2 (ENSBMUG00000012689) #21	WARS2 (ENSBMUG00000012704) #22	TBX15 (ENSBMUG00000012717) #23	SPAG17 (ENSBMUG00000012756) #24	WDR3 (ENSBMUG00000012791) #25	GDAP2 (ENSBMUG00000012812) #26	ENSBMUG00000012825	TENT5C (ENSBMUG00000012850)
Bos_b	ANCESTRAL SPECIES	1	ENSGT00420000029746.e.b.c	ENSGT00420000029746.e.b.d	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954.d #15	ENSGT00940000162954.c.b #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.a.a.a.a.a	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693.a #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Hybrid Bos Indicus	MODERN SPECIES	22	ENSBIXG00005003967	ENSBIXG00005023144	PDE4DIP (ENSBIXG00005022871) #14	SEC22B (ENSBIXG00005022367) #13	NOTCH2 (ENSBIXG00005022312) #12	ENSBIXG00005022285 #15	ENSBIXG00005003789 #15	REG4 (ENSBIXG00005007763) #16	HMGCS2 (ENSBIXG00005022195) #17	PHGDH (ENSBIXG00005022089) #18	ZNF697 (ENSBIXG00005021978) #19	ENSBIXG00005021962	ENSBIXG00005021936 #20	HAO2 (ENSBIXG00005021914) #21	ENSBIXG00005021892	WARS2 (ENSBIXG00005021872) #22	TBX15 (ENSBIXG00005007374) #23	ENSBIXG00005021669 #24	WDR3 (ENSBIXG00005003644) #25	GDAP2 (ENSBIXG00005007307) #26	MAN1A2 (ENSBIXG00005021491) #29	ENSBIXG00005021170	VTCN1 (ENSBIXG00005003569) #30	TRIM45 (ENSBIXG00005006265) #31	TTF2 (ENSBIXG00005020946) #32	CD101 (ENSBIXG00005005743) #33	PTGFRN (ENSBIXG00005020799) #34	CD2 (ENSBIXG00005020730) #35	IGSF3 (ENSBIXG00005003497) #36	ENSBIXG00005020612	ENSBIXG00005003478
Cow	MODERN SPECIES	22	ENSBTAG00000051677	PRKAB2 (ENSBTAG00000014387) #11	ENSBTAG00000052039	PDE4DIP (ENSBTAG00000001564) #14	ENSBTAG00000017316	SEC22B (ENSBTAG00000007712) #13	NOTCH2 (ENSBTAG00000007909) #12	ENSBTAG00000046315 #15	ENSBTAG00000046293 #15	REG4 (ENSBTAG00000032193) #16	HMGCS2 (ENSBTAG00000003898) #17	PHGDH (ENSBTAG00000039719) #18	ZNF697 (ENSBTAG00000032187) #19	HSD3B1 (ENSBTAG00000006769) #20	HAO2 (ENSBTAG00000000123) #21	WARS2 (ENSBTAG00000005064) #22	TBX15 (ENSBTAG00000007767) #23	ENSBTAG00000048491	SPAG17 (ENSBTAG00000001080) #24	WDR3 (ENSBTAG00000019937) #25	GDAP2 (ENSBTAG00000016387) #26	ENSBTAG00000051931	TENT5C (ENSBTAG00000046509)	MAN1A2 (ENSBTAG00000003586) #29	VTCN1 (ENSBTAG00000014466) #30	TRIM45 (ENSBTAG00000001748) #31	TTF2 (ENSBTAG00000015392) #32	CD101 (ENSBTAG00000018203) #33	PTGFRN (ENSBTAG00000008022) #34	CD2 (ENSBTAG00000017256) #35	IGSF3 (ENSBTAG00000004849) #36
American bison	MODERN SPECIES	3164											HMGCS2 (ENSBBBG00000006886) #17	PHGDH (ENSBBBG00000008752) #18	ZNF697 (ENSBBBG00000016456) #19	ENSBBBG00000016454	HAO2 (ENSBBBG00000016443) #21	WARS2 (ENSBBBG00000004064) #22	TBX15 (ENSBBBG00000004062) #23
Caprinae	ANCESTRAL SPECIES	2	ENSGT01100000263570.B.t.b #8	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954.c.a #15	ENSGT00940000162954.d #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020002501	ENSOARG00020002495	ENSOARG00020002490	ENSOARG00020002482	ENSOARG00020002454	PDE4DIP (ENSOARG00020001810) #14	SEC22B (ENSOARG00020001722) #13	NOTCH2 (ENSOARG00020001563) #12	ADAM30 (ENSOARG00020001541) #15	REG4 (ENSOARG00020001515) #16	HMGCS2 (ENSOARG00020001485) #17	PHGDH (ENSOARG00020001394) #18	ZNF697 (ENSOARG00020001371) #19	HSD3B1 (ENSOARG00020001361) #20	HAO2 (ENSOARG00020001334) #21	WARS2 (ENSOARG00020001286) #22	TBX15 (ENSOARG00020001253) #23	ENSOARG00020001200	WDR3 (ENSOARG00020001170) #25	GDAP2 (ENSOARG00020001139) #26	TENT5C (ENSOARG00020001120)	MAN1A2 (ENSOARG00020001101) #29	VTCN1 (ENSOARG00020001040) #30	TRIM45 (ENSOARG00020001002) #31	TTF2 (ENSOARG00020000877) #32	PTGFRN (ENSOARG00020000811) #34	CD2 (ENSOARG00020000791) #35	IGSF3 (ENSOARG00020000764) #36	ENSOARG00020000743	ENSOARG00020000728	ATP1A1 (ENSOARG00020000332) #37
Goat	MODERN SPECIES	22	ENSCHIG00000022455 #8	ENSCHIG00000026995 #8	CHD1L (ENSCHIG00000013871) #9	FMO5 (ENSCHIG00000014242) #10	PRKAB2 (ENSCHIG00000015966) #11	PDE4DIP (ENSCHIG00000010241) #14	SEC22B (ENSCHIG00000010105) #13	NOTCH2 (ENSCHIG00000022464) #12	ADAM30 (ENSCHIG00000027182) #15	REG4 (ENSCHIG00000015183) #16	HMGCS2 (ENSCHIG00000025654) #17	PHGDH (ENSCHIG00000018423) #18	ZNF697 (ENSCHIG00000014100) #19	3BHSD (ENSCHIG00000020217) #20	HAO2 (ENSCHIG00000026466) #21	WARS2 (ENSCHIG00000013499) #22	TBX15 (ENSCHIG00000014427) #23	ENSCHIG00000014484	SPAG17 (ENSCHIG00000014664) #24	WDR3 (ENSCHIG00000010490) #25	GDAP2 (ENSCHIG00000019563) #26	TENT5C (ENSCHIG00000005579)	MAN1A2 (ENSCHIG00000013056) #29	VTCN1 (ENSCHIG00000019630) #30	ENSCHIG00000007372	TRIM45 (ENSCHIG00000018385) #31	TTF2 (ENSCHIG00000020785) #32	CD101 (ENSCHIG00000025123) #33	PTGFRN (ENSCHIG00000017906) #34	CD2 (ENSCHIG00000023355) #35	IGSF3 (ENSCHIG00000003902) #36
Camelidae	ANCESTRAL SPECIES	29			ENSGT00940000159284 #11	ENSGT00420000029746.e.b	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954.e #15	ENSGT00940000162954.f #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000164746	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596
Arabian camel	MODERN SPECIES	35	PRKAB2 (ENSCDRG00005001847) #11	ENSCDRG00005001864	PDE4DIP (ENSCDRG00005001996) #14	SEC22B (ENSCDRG00005002623) #13	NOTCH2 (ENSCDRG00005002643) #12	ENSCDRG00005002687 #15	ENSCDRG00005002701 #15	REG4 (ENSCDRG00005002721) #16	HMGCS2 (ENSCDRG00005002749) #17	PHGDH (ENSCDRG00005002792) #18	ZNF697 (ENSCDRG00005002866) #19	ENSCDRG00005002880 #20	ENSCDRG00005002892	HAO2 (ENSCDRG00005002914) #21	ENSCDRG00005002937	WARS2 (ENSCDRG00005002953) #22	TBX15 (ENSCDRG00005002975) #23	ENSCDRG00005003000	SPAG17 (ENSCDRG00005003031) #24	WDR3 (ENSCDRG00005003128) #25	GDAP2 (ENSCDRG00005003149) #26	TENT5C (ENSCDRG00005003158)	MAN1A2 (ENSCDRG00005003168) #29	VTCN1 (ENSCDRG00005003199) #30	TRIM45 (ENSCDRG00005003250) #31	ENSCDRG00005003266	CD101 (ENSCDRG00005003285) #33	PTGFRN (ENSCDRG00005003307) #34	CD2 (ENSCDRG00005003335) #35	IGSF3 (ENSCDRG00005003359) #36	ENSCDRG00005003393
Alpaca	MODERN SPECIES	3132																WARS2 (ENSVPAG00000010266) #22	TBX15 (ENSVPAG00000010265) #23
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00420000029746.e.b.h.a	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a.j	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596
Carnivora	ANCESTRAL SPECIES	1	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00420000029746.e.b.h.a	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a.j	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596
Caniformia	ANCESTRAL SPECIES	2						ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a.j	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00950000185829	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00950000185047	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35
Caniformia_b	ANCESTRAL SPECIES	1						ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a.j	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00950000185829	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00950000185047	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35
Ursidae	ANCESTRAL SPECIES	32						ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a.j.h.b	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00950000185829	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00950000185047	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000164746	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35
Ursus	ANCESTRAL SPECIES	107						ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT01100000263543.a.j.h.b	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00950000185047	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000164746	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36
Polar bear	MODERN SPECIES	288						ENSUMAG00000025645 #14	ENSUMAG00000025646 #14	SEC22B (ENSUMAG00000025648) #13	NOTCH2 (ENSUMAG00000025650) #12	ADAM30 (ENSUMAG00000000101) #15	REG4 (ENSUMAG00000000264) #16	HMGCS2 (ENSUMAG00000000336) #17	PHGDH (ENSUMAG00000000360) #18	ENSUMAG00000000404 #20	HAO2 (ENSUMAG00000000433) #21	WARS2 (ENSUMAG00000000553) #22	TBX15 (ENSUMAG00000000567) #23	ENSUMAG00000000573	ENSUMAG00000000594 #24
American black bear	MODERN SPECIES	6870																ENSUAMG00000028300 #22
Giant Panda	MODERN SPECIES	11	ACP6 (ENSAMEG00000017466)	BCL9 (ENSAMEG00000017456) #7	ENSAMEG00000020293 #8	FMO5 (ENSAMEG00000017038) #10	CHD1L (ENSAMEG00000017063) #9	ENSAMEG00000017027 #11	ENSAMEG00000017614 #12	ADAM30 (ENSAMEG00000019275) #15	REG4 (ENSAMEG00000030784) #16	ENSAMEG00000026581	HMGCS2 (ENSAMEG00000017661) #17	PHGDH (ENSAMEG00000017669) #18	ENSAMEG00000025329 #19	ENSAMEG00000017684 #20	HAO2 (ENSAMEG00000017691) #21	WARS2 (ENSAMEG00000008147) #22	TBX15 (ENSAMEG00000008160) #23	SPAG17 (ENSAMEG00000004302) #24	WDR3 (ENSAMEG00000004339) #25	GDAP2 (ENSAMEG00000004394) #26	ENSAMEG00000024849	TENT5C (ENSAMEG00000019061)	MAN1A2 (ENSAMEG00000004421) #29	ENSAMEG00000029843	VTCN1 (ENSAMEG00000005256) #30	TRIM45 (ENSAMEG00000005240) #31	ENSAMEG00000005220	CD101 (ENSAMEG00000005212) #33	PTGFRN (ENSAMEG00000005188) #34	ENSAMEG00000005177	IGSF3 (ENSAMEG00000005171) #36
Mustelinae	ANCESTRAL SPECIES	47						ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Ferret	MODERN SPECIES	323				ENSMPUG00000001378	ENSMPUG00000001381	PDE4DIP (ENSMPUG00000001386) #14	SEC22B (ENSMPUG00000001397) #13	NOTCH2 (ENSMPUG00000001399) #12	ADAM30 (ENSMPUG00000019385) #15	REG4 (ENSMPUG00000001409) #16	HMGCS2 (ENSMPUG00000001448) #17	PHGDH (ENSMPUG00000001454) #18	ZNF697 (ENSMPUG00000001459) #19	ENSMPUG00000001463 #20	HAO2 (ENSMPUG00000001491) #21	WARS2 (ENSMPUG00000001541) #22	TBX15 (ENSMPUG00000001549) #23	SPAG17 (ENSMPUG00000001553) #24	WDR3 (ENSMPUG00000001565) #25	GDAP2 (ENSMPUG00000001575) #26	TENT5C (ENSMPUG00000001581)	MAN1A2 (ENSMPUG00000001585) #29	VTCN1 (ENSMPUG00000001593) #30	TRIM45 (ENSMPUG00000001600) #31	ENSMPUG00000001606	CD101 (ENSMPUG00000001621) #33	PTGFRN (ENSMPUG00000001624) #34	CD2 (ENSMPUG00000001627) #35	IGSF3 (ENSMPUG00000001629) #36	ENSMPUG00000001632	ATP1A1 (ENSMPUG00000001638) #37
American mink	MODERN SPECIES	600																SYWM (ENSNVIG00000003699) #22	TBX15 (ENSNVIG00000003713) #23
Canidae	ANCESTRAL SPECIES	25				ENSGT00950000183190.a.a.b #14	ENSGT00940000153169.A.b.b.a.a.a.b.l.h	ENSGT00950000186084	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954.h #15	ENSGT00940000161011.b #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00950000185829	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00950000185047.a.a	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000164746	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00940000161011.a #16	ENSGT00940000162954.g #15	ENSGT00950000186084	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954.h #15	ENSGT00940000161011.b #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863.q #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00950000185829	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00950000185047.a.a	ENSGT00940000157300 #30	ENSGT00950000183010.a.a.a.b.a.a.a.a.a	ENSGT00940000154334.k #31	ENSGT00940000169805	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35
Dingo	MODERN SPECIES	223	ENSCAFG00020020218 #18	ENSCAFG00020020260 #14	ENSCAFG00020020276 #14	ENSCAFG00020020292 #14	ENSCAFG00020020304	SEC22B (ENSCAFG00020020305) #13	ENSCAFG00020020320 #12	ENSCAFG00020020406 #12	ENSCAFG00020020416 #18	ENSCAFG00020020458 #16	HMGCS2 (ENSCAFG00020020467) #17	ENSCAFG00020020479 #18	ZNF697 (ENSCAFG00020020535) #19	ENSCAFG00020020537 #20	HAO2 (ENSCAFG00020020545) #21	WARS2 (ENSCAFG00020020570) #22	TBX15 (ENSCAFG00020020577) #23	ENSCAFG00020020597 #24	WDR3 (ENSCAFG00020020610) #25	ENSCAFG00020020626	GDAP2 (ENSCAFG00020020644) #26	ENSCAFG00020020651	TENT5C (ENSCAFG00020020652)	MAN1A2 (ENSCAFG00020020664) #29	ENSCAFG00020020761	VTCN1 (ENSCAFG00020020764) #30	ENSCAFG00020020767	TRIM45 (ENSCAFG00020020769) #31	ENSCAFG00020020772	CD101 (ENSCAFG00020020782) #33	PTGFRN (ENSCAFG00020020784) #34
Dog	MODERN SPECIES	8	ENSCAFG00845008699 #15	ENSCAFG00845008609 #18	ENSCAFG00845008556	ENSCAFG00845008064 #14	ENSCAFG00845007848	ENSCAFG00845007734 #13	NOTCH2 (ENSCAFG00845007331) #12	ENSCAFG00845007183 #15	ENSCAFG00845007114 #16	HMGCS2 (ENSCAFG00845006979) #17	ENSCAFG00845006590 #18	ENSCAFG00845006411	ZNF697 (ENSCAFG00845006387) #19	HSD3B2 (ENSCAFG00845006351) #20	HAO2 (ENSCAFG00845006278) #21	WARS2 (ENSCAFG00845006189) #22	TBX15 (ENSCAFG00845006079) #23	SPAG17 (ENSCAFG00845005984) #24	WDR3 (ENSCAFG00845005942) #25	GDAP2 (ENSCAFG00845005877) #26	TENT5C (ENSCAFG00845005783)	MAN1A2 (ENSCAFG00845029509) #29	ENSCAFG00845029463	VTCN1 (ENSCAFG00845029358) #30	ENSCAFG00845029291	TRIM45 (ENSCAFG00845029248) #31	ENSCAFG00845029143	CD101 (ENSCAFG00845029071) #33	PTGFRN (ENSCAFG00845029002) #34	CD2 (ENSCAFG00845028984) #35	IGSF3 (ENSCAFG00845028936) #36
Red fox	MODERN SPECIES	16											ENSVVUG00000010825	ENSVVUG00000010822	ZNF697 (ENSVVUG00000010812) #19	ENSVVUG00000010799 #20	HAO2 (ENSVVUG00000010784) #21	WARS2 (ENSVVUG00000010766) #22	TBX15 (ENSVVUG00000010760) #23	SPAG17 (ENSVVUG00000010690) #24	WDR3 (ENSVVUG00000010629) #25	GDAP2 (ENSVVUG00000010473) #26	ENSVVUG00000010463	TENT5C (ENSVVUG00000010460)	MAN1A2 (ENSVVUG00000010442) #29	ENSVVUG00000010433	VTCN1 (ENSVVUG00000010432) #30	TRIM45 (ENSVVUG00000010421) #31	TTF2 (ENSVVUG00000010407)	CD101 (ENSVVUG00000010401) #33	PTGFRN (ENSVVUG00000010390) #34	CD2 (ENSVVUG00000010381) #35	IGSF3 (ENSVVUG00000010362) #36
Felidae	ANCESTRAL SPECIES	10	ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00420000029746.e.b.h.a	ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Panthera	ANCESTRAL SPECIES	4						ENSGT00950000183190.a.a.b #14	ENSGT00670000098708	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000164746	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Panthera_a	ANCESTRAL SPECIES	11							ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000164746	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
leopard	MODERN SPECIES	31					ENSPPRG00000004060 #14	ENSPPRG00000005578 #14	ENSPPRG00000006640	SEC22B (ENSPPRG00000006928) #13	NOTCH2 (ENSPPRG00000009066) #12	REG4 (ENSPPRG00000009446) #16	HMGCS2 (ENSPPRG00000010177) #17	PHGDH (ENSPPRG00000012658) #18	ZNF697 (ENSPPRG00000013640) #19	ENSPPRG00000013982 #20	HAO2 (ENSPPRG00000016364) #21	WARS2 (ENSPPRG00000017754) #22	TBX15 (ENSPPRG00000020309) #23	SPAG17 (ENSPPRG00000023948) #24	WDR3 (ENSPPRG00000022972) #25	GDAP2 (ENSPPRG00000000210) #26	TENT5C (ENSPPRG00000016270)	MAN1A2 (ENSPPRG00000000605) #29	VTCN1 (ENSPPRG00000001120) #30	TRIM45 (ENSPPRG00000001987) #31	ENSPPRG00000002352	CD101 (ENSPPRG00000003135) #33	PTGFRN (ENSPPRG00000003305) #34	CD2 (ENSPPRG00000003530) #35	IGSF3 (ENSPPRG00000004364) #36	ATP1A1 (ENSPPRG00000008177) #37	MAB21L3 (ENSPPRG00000008518)
lion	MODERN SPECIES	8	S100A10 (ENSPLOG00000009560)	ENSPLOG00000009583	TCHHL1 (ENSPLOG00000009612)	ENSPLOG00000009645	RPTN (ENSPLOG00000009684)	ENSPLOG00000009717	PDE4DIP (ENSPLOG00000009882) #14	SEC22B (ENSPLOG00000010603) #13	NOTCH2 (ENSPLOG00000010680) #12	REG4 (ENSPLOG00000010847) #16	HMGCS2 (ENSPLOG00000010925) #17	PHGDH (ENSPLOG00000011111) #18	ZNF697 (ENSPLOG00000011563) #19	ENSPLOG00000011592 #20	HAO2 (ENSPLOG00000011694) #21	WARS2 (ENSPLOG00000011821) #22	TBX15 (ENSPLOG00000011860) #23	SPAG17 (ENSPLOG00000012093) #24	WDR3 (ENSPLOG00000012483) #25	GDAP2 (ENSPLOG00000012658) #26	ENSPLOG00000012701	TENT5C (ENSPLOG00000012735)	MAN1A2 (ENSPLOG00000012755) #29	VTCN1 (ENSPLOG00000012889) #30	TRIM45 (ENSPLOG00000013060) #31	ENSPLOG00000013203	CD101 (ENSPLOG00000013429) #33	PTGFRN (ENSPLOG00000013463) #34	CD2 (ENSPLOG00000013510) #35	IGSF3 (ENSPLOG00000013549) #36	ENSPLOG00000013611
Tiger	MODERN SPECIES	63				ENSPTIG00000012730 #14	ENSPTIG00000019579 #14	ENSPTIG00000018548 #14	ENSPTIG00000018371	SEC22B (ENSPTIG00000017942) #13	NOTCH2 (ENSPTIG00000014724) #12	REG4 (ENSPTIG00000013579) #16	HMGCS2 (ENSPTIG00000011965) #17	PHGDH (ENSPTIG00000004897) #18	ZNF697 (ENSPTIG00000002818) #19	ENSPTIG00000000014 #20	HAO2 (ENSPTIG00000021750) #21	WARS2 (ENSPTIG00000021158) #22	TBX15 (ENSPTIG00000020538) #23	SPAG17 (ENSPTIG00000018997) #24	WDR3 (ENSPTIG00000016747) #25	GDAP2 (ENSPTIG00000015029) #26	TENT5C (ENSPTIG00000007350)	MAN1A2 (ENSPTIG00000013526) #29	VTCN1 (ENSPTIG00000012535) #30	TRIM45 (ENSPTIG00000010832) #31	ENSPTIG00000009300	CD101 (ENSPTIG00000006886) #33	PTGFRN (ENSPTIG00000003580) #34	CD2 (ENSPTIG00000001453) #35
Cat	MODERN SPECIES	239	ENSFCAG00000033242 #8	CHD1L (ENSFCAG00000007777) #9	FMO5 (ENSFCAG00000013037) #10	PRKAB2 (ENSFCAG00000038678) #11	ENSFCAG00000051298	PDE4DIP (ENSFCAG00000028868) #14	SEC22B (ENSFCAG00000022013) #13	NOTCH2 (ENSFCAG00000009649) #12	REG4 (ENSFCAG00000038303) #16	HMGCS2 (ENSFCAG00000011475) #17	PHGDH (ENSFCAG00000011474) #18	ZNF697 (ENSFCAG00000026025) #19	ENSFCAG00000048538	HSD3B2 (ENSFCAG00000025160) #20	HAO2 (ENSFCAG00000002698) #21	WARS2 (ENSFCAG00000007370) #22	TBX15 (ENSFCAG00000043861) #23	ENSFCAG00000011531 #24	WDR3 (ENSFCAG00000003469) #25	GDAP2 (ENSFCAG00000003468) #26	TENT5C (ENSFCAG00000022444)	MAN1A2 (ENSFCAG00000019000) #29	VTCN1 (ENSFCAG00000009689) #30	TRIM45 (ENSFCAG00000005204) #31	TTF2 (ENSFCAG00000001981) #32	CD101 (ENSFCAG00000001979) #33	ENSFCAG00000051359	PTGFRN (ENSFCAG00000001977) #34	CD2 (ENSFCAG00000001976) #35	IGSF3 (ENSFCAG00000011343) #36	CD58 (ENSFCAG00000025590)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000159402 #9	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00420000029746.e.b.h.a	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Equus	ANCESTRAL SPECIES	3	ENSGT00940000160493 #10	ENSGT00940000159284 #11	ENSGT00420000029746.e.b.h.a.a.a	ENSGT00950000183190.a.a.b #14	ENSGT00940000156349 #13	ENSGT00940000155030 #12	ENSGT00940000162954 #15	ENSGT00940000161011 #16	ENSGT00420000029746.e.b.h.a.a.b.b.b.b	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000163677.a.b.a.b	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000165376	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Horse	MODERN SPECIES	26	CHD1L (ENSECAG00000008915) #9	FMO5 (ENSECAG00000019741) #10	PRKAB2 (ENSECAG00000020796) #11	ENSECAG00000036385	PDE4DIP (ENSECAG00000022891) #14	SEC22B (ENSECAG00000014055) #13	NOTCH2 (ENSECAG00000015266) #12	ENSECAG00000042755 #16	ENSECAG00000035708	HMGCS2 (ENSECAG00000000589) #17	PHGDH (ENSECAG00000005228) #18	ZNF697 (ENSECAG00000031539) #19	ENSECAG00000030759	HSD3B2 (ENSECAG00000014483) #20	HAO2 (ENSECAG00000059835) #21	WARS2 (ENSECAG00000021622) #22	TBX15 (ENSECAG00000023325) #23	SPAG17 (ENSECAG00000024156) #24	WDR3 (ENSECAG00000006575) #25	GDAP2 (ENSECAG00000014270) #26	TENT5C (ENSECAG00000019626)	MAN1A2 (ENSECAG00000019681) #29	VTCN1 (ENSECAG00000008749) #30	TRIM45 (ENSECAG00000010259) #31	TTF2 (ENSECAG00000012474)	CD101 (ENSECAG00000017048) #33	PTGFRN (ENSECAG00000017101) #34	IGSF3 (ENSECAG00000022378) #36	CD2 (ENSECAG00000019437) #35	ENSECAG00000057106	ENSECAG00000056436
Donkey	MODERN SPECIES	7				ENSEASG00005007133 #14	ENSEASG00005007009 #13	ENSEASG00005006436 #12	ENSEASG00005006415 #15	ENSEASG00005033653 #16	ENSEASG00005028726	HMGCS2 (ENSEASG00005006411) #17	PHGDH (ENSEASG00005006410) #18	ZNF697 (ENSEASG00005006409) #19	ENSEASG00005037316	ENSEASG00005006408 #20	HAO2 (ENSEASG00005006405) #21	WARS2 (ENSEASG00005024683) #22	TBX15 (ENSEASG00005006401) #23	SPAG17 (ENSEASG00005024790) #24	WDR3 (ENSEASG00005006393) #25	GDAP2 (ENSEASG00005006392) #26	TENT5C (ENSEASG00005033293)	MAN1A2 (ENSEASG00005006389) #29	VTCN1 (ENSEASG00005006388) #30	TRIM45 (ENSEASG00005006386) #31	ENSEASG00005006374	CD101 (ENSEASG00005006367) #33	PTGFRN (ENSEASG00005006364) #34	CD2 (ENSEASG00005006361) #35	IGSF3 (ENSEASG00005006358) #36	ENSEASG00005006357	ATP1A1 (ENSEASG00005006353) #37
Chiroptera	ANCESTRAL SPECIES	38										ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Megabat	MODERN SPECIES	110																WARS2 (ENSPVAG00000001920) #22
Microchiroptera	ANCESTRAL SPECIES	35										ENSGT00940000161011 #16	ENSGT00390000006096.a.a #17	ENSGT00940000155863 #18	ENSGT00820000127150 #19	ENSGT00940000155444 #20	ENSGT00390000018717.b.a.b #21	ENSGT00940000153724.A #22	ENSGT00940000159013 #23	ENSGT00390000013693 #24	ENSGT00940000153859.a #25	ENSGT00940000156336 #26	ENSGT00940000158856	ENSGT00940000157498 #29	ENSGT00940000157300 #30	ENSGT00940000154334.k #31	ENSGT00940000162718 #32	ENSGT00940000161722 #33	ENSGT00940000158367 #34	ENSGT01030000234540.E #35	ENSGT00940000155177.b #36	ENSGT00510000049596	ENSGT00940000154840.b #37
Greater horseshoe bat	MODERN SPECIES	14	ENSRFEG00010015720 #10	ENSRFEG00010015393 #10	ENSRFEG00010015308 #10	PRKAB2 (ENSRFEG00010015269) #11	ENSRFEG00010015240	ENSRFEG00010011108 #14	ENSRFEG00010010887 #14	SEC22B (ENSRFEG00010010861) #13	NOTCH2 (ENSRFEG00010010773) #12	ENSRFEG00010010683 #15	REG4 (ENSRFEG00010019493) #16	HMGCS2 (ENSRFEG00010019427) #17	ENSRFEG00010019349 #18	ZNF697 (ENSRFEG00010019306) #19	ENSRFEG00010019185 #20	WARS2 (ENSRFEG00010019131) #22	TBX15 (ENSRFEG00010019084) #23	SPAG17 (ENSRFEG00010018691) #24	WDR3 (ENSRFEG00010018610) #25	GDAP2 (ENSRFEG00010018562) #26	TENT5C (ENSRFEG00010018543)	MAN1A2 (ENSRFEG00010018506) #29	VTCN1 (ENSRFEG00010018302) #30	TRIM45 (ENSRFEG00010018200) #31	ENSRFEG00010018175	ENSRFEG00010018150	CD101 (ENSRFEG00010018120) #33	PTGFRN (ENSRFEG00010018081) #34	CD2 (ENSRFEG00010018050) #35	IGSF3 (ENSRFEG00010017979) #36	ENSRFEG00010017926
Microbat	MODERN SPECIES	1140	VTCN1 (ENSMLUG00000013927) #30	MAN1A2 (ENSMLUG00000014231) #29	TENT5C (ENSMLUG00000014236)	GDAP2 (ENSMLUG00000003494) #26	WDR3 (ENSMLUG00000003500) #25	PDE4DIP (ENSMLUG00000012437) #14	SEC22B (ENSMLUG00000025411) #13	NOTCH2 (ENSMLUG00000003023) #12	ADAM30 (ENSMLUG00000005957) #15	REG4 (ENSMLUG00000003014) #16	HMGCS2 (ENSMLUG00000003004) #17	PHGDH (ENSMLUG00000002986) #18	ZNF697 (ENSMLUG00000014249) #19	ENSMLUG00000002982 #20	HAO2 (ENSMLUG00000002972) #21	WARS2 (ENSMLUG00000002965) #22	TBX15 (ENSMLUG00000002958) #23	ENSMLUG00000025065	SPAG17 (ENSMLUG00000000696) #24	ENSMLUG00000028155	ENSMLUG00000028511
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000153724.A #22
Common shrew	MODERN SPECIES	11431																WARS2 (ENSSARG00000011146) #22
Hedgehog	MODERN SPECIES	1854																WARS2 (ENSEEUG00000002792) #22