Theria	ANCESTRAL SPECIES	40	ENSGT01030000234598.a.a.a	ENSGT00940000161784	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000154388.f	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b	ENSGT00940000153249.b.d	ENSGT00940000156601
Eutheria	ANCESTRAL SPECIES	39	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Primates	ANCESTRAL SPECIES	13	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00940000156342	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00940000156342	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Hominidae	ANCESTRAL SPECIES	17	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147607	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT00910000148902	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147607	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT00910000148902	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147607	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Human	DUPLICATION
Human	MODERN SPECIES	11	ASB1 (ENSG00000065802) #7	TWIST2 (ENSG00000233608) #8	HDAC4 (ENSG00000068024) #9	NDUFA10 (ENSG00000130414) #10	OR6B2 (ENSG00000182083) #11	OR6B3 (ENSG00000178586) #12	COPS9 (ENSG00000172428) #13	OTOS (ENSG00000178602) #14	GPC1 (ENSG00000063660) #15	ANKMY1 (ENSG00000144504) #16	DUSP28 (ENSG00000188542) #17	RNPEPL1 (ENSG00000142327) #18	CAPN10 (ENSG00000142330) #19	GPR35 (ENSG00000178623) #20	AQP12B (ENSG00000185176) #21	AQP12A (ENSG00000184945) #22	KIF1A (ENSG00000130294) #23	AGXT (ENSG00000172482) #24	MAB21L4 (ENSG00000172478) #25	CROCC2 (ENSG00000226321) #26	SNED1 (ENSG00000162804) #27	MTERF4 (ENSG00000122085) #28	PASK (ENSG00000115687) #29	PPP1R7 (ENSG00000115685) #30	ANO7 (ENSG00000146205) #31	HDLBP (ENSG00000115677) #32	SEPTIN2 (ENSG00000168385) #33	FARP2 (ENSG00000006607) #34	STK25 (ENSG00000115694) #35	BOK (ENSG00000176720) #36	THAP4 (ENSG00000176946) #37
Human	MODERN SPECIES	11	BOK (ENSG00000176720) #36	STK25 (ENSG00000115694) #35	FARP2 (ENSG00000006607) #34	SEPTIN2 (ENSG00000168385) #33	HDLBP (ENSG00000115677) #32	ANO7 (ENSG00000146205) #31	PPP1R7 (ENSG00000115685) #30	PASK (ENSG00000115687) #29	MTERF4 (ENSG00000122085) #28	SNED1 (ENSG00000162804) #27	CROCC2 (ENSG00000226321) #26	MAB21L4 (ENSG00000172478) #25	AGXT (ENSG00000172482) #24	KIF1A (ENSG00000130294) #23	AQP12A (ENSG00000184945) #22	AQP12B (ENSG00000185176) #21	GPR35 (ENSG00000178623) #20	CAPN10 (ENSG00000142330) #19	RNPEPL1 (ENSG00000142327) #18	DUSP28 (ENSG00000188542) #17	ANKMY1 (ENSG00000144504) #16	GPC1 (ENSG00000063660) #15	OTOS (ENSG00000178602) #14	COPS9 (ENSG00000172428) #13	OR6B3 (ENSG00000178586) #12	OR6B2 (ENSG00000182083) #11	NDUFA10 (ENSG00000130414) #10	HDAC4 (ENSG00000068024) #9	TWIST2 (ENSG00000233608) #8	ASB1 (ENSG00000065802) #7	TRAF3IP1 (ENSG00000204104)
Pan	ANCESTRAL SPECIES	12	ENSGT00940000153969.b #7	ENSGT00940000157440 #9	ENSGT01100000266980	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT00910000148902	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147607	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	15	FARP2 (ENSPTRG00000013123) #34	SEPTIN2 (ENSPTRG00000023481) #33	ENSPTRG00000048829	HDLBP (ENSPTRG00000013121) #32	ANO7 (ENSPTRG00000013119) #31	PPP1R7 (ENSPTRG00000013118) #30	PASK (ENSPTRG00000013117) #29	MTERF4 (ENSPTRG00000013116) #28	SNED1 (ENSPTRG00000013115) #27	CROCC2 (ENSPTRG00000041321) #26	MAB21L4 (ENSPTRG00000013114) #25	AGXT (ENSPTRG00000013113) #24	ENSPTRG00000046079	KIF1A (ENSPTRG00000013112) #23	ENSPTRG00000048988 #22	ENSPTRG00000043091 #22	GPR35 (ENSPTRG00000028943) #20	CAPN10 (ENSPTRG00000013108) #19	RNPEPL1 (ENSPTRG00000013107) #18	DUSP28 (ENSPTRG00000051613) #17	ANKMY1 (ENSPTRG00000013105) #16	GPC1 (ENSPTRG00000045317) #15	OTOS (ENSPTRG00000013103) #14	COPS9 (ENSPTRG00000013102) #13	NDUFA10 (ENSPTRG00000013099) #10	ENSPTRG00000040855	HDAC4 (ENSPTRG00000013097) #9	ASB1 (ENSPTRG00000049853) #7	TRAF3IP1 (ENSPTRG00000028947)	PER2 (ENSPTRG00000013092)	HES6 (ENSPTRG00000043334)
Chimpanzee	MODERN SPECIES	15	PER2 (ENSPTRG00000013092)	TRAF3IP1 (ENSPTRG00000028947)	ASB1 (ENSPTRG00000049853) #7	HDAC4 (ENSPTRG00000013097) #9	ENSPTRG00000040855	NDUFA10 (ENSPTRG00000013099) #10	COPS9 (ENSPTRG00000013102) #13	OTOS (ENSPTRG00000013103) #14	GPC1 (ENSPTRG00000045317) #15	ANKMY1 (ENSPTRG00000013105) #16	DUSP28 (ENSPTRG00000051613) #17	RNPEPL1 (ENSPTRG00000013107) #18	CAPN10 (ENSPTRG00000013108) #19	GPR35 (ENSPTRG00000028943) #20	ENSPTRG00000043091 #22	ENSPTRG00000048988 #22	KIF1A (ENSPTRG00000013112) #23	ENSPTRG00000046079	AGXT (ENSPTRG00000013113) #24	MAB21L4 (ENSPTRG00000013114) #25	CROCC2 (ENSPTRG00000041321) #26	SNED1 (ENSPTRG00000013115) #27	MTERF4 (ENSPTRG00000013116) #28	PASK (ENSPTRG00000013117) #29	PPP1R7 (ENSPTRG00000013118) #30	ANO7 (ENSPTRG00000013119) #31	HDLBP (ENSPTRG00000013121) #32	ENSPTRG00000048829	SEPTIN2 (ENSPTRG00000023481) #33	FARP2 (ENSPTRG00000013123) #34	STK25 (ENSPTRG00000013125) #35
Bonobo	MODERN SPECIES	15	TRAF3IP1 (ENSPPAG00000034877)	ASB1 (ENSPPAG00000037555) #7	HDAC4 (ENSPPAG00000035780) #9	ENSPPAG00000014240	ENSPPAG00000037987 #10	OR6B2 (ENSPPAG00000005084) #11	OR6B3 (ENSPPAG00000032545) #12	ENSPPAG00000039796 #13	OTOS (ENSPPAG00000027930) #14	ENSPPAG00000035071	GPC1 (ENSPPAG00000036753) #15	ANKMY1 (ENSPPAG00000020736) #16	ENSPPAG00000035565 #18	CAPN10 (ENSPPAG00000031063) #19	GPR35 (ENSPPAG00000041284) #20	ENSPPAG00000042962 #22	ENSPPAG00000027852	ENSPPAG00000029702	KIF1A (ENSPPAG00000024628) #23	AGXT (ENSPPAG00000027443) #24	MAB21L4 (ENSPPAG00000040432) #25	CROCC2 (ENSPPAG00000034255) #26	SNED1 (ENSPPAG00000037340) #27	MTERF4 (ENSPPAG00000041007) #28	PASK (ENSPPAG00000035044) #29	PPP1R7 (ENSPPAG00000040077) #30	ANO7 (ENSPPAG00000043317) #31	HDLBP (ENSPPAG00000023318) #32	ENSPPAG00000038175	SEPTIN2 (ENSPPAG00000034127) #33	FARP2 (ENSPPAG00000041862) #34
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	15	FARP2 (ENSGGOG00000004259) #34	SEPTIN2 (ENSGGOG00000004597) #33	HDLBP (ENSGGOG00000004392) #32	ANO7 (ENSGGOG00000004380) #31	PPP1R7 (ENSGGOG00000012805) #30	PASK (ENSGGOG00000012790) #29	MTERF4 (ENSGGOG00000036917) #28	SNED1 (ENSGGOG00000012750) #27	CROCC2 (ENSGGOG00000041336) #26	MAB21L4 (ENSGGOG00000004020) #25	AGXT (ENSGGOG00000014690) #24	ENSGGOG00000043179	KIF1A (ENSGGOG00000013469) #23	ENSGGOG00000036196	ENSGGOG00000027009 #22	ENSGGOG00000013461 #22	GPR35 (ENSGGOG00000026708) #20	CAPN10 (ENSGGOG00000001489) #19	RNPEPL1 (ENSGGOG00000001484) #18	DUSP28 (ENSGGOG00000040849) #17	ANKMY1 (ENSGGOG00000001478) #16	GPC1 (ENSGGOG00000001475) #15	ENSGGOG00000041362	OTOS (ENSGGOG00000005393) #14	COPS9 (ENSGGOG00000005387) #13	OR6B2 (ENSGGOG00000015878) #11	NDUFA10 (ENSGGOG00000001432) #10	HDAC4 (ENSGGOG00000014323) #9	ENSGGOG00000012588 #7	TRAF3IP1 (ENSGGOG00000010361)	PER2 (ENSGGOG00000004542)
Gorilla	MODERN SPECIES	15	TRAF3IP1 (ENSGGOG00000010361)	ENSGGOG00000012588 #7	HDAC4 (ENSGGOG00000014323) #9	NDUFA10 (ENSGGOG00000001432) #10	OR6B2 (ENSGGOG00000015878) #11	COPS9 (ENSGGOG00000005387) #13	OTOS (ENSGGOG00000005393) #14	ENSGGOG00000041362	GPC1 (ENSGGOG00000001475) #15	ANKMY1 (ENSGGOG00000001478) #16	DUSP28 (ENSGGOG00000040849) #17	RNPEPL1 (ENSGGOG00000001484) #18	CAPN10 (ENSGGOG00000001489) #19	GPR35 (ENSGGOG00000026708) #20	ENSGGOG00000013461 #22	ENSGGOG00000027009 #22	ENSGGOG00000036196	KIF1A (ENSGGOG00000013469) #23	ENSGGOG00000043179	AGXT (ENSGGOG00000014690) #24	MAB21L4 (ENSGGOG00000004020) #25	CROCC2 (ENSGGOG00000041336) #26	SNED1 (ENSGGOG00000012750) #27	MTERF4 (ENSGGOG00000036917) #28	PASK (ENSGGOG00000012790) #29	PPP1R7 (ENSGGOG00000012805) #30	ANO7 (ENSGGOG00000004380) #31	HDLBP (ENSGGOG00000004392) #32	SEPTIN2 (ENSGGOG00000004597) #33	FARP2 (ENSGGOG00000004259) #34	ENSGGOG00000004267 #35
Orangutan	DUPLICATION
Orangutan	MODERN SPECIES	15	FARP2 (ENSPPYG00000013354) #34	SEPTIN2 (ENSPPYG00000013353) #33	HDLBP (ENSPPYG00000013351) #32	ANO7 (ENSPPYG00000013350) #31	PPP1R7 (ENSPPYG00000013349) #30	PASK (ENSPPYG00000013348) #29	MTERF4 (ENSPPYG00000013347) #28	SNED1 (ENSPPYG00000013346) #27	CROCC2 (ENSPPYG00000036734) #26	MAB21L4 (ENSPPYG00000013345) #25	AGXT (ENSPPYG00000030682) #24	KIF1A (ENSPPYG00000013343) #23	ENSPPYG00000039791	ENSPPYG00000039693 #22	ENSPPYG00000040193	ENSPPYG00000013384 #22	GPR35 (ENSPPYG00000013341) #20	CAPN10 (ENSPPYG00000013340) #19	RNPEPL1 (ENSPPYG00000013339) #18	DUSP28 (ENSPPYG00000030765) #17	ANKMY1 (ENSPPYG00000013337) #16	GPC1 (ENSPPYG00000013336) #15	OTOS (ENSPPYG00000013335) #14	ENSPPYG00000039891 #13	OR6B2 (ENSPPYG00000013333) #11	NDUFA10 (ENSPPYG00000013332) #10	HDAC4 (ENSPPYG00000013328) #9	TWIST2 (ENSPPYG00000039133) #8	ASB1 (ENSPPYG00000013326) #7	TRAF3IP1 (ENSPPYG00000013325)	PER2 (ENSPPYG00000013324)
Orangutan	MODERN SPECIES	15	ASB1 (ENSPPYG00000013326) #7	TWIST2 (ENSPPYG00000039133) #8	HDAC4 (ENSPPYG00000013328) #9	NDUFA10 (ENSPPYG00000013332) #10	OR6B2 (ENSPPYG00000013333) #11	ENSPPYG00000039891 #13	OTOS (ENSPPYG00000013335) #14	GPC1 (ENSPPYG00000013336) #15	ANKMY1 (ENSPPYG00000013337) #16	DUSP28 (ENSPPYG00000030765) #17	RNPEPL1 (ENSPPYG00000013339) #18	CAPN10 (ENSPPYG00000013340) #19	GPR35 (ENSPPYG00000013341) #20	ENSPPYG00000013384 #22	ENSPPYG00000040193	ENSPPYG00000039693 #22	ENSPPYG00000039791	KIF1A (ENSPPYG00000013343) #23	AGXT (ENSPPYG00000030682) #24	MAB21L4 (ENSPPYG00000013345) #25	CROCC2 (ENSPPYG00000036734) #26	SNED1 (ENSPPYG00000013346) #27	MTERF4 (ENSPPYG00000013347) #28	PASK (ENSPPYG00000013348) #29	PPP1R7 (ENSPPYG00000013349) #30	ANO7 (ENSPPYG00000013350) #31	HDLBP (ENSPPYG00000013351) #32	SEPTIN2 (ENSPPYG00000013353) #33	FARP2 (ENSPPYG00000013354) #34	STK25 (ENSPPYG00000025879) #35	BOK (ENSPPYG00000013355) #36
Gibbon	MODERN SPECIES	14	ENSNLEG00000032222	ENSNLEG00000027732	PER2 (ENSNLEG00000011250)	TRAF3IP1 (ENSNLEG00000011298)	ASB1 (ENSNLEG00000011336) #7	TWIST2 (ENSNLEG00000011342) #8	HDAC4 (ENSNLEG00000013474) #9	ENSNLEG00000013509 #10	COPS9 (ENSNLEG00000030619) #13	OTOS (ENSNLEG00000013565) #14	ENSNLEG00000013571 #15	ANKMY1 (ENSNLEG00000013573) #16	DUSP28 (ENSNLEG00000013588) #17	RNPEPL1 (ENSNLEG00000013589) #18	CAPN10 (ENSNLEG00000013631) #19	ENSNLEG00000013685 #22	ENSNLEG00000035307	KIF1A (ENSNLEG00000036232) #23	AGXT (ENSNLEG00000013694) #24	ENSNLEG00000013707 #25	CROCC2 (ENSNLEG00000029188) #26	SNED1 (ENSNLEG00000013708) #27	MTERF4 (ENSNLEG00000013727) #28	PASK (ENSNLEG00000013731) #29	PPP1R7 (ENSNLEG00000013766) #30	ANO7 (ENSNLEG00000013806) #31	HDLBP (ENSNLEG00000013818) #32	SEPTIN2 (ENSNLEG00000013873) #33	FARP2 (ENSNLEG00000013956) #34	STK25 (ENSNLEG00000013968) #35	BOK (ENSNLEG00000007762) #36
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00910000147677	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00910000147677	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00910000147677	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00510000050415.C	ENSGT00940000174573	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00910000147677	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00510000050415.C	ENSGT00940000174573	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Pig-tailed macaque	MODERN SPECIES	525	ENSMNEG00000034335	TWIST2 (ENSMNEG00000028131) #8	HDAC4 (ENSMNEG00000033168) #9	NDUFA10 (ENSMNEG00000021553) #10	ENSMNEG00000044929	ENSMNEG00000040555 #13	OTOS (ENSMNEG00000039552) #14	GPC1 (ENSMNEG00000002512) #15	ENSMNEG00000004238	ANKMY1 (ENSMNEG00000031190) #16	DUSP28 (ENSMNEG00000003681) #17	RNPEPL1 (ENSMNEG00000037037) #18	CAPN10 (ENSMNEG00000027814) #19	GPR35 (ENSMNEG00000015349) #20	ENSMNEG00000032577	ENSMNEG00000031349 #22	KIF1A (ENSMNEG00000036707) #23	AGXT (ENSMNEG00000039228) #24	MAB21L4 (ENSMNEG00000034905) #25	CROCC2 (ENSMNEG00000029986) #26	SNED1 (ENSMNEG00000042251) #27	MTERF4 (ENSMNEG00000040061) #28	PASK (ENSMNEG00000030367) #29	ENSMNEG00000005914	ANO7 (ENSMNEG00000033411) #31	HDLBP (ENSMNEG00000024260) #32	SEPTIN2 (ENSMNEG00000004313) #33	ENSMNEG00000013427	FARP2 (ENSMNEG00000030159) #34	STK25 (ENSMNEG00000000451) #35	BOK (ENSMNEG00000029533) #36
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00910000147677	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00510000050415.C	ENSGT00940000174573	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Crab-eating macaque	MODERN SPECIES	3	TRAF3IP1 (ENSMFAG00000002763)	ASB1 (ENSMFAG00000038837) #7	HDAC4 (ENSMFAG00000033242) #9	NDUFA10 (ENSMFAG00000001486) #10	COPS9 (ENSMFAG00000000784) #13	OR6B3 (ENSMFAG00000054218) #12	OTOS (ENSMFAG00000038320) #14	GPC1 (ENSMFAG00000032000) #15	ANKMY1 (ENSMFAG00000014439) #16	ENSMFAG00000030856	RNPEPL1 (ENSMFAG00000038176) #18	CAPN10 (ENSMFAG00000031448) #19	ENSMFAG00000048512 #20	ENSMFAG00000048748	ENSMFAG00000051250	ENSMFAG00000036051 #22	ENSMFAG00000014109	KIF1A (ENSMFAG00000038236) #23	AGXT (ENSMFAG00000041893) #24	MAB21L4 (ENSMFAG00000041210) #25	ENSMFAG00000054710 #27	ENSMFAG00000001771 #27	MTERF4 (ENSMFAG00000026775) #28	PASK (ENSMFAG00000037737) #29	ENSMFAG00000038150	ANO7 (ENSMFAG00000001859) #31	HDLBP (ENSMFAG00000033641) #32	SEPTIN2 (ENSMFAG00000039700) #33	FARP2 (ENSMFAG00000044112) #34	STK25 (ENSMFAG00000044279) #35	BOK (ENSMFAG00000000539) #36
Rhesus	MODERN SPECIES	3	ASB1 (ENSMMUG00000009511) #7	TWIST2 (ENSMMUG00000021909) #8	HDAC4 (ENSMMUG00000006077) #9	NDUFA10 (ENSMMUG00000010382) #10	OR6B2 (ENSMMUG00000010383) #11	OR6B3 (ENSMMUG00000049471) #12	OTOS (ENSMMUG00000056837) #14	GPC1 (ENSMMUG00000056083) #15	ANKMY1 (ENSMMUG00000014835) #16	DUSP28 (ENSMMUG00000037810) #17	RNPEPL1 (ENSMMUG00000015625) #18	CAPN10 (ENSMMUG00000015628) #19	GPR35 (ENSMMUG00000015419) #20	ENSMMUG00000062821	ENSMMUG00000061756	AQP12 (ENSMMUG00000031103) #22	KIF1A (ENSMMUG00000021802) #23	AGXT (ENSMMUG00000023435) #24	MAB21L4 (ENSMMUG00000011416) #25	CROCC2 (ENSMMUG00000041795) #26	SNED1 (ENSMMUG00000004968) #27	MTERF4 (ENSMMUG00000006835) #28	PASK (ENSMMUG00000016207) #29	PPP1R7 (ENSMMUG00000016209)	ANO7 (ENSMMUG00000001721) #31	HDLBP (ENSMMUG00000004730) #32	SEPTIN2 (ENSMMUG00000004736) #33	FARP2 (ENSMMUG00000001313) #34	STK25 (ENSMMUG00000001314) #35	BOK (ENSMMUG00000056380) #36	THAP4 (ENSMMUG00000005662) #37
Cercopithecinae_b	ANCESTRAL SPECIES	60														ENSGT00510000050415.C	ENSGT00940000174573	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00390000018318.u.b.a.a.o	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Olive baboon	MODERN SPECIES	1	BOK (ENSPANG00000034368) #36	STK25 (ENSPANG00000010069) #35	FARP2 (ENSPANG00000019972) #34	SEPTIN2 (ENSPANG00000007917) #33	HDLBP (ENSPANG00000011832) #32	ENSPANG00000046499 #31	ENSPANG00000009640	PASK (ENSPANG00000021941) #29	MTERF4 (ENSPANG00000014465) #28	SNED1 (ENSPANG00000012985) #27	MAB21L4 (ENSPANG00000013759) #25	AGXT (ENSPANG00000019415) #24	KIF1A (ENSPANG00000024239) #23	ENSPANG00000048005	ENSPANG00000045273	ENSPANG00000020307 #22	GPR35 (ENSPANG00000007268) #20	CAPN10 (ENSPANG00000015218) #19	RNPEPL1 (ENSPANG00000024377) #18	ENSPANG00000043078 #17	ANKMY1 (ENSPANG00000015840) #16	GPC1 (ENSPANG00000024475) #15	ENSPANG00000048629	OTOS (ENSPANG00000013766) #14	COPS9 (ENSPANG00000032848) #13	ENSPANG00000039926	OR6B3 (ENSPANG00000009568) #12	OR6B2 (ENSPANG00000037043) #11	NDUFA10 (ENSPANG00000017314) #10	ENSPANG00000047989	HDAC4 (ENSPANG00000001165) #9
Cercopithecinae_d	ANCESTRAL SPECIES	158															ENSGT00510000050415.C	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00390000018318.u.b.a.a.o	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Sooty mangabey	MODERN SPECIES	107	STK25 (ENSCATG00000044719) #35	FARP2 (ENSCATG00000032346) #34	SEPTIN2 (ENSCATG00000033533) #33	HDLBP (ENSCATG00000039363) #32	ANO7 (ENSCATG00000037143) #31	ENSCATG00000016069	PASK (ENSCATG00000039320) #29	MTERF4 (ENSCATG00000021725) #28	SNED1 (ENSCATG00000014152) #27	CROCC2 (ENSCATG00000043230) #26	MAB21L4 (ENSCATG00000000794) #25	AGXT (ENSCATG00000008694) #24	KIF1A (ENSCATG00000037667) #23	ENSCATG00000020561	ENSCATG00000042321	ENSCATG00000032057 #22	GPR35 (ENSCATG00000038596) #20	CAPN10 (ENSCATG00000037502) #19	RNPEPL1 (ENSCATG00000042322) #18	DUSP28 (ENSCATG00000045199) #17	ANKMY1 (ENSCATG00000016475) #16	GPC1 (ENSCATG00000031393) #15	OTOS (ENSCATG00000040686) #14	COPS9 (ENSCATG00000040196) #13	NDUFA10 (ENSCATG00000030083) #10	ENSCATG00000001546	HDAC4 (ENSCATG00000035774) #9	TWIST2 (ENSCATG00000021169) #8	ASB1 (ENSCATG00000039506) #7	TRAF3IP1 (ENSCATG00000031689)	PER2 (ENSCATG00000029774)
Drill	MODERN SPECIES	1204																ENSMLEG00000039524 #22	ENSMLEG00000016441	KIF1A (ENSMLEG00000005316) #23	AGXT (ENSMLEG00000034965) #24	MAB21L4 (ENSMLEG00000041870) #25	CROCC2 (ENSMLEG00000036528) #26	SNED1 (ENSMLEG00000031237) #27	MTERF4 (ENSMLEG00000035945) #28	PASK (ENSMLEG00000042258) #29	ENSMLEG00000033467	ANO7 (ENSMLEG00000004758) #31	HDLBP (ENSMLEG00000042734) #32	SEPTIN2 (ENSMLEG00000043469) #33	ENSMLEG00000019175	ENSMLEG00000000708	FARP2 (ENSMLEG00000031088) #34
Vervet Monkey	MODERN SPECIES	1	STK25 (ENSCSAG00000005762) #35	FARP2 (ENSCSAG00000005767) #34	SEPTIN2 (ENSCSAG00000005773) #33	HDLBP (ENSCSAG00000005781) #32	ANO7 (ENSCSAG00000005815) #31	ENSCSAG00000005841	PASK (ENSCSAG00000005843) #29	MTERF4 (ENSCSAG00000005845) #28	SNED1 (ENSCSAG00000005891) #27	ENSCSAG00000005915	ENSCSAG00000005919 #26	MAB21L4 (ENSCSAG00000005921) #25	AGXT (ENSCSAG00000005927) #24	KIF1A (ENSCSAG00000005934) #23	ENSCSAG00000005941	ENSCSAG00000005945 #22	GPR35 (ENSCSAG00000018807) #20	CAPN10 (ENSCSAG00000005947) #19	RNPEPL1 (ENSCSAG00000005950) #18	DUSP28 (ENSCSAG00000005952) #17	ANKMY1 (ENSCSAG00000005962) #16	GPC1 (ENSCSAG00000005972) #15	OTOS (ENSCSAG00000005977) #14	OR6B3 (ENSCSAG00000018806) #12	OR6B2 (ENSCSAG00000018803) #11	NDUFA10 (ENSCSAG00000005983) #10	ENSCSAG00000005986	HDAC4 (ENSCSAG00000006011) #9	TWIST2 (ENSCSAG00000018801) #8	ASB1 (ENSCSAG00000006016) #7	TRAF3IP1 (ENSCSAG00000006023)
Rhinopithecus	ANCESTRAL SPECIES	45	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00910000147607	ENSGT00510000050415.C	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT00910000147677	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT00390000016151.m #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000154185.l.a.b.d	ENSGT00940000153969.b #7
Black snub-nosed monkey	MODERN SPECIES	2132			FARP2 (ENSRBIG00000032798) #34	SEPTIN2 (ENSRBIG00000032420) #33	HDLBP (ENSRBIG00000041381) #32	ANO7 (ENSRBIG00000032598) #31	ENSRBIG00000020885	PASK (ENSRBIG00000034208) #29	MTERF4 (ENSRBIG00000035413) #28	SNED1 (ENSRBIG00000037462) #27	MAB21L4 (ENSRBIG00000041268) #25	AGXT (ENSRBIG00000039948) #24	KIF1A (ENSRBIG00000033952) #23	ENSRBIG00000041407	ENSRBIG00000039215	ENSRBIG00000039030 #22	CAPN10 (ENSRBIG00000033107) #19	RNPEPL1 (ENSRBIG00000043916) #18	DUSP28 (ENSRBIG00000037723) #17	ANKMY1 (ENSRBIG00000044573) #16
Golden snub-nosed monkey	MODERN SPECIES	3347																ENSRROG00000033165 #22	GPR35 (ENSRROG00000040367) #20	CAPN10 (ENSRROG00000041695) #19	RNPEPL1 (ENSRROG00000029998) #18	DUSP28 (ENSRROG00000019423) #17	ANKMY1 (ENSRROG00000035663) #16	ENSRROG00000022577	GPC1 (ENSRROG00000029900) #15
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Cebidae	ANCESTRAL SPECIES	11	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059.s #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b.a #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Capuchin	MODERN SPECIES	443	BOK (ENSCCAG00000028486) #36	STK25 (ENSCCAG00000021446) #35	FARP2 (ENSCCAG00000025705) #34	ENSCCAG00000034359	SEPTIN2 (ENSCCAG00000031252) #33	ENSCCAG00000023361 #32	ANO7 (ENSCCAG00000033209) #31	PPP1R7 (ENSCCAG00000025668) #30	PASK (ENSCCAG00000026306) #29	MTERF4 (ENSCCAG00000028780) #28	SNED1 (ENSCCAG00000027118) #27	CROCC2 (ENSCCAG00000027162) #26	MAB21L4 (ENSCCAG00000029712) #25	AGXT (ENSCCAG00000028181) #24	KIF1A (ENSCCAG00000027377) #23	ENSCCAG00000030373 #22	GPR35 (ENSCCAG00000022914) #20	CAPN10 (ENSCCAG00000037048) #19	RNPEPL1 (ENSCCAG00000034926) #18	DUSP28 (ENSCCAG00000038079) #17	ANKMY1 (ENSCCAG00000024339) #16	GPC1 (ENSCCAG00000035734) #15
Bolivian squirrel monkey	MODERN SPECIES	128	BOK (ENSSBOG00000024648) #36	STK25 (ENSSBOG00000027024) #35	FARP2 (ENSSBOG00000034642) #34	SEPTIN2 (ENSSBOG00000016731) #33	ENSSBOG00000029714 #32	ANO7 (ENSSBOG00000028401) #31	ENSSBOG00000001483 #30	PASK (ENSSBOG00000029892) #29	MTERF4 (ENSSBOG00000025209) #28	SNED1 (ENSSBOG00000034978) #27	CROCC2 (ENSSBOG00000031400) #26	ENSSBOG00000025032	AGXT (ENSSBOG00000036014) #24	ENSSBOG00000032208	KIF1A (ENSSBOG00000022876) #23	ENSSBOG00000003192 #22	GPR35 (ENSSBOG00000025234) #20	CAPN10 (ENSSBOG00000027896) #19	RNPEPL1 (ENSSBOG00000034450) #18	DUSP28 (ENSSBOG00000035216) #17	ANKMY1 (ENSSBOG00000025649) #16	GPC1 (ENSSBOG00000025749) #15	OTOS (ENSSBOG00000015724) #14	ENSSBOG00000032572	ENSSBOG00000032512 #12	NDUFA10 (ENSSBOG00000034900) #10	HDAC4 (ENSSBOG00000027074) #9	TWIST2 (ENSSBOG00000004261) #8	ASB1 (ENSSBOG00000023503) #7	TRAF3IP1 (ENSSBOG00000029375)	PER2 (ENSSBOG00000033356)
Marmoset	MODERN SPECIES	18	BOK (ENSCJAG00000000544) #36	STK25 (ENSCJAG00000006066) #35	FARP2 (ENSCJAG00000006087) #34	ENSCJAG00000006122 #33	HDLBP (ENSCJAG00000006152) #32	ANO7 (ENSCJAG00000064163) #31	PPP1R7 (ENSCJAG00000006275) #30	PASK (ENSCJAG00000073377) #29	MTERF4 (ENSCJAG00000006346) #28	SNED1 (ENSCJAG00000006352) #27	CROCC2 (ENSCJAG00000075544) #26	MAB21L4 (ENSCJAG00000006386) #25	AGXT (ENSCJAG00000006403) #24	ENSCJAG00000087306	KIF1A (ENSCJAG00000006425) #23	ENSCJAG00000083345 #22	GPR35 (ENSCJAG00000022936) #20	CAPN10 (ENSCJAG00000006565) #19	RNPEPL1 (ENSCJAG00000006582) #18	DUSP28 (ENSCJAG00000006583) #17	ANKMY1 (ENSCJAG00000054585) #16	GPC1 (ENSCJAG00000019058) #15	OTOS (ENSCJAG00000019076) #14	COPS9 (ENSCJAG00000061577) #13	ENSCJAG00000022267 #12	NDUFA10 (ENSCJAG00000019091) #10	HDAC4 (ENSCJAG00000009423) #9	TWIST2 (ENSCJAG00000023006) #8	ASB1 (ENSCJAG00000000414) #7	ENSCJAG00000072137	TRAF3IP1 (ENSCJAG00000000419)
Mas night monkey	MODERN SPECIES	971		STK25 (ENSANAG00000035720) #35	FARP2 (ENSANAG00000034380) #34	ENSANAG00000027256	SEPTIN2 (ENSANAG00000023789) #33	HDLBP (ENSANAG00000020545) #32	ANO7 (ENSANAG00000020358) #31	PPP1R7 (ENSANAG00000033142) #30	PASK (ENSANAG00000024785) #29	MTERF4 (ENSANAG00000026147) #28	SNED1 (ENSANAG00000031412) #27	CROCC2 (ENSANAG00000021788) #26	MAB21L4 (ENSANAG00000024760) #25	AGXT (ENSANAG00000032149) #24	KIF1A (ENSANAG00000024946) #23	ENSANAG00000028502 #22	GPR35 (ENSANAG00000031970) #20	CAPN10 (ENSANAG00000022730) #19	RNPEPL1 (ENSANAG00000019926) #18	DUSP28 (ENSANAG00000018201) #17	ENSANAG00000022451 #16	GPC1 (ENSANAG00000034257) #15	OTOS (ENSANAG00000024628) #14	COPS9 (ENSANAG00000028873) #13	ENSANAG00000032986 #12	NDUFA10 (ENSANAG00000000503) #10	ENSANAG00000022498	ENSANAG00000025509
Tarsier	MODERN SPECIES	3521														AGXT (ENSTSYG00000000390) #24	KIF1A (ENSTSYG00000011394) #23	ENSTSYG00000029201 #22	CAPN10 (ENSTSYG00000008626) #19	RNPEPL1 (ENSTSYG00000012375) #18	DUSP28 (ENSTSYG00000004931) #17	ENSTSYG00000034035 #16
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00940000156342	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00940000156342	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Lemuriformes_a	ANCESTRAL SPECIES	80	ENSGT00940000156342	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.b #30	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Coquerels sifaka	MODERN SPECIES	894												ENSPCOG00000017285 #16	DUSP28 (ENSPCOG00000025402) #17	RNPEPL1 (ENSPCOG00000014304) #18	CAPN10 (ENSPCOG00000017565) #19	ENSPCOG00000018454 #22	KIF1A (ENSPCOG00000016994) #23	AGXT (ENSPCOG00000009042) #24	MAB21L4 (ENSPCOG00000017404) #25	CROCC2 (ENSPCOG00000021643) #26	SNED1 (ENSPCOG00000015668) #27	MTERF4 (ENSPCOG00000014892) #28	ENSPCOG00000018169 #29	ENSPCOG00000001306	ENSPCOG00000020645
Mouse lemur	MODERN SPECIES	30	TRAF3IP1 (ENSMICG00000004727)	ASB1 (ENSMICG00000004736) #7	ENSMICG00000043732	TWIST2 (ENSMICG00000034572) #8	HDAC4 (ENSMICG00000000164) #9	NDUFA10 (ENSMICG00000028653) #10	ENSMICG00000045168 #12	ENSMICG00000033890 #12	COPS9 (ENSMICG00000043528) #13	OTOS (ENSMICG00000035278) #14	GPC1 (ENSMICG00000037890) #15	ANKMY1 (ENSMICG00000047966) #16	DUSP28 (ENSMICG00000028755) #17	RNPEPL1 (ENSMICG00000028767) #18	CAPN10 (ENSMICG00000013040) #19	ENSMICG00000030448 #22	KIF1A (ENSMICG00000034158) #23	AGXT (ENSMICG00000036652) #24	MAB21L4 (ENSMICG00000009170) #25	SNED1 (ENSMICG00000012979) #27	MTERF4 (ENSMICG00000044756) #28	PASK (ENSMICG00000013010) #29	ENSMICG00000017782	HDLBP (ENSMICG00000004569) #32	SEPTIN2 (ENSMICG00000000909) #33	FARP2 (ENSMICG00000012071) #34	STK25 (ENSMICG00000012111) #35	BOK (ENSMICG00000029950) #36	THAP4 (ENSMICG00000016452) #37	ATG4B (ENSMICG00000013114)	ENSMICG00000042660
Bushbaby	MODERN SPECIES	248	ASB1 (ENSOGAG00000008075) #7	TWIST2 (ENSOGAG00000029007) #8	HDAC4 (ENSOGAG00000004929) #9	NDUFA10 (ENSOGAG00000005023) #10	ENSOGAG00000034791	COPS9 (ENSOGAG00000025113) #13	OTOS (ENSOGAG00000027090) #14	ENSOGAG00000032614	GPC1 (ENSOGAG00000001678) #15	ANKMY1 (ENSOGAG00000016152) #16	ENSOGAG00000027421	DUSP28 (ENSOGAG00000031083) #17	RNPEPL1 (ENSOGAG00000005146) #18	ENSOGAG00000024283	CAPN10 (ENSOGAG00000015717) #19	ENSOGAG00000014372 #22	KIF1A (ENSOGAG00000015550) #23	AGXT (ENSOGAG00000010081) #24	MAB21L4 (ENSOGAG00000006915) #25	CROCC2 (ENSOGAG00000024629) #26	SNED1 (ENSOGAG00000000732) #27	MTERF4 (ENSOGAG00000024565) #28	PASK (ENSOGAG00000000734) #29	ENSOGAG00000000735	HDLBP (ENSOGAG00000000738) #32	SEPTIN2 (ENSOGAG00000004457) #33	ENSOGAG00000008540 #34	ENSOGAG00000034190	STK25 (ENSOGAG00000008543) #35	BOK (ENSOGAG00000026580) #36	THAP4 (ENSOGAG00000024821) #37
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Glires	ANCESTRAL SPECIES	14	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Rodentia	ANCESTRAL SPECIES	14	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT01090000260024.A.a.a.b.b.b.a.a.b	ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.a	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Muroidea	ANCESTRAL SPECIES	20	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400.b #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400.b #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Golden Hamster	MODERN SPECIES	686										Gpc1 (ENSMAUG00000016065) #15	Ankmy1 (ENSMAUG00000019495) #16	Dusp28 (ENSMAUG00000016571) #17	ENSMAUG00000009570 #18	Capn10 (ENSMAUG00000014973) #19	Gpr35 (ENSMAUG00000015555) #20	Aqp12 (ENSMAUG00000013737) #22	Kif1a (ENSMAUG00000010053) #23	Agxt (ENSMAUG00000009685) #24	Mab21l4 (ENSMAUG00000001120) #25	Crocc2 (ENSMAUG00000019614) #26	Sned1 (ENSMAUG00000017367) #27	Mterf4 (ENSMAUG00000000081) #28	Pask (ENSMAUG00000018648) #29	ENSMAUG00000013558 #30	Ano7 (ENSMAUG00000013132) #31	Hdlbp (ENSMAUG00000017743) #32	ENSMAUG00000011950 #33	Farp2 (ENSMAUG00000013770) #34	Stk25 (ENSMAUG00000009418) #35	Bok (ENSMAUG00000011149) #36	ENSMAUG00000009008 #37
Chinese hamster chok1gshd	MODERN SPECIES	1	Or6b3 (ENSCGRG00001009820) ##12	Or9s23 (ENSCGRG00001010591)	ENSCGRG00001024695	Or9s27 (ENSCGRG00001010630)	ENSCGRG00001009865	Or9s14 (ENSCGRG00001024692)	ENSCGRG00001010578	ENSCGRG00001004954 #13	Otos (ENSCGRG00001024726) #14	Gpc1 (ENSCGRG00001010716) #15	Ankmy1 (ENSCGRG00001010749) #16	Dusp28 (ENSCGRG00001001800) #17	Rnpepl1 (ENSCGRG00001024714) #18	Capn10 (ENSCGRG00001024705) #19	Gpr35 (ENSCGRG00001010428) #20	Aqp12 (ENSCGRG00001010769) #22	Kif1a (ENSCGRG00001009776) #23	Agxt (ENSCGRG00001004811) #24	Mab21l4 (ENSCGRG00001002563) #25	Crocc2 (ENSCGRG00001010820) #26	Sned1 (ENSCGRG00001002826) #27	Mterf4 (ENSCGRG00001006818) #28	Pask (ENSCGRG00001024785) #29	ENSCGRG00001001852 #30	Ano7 (ENSCGRG00001006513) #31	Hdlbp (ENSCGRG00001006086) #32	ENSCGRG00001009996 #33	Farp2 (ENSCGRG00001003923) #34	Stk25 (ENSCGRG00001005671) #35	Bok (ENSCGRG00001024808) #36	Thap4 (ENSCGRG00001002632) #37
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400.b #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Prairie vole	MODERN SPECIES	354	Spag16 (ENSMOCG00000017743)	Vwc2l (ENSMOCG00000007279)	Bard1 (ENSMOCG00000017289)	Abca12 (ENSMOCG00000014923)	ENSMOCG00000003338	Atic (ENSMOCG00000015771)	Fn1 (ENSMOCG00000022262)	ENSMOCG00000020221	ENSMOCG00000010518 #13	Otos (ENSMOCG00000009370) #14	Gpc1 (ENSMOCG00000000952) #15	Ankmy1 (ENSMOCG00000001016) #16	Dusp28 (ENSMOCG00000020145) #17	Rnpepl1 (ENSMOCG00000001687) #18	Capn10 (ENSMOCG00000016869) #19	Aqp12 (ENSMOCG00000005420) #22	Kif1a (ENSMOCG00000003062) #23	Agxt (ENSMOCG00000002293) #24	Mab21l4 (ENSMOCG00000001573) #25	Crocc2 (ENSMOCG00000017827) #26	Sned1 (ENSMOCG00000002594) #27	Mterf4 (ENSMOCG00000010203) #28	Pask (ENSMOCG00000016982) #29	ENSMOCG00000012798	Ano7 (ENSMOCG00000000907) #31	Hdlbp (ENSMOCG00000006679) #32	ENSMOCG00000014906 #33	Farp2 (ENSMOCG00000021782) #34	Stk25 (ENSMOCG00000017547) #35	Bok (ENSMOCG00000016270) #36	ENSMOCG00000014492 #37
Northern American deer mouse	MODERN SPECIES	4	ENSPEMG00000000810 #10	Or9s23 (ENSPEMG00000024929)	Or9s27 (ENSPEMG00000025002)	ENSPEMG00000029408	ENSPEMG00000030762	Or9s14 (ENSPEMG00000028583)	ENSPEMG00000024906	ENSPEMG00000031336 #13	Otos (ENSPEMG00000017821) #14	Gpc1 (ENSPEMG00000015202) #15	Ankmy1 (ENSPEMG00000007716) #16	Dusp28 (ENSPEMG00000027177) #17	Rnpepl1 (ENSPEMG00000011698) #18	Capn10 (ENSPEMG00000010924) #19	Gpr35 (ENSPEMG00000024361) #20	Aqp12 (ENSPEMG00000013245) #22	Kif1a (ENSPEMG00000002901) #23	Agxt (ENSPEMG00000013891) #24	Mab21l4 (ENSPEMG00000001533) #25	Crocc2 (ENSPEMG00000014619) #26	Sned1 (ENSPEMG00000008505) #27	Mterf4 (ENSPEMG00000026952) #28	Pask (ENSPEMG00000022938) #29	Ppp1r7 (ENSPEMG00000001859)	Ano7 (ENSPEMG00000011761) #31	Hdlbp (ENSPEMG00000017704) #32	ENSPEMG00000022937 #33	Farp2 (ENSPEMG00000023787) #34	Stk25 (ENSPEMG00000023590) #35	Bok (ENSPEMG00000023399) #36	Thap4 (ENSPEMG00000022638) #37
Murinae	ANCESTRAL SPECIES	9	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT01100000263494.a.a.a.a.b.a.m.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Mus	ANCESTRAL SPECIES	5	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT01100000263494.a.a.a.a.b.a.m.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Mus_A	ANCESTRAL SPECIES	5	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT01100000263494.a.a.a.a.b.a.m.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT01100000263494.a.a.a.a.b.a.m.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Mouse	MODERN SPECIES		Or6b2b (ENSMUSG00000057464) ##12	Or6b3 (ENSMUSG00000042849) ##12	Or9s23 (ENSMUSG00000058904)	Or9s27 (ENSMUSG00000046300)	Or9s15 (ENSMUSG00000062497)	Or9s14 (ENSMUSG00000063583)	Or9s13 (ENSMUSG00000061616)	Cops9 (ENSMUSG00000073616)	Otos (ENSMUSG00000044055) #14	Gpc1 (ENSMUSG00000034220) #15	Ankmy1 (ENSMUSG00000034212) #16	Dusp28 (ENSMUSG00000047067) #17	Rnpepl1 (ENSMUSG00000026269) #18	Capn10 (ENSMUSG00000026270) #19	Gpr35 (ENSMUSG00000026271) #20	Aqp12 (ENSMUSG00000045091) #22	Kif1a (ENSMUSG00000014602) #23	Agxt (ENSMUSG00000026272) #24	Mab21l4 (ENSMUSG00000034159) #25	Crocc2 (ENSMUSG00000084989) #26	Sned1 (ENSMUSG00000047793) #27	Mterf4 (ENSMUSG00000026273) #28	Pask (ENSMUSG00000026274) #29	Ppp1r7 (ENSMUSG00000026275)	Ano7 (ENSMUSG00000034107) #31	Hdlbp (ENSMUSG00000034088) #32	Septin2 (ENSMUSG00000026276) #33	Septin2 (ENSMUSG00000116048) #33	Farp2 (ENSMUSG00000034066) #34	Stk25 (ENSMUSG00000026277) #35	Bok (ENSMUSG00000026278) #36
Mus_C	ANCESTRAL SPECIES	1	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT01100000263494.a.a.a.a.b.a.m.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
spretus	MODERN SPECIES		MGP_SPRETEiJ_G0015235 ##12	Or6b3 (MGP_SPRETEiJ_G0015236) ##12	Or9s23 (MGP_SPRETEiJ_G0015237)	Or9s27 (MGP_SPRETEiJ_G0015238)	Or9s15 (MGP_SPRETEiJ_G0015239)	Or9s14 (MGP_SPRETEiJ_G0015240)	Or9s13 (MGP_SPRETEiJ_G0015241)	Cops9 (MGP_SPRETEiJ_G0015242)	Otos (MGP_SPRETEiJ_G0015243) #14	Gpc1 (MGP_SPRETEiJ_G0015244) #15	Ankmy1 (MGP_SPRETEiJ_G0015245) #16	Dusp28 (MGP_SPRETEiJ_G0015246) #17	Rnpepl1 (MGP_SPRETEiJ_G0015247) #18	Capn10 (MGP_SPRETEiJ_G0015248) #19	Gpr35 (MGP_SPRETEiJ_G0015249) #20	Aqp12 (MGP_SPRETEiJ_G0015250) #22	Kif1a (MGP_SPRETEiJ_G0015251) #23	Agxt (MGP_SPRETEiJ_G0015252) #24	Mab21l4 (MGP_SPRETEiJ_G0015253) #25	Crocc2 (MGP_SPRETEiJ_G0015254) #26	Sned1 (MGP_SPRETEiJ_G0015255) #27	Mterf4 (MGP_SPRETEiJ_G0015256) #28	Pask (MGP_SPRETEiJ_G0015257) #29	Ppp1r7 (MGP_SPRETEiJ_G0015258)	Ano7 (MGP_SPRETEiJ_G0015259) #31	Hdlbp (MGP_SPRETEiJ_G0015260) #32	MGP_SPRETEiJ_G0015261 #33	Farp2 (MGP_SPRETEiJ_G0015262) #34	Stk25 (MGP_SPRETEiJ_G0015263) #35	Bok (MGP_SPRETEiJ_G0015264) #36	Thap4 (MGP_SPRETEiJ_G0015265) #37
Steppe mouse	MODERN SPECIES	2937	Or6b3 (ENSMSIG00000014010) ##12	Or9s23 (ENSMSIG00000014021)	Or9s27 (ENSMSIG00000014026)	Or9s15 (ENSMSIG00000014031)	Or9s14 (ENSMSIG00000014036)	Or9s13 (ENSMSIG00000014042)	ENSMSIG00000014046 #13	Otos (ENSMSIG00000014058) #14	Gpc1 (ENSMSIG00000014065) #15	Ankmy1 (ENSMSIG00000014085) #16	Dusp28 (ENSMSIG00000014219) #17	Rnpepl1 (ENSMSIG00000014227) #18	ENSMSIG00000014261	Capn10 (ENSMSIG00000014267) #19	Gpr35 (ENSMSIG00000014380) #20	Aqp12 (ENSMSIG00000014387) #22	Kif1a (ENSMSIG00000014413) #23	ENSMSIG00000016103	Agxt (ENSMSIG00000016129) #24	Mab21l4 (ENSMSIG00000016176) #25	Crocc2 (ENSMSIG00000016212) #26	Sned1 (ENSMSIG00000016292) #27	Mterf4 (ENSMSIG00000016399) #28	Pask (ENSMSIG00000016422) #29	ENSMSIG00000016450 #30	Ano7 (ENSMSIG00000016501) #31	Hdlbp (ENSMSIG00000016627) #32	ENSMSIG00000016766 #33	ENSMSIG00000016781 #34
Ryukyu mouse	MODERN SPECIES		MGP_CAROLIEiJ_G0014431 ##12	Or6b3 (MGP_CAROLIEiJ_G0014432) ##12	Or9s23 (MGP_CAROLIEiJ_G0014433)	Or9s27 (MGP_CAROLIEiJ_G0014434)	Or9s15 (MGP_CAROLIEiJ_G0014435)	Or9s14 (MGP_CAROLIEiJ_G0014436)	Or9s13 (MGP_CAROLIEiJ_G0014437)	Cops9 (MGP_CAROLIEiJ_G0014438)	Otos (MGP_CAROLIEiJ_G0014439) #14	Gpc1 (MGP_CAROLIEiJ_G0014440) #15	Ankmy1 (MGP_CAROLIEiJ_G0014441) #16	Dusp28 (MGP_CAROLIEiJ_G0014442) #17	Rnpepl1 (MGP_CAROLIEiJ_G0014443) #18	Capn10 (MGP_CAROLIEiJ_G0014444) #19	Gpr35 (MGP_CAROLIEiJ_G0014445) #20	Aqp12 (MGP_CAROLIEiJ_G0014446) #22	Kif1a (MGP_CAROLIEiJ_G0014447) #23	Agxt (MGP_CAROLIEiJ_G0014448) #24	Mab21l4 (MGP_CAROLIEiJ_G0014449) #25	Crocc2 (MGP_CAROLIEiJ_G0014450) #26	Sned1 (MGP_CAROLIEiJ_G0014451) #27	Mterf4 (MGP_CAROLIEiJ_G0014452) #28	Pask (MGP_CAROLIEiJ_G0014453) #29	Ppp1r7 (MGP_CAROLIEiJ_G0014454)	Ano7 (MGP_CAROLIEiJ_G0014455) #31	Hdlbp (MGP_CAROLIEiJ_G0014456) #32	MGP_CAROLIEiJ_G0014457 #33	Farp2 (MGP_CAROLIEiJ_G0014458) #34	Stk25 (MGP_CAROLIEiJ_G0014459) #35	Bok (MGP_CAROLIEiJ_G0014460) #36	Thap4 (MGP_CAROLIEiJ_G0014461) #37
Shrew mouse	MODERN SPECIES	18	MGP_PahariEiJ_G0027667 ##12	Or6b3 (MGP_PahariEiJ_G0027668) ##12	Or9s23 (MGP_PahariEiJ_G0027669)	Or9s27 (MGP_PahariEiJ_G0027670)	Or9s15 (MGP_PahariEiJ_G0027671)	Or9s14 (MGP_PahariEiJ_G0027672)	Or9s13 (MGP_PahariEiJ_G0027673)	Cops9 (MGP_PahariEiJ_G0027674)	Otos (MGP_PahariEiJ_G0027675) #14	Gpc1 (MGP_PahariEiJ_G0027676) #15	Ankmy1 (MGP_PahariEiJ_G0027677) #16	Dusp28 (MGP_PahariEiJ_G0027678) #17	Rnpepl1 (MGP_PahariEiJ_G0027679) #18	Capn10 (MGP_PahariEiJ_G0027680) #19	Gpr35 (MGP_PahariEiJ_G0027681) #20	Aqp12 (MGP_PahariEiJ_G0027682) #22	Kif1a (MGP_PahariEiJ_G0027683) #23	Agxt (MGP_PahariEiJ_G0027684) #24	Mab21l4 (MGP_PahariEiJ_G0027685) #25	Crocc2 (MGP_PahariEiJ_G0027686) #26	Sned1 (MGP_PahariEiJ_G0027687) #27	Mterf4 (MGP_PahariEiJ_G0027688) #28	Pask (MGP_PahariEiJ_G0027689) #29	Ppp1r7 (MGP_PahariEiJ_G0027690)	Ano7 (MGP_PahariEiJ_G0027691) #31	Hdlbp (MGP_PahariEiJ_G0027692) #32	MGP_PahariEiJ_G0027693 #33	Farp2 (MGP_PahariEiJ_G0027694) #34	Stk25 (MGP_PahariEiJ_G0027695) #35	Bok (MGP_PahariEiJ_G0027696) #36	Thap4 (MGP_PahariEiJ_G0027697) #37
Rat	MODERN SPECIES	19	Or6b3 (ENSRNOG00000064010) ##12	Or9s23b (ENSRNOG00000070407)	Or9s23 (ENSRNOG00000068571)	Or9s27 (ENSRNOG00000062550)	Or9s15 (ENSRNOG00000066764)	Or9s27 (ENSRNOG00000066727)	Or9s14 (ENSRNOG00000062524)	Or9s13 (ENSRNOG00000070697)	Cops9 (ENSRNOG00000037402)	Otos (ENSRNOG00000016567) #14	Gpc1 (ENSRNOG00000049437) #15	Ankmy1 (ENSRNOG00000048567) #16	Rnpepl1 (ENSRNOG00000045775) #18	Capn10 (ENSRNOG00000045623) #19	Gpr35 (ENSRNOG00000062887) #20	Aqp12a (ENSRNOG00000004452) #22	Kif1a (ENSRNOG00000023993) #23	Agxt (ENSRNOG00000023856) #24	Mab21l4 (ENSRNOG00000023557) #25	Crocc2 (ENSRNOG00000063752) #26	Sned1 (ENSRNOG00000023548) #27	Mterf4 (ENSRNOG00000037376) #28	Pask (ENSRNOG00000016888) #29	LOC102549694 (ENSRNOG00000066227)	AABR07068351.1 (ENSRNOG00000016974) #30	Ano7 (ENSRNOG00000023427) #31	Hdlbp (ENSRNOG00000031479) #32	Septin2 (ENSRNOG00000017952) #33	LOC100362040 (ENSRNOG00000030738)	Farp2 (ENSRNOG00000018051) #34	Stk25 (ENSRNOG00000018181) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	634	ENSNGAG00000017086	Twist2 (ENSNGAG00000021306) #8	Hdac4 (ENSNGAG00000022632) #9	Ndufa10 (ENSNGAG00000021987) #10	ENSNGAG00000014019 ##12	ENSNGAG00000023329 ##12	ENSNGAG00000013816 ##12	ENSNGAG00000014052 ##12	ENSNGAG00000019385 #13	Otos (ENSNGAG00000023827) #14	Gpc1 (ENSNGAG00000023787) #15	ENSNGAG00000023967 #16	Dusp28 (ENSNGAG00000003361) #17	Rnpepl1 (ENSNGAG00000023081) #18	Capn10 (ENSNGAG00000004324) #19	Aqp12 (ENSNGAG00000011624) #22	Kif1a (ENSNGAG00000022256) #23	Agxt (ENSNGAG00000022054) #24	Mab21l4 (ENSNGAG00000012567) #25	Crocc2 (ENSNGAG00000021519) #26	Sned1 (ENSNGAG00000023743) #27	Mterf4 (ENSNGAG00000023724) #28	Pask (ENSNGAG00000007549) #29	ENSNGAG00000017337 #30	Ano7 (ENSNGAG00000022445) #31	Hdlbp (ENSNGAG00000014873) #32	ENSNGAG00000022412 #33	Farp2 (ENSNGAG00000004760) #34	Stk25 (ENSNGAG00000001501) #35	Bok (ENSNGAG00000023762) #36	Thap4 (ENSNGAG00000024010) #37
Lesser Egyptian jerboa	MODERN SPECIES	146	ENSJJAG00000012551	ENSJJAG00000014728	Twist2 (ENSJJAG00000014780) #8	Hdac4 (ENSJJAG00000019569) #9	ENSJJAG00000018931 #10	Or6b3 (ENSJJAG00000014383) ##12	ENSJJAG00000016056	ENSJJAG00000014296	ENSJJAG00000010653 #13	Otos (ENSJJAG00000010257) #14	Gpc1 (ENSJJAG00000020512) #15	Ankmy1 (ENSJJAG00000016606) #16	Dusp28 (ENSJJAG00000010706) #17	Rnpepl1 (ENSJJAG00000010618) #18	Capn10 (ENSJJAG00000001191) #19	Aqp12 (ENSJJAG00000016259) #22	Kif1a (ENSJJAG00000018370) #23	Agxt (ENSJJAG00000012015) #24	Mab21l4 (ENSJJAG00000011171) #25	Crocc2 (ENSJJAG00000005843) #26	Sned1 (ENSJJAG00000012102) #27	Mterf4 (ENSJJAG00000000477) #28	Pask (ENSJJAG00000020114) #29	Ppp1r7 (ENSJJAG00000018768)	Hdlbp (ENSJJAG00000003596) #32	ENSJJAG00000019868 #33	Farp2 (ENSJJAG00000011289) #34	Stk25 (ENSJJAG00000000845) #35	Bok (ENSJJAG00000022455) #36	Thap4 (ENSJJAG00000022829) #37	ENSJJAG00000019840
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Marmotini	ANCESTRAL SPECIES	2	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706.c #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Marmotini_b	ANCESTRAL SPECIES	41	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.a.l ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706.c #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37	ENSGT00530000063000.a.b.b
Squirrel	MODERN SPECIES	345			TWIST2 (ENSSTOG00000004633) #8	HDAC4 (ENSSTOG00000011115) #9	NDUFA10 (ENSSTOG00000028742) #10	ENSSTOG00000016220	ENSSTOG00000002010 ##12	ENSSTOG00000034284	OTOS (ENSSTOG00000022691) #14	ENSSTOG00000021706 #15	ENSSTOG00000020642 #16	DUSP28 (ENSSTOG00000026128) #17	RNPEPL1 (ENSSTOG00000006614) #18	ENSSTOG00000027909 #19	GPR35 (ENSSTOG00000026086) #20	ENSSTOG00000022231 #22	KIF1A (ENSSTOG00000021868) #23	AGXT (ENSSTOG00000008004) #24	MAB21L4 (ENSSTOG00000006007) #25	SNED1 (ENSSTOG00000031779) #27	ENSSTOG00000016306	HDLBP (ENSSTOG00000013331) #32	SEPTIN2 (ENSSTOG00000013357) #33	FARP2 (ENSSTOG00000022815) #34	STK25 (ENSSTOG00000026742) #35	BOK (ENSSTOG00000028135) #36	THAP4 (ENSSTOG00000015998) #37	ATG4B (ENSSTOG00000014734)	ING5 (ENSSTOG00000005977)	D2HGDH (ENSSTOG00000023380)	PDCD1 (ENSSTOG00000022396)
Arctic ground squirrel	MODERN SPECIES	634											ANKMY1 (ENSUPAG00010013563) #16	DUSP28 (ENSUPAG00010013603) #17	RNPEPL1 (ENSUPAG00010013607) #18	CAPN10 (ENSUPAG00010013624) #19	GPR35 (ENSUPAG00010013650) #20	ENSUPAG00010013665 #22	KIF1A (ENSUPAG00010013677) #23	AGXT (ENSUPAG00010014165) #24	MAB21L4 (ENSUPAG00010014167) #25	CROCC2 (ENSUPAG00010014174) #26	SNED1 (ENSUPAG00010014208) #27	MTERF4 (ENSUPAG00010014252) #28	PASK (ENSUPAG00010014276) #29	ENSUPAG00010014539	HDLBP (ENSUPAG00010014553) #32	ENSUPAG00010014710 #33	FARP2 (ENSUPAG00010014740) #34	STK25 (ENSUPAG00010014936) #35
Alpin marmot	MODERN SPECIES	8	ASB1 (ENSMMMG00000005123) #7	TWIST2 (ENSMMMG00000005158) #8	HDAC4 (ENSMMMG00000005171) #9	NDUFA10 (ENSMMMG00000005276) #10	ENSMMMG00000005288	ENSMMMG00000005299	ENSMMMG00000005309	COPS9 (ENSMMMG00000005314) #13	OTOS (ENSMMMG00000005322) #14	GPC1 (ENSMMMG00000005333) #15	ANKMY1 (ENSMMMG00000005391) #16	DUSP28 (ENSMMMG00000005989) #17	RNPEPL1 (ENSMMMG00000005992) #18	CAPN10 (ENSMMMG00000006016) #19	GPR35 (ENSMMMG00000006043) #20	ENSMMMG00000006051 #22	KIF1A (ENSMMMG00000006074) #23	AGXT (ENSMMMG00000007051) #24	MAB21L4 (ENSMMMG00000007065) #25	SNED1 (ENSMMMG00000007168) #27	MTERF4 (ENSMMMG00000007236) #28	ENSMMMG00000007249 #29	ENSMMMG00000007277	ENSMMMG00000007280	HDLBP (ENSMMMG00000007299) #32	SEPTIN2 (ENSMMMG00000007576) #33	ENSMMMG00000007620 #34	ENSMMMG00000007659 #34	STK25 (ENSMMMG00000007681) #35	ENSMMMG00000007706 #35	BOK (ENSMMMG00000007720) #36
Eurasian red squirrel	MODERN SPECIES	12	TWIST2 (ENSSVLG00005007712) #8	HDAC4 (ENSSVLG00005007840) #9	NDUFA10 (ENSSVLG00005008228) #10	ENSSVLG00005008249 ##12	ENSSVLG00005008260 ##12	ENSSVLG00005008275	ENSSVLG00005008313	COPS9 (ENSSVLG00005008352) #13	OTOS (ENSSVLG00005008376) #14	GPC1 (ENSSVLG00005008402) #15	ANKMY1 (ENSSVLG00005008521) #16	DUSP28 (ENSSVLG00005008924) #17	RNPEPL1 (ENSSVLG00005008949) #18	CAPN10 (ENSSVLG00005009012) #19	GPR35 (ENSSVLG00005009100) #20	ENSSVLG00005009123 #22	KIF1A (ENSSVLG00005009282) #23	AGXT (ENSSVLG00005010198) #24	MAB21L4 (ENSSVLG00005010284) #25	CROCC2 (ENSSVLG00005010408) #26	SNED1 (ENSSVLG00005010615) #27	MTERF4 (ENSSVLG00005010874) #28	ENSSVLG00005010962 #29	ENSSVLG00005011084	ENSSVLG00005011132	HDLBP (ENSSVLG00005011227) #32	ENSSVLG00005011546 #33	FARP2 (ENSSVLG00005011791) #34	STK25 (ENSSVLG00005011880) #35	BOK (ENSSVLG00005012052) #36	THAP4 (ENSSVLG00005012097) #37
Hystricomorpha	ANCESTRAL SPECIES	28	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.i.b	ENSGT01100000263494.a.a.a.a.b.a.m.i.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.j	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37	ENSGT00900000143170
Hystricomorpha_a	ANCESTRAL SPECIES	32	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.i.b	ENSGT01100000263494.a.a.a.a.b.a.m.i.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.j	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37	ENSGT00900000143170
Hystricomorpha_b	ANCESTRAL SPECIES	28	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.j	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098.r #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37	ENSGT00900000143170
Long-tailed chinchilla	MODERN SPECIES	249	HDAC4 (ENSCLAG00000003187) #9	NDUFA10 (ENSCLAG00000002249) #10	ENSCLAG00000002137 ##12	ENSCLAG00000001983	ENSCLAG00000017490	ENSCLAG00000001936	ENSCLAG00000001920	COPS9 (ENSCLAG00000001813) #13	OTOS (ENSCLAG00000001765) #14	GPC1 (ENSCLAG00000002259) #15	ANKMY1 (ENSCLAG00000002009) #16	DUSP28 (ENSCLAG00000001935) #17	RNPEPL1 (ENSCLAG00000001861) #18	CAPN10 (ENSCLAG00000001835) #19	GPR35 (ENSCLAG00000001799) #20	ENSCLAG00000004274 #22	KIF1A (ENSCLAG00000003068) #23	AGXT (ENSCLAG00000002870) #24	MAB21L4 (ENSCLAG00000002824) #25	CROCC2 (ENSCLAG00000002724) #26	SNED1 (ENSCLAG00000002607) #27	MTERF4 (ENSCLAG00000002565) #28	PASK (ENSCLAG00000002519) #29	ENSCLAG00000002485	HDLBP (ENSCLAG00000002365) #32	ENSCLAG00000002255 #33	FARP2 (ENSCLAG00000002135) #34	STK25 (ENSCLAG00000002040) #35	BOK (ENSCLAG00000002024) #36	ENSCLAG00000002013	THAP4 (ENSCLAG00000002361) #37
Degu	MODERN SPECIES	130	TRAF3IP1 (ENSODEG00000009879)	ASB1 (ENSODEG00000009233) #7	TWIST2 (ENSODEG00000019629) #8	ENSODEG00000009580	ENSODEG00000009986 #10	ENSODEG00000019773 ##12	ENSODEG00000008649	OTOS (ENSODEG00000009723) #14	ENSODEG00000019717	ENSODEG00000019706	GPC1 (ENSODEG00000010463) #15	ANKMY1 (ENSODEG00000012472) #16	DUSP28 (ENSODEG00000008939) #17	RNPEPL1 (ENSODEG00000009147) #18	CAPN10 (ENSODEG00000008893) #19	ENSODEG00000013071 #22	KIF1A (ENSODEG00000009831) #23	ENSODEG00000010118	AGXT (ENSODEG00000010326) #24	MAB21L4 (ENSODEG00000009520) #25	CROCC2 (ENSODEG00000013957) #26	SNED1 (ENSODEG00000009052) #27	MTERF4 (ENSODEG00000010009) #28	PASK (ENSODEG00000011073) #29	ENSODEG00000011577	ENSODEG00000012313 #32	ENSODEG00000010316 #33	ENSODEG00000019687	FARP2 (ENSODEG00000010817) #34	STK25 (ENSODEG00000010648) #35	BOK (ENSODEG00000011482) #36
Guinea pig	MODERN SPECIES	13	HDAC4 (ENSCPOG00000013072) #9	NDUFA10 (ENSCPOG00000010123) #10	ENSCPOG00000032551 ##12	ENSCPOG00000038331	ENSCPOG00000033521	ENSCPOG00000032686	ENSCPOG00000033828	COPS9 (ENSCPOG00000038915) #13	OTOS (ENSCPOG00000038739) #14	GPC1 (ENSCPOG00000000572) #15	ANKMY1 (ENSCPOG00000007794) #16	DUSP28 (ENSCPOG00000022626) #17	RNPEPL1 (ENSCPOG00000015474) #18	CAPN10 (ENSCPOG00000012504) #19	GPR35 (ENSCPOG00000032800) #20	ENSCPOG00000006590 #22	KIF1A (ENSCPOG00000010400) #23	AGXT (ENSCPOG00000008216) #24	MAB21L4 (ENSCPOG00000026460) #25	CROCC2 (ENSCPOG00000025037) #26	SNED1 (ENSCPOG00000006265) #27	MTERF4 (ENSCPOG00000025700) #28	PASK (ENSCPOG00000006277) #29	PPP1R7 (ENSCPOG00000006285) #30	HDLBP (ENSCPOG00000006297) #32	ENSCPOG00000013687 #33	ENSCPOG00000038694	FARP2 (ENSCPOG00000013335) #34	STK25 (ENSCPOG00000022798) #35	ENSCPOG00000025899	BOK (ENSCPOG00000030494) #36
Naked mole-rat female	MODERN SPECIES	17	ENSHGLG00000050528	ENSHGLG00000019452	ENSHGLG00000032795	ENSHGLG00000044910	ENSHGLG00000035810	ENSHGLG00000044056	ENSHGLG00000050265	MYEOV2 (ENSHGLG00000039521) #13	ENSHGLG00000018402 #14	GPC1 (ENSHGLG00000016089) #15	ANKMY1 (ENSHGLG00000014751) #16	DUSP28 (ENSHGLG00000014963) #17	RNPEPL1 (ENSHGLG00000002684) #18	CAPN10 (ENSHGLG00000002728) #19	ENSHGLG00000002761 #20	ENSHGLG00000044321 #22	ENSHGLG00000036560 #23
Lagomorpha	ANCESTRAL SPECIES	625																ENSGT00530000063816.d #22	ENSGT00940000156474 #23
Pika	MODERN SPECIES	4064																ENSOPRG00000004845 #22	ENSOPRG00000004859 #23
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Carnivora	ANCESTRAL SPECIES	17	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Caniformia	ANCESTRAL SPECIES	14	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059.b #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Ursus	ANCESTRAL SPECIES	12	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059.b #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b.f ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b.e ##12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
American black bear	MODERN SPECIES	642							ENSUAMG00000019045 #31	ENSUAMG00000019044	ENSUAMG00000019041 #29	MTERF4 (ENSUAMG00000019040) #28	ENSUAMG00000019039 #27	CROCC2 (ENSUAMG00000019034) #26	MAB21L4 (ENSUAMG00000019033) #25	AGXT (ENSUAMG00000019032) #24	KIF1A (ENSUAMG00000016046) #23	ENSUAMG00000015935 #22	ENSUAMG00000015928 #20
Polar bear	MODERN SPECIES	169	ENSUMAG00000010497 #36	STK25 (ENSUMAG00000010503) #35	FARP2 (ENSUMAG00000010519) #34	SEPTIN2 (ENSUMAG00000010525) #33	HDLBP (ENSUMAG00000010539) #32	ANO7 (ENSUMAG00000010556) #31	ENSUMAG00000010567	PASK (ENSUMAG00000010599) #29	MTERF4 (ENSUMAG00000010771) #28	ENSUMAG00000010780 #27	CROCC2 (ENSUMAG00000010789) #26	AGXT (ENSUMAG00000010802) #24	ENSUMAG00000010813 #23	ENSUMAG00000010821 #23	ENSUMAG00000010827 #23	ENSUMAG00000010830 #22	ENSUMAG00000010840 #20	CAPN10 (ENSUMAG00000010851) #19	ENSUMAG00000010860 #16	GPC1 (ENSUMAG00000010882) #15	OTOS (ENSUMAG00000010922) #14	ENSUMAG00000010923	ENSUMAG00000010924	ENSUMAG00000010925 ##12	ENSUMAG00000010926 ##12	NDUFA10 (ENSUMAG00000010938) #10	HDAC4 (ENSUMAG00000011143) #9	ASB1 (ENSUMAG00000011505) #7	TRAF3IP1 (ENSUMAG00000011513)	PER2 (ENSUMAG00000011574)	ILKAP (ENSUMAG00000011877)
Giant Panda	MODERN SPECIES	11	ENSAMEG00000016421	ATG4B (ENSAMEG00000016425)	STK25 (ENSAMEG00000016473) #35	FARP2 (ENSAMEG00000016513) #34	ENSAMEG00000023910 #33	ENSAMEG00000028718 #36	HDLBP (ENSAMEG00000016552) #32	ANO7 (ENSAMEG00000016590) #31	PASK (ENSAMEG00000016638) #29	MTERF4 (ENSAMEG00000016670) #28	SNED1 (ENSAMEG00000016675) #27	CROCC2 (ENSAMEG00000016680) #26	MAB21L4 (ENSAMEG00000016697) #25	AGXT (ENSAMEG00000016700) #24	KIF1A (ENSAMEG00000016731) #23	ENSAMEG00000016813 #22	ENSAMEG00000031353 #20	GPR35 (ENSAMEG00000016815) #20	CAPN10 (ENSAMEG00000016817) #19	RNPEPL1 (ENSAMEG00000016842) #18	DUSP28 (ENSAMEG00000029651) #17	ANKMY1 (ENSAMEG00000016873) #16	GPC1 (ENSAMEG00000011201) #15	OTOS (ENSAMEG00000011215) #14	ENSAMEG00000030947 #13	ENSAMEG00000020162	ENSAMEG00000030179 ##12	NDUFA10 (ENSAMEG00000011222) #10	HDAC4 (ENSAMEG00000011278) #9	TWIST2 (ENSAMEG00000020165) #8	ASB1 (ENSAMEG00000024283) #7
Mustelinae	ANCESTRAL SPECIES	21	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
American mink	MODERN SPECIES	275	ENSNVIG00000018353 #37	BOK (ENSNVIG00000018340) #36	STK25 (ENSNVIG00000018289) #35	FARP2 (ENSNVIG00000018158) #34	SEPTIN2 (ENSNVIG00000018096) #33	HDLBP (ENSNVIG00000018029) #32	ANO7 (ENSNVIG00000017977) #31	ENSNVIG00000017870	PASK (ENSNVIG00000017829) #29	MTERF4 (ENSNVIG00000017805) #28	ENSNVIG00000017789 #27	CROCC2 (ENSNVIG00000017692) #26	MAB21L4 (ENSNVIG00000017663) #25	AGXT (ENSNVIG00000017620) #24	KIF1A (ENSNVIG00000015841) #23	ENSNVIG00000015738 #22	GPR35 (ENSNVIG00000015733) #20	CAPN10 (ENSNVIG00000015662) #19	RNPL1 (ENSNVIG00000015626) #18	DUSP28 (ENSNVIG00000015613) #17	ENSNVIG00000015604 #16	ENSNVIG00000015597	GPC1 (ENSNVIG00000015575) #15	OTOS (ENSNVIG00000015569) #14	COPS9 (ENSNVIG00000015564) #13
Ferret	MODERN SPECIES	173	BOK (ENSMPUG00000000179) #36	ENSMPUG00000000178	STK25 (ENSMPUG00000000176) #35	FARP2 (ENSMPUG00000000175) #34	SEPTIN2 (ENSMPUG00000000166) #33	HDLBP (ENSMPUG00000000163) #32	ANO7 (ENSMPUG00000000160) #31	PASK (ENSMPUG00000000158) #29	MTERF4 (ENSMPUG00000000155) #28	ENSMPUG00000000152	SNED1 (ENSMPUG00000000147) #27	CROCC2 (ENSMPUG00000000145) #26	MAB21L4 (ENSMPUG00000000144) #25	AGXT (ENSMPUG00000000143) #24	KIF1A (ENSMPUG00000000142) #23	ENSMPUG00000000141 #22	GPR35 (ENSMPUG00000019432) #20	CAPN10 (ENSMPUG00000000139) #19	RNPEPL1 (ENSMPUG00000000138) #18	DUSP28 (ENSMPUG00000000137) #17	ENSMPUG00000000135	ANKMY1 (ENSMPUG00000000132) #16	GPC1 (ENSMPUG00000000131) #15	ENSMPUG00000000130	OTOS (ENSMPUG00000000129) #14	ENSMPUG00000019431	ENSMPUG00000019430 ##12	NDUFA10 (ENSMPUG00000000128) #10	HDAC4 (ENSMPUG00000000127) #9	TWIST2 (ENSMPUG00000019429) #8	ASB1 (ENSMPUG00000000126) #7
Canidae	ANCESTRAL SPECIES	20	ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098.ib.b #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076.j #13	ENSGT01100000263494.a.a.a.a.b.a.k.a.b.b	ENSGT01100000263494.a.a.a.a.b.a.k.a.b.a	ENSGT01100000263494.a.a.a.a.b.a.k.b.a.a.b	ENSGT01100000263494.a.a.a.a.b.a.l.a.a	ENSGT01100000263494.a.a.a.a.b.a.l.b.a	ENSGT01100000263494.a.a.a.a.b.a.l.b.b	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.o #12
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098.ib.b #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00390000000703.h.lb.b	ENSGT00940000160730 #27	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076.j #13	ENSGT01100000263494.a.a.a.a.b.a.k.a.b.b	ENSGT01100000263494.a.a.a.a.b.a.k.a.b.a	ENSGT01100000263494.a.a.a.a.b.a.k.b.a.a.a.a	ENSGT01100000263494.a.a.a.a.b.a.l.a.a	ENSGT01100000263494.a.a.a.a.b.a.l.b.a	ENSGT01100000263494.a.a.a.a.b.a.l.b.b	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.o #12
Dingo	MODERN SPECIES	304	THAP4 (ENSCAFG00020025129) #37	BOK (ENSCAFG00020025122) #36	STK25 (ENSCAFG00020025119) #35	FARP2 (ENSCAFG00020025110) #34	ENSCAFG00020025094 #33	HDLBP (ENSCAFG00020025089) #32	ANO7 (ENSCAFG00020025079) #31	ENSCAFG00020025077	PASK (ENSCAFG00020025046) #29	ENSCAFG00020025033 #28	ENSCAFG00020025030	SNED1 (ENSCAFG00020024966) #27	MAB21L4 (ENSCAFG00020024951) #25	AGXT (ENSCAFG00020024949) #24	KIF1A (ENSCAFG00020024781) #23	ENSCAFG00020024725 #22	GPR35 (ENSCAFG00020024721) #20	CAPN10 (ENSCAFG00020024718) #19	RNPEPL1 (ENSCAFG00020024716) #18	DUSP28 (ENSCAFG00020024714) #17	ANKMY1 (ENSCAFG00020024711) #16	GPC1 (ENSCAFG00020024705) #15	ENSCAFG00020024704 #14	ENSCAFG00020024702 #13	ENSCAFG00020024697	ENSCAFG00020024694	ENSCAFG00020024693	ENSCAFG00020024692	ENSCAFG00020024691	ENSCAFG00020024690	ENSCAFG00020024689
Dog	MODERN SPECIES	17	THAP4 (ENSCAFG00845023699) #37	ENSCAFG00845023631 #36	STK25 (ENSCAFG00845023492) #35	FARP2 (ENSCAFG00845023180) #34	SEPTIN2 (ENSCAFG00845023027) #33	HDLBP (ENSCAFG00845022763) #32	ANO7 (ENSCAFG00845022518) #31	PPP1R7 (ENSCAFG00845022243) #30	PASK (ENSCAFG00845021974) #29	ENSCAFG00845021901 #28	ENSCAFG00845021865	SNED1 (ENSCAFG00845021016) #27	MAB21L4 (ENSCAFG00845020820) #25	AGXT (ENSCAFG00845020770) #24	KIF1A (ENSCAFG00845030810) #23	AQP12 (ENSCAFG00845030743) #22	GPR35 (ENSCAFG00845030733) #20	CAPN10 (ENSCAFG00845030713) #19	RNPEPL1 (ENSCAFG00845030682) #18	ANKMY1 (ENSCAFG00845030657) #16	GPC1 (ENSCAFG00845030628) #15	ENSCAFG00845030618 #14	ENSCAFG00845030601	ENSCAFG00845030592	ENSCAFG00845030587	OR9S16 (ENSCAFG00845030579)	OR9S5 (ENSCAFG00845030571)	OR9S12 (ENSCAFG00845030564)	OR9S20 (ENSCAFG00845030551)	OR9S11 (ENSCAFG00845030529)	OR9S26 (ENSCAFG00845030519)
Red fox	MODERN SPECIES	253	ATG4B (ENSVVUG00000022778)	THAP4 (ENSVVUG00000022780) #37	ENSVVUG00000022782 #36	STK25 (ENSVVUG00000022783) #35	ENSVVUG00000022785 #34	ENSVVUG00000022790 #34	SEPT2 (ENSVVUG00000022793) #33	HDLBP (ENSVVUG00000022797) #32	PPP1R7 (ENSVVUG00000022804)	PASK (ENSVVUG00000022805) #29	SNED1 (ENSVVUG00000022810) #27	ENSVVUG00000022955	MAB21L4 (ENSVVUG00000022960) #25	AGXT (ENSVVUG00000022967) #24	KIF1A (ENSVVUG00000022993) #23	AQP12B (ENSVVUG00000023548) #22	GPR35 (ENSVVUG00000023550) #20	CAPN10 (ENSVVUG00000023557) #19	RNPEPL1 (ENSVVUG00000023560) #18	ANKMY1 (ENSVVUG00000023563) #16	GPC1 (ENSVVUG00000023568) #15	OTOS (ENSVVUG00000023588) #14	ENSVVUG00000023595	ENSVVUG00000023597	ENSVVUG00000023602	ENSVVUG00000023605	ENSVVUG00000023607	ENSVVUG00000023610	ENSVVUG00000023613	ENSVVUG00000023615 #12	ENSVVUG00000023618 #12
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Panthera	ANCESTRAL SPECIES	9	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Panthera_a	ANCESTRAL SPECIES	6	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
lion	MODERN SPECIES	8	ENSPLOG00000011251 #34	ENSPLOG00000011349 #34	ENSPLOG00000011615	SEPTIN2 (ENSPLOG00000011660) #33	HDLBP (ENSPLOG00000011820) #32	ANO7 (ENSPLOG00000012088) #31	PPP1R7 (ENSPLOG00000012498) #30	ENSPLOG00000012697	ENSPLOG00000012740 #29	MTERF4 (ENSPLOG00000012860) #28	ENSPLOG00000012906 #27	CROCC2 (ENSPLOG00000013069) #26	MAB21L4 (ENSPLOG00000013308) #25	AGXT (ENSPLOG00000013397) #24	KIF1A (ENSPLOG00000014164) #23	ENSPLOG00000018271 #22	ENSPLOG00000018344 #20	GPR35 (ENSPLOG00000018360) #20	CAPN10 (ENSPLOG00000018408) #19	RNPEPL1 (ENSPLOG00000018556) #18	DUSP28 (ENSPLOG00000018592) #17	ENSPLOG00000018623 #16	GPC1 (ENSPLOG00000018679) #15	OTOS (ENSPLOG00000018817) #14	COPS9 (ENSPLOG00000018891) #13	ENSPLOG00000018918 #12	NDUFA10 (ENSPLOG00000018943) #10	HDAC4 (ENSPLOG00000018983) #9	TWIST2 (ENSPLOG00000019027) #8	ASB1 (ENSPLOG00000019075) #7	TRAF3IP1 (ENSPLOG00000019150)
leopard	MODERN SPECIES	12	ATG4B (ENSPPRG00000005113)	THAP4 (ENSPPRG00000001382) #37	BOK (ENSPPRG00000023173) #36	STK25 (ENSPPRG00000023379) #35	FARP2 (ENSPPRG00000018957) #34	SEPTIN2 (ENSPPRG00000012154) #33	HDLBP (ENSPPRG00000010215) #32	PPP1R7 (ENSPPRG00000004627) #30	PASK (ENSPPRG00000001870) #29	MTERF4 (ENSPPRG00000016102) #28	SNED1 (ENSPPRG00000013999) #27	CROCC2 (ENSPPRG00000008256) #26	MAB21L4 (ENSPPRG00000006592) #25	AGXT (ENSPPRG00000006319) #24	KIF1A (ENSPPRG00000005573) #23	ENSPPRG00000000892 #22	GPR35 (ENSPPRG00000018190) #20	CAPN10 (ENSPPRG00000022771) #19	RNPEPL1 (ENSPPRG00000017769) #18	DUSP28 (ENSPPRG00000016441) #17	ANKMY1 (ENSPPRG00000014732) #16	GPC1 (ENSPPRG00000006984) #15	OTOS (ENSPPRG00000006023) #14	COPS9 (ENSPPRG00000005448) #13	NDUFA10 (ENSPPRG00000005038) #10	HDAC4 (ENSPPRG00000003105) #9	TWIST2 (ENSPPRG00000017615) #8	ASB1 (ENSPPRG00000000299) #7	TRAF3IP1 (ENSPPRG00000022829)	HES6 (ENSPPRG00000018203)	ILKAP (ENSPPRG00000014102)
Cat	MODERN SPECIES	239	THAP4 (ENSFCAG00000014280) #37	BOK (ENSFCAG00000014277) #36	STK25 (ENSFCAG00000002803) #35	FARP2 (ENSFCAG00000002801) #34	SEPTIN2 (ENSFCAG00000002797) #33	HDLBP (ENSFCAG00000010455) #32	ANO7 (ENSFCAG00000010453) #31	PPP1R7 (ENSFCAG00000010452)	PASK (ENSFCAG00000000959) #29	MTERF4 (ENSFCAG00000010451) #28	SNED1 (ENSFCAG00000010450) #27	CROCC2 (ENSFCAG00000030979) #26	MAB21L4 (ENSFCAG00000010449) #25	AGXT (ENSFCAG00000010448) #24	KIF1A (ENSFCAG00000010434) #23	AQP12 (ENSFCAG00000010433) #22	ENSFCAG00000051459 #20	GPR35 (ENSFCAG00000024715) #20	CAPN10 (ENSFCAG00000012470) #19	RNPEPL1 (ENSFCAG00000012468) #18	DUSP28 (ENSFCAG00000043250) #17	ANKMY1 (ENSFCAG00000012464) #16	GPC1 (ENSFCAG00000024217) #15	OTOS (ENSFCAG00000012462) #14	COPS9 (ENSFCAG00000032763) #13	ENSFCAG00000052029	ENSFCAG00000002985 #12	NDUFA10 (ENSFCAG00000040382) #10	HDAC4 (ENSFCAG00000014232) #9	TWIST2 (ENSFCAG00000037141) #8	ASB1 (ENSFCAG00000001851) #7
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342	ENSGT00940000161398
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342	ENSGT00940000161398
Microbat	MODERN SPECIES	942	BOK (ENSMLUG00000028632) #36	STK25 (ENSMLUG00000007158) #35	ENSMLUG00000022825	FARP2 (ENSMLUG00000007123) #34	SEPTIN2 (ENSMLUG00000007108) #33	HDLBP (ENSMLUG00000005628) #32	ANO7 (ENSMLUG00000005611) #31	ENSMLUG00000005606	PASK (ENSMLUG00000005589) #29	MTERF4 (ENSMLUG00000005579) #28	SNED1 (ENSMLUG00000012911) #27	CROCC2 (ENSMLUG00000022867) #26	MAB21L4 (ENSMLUG00000012906) #25	AGXT (ENSMLUG00000002394) #24	KIF1A (ENSMLUG00000006051) #23	ENSMLUG00000004331 #22	GPR35 (ENSMLUG00000004586) #20	CAPN10 (ENSMLUG00000004607) #19	RNPEPL1 (ENSMLUG00000004601) #18	DUSP28 (ENSMLUG00000004599) #17	ANKMY1 (ENSMLUG00000004589) #16	GPC1 (ENSMLUG00000004583) #15	OTOS (ENSMLUG00000000662) #14	COPS9 (ENSMLUG00000026277) #13	NDUFA10 (ENSMLUG00000005086) #10	HDAC4 (ENSMLUG00000014603) #9	TWIST2 (ENSMLUG00000023316) #8
Greater horseshoe bat	MODERN SPECIES	26	ATG4B (ENSRFEG00010000748)	THAP4 (ENSRFEG00010000777) #37	BOK (ENSRFEG00010000801) #36	STK25 (ENSRFEG00010000825) #35	FARP2 (ENSRFEG00010000873) #34	SEPTIN2 (ENSRFEG00010000923) #33	ENSRFEG00010000976 #32	ANO7 (ENSRFEG00010001001) #31	ENSRFEG00010001029	PASK (ENSRFEG00010001084) #29	MTERF4 (ENSRFEG00010001122) #28	SNED1 (ENSRFEG00010001292) #27	MAB21L4 (ENSRFEG00010001650) #25	AGXT (ENSRFEG00010001703) #24	KIF1A (ENSRFEG00010001843) #23	ENSRFEG00010002117 #22	ENSRFEG00010002142 #20	GPR35 (ENSRFEG00010002157) #20	CAPN10 (ENSRFEG00010002208) #19	RNPEPL1 (ENSRFEG00010002246) #18	DUSP28 (ENSRFEG00010002261) #17	ENSRFEG00010002268 #16	GPC1 (ENSRFEG00010002298) #15	OTOS (ENSRFEG00010002365) #14	COPS9 (ENSRFEG00010002380) #13	NDUFA10 (ENSRFEG00010002397) #10	HDAC4 (ENSRFEG00010002464) #9	TWIST2 (ENSRFEG00010002558) #8	ASB1 (ENSRFEG00010002567) #7	TRAF3IP1 (ENSRFEG00010002606)	PER2 (ENSRFEG00010002711)
Equus	ANCESTRAL SPECIES	15	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059.f #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.n #12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.m #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b.m #7
Donkey	MODERN SPECIES	10	BOK (ENSEASG00005008290) #36	STK25 (ENSEASG00005008279) #35	FARP2 (ENSEASG00005008264) #34	SEPTIN2 (ENSEASG00005008254) #33	HDLBP (ENSEASG00005008249) #32	ENSEASG00005008231 #31	ENSEASG00005025357 #31	ENSEASG00005008227	ENSEASG00005037592 #29	MTERF4 (ENSEASG00005008185) #28	SNED1 (ENSEASG00005008171) #27	CROCC2 (ENSEASG00005008163) #26	MAB21L4 (ENSEASG00005008159) #25	AGXT (ENSEASG00005008154) #24	KIF1A (ENSEASG00005007553) #23	ENSEASG00005007535 #22	GPR35 (ENSEASG00005033753) #20	CAPN10 (ENSEASG00005007529) #19	RNPEPL1 (ENSEASG00005007526) #18	DUSP28 (ENSEASG00005007525) #17	ANKMY1 (ENSEASG00005007496) #16	GPC1 (ENSEASG00005007474) #15	OTOS (ENSEASG00005007467) #14	COPS9 (ENSEASG00005029581) #13	ENSEASG00005030337	ENSEASG00005032886	ENSEASG00005035741 #12	ENSEASG00005023733 #12	NDUFA10 (ENSEASG00005007435) #10	HDAC4 (ENSEASG00005007428) #9	TWIST2 (ENSEASG00005037030) #8
Horse	MODERN SPECIES	27	ATG4B (ENSECAG00000006659)	THAP4 (ENSECAG00000000252) #37	BOK (ENSECAG00000000238) #36	STK25 (ENSECAG00000017650) #35	FARP2 (ENSECAG00000008144) #34	SEPTIN2 (ENSECAG00000017553) #33	HDLBP (ENSECAG00000012829) #32	PPP1R7 (ENSECAG00000017246) #31	PASK (ENSECAG00000011785) #29	MTERF4 (ENSECAG00000011622) #28	SNED1 (ENSECAG00000024612) #27	CROCC2 (ENSECAG00000023710) #26	MAB21L4 (ENSECAG00000023443) #25	AGXT (ENSECAG00000008006) #24	KIF1A (ENSECAG00000014504) #23	AQP12 (ENSECAG00000013785) #22	CAPN10 (ENSECAG00000038173) #19	RNPEPL1 (ENSECAG00000037977) #18	DUSP28 (ENSECAG00000038526) #17	ENSECAG00000047102	ANKMY1 (ENSECAG00000009464) #16	GPC1 (ENSECAG00000014427) #15	OTOS (ENSECAG00000034742) #14	ENSECAG00000057614 #13	OR9S21 (ENSECAG00000037760)	OR9S3 (ENSECAG00000038437)	OR6B2C (ENSECAG00000001007) #12	OR6B2C (ENSECAG00000054325) #12	NDUFA10 (ENSECAG00000021275) #10	HDAC4 (ENSECAG00000017406) #9	TWIST2 (ENSECAG00000038446) #8
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Suina	ANCESTRAL SPECIES	3	ENSGT00900000143170	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Pig	MODERN SPECIES	6	ENSSSCG00000034534	THAP4 (ENSSSCG00000016374) #37	BOK (ENSSSCG00000032684) #36	STK25 (ENSSSCG00000016372) #35	FARP2 (ENSSSCG00000016368) #34	SEPTIN2 (ENSSSCG00000016370) #33	HDLBP (ENSSSCG00000016379) #32	PPP1R7 (ENSSSCG00000016376) #30	PASK (ENSSSCG00000016378) #29	MTERF4 (ENSSSCG00000055566) #28	SNED1 (ENSSSCG00000016381) #27	CROCC2 (ENSSSCG00000036261) #26	ENSSSCG00000016400 #25	AGXT (ENSSSCG00000016402) #24	KIF1A (ENSSSCG00000016401) #23	ENSSSCG00000035083 #22	GPR35 (ENSSSCG00000040095) #20	CAPN10 (ENSSSCG00000037779) #19	RNPEPL1 (ENSSSCG00000016367) #18	DUSP28 (ENSSSCG00000028180) #17	ENSSSCG00000016365 #16	GPC1 (ENSSSCG00000016364) #15	OTOS (ENSSSCG00000047413) #14	COPS9 (ENSSSCG00000020790) #13	ENSSSCG00000037123	ENSSSCG00000045790	ENSSSCG00000038936	ENSSSCG00000020714	ENSSSCG00000060545	ENSSSCG00000032540	ENSSSCG00000051581
Chacoan peccary	MODERN SPECIES	41														ENSCWAG00000020840 #23	ENSCWAG00000020861 #23	ENSCWAG00000020874 #22	GPR35 (ENSCWAG00000020899) #20	CAPN10 (ENSCWAG00000020922) #19	RNPEPL1 (ENSCWAG00000020962) #18	DUSP28 (ENSCWAG00000020974) #17	ENSCWAG00000020981 #16	GPC1 (ENSCWAG00000020997) #15	OTOS (ENSCWAG00000021008) #14	COPS9 (ENSCWAG00000021016) #13	ENSCWAG00000021029	ENSCWAG00000021045	ENSCWAG00000021047	ENSCWAG00000021052	ENSCWAG00000021057	ENSCWAG00000021063 #12	NDUFA10 (ENSCWAG00000021075) #10
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Camelidae	ANCESTRAL SPECIES	87	ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Arabian camel	MODERN SPECIES	31	ENSCDRG00005000190 #36	STK25 (ENSCDRG00005000090) #35	ENSCDRG00005000066 #34	ENSCDRG00005021815 #34	SEPTIN2 (ENSCDRG00005021804) #33	HDLBP (ENSCDRG00005021789) #32	ENSCDRG00005021780	PASK (ENSCDRG00005021771) #29	MTERF4 (ENSCDRG00005021768) #28	ENSCDRG00005021764 #27	ENSCDRG00005021762	CROCC2 (ENSCDRG00005021759) #26	MAB21L4 (ENSCDRG00005021755) #25	AGXT (ENSCDRG00005021754) #24	KIF1A (ENSCDRG00005018268) #23	ENSCDRG00005017630 #22	GPR35 (ENSCDRG00005017612) #20	CAPN10 (ENSCDRG00005017541) #19	RNPEPL1 (ENSCDRG00005017490) #18	DUSP28 (ENSCDRG00005017470) #17	ENSCDRG00005017446 #16	ENSCDRG00005017414 #16	GPC1 (ENSCDRG00005017275) #15	ENSCDRG00005017236 #14	ENSCDRG00005017201 #13	ENSCDRG00005017178	NDUFA10 (ENSCDRG00005016805) #10	HDAC4 (ENSCDRG00005016731) #9	TWIST2 (ENSCDRG00005016712) #8	ASB1 (ENSCDRG00005016668) #7	TRAF3IP1 (ENSCDRG00005016550)
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Cetacea	ANCESTRAL SPECIES	14	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076.q.a #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00390000004965.v.b	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Blue whale	MODERN SPECIES	18	ENSBMSG00010010330	THAP4 (ENSBMSG00010010301) #37	BOK (ENSBMSG00010010287) #36	STK25 (ENSBMSG00010010267) #35	ENSBMSG00010010243 #34	ENSBMSG00010010208 #34	SEPTIN2 (ENSBMSG00010010182) #33	HDLBP (ENSBMSG00010010147) #32	ENSBMSG00010010024	ENSBMSG00010010004	ENSBMSG00010009987 #29	MTERF4 (ENSBMSG00010009975) #28	SNED1 (ENSBMSG00010009944) #27	AGXT (ENSBMSG00010009816) #24	KIF1A (ENSBMSG00010007348) #23	ENSBMSG00010006999 #22	GPR35 (ENSBMSG00010006985) #20	CAPN10 (ENSBMSG00010003227) #19	RNPEPL1 (ENSBMSG00010003134) #18	DUSP28 (ENSBMSG00010003124) #17	GPC1 (ENSBMSG00010003110) #15	OTOS (ENSBMSG00010003101) #14	ENSBMSG00010003093 #13	NDUFA10 (ENSBMSG00010003080) #10	ENSBMSG00010003068	ENSBMSG00010003060	HDAC4 (ENSBMSG00010003049) #9	TWIST2 (ENSBMSG00010003037) #8	ASB1 (ENSBMSG00010003016) #7	TRAF3IP1 (ENSBMSG00010002993)	PER2 (ENSBMSG00010002946)
Pecora	ANCESTRAL SPECIES	2	ENSGT00900000143170.a	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9
Percora_a	ANCESTRAL SPECIES	1	ENSGT00900000143170.a	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9
Bovidae	ANCESTRAL SPECIES	1	ENSGT00900000143170.a	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00960000190821	ENSGT00940000157440 #9
Caprinae	ANCESTRAL SPECIES	2	ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076.o.b #13	ENSGT01100000263494.a.a.a.a.b.a.e.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.b.a.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.a.f.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.a.f.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.b.a.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a
Goat	MODERN SPECIES	22	THAP4 (ENSCHIG00000020478) #37	ENSCHIG00000014554	BOK (ENSCHIG00000026381) #36	STK25 (ENSCHIG00000021875) #35	FARP2 (ENSCHIG00000027255) #34	SEPTIN2 (ENSCHIG00000026614) #33	HDLBP (ENSCHIG00000022364) #32	ENSCHIG00000012347	PASK (ENSCHIG00000007156) #29	MTERF4 (ENSCHIG00000022070) #28	SNED1 (ENSCHIG00000021345) #27	MAB21L4 (ENSCHIG00000026979) #25	AGXT (ENSCHIG00000022496) #24	ENSCHIG00000011947 #23	ENSCHIG00000023705 #23	ENSCHIG00000024491 #22	GPR35 (ENSCHIG00000004634) #20	CAPN10 (ENSCHIG00000016722) #19	RNPEPL1 (ENSCHIG00000007970) #18	DUSP28 (ENSCHIG00000021356) #17	ANKMY1 (ENSCHIG00000014244) #16	GPC1 (ENSCHIG00000025197) #15	OTOS (ENSCHIG00000017843) #14	ENSCHIG00000008166 #13	ENSCHIG00000020160	ENSCHIG00000025801	ENSCHIG00000026856	ENSCHIG00000016935	ENSCHIG00000006733	ENSCHIG00000021888	ENSCHIG00000014668
Rambouillet Sheep	MODERN SPECIES		GAL3ST2 (ENSOARG00020000059)	D2HGDH (ENSOARG00020000060)	ING5 (ENSOARG00020000064)	DTYMK (ENSOARG00020000065)	ATG4B (ENSOARG00020000066)	THAP4 (ENSOARG00020000069) #37	STK25 (ENSOARG00020000074) #35	SEPTIN2 (ENSOARG00020000087) #33	HDLBP (ENSOARG00020000111) #32	ENSOARG00020000194	SNED1 (ENSOARG00020000363) #27	CROCC2 (ENSOARG00020000704) #26	MAB21L4 (ENSOARG00020000754) #25	AGXT (ENSOARG00020000775) #24	KIF1A (ENSOARG00020000824) #23	ENSOARG00020000955 #22	GPR35 (ENSOARG00020000975) #20	CAPN10 (ENSOARG00020001024) #19	RNPEPL1 (ENSOARG00020001165) #18	DUSP28 (ENSOARG00020001183) #17	ENSOARG00020001195 #16	GPC1 (ENSOARG00020001209) #15	ENSOARG00020001243	ENSOARG00020001260	ENSOARG00020001271 #12	ENSOARG00020001276 #12	ENSOARG00020001283 #12	NDUFA10 (ENSOARG00020001299) #10	ENSOARG00020001326	HDAC4 (ENSOARG00020001352) #9	TWIST2 (ENSOARG00020001470) #8
Bovinae	ANCESTRAL SPECIES	1	ENSGT00900000143170.a	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.g #12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.h #12	ENSGT00390000016151 #10	ENSGT00960000190821
Bos	ANCESTRAL SPECIES		ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400.d #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.b.a.a.d	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.g #12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.h #12
Bos_a	ANCESTRAL SPECIES	65	ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400.d #18	ENSGT00940000160400.c #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.b.a.a.d	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.b.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.b.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b
Wild yak	MODERN SPECIES	1292	ENSBMUG00000011686 #37	BOK (ENSBMUG00000011678) #36	STK25 (ENSBMUG00000011663) #35	ENSBMUG00000011602 #34	SEPTIN2 (ENSBMUG00000011562) #33	HDLBP (ENSBMUG00000011512) #32	ENSBMUG00000011436	PASK (ENSBMUG00000011286) #29	MTERF4 (ENSBMUG00000011109) #28	SNED1 (ENSBMUG00000011079) #27	ENSBMUG00000010864 #26	MAB21L4 (ENSBMUG00000010834) #25	AGXT (ENSBMUG00000010816) #24	ENSBMUG00000010074 #23	ENSBMUG00000009636 #23	ENSBMUG00000009622 #22	CAPN10 (ENSBMUG00000009586) #19	RNPEPL1 (ENSBMUG00000009570) #18	ENSBMUG00000009555 #16	GPC1 (ENSBMUG00000009530) #15	OTOS (ENSBMUG00000009516) #14	COPS9 (ENSBMUG00000009506) #13	ENSBMUG00000009500
Domestic yak	MODERN SPECIES	22	BOK (ENSBGRG00000001796) #36	STK25 (ENSBGRG00000001737) #35	ENSBGRG00000001709 #34	ENSBGRG00000001659 #34	SEPTIN2 (ENSBGRG00000001628) #33	HDLBP (ENSBGRG00000001532) #32	PPP1R7 (ENSBGRG00000001494) #30	PASK (ENSBGRG00000001050) #29	MTERF4 (ENSBGRG00000000960) #28	SNED1 (ENSBGRG00000000812) #27	ENSBGRG00000000737 #26	MAB21L4 (ENSBGRG00000000729) #25	AGXT (ENSBGRG00000000706) #24	ENSBGRG00000000690	KIF1A (ENSBGRG00000000508) #23	ENSBGRG00000000458 #22	ENSBGRG00000000438 #20	CAPN10 (ENSBGRG00000000315) #19	RNPEPL1 (ENSBGRG00000000277) #18	ENSBGRG00000000268 #18	DUSP28 (ENSBGRG00000000259) #17	ENSBGRG00000000242 #16	GPC1 (ENSBGRG00000023361) #15	OTOS (ENSBGRG00000023306) #14	COPS9 (ENSBGRG00000023279) #13	ENSBGRG00000023162	ENSBGRG00000023144	ENSBGRG00000023111	ENSBGRG00000023078	ENSBGRG00000022991	ENSBGRG00000022979
Bos_b	ANCESTRAL SPECIES	45	ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400.d #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b
Hybrid Bos Indicus	MODERN SPECIES	22	ING5 (ENSBIXG00005018529)	DTYMK (ENSBIXG00005003000)	ATG4B (ENSBIXG00005018568)	THAP4 (ENSBIXG00005018636) #37	BOK (ENSBIXG00005018673) #36	STK25 (ENSBIXG00005018864) #35	FARP2 (ENSBIXG00005018965) #34	SEPTIN2 (ENSBIXG00005019099) #33	HDLBP (ENSBIXG00005019344) #32	ENSBIXG00005019419	PASK (ENSBIXG00005019482) #29	SNED1 (ENSBIXG00005019613) #27	CROCC2 (ENSBIXG00005019657) #26	MAB21L4 (ENSBIXG00005019680) #25	AGXT (ENSBIXG00005019708) #24	ENSBIXG00005019822 #22	ENSBIXG00005019852 #20	CAPN10 (ENSBIXG00005019942) #19	RNPEPL1 (ENSBIXG00005006882) #18	DUSP28 (ENSBIXG00005019981) #17	ENSBIXG00005020001 #16	KIF1A (ENSBIXG00005020167) #23	GPC1 (ENSBIXG00005020230) #15	ENSBIXG00005003395 #14	COPS9 (ENSBIXG00005020275) #13	ENSBIXG00005003411	ENSBIXG00005020312	ENSBIXG00005020329	ENSBIXG00005007837	ENSBIXG00005020349	ENSBIXG00005003434
Cow	MODERN SPECIES	22	ATG4B (ENSBTAG00000015401)	THAP4 (ENSBTAG00000013253) #37	BOK (ENSBTAG00000008711) #36	STK25 (ENSBTAG00000009676) #35	FARP2 (ENSBTAG00000013110) #34	SEPTIN2 (ENSBTAG00000002608) #33	HDLBP (ENSBTAG00000004315) #32	PPP1R7 (ENSBTAG00000000789)	PASK (ENSBTAG00000000785) #29	MTERF4 (ENSBTAG00000000784) #28	SNED1 (ENSBTAG00000014132) #27	CROCC2 (ENSBTAG00000005168) #26	MAB21L4 (ENSBTAG00000012374) #25	AGXT (ENSBTAG00000005797) #24	KIF1A (ENSBTAG00000011538) #23	AQP12 (ENSBTAG00000003389) #22	GPR35 (ENSBTAG00000030193) #20	CAPN10 (ENSBTAG00000002809) #19	RNPEPL1 (ENSBTAG00000007215) #18	DUSP28 (ENSBTAG00000049766) #17	ANKMY1 (ENSBTAG00000003593) #16	ENSBTAG00000051074 #16	GPC1 (ENSBTAG00000015996) #15	OTOS (ENSBTAG00000020592) #14	COPS9 (ENSBTAG00000010910) #13	OR9S15 (ENSBTAG00000053267)	OR9S40 (ENSBTAG00000054249)	OR9S36 (ENSBTAG00000048944)	AKAP17A (ENSBTAG00000054242)	P2RY8 (ENSBTAG00000047839)	IL3RA (ENSBTAG00000049808)
Siberian musk deer	MODERN SPECIES	1129															ENSMMSG00000008264 #23	ENSMMSG00000008229 #22	GPR35 (ENSMMSG00000008207) #20	CAPN10 (ENSMMSG00000007589) #19	RNPEPL1 (ENSMMSG00000007521) #18	DUSP28 (ENSMMSG00000007501) #17	ENSMMSG00000007420 #16	GPC1 (ENSMMSG00000007367) #15
Yarkand deer	MODERN SPECIES	12	DTYMK (ENSCHYG00000005997)	ATG4B (ENSCHYG00000005974)	ENSCHYG00000005951	THAP4 (ENSCHYG00000005901) #37	ENSCHYG00000005861 #36	STK25 (ENSCHYG00000005741) #35	FARP2 (ENSCHYG00000005254) #34	ENSCHYG00000005057 #33	HDLBP (ENSCHYG00000025206) #32	ENSCHYG00000025037	PASK (ENSCHYG00000024901) #29	SNED1 (ENSCHYG00000024133) #27	MAB21L4 (ENSCHYG00000023894) #25	AGXT (ENSCHYG00000023786) #24	KIF1A (ENSCHYG00000022459) #23	ENSCHYG00000022230 #22	ENSCHYG00000022175 #20	CAPN10 (ENSCHYG00000021266) #19	RNPEPL1 (ENSCHYG00000021066) #18	DUSP28 (ENSCHYG00000021024) #17	ANKMY1 (ENSCHYG00000020534) #16	GPC1 (ENSCHYG00000020320) #15	OTOS (ENSCHYG00000020260) #14	ENSCHYG00000020217 #13	ENSCHYG00000020172	ENSCHYG00000020132	ENSCHYG00000020095	ENSCHYG00000020057	ENSCHYG00000019996	NDUFA10 (ENSCHYG00000019837) #10	HDAC4 (ENSCHYG00000019442) #9
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00530000063816.d #22
Common shrew	MODERN SPECIES	12963																ENSSARG00000005010 #22
Hedgehog	MODERN SPECIES	7685																ENSEEUG00000009867 #22
Atlantogenata	DUPLICATION
Atlantogenata	ANCESTRAL SPECIES	300															ENSGT00510000050415.C	ENSGT00530000063816.d.a #22
Xenarthra	ANCESTRAL SPECIES	2016															ENSGT00510000050415.C	ENSGT00530000063816.d.a #22
Armadillo	MODERN SPECIES	4748														ENSDNOG00000042370	ENSDNOG00000037031	ENSDNOG00000047672 #22	ENSDNOG00000044403	KIF1A (ENSDNOG00000040374) #23
Atlantogenata	ANCESTRAL SPECIES	63	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d.b #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a
Afrotheria	ANCESTRAL SPECIES	74	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d.b #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a
Tenrec	MODERN SPECIES	15927																ENSETEG00000018870 #22
Afrotheria_a	ANCESTRAL SPECIES	73	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d.b #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a
Elephant	MODERN SPECIES	24	THAP4 (ENSLAFG00000018001) #37	BOK (ENSLAFG00000026100) #36	STK25 (ENSLAFG00000025786) #35	FARP2 (ENSLAFG00000014569) #34	ENSLAFG00000011964 #33	HDLBP (ENSLAFG00000014826) #32	ANO7 (ENSLAFG00000006955) #31	PPP1R7 (ENSLAFG00000003743) #30	PASK (ENSLAFG00000003737) #29	MTERF4 (ENSLAFG00000021960) #28	SNED1 (ENSLAFG00000003732) #27	CROCC2 (ENSLAFG00000027555) #26	MAB21L4 (ENSLAFG00000030543) #25	AGXT (ENSLAFG00000005246) #24	KIF1A (ENSLAFG00000029366) #23	ENSLAFG00000002017 #22	GPR35 (ENSLAFG00000020820) #20	CAPN10 (ENSLAFG00000014241) #19	RNPEPL1 (ENSLAFG00000028284) #18	DUSP28 (ENSLAFG00000002034) #17	ANKMY1 (ENSLAFG00000006905) #16	OTOS (ENSLAFG00000001594) #14	COPS9 (ENSLAFG00000028043) #13	ENSLAFG00000028058	ENSLAFG00000025808	ENSLAFG00000032555	ENSLAFG00000029602	ENSLAFG00000028548	ENSLAFG00000027695	ENSLAFG00000027069 ##12	ENSLAFG00000029483 #12
Xenarthra	ANCESTRAL SPECIES																	ENSGT00530000063816.d.b #22
Armadillo	MODERN SPECIES	2653															ENSDNOG00000036380	ENSDNOG00000038032 #22	STX7 (ENSDNOG00000000295)
Marsupialia	ANCESTRAL SPECIES	5	ENSGT01030000234598.a.a.a	ENSGT00940000161784	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000154388.f	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b	ENSGT00940000153249.b.d	ENSGT00940000156601
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT01030000234598.a.a.a	ENSGT00940000161784	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055.f	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b	ENSGT00940000153249.b.d	ENSGT00940000156601
Diprotodontia	ANCESTRAL SPECIES	23	ENSGT01030000234598.a.a.a	ENSGT00940000161784	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055.f	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b	ENSGT00940000153249.b.d	ENSGT00940000156601
Diprotodontia_a	ANCESTRAL SPECIES	24	ENSGT01030000234598.a.a.a	ENSGT00940000161784	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055.e.b	ENSGT00390000003022.e	ENSGT00940000156055.f	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b
Common wonbat	MODERN SPECIES	1139	TNK2 (ENSVURG00010007734)	TFRC (ENSVURG00010007776)	ENSVURG00010007793	SLC51A (ENSVURG00010007812)	PCYT1A (ENSVURG00010007821)	DYNLT2B (ENSVURG00010007833)	ENSVURG00010007843	UBXN7 (ENSVURG00010007856)	RNF168 (ENSVURG00010007878)	WDR53 (ENSVURG00010007886)	FBXO45 (ENSVURG00010007892)	NRROS (ENSVURG00010007903)	CEP19 (ENSVURG00010007914)	PIGX (ENSVURG00010007925)	PAK2 (ENSVURG00010007934)	ENSVURG00010007953 #22	ENSVURG00010007957	ENSVURG00010007970	ENSVURG00010007978	ENSVURG00010007987	ENSVURG00010007994	SLCO2A1 (ENSVURG00010008188)	RYK (ENSVURG00010008208)	AMOTL2 (ENSVURG00010008268)	ANAPC13 (ENSVURG00010008286)	CEP63 (ENSVURG00010008298)	KY (ENSVURG00010008351)	ENSVURG00010008400	ENSVURG00010008412	PPP2R3A (ENSVURG00010008434)	MSL2 (ENSVURG00010008446)
Wallaby	MODERN SPECIES	12406																ENSMEUG00000006659 #22
Opossum	MODERN SPECIES	3	TFRC (ENSMODG00000018427)	ENSMODG00000018429	SLC51A (ENSMODG00000018430)	PCYT1A (ENSMODG00000018432)	TM4SF19 (ENSMODG00000018434)	ENSMODG00000018437	RNF168 (ENSMODG00000018442)	SMCO1 (ENSMODG00000046643)	WDR53 (ENSMODG00000018445)	FBXO45 (ENSMODG00000042553)	NRROS (ENSMODG00000018447)	ENSMODG00000018451	CEP19 (ENSMODG00000018453)	ENSMODG00000018455	ENSMODG00000018459	ENSMODG00000018460 #22	ENSMODG00000018462	ENSMODG00000018479	ENSMODG00000028043	ENSMODG00000033772	NDUFB11 (ENSMODG00000018491)	SRPRB (ENSMODG00000018493)	ENSMODG00000018494	SLCO2A1 (ENSMODG00000018498)	ENSMODG00000049702	RYK (ENSMODG00000018505)	AMOTL2 (ENSMODG00000018508)	ENSMODG00000025019	ANAPC13 (ENSMODG00000018510)	CEP63 (ENSMODG00000018511)	KY (ENSMODG00000018514)