Chordata	ANCESTRAL SPECIES																	ENSGT00530000063816 #22
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00530000063816.d #22
Gnathostomata	ANCESTRAL SPECIES	876															ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00950000182923.B.a	ENSGT00390000010564
Euteleostomi	ANCESTRAL SPECIES	492											ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00950000182923.B.a	ENSGT00390000010564
Sarcopterygii	ANCESTRAL SPECIES	186	ENSGT00510000047981.d	ENSGT00940000155297	ENSGT00390000002887	ENSGT00940000153190.B.b	ENSGT00940000156577	ENSGT00940000155119	ENSGT01080000257336.a.c.b	ENSGT00940000159656	ENSGT00940000156055	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a
Tetrapoda	ANCESTRAL SPECIES	81	ENSGT00940000160898	ENSGT00940000155297	ENSGT00390000002887	ENSGT00940000153190.B.b	ENSGT00940000156577	ENSGT00940000155119	ENSGT01080000257336.a.c.b	ENSGT00940000159656	ENSGT00940000156055	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a
Amniota	ANCESTRAL SPECIES	43	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00510000047981.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00510000048354	ENSGT00940000156601
Mammalia	ANCESTRAL SPECIES	49	ENSGT01030000234598.a.a.a	ENSGT00940000161784	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b	ENSGT00940000153249.b.d	ENSGT00940000156601
Theria	ANCESTRAL SPECIES	40	ENSGT01030000234598.a.a.a	ENSGT00940000161784	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000154388.f	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b	ENSGT00940000153249.b.d	ENSGT00940000156601
Eutheria	ANCESTRAL SPECIES	39	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Primates	ANCESTRAL SPECIES	13	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00940000156342	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00940000156342	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Hominidae	ANCESTRAL SPECIES	17	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147607	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT00910000148902	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147607	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT00910000148902	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147607	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Human	DUPLICATION
Human	MODERN SPECIES	11	ASB1 (ENSG00000065802) #7	TWIST2 (ENSG00000233608) #8	HDAC4 (ENSG00000068024) #9	NDUFA10 (ENSG00000130414) #10	OR6B2 (ENSG00000182083) #11	OR6B3 (ENSG00000178586) #12	COPS9 (ENSG00000172428) #13	OTOS (ENSG00000178602) #14	GPC1 (ENSG00000063660) #15	ANKMY1 (ENSG00000144504) #16	DUSP28 (ENSG00000188542) #17	RNPEPL1 (ENSG00000142327) #18	CAPN10 (ENSG00000142330) #19	GPR35 (ENSG00000178623) #20	AQP12B (ENSG00000185176) #21	AQP12A (ENSG00000184945) #22	KIF1A (ENSG00000130294) #23	AGXT (ENSG00000172482) #24	MAB21L4 (ENSG00000172478) #25	CROCC2 (ENSG00000226321) #26	SNED1 (ENSG00000162804) #27	MTERF4 (ENSG00000122085) #28	PASK (ENSG00000115687) #29	PPP1R7 (ENSG00000115685) #30	ANO7 (ENSG00000146205) #31	HDLBP (ENSG00000115677) #32	SEPTIN2 (ENSG00000168385) #33	FARP2 (ENSG00000006607) #34	STK25 (ENSG00000115694) #35	BOK (ENSG00000176720) #36	THAP4 (ENSG00000176946) #37
Human	MODERN SPECIES	11	BOK (ENSG00000176720) #36	STK25 (ENSG00000115694) #35	FARP2 (ENSG00000006607) #34	SEPTIN2 (ENSG00000168385) #33	HDLBP (ENSG00000115677) #32	ANO7 (ENSG00000146205) #31	PPP1R7 (ENSG00000115685) #30	PASK (ENSG00000115687) #29	MTERF4 (ENSG00000122085) #28	SNED1 (ENSG00000162804) #27	CROCC2 (ENSG00000226321) #26	MAB21L4 (ENSG00000172478) #25	AGXT (ENSG00000172482) #24	KIF1A (ENSG00000130294) #23	AQP12A (ENSG00000184945) #22	AQP12B (ENSG00000185176) #21	GPR35 (ENSG00000178623) #20	CAPN10 (ENSG00000142330) #19	RNPEPL1 (ENSG00000142327) #18	DUSP28 (ENSG00000188542) #17	ANKMY1 (ENSG00000144504) #16	GPC1 (ENSG00000063660) #15	OTOS (ENSG00000178602) #14	COPS9 (ENSG00000172428) #13	OR6B3 (ENSG00000178586) #12	OR6B2 (ENSG00000182083) #11	NDUFA10 (ENSG00000130414) #10	HDAC4 (ENSG00000068024) #9	TWIST2 (ENSG00000233608) #8	ASB1 (ENSG00000065802) #7	TRAF3IP1 (ENSG00000204104)
Pan	ANCESTRAL SPECIES	12	ENSGT00940000153969.b #7	ENSGT00940000157440 #9	ENSGT01100000266980	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT00910000148902	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147607	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	15	FARP2 (ENSPTRG00000013123) #34	SEPTIN2 (ENSPTRG00000023481) #33	ENSPTRG00000048829	HDLBP (ENSPTRG00000013121) #32	ANO7 (ENSPTRG00000013119) #31	PPP1R7 (ENSPTRG00000013118) #30	PASK (ENSPTRG00000013117) #29	MTERF4 (ENSPTRG00000013116) #28	SNED1 (ENSPTRG00000013115) #27	CROCC2 (ENSPTRG00000041321) #26	MAB21L4 (ENSPTRG00000013114) #25	AGXT (ENSPTRG00000013113) #24	ENSPTRG00000046079	KIF1A (ENSPTRG00000013112) #23	ENSPTRG00000048988 #22	ENSPTRG00000043091 #22	GPR35 (ENSPTRG00000028943) #20	CAPN10 (ENSPTRG00000013108) #19	RNPEPL1 (ENSPTRG00000013107) #18	DUSP28 (ENSPTRG00000051613) #17	ANKMY1 (ENSPTRG00000013105) #16	GPC1 (ENSPTRG00000045317) #15	OTOS (ENSPTRG00000013103) #14	COPS9 (ENSPTRG00000013102) #13	NDUFA10 (ENSPTRG00000013099) #10	ENSPTRG00000040855	HDAC4 (ENSPTRG00000013097) #9	ASB1 (ENSPTRG00000049853) #7	TRAF3IP1 (ENSPTRG00000028947)	PER2 (ENSPTRG00000013092)	HES6 (ENSPTRG00000043334)
Chimpanzee	MODERN SPECIES	15	PER2 (ENSPTRG00000013092)	TRAF3IP1 (ENSPTRG00000028947)	ASB1 (ENSPTRG00000049853) #7	HDAC4 (ENSPTRG00000013097) #9	ENSPTRG00000040855	NDUFA10 (ENSPTRG00000013099) #10	COPS9 (ENSPTRG00000013102) #13	OTOS (ENSPTRG00000013103) #14	GPC1 (ENSPTRG00000045317) #15	ANKMY1 (ENSPTRG00000013105) #16	DUSP28 (ENSPTRG00000051613) #17	RNPEPL1 (ENSPTRG00000013107) #18	CAPN10 (ENSPTRG00000013108) #19	GPR35 (ENSPTRG00000028943) #20	ENSPTRG00000043091 #22	ENSPTRG00000048988 #22	KIF1A (ENSPTRG00000013112) #23	ENSPTRG00000046079	AGXT (ENSPTRG00000013113) #24	MAB21L4 (ENSPTRG00000013114) #25	CROCC2 (ENSPTRG00000041321) #26	SNED1 (ENSPTRG00000013115) #27	MTERF4 (ENSPTRG00000013116) #28	PASK (ENSPTRG00000013117) #29	PPP1R7 (ENSPTRG00000013118) #30	ANO7 (ENSPTRG00000013119) #31	HDLBP (ENSPTRG00000013121) #32	ENSPTRG00000048829	SEPTIN2 (ENSPTRG00000023481) #33	FARP2 (ENSPTRG00000013123) #34	STK25 (ENSPTRG00000013125) #35
Bonobo	MODERN SPECIES	15	TRAF3IP1 (ENSPPAG00000034877)	ASB1 (ENSPPAG00000037555) #7	HDAC4 (ENSPPAG00000035780) #9	ENSPPAG00000014240	ENSPPAG00000037987 #10	OR6B2 (ENSPPAG00000005084) #11	OR6B3 (ENSPPAG00000032545) #12	ENSPPAG00000039796 #13	OTOS (ENSPPAG00000027930) #14	ENSPPAG00000035071	GPC1 (ENSPPAG00000036753) #15	ANKMY1 (ENSPPAG00000020736) #16	ENSPPAG00000035565 #18	CAPN10 (ENSPPAG00000031063) #19	GPR35 (ENSPPAG00000041284) #20	ENSPPAG00000042962 #22	ENSPPAG00000027852	ENSPPAG00000029702	KIF1A (ENSPPAG00000024628) #23	AGXT (ENSPPAG00000027443) #24	MAB21L4 (ENSPPAG00000040432) #25	CROCC2 (ENSPPAG00000034255) #26	SNED1 (ENSPPAG00000037340) #27	MTERF4 (ENSPPAG00000041007) #28	PASK (ENSPPAG00000035044) #29	PPP1R7 (ENSPPAG00000040077) #30	ANO7 (ENSPPAG00000043317) #31	HDLBP (ENSPPAG00000023318) #32	ENSPPAG00000038175	SEPTIN2 (ENSPPAG00000034127) #33	FARP2 (ENSPPAG00000041862) #34
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	15	FARP2 (ENSGGOG00000004259) #34	SEPTIN2 (ENSGGOG00000004597) #33	HDLBP (ENSGGOG00000004392) #32	ANO7 (ENSGGOG00000004380) #31	PPP1R7 (ENSGGOG00000012805) #30	PASK (ENSGGOG00000012790) #29	MTERF4 (ENSGGOG00000036917) #28	SNED1 (ENSGGOG00000012750) #27	CROCC2 (ENSGGOG00000041336) #26	MAB21L4 (ENSGGOG00000004020) #25	AGXT (ENSGGOG00000014690) #24	ENSGGOG00000043179	KIF1A (ENSGGOG00000013469) #23	ENSGGOG00000036196	ENSGGOG00000027009 #22	ENSGGOG00000013461 #22	GPR35 (ENSGGOG00000026708) #20	CAPN10 (ENSGGOG00000001489) #19	RNPEPL1 (ENSGGOG00000001484) #18	DUSP28 (ENSGGOG00000040849) #17	ANKMY1 (ENSGGOG00000001478) #16	GPC1 (ENSGGOG00000001475) #15	ENSGGOG00000041362	OTOS (ENSGGOG00000005393) #14	COPS9 (ENSGGOG00000005387) #13	OR6B2 (ENSGGOG00000015878) #11	NDUFA10 (ENSGGOG00000001432) #10	HDAC4 (ENSGGOG00000014323) #9	ENSGGOG00000012588 #7	TRAF3IP1 (ENSGGOG00000010361)	PER2 (ENSGGOG00000004542)
Gorilla	MODERN SPECIES	15	TRAF3IP1 (ENSGGOG00000010361)	ENSGGOG00000012588 #7	HDAC4 (ENSGGOG00000014323) #9	NDUFA10 (ENSGGOG00000001432) #10	OR6B2 (ENSGGOG00000015878) #11	COPS9 (ENSGGOG00000005387) #13	OTOS (ENSGGOG00000005393) #14	ENSGGOG00000041362	GPC1 (ENSGGOG00000001475) #15	ANKMY1 (ENSGGOG00000001478) #16	DUSP28 (ENSGGOG00000040849) #17	RNPEPL1 (ENSGGOG00000001484) #18	CAPN10 (ENSGGOG00000001489) #19	GPR35 (ENSGGOG00000026708) #20	ENSGGOG00000013461 #22	ENSGGOG00000027009 #22	ENSGGOG00000036196	KIF1A (ENSGGOG00000013469) #23	ENSGGOG00000043179	AGXT (ENSGGOG00000014690) #24	MAB21L4 (ENSGGOG00000004020) #25	CROCC2 (ENSGGOG00000041336) #26	SNED1 (ENSGGOG00000012750) #27	MTERF4 (ENSGGOG00000036917) #28	PASK (ENSGGOG00000012790) #29	PPP1R7 (ENSGGOG00000012805) #30	ANO7 (ENSGGOG00000004380) #31	HDLBP (ENSGGOG00000004392) #32	SEPTIN2 (ENSGGOG00000004597) #33	FARP2 (ENSGGOG00000004259) #34	ENSGGOG00000004267 #35
Orangutan	DUPLICATION
Orangutan	MODERN SPECIES	15	FARP2 (ENSPPYG00000013354) #34	SEPTIN2 (ENSPPYG00000013353) #33	HDLBP (ENSPPYG00000013351) #32	ANO7 (ENSPPYG00000013350) #31	PPP1R7 (ENSPPYG00000013349) #30	PASK (ENSPPYG00000013348) #29	MTERF4 (ENSPPYG00000013347) #28	SNED1 (ENSPPYG00000013346) #27	CROCC2 (ENSPPYG00000036734) #26	MAB21L4 (ENSPPYG00000013345) #25	AGXT (ENSPPYG00000030682) #24	KIF1A (ENSPPYG00000013343) #23	ENSPPYG00000039791	ENSPPYG00000039693 #22	ENSPPYG00000040193	ENSPPYG00000013384 #22	GPR35 (ENSPPYG00000013341) #20	CAPN10 (ENSPPYG00000013340) #19	RNPEPL1 (ENSPPYG00000013339) #18	DUSP28 (ENSPPYG00000030765) #17	ANKMY1 (ENSPPYG00000013337) #16	GPC1 (ENSPPYG00000013336) #15	OTOS (ENSPPYG00000013335) #14	ENSPPYG00000039891 #13	OR6B2 (ENSPPYG00000013333) #11	NDUFA10 (ENSPPYG00000013332) #10	HDAC4 (ENSPPYG00000013328) #9	TWIST2 (ENSPPYG00000039133) #8	ASB1 (ENSPPYG00000013326) #7	TRAF3IP1 (ENSPPYG00000013325)	PER2 (ENSPPYG00000013324)
Orangutan	MODERN SPECIES	15	ASB1 (ENSPPYG00000013326) #7	TWIST2 (ENSPPYG00000039133) #8	HDAC4 (ENSPPYG00000013328) #9	NDUFA10 (ENSPPYG00000013332) #10	OR6B2 (ENSPPYG00000013333) #11	ENSPPYG00000039891 #13	OTOS (ENSPPYG00000013335) #14	GPC1 (ENSPPYG00000013336) #15	ANKMY1 (ENSPPYG00000013337) #16	DUSP28 (ENSPPYG00000030765) #17	RNPEPL1 (ENSPPYG00000013339) #18	CAPN10 (ENSPPYG00000013340) #19	GPR35 (ENSPPYG00000013341) #20	ENSPPYG00000013384 #22	ENSPPYG00000040193	ENSPPYG00000039693 #22	ENSPPYG00000039791	KIF1A (ENSPPYG00000013343) #23	AGXT (ENSPPYG00000030682) #24	MAB21L4 (ENSPPYG00000013345) #25	CROCC2 (ENSPPYG00000036734) #26	SNED1 (ENSPPYG00000013346) #27	MTERF4 (ENSPPYG00000013347) #28	PASK (ENSPPYG00000013348) #29	PPP1R7 (ENSPPYG00000013349) #30	ANO7 (ENSPPYG00000013350) #31	HDLBP (ENSPPYG00000013351) #32	SEPTIN2 (ENSPPYG00000013353) #33	FARP2 (ENSPPYG00000013354) #34	STK25 (ENSPPYG00000025879) #35	BOK (ENSPPYG00000013355) #36
Gibbon	MODERN SPECIES	14	ENSNLEG00000032222	ENSNLEG00000027732	PER2 (ENSNLEG00000011250)	TRAF3IP1 (ENSNLEG00000011298)	ASB1 (ENSNLEG00000011336) #7	TWIST2 (ENSNLEG00000011342) #8	HDAC4 (ENSNLEG00000013474) #9	ENSNLEG00000013509 #10	COPS9 (ENSNLEG00000030619) #13	OTOS (ENSNLEG00000013565) #14	ENSNLEG00000013571 #15	ANKMY1 (ENSNLEG00000013573) #16	DUSP28 (ENSNLEG00000013588) #17	RNPEPL1 (ENSNLEG00000013589) #18	CAPN10 (ENSNLEG00000013631) #19	ENSNLEG00000013685 #22	ENSNLEG00000035307	KIF1A (ENSNLEG00000036232) #23	AGXT (ENSNLEG00000013694) #24	ENSNLEG00000013707 #25	CROCC2 (ENSNLEG00000029188) #26	SNED1 (ENSNLEG00000013708) #27	MTERF4 (ENSNLEG00000013727) #28	PASK (ENSNLEG00000013731) #29	PPP1R7 (ENSNLEG00000013766) #30	ANO7 (ENSNLEG00000013806) #31	HDLBP (ENSNLEG00000013818) #32	SEPTIN2 (ENSNLEG00000013873) #33	FARP2 (ENSNLEG00000013956) #34	STK25 (ENSNLEG00000013968) #35	BOK (ENSNLEG00000007762) #36
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00910000147677	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00910000147677	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00910000147677	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00510000050415.C	ENSGT00940000174573	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00910000147677	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00510000050415.C	ENSGT00940000174573	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Pig-tailed macaque	MODERN SPECIES	525	ENSMNEG00000034335	TWIST2 (ENSMNEG00000028131) #8	HDAC4 (ENSMNEG00000033168) #9	NDUFA10 (ENSMNEG00000021553) #10	ENSMNEG00000044929	ENSMNEG00000040555 #13	OTOS (ENSMNEG00000039552) #14	GPC1 (ENSMNEG00000002512) #15	ENSMNEG00000004238	ANKMY1 (ENSMNEG00000031190) #16	DUSP28 (ENSMNEG00000003681) #17	RNPEPL1 (ENSMNEG00000037037) #18	CAPN10 (ENSMNEG00000027814) #19	GPR35 (ENSMNEG00000015349) #20	ENSMNEG00000032577	ENSMNEG00000031349 #22	KIF1A (ENSMNEG00000036707) #23	AGXT (ENSMNEG00000039228) #24	MAB21L4 (ENSMNEG00000034905) #25	CROCC2 (ENSMNEG00000029986) #26	SNED1 (ENSMNEG00000042251) #27	MTERF4 (ENSMNEG00000040061) #28	PASK (ENSMNEG00000030367) #29	ENSMNEG00000005914	ANO7 (ENSMNEG00000033411) #31	HDLBP (ENSMNEG00000024260) #32	SEPTIN2 (ENSMNEG00000004313) #33	ENSMNEG00000013427	FARP2 (ENSMNEG00000030159) #34	STK25 (ENSMNEG00000000451) #35	BOK (ENSMNEG00000029533) #36
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.d #12	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00910000147677	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00510000050415.C	ENSGT00940000174573	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Crab-eating macaque	MODERN SPECIES	3	TRAF3IP1 (ENSMFAG00000002763)	ASB1 (ENSMFAG00000038837) #7	HDAC4 (ENSMFAG00000033242) #9	NDUFA10 (ENSMFAG00000001486) #10	COPS9 (ENSMFAG00000000784) #13	OR6B3 (ENSMFAG00000054218) #12	OTOS (ENSMFAG00000038320) #14	GPC1 (ENSMFAG00000032000) #15	ANKMY1 (ENSMFAG00000014439) #16	ENSMFAG00000030856	RNPEPL1 (ENSMFAG00000038176) #18	CAPN10 (ENSMFAG00000031448) #19	ENSMFAG00000048512 #20	ENSMFAG00000048748	ENSMFAG00000051250	ENSMFAG00000036051 #22	ENSMFAG00000014109	KIF1A (ENSMFAG00000038236) #23	AGXT (ENSMFAG00000041893) #24	MAB21L4 (ENSMFAG00000041210) #25	ENSMFAG00000054710 #27	ENSMFAG00000001771 #27	MTERF4 (ENSMFAG00000026775) #28	PASK (ENSMFAG00000037737) #29	ENSMFAG00000038150	ANO7 (ENSMFAG00000001859) #31	HDLBP (ENSMFAG00000033641) #32	SEPTIN2 (ENSMFAG00000039700) #33	FARP2 (ENSMFAG00000044112) #34	STK25 (ENSMFAG00000044279) #35	BOK (ENSMFAG00000000539) #36
Rhesus	MODERN SPECIES	3	ASB1 (ENSMMUG00000009511) #7	TWIST2 (ENSMMUG00000021909) #8	HDAC4 (ENSMMUG00000006077) #9	NDUFA10 (ENSMMUG00000010382) #10	OR6B2 (ENSMMUG00000010383) #11	OR6B3 (ENSMMUG00000049471) #12	OTOS (ENSMMUG00000056837) #14	GPC1 (ENSMMUG00000056083) #15	ANKMY1 (ENSMMUG00000014835) #16	DUSP28 (ENSMMUG00000037810) #17	RNPEPL1 (ENSMMUG00000015625) #18	CAPN10 (ENSMMUG00000015628) #19	GPR35 (ENSMMUG00000015419) #20	ENSMMUG00000062821	ENSMMUG00000061756	AQP12 (ENSMMUG00000031103) #22	KIF1A (ENSMMUG00000021802) #23	AGXT (ENSMMUG00000023435) #24	MAB21L4 (ENSMMUG00000011416) #25	CROCC2 (ENSMMUG00000041795) #26	SNED1 (ENSMMUG00000004968) #27	MTERF4 (ENSMMUG00000006835) #28	PASK (ENSMMUG00000016207) #29	PPP1R7 (ENSMMUG00000016209)	ANO7 (ENSMMUG00000001721) #31	HDLBP (ENSMMUG00000004730) #32	SEPTIN2 (ENSMMUG00000004736) #33	FARP2 (ENSMMUG00000001313) #34	STK25 (ENSMMUG00000001314) #35	BOK (ENSMMUG00000056380) #36	THAP4 (ENSMMUG00000005662) #37
Cercopithecinae_b	ANCESTRAL SPECIES	60														ENSGT00510000050415.C	ENSGT00940000174573	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00390000018318.u.b.a.a.o	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Olive baboon	MODERN SPECIES	1	BOK (ENSPANG00000034368) #36	STK25 (ENSPANG00000010069) #35	FARP2 (ENSPANG00000019972) #34	SEPTIN2 (ENSPANG00000007917) #33	HDLBP (ENSPANG00000011832) #32	ENSPANG00000046499 #31	ENSPANG00000009640	PASK (ENSPANG00000021941) #29	MTERF4 (ENSPANG00000014465) #28	SNED1 (ENSPANG00000012985) #27	MAB21L4 (ENSPANG00000013759) #25	AGXT (ENSPANG00000019415) #24	KIF1A (ENSPANG00000024239) #23	ENSPANG00000048005	ENSPANG00000045273	ENSPANG00000020307 #22	GPR35 (ENSPANG00000007268) #20	CAPN10 (ENSPANG00000015218) #19	RNPEPL1 (ENSPANG00000024377) #18	ENSPANG00000043078 #17	ANKMY1 (ENSPANG00000015840) #16	GPC1 (ENSPANG00000024475) #15	ENSPANG00000048629	OTOS (ENSPANG00000013766) #14	COPS9 (ENSPANG00000032848) #13	ENSPANG00000039926	OR6B3 (ENSPANG00000009568) #12	OR6B2 (ENSPANG00000037043) #11	NDUFA10 (ENSPANG00000017314) #10	ENSPANG00000047989	HDAC4 (ENSPANG00000001165) #9
Cercopithecinae_d	ANCESTRAL SPECIES	158															ENSGT00510000050415.C	ENSGT00530000063816.d #22	ENSGT00910000147517	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00390000018318.u.b.a.a.o	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Sooty mangabey	MODERN SPECIES	107	STK25 (ENSCATG00000044719) #35	FARP2 (ENSCATG00000032346) #34	SEPTIN2 (ENSCATG00000033533) #33	HDLBP (ENSCATG00000039363) #32	ANO7 (ENSCATG00000037143) #31	ENSCATG00000016069	PASK (ENSCATG00000039320) #29	MTERF4 (ENSCATG00000021725) #28	SNED1 (ENSCATG00000014152) #27	CROCC2 (ENSCATG00000043230) #26	MAB21L4 (ENSCATG00000000794) #25	AGXT (ENSCATG00000008694) #24	KIF1A (ENSCATG00000037667) #23	ENSCATG00000020561	ENSCATG00000042321	ENSCATG00000032057 #22	GPR35 (ENSCATG00000038596) #20	CAPN10 (ENSCATG00000037502) #19	RNPEPL1 (ENSCATG00000042322) #18	DUSP28 (ENSCATG00000045199) #17	ANKMY1 (ENSCATG00000016475) #16	GPC1 (ENSCATG00000031393) #15	OTOS (ENSCATG00000040686) #14	COPS9 (ENSCATG00000040196) #13	NDUFA10 (ENSCATG00000030083) #10	ENSCATG00000001546	HDAC4 (ENSCATG00000035774) #9	TWIST2 (ENSCATG00000021169) #8	ASB1 (ENSCATG00000039506) #7	TRAF3IP1 (ENSCATG00000031689)	PER2 (ENSCATG00000029774)
Drill	MODERN SPECIES	1204																ENSMLEG00000039524 #22	ENSMLEG00000016441	KIF1A (ENSMLEG00000005316) #23	AGXT (ENSMLEG00000034965) #24	MAB21L4 (ENSMLEG00000041870) #25	CROCC2 (ENSMLEG00000036528) #26	SNED1 (ENSMLEG00000031237) #27	MTERF4 (ENSMLEG00000035945) #28	PASK (ENSMLEG00000042258) #29	ENSMLEG00000033467	ANO7 (ENSMLEG00000004758) #31	HDLBP (ENSMLEG00000042734) #32	SEPTIN2 (ENSMLEG00000043469) #33	ENSMLEG00000019175	ENSMLEG00000000708	FARP2 (ENSMLEG00000031088) #34
Vervet Monkey	MODERN SPECIES	1	STK25 (ENSCSAG00000005762) #35	FARP2 (ENSCSAG00000005767) #34	SEPTIN2 (ENSCSAG00000005773) #33	HDLBP (ENSCSAG00000005781) #32	ANO7 (ENSCSAG00000005815) #31	ENSCSAG00000005841	PASK (ENSCSAG00000005843) #29	MTERF4 (ENSCSAG00000005845) #28	SNED1 (ENSCSAG00000005891) #27	ENSCSAG00000005915	ENSCSAG00000005919 #26	MAB21L4 (ENSCSAG00000005921) #25	AGXT (ENSCSAG00000005927) #24	KIF1A (ENSCSAG00000005934) #23	ENSCSAG00000005941	ENSCSAG00000005945 #22	GPR35 (ENSCSAG00000018807) #20	CAPN10 (ENSCSAG00000005947) #19	RNPEPL1 (ENSCSAG00000005950) #18	DUSP28 (ENSCSAG00000005952) #17	ANKMY1 (ENSCSAG00000005962) #16	GPC1 (ENSCSAG00000005972) #15	OTOS (ENSCSAG00000005977) #14	OR6B3 (ENSCSAG00000018806) #12	OR6B2 (ENSCSAG00000018803) #11	NDUFA10 (ENSCSAG00000005983) #10	ENSCSAG00000005986	HDAC4 (ENSCSAG00000006011) #9	TWIST2 (ENSCSAG00000018801) #8	ASB1 (ENSCSAG00000006016) #7	TRAF3IP1 (ENSCSAG00000006023)
Rhinopithecus	ANCESTRAL SPECIES	45	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00910000147607	ENSGT00510000050415.C	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT00910000147677	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.c #11	ENSGT00390000016151.m #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000154185.l.a.b.d	ENSGT00940000153969.b #7
Black snub-nosed monkey	MODERN SPECIES	2132			FARP2 (ENSRBIG00000032798) #34	SEPTIN2 (ENSRBIG00000032420) #33	HDLBP (ENSRBIG00000041381) #32	ANO7 (ENSRBIG00000032598) #31	ENSRBIG00000020885	PASK (ENSRBIG00000034208) #29	MTERF4 (ENSRBIG00000035413) #28	SNED1 (ENSRBIG00000037462) #27	MAB21L4 (ENSRBIG00000041268) #25	AGXT (ENSRBIG00000039948) #24	KIF1A (ENSRBIG00000033952) #23	ENSRBIG00000041407	ENSRBIG00000039215	ENSRBIG00000039030 #22	CAPN10 (ENSRBIG00000033107) #19	RNPEPL1 (ENSRBIG00000043916) #18	DUSP28 (ENSRBIG00000037723) #17	ANKMY1 (ENSRBIG00000044573) #16
Golden snub-nosed monkey	MODERN SPECIES	3347																ENSRROG00000033165 #22	GPR35 (ENSRROG00000040367) #20	CAPN10 (ENSRROG00000041695) #19	RNPEPL1 (ENSRROG00000029998) #18	DUSP28 (ENSRROG00000019423) #17	ANKMY1 (ENSRROG00000035663) #16	ENSRROG00000022577	GPC1 (ENSRROG00000029900) #15
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Cebidae	ANCESTRAL SPECIES	11	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059.s #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b.a #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Capuchin	MODERN SPECIES	443	BOK (ENSCCAG00000028486) #36	STK25 (ENSCCAG00000021446) #35	FARP2 (ENSCCAG00000025705) #34	ENSCCAG00000034359	SEPTIN2 (ENSCCAG00000031252) #33	ENSCCAG00000023361 #32	ANO7 (ENSCCAG00000033209) #31	PPP1R7 (ENSCCAG00000025668) #30	PASK (ENSCCAG00000026306) #29	MTERF4 (ENSCCAG00000028780) #28	SNED1 (ENSCCAG00000027118) #27	CROCC2 (ENSCCAG00000027162) #26	MAB21L4 (ENSCCAG00000029712) #25	AGXT (ENSCCAG00000028181) #24	KIF1A (ENSCCAG00000027377) #23	ENSCCAG00000030373 #22	GPR35 (ENSCCAG00000022914) #20	CAPN10 (ENSCCAG00000037048) #19	RNPEPL1 (ENSCCAG00000034926) #18	DUSP28 (ENSCCAG00000038079) #17	ANKMY1 (ENSCCAG00000024339) #16	GPC1 (ENSCCAG00000035734) #15
Bolivian squirrel monkey	MODERN SPECIES	128	BOK (ENSSBOG00000024648) #36	STK25 (ENSSBOG00000027024) #35	FARP2 (ENSSBOG00000034642) #34	SEPTIN2 (ENSSBOG00000016731) #33	ENSSBOG00000029714 #32	ANO7 (ENSSBOG00000028401) #31	ENSSBOG00000001483 #30	PASK (ENSSBOG00000029892) #29	MTERF4 (ENSSBOG00000025209) #28	SNED1 (ENSSBOG00000034978) #27	CROCC2 (ENSSBOG00000031400) #26	ENSSBOG00000025032	AGXT (ENSSBOG00000036014) #24	ENSSBOG00000032208	KIF1A (ENSSBOG00000022876) #23	ENSSBOG00000003192 #22	GPR35 (ENSSBOG00000025234) #20	CAPN10 (ENSSBOG00000027896) #19	RNPEPL1 (ENSSBOG00000034450) #18	DUSP28 (ENSSBOG00000035216) #17	ANKMY1 (ENSSBOG00000025649) #16	GPC1 (ENSSBOG00000025749) #15	OTOS (ENSSBOG00000015724) #14	ENSSBOG00000032572	ENSSBOG00000032512 #12	NDUFA10 (ENSSBOG00000034900) #10	HDAC4 (ENSSBOG00000027074) #9	TWIST2 (ENSSBOG00000004261) #8	ASB1 (ENSSBOG00000023503) #7	TRAF3IP1 (ENSSBOG00000029375)	PER2 (ENSSBOG00000033356)
Marmoset	MODERN SPECIES	18	BOK (ENSCJAG00000000544) #36	STK25 (ENSCJAG00000006066) #35	FARP2 (ENSCJAG00000006087) #34	ENSCJAG00000006122 #33	HDLBP (ENSCJAG00000006152) #32	ANO7 (ENSCJAG00000064163) #31	PPP1R7 (ENSCJAG00000006275) #30	PASK (ENSCJAG00000073377) #29	MTERF4 (ENSCJAG00000006346) #28	SNED1 (ENSCJAG00000006352) #27	CROCC2 (ENSCJAG00000075544) #26	MAB21L4 (ENSCJAG00000006386) #25	AGXT (ENSCJAG00000006403) #24	ENSCJAG00000087306	KIF1A (ENSCJAG00000006425) #23	ENSCJAG00000083345 #22	GPR35 (ENSCJAG00000022936) #20	CAPN10 (ENSCJAG00000006565) #19	RNPEPL1 (ENSCJAG00000006582) #18	DUSP28 (ENSCJAG00000006583) #17	ANKMY1 (ENSCJAG00000054585) #16	GPC1 (ENSCJAG00000019058) #15	OTOS (ENSCJAG00000019076) #14	COPS9 (ENSCJAG00000061577) #13	ENSCJAG00000022267 #12	NDUFA10 (ENSCJAG00000019091) #10	HDAC4 (ENSCJAG00000009423) #9	TWIST2 (ENSCJAG00000023006) #8	ASB1 (ENSCJAG00000000414) #7	ENSCJAG00000072137	TRAF3IP1 (ENSCJAG00000000419)
Mas night monkey	MODERN SPECIES	971		STK25 (ENSANAG00000035720) #35	FARP2 (ENSANAG00000034380) #34	ENSANAG00000027256	SEPTIN2 (ENSANAG00000023789) #33	HDLBP (ENSANAG00000020545) #32	ANO7 (ENSANAG00000020358) #31	PPP1R7 (ENSANAG00000033142) #30	PASK (ENSANAG00000024785) #29	MTERF4 (ENSANAG00000026147) #28	SNED1 (ENSANAG00000031412) #27	CROCC2 (ENSANAG00000021788) #26	MAB21L4 (ENSANAG00000024760) #25	AGXT (ENSANAG00000032149) #24	KIF1A (ENSANAG00000024946) #23	ENSANAG00000028502 #22	GPR35 (ENSANAG00000031970) #20	CAPN10 (ENSANAG00000022730) #19	RNPEPL1 (ENSANAG00000019926) #18	DUSP28 (ENSANAG00000018201) #17	ENSANAG00000022451 #16	GPC1 (ENSANAG00000034257) #15	OTOS (ENSANAG00000024628) #14	COPS9 (ENSANAG00000028873) #13	ENSANAG00000032986 #12	NDUFA10 (ENSANAG00000000503) #10	ENSANAG00000022498	ENSANAG00000025509
Tarsier	MODERN SPECIES	3521														AGXT (ENSTSYG00000000390) #24	KIF1A (ENSTSYG00000011394) #23	ENSTSYG00000029201 #22	CAPN10 (ENSTSYG00000008626) #19	RNPEPL1 (ENSTSYG00000012375) #18	DUSP28 (ENSTSYG00000004931) #17	ENSTSYG00000034035 #16
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00940000156342	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT00940000156342	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Lemuriformes_a	ANCESTRAL SPECIES	80	ENSGT00940000156342	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.b #30	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Coquerels sifaka	MODERN SPECIES	894												ENSPCOG00000017285 #16	DUSP28 (ENSPCOG00000025402) #17	RNPEPL1 (ENSPCOG00000014304) #18	CAPN10 (ENSPCOG00000017565) #19	ENSPCOG00000018454 #22	KIF1A (ENSPCOG00000016994) #23	AGXT (ENSPCOG00000009042) #24	MAB21L4 (ENSPCOG00000017404) #25	CROCC2 (ENSPCOG00000021643) #26	SNED1 (ENSPCOG00000015668) #27	MTERF4 (ENSPCOG00000014892) #28	ENSPCOG00000018169 #29	ENSPCOG00000001306	ENSPCOG00000020645
Mouse lemur	MODERN SPECIES	30	TRAF3IP1 (ENSMICG00000004727)	ASB1 (ENSMICG00000004736) #7	ENSMICG00000043732	TWIST2 (ENSMICG00000034572) #8	HDAC4 (ENSMICG00000000164) #9	NDUFA10 (ENSMICG00000028653) #10	ENSMICG00000045168 #12	ENSMICG00000033890 #12	COPS9 (ENSMICG00000043528) #13	OTOS (ENSMICG00000035278) #14	GPC1 (ENSMICG00000037890) #15	ANKMY1 (ENSMICG00000047966) #16	DUSP28 (ENSMICG00000028755) #17	RNPEPL1 (ENSMICG00000028767) #18	CAPN10 (ENSMICG00000013040) #19	ENSMICG00000030448 #22	KIF1A (ENSMICG00000034158) #23	AGXT (ENSMICG00000036652) #24	MAB21L4 (ENSMICG00000009170) #25	SNED1 (ENSMICG00000012979) #27	MTERF4 (ENSMICG00000044756) #28	PASK (ENSMICG00000013010) #29	ENSMICG00000017782	HDLBP (ENSMICG00000004569) #32	SEPTIN2 (ENSMICG00000000909) #33	FARP2 (ENSMICG00000012071) #34	STK25 (ENSMICG00000012111) #35	BOK (ENSMICG00000029950) #36	THAP4 (ENSMICG00000016452) #37	ATG4B (ENSMICG00000013114)	ENSMICG00000042660
Bushbaby	MODERN SPECIES	248	ASB1 (ENSOGAG00000008075) #7	TWIST2 (ENSOGAG00000029007) #8	HDAC4 (ENSOGAG00000004929) #9	NDUFA10 (ENSOGAG00000005023) #10	ENSOGAG00000034791	COPS9 (ENSOGAG00000025113) #13	OTOS (ENSOGAG00000027090) #14	ENSOGAG00000032614	GPC1 (ENSOGAG00000001678) #15	ANKMY1 (ENSOGAG00000016152) #16	ENSOGAG00000027421	DUSP28 (ENSOGAG00000031083) #17	RNPEPL1 (ENSOGAG00000005146) #18	ENSOGAG00000024283	CAPN10 (ENSOGAG00000015717) #19	ENSOGAG00000014372 #22	KIF1A (ENSOGAG00000015550) #23	AGXT (ENSOGAG00000010081) #24	MAB21L4 (ENSOGAG00000006915) #25	CROCC2 (ENSOGAG00000024629) #26	SNED1 (ENSOGAG00000000732) #27	MTERF4 (ENSOGAG00000024565) #28	PASK (ENSOGAG00000000734) #29	ENSOGAG00000000735	HDLBP (ENSOGAG00000000738) #32	SEPTIN2 (ENSOGAG00000004457) #33	ENSOGAG00000008540 #34	ENSOGAG00000034190	STK25 (ENSOGAG00000008543) #35	BOK (ENSOGAG00000026580) #36	THAP4 (ENSOGAG00000024821) #37
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Glires	ANCESTRAL SPECIES	14	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Rodentia	ANCESTRAL SPECIES	14	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT01090000260024.A.a.a.b.b.b.a.a.b	ENSGT01090000260024.A.a.a.b.b.b.a.a.a.a.a	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Muroidea	ANCESTRAL SPECIES	20	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Cricetidae	ANCESTRAL SPECIES	19	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400.b #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400.b #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Golden Hamster	MODERN SPECIES	686										Gpc1 (ENSMAUG00000016065) #15	Ankmy1 (ENSMAUG00000019495) #16	Dusp28 (ENSMAUG00000016571) #17	ENSMAUG00000009570 #18	Capn10 (ENSMAUG00000014973) #19	Gpr35 (ENSMAUG00000015555) #20	Aqp12 (ENSMAUG00000013737) #22	Kif1a (ENSMAUG00000010053) #23	Agxt (ENSMAUG00000009685) #24	Mab21l4 (ENSMAUG00000001120) #25	Crocc2 (ENSMAUG00000019614) #26	Sned1 (ENSMAUG00000017367) #27	Mterf4 (ENSMAUG00000000081) #28	Pask (ENSMAUG00000018648) #29	ENSMAUG00000013558 #30	Ano7 (ENSMAUG00000013132) #31	Hdlbp (ENSMAUG00000017743) #32	ENSMAUG00000011950 #33	Farp2 (ENSMAUG00000013770) #34	Stk25 (ENSMAUG00000009418) #35	Bok (ENSMAUG00000011149) #36	ENSMAUG00000009008 #37
Chinese hamster chok1gshd	MODERN SPECIES	1	Or6b3 (ENSCGRG00001009820) ##12	Or9s23 (ENSCGRG00001010591)	ENSCGRG00001024695	Or9s27 (ENSCGRG00001010630)	ENSCGRG00001009865	Or9s14 (ENSCGRG00001024692)	ENSCGRG00001010578	ENSCGRG00001004954 #13	Otos (ENSCGRG00001024726) #14	Gpc1 (ENSCGRG00001010716) #15	Ankmy1 (ENSCGRG00001010749) #16	Dusp28 (ENSCGRG00001001800) #17	Rnpepl1 (ENSCGRG00001024714) #18	Capn10 (ENSCGRG00001024705) #19	Gpr35 (ENSCGRG00001010428) #20	Aqp12 (ENSCGRG00001010769) #22	Kif1a (ENSCGRG00001009776) #23	Agxt (ENSCGRG00001004811) #24	Mab21l4 (ENSCGRG00001002563) #25	Crocc2 (ENSCGRG00001010820) #26	Sned1 (ENSCGRG00001002826) #27	Mterf4 (ENSCGRG00001006818) #28	Pask (ENSCGRG00001024785) #29	ENSCGRG00001001852 #30	Ano7 (ENSCGRG00001006513) #31	Hdlbp (ENSCGRG00001006086) #32	ENSCGRG00001009996 #33	Farp2 (ENSCGRG00001003923) #34	Stk25 (ENSCGRG00001005671) #35	Bok (ENSCGRG00001024808) #36	Thap4 (ENSCGRG00001002632) #37
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400.b #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Prairie vole	MODERN SPECIES	354	Spag16 (ENSMOCG00000017743)	Vwc2l (ENSMOCG00000007279)	Bard1 (ENSMOCG00000017289)	Abca12 (ENSMOCG00000014923)	ENSMOCG00000003338	Atic (ENSMOCG00000015771)	Fn1 (ENSMOCG00000022262)	ENSMOCG00000020221	ENSMOCG00000010518 #13	Otos (ENSMOCG00000009370) #14	Gpc1 (ENSMOCG00000000952) #15	Ankmy1 (ENSMOCG00000001016) #16	Dusp28 (ENSMOCG00000020145) #17	Rnpepl1 (ENSMOCG00000001687) #18	Capn10 (ENSMOCG00000016869) #19	Aqp12 (ENSMOCG00000005420) #22	Kif1a (ENSMOCG00000003062) #23	Agxt (ENSMOCG00000002293) #24	Mab21l4 (ENSMOCG00000001573) #25	Crocc2 (ENSMOCG00000017827) #26	Sned1 (ENSMOCG00000002594) #27	Mterf4 (ENSMOCG00000010203) #28	Pask (ENSMOCG00000016982) #29	ENSMOCG00000012798	Ano7 (ENSMOCG00000000907) #31	Hdlbp (ENSMOCG00000006679) #32	ENSMOCG00000014906 #33	Farp2 (ENSMOCG00000021782) #34	Stk25 (ENSMOCG00000017547) #35	Bok (ENSMOCG00000016270) #36	ENSMOCG00000014492 #37
Northern American deer mouse	MODERN SPECIES	4	ENSPEMG00000000810 #10	Or9s23 (ENSPEMG00000024929)	Or9s27 (ENSPEMG00000025002)	ENSPEMG00000029408	ENSPEMG00000030762	Or9s14 (ENSPEMG00000028583)	ENSPEMG00000024906	ENSPEMG00000031336 #13	Otos (ENSPEMG00000017821) #14	Gpc1 (ENSPEMG00000015202) #15	Ankmy1 (ENSPEMG00000007716) #16	Dusp28 (ENSPEMG00000027177) #17	Rnpepl1 (ENSPEMG00000011698) #18	Capn10 (ENSPEMG00000010924) #19	Gpr35 (ENSPEMG00000024361) #20	Aqp12 (ENSPEMG00000013245) #22	Kif1a (ENSPEMG00000002901) #23	Agxt (ENSPEMG00000013891) #24	Mab21l4 (ENSPEMG00000001533) #25	Crocc2 (ENSPEMG00000014619) #26	Sned1 (ENSPEMG00000008505) #27	Mterf4 (ENSPEMG00000026952) #28	Pask (ENSPEMG00000022938) #29	Ppp1r7 (ENSPEMG00000001859)	Ano7 (ENSPEMG00000011761) #31	Hdlbp (ENSPEMG00000017704) #32	ENSPEMG00000022937 #33	Farp2 (ENSPEMG00000023787) #34	Stk25 (ENSPEMG00000023590) #35	Bok (ENSPEMG00000023399) #36	Thap4 (ENSPEMG00000022638) #37
Murinae	ANCESTRAL SPECIES	9	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT01100000263494.a.a.a.a.b.a.m.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Mus	ANCESTRAL SPECIES	5	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT01100000263494.a.a.a.a.b.a.m.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Mus_A	ANCESTRAL SPECIES	5	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT01100000263494.a.a.a.a.b.a.m.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT01100000263494.a.a.a.a.b.a.m.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Mouse	MODERN SPECIES		Or6b2b (ENSMUSG00000057464) ##12	Or6b3 (ENSMUSG00000042849) ##12	Or9s23 (ENSMUSG00000058904)	Or9s27 (ENSMUSG00000046300)	Or9s15 (ENSMUSG00000062497)	Or9s14 (ENSMUSG00000063583)	Or9s13 (ENSMUSG00000061616)	Cops9 (ENSMUSG00000073616)	Otos (ENSMUSG00000044055) #14	Gpc1 (ENSMUSG00000034220) #15	Ankmy1 (ENSMUSG00000034212) #16	Dusp28 (ENSMUSG00000047067) #17	Rnpepl1 (ENSMUSG00000026269) #18	Capn10 (ENSMUSG00000026270) #19	Gpr35 (ENSMUSG00000026271) #20	Aqp12 (ENSMUSG00000045091) #22	Kif1a (ENSMUSG00000014602) #23	Agxt (ENSMUSG00000026272) #24	Mab21l4 (ENSMUSG00000034159) #25	Crocc2 (ENSMUSG00000084989) #26	Sned1 (ENSMUSG00000047793) #27	Mterf4 (ENSMUSG00000026273) #28	Pask (ENSMUSG00000026274) #29	Ppp1r7 (ENSMUSG00000026275)	Ano7 (ENSMUSG00000034107) #31	Hdlbp (ENSMUSG00000034088) #32	Septin2 (ENSMUSG00000026276) #33	Septin2 (ENSMUSG00000116048) #33	Farp2 (ENSMUSG00000034066) #34	Stk25 (ENSMUSG00000026277) #35	Bok (ENSMUSG00000026278) #36
Mus_C	ANCESTRAL SPECIES	1	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.a.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.b.b	ENSGT01100000263494.a.a.a.a.b.a.m.a.b	ENSGT01100000263494.a.a.a.a.b.a.m.b.a	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00940000158551.k.a #31	ENSGT00900000141059.z #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
spretus	MODERN SPECIES		MGP_SPRETEiJ_G0015235 ##12	Or6b3 (MGP_SPRETEiJ_G0015236) ##12	Or9s23 (MGP_SPRETEiJ_G0015237)	Or9s27 (MGP_SPRETEiJ_G0015238)	Or9s15 (MGP_SPRETEiJ_G0015239)	Or9s14 (MGP_SPRETEiJ_G0015240)	Or9s13 (MGP_SPRETEiJ_G0015241)	Cops9 (MGP_SPRETEiJ_G0015242)	Otos (MGP_SPRETEiJ_G0015243) #14	Gpc1 (MGP_SPRETEiJ_G0015244) #15	Ankmy1 (MGP_SPRETEiJ_G0015245) #16	Dusp28 (MGP_SPRETEiJ_G0015246) #17	Rnpepl1 (MGP_SPRETEiJ_G0015247) #18	Capn10 (MGP_SPRETEiJ_G0015248) #19	Gpr35 (MGP_SPRETEiJ_G0015249) #20	Aqp12 (MGP_SPRETEiJ_G0015250) #22	Kif1a (MGP_SPRETEiJ_G0015251) #23	Agxt (MGP_SPRETEiJ_G0015252) #24	Mab21l4 (MGP_SPRETEiJ_G0015253) #25	Crocc2 (MGP_SPRETEiJ_G0015254) #26	Sned1 (MGP_SPRETEiJ_G0015255) #27	Mterf4 (MGP_SPRETEiJ_G0015256) #28	Pask (MGP_SPRETEiJ_G0015257) #29	Ppp1r7 (MGP_SPRETEiJ_G0015258)	Ano7 (MGP_SPRETEiJ_G0015259) #31	Hdlbp (MGP_SPRETEiJ_G0015260) #32	MGP_SPRETEiJ_G0015261 #33	Farp2 (MGP_SPRETEiJ_G0015262) #34	Stk25 (MGP_SPRETEiJ_G0015263) #35	Bok (MGP_SPRETEiJ_G0015264) #36	Thap4 (MGP_SPRETEiJ_G0015265) #37
Steppe mouse	MODERN SPECIES	2937	Or6b3 (ENSMSIG00000014010) ##12	Or9s23 (ENSMSIG00000014021)	Or9s27 (ENSMSIG00000014026)	Or9s15 (ENSMSIG00000014031)	Or9s14 (ENSMSIG00000014036)	Or9s13 (ENSMSIG00000014042)	ENSMSIG00000014046 #13	Otos (ENSMSIG00000014058) #14	Gpc1 (ENSMSIG00000014065) #15	Ankmy1 (ENSMSIG00000014085) #16	Dusp28 (ENSMSIG00000014219) #17	Rnpepl1 (ENSMSIG00000014227) #18	ENSMSIG00000014261	Capn10 (ENSMSIG00000014267) #19	Gpr35 (ENSMSIG00000014380) #20	Aqp12 (ENSMSIG00000014387) #22	Kif1a (ENSMSIG00000014413) #23	ENSMSIG00000016103	Agxt (ENSMSIG00000016129) #24	Mab21l4 (ENSMSIG00000016176) #25	Crocc2 (ENSMSIG00000016212) #26	Sned1 (ENSMSIG00000016292) #27	Mterf4 (ENSMSIG00000016399) #28	Pask (ENSMSIG00000016422) #29	ENSMSIG00000016450 #30	Ano7 (ENSMSIG00000016501) #31	Hdlbp (ENSMSIG00000016627) #32	ENSMSIG00000016766 #33	ENSMSIG00000016781 #34
Ryukyu mouse	MODERN SPECIES		MGP_CAROLIEiJ_G0014431 ##12	Or6b3 (MGP_CAROLIEiJ_G0014432) ##12	Or9s23 (MGP_CAROLIEiJ_G0014433)	Or9s27 (MGP_CAROLIEiJ_G0014434)	Or9s15 (MGP_CAROLIEiJ_G0014435)	Or9s14 (MGP_CAROLIEiJ_G0014436)	Or9s13 (MGP_CAROLIEiJ_G0014437)	Cops9 (MGP_CAROLIEiJ_G0014438)	Otos (MGP_CAROLIEiJ_G0014439) #14	Gpc1 (MGP_CAROLIEiJ_G0014440) #15	Ankmy1 (MGP_CAROLIEiJ_G0014441) #16	Dusp28 (MGP_CAROLIEiJ_G0014442) #17	Rnpepl1 (MGP_CAROLIEiJ_G0014443) #18	Capn10 (MGP_CAROLIEiJ_G0014444) #19	Gpr35 (MGP_CAROLIEiJ_G0014445) #20	Aqp12 (MGP_CAROLIEiJ_G0014446) #22	Kif1a (MGP_CAROLIEiJ_G0014447) #23	Agxt (MGP_CAROLIEiJ_G0014448) #24	Mab21l4 (MGP_CAROLIEiJ_G0014449) #25	Crocc2 (MGP_CAROLIEiJ_G0014450) #26	Sned1 (MGP_CAROLIEiJ_G0014451) #27	Mterf4 (MGP_CAROLIEiJ_G0014452) #28	Pask (MGP_CAROLIEiJ_G0014453) #29	Ppp1r7 (MGP_CAROLIEiJ_G0014454)	Ano7 (MGP_CAROLIEiJ_G0014455) #31	Hdlbp (MGP_CAROLIEiJ_G0014456) #32	MGP_CAROLIEiJ_G0014457 #33	Farp2 (MGP_CAROLIEiJ_G0014458) #34	Stk25 (MGP_CAROLIEiJ_G0014459) #35	Bok (MGP_CAROLIEiJ_G0014460) #36	Thap4 (MGP_CAROLIEiJ_G0014461) #37
Shrew mouse	MODERN SPECIES	18	MGP_PahariEiJ_G0027667 ##12	Or6b3 (MGP_PahariEiJ_G0027668) ##12	Or9s23 (MGP_PahariEiJ_G0027669)	Or9s27 (MGP_PahariEiJ_G0027670)	Or9s15 (MGP_PahariEiJ_G0027671)	Or9s14 (MGP_PahariEiJ_G0027672)	Or9s13 (MGP_PahariEiJ_G0027673)	Cops9 (MGP_PahariEiJ_G0027674)	Otos (MGP_PahariEiJ_G0027675) #14	Gpc1 (MGP_PahariEiJ_G0027676) #15	Ankmy1 (MGP_PahariEiJ_G0027677) #16	Dusp28 (MGP_PahariEiJ_G0027678) #17	Rnpepl1 (MGP_PahariEiJ_G0027679) #18	Capn10 (MGP_PahariEiJ_G0027680) #19	Gpr35 (MGP_PahariEiJ_G0027681) #20	Aqp12 (MGP_PahariEiJ_G0027682) #22	Kif1a (MGP_PahariEiJ_G0027683) #23	Agxt (MGP_PahariEiJ_G0027684) #24	Mab21l4 (MGP_PahariEiJ_G0027685) #25	Crocc2 (MGP_PahariEiJ_G0027686) #26	Sned1 (MGP_PahariEiJ_G0027687) #27	Mterf4 (MGP_PahariEiJ_G0027688) #28	Pask (MGP_PahariEiJ_G0027689) #29	Ppp1r7 (MGP_PahariEiJ_G0027690)	Ano7 (MGP_PahariEiJ_G0027691) #31	Hdlbp (MGP_PahariEiJ_G0027692) #32	MGP_PahariEiJ_G0027693 #33	Farp2 (MGP_PahariEiJ_G0027694) #34	Stk25 (MGP_PahariEiJ_G0027695) #35	Bok (MGP_PahariEiJ_G0027696) #36	Thap4 (MGP_PahariEiJ_G0027697) #37
Rat	MODERN SPECIES	19	Or6b3 (ENSRNOG00000064010) ##12	Or9s23b (ENSRNOG00000070407)	Or9s23 (ENSRNOG00000068571)	Or9s27 (ENSRNOG00000062550)	Or9s15 (ENSRNOG00000066764)	Or9s27 (ENSRNOG00000066727)	Or9s14 (ENSRNOG00000062524)	Or9s13 (ENSRNOG00000070697)	Cops9 (ENSRNOG00000037402)	Otos (ENSRNOG00000016567) #14	Gpc1 (ENSRNOG00000049437) #15	Ankmy1 (ENSRNOG00000048567) #16	Rnpepl1 (ENSRNOG00000045775) #18	Capn10 (ENSRNOG00000045623) #19	Gpr35 (ENSRNOG00000062887) #20	Aqp12a (ENSRNOG00000004452) #22	Kif1a (ENSRNOG00000023993) #23	Agxt (ENSRNOG00000023856) #24	Mab21l4 (ENSRNOG00000023557) #25	Crocc2 (ENSRNOG00000063752) #26	Sned1 (ENSRNOG00000023548) #27	Mterf4 (ENSRNOG00000037376) #28	Pask (ENSRNOG00000016888) #29	LOC102549694 (ENSRNOG00000066227)	AABR07068351.1 (ENSRNOG00000016974) #30	Ano7 (ENSRNOG00000023427) #31	Hdlbp (ENSRNOG00000031479) #32	Septin2 (ENSRNOG00000017952) #33	LOC100362040 (ENSRNOG00000030738)	Farp2 (ENSRNOG00000018051) #34	Stk25 (ENSRNOG00000018181) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	634	ENSNGAG00000017086	Twist2 (ENSNGAG00000021306) #8	Hdac4 (ENSNGAG00000022632) #9	Ndufa10 (ENSNGAG00000021987) #10	ENSNGAG00000014019 ##12	ENSNGAG00000023329 ##12	ENSNGAG00000013816 ##12	ENSNGAG00000014052 ##12	ENSNGAG00000019385 #13	Otos (ENSNGAG00000023827) #14	Gpc1 (ENSNGAG00000023787) #15	ENSNGAG00000023967 #16	Dusp28 (ENSNGAG00000003361) #17	Rnpepl1 (ENSNGAG00000023081) #18	Capn10 (ENSNGAG00000004324) #19	Aqp12 (ENSNGAG00000011624) #22	Kif1a (ENSNGAG00000022256) #23	Agxt (ENSNGAG00000022054) #24	Mab21l4 (ENSNGAG00000012567) #25	Crocc2 (ENSNGAG00000021519) #26	Sned1 (ENSNGAG00000023743) #27	Mterf4 (ENSNGAG00000023724) #28	Pask (ENSNGAG00000007549) #29	ENSNGAG00000017337 #30	Ano7 (ENSNGAG00000022445) #31	Hdlbp (ENSNGAG00000014873) #32	ENSNGAG00000022412 #33	Farp2 (ENSNGAG00000004760) #34	Stk25 (ENSNGAG00000001501) #35	Bok (ENSNGAG00000023762) #36	Thap4 (ENSNGAG00000024010) #37
Lesser Egyptian jerboa	MODERN SPECIES	146	ENSJJAG00000012551	ENSJJAG00000014728	Twist2 (ENSJJAG00000014780) #8	Hdac4 (ENSJJAG00000019569) #9	ENSJJAG00000018931 #10	Or6b3 (ENSJJAG00000014383) ##12	ENSJJAG00000016056	ENSJJAG00000014296	ENSJJAG00000010653 #13	Otos (ENSJJAG00000010257) #14	Gpc1 (ENSJJAG00000020512) #15	Ankmy1 (ENSJJAG00000016606) #16	Dusp28 (ENSJJAG00000010706) #17	Rnpepl1 (ENSJJAG00000010618) #18	Capn10 (ENSJJAG00000001191) #19	Aqp12 (ENSJJAG00000016259) #22	Kif1a (ENSJJAG00000018370) #23	Agxt (ENSJJAG00000012015) #24	Mab21l4 (ENSJJAG00000011171) #25	Crocc2 (ENSJJAG00000005843) #26	Sned1 (ENSJJAG00000012102) #27	Mterf4 (ENSJJAG00000000477) #28	Pask (ENSJJAG00000020114) #29	Ppp1r7 (ENSJJAG00000018768)	Hdlbp (ENSJJAG00000003596) #32	ENSJJAG00000019868 #33	Farp2 (ENSJJAG00000011289) #34	Stk25 (ENSJJAG00000000845) #35	Bok (ENSJJAG00000022455) #36	Thap4 (ENSJJAG00000022829) #37	ENSJJAG00000019840
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.a ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Marmotini	ANCESTRAL SPECIES	2	ENSGT00720000108822	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706.c #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00910000148484	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37
Marmotini_b	ANCESTRAL SPECIES	41	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.a.l ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706.c #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37	ENSGT00530000063000.a.b.b
Squirrel	MODERN SPECIES	345			TWIST2 (ENSSTOG00000004633) #8	HDAC4 (ENSSTOG00000011115) #9	NDUFA10 (ENSSTOG00000028742) #10	ENSSTOG00000016220	ENSSTOG00000002010 ##12	ENSSTOG00000034284	OTOS (ENSSTOG00000022691) #14	ENSSTOG00000021706 #15	ENSSTOG00000020642 #16	DUSP28 (ENSSTOG00000026128) #17	RNPEPL1 (ENSSTOG00000006614) #18	ENSSTOG00000027909 #19	GPR35 (ENSSTOG00000026086) #20	ENSSTOG00000022231 #22	KIF1A (ENSSTOG00000021868) #23	AGXT (ENSSTOG00000008004) #24	MAB21L4 (ENSSTOG00000006007) #25	SNED1 (ENSSTOG00000031779) #27	ENSSTOG00000016306	HDLBP (ENSSTOG00000013331) #32	SEPTIN2 (ENSSTOG00000013357) #33	FARP2 (ENSSTOG00000022815) #34	STK25 (ENSSTOG00000026742) #35	BOK (ENSSTOG00000028135) #36	THAP4 (ENSSTOG00000015998) #37	ATG4B (ENSSTOG00000014734)	ING5 (ENSSTOG00000005977)	D2HGDH (ENSSTOG00000023380)	PDCD1 (ENSSTOG00000022396)
Arctic ground squirrel	MODERN SPECIES	634											ANKMY1 (ENSUPAG00010013563) #16	DUSP28 (ENSUPAG00010013603) #17	RNPEPL1 (ENSUPAG00010013607) #18	CAPN10 (ENSUPAG00010013624) #19	GPR35 (ENSUPAG00010013650) #20	ENSUPAG00010013665 #22	KIF1A (ENSUPAG00010013677) #23	AGXT (ENSUPAG00010014165) #24	MAB21L4 (ENSUPAG00010014167) #25	CROCC2 (ENSUPAG00010014174) #26	SNED1 (ENSUPAG00010014208) #27	MTERF4 (ENSUPAG00010014252) #28	PASK (ENSUPAG00010014276) #29	ENSUPAG00010014539	HDLBP (ENSUPAG00010014553) #32	ENSUPAG00010014710 #33	FARP2 (ENSUPAG00010014740) #34	STK25 (ENSUPAG00010014936) #35
Alpin marmot	MODERN SPECIES	8	ASB1 (ENSMMMG00000005123) #7	TWIST2 (ENSMMMG00000005158) #8	HDAC4 (ENSMMMG00000005171) #9	NDUFA10 (ENSMMMG00000005276) #10	ENSMMMG00000005288	ENSMMMG00000005299	ENSMMMG00000005309	COPS9 (ENSMMMG00000005314) #13	OTOS (ENSMMMG00000005322) #14	GPC1 (ENSMMMG00000005333) #15	ANKMY1 (ENSMMMG00000005391) #16	DUSP28 (ENSMMMG00000005989) #17	RNPEPL1 (ENSMMMG00000005992) #18	CAPN10 (ENSMMMG00000006016) #19	GPR35 (ENSMMMG00000006043) #20	ENSMMMG00000006051 #22	KIF1A (ENSMMMG00000006074) #23	AGXT (ENSMMMG00000007051) #24	MAB21L4 (ENSMMMG00000007065) #25	SNED1 (ENSMMMG00000007168) #27	MTERF4 (ENSMMMG00000007236) #28	ENSMMMG00000007249 #29	ENSMMMG00000007277	ENSMMMG00000007280	HDLBP (ENSMMMG00000007299) #32	SEPTIN2 (ENSMMMG00000007576) #33	ENSMMMG00000007620 #34	ENSMMMG00000007659 #34	STK25 (ENSMMMG00000007681) #35	ENSMMMG00000007706 #35	BOK (ENSMMMG00000007720) #36
Eurasian red squirrel	MODERN SPECIES	12	TWIST2 (ENSSVLG00005007712) #8	HDAC4 (ENSSVLG00005007840) #9	NDUFA10 (ENSSVLG00005008228) #10	ENSSVLG00005008249 ##12	ENSSVLG00005008260 ##12	ENSSVLG00005008275	ENSSVLG00005008313	COPS9 (ENSSVLG00005008352) #13	OTOS (ENSSVLG00005008376) #14	GPC1 (ENSSVLG00005008402) #15	ANKMY1 (ENSSVLG00005008521) #16	DUSP28 (ENSSVLG00005008924) #17	RNPEPL1 (ENSSVLG00005008949) #18	CAPN10 (ENSSVLG00005009012) #19	GPR35 (ENSSVLG00005009100) #20	ENSSVLG00005009123 #22	KIF1A (ENSSVLG00005009282) #23	AGXT (ENSSVLG00005010198) #24	MAB21L4 (ENSSVLG00005010284) #25	CROCC2 (ENSSVLG00005010408) #26	SNED1 (ENSSVLG00005010615) #27	MTERF4 (ENSSVLG00005010874) #28	ENSSVLG00005010962 #29	ENSSVLG00005011084	ENSSVLG00005011132	HDLBP (ENSSVLG00005011227) #32	ENSSVLG00005011546 #33	FARP2 (ENSSVLG00005011791) #34	STK25 (ENSSVLG00005011880) #35	BOK (ENSSVLG00005012052) #36	THAP4 (ENSSVLG00005012097) #37
Hystricomorpha	ANCESTRAL SPECIES	28	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.i.b	ENSGT01100000263494.a.a.a.a.b.a.m.i.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.j	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37	ENSGT00900000143170
Hystricomorpha_a	ANCESTRAL SPECIES	32	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.m.i.b	ENSGT01100000263494.a.a.a.a.b.a.m.i.a	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.j	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098 #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37	ENSGT00900000143170
Hystricomorpha_b	ANCESTRAL SPECIES	28	ENSGT00940000153969.b #7	ENSGT00940000161996 #8	ENSGT00940000157440 #9	ENSGT00390000016151 #10	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01100000263494.a.a.a.a.b.a.n	ENSGT01100000263494.a.a.a.a.b.a.m.j	ENSGT00390000000076 #13	ENSGT00390000011600 #14	ENSGT01050000244897.a.a.b #15	ENSGT00460000041630 #16	ENSGT00940000161528 #17	ENSGT00940000160400 #18	ENSGT00940000159706 #19	ENSGT01040000240444.A.b.a.b #20	ENSGT00530000063816.d #22	ENSGT00940000156474 #23	ENSGT00940000153241.B #24	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000162689 #26	ENSGT00940000160730 #27	ENSGT00460000041648 #28	ENSGT00940000159035 #29	ENSGT00940000162473	ENSGT00900000141059 #32	ENSGT00940000155098.r #33	ENSGT00940000158642 #34	ENSGT00940000153476.a #35	ENSGT01090000260100.B #36	ENSGT00940000158447 #37	ENSGT00900000143170
Long-tailed chinchilla	MODERN SPECIES	249	HDAC4 (ENSCLAG00000003187) #9	NDUFA10 (ENSCLAG00000002249) #10	ENSCLAG00000002137 ##12	ENSCLAG00000001983	ENSCLAG00000017490	ENSCLAG00000001936	ENSCLAG00000001920	COPS9 (ENSCLAG00000001813) #13	OTOS (ENSCLAG00000001765) #14	GPC1 (ENSCLAG00000002259) #15	ANKMY1 (ENSCLAG00000002009) #16	DUSP28 (ENSCLAG00000001935) #17	RNPEPL1 (ENSCLAG00000001861) #18	CAPN10 (ENSCLAG00000001835) #19	GPR35 (ENSCLAG00000001799) #20	ENSCLAG00000004274 #22	KIF1A (ENSCLAG00000003068) #23	AGXT (ENSCLAG00000002870) #24	MAB21L4 (ENSCLAG00000002824) #25	CROCC2 (ENSCLAG00000002724) #26	SNED1 (ENSCLAG00000002607) #27	MTERF4 (ENSCLAG00000002565) #28	PASK (ENSCLAG00000002519) #29	ENSCLAG00000002485	HDLBP (ENSCLAG00000002365) #32	ENSCLAG00000002255 #33	FARP2 (ENSCLAG00000002135) #34	STK25 (ENSCLAG00000002040) #35	BOK (ENSCLAG00000002024) #36	ENSCLAG00000002013	THAP4 (ENSCLAG00000002361) #37
Degu	MODERN SPECIES	130	TRAF3IP1 (ENSODEG00000009879)	ASB1 (ENSODEG00000009233) #7	TWIST2 (ENSODEG00000019629) #8	ENSODEG00000009580	ENSODEG00000009986 #10	ENSODEG00000019773 ##12	ENSODEG00000008649	OTOS (ENSODEG00000009723) #14	ENSODEG00000019717	ENSODEG00000019706	GPC1 (ENSODEG00000010463) #15	ANKMY1 (ENSODEG00000012472) #16	DUSP28 (ENSODEG00000008939) #17	RNPEPL1 (ENSODEG00000009147) #18	CAPN10 (ENSODEG00000008893) #19	ENSODEG00000013071 #22	KIF1A (ENSODEG00000009831) #23	ENSODEG00000010118	AGXT (ENSODEG00000010326) #24	MAB21L4 (ENSODEG00000009520) #25	CROCC2 (ENSODEG00000013957) #26	SNED1 (ENSODEG00000009052) #27	MTERF4 (ENSODEG00000010009) #28	PASK (ENSODEG00000011073) #29	ENSODEG00000011577	ENSODEG00000012313 #32	ENSODEG00000010316 #33	ENSODEG00000019687	FARP2 (ENSODEG00000010817) #34	STK25 (ENSODEG00000010648) #35	BOK (ENSODEG00000011482) #36
Guinea pig	MODERN SPECIES	13	HDAC4 (ENSCPOG00000013072) #9	NDUFA10 (ENSCPOG00000010123) #10	ENSCPOG00000032551 ##12	ENSCPOG00000038331	ENSCPOG00000033521	ENSCPOG00000032686	ENSCPOG00000033828	COPS9 (ENSCPOG00000038915) #13	OTOS (ENSCPOG00000038739) #14	GPC1 (ENSCPOG00000000572) #15	ANKMY1 (ENSCPOG00000007794) #16	DUSP28 (ENSCPOG00000022626) #17	RNPEPL1 (ENSCPOG00000015474) #18	CAPN10 (ENSCPOG00000012504) #19	GPR35 (ENSCPOG00000032800) #20	ENSCPOG00000006590 #22	KIF1A (ENSCPOG00000010400) #23	AGXT (ENSCPOG00000008216) #24	MAB21L4 (ENSCPOG00000026460) #25	CROCC2 (ENSCPOG00000025037) #26	SNED1 (ENSCPOG00000006265) #27	MTERF4 (ENSCPOG00000025700) #28	PASK (ENSCPOG00000006277) #29	PPP1R7 (ENSCPOG00000006285) #30	HDLBP (ENSCPOG00000006297) #32	ENSCPOG00000013687 #33	ENSCPOG00000038694	FARP2 (ENSCPOG00000013335) #34	STK25 (ENSCPOG00000022798) #35	ENSCPOG00000025899	BOK (ENSCPOG00000030494) #36
Naked mole-rat female	MODERN SPECIES	17	ENSHGLG00000050528	ENSHGLG00000019452	ENSHGLG00000032795	ENSHGLG00000044910	ENSHGLG00000035810	ENSHGLG00000044056	ENSHGLG00000050265	MYEOV2 (ENSHGLG00000039521) #13	ENSHGLG00000018402 #14	GPC1 (ENSHGLG00000016089) #15	ANKMY1 (ENSHGLG00000014751) #16	DUSP28 (ENSHGLG00000014963) #17	RNPEPL1 (ENSHGLG00000002684) #18	CAPN10 (ENSHGLG00000002728) #19	ENSHGLG00000002761 #20	ENSHGLG00000044321 #22	ENSHGLG00000036560 #23
Lagomorpha	ANCESTRAL SPECIES	625																ENSGT00530000063816.d #22	ENSGT00940000156474 #23
Pika	MODERN SPECIES	4064																ENSOPRG00000004845 #22	ENSOPRG00000004859 #23
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Carnivora	ANCESTRAL SPECIES	17	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Caniformia	ANCESTRAL SPECIES	14	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059.b #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Ursus	ANCESTRAL SPECIES	12	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059.b #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b.f ##12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b.e ##12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7
American black bear	MODERN SPECIES	642							ENSUAMG00000019045 #31	ENSUAMG00000019044	ENSUAMG00000019041 #29	MTERF4 (ENSUAMG00000019040) #28	ENSUAMG00000019039 #27	CROCC2 (ENSUAMG00000019034) #26	MAB21L4 (ENSUAMG00000019033) #25	AGXT (ENSUAMG00000019032) #24	KIF1A (ENSUAMG00000016046) #23	ENSUAMG00000015935 #22	ENSUAMG00000015928 #20
Polar bear	MODERN SPECIES	169	ENSUMAG00000010497 #36	STK25 (ENSUMAG00000010503) #35	FARP2 (ENSUMAG00000010519) #34	SEPTIN2 (ENSUMAG00000010525) #33	HDLBP (ENSUMAG00000010539) #32	ANO7 (ENSUMAG00000010556) #31	ENSUMAG00000010567	PASK (ENSUMAG00000010599) #29	MTERF4 (ENSUMAG00000010771) #28	ENSUMAG00000010780 #27	CROCC2 (ENSUMAG00000010789) #26	AGXT (ENSUMAG00000010802) #24	ENSUMAG00000010813 #23	ENSUMAG00000010821 #23	ENSUMAG00000010827 #23	ENSUMAG00000010830 #22	ENSUMAG00000010840 #20	CAPN10 (ENSUMAG00000010851) #19	ENSUMAG00000010860 #16	GPC1 (ENSUMAG00000010882) #15	OTOS (ENSUMAG00000010922) #14	ENSUMAG00000010923	ENSUMAG00000010924	ENSUMAG00000010925 ##12	ENSUMAG00000010926 ##12	NDUFA10 (ENSUMAG00000010938) #10	HDAC4 (ENSUMAG00000011143) #9	ASB1 (ENSUMAG00000011505) #7	TRAF3IP1 (ENSUMAG00000011513)	PER2 (ENSUMAG00000011574)	ILKAP (ENSUMAG00000011877)
Giant Panda	MODERN SPECIES	11	ENSAMEG00000016421	ATG4B (ENSAMEG00000016425)	STK25 (ENSAMEG00000016473) #35	FARP2 (ENSAMEG00000016513) #34	ENSAMEG00000023910 #33	ENSAMEG00000028718 #36	HDLBP (ENSAMEG00000016552) #32	ANO7 (ENSAMEG00000016590) #31	PASK (ENSAMEG00000016638) #29	MTERF4 (ENSAMEG00000016670) #28	SNED1 (ENSAMEG00000016675) #27	CROCC2 (ENSAMEG00000016680) #26	MAB21L4 (ENSAMEG00000016697) #25	AGXT (ENSAMEG00000016700) #24	KIF1A (ENSAMEG00000016731) #23	ENSAMEG00000016813 #22	ENSAMEG00000031353 #20	GPR35 (ENSAMEG00000016815) #20	CAPN10 (ENSAMEG00000016817) #19	RNPEPL1 (ENSAMEG00000016842) #18	DUSP28 (ENSAMEG00000029651) #17	ANKMY1 (ENSAMEG00000016873) #16	GPC1 (ENSAMEG00000011201) #15	OTOS (ENSAMEG00000011215) #14	ENSAMEG00000030947 #13	ENSAMEG00000020162	ENSAMEG00000030179 ##12	NDUFA10 (ENSAMEG00000011222) #10	HDAC4 (ENSAMEG00000011278) #9	TWIST2 (ENSAMEG00000020165) #8	ASB1 (ENSAMEG00000024283) #7
Mustelinae	ANCESTRAL SPECIES	21	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.a.b ##12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
American mink	MODERN SPECIES	275	ENSNVIG00000018353 #37	BOK (ENSNVIG00000018340) #36	STK25 (ENSNVIG00000018289) #35	FARP2 (ENSNVIG00000018158) #34	SEPTIN2 (ENSNVIG00000018096) #33	HDLBP (ENSNVIG00000018029) #32	ANO7 (ENSNVIG00000017977) #31	ENSNVIG00000017870	PASK (ENSNVIG00000017829) #29	MTERF4 (ENSNVIG00000017805) #28	ENSNVIG00000017789 #27	CROCC2 (ENSNVIG00000017692) #26	MAB21L4 (ENSNVIG00000017663) #25	AGXT (ENSNVIG00000017620) #24	KIF1A (ENSNVIG00000015841) #23	ENSNVIG00000015738 #22	GPR35 (ENSNVIG00000015733) #20	CAPN10 (ENSNVIG00000015662) #19	RNPL1 (ENSNVIG00000015626) #18	DUSP28 (ENSNVIG00000015613) #17	ENSNVIG00000015604 #16	ENSNVIG00000015597	GPC1 (ENSNVIG00000015575) #15	OTOS (ENSNVIG00000015569) #14	COPS9 (ENSNVIG00000015564) #13
Ferret	MODERN SPECIES	173	BOK (ENSMPUG00000000179) #36	ENSMPUG00000000178	STK25 (ENSMPUG00000000176) #35	FARP2 (ENSMPUG00000000175) #34	SEPTIN2 (ENSMPUG00000000166) #33	HDLBP (ENSMPUG00000000163) #32	ANO7 (ENSMPUG00000000160) #31	PASK (ENSMPUG00000000158) #29	MTERF4 (ENSMPUG00000000155) #28	ENSMPUG00000000152	SNED1 (ENSMPUG00000000147) #27	CROCC2 (ENSMPUG00000000145) #26	MAB21L4 (ENSMPUG00000000144) #25	AGXT (ENSMPUG00000000143) #24	KIF1A (ENSMPUG00000000142) #23	ENSMPUG00000000141 #22	GPR35 (ENSMPUG00000019432) #20	CAPN10 (ENSMPUG00000000139) #19	RNPEPL1 (ENSMPUG00000000138) #18	DUSP28 (ENSMPUG00000000137) #17	ENSMPUG00000000135	ANKMY1 (ENSMPUG00000000132) #16	GPC1 (ENSMPUG00000000131) #15	ENSMPUG00000000130	OTOS (ENSMPUG00000000129) #14	ENSMPUG00000019431	ENSMPUG00000019430 ##12	NDUFA10 (ENSMPUG00000000128) #10	HDAC4 (ENSMPUG00000000127) #9	TWIST2 (ENSMPUG00000019429) #8	ASB1 (ENSMPUG00000000126) #7
Canidae	ANCESTRAL SPECIES	20	ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098.ib.b #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076.j #13	ENSGT01100000263494.a.a.a.a.b.a.k.a.b.b	ENSGT01100000263494.a.a.a.a.b.a.k.a.b.a	ENSGT01100000263494.a.a.a.a.b.a.k.b.a.a.b	ENSGT01100000263494.a.a.a.a.b.a.l.a.a	ENSGT01100000263494.a.a.a.a.b.a.l.b.a	ENSGT01100000263494.a.a.a.a.b.a.l.b.b	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.o #12
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098.ib.b #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00390000000703.h.lb.b	ENSGT00940000160730 #27	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076.j #13	ENSGT01100000263494.a.a.a.a.b.a.k.a.b.b	ENSGT01100000263494.a.a.a.a.b.a.k.a.b.a	ENSGT01100000263494.a.a.a.a.b.a.k.b.a.a.a.a	ENSGT01100000263494.a.a.a.a.b.a.l.a.a	ENSGT01100000263494.a.a.a.a.b.a.l.b.a	ENSGT01100000263494.a.a.a.a.b.a.l.b.b	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.o #12
Dingo	MODERN SPECIES	304	THAP4 (ENSCAFG00020025129) #37	BOK (ENSCAFG00020025122) #36	STK25 (ENSCAFG00020025119) #35	FARP2 (ENSCAFG00020025110) #34	ENSCAFG00020025094 #33	HDLBP (ENSCAFG00020025089) #32	ANO7 (ENSCAFG00020025079) #31	ENSCAFG00020025077	PASK (ENSCAFG00020025046) #29	ENSCAFG00020025033 #28	ENSCAFG00020025030	SNED1 (ENSCAFG00020024966) #27	MAB21L4 (ENSCAFG00020024951) #25	AGXT (ENSCAFG00020024949) #24	KIF1A (ENSCAFG00020024781) #23	ENSCAFG00020024725 #22	GPR35 (ENSCAFG00020024721) #20	CAPN10 (ENSCAFG00020024718) #19	RNPEPL1 (ENSCAFG00020024716) #18	DUSP28 (ENSCAFG00020024714) #17	ANKMY1 (ENSCAFG00020024711) #16	GPC1 (ENSCAFG00020024705) #15	ENSCAFG00020024704 #14	ENSCAFG00020024702 #13	ENSCAFG00020024697	ENSCAFG00020024694	ENSCAFG00020024693	ENSCAFG00020024692	ENSCAFG00020024691	ENSCAFG00020024690	ENSCAFG00020024689
Dog	MODERN SPECIES	17	THAP4 (ENSCAFG00845023699) #37	ENSCAFG00845023631 #36	STK25 (ENSCAFG00845023492) #35	FARP2 (ENSCAFG00845023180) #34	SEPTIN2 (ENSCAFG00845023027) #33	HDLBP (ENSCAFG00845022763) #32	ANO7 (ENSCAFG00845022518) #31	PPP1R7 (ENSCAFG00845022243) #30	PASK (ENSCAFG00845021974) #29	ENSCAFG00845021901 #28	ENSCAFG00845021865	SNED1 (ENSCAFG00845021016) #27	MAB21L4 (ENSCAFG00845020820) #25	AGXT (ENSCAFG00845020770) #24	KIF1A (ENSCAFG00845030810) #23	AQP12 (ENSCAFG00845030743) #22	GPR35 (ENSCAFG00845030733) #20	CAPN10 (ENSCAFG00845030713) #19	RNPEPL1 (ENSCAFG00845030682) #18	ANKMY1 (ENSCAFG00845030657) #16	GPC1 (ENSCAFG00845030628) #15	ENSCAFG00845030618 #14	ENSCAFG00845030601	ENSCAFG00845030592	ENSCAFG00845030587	OR9S16 (ENSCAFG00845030579)	OR9S5 (ENSCAFG00845030571)	OR9S12 (ENSCAFG00845030564)	OR9S20 (ENSCAFG00845030551)	OR9S11 (ENSCAFG00845030529)	OR9S26 (ENSCAFG00845030519)
Red fox	MODERN SPECIES	253	ATG4B (ENSVVUG00000022778)	THAP4 (ENSVVUG00000022780) #37	ENSVVUG00000022782 #36	STK25 (ENSVVUG00000022783) #35	ENSVVUG00000022785 #34	ENSVVUG00000022790 #34	SEPT2 (ENSVVUG00000022793) #33	HDLBP (ENSVVUG00000022797) #32	PPP1R7 (ENSVVUG00000022804)	PASK (ENSVVUG00000022805) #29	SNED1 (ENSVVUG00000022810) #27	ENSVVUG00000022955	MAB21L4 (ENSVVUG00000022960) #25	AGXT (ENSVVUG00000022967) #24	KIF1A (ENSVVUG00000022993) #23	AQP12B (ENSVVUG00000023548) #22	GPR35 (ENSVVUG00000023550) #20	CAPN10 (ENSVVUG00000023557) #19	RNPEPL1 (ENSVVUG00000023560) #18	ANKMY1 (ENSVVUG00000023563) #16	GPC1 (ENSVVUG00000023568) #15	OTOS (ENSVVUG00000023588) #14	ENSVVUG00000023595	ENSVVUG00000023597	ENSVVUG00000023602	ENSVVUG00000023605	ENSVVUG00000023607	ENSVVUG00000023610	ENSVVUG00000023613	ENSVVUG00000023615 #12	ENSVVUG00000023618 #12
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Panthera	ANCESTRAL SPECIES	9	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Panthera_a	ANCESTRAL SPECIES	6	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00910000148484	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
lion	MODERN SPECIES	8	ENSPLOG00000011251 #34	ENSPLOG00000011349 #34	ENSPLOG00000011615	SEPTIN2 (ENSPLOG00000011660) #33	HDLBP (ENSPLOG00000011820) #32	ANO7 (ENSPLOG00000012088) #31	PPP1R7 (ENSPLOG00000012498) #30	ENSPLOG00000012697	ENSPLOG00000012740 #29	MTERF4 (ENSPLOG00000012860) #28	ENSPLOG00000012906 #27	CROCC2 (ENSPLOG00000013069) #26	MAB21L4 (ENSPLOG00000013308) #25	AGXT (ENSPLOG00000013397) #24	KIF1A (ENSPLOG00000014164) #23	ENSPLOG00000018271 #22	ENSPLOG00000018344 #20	GPR35 (ENSPLOG00000018360) #20	CAPN10 (ENSPLOG00000018408) #19	RNPEPL1 (ENSPLOG00000018556) #18	DUSP28 (ENSPLOG00000018592) #17	ENSPLOG00000018623 #16	GPC1 (ENSPLOG00000018679) #15	OTOS (ENSPLOG00000018817) #14	COPS9 (ENSPLOG00000018891) #13	ENSPLOG00000018918 #12	NDUFA10 (ENSPLOG00000018943) #10	HDAC4 (ENSPLOG00000018983) #9	TWIST2 (ENSPLOG00000019027) #8	ASB1 (ENSPLOG00000019075) #7	TRAF3IP1 (ENSPLOG00000019150)
leopard	MODERN SPECIES	12	ATG4B (ENSPPRG00000005113)	THAP4 (ENSPPRG00000001382) #37	BOK (ENSPPRG00000023173) #36	STK25 (ENSPPRG00000023379) #35	FARP2 (ENSPPRG00000018957) #34	SEPTIN2 (ENSPPRG00000012154) #33	HDLBP (ENSPPRG00000010215) #32	PPP1R7 (ENSPPRG00000004627) #30	PASK (ENSPPRG00000001870) #29	MTERF4 (ENSPPRG00000016102) #28	SNED1 (ENSPPRG00000013999) #27	CROCC2 (ENSPPRG00000008256) #26	MAB21L4 (ENSPPRG00000006592) #25	AGXT (ENSPPRG00000006319) #24	KIF1A (ENSPPRG00000005573) #23	ENSPPRG00000000892 #22	GPR35 (ENSPPRG00000018190) #20	CAPN10 (ENSPPRG00000022771) #19	RNPEPL1 (ENSPPRG00000017769) #18	DUSP28 (ENSPPRG00000016441) #17	ANKMY1 (ENSPPRG00000014732) #16	GPC1 (ENSPPRG00000006984) #15	OTOS (ENSPPRG00000006023) #14	COPS9 (ENSPPRG00000005448) #13	NDUFA10 (ENSPPRG00000005038) #10	HDAC4 (ENSPPRG00000003105) #9	TWIST2 (ENSPPRG00000017615) #8	ASB1 (ENSPPRG00000000299) #7	TRAF3IP1 (ENSPPRG00000022829)	HES6 (ENSPPRG00000018203)	ILKAP (ENSPPRG00000014102)
Cat	MODERN SPECIES	239	THAP4 (ENSFCAG00000014280) #37	BOK (ENSFCAG00000014277) #36	STK25 (ENSFCAG00000002803) #35	FARP2 (ENSFCAG00000002801) #34	SEPTIN2 (ENSFCAG00000002797) #33	HDLBP (ENSFCAG00000010455) #32	ANO7 (ENSFCAG00000010453) #31	PPP1R7 (ENSFCAG00000010452)	PASK (ENSFCAG00000000959) #29	MTERF4 (ENSFCAG00000010451) #28	SNED1 (ENSFCAG00000010450) #27	CROCC2 (ENSFCAG00000030979) #26	MAB21L4 (ENSFCAG00000010449) #25	AGXT (ENSFCAG00000010448) #24	KIF1A (ENSFCAG00000010434) #23	AQP12 (ENSFCAG00000010433) #22	ENSFCAG00000051459 #20	GPR35 (ENSFCAG00000024715) #20	CAPN10 (ENSFCAG00000012470) #19	RNPEPL1 (ENSFCAG00000012468) #18	DUSP28 (ENSFCAG00000043250) #17	ANKMY1 (ENSFCAG00000012464) #16	GPC1 (ENSFCAG00000024217) #15	OTOS (ENSFCAG00000012462) #14	COPS9 (ENSFCAG00000032763) #13	ENSFCAG00000052029	ENSFCAG00000002985 #12	NDUFA10 (ENSFCAG00000040382) #10	HDAC4 (ENSFCAG00000014232) #9	TWIST2 (ENSFCAG00000037141) #8	ASB1 (ENSFCAG00000001851) #7
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342	ENSGT00940000161398
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342	ENSGT00940000161398
Microbat	MODERN SPECIES	942	BOK (ENSMLUG00000028632) #36	STK25 (ENSMLUG00000007158) #35	ENSMLUG00000022825	FARP2 (ENSMLUG00000007123) #34	SEPTIN2 (ENSMLUG00000007108) #33	HDLBP (ENSMLUG00000005628) #32	ANO7 (ENSMLUG00000005611) #31	ENSMLUG00000005606	PASK (ENSMLUG00000005589) #29	MTERF4 (ENSMLUG00000005579) #28	SNED1 (ENSMLUG00000012911) #27	CROCC2 (ENSMLUG00000022867) #26	MAB21L4 (ENSMLUG00000012906) #25	AGXT (ENSMLUG00000002394) #24	KIF1A (ENSMLUG00000006051) #23	ENSMLUG00000004331 #22	GPR35 (ENSMLUG00000004586) #20	CAPN10 (ENSMLUG00000004607) #19	RNPEPL1 (ENSMLUG00000004601) #18	DUSP28 (ENSMLUG00000004599) #17	ANKMY1 (ENSMLUG00000004589) #16	GPC1 (ENSMLUG00000004583) #15	OTOS (ENSMLUG00000000662) #14	COPS9 (ENSMLUG00000026277) #13	NDUFA10 (ENSMLUG00000005086) #10	HDAC4 (ENSMLUG00000014603) #9	TWIST2 (ENSMLUG00000023316) #8
Greater horseshoe bat	MODERN SPECIES	26	ATG4B (ENSRFEG00010000748)	THAP4 (ENSRFEG00010000777) #37	BOK (ENSRFEG00010000801) #36	STK25 (ENSRFEG00010000825) #35	FARP2 (ENSRFEG00010000873) #34	SEPTIN2 (ENSRFEG00010000923) #33	ENSRFEG00010000976 #32	ANO7 (ENSRFEG00010001001) #31	ENSRFEG00010001029	PASK (ENSRFEG00010001084) #29	MTERF4 (ENSRFEG00010001122) #28	SNED1 (ENSRFEG00010001292) #27	MAB21L4 (ENSRFEG00010001650) #25	AGXT (ENSRFEG00010001703) #24	KIF1A (ENSRFEG00010001843) #23	ENSRFEG00010002117 #22	ENSRFEG00010002142 #20	GPR35 (ENSRFEG00010002157) #20	CAPN10 (ENSRFEG00010002208) #19	RNPEPL1 (ENSRFEG00010002246) #18	DUSP28 (ENSRFEG00010002261) #17	ENSRFEG00010002268 #16	GPC1 (ENSRFEG00010002298) #15	OTOS (ENSRFEG00010002365) #14	COPS9 (ENSRFEG00010002380) #13	NDUFA10 (ENSRFEG00010002397) #10	HDAC4 (ENSRFEG00010002464) #9	TWIST2 (ENSRFEG00010002558) #8	ASB1 (ENSRFEG00010002567) #7	TRAF3IP1 (ENSRFEG00010002606)	PER2 (ENSRFEG00010002711)
Equus	ANCESTRAL SPECIES	15	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059.f #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.n #12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.m #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b.m #7
Donkey	MODERN SPECIES	10	BOK (ENSEASG00005008290) #36	STK25 (ENSEASG00005008279) #35	FARP2 (ENSEASG00005008264) #34	SEPTIN2 (ENSEASG00005008254) #33	HDLBP (ENSEASG00005008249) #32	ENSEASG00005008231 #31	ENSEASG00005025357 #31	ENSEASG00005008227	ENSEASG00005037592 #29	MTERF4 (ENSEASG00005008185) #28	SNED1 (ENSEASG00005008171) #27	CROCC2 (ENSEASG00005008163) #26	MAB21L4 (ENSEASG00005008159) #25	AGXT (ENSEASG00005008154) #24	KIF1A (ENSEASG00005007553) #23	ENSEASG00005007535 #22	GPR35 (ENSEASG00005033753) #20	CAPN10 (ENSEASG00005007529) #19	RNPEPL1 (ENSEASG00005007526) #18	DUSP28 (ENSEASG00005007525) #17	ANKMY1 (ENSEASG00005007496) #16	GPC1 (ENSEASG00005007474) #15	OTOS (ENSEASG00005007467) #14	COPS9 (ENSEASG00005029581) #13	ENSEASG00005030337	ENSEASG00005032886	ENSEASG00005035741 #12	ENSEASG00005023733 #12	NDUFA10 (ENSEASG00005007435) #10	HDAC4 (ENSEASG00005007428) #9	TWIST2 (ENSEASG00005037030) #8
Horse	MODERN SPECIES	27	ATG4B (ENSECAG00000006659)	THAP4 (ENSECAG00000000252) #37	BOK (ENSECAG00000000238) #36	STK25 (ENSECAG00000017650) #35	FARP2 (ENSECAG00000008144) #34	SEPTIN2 (ENSECAG00000017553) #33	HDLBP (ENSECAG00000012829) #32	PPP1R7 (ENSECAG00000017246) #31	PASK (ENSECAG00000011785) #29	MTERF4 (ENSECAG00000011622) #28	SNED1 (ENSECAG00000024612) #27	CROCC2 (ENSECAG00000023710) #26	MAB21L4 (ENSECAG00000023443) #25	AGXT (ENSECAG00000008006) #24	KIF1A (ENSECAG00000014504) #23	AQP12 (ENSECAG00000013785) #22	CAPN10 (ENSECAG00000038173) #19	RNPEPL1 (ENSECAG00000037977) #18	DUSP28 (ENSECAG00000038526) #17	ENSECAG00000047102	ANKMY1 (ENSECAG00000009464) #16	GPC1 (ENSECAG00000014427) #15	OTOS (ENSECAG00000034742) #14	ENSECAG00000057614 #13	OR9S21 (ENSECAG00000037760)	OR9S3 (ENSECAG00000038437)	OR6B2C (ENSECAG00000001007) #12	OR6B2C (ENSECAG00000054325) #12	NDUFA10 (ENSECAG00000021275) #10	HDAC4 (ENSECAG00000017406) #9	TWIST2 (ENSECAG00000038446) #8
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Suina	ANCESTRAL SPECIES	3	ENSGT00900000143170	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Pig	MODERN SPECIES	6	ENSSSCG00000034534	THAP4 (ENSSSCG00000016374) #37	BOK (ENSSSCG00000032684) #36	STK25 (ENSSSCG00000016372) #35	FARP2 (ENSSSCG00000016368) #34	SEPTIN2 (ENSSSCG00000016370) #33	HDLBP (ENSSSCG00000016379) #32	PPP1R7 (ENSSSCG00000016376) #30	PASK (ENSSSCG00000016378) #29	MTERF4 (ENSSSCG00000055566) #28	SNED1 (ENSSSCG00000016381) #27	CROCC2 (ENSSSCG00000036261) #26	ENSSSCG00000016400 #25	AGXT (ENSSSCG00000016402) #24	KIF1A (ENSSSCG00000016401) #23	ENSSSCG00000035083 #22	GPR35 (ENSSSCG00000040095) #20	CAPN10 (ENSSSCG00000037779) #19	RNPEPL1 (ENSSSCG00000016367) #18	DUSP28 (ENSSSCG00000028180) #17	ENSSSCG00000016365 #16	GPC1 (ENSSSCG00000016364) #15	OTOS (ENSSSCG00000047413) #14	COPS9 (ENSSSCG00000020790) #13	ENSSSCG00000037123	ENSSSCG00000045790	ENSSSCG00000038936	ENSSSCG00000020714	ENSSSCG00000060545	ENSSSCG00000032540	ENSSSCG00000051581
Chacoan peccary	MODERN SPECIES	41														ENSCWAG00000020840 #23	ENSCWAG00000020861 #23	ENSCWAG00000020874 #22	GPR35 (ENSCWAG00000020899) #20	CAPN10 (ENSCWAG00000020922) #19	RNPEPL1 (ENSCWAG00000020962) #18	DUSP28 (ENSCWAG00000020974) #17	ENSCWAG00000020981 #16	GPC1 (ENSCWAG00000020997) #15	OTOS (ENSCWAG00000021008) #14	COPS9 (ENSCWAG00000021016) #13	ENSCWAG00000021029	ENSCWAG00000021045	ENSCWAG00000021047	ENSCWAG00000021052	ENSCWAG00000021057	ENSCWAG00000021063 #12	NDUFA10 (ENSCWAG00000021075) #10
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Camelidae	ANCESTRAL SPECIES	87	ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Arabian camel	MODERN SPECIES	31	ENSCDRG00005000190 #36	STK25 (ENSCDRG00005000090) #35	ENSCDRG00005000066 #34	ENSCDRG00005021815 #34	SEPTIN2 (ENSCDRG00005021804) #33	HDLBP (ENSCDRG00005021789) #32	ENSCDRG00005021780	PASK (ENSCDRG00005021771) #29	MTERF4 (ENSCDRG00005021768) #28	ENSCDRG00005021764 #27	ENSCDRG00005021762	CROCC2 (ENSCDRG00005021759) #26	MAB21L4 (ENSCDRG00005021755) #25	AGXT (ENSCDRG00005021754) #24	KIF1A (ENSCDRG00005018268) #23	ENSCDRG00005017630 #22	GPR35 (ENSCDRG00005017612) #20	CAPN10 (ENSCDRG00005017541) #19	RNPEPL1 (ENSCDRG00005017490) #18	DUSP28 (ENSCDRG00005017470) #17	ENSCDRG00005017446 #16	ENSCDRG00005017414 #16	GPC1 (ENSCDRG00005017275) #15	ENSCDRG00005017236 #14	ENSCDRG00005017201 #13	ENSCDRG00005017178	NDUFA10 (ENSCDRG00005016805) #10	HDAC4 (ENSCDRG00005016731) #9	TWIST2 (ENSCDRG00005016712) #8	ASB1 (ENSCDRG00005016668) #7	TRAF3IP1 (ENSCDRG00005016550)
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822
Cetacea	ANCESTRAL SPECIES	14	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00910000148484	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076.q.a #13	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00390000004965.v.b	ENSGT00940000157440 #9	ENSGT00940000161996 #8	ENSGT00940000153969.b #7	ENSGT00720000108822	ENSGT00940000156342
Blue whale	MODERN SPECIES	18	ENSBMSG00010010330	THAP4 (ENSBMSG00010010301) #37	BOK (ENSBMSG00010010287) #36	STK25 (ENSBMSG00010010267) #35	ENSBMSG00010010243 #34	ENSBMSG00010010208 #34	SEPTIN2 (ENSBMSG00010010182) #33	HDLBP (ENSBMSG00010010147) #32	ENSBMSG00010010024	ENSBMSG00010010004	ENSBMSG00010009987 #29	MTERF4 (ENSBMSG00010009975) #28	SNED1 (ENSBMSG00010009944) #27	AGXT (ENSBMSG00010009816) #24	KIF1A (ENSBMSG00010007348) #23	ENSBMSG00010006999 #22	GPR35 (ENSBMSG00010006985) #20	CAPN10 (ENSBMSG00010003227) #19	RNPEPL1 (ENSBMSG00010003134) #18	DUSP28 (ENSBMSG00010003124) #17	GPC1 (ENSBMSG00010003110) #15	OTOS (ENSBMSG00010003101) #14	ENSBMSG00010003093 #13	NDUFA10 (ENSBMSG00010003080) #10	ENSBMSG00010003068	ENSBMSG00010003060	HDAC4 (ENSBMSG00010003049) #9	TWIST2 (ENSBMSG00010003037) #8	ASB1 (ENSBMSG00010003016) #7	TRAF3IP1 (ENSBMSG00010002993)	PER2 (ENSBMSG00010002946)
Pecora	ANCESTRAL SPECIES	2	ENSGT00900000143170.a	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9
Percora_a	ANCESTRAL SPECIES	1	ENSGT00900000143170.a	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00940000157440 #9
Bovidae	ANCESTRAL SPECIES	1	ENSGT00900000143170.a	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b #12	ENSGT00390000016151 #10	ENSGT00960000190821	ENSGT00940000157440 #9
Caprinae	ANCESTRAL SPECIES	2	ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076.o.b #13	ENSGT01100000263494.a.a.a.a.b.a.e.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.b.a.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.a.f.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.a.f.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.b.a.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a
Goat	MODERN SPECIES	22	THAP4 (ENSCHIG00000020478) #37	ENSCHIG00000014554	BOK (ENSCHIG00000026381) #36	STK25 (ENSCHIG00000021875) #35	FARP2 (ENSCHIG00000027255) #34	SEPTIN2 (ENSCHIG00000026614) #33	HDLBP (ENSCHIG00000022364) #32	ENSCHIG00000012347	PASK (ENSCHIG00000007156) #29	MTERF4 (ENSCHIG00000022070) #28	SNED1 (ENSCHIG00000021345) #27	MAB21L4 (ENSCHIG00000026979) #25	AGXT (ENSCHIG00000022496) #24	ENSCHIG00000011947 #23	ENSCHIG00000023705 #23	ENSCHIG00000024491 #22	GPR35 (ENSCHIG00000004634) #20	CAPN10 (ENSCHIG00000016722) #19	RNPEPL1 (ENSCHIG00000007970) #18	DUSP28 (ENSCHIG00000021356) #17	ANKMY1 (ENSCHIG00000014244) #16	GPC1 (ENSCHIG00000025197) #15	OTOS (ENSCHIG00000017843) #14	ENSCHIG00000008166 #13	ENSCHIG00000020160	ENSCHIG00000025801	ENSCHIG00000026856	ENSCHIG00000016935	ENSCHIG00000006733	ENSCHIG00000021888	ENSCHIG00000014668
Rambouillet Sheep	MODERN SPECIES		GAL3ST2 (ENSOARG00020000059)	D2HGDH (ENSOARG00020000060)	ING5 (ENSOARG00020000064)	DTYMK (ENSOARG00020000065)	ATG4B (ENSOARG00020000066)	THAP4 (ENSOARG00020000069) #37	STK25 (ENSOARG00020000074) #35	SEPTIN2 (ENSOARG00020000087) #33	HDLBP (ENSOARG00020000111) #32	ENSOARG00020000194	SNED1 (ENSOARG00020000363) #27	CROCC2 (ENSOARG00020000704) #26	MAB21L4 (ENSOARG00020000754) #25	AGXT (ENSOARG00020000775) #24	KIF1A (ENSOARG00020000824) #23	ENSOARG00020000955 #22	GPR35 (ENSOARG00020000975) #20	CAPN10 (ENSOARG00020001024) #19	RNPEPL1 (ENSOARG00020001165) #18	DUSP28 (ENSOARG00020001183) #17	ENSOARG00020001195 #16	GPC1 (ENSOARG00020001209) #15	ENSOARG00020001243	ENSOARG00020001260	ENSOARG00020001271 #12	ENSOARG00020001276 #12	ENSOARG00020001283 #12	NDUFA10 (ENSOARG00020001299) #10	ENSOARG00020001326	HDAC4 (ENSOARG00020001352) #9	TWIST2 (ENSOARG00020001470) #8
Bovinae	ANCESTRAL SPECIES	1	ENSGT00900000143170.a	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.g #12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.h #12	ENSGT00390000016151 #10	ENSGT00960000190821
Bos	ANCESTRAL SPECIES		ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400.d #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.b.a.a.d	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.a	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.g #12	ENSGT01090000260045.C.e.a.a.a.b.b.b.b.b.h #12
Bos_a	ANCESTRAL SPECIES	65	ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400.d #18	ENSGT00940000160400.c #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.b.a.a.d	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.a.b.a.a	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.a.b.a.b.b.b	ENSGT01100000263494.a.a.a.a.b.a.e.b.a.b
Wild yak	MODERN SPECIES	1292	ENSBMUG00000011686 #37	BOK (ENSBMUG00000011678) #36	STK25 (ENSBMUG00000011663) #35	ENSBMUG00000011602 #34	SEPTIN2 (ENSBMUG00000011562) #33	HDLBP (ENSBMUG00000011512) #32	ENSBMUG00000011436	PASK (ENSBMUG00000011286) #29	MTERF4 (ENSBMUG00000011109) #28	SNED1 (ENSBMUG00000011079) #27	ENSBMUG00000010864 #26	MAB21L4 (ENSBMUG00000010834) #25	AGXT (ENSBMUG00000010816) #24	ENSBMUG00000010074 #23	ENSBMUG00000009636 #23	ENSBMUG00000009622 #22	CAPN10 (ENSBMUG00000009586) #19	RNPEPL1 (ENSBMUG00000009570) #18	ENSBMUG00000009555 #16	GPC1 (ENSBMUG00000009530) #15	OTOS (ENSBMUG00000009516) #14	COPS9 (ENSBMUG00000009506) #13	ENSBMUG00000009500
Domestic yak	MODERN SPECIES	22	BOK (ENSBGRG00000001796) #36	STK25 (ENSBGRG00000001737) #35	ENSBGRG00000001709 #34	ENSBGRG00000001659 #34	SEPTIN2 (ENSBGRG00000001628) #33	HDLBP (ENSBGRG00000001532) #32	PPP1R7 (ENSBGRG00000001494) #30	PASK (ENSBGRG00000001050) #29	MTERF4 (ENSBGRG00000000960) #28	SNED1 (ENSBGRG00000000812) #27	ENSBGRG00000000737 #26	MAB21L4 (ENSBGRG00000000729) #25	AGXT (ENSBGRG00000000706) #24	ENSBGRG00000000690	KIF1A (ENSBGRG00000000508) #23	ENSBGRG00000000458 #22	ENSBGRG00000000438 #20	CAPN10 (ENSBGRG00000000315) #19	RNPEPL1 (ENSBGRG00000000277) #18	ENSBGRG00000000268 #18	DUSP28 (ENSBGRG00000000259) #17	ENSBGRG00000000242 #16	GPC1 (ENSBGRG00000023361) #15	OTOS (ENSBGRG00000023306) #14	COPS9 (ENSBGRG00000023279) #13	ENSBGRG00000023162	ENSBGRG00000023144	ENSBGRG00000023111	ENSBGRG00000023078	ENSBGRG00000022991	ENSBGRG00000022979
Bos_b	ANCESTRAL SPECIES	45	ENSGT00530000063000.a.b.b	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000162473	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400.d #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a.e.b.b
Hybrid Bos Indicus	MODERN SPECIES	22	ING5 (ENSBIXG00005018529)	DTYMK (ENSBIXG00005003000)	ATG4B (ENSBIXG00005018568)	THAP4 (ENSBIXG00005018636) #37	BOK (ENSBIXG00005018673) #36	STK25 (ENSBIXG00005018864) #35	FARP2 (ENSBIXG00005018965) #34	SEPTIN2 (ENSBIXG00005019099) #33	HDLBP (ENSBIXG00005019344) #32	ENSBIXG00005019419	PASK (ENSBIXG00005019482) #29	SNED1 (ENSBIXG00005019613) #27	CROCC2 (ENSBIXG00005019657) #26	MAB21L4 (ENSBIXG00005019680) #25	AGXT (ENSBIXG00005019708) #24	ENSBIXG00005019822 #22	ENSBIXG00005019852 #20	CAPN10 (ENSBIXG00005019942) #19	RNPEPL1 (ENSBIXG00005006882) #18	DUSP28 (ENSBIXG00005019981) #17	ENSBIXG00005020001 #16	KIF1A (ENSBIXG00005020167) #23	GPC1 (ENSBIXG00005020230) #15	ENSBIXG00005003395 #14	COPS9 (ENSBIXG00005020275) #13	ENSBIXG00005003411	ENSBIXG00005020312	ENSBIXG00005020329	ENSBIXG00005007837	ENSBIXG00005020349	ENSBIXG00005003434
Cow	MODERN SPECIES	22	ATG4B (ENSBTAG00000015401)	THAP4 (ENSBTAG00000013253) #37	BOK (ENSBTAG00000008711) #36	STK25 (ENSBTAG00000009676) #35	FARP2 (ENSBTAG00000013110) #34	SEPTIN2 (ENSBTAG00000002608) #33	HDLBP (ENSBTAG00000004315) #32	PPP1R7 (ENSBTAG00000000789)	PASK (ENSBTAG00000000785) #29	MTERF4 (ENSBTAG00000000784) #28	SNED1 (ENSBTAG00000014132) #27	CROCC2 (ENSBTAG00000005168) #26	MAB21L4 (ENSBTAG00000012374) #25	AGXT (ENSBTAG00000005797) #24	KIF1A (ENSBTAG00000011538) #23	AQP12 (ENSBTAG00000003389) #22	GPR35 (ENSBTAG00000030193) #20	CAPN10 (ENSBTAG00000002809) #19	RNPEPL1 (ENSBTAG00000007215) #18	DUSP28 (ENSBTAG00000049766) #17	ANKMY1 (ENSBTAG00000003593) #16	ENSBTAG00000051074 #16	GPC1 (ENSBTAG00000015996) #15	OTOS (ENSBTAG00000020592) #14	COPS9 (ENSBTAG00000010910) #13	OR9S15 (ENSBTAG00000053267)	OR9S40 (ENSBTAG00000054249)	OR9S36 (ENSBTAG00000048944)	AKAP17A (ENSBTAG00000054242)	P2RY8 (ENSBTAG00000047839)	IL3RA (ENSBTAG00000049808)
Siberian musk deer	MODERN SPECIES	1129															ENSMMSG00000008264 #23	ENSMMSG00000008229 #22	GPR35 (ENSMMSG00000008207) #20	CAPN10 (ENSMMSG00000007589) #19	RNPEPL1 (ENSMMSG00000007521) #18	DUSP28 (ENSMMSG00000007501) #17	ENSMMSG00000007420 #16	GPC1 (ENSMMSG00000007367) #15
Yarkand deer	MODERN SPECIES	12	DTYMK (ENSCHYG00000005997)	ATG4B (ENSCHYG00000005974)	ENSCHYG00000005951	THAP4 (ENSCHYG00000005901) #37	ENSCHYG00000005861 #36	STK25 (ENSCHYG00000005741) #35	FARP2 (ENSCHYG00000005254) #34	ENSCHYG00000005057 #33	HDLBP (ENSCHYG00000025206) #32	ENSCHYG00000025037	PASK (ENSCHYG00000024901) #29	SNED1 (ENSCHYG00000024133) #27	MAB21L4 (ENSCHYG00000023894) #25	AGXT (ENSCHYG00000023786) #24	KIF1A (ENSCHYG00000022459) #23	ENSCHYG00000022230 #22	ENSCHYG00000022175 #20	CAPN10 (ENSCHYG00000021266) #19	RNPEPL1 (ENSCHYG00000021066) #18	DUSP28 (ENSCHYG00000021024) #17	ANKMY1 (ENSCHYG00000020534) #16	GPC1 (ENSCHYG00000020320) #15	OTOS (ENSCHYG00000020260) #14	ENSCHYG00000020217 #13	ENSCHYG00000020172	ENSCHYG00000020132	ENSCHYG00000020095	ENSCHYG00000020057	ENSCHYG00000019996	NDUFA10 (ENSCHYG00000019837) #10	HDAC4 (ENSCHYG00000019442) #9
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00530000063816.d #22
Common shrew	MODERN SPECIES	12963																ENSSARG00000005010 #22
Hedgehog	MODERN SPECIES	7685																ENSEEUG00000009867 #22
Atlantogenata	DUPLICATION
Atlantogenata	ANCESTRAL SPECIES	300															ENSGT00510000050415.C	ENSGT00530000063816.d.a #22
Xenarthra	ANCESTRAL SPECIES	2016															ENSGT00510000050415.C	ENSGT00530000063816.d.a #22
Armadillo	MODERN SPECIES	4748														ENSDNOG00000042370	ENSDNOG00000037031	ENSDNOG00000047672 #22	ENSDNOG00000044403	KIF1A (ENSDNOG00000040374) #23
Atlantogenata	ANCESTRAL SPECIES	63	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d.b #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a
Afrotheria	ANCESTRAL SPECIES	74	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000162473	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d.b #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a
Tenrec	MODERN SPECIES	15927																ENSETEG00000018870 #22
Afrotheria_a	ANCESTRAL SPECIES	73	ENSGT00940000158447 #37	ENSGT01090000260100.B #36	ENSGT00940000153476.a #35	ENSGT00940000158642 #34	ENSGT00940000155098 #33	ENSGT00900000141059 #32	ENSGT00940000158551.k.a #31	ENSGT00940000158551.k.b #30	ENSGT00940000159035 #29	ENSGT00460000041648 #28	ENSGT00940000160730 #27	ENSGT00940000162689 #26	ENSGT01050000244976.b.b.b.a.a.b #25	ENSGT00940000153241.B #24	ENSGT00940000156474 #23	ENSGT00530000063816.d.b #22	ENSGT01040000240444.A.b.a.b #20	ENSGT00940000159706 #19	ENSGT00940000160400 #18	ENSGT00940000161528 #17	ENSGT00460000041630 #16	ENSGT00390000011600 #14	ENSGT00390000000076 #13	ENSGT01100000263494.a.a.a.a.b.a
Elephant	MODERN SPECIES	24	THAP4 (ENSLAFG00000018001) #37	BOK (ENSLAFG00000026100) #36	STK25 (ENSLAFG00000025786) #35	FARP2 (ENSLAFG00000014569) #34	ENSLAFG00000011964 #33	HDLBP (ENSLAFG00000014826) #32	ANO7 (ENSLAFG00000006955) #31	PPP1R7 (ENSLAFG00000003743) #30	PASK (ENSLAFG00000003737) #29	MTERF4 (ENSLAFG00000021960) #28	SNED1 (ENSLAFG00000003732) #27	CROCC2 (ENSLAFG00000027555) #26	MAB21L4 (ENSLAFG00000030543) #25	AGXT (ENSLAFG00000005246) #24	KIF1A (ENSLAFG00000029366) #23	ENSLAFG00000002017 #22	GPR35 (ENSLAFG00000020820) #20	CAPN10 (ENSLAFG00000014241) #19	RNPEPL1 (ENSLAFG00000028284) #18	DUSP28 (ENSLAFG00000002034) #17	ANKMY1 (ENSLAFG00000006905) #16	OTOS (ENSLAFG00000001594) #14	COPS9 (ENSLAFG00000028043) #13	ENSLAFG00000028058	ENSLAFG00000025808	ENSLAFG00000032555	ENSLAFG00000029602	ENSLAFG00000028548	ENSLAFG00000027695	ENSLAFG00000027069 ##12	ENSLAFG00000029483 #12
Xenarthra	ANCESTRAL SPECIES																	ENSGT00530000063816.d.b #22
Armadillo	MODERN SPECIES	2653															ENSDNOG00000036380	ENSDNOG00000038032 #22	STX7 (ENSDNOG00000000295)
Marsupialia	ANCESTRAL SPECIES	5	ENSGT01030000234598.a.a.a	ENSGT00940000161784	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000154388.f	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b	ENSGT00940000153249.b.d	ENSGT00940000156601
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT01030000234598.a.a.a	ENSGT00940000161784	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055.f	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b	ENSGT00940000153249.b.d	ENSGT00940000156601
Diprotodontia	ANCESTRAL SPECIES	23	ENSGT01030000234598.a.a.a	ENSGT00940000161784	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055.f	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b	ENSGT00940000153249.b.d	ENSGT00940000156601
Diprotodontia_a	ANCESTRAL SPECIES	24	ENSGT01030000234598.a.a.a	ENSGT00940000161784	ENSGT00940000160780	ENSGT00940000157384	ENSGT00940000160019	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055.e.b	ENSGT00390000003022.e	ENSGT00940000156055.f	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00940000154659.b	ENSGT00390000016814	ENSGT00940000157741	ENSGT00950000182972.a.a.a.b
Common wonbat	MODERN SPECIES	1139	TNK2 (ENSVURG00010007734)	TFRC (ENSVURG00010007776)	ENSVURG00010007793	SLC51A (ENSVURG00010007812)	PCYT1A (ENSVURG00010007821)	DYNLT2B (ENSVURG00010007833)	ENSVURG00010007843	UBXN7 (ENSVURG00010007856)	RNF168 (ENSVURG00010007878)	WDR53 (ENSVURG00010007886)	FBXO45 (ENSVURG00010007892)	NRROS (ENSVURG00010007903)	CEP19 (ENSVURG00010007914)	PIGX (ENSVURG00010007925)	PAK2 (ENSVURG00010007934)	ENSVURG00010007953 #22	ENSVURG00010007957	ENSVURG00010007970	ENSVURG00010007978	ENSVURG00010007987	ENSVURG00010007994	SLCO2A1 (ENSVURG00010008188)	RYK (ENSVURG00010008208)	AMOTL2 (ENSVURG00010008268)	ANAPC13 (ENSVURG00010008286)	CEP63 (ENSVURG00010008298)	KY (ENSVURG00010008351)	ENSVURG00010008400	ENSVURG00010008412	PPP2R3A (ENSVURG00010008434)	MSL2 (ENSVURG00010008446)
Wallaby	MODERN SPECIES	12406																ENSMEUG00000006659 #22
Opossum	MODERN SPECIES	3	TFRC (ENSMODG00000018427)	ENSMODG00000018429	SLC51A (ENSMODG00000018430)	PCYT1A (ENSMODG00000018432)	TM4SF19 (ENSMODG00000018434)	ENSMODG00000018437	RNF168 (ENSMODG00000018442)	SMCO1 (ENSMODG00000046643)	WDR53 (ENSMODG00000018445)	FBXO45 (ENSMODG00000042553)	NRROS (ENSMODG00000018447)	ENSMODG00000018451	CEP19 (ENSMODG00000018453)	ENSMODG00000018455	ENSMODG00000018459	ENSMODG00000018460 #22	ENSMODG00000018462	ENSMODG00000018479	ENSMODG00000028043	ENSMODG00000033772	NDUFB11 (ENSMODG00000018491)	SRPRB (ENSMODG00000018493)	ENSMODG00000018494	SLCO2A1 (ENSMODG00000018498)	ENSMODG00000049702	RYK (ENSMODG00000018505)	AMOTL2 (ENSMODG00000018508)	ENSMODG00000025019	ANAPC13 (ENSMODG00000018510)	CEP63 (ENSMODG00000018511)	KY (ENSMODG00000018514)
Platypus	MODERN SPECIES		TNK2 (ENSOANG00000050920)	TFRC (ENSOANG00000038776)	ZDHHC19 (ENSOANG00000041859)	SLC51A (ENSOANG00000039164)	PCYT1A (ENSOANG00000044036)	ENSOANG00000050519	UBXN7 (ENSOANG00000031359)	RNF168 (ENSOANG00000021498)	ENSOANG00000051116	ENSOANG00000040497	ENSOANG00000048148	NRROS (ENSOANG00000045010)	CEP19 (ENSOANG00000047561)	ENSOANG00000019945	PAK2 (ENSOANG00000009204)	ENSOANG00000051179 #22	LTF (ENSOANG00000011228)	ENSOANG00000014581	RAB6B (ENSOANG00000047093)	SLCO2A1 (ENSOANG00000022240)	RYK (ENSOANG00000004663)	AMOTL2 (ENSOANG00000006387)	ENSOANG00000051132	ENSOANG00000028476	KY (ENSOANG00000050223)	ENSOANG00000013591	EPHB1 (ENSOANG00000032033)	PPP2R3A (ENSOANG00000003406)	MSL2 (ENSOANG00000044917)	PCCB (ENSOANG00000047683)	STAG1 (ENSOANG00000004382)
Sauria	ANCESTRAL SPECIES	9	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00510000047981.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342	ENSGT00470000042284
Archelosauria	ANCESTRAL SPECIES	11	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00510000047981.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342	ENSGT00470000042284
Archosauria	ANCESTRAL SPECIES	48	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577
Aves	ANCESTRAL SPECIES	49	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00940000154951	ENSGT00940000154913	ENSGT00950000183009
Neognathae	ANCESTRAL SPECIES	9	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00940000154951	ENSGT00940000154913	ENSGT00950000183009	ENSGT00390000018807	ENSGT00940000159292	ENSGT00390000001159	ENSGT00940000155792	ENSGT00470000042284	ENSGT00940000160342	ENSGT00940000160749.b	ENSGT00940000158655
Neognathae_b	ANCESTRAL SPECIES	11	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00940000154951	ENSGT00940000154913	ENSGT00950000183009	ENSGT00390000018807	ENSGT00940000159292	ENSGT00390000001159	ENSGT00940000155792	ENSGT00470000042284	ENSGT00940000160342	ENSGT00940000160749.b	ENSGT00940000158655
Passeriformes	ANCESTRAL SPECIES	9	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00940000154951	ENSGT00940000154913	ENSGT00950000183009	ENSGT00390000018807	ENSGT00940000159292	ENSGT00390000001159	ENSGT00940000155792	ENSGT00470000042284	ENSGT00940000160342	ENSGT00940000160749.b	ENSGT00940000158655
Great tit	MODERN SPECIES	29	ATG4B (ENSPMJG00000016526)	DTYMK (ENSPMJG00000016527)	ING5 (ENSPMJG00000016528)	D2HGDH (ENSPMJG00000016529)	GAL3ST2 (ENSPMJG00000016530)	NEU4 (ENSPMJG00000016531)	TM4SF19 (ENSPMJG00000016532)	UBXN7 (ENSPMJG00000016533)	RNF168 (ENSPMJG00000016534)	WDR53 (ENSPMJG00000016535)	FBXO45 (ENSPMJG00000016536)	NRROS (ENSPMJG00000016537)	CEP19 (ENSPMJG00000016538)	PIGX (ENSPMJG00000016539)	PAK2 (ENSPMJG00000016540)	ENSPMJG00000016541 #22	ENSPMJG00000016542	LTF (ENSPMJG00000016544)	ENSPMJG00000016545	SLCO2A1 (ENSPMJG00000016546)	RYK (ENSPMJG00000016548)	AMOTL2 (ENSPMJG00000016549)	SENP2 (ENSPMJG00000016551)	IGF2BP2 (ENSPMJG00000016552)	TRA2B (ENSPMJG00000016553)	CFAP410 (ENSPMJG00000016554)	PFKL (ENSPMJG00000016555)	ENSPMJG00000016556	DNAJB11 (ENSPMJG00000016557)	TBCCD1 (ENSPMJG00000016558)	CRYGS (ENSPMJG00000016559)
Passeriformes_d	ANCESTRAL SPECIES	10	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00940000154951	ENSGT00940000154913	ENSGT00950000183009	ENSGT00390000018807	ENSGT00940000159292	ENSGT00390000001159	ENSGT00940000155792	ENSGT00470000042284	ENSGT00940000160342	ENSGT00940000160749.b	ENSGT00940000158655
Flycatcher	MODERN SPECIES	28	DTYMK (ENSFALG00000003256)	ING5 (ENSFALG00000028331)	D2HGDH (ENSFALG00000003213)	GAL3ST2 (ENSFALG00000025391)	NEU4 (ENSFALG00000023218)	TM4SF19 (ENSFALG00000027610)	ENSFALG00000022967	UBXN7 (ENSFALG00000023973)	RNF168 (ENSFALG00000023716)	WDR53 (ENSFALG00000003141)	FBXO45 (ENSFALG00000023748)	NRROS (ENSFALG00000003124)	CEP19 (ENSFALG00000028051)	PIGX (ENSFALG00000003105)	ENSFALG00000003098	ENSFALG00000003091 #22	ENSFALG00000026140	ENSFALG00000003053	ENSFALG00000013289	SLCO2A1 (ENSFALG00000024047)	ENSFALG00000013310	AMOTL2 (ENSFALG00000013335)	SENP2 (ENSFALG00000013329)	ENSFALG00000013346	TRA2B (ENSFALG00000013347)	ENSFALG00000013357	ENSFALG00000026418	ENSFALG00000013353	ENSFALG00000013377	DNAJB11 (ENSFALG00000013379)	ENSFALG00000013382
Passeriformes_g	ANCESTRAL SPECIES	11	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00940000154951	ENSGT00940000154913	ENSGT00950000183009	ENSGT00390000018807	ENSGT00940000159292	ENSGT00390000001159	ENSGT00940000155792	ENSGT00470000042284	ENSGT00940000160342	ENSGT00940000160749.b	ENSGT00940000158655
Passeroidea	ANCESTRAL SPECIES	13	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22
Common canary	MODERN SPECIES	10	ATG4B (ENSSCAG00000008031)	DTYMK (ENSSCAG00000008012)	ING5 (ENSSCAG00000008000)	D2HGDH (ENSSCAG00000007988)	GAL3ST2 (ENSSCAG00000007984)	NEU4 (ENSSCAG00000007982)	TM4SF19 (ENSSCAG00000007980)	UBXN7 (ENSSCAG00000007974)	RNF168 (ENSSCAG00000007972)	WDR53 (ENSSCAG00000007968)	FBXO45 (ENSSCAG00000007967)	NRROS (ENSSCAG00000007966)	CEP19 (ENSSCAG00000007963)	PIGX (ENSSCAG00000007961)	PAK2 (ENSSCAG00000007956)	ENSSCAG00000007950 #22	ENSSCAG00000007945	ENSSCAG00000007943	DGKG (ENSSCAG00000007938)	ETV5 (ENSSCAG00000007931)	BOK (ENSSCAG00000007927) #36	STK25 (ENSSCAG00000007924) #35	FARP2 (ENSSCAG00000007894) #34	SEPTIN2 (ENSSCAG00000007874) #33	HDLBP (ENSSCAG00000007865) #32	ENSSCAG00000007856	PASK (ENSSCAG00000007795) #29	SNED1 (ENSSCAG00000007705) #27	MAB21L4 (ENSSCAG00000007684) #25	AGXT (ENSSCAG00000007674) #24	KIF1A (ENSSCAG00000006156) #23
Zebra finch	MODERN SPECIES	31	DTYMK (ENSTGUG00000005937)	ING5 (ENSTGUG00000005928)	D2HGDH (ENSTGUG00000005907)	GAL3ST2 (ENSTGUG00000005898)	NEU4 (ENSTGUG00000019131)	TM4SF19 (ENSTGUG00000005895)	UBXN7 (ENSTGUG00000005882)	RNF168 (ENSTGUG00000005879)	WDR53 (ENSTGUG00000020679)	FBXO45 (ENSTGUG00000027628)	NRROS (ENSTGUG00000005871)	CEP19 (ENSTGUG00000022483)	ENSTGUG00000020740	ENSTGUG00000005859	PAK2 (ENSTGUG00000005832)	ENSTGUG00000005831 #22	ENSTGUG00000005823	ENSTGUG00000023615	ENSTGUG00000025523	ENSTGUG00000022631	SFT2D3 (ENSTGUG00000023642)	WDR33 (ENSTGUG00000005784)	POLR2D (ENSTGUG00000005773)	AMMECR1L (ENSTGUG00000005761)	SAP130 (ENSTGUG00000005735)	UGGT1 (ENSTGUG00000005668)	HS6ST1 (ENSTGUG00000005665)	PLEKHB2 (ENSTGUG00000022667)	FAM168B (ENSTGUG00000023304)	ENSTGUG00000005587	AMER3 (ENSTGUG00000019407)
Medium ground finch	MODERN SPECIES	83	ATG4B (ENSGFOG00000014102)	DTYMK (ENSGFOG00000014094)	ING5 (ENSGFOG00000014091)	D2HGDH (ENSGFOG00000014089)	GAL3ST2 (ENSGFOG00000014088)	NEU4 (ENSGFOG00000014086)	TM4SF19 (ENSGFOG00000014084)	UBXN7 (ENSGFOG00000014083)	RNF168 (ENSGFOG00000014080)	WDR53 (ENSGFOG00000014079)	FBXO45 (ENSGFOG00000014077)	NRROS (ENSGFOG00000014075)	CEP19 (ENSGFOG00000014073)	PIGX (ENSGFOG00000014071)	PAK2 (ENSGFOG00000014069)	ENSGFOG00000014063 #22	ENSGFOG00000014058	LTF (ENSGFOG00000014052)	ENSGFOG00000014048	SLCO2A1 (ENSGFOG00000013927)	RYK (ENSGFOG00000013895)	AMOTL2 (ENSGFOG00000013891)	SENP2 (ENSGFOG00000013887)	IGF2BP2 (ENSGFOG00000013884)	TRA2B (ENSGFOG00000013881)	CFAP410 (ENSGFOG00000013879)	PFKL (ENSGFOG00000013741)	DNAJB11 (ENSGFOG00000013713)	TBCCD1 (ENSGFOG00000013709)	CRYGS (ENSGFOG00000013707)	SOX14 (ENSGFOG00000013705)
Neognathae_c	ANCESTRAL SPECIES	13	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00940000154951	ENSGT00940000154913	ENSGT00950000183009	ENSGT00390000018807	ENSGT00940000159292	ENSGT00390000001159	ENSGT00940000155792	ENSGT00470000042284	ENSGT00940000160342	ENSGT00940000160749.b	ENSGT00940000158655
Kakapo	MODERN SPECIES	25	ENSSHBG00005014116	HENMT1 (ENSSHBG00005014096)	EEIG2 (ENSSHBG00005014073)	SLC25A24 (ENSSHBG00005014056)	VAV3 (ENSSHBG00005014042)	NTNG1 (ENSSHBG00005014029)	ZNHIT6 (ENSSHBG00005013996)	CCN1 (ENSSHBG00005013970)	DDAH1 (ENSSHBG00005013956)	ENSSHBG00005013944	C1orf52 (ENSSHBG00005013938)	SYDE2 (ENSSHBG00005013927)	CEP19 (ENSSHBG00005013915)	PIGX (ENSSHBG00005013903)	PAK2 (ENSSHBG00005013890)	ENSSHBG00005013862 #22	ENSSHBG00005013851	LTF (ENSSHBG00005013835)	ENSSHBG00005013822	SLCO2A1 (ENSSHBG00005013808)	RYK (ENSSHBG00005013798)	AMOTL2 (ENSSHBG00005013786)	SENP2 (ENSSHBG00005013766)	IGF2BP2 (ENSSHBG00005013718)	TRA2B (ENSSHBG00005013696)	CFAP410 (ENSSHBG00005013690)	PFKL (ENSSHBG00005013670)	ENSSHBG00005013655	DNAJB11 (ENSSHBG00005013648)	TBCCD1 (ENSSHBG00005013633)	CRYGS (ENSSHBG00005013620)
Golden eagle	MODERN SPECIES	1	ATG4B (ENSACCG00020005995)	DTYMK (ENSACCG00020005969)	ING5 (ENSACCG00020005952)	D2HGDH (ENSACCG00020005925)	GAL3ST2 (ENSACCG00020005907)	NEU4 (ENSACCG00020005884)	TM4SF19 (ENSACCG00020005863)	UBXN7 (ENSACCG00020005823)	RNF168 (ENSACCG00020005790)	WDR53 (ENSACCG00020005777)	FBXO45 (ENSACCG00020005762)	NRROS (ENSACCG00020005756)	CEP19 (ENSACCG00020005735)	PIGX (ENSACCG00020005724)	PAK2 (ENSACCG00020005707)	ENSACCG00020005680 #22	ENSACCG00020005650	LTF (ENSACCG00020005622)	ENSACCG00020005597	SLCO2A1 (ENSACCG00020005577)	RYK (ENSACCG00020005542)	AMOTL2 (ENSACCG00020005482)	SENP2 (ENSACCG00020005450)	IGF2BP2 (ENSACCG00020005226)	TRA2B (ENSACCG00020005000)	CFAP410 (ENSACCG00020004989)	PFKL (ENSACCG00020004978)	ENSACCG00020004967	DNAJB11 (ENSACCG00020004957)	TBCCD1 (ENSACCG00020004948)	CRYGS (ENSACCG00020004941)
Galloanserae	ANCESTRAL SPECIES	33	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00940000154951	ENSGT00940000154913	ENSGT00950000183009	ENSGT00390000018807	ENSGT00940000159292	ENSGT00390000001159	ENSGT00940000155792	ENSGT00470000042284	ENSGT00940000160342	ENSGT00940000160749.b	ENSGT00940000158655
Anatidae	ANCESTRAL SPECIES	29	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00940000154951	ENSGT00940000154913	ENSGT00950000183009	ENSGT00390000018807	ENSGT00940000159292	ENSGT00390000001159	ENSGT00940000155792	ENSGT00470000042284	ENSGT00940000160342	ENSGT00940000160749.b	ENSGT00940000158655
Duck	MODERN SPECIES	27	ATG4B (ENSAPLG00000015334)	DTYMK (ENSAPLG00000026754)	ING5 (ENSAPLG00000013706)	D2HGDH (ENSAPLG00000014011)	GAL3ST2 (ENSAPLG00000014587)	NEU4 (ENSAPLG00000020688)	TM4SF19 (ENSAPLG00000015072)	UBXN7 (ENSAPLG00000015073)	RNF168 (ENSAPLG00000015285)	WDR53 (ENSAPLG00000015360)	FBXO45 (ENSAPLG00000015407)	NRROS (ENSAPLG00000015411)	CEP19 (ENSAPLG00000015449)	PIGX (ENSAPLG00000015450)	PAK2 (ENSAPLG00000015483)	ENSAPLG00000015781 #22	ENSAPLG00000015784	LTF (ENSAPLG00000015785)	ENSAPLG00000016555	SLCO2A1 (ENSAPLG00000016397)	RYK (ENSAPLG00000001913)	AMOTL2 (ENSAPLG00000002590)	SENP2 (ENSAPLG00000003136)	IGF2BP2 (ENSAPLG00000003217)	TRA2B (ENSAPLG00000003904)	CFAP410 (ENSAPLG00000004295)	PFKL (ENSAPLG00000004349)	ENSAPLG00000005279	DNAJB11 (ENSAPLG00000005283)	TBCCD1 (ENSAPLG00000005621)	CRYGS (ENSAPLG00000005815)
Pink-footed goose	MODERN SPECIES	71	ATG4B (ENSABRG00000020005)	DTYMK (ENSABRG00000020011)	ING5 (ENSABRG00000020014)	D2HGDH (ENSABRG00000020017)	GAL3ST2 (ENSABRG00000020035)	NEU4 (ENSABRG00000020042)	TM4SF19 (ENSABRG00000020048)	UBXN7 (ENSABRG00000020056)	RNF168 (ENSABRG00000020067)	WDR53 (ENSABRG00000020072)	FBXO45 (ENSABRG00000020074)	NRROS (ENSABRG00000020077)	CEP19 (ENSABRG00000020078)	ENSABRG00000020082	PAK2 (ENSABRG00000020084)	ENSABRG00000020089 #22	ENSABRG00000020101	LTF (ENSABRG00000020110)	ENSABRG00000020128	SLCO2A1 (ENSABRG00000020133)	RYK (ENSABRG00000020144)	AMOTL2 (ENSABRG00000020184)	SENP2 (ENSABRG00000020197)	IGF2BP2 (ENSABRG00000020221)	TRA2B (ENSABRG00000020304)	CFAP410 (ENSABRG00000020307)	PFKL (ENSABRG00000020310)	ENSABRG00000020315	DNAJB11 (ENSABRG00000020319)	TBCCD1 (ENSABRG00000020323)	CRYGS (ENSABRG00000020326)
Phasianidae	ANCESTRAL SPECIES	9	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119.i	ENSGT00940000156577	ENSGT00940000154951	ENSGT00940000154913	ENSGT00950000183009	ENSGT00390000018807	ENSGT00940000159292	ENSGT00390000001159	ENSGT00940000155792	ENSGT00470000042284	ENSGT00940000160342	ENSGT00940000160749.b	ENSGT00940000158655
Japanese quail	MODERN SPECIES	27	DTYMK (ENSCJPG00005001666)	ING5 (ENSCJPG00005001656)	D2HGDH (ENSCJPG00005001651)	GAL3ST2 (ENSCJPG00005001643)	NEU4 (ENSCJPG00005001638)	TM4SF19 (ENSCJPG00005001630)	UBXN7 (ENSCJPG00005001388)	RNF168 (ENSCJPG00005001374)	WDR53 (ENSCJPG00005001369)	FBXO45 (ENSCJPG00005001364)	NRROS (ENSCJPG00005001359)	CEP19 (ENSCJPG00005001358)	ENSCJPG00005001354	ENSCJPG00005001352	ENSCJPG00005001345	ENSCJPG00005001313 #22	ENSCJPG00005001305	LTF (ENSCJPG00005001123)	ENSCJPG00005001070	SLCO2A1 (ENSCJPG00005001018)	RYK (ENSCJPG00005000938)	AMOTL2 (ENSCJPG00005000903)	SENP2 (ENSCJPG00005019633)	IGF2BP2 (ENSCJPG00005019295)	TRA2B (ENSCJPG00005019278)	CFAP410 (ENSCJPG00005019277)	ENSCJPG00005019224	DNAJB11 (ENSCJPG00005019213)	TBCCD1 (ENSCJPG00005019212)	CRYGS (ENSCJPG00005019211)	SOX14 (ENSCJPG00005019210)
Phasianidae_b	ANCESTRAL SPECIES	12	ENSGT00530000063000.a.b.b	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT01080000257336.a.c.b	ENSGT00940000155119.i	ENSGT00940000156577	ENSGT00940000154951	ENSGT00940000154913	ENSGT00950000183009	ENSGT00390000018807	ENSGT00940000159292	ENSGT00390000001159	ENSGT00940000155792	ENSGT00470000042284	ENSGT00940000160342	ENSGT00940000160749.b	ENSGT00940000158655
Turkey	MODERN SPECIES	2	ENSMGAG00000019433	ENSMGAG00000002653	ENSMGAG00000002636	ENSMGAG00000002693	DNAJB11 (ENSMGAG00000002662)	ENSMGAG00000002836	ENSMGAG00000002853	ENSMGAG00000002904	ENSMGAG00000021750	ENSMGAG00000002929	ENSMGAG00000002948	ENSMGAG00000017878	ENSMGAG00000019451	ENSMGAG00000003010	TF (ENSMGAG00000003078)	ENSMGAG00000019705 #22	ENSMGAG00000003154	ENSMGAG00000003166	FBXO45 (ENSMGAG00000003238)	NRROS (ENSMGAG00000003232)	CEP19 (ENSMGAG00000003224)	PIGX (ENSMGAG00000003201)	ENSMGAG00000003252	ENSMGAG00000018260	ENSMGAG00000003332	ENSMGAG00000003321	ENSMGAG00000003292	ENSMGAG00000003262	ENSMGAG00000003345	ENSMGAG00000003364	ENSMGAG00000017774
Chicken	MODERN SPECIES	38	ATG4B (ENSGALG00010024918)	DTYMK (ENSGALG00010024900)	ING5 (ENSGALG00010024883)	D2HGDH (ENSGALG00010024879)	GAL3ST2 (ENSGALG00010024875)	NEU4 (ENSGALG00010024860)	TM4SF19 (ENSGALG00010024844)	UBXN7 (ENSGALG00010024825)	RNF168 (ENSGALG00010024813)	WDR53 (ENSGALG00010024804)	FBXO45 (ENSGALG00010024798)	NRROS (ENSGALG00010024795)	CEP19 (ENSGALG00010024781)	PIGX (ENSGALG00010024755)	PAK2 (ENSGALG00010024742)	AQP12A (ENSGALG00010024730) #22	ENSGALG00010024727	TF (ENSGALG00010024717)	SRPRB (ENSGALG00010024714)	SLCO2A1 (ENSGALG00010024705)	RYK (ENSGALG00010024687)	AMOTL2 (ENSGALG00010024678)	SENP2 (ENSGALG00010024670)	IGF2BP2 (ENSGALG00010024655)	TRA2B (ENSGALG00010024641)	CFAP410 (ENSGALG00010024630)	PFKL (ENSGALG00010024610)	PROCR (ENSGALG00010024602)	DNAJB11 (ENSGALG00010024597)	TBCCD1 (ENSGALG00010024585)	CRYGS (ENSGALG00010024577)
African ostrich	MODERN SPECIES	321	DTYMK (ENSSCUG00000004529)	ING5 (ENSSCUG00000004549)	D2HGDH (ENSSCUG00000004551)	ENSSCUG00000004555	GAL3ST2 (ENSSCUG00000004556)	NEU4 (ENSSCUG00000004559)	TM4SF19 (ENSSCUG00000004560)	UBXN7 (ENSSCUG00000004563)	RNF168 (ENSSCUG00000004567)	WDR53 (ENSSCUG00000004570)	FBXO45 (ENSSCUG00000004571)	NRROS (ENSSCUG00000004575)	CEP19 (ENSSCUG00000004579)	PIGX (ENSSCUG00000004583)	PAK2 (ENSSCUG00000004586)	ENSSCUG00000004592 #22	ENSSCUG00000004596	LTF (ENSSCUG00000004607)	ENSSCUG00000004618	RAB6B (ENSSCUG00000004621)	SLCO2A1 (ENSSCUG00000004629)	RYK (ENSSCUG00000004635)
Australian saltwater crocodile	MODERN SPECIES	48	ENSCPRG00005009571	ING5 (ENSCPRG00005009567)	D2HGDH (ENSCPRG00005009564)	GAL3ST2 (ENSCPRG00005009561)	NEU4 (ENSCPRG00005009553)	TM4SF19 (ENSCPRG00005009550)	UBXN7 (ENSCPRG00005009545)	RNF168 (ENSCPRG00005009543)	SMCO1 (ENSCPRG00005009542)	WDR53 (ENSCPRG00005009540)	FBXO45 (ENSCPRG00005009539)	NRROS (ENSCPRG00005009536)	CEP19 (ENSCPRG00005009535)	PIGX (ENSCPRG00005009530)	PAK2 (ENSCPRG00005009523)	ENSCPRG00005009514 #22	ENSCPRG00005009505	LTF (ENSCPRG00005009494)	RAB6B (ENSCPRG00005009489)	SLCO2A1 (ENSCPRG00005009488)	RYK (ENSCPRG00005009423)	AMOTL2 (ENSCPRG00005009395)	ENSCPRG00005009385	SOX14 (ENSCPRG00005009382)	CLDN18 (ENSCPRG00005009372)	DZIP1L (ENSCPRG00005009363)	A4GNT (ENSCPRG00005009360)	ENSCPRG00005009353	EPHB1 (ENSCPRG00005009314)	KY (ENSCPRG00005009305)	CEP63 (ENSCPRG00005009297)
Cryptodira	ANCESTRAL SPECIES	37	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297	ENSGT00510000047981.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342	ENSGT00470000042284
Testudinoidea	ANCESTRAL SPECIES	9	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297.b	ENSGT00510000047981.d.c	ENSGT00510000047981.d.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342
Emydidae	ANCESTRAL SPECIES	3	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297.a	ENSGT00510000047981.d.c	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342	ENSGT00470000042284
Three-toed box turtle	MODERN SPECIES	384	ING5 (ENSTMTG00000010268)	D2HGDH (ENSTMTG00000010256)	GAL3ST2 (ENSTMTG00000010235)	NEU4 (ENSTMTG00000010165)	TM4SF19 (ENSTMTG00000010116)	UBXN7 (ENSTMTG00000010094)	RNF168 (ENSTMTG00000010072)	SMCO1 (ENSTMTG00000010057)	WDR53 (ENSTMTG00000010043)	FBXO45 (ENSTMTG00000010034)	NRROS (ENSTMTG00000010021)	CEP19 (ENSTMTG00000010000)	PIGX (ENSTMTG00000009980)	ENSTMTG00000009964	PAK2 (ENSTMTG00000009932)	ENSTMTG00000009894 #22	ENSTMTG00000009866	LTF (ENSTMTG00000009816)	ENSTMTG00000009795	RAB6B (ENSTMTG00000009730)	SLCO2A1 (ENSTMTG00000009687)	RYK (ENSTMTG00000009649)	AMOTL2 (ENSTMTG00000009622)	ANAPC13 (ENSTMTG00000009606)	CEP63 (ENSTMTG00000009556)	KY (ENSTMTG00000009505)	EPHB1 (ENSTMTG00000009435)	ENSTMTG00000009424	ENSTMTG00000009413	ENSTMTG00000009397	CLDN18 (ENSTMTG00000009380)
painted turtle	MODERN SPECIES	776				NEU4 (ENSCPBG00000021359)	TM4SF19 (ENSCPBG00000021361)	ENSCPBG00000021362	RNF168 (ENSCPBG00000021369)	SMCO1 (ENSCPBG00000021372)	WDR53 (ENSCPBG00000021373)	FBXO45 (ENSCPBG00000021375)	NRROS (ENSCPBG00000021377)	ENSCPBG00000021379	CEP19 (ENSCPBG00000021380)	PIGX (ENSCPBG00000021382)	PAK2 (ENSCPBG00000021385)	ENSCPBG00000021392 #22	ENSCPBG00000021396	LTF (ENSCPBG00000021401)	ENSCPBG00000021403	RAB6B (ENSCPBG00000021406)	SLCO2A1 (ENSCPBG00000021408)	RYK (ENSCPBG00000000129)	AMOTL2 (ENSCPBG00000000153)	ANAPC13 (ENSCPBG00000000166)	CEP63 (ENSCPBG00000000191)	KY (ENSCPBG00000000215)	EPHB1 (ENSCPBG00000000252)	ENSCPBG00000000310	ENSCPBG00000000416	DZIP1L (ENSCPBG00000000430)	CLDN18 (ENSCPBG00000000452)
Testudinidae	ANCESTRAL SPECIES	7	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887	ENSGT00940000155297.b	ENSGT00510000047981.d.c	ENSGT00510000047981.d.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342
Abingdon island giant tortoise	MODERN SPECIES	178		ENSCABG00000017975	ENSCABG00000017974	ENSCABG00000017971	NEU4 (ENSCABG00000017968)	TM4SF19 (ENSCABG00000017965)	UBXN7 (ENSCABG00000017961)	RNF168 (ENSCABG00000017960)	SMCO1 (ENSCABG00000017959)	WDR53 (ENSCABG00000017958)	FBXO45 (ENSCABG00000017957)	NRROS (ENSCABG00000017956)	CEP19 (ENSCABG00000017955)	PIGX (ENSCABG00000017954)	PAK2 (ENSCABG00000017952)	ENSCABG00000017949 #22	ENSCABG00000017945
Goode s thornscrub tortoise	MODERN SPECIES	23	DTYMK (ENSGEVG00005020241)	ING5 (ENSGEVG00005020237)	D2HGDH (ENSGEVG00005020232)	GAL3ST2 (ENSGEVG00005020227)	NEU4 (ENSGEVG00005020219)	TM4SF19 (ENSGEVG00005020212)	UBXN7 (ENSGEVG00005020209)	RNF168 (ENSGEVG00005020205)	SMCO1 (ENSGEVG00005020202)	WDR53 (ENSGEVG00005020198)	FBXO45 (ENSGEVG00005020196)	NRROS (ENSGEVG00005020191)	CEP19 (ENSGEVG00005020190)	PIGX (ENSGEVG00005020188)	PAK2 (ENSGEVG00005020183)	ENSGEVG00005020177 #22	ENSGEVG00005020172	LTF (ENSGEVG00005020162)	ENSGEVG00005020152	RAB6B (ENSGEVG00005020143)	SLCO2A1 (ENSGEVG00005020130)	RYK (ENSGEVG00005020113)	AMOTL2 (ENSGEVG00005020094)	ANAPC13 (ENSGEVG00005020086)	CEP63 (ENSGEVG00005020081)	KY (ENSGEVG00005020073)	EPHB1 (ENSGEVG00005020062)	ENSGEVG00005020057	ENSGEVG00005020053	ENSGEVG00005020044	CLDN18 (ENSGEVG00005020040)
Chinese turtle	MODERN SPECIES	1201							UBXN7 (ENSPSIG00000015941)	RNF168 (ENSPSIG00000015970)	SMCO1 (ENSPSIG00000016002)	WDR53 (ENSPSIG00000016167)	FBXO45 (ENSPSIG00000016329)	NRROS (ENSPSIG00000016962)	CEP19 (ENSPSIG00000016993)	PIGX (ENSPSIG00000005783)	PAK2 (ENSPSIG00000005829)	ENSPSIG00000007765 #22	ENSPSIG00000007791	LTF (ENSPSIG00000007885)	ENSPSIG00000016345	RAB6B (ENSPSIG00000016349)	SLCO2A1 (ENSPSIG00000016377)	RYK (ENSPSIG00000017005)
Lepidosauria	ANCESTRAL SPECIES	48	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887.c	ENSGT00940000155297	ENSGT00510000047981.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342	ENSGT00470000042284
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887.c	ENSGT00940000155297	ENSGT00510000047981.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342	ENSGT00470000042284
Laterata	ANCESTRAL SPECIES		ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887.c	ENSGT00940000155297	ENSGT00510000047981.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342	ENSGT00470000042284
Common wall lizard	MODERN SPECIES	13	ENSPMRG00000014974	ENSPMRG00000014971	ING5 (ENSPMRG00000014968)	D2HGDH (ENSPMRG00000014960)	NEU4 (ENSPMRG00000014942)	TM4SF19 (ENSPMRG00000014930)	UBXN7 (ENSPMRG00000014921)	RNF168 (ENSPMRG00000014916)	SMCO1 (ENSPMRG00000014912)	WDR53 (ENSPMRG00000014908)	FBXO45 (ENSPMRG00000014905)	NRROS (ENSPMRG00000014901)	CEP19 (ENSPMRG00000014897)	PIGX (ENSPMRG00000014891)	PAK2 (ENSPMRG00000014879)	ENSPMRG00000014864 #22	ENSPMRG00000014857	ENSPMRG00000014851	RAB6B (ENSPMRG00000014846)	SLCO2A1 (ENSPMRG00000014834)	LTF (ENSPMRG00000014815)	RYK (ENSPMRG00000014787)	AMOTL2 (ENSPMRG00000014778)	ANAPC13 (ENSPMRG00000014769)	CEP63 (ENSPMRG00000014758)	ENSPMRG00000014746	ENSPMRG00000014735	ENSPMRG00000014675	A4GNT (ENSPMRG00000014668)	ENSPMRG00000014656	CLDN18 (ENSPMRG00000014647)
Argentine black and white tegu	MODERN SPECIES	19	DTYMK (ENSSMRG00000000297)	ING5 (ENSSMRG00000000278)	D2HGDH (ENSSMRG00000000238)	GAL3ST2 (ENSSMRG00000000236)	NEU4 (ENSSMRG00000000142)	TM4SF19 (ENSSMRG00000000072)	UBXN7 (ENSSMRG00000000052)	ENSSMRG00000000036	SMCO1 (ENSSMRG00000022211)	WDR53 (ENSSMRG00000022210)	FBXO45 (ENSSMRG00000022209)	NRROS (ENSSMRG00000022208)	PIGX (ENSSMRG00000022207)	CEP19 (ENSSMRG00000022206)	PAK2 (ENSSMRG00000022166)	ENSSMRG00000022165 #22	ENSSMRG00000022164	ENSSMRG00000022162	ENSSMRG00000022160	RAB6B (ENSSMRG00000022158)	SLCO2A1 (ENSSMRG00000022155)	RYK (ENSSMRG00000022153)	AMOTL2 (ENSSMRG00000022151)	ANAPC13 (ENSSMRG00000022149)	CEP63 (ENSSMRG00000022148)	ENSSMRG00000022146	ENSSMRG00000022144	EPHB1 (ENSSMRG00000022143)	A4GNT (ENSSMRG00000022139)	DZIP1L (ENSSMRG00000022138)	CLDN18 (ENSSMRG00000022137)
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887.c	ENSGT00940000155297	ENSGT00510000047981.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342	ENSGT00470000042284
Elapidae	ANCESTRAL SPECIES	4	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887.c	ENSGT00940000155297	ENSGT00510000047981.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342	ENSGT00470000042284
Elapidae_a	ANCESTRAL SPECIES		ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887.c	ENSGT00940000155297	ENSGT00510000047981.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342	ENSGT00470000042284
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00940000154030.a.a	ENSGT00940000158159	ENSGT00550000075086	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a.a.a	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00940000156055	ENSGT00940000159656	ENSGT01080000257336.a.c.b	ENSGT00940000155119	ENSGT00940000156577	ENSGT00390000008673	ENSGT00940000153190.B.b	ENSGT00390000002887.c	ENSGT00940000155297	ENSGT00510000047981.d	ENSGT00940000160898	ENSGT00940000158655	ENSGT00940000160749.b	ENSGT00940000160342	ENSGT00470000042284
Mainland tiger snake	MODERN SPECIES		ENSNSUG00000013506	ING5 (ENSNSUG00000013504)	D2HGDH (ENSNSUG00000013503)	GAL3ST2 (ENSNSUG00000013502)	NEU4 (ENSNSUG00000013501)	TM4SF19 (ENSNSUG00000013500)	UBXN7 (ENSNSUG00000013499)	RNF168 (ENSNSUG00000013498)	SMCO1 (ENSNSUG00000013497)	WDR53 (ENSNSUG00000013496)	FBXO45 (ENSNSUG00000013495)	NRROS (ENSNSUG00000013494)	CEP19 (ENSNSUG00000013493)	ENSNSUG00000013492	PAK2 (ENSNSUG00000013491)	ENSNSUG00000013490 #22	ENSNSUG00000013489	ENSNSUG00000013463	RAB6B (ENSNSUG00000013437)	SLCO2A1 (ENSNSUG00000013436)	RYK (ENSNSUG00000013435)	AMOTL2 (ENSNSUG00000013434)	ANAPC13 (ENSNSUG00000013433)	ENSNSUG00000013432	KY (ENSNSUG00000013431)	ENSNSUG00000013430	ENSNSUG00000013428	A4GNT (ENSNSUG00000013427)	ENSNSUG00000013425	CLDN18 (ENSNSUG00000013423)	SOX14 (ENSNSUG00000013421)
Eastern brown snake	MODERN SPECIES	16	DTYMK (ENSPTXG00000000491)	ING5 (ENSPTXG00000000486)	D2HGDH (ENSPTXG00000000475)	GAL3ST2 (ENSPTXG00000000466)	NEU4 (ENSPTXG00000000312)	TM4SF19 (ENSPTXG00000000257)	UBXN7 (ENSPTXG00000000241)	RNF168 (ENSPTXG00000000224)	SMCO1 (ENSPTXG00000000202)	WDR53 (ENSPTXG00000000195)	FBXO45 (ENSPTXG00000000184)	NRROS (ENSPTXG00000000174)	CEP19 (ENSPTXG00000000167)	PIGX (ENSPTXG00000000151)	PAK2 (ENSPTXG00000000079)	ENSPTXG00000018859 #22	ENSPTXG00000018858	ENSPTXG00000018857	RAB6B (ENSPTXG00000018856)	SLCO2A1 (ENSPTXG00000018855)	RYK (ENSPTXG00000018853)	AMOTL2 (ENSPTXG00000018852)	ANAPC13 (ENSPTXG00000018851)	ENSPTXG00000018850	CEP63 (ENSPTXG00000018849)	KY (ENSPTXG00000018848)	EPHB1 (ENSPTXG00000018847)	A4GNT (ENSPTXG00000018844)	ENSPTXG00000018842	CLDN18 (ENSPTXG00000018840)	SOX14 (ENSPTXG00000018839)
Blue-lipped sea krait	MODERN SPECIES	3080															PAK2 (ENSLLTG00000003033)	ENSLLTG00000003042 #22
Indian cobra	MODERN SPECIES	3	ING5 (ENSNNAG00000012325)	D2HGDH (ENSNNAG00000012317)	GAL3ST2 (ENSNNAG00000012292)	ENSNNAG00000012274	NEU4 (ENSNNAG00000012189)	ENSNNAG00000012163	UBXN7 (ENSNNAG00000012127)	RNF168 (ENSNNAG00000012102)	SMCO1 (ENSNNAG00000012090)	WDR53 (ENSNNAG00000012077)	FBXO45 (ENSNNAG00000012043)	NRROS (ENSNNAG00000012031)	CEP19 (ENSNNAG00000012014)	PIGX (ENSNNAG00000011997)	PAK2 (ENSNNAG00000011945)	ENSNNAG00000011924 #22	LTF (ENSNNAG00000011035)	ENSNNAG00000010962	RAB6B (ENSNNAG00000010945)	SLCO2A1 (ENSNNAG00000010869)	RYK (ENSNNAG00000010694)	AMOTL2 (ENSNNAG00000010601)	ANAPC13 (ENSNNAG00000010581)	CEP63 (ENSNNAG00000010519)	ENSNNAG00000010479	EPHB1 (ENSNNAG00000009873)	A4GNT (ENSNNAG00000009808)	ENSNNAG00000009734	CLDN18 (ENSNNAG00000009692)	SOX14 (ENSNNAG00000009676)	CRYGS (ENSNNAG00000009639)
Lizard	MODERN SPECIES	2	DTYMK (ENSACAG00000000739)	ING5 (ENSACAG00000000665)	D2HGDH (ENSACAG00000000533)	GAL3ST2 (ENSACAG00000000492)	neu4 (ENSACAG00000000446)	TM4SF19 (ENSACAG00000000433)	UBXN7 (ENSACAG00000016312)	RNF168 (ENSACAG00000034899)	ENSACAG00000037121	WDR53 (ENSACAG00000016299)	FBXO45 (ENSACAG00000016292)	ENSACAG00000016291	CEP19 (ENSACAG00000016288)	PIGX (ENSACAG00000029652)	ENSACAG00000016263	ENSACAG00000016251 #22	ENSACAG00000016246	ENSACAG00000029241	ENSACAG00000009938	ENSACAG00000041567	ENSACAG00000042817	RAB6B (ENSACAG00000039997)	SLCO2A1 (ENSACAG00000009749)	RYK (ENSACAG00000009662)	ENSACAG00000036504	AMOTL2 (ENSACAG00000009605)	ENSACAG00000045173	ANAPC13 (ENSACAG00000043386)	CEP63 (ENSACAG00000009577)	ENSACAG00000009558	EPHB1 (ENSACAG00000009241)
Anura	ANCESTRAL SPECIES	114	ENSGT00940000155297	ENSGT00390000002887.h.a	ENSGT00390000002887.g	ENSGT00940000153190.B.b	ENSGT00940000156577	ENSGT00940000155119	ENSGT01080000257336.a.c.b	ENSGT00940000159656	ENSGT00940000156055	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00530000063816.d #22	ENSGT00950000182923.B.a	ENSGT00950000182944.B.a	ENSGT01030000234590.A.a.a	ENSGT00390000018687	ENSGT00940000153680.a
Frog	MODERN SPECIES	5	cep63 (ENSXETG00000032680)	amotl2 (ENSXETG00000011819)	megs (ENSXETG00000031854)	ryk (ENSXETG00000011818)	slco2a1 (ENSXETG00000011817)	rab6b (ENSXETG00000031363)	srprb (ENSXETG00000037435)	tf (ENSXETG00000011814)	ENSXETG00000041172	ENSXETG00000011813	ENSXETG00000045549	wdr53 (ENSXETG00000037635)	fbxo45 (ENSXETG00000040149)	nrros (ENSXETG00000032133)	pak2 (ENSXETG00000011808)	aqp12a (ENSXETG00000033558) #22	ENSXETG00000035170	ENSXETG00000032419	gal3st2 (ENSXETG00000015660)	neu4 (ENSXETG00000003122)	TM4SF19 (ENSXETG00000037144)	ubxn7 (ENSXETG00000003125)	rnf168 (ENSXETG00000003128)	gk5 (ENSXETG00000023572)	tfdp2 (ENSXETG00000014750)	atp1b3 (ENSXETG00000014751)	grk7 (ENSXETG00000014752)	rnf7 (ENSXETG00000014753)	ENSXETG00000030812	rasa2 (ENSXETG00000014755)	zbtb38 (ENSXETG00000014756)
Leishan spiny toad	MODERN SPECIES	7	AMOTL2 (ENSLLEG00000008388)	RYK (ENSLLEG00000008479)	ENSLLEG00000009102	SLCO2A1 (ENSLLEG00000009122)	RAB6B (ENSLLEG00000009354)	ENSLLEG00000009490	ENSLLEG00000009603	ENSLLEG00000009994	ENSLLEG00000010014	ENSLLEG00000010031	NRROS (ENSLLEG00000010049)	CEP19 (ENSLLEG00000010092)	PIGX (ENSLLEG00000010176)	ENSLLEG00000010318	PAK2 (ENSLLEG00000010354)	ENSLLEG00000010515 #22	ENSLLEG00000010537	ENSLLEG00000010562	ENSLLEG00000010572	ENSLLEG00000010607	ENSLLEG00000010634	NEU4 (ENSLLEG00000010728)	GK5 (ENSLLEG00000011475)	TFDP2 (ENSLLEG00000011769)	ENSLLEG00000012028	ATP1B3 (ENSLLEG00000012052)	GRK7 (ENSLLEG00000012216)	RNF7 (ENSLLEG00000012275)	ENSLLEG00000012376	RASA2 (ENSLLEG00000012570)	ZBTB38 (ENSLLEG00000012712)
Coelacanth	MODERN SPECIES	2237												ENSLACG00000002947	CEP19 (ENSLACG00000003438)	PIGX (ENSLACG00000003687)	PAK2 (ENSLACG00000004190)	aqp12 (ENSLACG00000022453) #22	NRROS (ENSLACG00000007396)
Actinopterygii	ANCESTRAL SPECIES	513											ENSGT00550000075086	ENSGT00940000158159	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a.b	ENSGT00530000063816.d #22
Neopterygii	ANCESTRAL SPECIES	68	ENSGT00390000012141.a	ENSGT00390000004940.a.a	ENSGT00940000164140	ENSGT00390000013904	ENSGT00940000157096	ENSGT00940000157155	ENSGT00940000157183.b	ENSGT00940000159794	ENSGT00940000160041	ENSGT00940000166623	ENSGT00940000154694	ENSGT00940000159706 #19	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b #15	ENSGT01050000244955.b	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00390000013989.a	ENSGT00950000183071.a.a.b	ENSGT00390000004600.b.a	ENSGT00940000165265	ENSGT00990000208723	ENSGT01030000235347	ENSGT01080000257487
Osteoglossocephalai	ANCESTRAL SPECIES	321												ENSGT00940000155297.hb.b	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b #15	ENSGT01050000244955.b.c	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00950000183071.a.a.b.d.a
Osteoglossiformes	ANCESTRAL SPECIES	380														ENSGT01050000244897.a.a.b.b #15	ENSGT01050000244955.b.c.e	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b.o.a	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00950000183071.a.a.b.d.a	ENSGT00940000165265.c	ENSGT00990000208723
Asian bonytongue	MODERN SPECIES	10	CDH10 (ENSSFOG00015009629)	CDH12 (ENSSFOG00015009490)	CDH18 (ENSSFOG00015009460)	ENSSFOG00015009432	ENSSFOG00015028157	snx16 (ENSSFOG00015009381)	ENSSFOG00015009369	WWP1 (ENSSFOG00015009274)	rmdn1 (ENSSFOG00015009243)	cpne3 (ENSSFOG00015009203)	ENSSFOG00015009130	ENSSFOG00015009011	MMP16 (ENSSFOG00015008940)	gpc1a (ENSSFOG00015031782) #15	gpc5b (ENSSFOG00015025278)	aqp12 (ENSSFOG00015032336) #22	rpp21 (ENSSFOG00015008742)	ENSSFOG00015029866	pak2b (ENSSFOG00015008688)	pigx (ENSSFOG00015008661)	cep19 (ENSSFOG00015008612)	ing5a (ENSSFOG00015032338)	plekhb2 (ENSSFOG00015028146)	HS6ST1 (ENSSFOG00015028994)	ek1 (ENSSFOG00015008441)	ENSSFOG00015030608	and1 (ENSSFOG00015024719)	adipoqa (ENSSFOG00015026354)	ENSSFOG00015008341	ENSSFOG00015008297	tfr1b (ENSSFOG00015008261)
P. kingsleyae	MODERN SPECIES	466							cpne3 (ENSPKIG00000002606)	ENSPKIG00000002574	ENSPKIG00000002541	ENSPKIG00000002523	ENSPKIG00000002504	ENSPKIG00000002488	gpc1a (ENSPKIG00000002473) #15	gpc5b (ENSPKIG00000002441)	ENSPKIG00000002427	aqp12 (ENSPKIG00000002404) #22	rpp21 (ENSPKIG00000002378)
Clupeocephala	ANCESTRAL SPECIES	268												ENSGT00940000155297.hb.b	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b #15	ENSGT01050000244955.b.c	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00950000182917.b.a.b	ENSGT00990000204641.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571
Otomorpha	ANCESTRAL SPECIES	223	ENSGT01000000214413.b.a.a.r	ENSGT00940000156305	ENSGT00390000002837	ENSGT00390000009980	ENSGT00940000157401	ENSGT00940000155931.a	ENSGT00390000000263	ENSGT00950000183070.a.a.mb.b.h	ENSGT00980000198724	ENSGT00940000164867.b	ENSGT00940000159265	ENSGT00390000003197	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b #15	ENSGT01050000244955.b.c	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00950000182917.b.a.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000162118	ENSGT00940000163206.b.a.a
Clupeiformes	ANCESTRAL SPECIES	220	ENSGT00390000013727.d.a	ENSGT01000000214413.b.a.a.r	ENSGT00940000156305	ENSGT00390000002837	ENSGT00390000009980	ENSGT00940000157401	ENSGT00940000155931.a	ENSGT00390000000263	ENSGT00950000183070.a.a.mb.b.h	ENSGT00940000164867.b	ENSGT00940000159265	ENSGT00390000003197	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b #15	ENSGT01050000244955.b.c	ENSGT00530000063816.d #22	ENSGT00390000003020
Denticle herring	MODERN SPECIES	307											MELTF (ENSDCDG00000025686)	ncbp2 (ENSDCDG00000025690)	ANKMY1 (ENSDCDG00000025699) #16	gpc1a (ENSDCDG00000025710) #15	gpc5b (ENSDCDG00000025717)	aqp12 (ENSDCDG00000025736) #22	rpp21 (ENSDCDG00000025804)	P2RY14 (ENSDCDG00000025806)	ENSDCDG00000025807	rnf168 (ENSDCDG00000025808)	GAB2 (ENSDCDG00000025809)	nars2 (ENSDCDG00000025816)	tenm4 (ENSDCDG00000025939)
Atlantic herring	MODERN SPECIES	1	senp5 (ENSCHAG00000025280)	s1pr1 (ENSCHAG00000025282)	GNB4 (ENSCHAG00000025285)	actl6a (ENSCHAG00000025293)	mrpl47 (ENSCHAG00000025322)	ndufb5 (ENSCHAG00000025329)	usp13 (ENSCHAG00000025342)	PEX5L (ENSCHAG00000025465)	pde6d (ENSCHAG00000025623)	phb2b (ENSCHAG00000025632)	ENSCHAG00000025637	dlg1a (ENSCHAG00000025768)	ENSCHAG00000027115	ncbp2 (ENSCHAG00000027135)	ENSCHAG00000027138 #16	aqp12 (ENSCHAG00000027140) #22	ENSCHAG00000027145	PCSK9 (ENSCHAG00000027148)	USP24 (ENSCHAG00000027166)	bloc1s2 (ENSCHAG00000027246)	ENSCHAG00000027252	PLPP3 (ENSCHAG00000027263)	PRKAA2 (ENSCHAG00000027279)	dab1a (ENSCHAG00000027288)	OMA1 (ENSCHAG00000027297)	mysm1 (ENSCHAG00000027300)	PRRX1 (ENSCHAG00000027306)	ENSCHAG00000027309	rnf2 (ENSCHAG00000027312)	ENSCHAG00000027315	ENSCHAG00000027319
Otophysi	ANCESTRAL SPECIES	3	ENSGT00390000007310	ENSGT00940000155438.b	ENSGT00940000164495.c.b	ENSGT00390000013811	ENSGT00390000001201	ENSGT00390000018044.b.b	ENSGT00940000155916	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000161678	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b #15	ENSGT01050000244955.b.c	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000017571	ENSGT00940000162118	ENSGT00940000163206.b.a.a	ENSGT00940000160274	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00550000075004	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00940000165115.a	ENSGT00390000003420.b
Characiphysae	ANCESTRAL SPECIES	28	ENSGT00390000007310	ENSGT00940000155438.b	ENSGT00940000164495.c.b	ENSGT00390000013811	ENSGT00390000001201	ENSGT00390000018044.b.b	ENSGT00940000155916	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000161678	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b #15	ENSGT01050000244955.b.c	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000017571	ENSGT00940000162118	ENSGT00940000163206.b.a.a	ENSGT00940000160274	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00550000075004	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00940000165115.a	ENSGT00390000003420.b
Channel catfish	MODERN SPECIES	1	eps15l1 (ENSIPUG00000024839)	Klf2 (ENSIPUG00000024844)	fam32a (ENSIPUG00000024852)	mrpl54 (ENSIPUG00000024854)	malt2 (ENSIPUG00000024856)	safb2 (ENSIPUG00000024869)	ENSIPUG00000024876	lpl (ENSIPUG00000024879)	tpm4 (ENSIPUG00000024888)	ENSIPUG00000024898	hsh2d (ENSIPUG00000024899)	ankmy1 (ENSIPUG00000024900) #16	gpc1 (ENSIPUG00000024906) #15	gpc5b (ENSIPUG00000024908)	rpp21 (ENSIPUG00000024910)	Aqp12 (ENSIPUG00000024912) #22	PAK2 (ENSIPUG00000024915)	pigx (ENSIPUG00000024918)	cep19 (ENSIPUG00000024921)	Ing5 (ENSIPUG00000024919)	impact-B (ENSIPUG00000024923)	hrh4 (ENSIPUG00000024928)	lmnb2 (ENSIPUG00000024929)	ENSIPUG00000024932	rpl36 (ENSIPUG00000024935)	LONP1 (ENSIPUG00000024938)	ftsj3 (ENSIPUG00000024942)	LIM2 (ENSIPUG00000024943)	ENSIPUG00000024945	Gipc3 (ENSIPUG00000024947)	TBXA2R (ENSIPUG00000024950)
Characiphysae_b	ANCESTRAL SPECIES	25	ENSGT00390000007310	ENSGT00940000155438.b	ENSGT00940000164495.c.b	ENSGT00390000013811	ENSGT00390000001201	ENSGT00390000018044.b.b	ENSGT00940000155916	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000161678	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b #15	ENSGT01050000244955.b.c	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000017571	ENSGT00940000162118	ENSGT00940000163206.b.a.a	ENSGT00940000160274	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00550000075004	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00940000165115.a	ENSGT00390000003420.b
Characoidei	ANCESTRAL SPECIES	26	ENSGT00390000007310	ENSGT00940000155438.b	ENSGT00940000164495.c.b	ENSGT00390000013811	ENSGT00390000001201	ENSGT00390000018044.b.b	ENSGT00940000155916	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000161678	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b #15	ENSGT01050000244955.b.c	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT00940000160274	ENSGT00390000011943.b	ENSGT00530000063553.b.a	ENSGT00550000075004	ENSGT01050000244814.a.a.b.b.b.a.b	ENSGT00940000165115.a	ENSGT00390000003420.b	ENSGT01030000234559.a.a.a
Red-bellied piranha	MODERN SPECIES	27	ENSPNAG00000021513	ap4b1 (ENSPNAG00000021523)	BLTP3A (ENSPNAG00000021546)	taf11 (ENSPNAG00000021557)	ANKS1A (ENSPNAG00000021680)	safb (ENSPNAG00000021838)	ENSPNAG00000021890	ENSPNAG00000021936	lpl (ENSPNAG00000021960)	tpm4a (ENSPNAG00000022014)	hsh2d (ENSPNAG00000022029)	ENSPNAG00000022049 #16	gpc1a (ENSPNAG00000022074) #15	gpc5b (ENSPNAG00000022094)	ENSPNAG00000022124	aqp12 (ENSPNAG00000022146) #22	rpp21 (ENSPNAG00000022186)	pak2b (ENSPNAG00000022217)	pigx (ENSPNAG00000022229)	cep19 (ENSPNAG00000022237)	ing5a (ENSPNAG00000022278)	impact (ENSPNAG00000022290)	ENSPNAG00000022302	lmnb2 (ENSPNAG00000022321)	rpl36 (ENSPNAG00000022340)	LONP1 (ENSPNAG00000022460)	ftsj3 (ENSPNAG00000022474)	lim2.2 (ENSPNAG00000022501)	ENSPNAG00000022535	gipc3 (ENSPNAG00000022570)	tbxa2r (ENSPNAG00000005337)
Mexicana tetra	MODERN SPECIES	20	gatad2ab (ENSAMXG00000035363)	yjefn3 (ENSAMXG00000015707)	CILP2 (ENSAMXG00000015685)	ENSAMXG00000015658	cirbpb (ENSAMXG00000015612)	midn (ENSAMXG00000015589)	atp5f1d (ENSAMXG00000015570)	CBARP (ENSAMXG00000033145)	fstl3 (ENSAMXG00000037779)	tpm4a (ENSAMXG00000036267)	hsh2d (ENSAMXG00000040655)	ENSAMXG00000015434 #16	gpc1a (ENSAMXG00000015392) #15	gpc5b (ENSAMXG00000015368)	ENSAMXG00000036406	aqp12 (ENSAMXG00000032995) #22	rlbp1a (ENSAMXG00000038590)	slc39a1 (ENSAMXG00000036608)	ENSAMXG00000015268	furina (ENSAMXG00000034473)	fes (ENSAMXG00000015161)	rhcga (ENSAMXG00000015098)	rhcga (ENSAMXG00000035292)	psmd14 (ENSAMXG00000002142)	RBMS1 (ENSAMXG00000002146)	ENSAMXG00000033689	ITGB6 (ENSAMXG00000039846)	PLA2R1 (ENSAMXG00000002156)	LY75 (ENSAMXG00000002159)	myom2a (ENSAMXG00000002164)	lgsn (ENSAMXG00000002166)
Electric eel	MODERN SPECIES	89	stil (ENSEEEG00000015467)	EPS15L1 (ENSEEEG00000015471)	klf2a (ENSEEEG00000015692)	fam32a (ENSEEEG00000015694)	mrpl54 (ENSEEEG00000015695)	malt2 (ENSEEEG00000015696)	safb (ENSEEEG00000015699)	ENSEEEG00000015705	ENSEEEG00000015721	lpl (ENSEEEG00000015950)	tpm4a (ENSEEEG00000016378)	hsh2d (ENSEEEG00000016589)	ENSEEEG00000016596 #16	gpc1a (ENSEEEG00000016602) #15	gpc5b (ENSEEEG00000016604)	aqp12 (ENSEEEG00000016608) #22	rpp21 (ENSEEEG00000016609)	PIP5K1C (ENSEEEG00000016611)	ENSEEEG00000016614	marchf2 (ENSEEEG00000016647)	hnrnpm (ENSEEEG00000016654)	ifi44f5 (ENSEEEG00000016708)	RABGAP1L (ENSEEEG00000016729)	FAM163A (ENSEEEG00000016965)	ENSEEEG00000016967	nphs2 (ENSEEEG00000016969)	axdnd1 (ENSEEEG00000016970)	nrd1b (ENSEEEG00000016978)	ENSEEEG00000017124	atpaf1 (ENSEEEG00000017125)	frem1b (ENSEEEG00000017127)
Cyprinoidei	ANCESTRAL SPECIES	209						ENSGT01030000234557.A.f.h.b.a.b	ENSGT00830000128446.a.d.i.a.a.a.a.a.a	ENSGT01030000234898.a.a.a	ENSGT01030000234557.A.f.i.b.a.b	ENSGT01030000235051.b	ENSGT01030000234557.A.f.h.b.b.a	ENSGT00940000158159	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a.b	ENSGT00530000063816.d #22
Cyprininae	ANCESTRAL SPECIES	91		ENSGT01100000263531.G.r.a.a.a.b.a	ENSGT00940000153617.A.a.a.e.a	ENSGT01030000234559.a.a.a.a	ENSGT00390000003420.b.c	ENSGT00940000165115.a.c	ENSGT01040000240444.A.b.a.b.i.a #20	ENSGT01050000244814.a.a.b.b.b.a.b.f	ENSGT00530000063553.b.a.f	ENSGT00390000011943.a.a	ENSGT00390000011943.b.s	ENSGT00940000160274.l.a	ENSGT00940000163206.b.a.a.b	ENSGT00940000158159.i.b	ENSGT00950000182988.a.a.b.k	ENSGT00530000063816.d #22	ENSGT01050000244806.b.a.b.c.a.a.a.a.a.a.b.a.b.a.b.a.a.a.a	ENSGT00950000183011.d.d.a	ENSGT00940000157451.r	ENSGT00940000171293.a.a	ENSGT00940000156872.d.b	ENSGT00940000154102.a.g.b	ENSGT00530000063722.a.eb	ENSGT00940000156676.c	ENSGT00950000183017.b.b.a.b.b.b	ENSGT00940000163864	ENSGT00940000158289.a.a.a.a	ENSGT00390000007975.b.a	ENSGT00940000153544.a.i.a.b	ENSGT00950000183117.a.b.b.a.a	ENSGT01030000234578.B.b.b.a
Cyprininae_a	DUPLICATION
Cyprininae_a	ANCESTRAL SPECIES	352			ENSGT01100000263531.G.r.a.a.a.b.a	ENSGT00940000153617.A.a.a.e.a	ENSGT01030000234559.a.a.a.a	ENSGT00390000003420.b.c	ENSGT00940000165115.a.c	ENSGT01040000240444.A.b.a.b.i.a.a #20	ENSGT01050000244814.a.a.b.b.b.a.b.f	ENSGT00530000063553.b.a.f	ENSGT00390000011943.a.a	ENSGT00940000160274.l.a	ENSGT00940000163206.b.a.a.b	ENSGT00940000158159.i.b	ENSGT00950000182988.a.a.b.k	ENSGT00530000063816.d.k #22	ENSGT01050000244806.b.a.b.c.a.a.a.a.a.a.b.a.b.a.b.a.a.a.a	ENSGT00950000183011.d.d.a	ENSGT00940000157451.r	ENSGT00940000160607.b	ENSGT00940000156872.d.b	ENSGT00940000156676.c.d	ENSGT00950000183017.b.b.a.b.b.b	ENSGT00940000163864	ENSGT00940000153544.a.i.a.b	ENSGT00950000183117.a.b.b.a.a	ENSGT00950000183117.a.b.b.a.b	ENSGT00950000182931.A.a.a.a	ENSGT00390000013899.a.b	ENSGT00940000165925.c.a.a.a	ENSGT00950000183062.a.b.a.c
Golden-line barbel	MODERN SPECIES	259															pak2b (ENSSGRG00000033029)	aqp12 (ENSSGRG00000033369) #22	ENSSGRG00000033370	AMPD2 (ENSSGRG00000033371)	ENSSGRG00000033373	irf6 (ENSSGRG00000033374)	ENSSGRG00000033376	ENSSGRG00000033377	fam49a (ENSSGRG00000033378)	fbxo16 (ENSSGRG00000033389)	fzd3a (ENSSGRG00000033390)	cdc42bpab (ENSSGRG00000033401)	lft1 (ENSSGRG00000034692)	hnrnpub (ENSSGRG00000034693)	cnstb (ENSSGRG00000034694)	sccpdhb (ENSSGRG00000034695)	cnstb (ENSSGRG00000034696)
Common carp reference	MODERN SPECIES	43	ENSCCRG00000079558	ENSCCRG00000012380	ENSCCRG00000030978	ENSCCRG00000056764	gipc3 (ENSCCRG00000052769)	ENSCCRG00000022940	ENSCCRG00000015565 #20	ENSCCRG00000077795 #20	lim2.2 (ENSCCRG00000076380)	ENSCCRG00000022957	ENSCCRG00000022963	lmnb2 (ENSCCRG00000023056)	ENSCCRG00000081539	ing5a (ENSCCRG00000070227)	ENSCCRG00000015144	ENSCCRG00000027197 #22	ENSCCRG00000076543	ENSCCRG00000056016	ENSCCRG00000056897	ENSCCRG00000054257	ENSCCRG00000035872	ENSCCRG00000012526	ENSCCRG00000012511	ENSCCRG00000012499	ENSCCRG00000078730	ENSCCRG00000027230	ENSCCRG00000080464	ENSCCRG00000012577	ENSCCRG00000020852	guca1e (ENSCCRG00000020843)	camk1ga (ENSCCRG00000073188)
Cyprininae_a	ANCESTRAL SPECIES	344	ENSGT00940000165115.a.d	ENSGT01040000240444.A.b.a.b.i.b #20	ENSGT01040000240444.A.b.a.b.i.a.b #20	ENSGT01050000244814.a.a.b.b.b.a.b.e.a	ENSGT00550000075004	ENSGT00530000063553.b.a.e	ENSGT00390000011943.b.r	ENSGT00940000160274.l.b	ENSGT00940000163206.b.a.a.a	ENSGT00390000017571	ENSGT00940000158159.i.a	ENSGT00390000016356	ENSGT00390000017679	ENSGT01030000238410	ENSGT00950000182988.a.a.b.l	ENSGT00530000063816.d.l #22
Golden-line barbel	MODERN SPECIES	2194											ing5a (ENSSGRG00000012794)	ing5a (ENSSGRG00000012780)	cep19 (ENSSGRG00000012779)	ENSSGRG00000012778	pak2b (ENSSGRG00000012777)	aqp12 (ENSSGRG00000012776) #22	ENSSGRG00000012775
Goldfish	MODERN SPECIES	41	ENSCARG00000050737	ENSCARG00000050738	ENSCARG00000050740	PTPRS (ENSCARG00000051067)	ENSCARG00000064915	tbxa2r (ENSCARG00000064917)	gipc3 (ENSCARG00000064925)	ENSCARG00000064974	ENSCARG00000065015 #20	LONP1 (ENSCARG00000065044)	rpl36 (ENSCARG00000065453)	lmnb2 (ENSCARG00000065537)	ENSCARG00000066528	ing5a (ENSCARG00000066654)	pak2b (ENSCARG00000066674)	aqp12 (ENSCARG00000067391) #22	ENSCARG00000067397	ENSCARG00000067404	ENSCARG00000067411	AMPD2 (ENSCARG00000067472)	ENSCARG00000067811	irf6 (ENSCARG00000067827)	GUCA1A (ENSCARG00000067843)	ENSCARG00000067851	ENSCARG00000067861	ENSCARG00000067876	ENSCARG00000067881	ENSCARG00000067888	ENSCARG00000067895	camk1ga (ENSCARG00000067900)	ENSCARG00000067909
Zebrafish	MODERN SPECIES	14	gpr35.1 (ENSDARG00000074633) #20	ENSDARG00000110077	ENSDARG00000100533	ENSDARG00000100132	lim2.2 (ENSDARG00000059015)	ftsj3 (ENSDARG00000104938)	LONP1 (ENSDARG00000102765)	rpl36 (ENSDARG00000100588)	lmnb2 (ENSDARG00000101624)	ENSDARG00000103139	impact (ENSDARG00000043288)	ing5a (ENSDARG00000022413)	cep19 (ENSDARG00000059175)	pigx (ENSDARG00000063559)	pak2b (ENSDARG00000018476)	aqp12 (ENSDARG00000043279) #22	ENSDARG00000071719	ENSDARG00000110106	znf983 (ENSDARG00000071714)	ENSDARG00000092246	ENSDARG00000093562	ENSDARG00000094343	ENSDARG00000092027	ENSDARG00000095455	ENSDARG00000101885	ENSDARG00000022905	ENSDARG00000094242	ENSDARG00000114349	zgc:194221 (ENSDARG00000039687)	znf1162 (ENSDARG00000071833)	zgc:110821 (ENSDARG00000077085)
Euteleosteomorpha	ANCESTRAL SPECIES	237												ENSGT00940000155297.hb.b	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b #15	ENSGT01050000244955.b.c	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00950000182917.b.a.b	ENSGT00990000204641.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571
Acanthomorphata	ANCESTRAL SPECIES	11	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT00390000008338	ENSGT00940000166722.a	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00950000182917.b.a.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	9	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00760000120380	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00950000182917.b.a.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a
Percomorphaceae	ANCESTRAL SPECIES	12	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00760000120380	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Tiger tail seahorse	MODERN SPECIES	469	ENSHCOG00000017170	ENSHCOG00000017166	mysm1 (ENSHCOG00000017146)	ENSHCOG00000017128	dab1a (ENSHCOG00000017116)	PRKAA2 (ENSHCOG00000017092)	PLPP3 (ENSHCOG00000017067)	bloc1s2 (ENSHCOG00000017048)	ENSHCOG00000017025	PCSK9 (ENSHCOG00000016871)	si:dkeyp-51f12.2 (ENSHCOG00000016852)	dhcr24 (ENSHCOG00000016843)	ENSHCOG00000016824	ENSHCOG00000016818	slc35d1a (ENSHCOG00000016805)	aqp12 (ENSHCOG00000016776) #22	rpp21 (ENSHCOG00000016770)	pak2b (ENSHCOG00000016762)	pigx (ENSHCOG00000016719)	cep19 (ENSHCOG00000016682)	ing5a (ENSHCOG00000016672)	plekhb2 (ENSHCOG00000016651)	plekhb2 (ENSHCOG00000016604)	ankrd29 (ENSHCOG00000016588)	OSBPL1A (ENSHCOG00000016558)	impact (ENSHCOG00000016507)	ENSHCOG00000016503	tgm1l4 (ENSHCOG00000016491)	rabggta (ENSHCOG00000016456)	ENSHCOG00000016451	ENSHCOG00000016424
Percomorphaceae_B	ANCESTRAL SPECIES	9	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Ovalentaria	ANCESTRAL SPECIES	9	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00760000120380	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Ovalentaria_B	ANCESTRAL SPECIES	8	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00760000120380	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Pomacentridae	ANCESTRAL SPECIES	14	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000166247	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121	ENSGT00940000162556.E.a.o
Pomacentridae_A	ANCESTRAL SPECIES		ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000166247	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121	ENSGT00940000162556.E.a.o
Amphiprion	ANCESTRAL SPECIES	2	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000166247	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121	ENSGT00940000162556.E.a.o
Clown anemonefish	MODERN SPECIES	1006																aqp12 (ENSAOCG00000004186) #22	rpp21 (ENSAOCG00000004192)	pak2b (ENSAOCG00000004230)	pigx (ENSAOCG00000004240)	cep19 (ENSAOCG00000004246)	ing5a (ENSAOCG00000004251)	plekhb2 (ENSAOCG00000004273)	ENSAOCG00000004297	ankrd29 (ENSAOCG00000002183)	ENSAOCG00000004340	OSBPL1A (ENSAOCG00000000159)	impact (ENSAOCG00000004482)	ENSAOCG00000004498	tgm1l4 (ENSAOCG00000004535)	rabggta (ENSAOCG00000000169)	ENSAOCG00000004579
Orange clownfish	MODERN SPECIES	11	ENSAPEG00000012818	mysm1 (ENSAPEG00000012891)	ENSAPEG00000012990	dab1a (ENSAPEG00000013009)	PRKAA2 (ENSAPEG00000013039)	PLPP3 (ENSAPEG00000013079)	bloc1s2 (ENSAPEG00000013118)	ENSAPEG00000013153	PCSK9 (ENSAPEG00000013347)	ENSAPEG00000013382	si:dkeyp-51f12.2 (ENSAPEG00000013400)	dhcr24 (ENSAPEG00000013406)	ENSAPEG00000013436	slc35d1a (ENSAPEG00000013451)	slc35d1a (ENSAPEG00000013629)	aqp12 (ENSAPEG00000013721) #22	ENSAPEG00000013689	pak2b (ENSAPEG00000013742)	pigx (ENSAPEG00000013818)	cep19 (ENSAPEG00000013843)	ing5a (ENSAPEG00000013848)	plekhb2 (ENSAPEG00000013858)	ENSAPEG00000013887	ankrd29 (ENSAPEG00000013937)	ENSAPEG00000014034	OSBPL1A (ENSAPEG00000014094)	impact (ENSAPEG00000014260)	ENSAPEG00000014307	tgm1l4 (ENSAPEG00000014332)	rabggta (ENSAPEG00000014384)	ENSAPEG00000014403
Spiny chromis	MODERN SPECIES	1666														ENSAPOG00000008049	slc35d1a (ENSAPOG00000008097)	aqp12 (ENSAPOG00000008120) #22	rpp21 (ENSAPOG00000008135)	pak2b (ENSAPOG00000008211)	pigx (ENSAPOG00000008226)	cep19 (ENSAPOG00000008233)	ing5a (ENSAPOG00000008276)	plekhb2 (ENSAPOG00000008323)	ENSAPOG00000008383	ankrd29 (ENSAPOG00000008389)	ENSAPOG00000008425	OSBPL1A (ENSAPOG00000008606)
Bicolor damselfish	MODERN SPECIES	489								bloc1s2 (ENSSPAG00000013758)	ENSSPAG00000013801	PCSK9 (ENSSPAG00000013953)	ENSSPAG00000013968	si:dkeyp-51f12.2 (ENSSPAG00000013978)	dhcr24 (ENSSPAG00000013984)	ENSSPAG00000014008	slc35d1a (ENSSPAG00000014027)	aqp12 (ENSSPAG00000014076) #22	rpp21 (ENSSPAG00000014089)	pak2b (ENSSPAG00000014106)	ENSSPAG00000014132	cep19 (ENSSPAG00000014156)	ing5a (ENSSPAG00000014142)	plekhb2 (ENSSPAG00000014167)	ENSSPAG00000014196	ankrd29 (ENSSPAG00000014239)	ENSSPAG00000014382	OSBPL1A (ENSSPAG00000015684)	impact (ENSSPAG00000015795)	ENSSPAG00000015847	ENSSPAG00000015873	rabggta (ENSSPAG00000015890)	ENSSPAG00000015927
Cichlidae	ANCESTRAL SPECIES	17	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00760000120380	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	10	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00760000120380	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	16	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00760000120380	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a.k	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Burton s mouthbrooder	MODERN SPECIES	324	tmed5 (ENSHBUG00000017643)	SUCO (ENSHBUG00000017615)	mysm1 (ENSHBUG00000017574)	OMA1 (ENSHBUG00000017561)	dab1a (ENSHBUG00000017518)	ENSHBUG00000001155	PRKAA2 (ENSHBUG00000017301)	PLPP3 (ENSHBUG00000017258)	bloc1s2 (ENSHBUG00000017220)	USP24 (ENSHBUG00000017193)	PCSK9 (ENSHBUG00000017049)	ENSHBUG00000017019	dhcr24 (ENSHBUG00000017015)	ENSHBUG00000016981	slc35d1a (ENSHBUG00000016965)	aqp12 (ENSHBUG00000016915) #22	pak2b (ENSHBUG00000016901)	ENSHBUG00000016885	ing5a (ENSHBUG00000016865)	cep19 (ENSHBUG00000016811)	plekhb2 (ENSHBUG00000016792)	ENSHBUG00000016731	ankrd29 (ENSHBUG00000016507)	ENSHBUG00000016479	OSBPL1A (ENSHBUG00000016458)	impact (ENSHBUG00000016425)	ENSHBUG00000016362	tgm1l4 (ENSHBUG00000016327)	rabggta (ENSHBUG00000016310)	ENSHBUG00000016293	ENSHBUG00000016284
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a.k	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
P. nyererei	MODERN SPECIES	341	ENSPNYG00000008547	mysm1 (ENSPNYG00000008567)	OMA1 (ENSPNYG00000008587)	dab1a (ENSPNYG00000008609)	PRKAA2 (ENSPNYG00000008642)	PLPP3 (ENSPNYG00000008688)	ENSPNYG00000008706	bloc1s2 (ENSPNYG00000008717)	USP24 (ENSPNYG00000008737)	PCSK9 (ENSPNYG00000008898)	ENSPNYG00000008911	si:dkeyp-51f12.2 (ENSPNYG00000008922)	dhcr24 (ENSPNYG00000008937)	ENSPNYG00000008971	slc35d1a (ENSPNYG00000008988)	aqp12 (ENSPNYG00000009029) #22	rpp21 (ENSPNYG00000009022)	pak2b (ENSPNYG00000009055)	pigx (ENSPNYG00000009104)	cep19 (ENSPNYG00000009129)	ing5a (ENSPNYG00000009141)	plekhb2 (ENSPNYG00000009177)	ENSPNYG00000009210	ankrd29 (ENSPNYG00000009234)	ENSPNYG00000009337	OSBPL1A (ENSPNYG00000009767)	ENSPNYG00000009868	impact (ENSPNYG00000009900)	ENSPNYG00000009913	TGM1 (ENSPNYG00000009924)	rabggta (ENSPNYG00000009959)
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a.k	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Zebra mbuna	MODERN SPECIES	1105	tmed5 (ENSMZEG00005019667)	ENSMZEG00005019677	mysm1 (ENSMZEG00005019695)	OMA1 (ENSMZEG00005019698)	dab1a (ENSMZEG00005019709)	PRKAA2 (ENSMZEG00005019786)	PLPP3 (ENSMZEG00005019803)	bloc1s2 (ENSMZEG00005019812)	USP24 (ENSMZEG00005019820)	PCSK9 (ENSMZEG00005019848)	ENSMZEG00005019857	si:dkeyp-51f12.2 (ENSMZEG00005019866)	dhcr24 (ENSMZEG00005019872)	ENSMZEG00005019880	slc35d1a (ENSMZEG00005019883)	aqp12 (ENSMZEG00005019908) #22	rpp21 (ENSMZEG00005019901)	pak2b (ENSMZEG00005019914)	pigx (ENSMZEG00005019925)	cep19 (ENSMZEG00005019931)	ing5a (ENSMZEG00005019933)	plekhb2 (ENSMZEG00005019940)	ENSMZEG00005019950	ankrd29 (ENSMZEG00005019957)	ENSMZEG00005019964	OSBPL1A (ENSMZEG00005019977)	impact (ENSMZEG00005020019)	ENSMZEG00005020028	TGM1 (ENSMZEG00005020037)	rabggta (ENSMZEG00005020051)	ENSMZEG00005020059
Eastern happy	MODERN SPECIES	14	tmed5 (ENSACLG00000013279)	SUCO (ENSACLG00000013285)	mysm1 (ENSACLG00000013299)	OMA1 (ENSACLG00000013324)	dab1a (ENSACLG00000013338)	PRKAA2 (ENSACLG00000013448)	PLPP3 (ENSACLG00000013462)	bloc1s2 (ENSACLG00000013488)	USP24 (ENSACLG00000013500)	PCSK9 (ENSACLG00000014003)	ENSACLG00000014033	si:dkeyp-51f12.2 (ENSACLG00000014050)	dhcr24 (ENSACLG00000014059)	ENSACLG00000014109	slc35d1a (ENSACLG00000014117)	aqp12 (ENSACLG00000014160) #22	rpp21 (ENSACLG00000014185)	pak2b (ENSACLG00000014205)	ENSACLG00000014274	ing5a (ENSACLG00000014294)	cep19 (ENSACLG00000014324)	plekhb2 (ENSACLG00000014337)	ENSACLG00000014390	ankrd29 (ENSACLG00000014432)	ENSACLG00000014438	ENSACLG00000014455	OSBPL1A (ENSACLG00000014492)	ENSACLG00000014567	impact (ENSACLG00000014586)	ENSACLG00000014637	tgm1l4 (ENSACLG00000014708)
Lyretail cichlid	MODERN SPECIES	307	ENSNBRG00000023752	mysm1 (ENSNBRG00000023774)	OMA1 (ENSNBRG00000023811)	dab1a (ENSNBRG00000023819)	PRKAA2 (ENSNBRG00000023833)	PLPP3 (ENSNBRG00000023856)	bloc1s2 (ENSNBRG00000023875)	USP24 (ENSNBRG00000023893)	ENSNBRG00000023919	ENSNBRG00000023926	si:dkeyp-51f12.3 (ENSNBRG00000000233)	si:dkeyp-51f12.2 (ENSNBRG00000000235)	dhcr24 (ENSNBRG00000000240)	ENSNBRG00000000258	slc35d1a (ENSNBRG00000000268)	aqp12 (ENSNBRG00000000284) #22	rpp21 (ENSNBRG00000000289)	pak2b (ENSNBRG00000000294)	pigx (ENSNBRG00000000337)	cep19 (ENSNBRG00000000343)	ing5a (ENSNBRG00000000357)	plekhb2 (ENSNBRG00000000389)	ENSNBRG00000000394	ankrd29 (ENSNBRG00000000442)	ENSNBRG00000000586	OSBPL1A (ENSNBRG00000001428)	impact (ENSNBRG00000001771)	ENSNBRG00000001823	rabggta (ENSNBRG00000002044)	ENSNBRG00000002136	ENSNBRG00000002155
Nile tilapia	MODERN SPECIES	14	ENSONIG00000002783	mysm1 (ENSONIG00000002787)	ENSONIG00000036437	dab1a (ENSONIG00000002791)	prkaa2 (ENSONIG00000002797)	PLPP3 (ENSONIG00000002801)	ENSONIG00000036210	bloc1s2 (ENSONIG00000041972)	USP24 (ENSONIG00000002812)	PCSK9 (ENSONIG00000002825)	ENSONIG00000039912	dhcr24 (ENSONIG00000002829)	ENSONIG00000002834	slc35d1a (ENSONIG00000002835)	ENSONIG00000040129	aqp12 (ENSONIG00000002840) #22	rpp21 (ENSONIG00000037559)	pak2b (ENSONIG00000002841)	pigx (ENSONIG00000002846)	cep19 (ENSONIG00000002847)	ing5a (ENSONIG00000002848)	plekhb2 (ENSONIG00000002853)	ENSONIG00000002855	ankrd29 (ENSONIG00000030842)	ENSONIG00000002859	ENSONIG00000038061	ENSONIG00000002865	OSBPL1A (ENSONIG00000002872)	ENSONIG00000002880	tgm1l4 (ENSONIG00000002887)	rabggta (ENSONIG00000002893)
Midas cichlid	MODERN SPECIES	988	ENSACIG00000013797	mysm1 (ENSACIG00000013761)	ENSACIG00000013736	dab1a (ENSACIG00000013707)	PRKAA2 (ENSACIG00000013684)	PLPP3 (ENSACIG00000013661)	bloc1s2 (ENSACIG00000013650)	ENSACIG00000013528	PCSK9 (ENSACIG00000013494)	ENSACIG00000013486	si:dkeyp-51f12.3 (ENSACIG00000013476)	si:dkeyp-51f12.2 (ENSACIG00000013465)	dhcr24 (ENSACIG00000013449)	ENSACIG00000013405	slc35d1a (ENSACIG00000013387)	aqp12 (ENSACIG00000013374) #22	rpp21 (ENSACIG00000013344)	pak2b (ENSACIG00000013319)	ENSACIG00000013306	pigx (ENSACIG00000013288)	cep19 (ENSACIG00000013273)	ing5a (ENSACIG00000013256)	plekhb2 (ENSACIG00000013221)	ENSACIG00000013186	ankrd29 (ENSACIG00000013158)	ENSACIG00000012783	ENSACIG00000012744	OSBPL1A (ENSACIG00000012675)	impact (ENSACIG00000012646)	ENSACIG00000012626	TGM1 (ENSACIG00000012523)
Atherinomorphae	ANCESTRAL SPECIES	7	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	7	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Aplocheiloidei	ANCESTRAL SPECIES	58	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121	ENSGT00940000162556.A.a.a.b
Mangrove rivulus	MODERN SPECIES	115	mysm1 (ENSKMAG00000003432)	ENSKMAG00000003475	dab1a (ENSKMAG00000003539)	ENSKMAG00000003660	PRKAA2 (ENSKMAG00000003684)	PLPP3 (ENSKMAG00000003740)	bloc1s2 (ENSKMAG00000003787)	USP24 (ENSKMAG00000003811)	PCSK9 (ENSKMAG00000004028)	ENSKMAG00000004063	si:dkeyp-51f12.2 (ENSKMAG00000004072)	dhcr24 (ENSKMAG00000004085)	ENSKMAG00000004139	slc35d1a (ENSKMAG00000004149)	rpp21 (ENSKMAG00000004174)	aqp12 (ENSKMAG00000004160) #22	pak2b (ENSKMAG00000004186)	pigx (ENSKMAG00000004232)	cep19 (ENSKMAG00000004255)	ing5a (ENSKMAG00000004283)	plekhb2 (ENSKMAG00000004329)	VPS4B (ENSKMAG00000004366)	ankrd29 (ENSKMAG00000004420)	ENSKMAG00000004480	OSBPL1A (ENSKMAG00000004509)	impact (ENSKMAG00000004598)	ENSKMAG00000004624	TGM1 (ENSKMAG00000004665)	rabggta (ENSKMAG00000004715)	ENSKMAG00000004774	ENSKMAG00000004800
Turquoise killifish	MODERN SPECIES	1626	ENSNFUG00015021534	mysm1 (ENSNFUG00015021526)	ENSNFUG00015021518	DAB1A (ENSNFUG00015021477)	ENSNFUG00015021465	PRKAA2 (ENSNFUG00015021418)	PPAP2B (ENSNFUG00015021408)	BLOC1S2 (ENSNFUG00015021403)	USP24 (ENSNFUG00015021252)	PCSK9 (ENSNFUG00015021230)	ENSNFUG00015021228	ENSNFUG00015021226	DHCR24 (ENSNFUG00015021074)	ENSNFUG00015021066	slc35d1a (ENSNFUG00015021009)	aqp12 (ENSNFUG00015021002) #22	RPP21 (ENSNFUG00015021000)	pak2b (ENSNFUG00015020982)	PIGX (ENSNFUG00015020976)	CEP19 (ENSNFUG00015020974)	ING5A (ENSNFUG00015020957)	PLEKHB2 (ENSNFUG00015020953)	ENSNFUG00015020452	ANKRD29 (ENSNFUG00015020410)	ENSNFUG00015020403	ENSNFUG00015020402	OSBPL1A (ENSNFUG00015018674)	IMPACT (ENSNFUG00015018627)	ENSNFUG00015018513	TGM1 (ENSNFUG00015018501)	RABGGTA (ENSNFUG00015017991)
Cyprinodontoidei	ANCESTRAL SPECIES	10	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Poeciliinae	ANCESTRAL SPECIES	7	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Poecilia	ANCESTRAL SPECIES	1	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT00940000176055	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
NAME_6	ANCESTRAL SPECIES	15	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00940000176055	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Amazon molly	MODERN SPECIES	289	ENSPFOG00000015048	mysm1 (ENSPFOG00000015168)	ENSPFOG00000015216	dab1a (ENSPFOG00000015258)	ENSPFOG00000023268	PRKAA2 (ENSPFOG00000015403)	PLPP3 (ENSPFOG00000015483)	bloc1s2 (ENSPFOG00000015552)	USP24 (ENSPFOG00000015612)	ENSPFOG00000015979	ENSPFOG00000024341	si:dkeyp-51f12.3 (ENSPFOG00000016042)	dhcr24 (ENSPFOG00000016050)	ENSPFOG00000016065	slc35d1a (ENSPFOG00000016077)	aqp12 (ENSPFOG00000016148) #22	pak2b (ENSPFOG00000016169)	ENSPFOG00000021768	cep19 (ENSPFOG00000016254)	ing5a (ENSPFOG00000016260)	plekhb2 (ENSPFOG00000016279)	ENSPFOG00000016315	ankrd29 (ENSPFOG00000016343)	ENSPFOG00000016348	ENSPFOG00000016376	OSBPL1A (ENSPFOG00000016447)	impact (ENSPFOG00000024814)	ENSPFOG00000016565	ENSPFOG00000016626	rabggta (ENSPFOG00000016750)	ENSPFOG00000016787
Sailfin molly	MODERN SPECIES	761																aqp12 (ENSPLAG00000005543) #22	rpp21 (ENSPLAG00000005510)	pak2b (ENSPLAG00000005485)	pigx (ENSPLAG00000005424)	cep19 (ENSPLAG00000005405)	ing5a (ENSPLAG00000005350)	plekhb2 (ENSPLAG00000004661)	ENSPLAG00000004654	ankrd29 (ENSPLAG00000000832)	ENSPLAG00000004587	ENSPLAG00000004568
Guppy	MODERN SPECIES	456	pigc (ENSPREG00000000621)	tmed5 (ENSPREG00000000592)	SUCO (ENSPREG00000021307)	mysm1 (ENSPREG00000021255)	ENSPREG00000021238	dab1a (ENSPREG00000021212)	PRKAA2 (ENSPREG00000021186)	PLPP3 (ENSPREG00000021155)	bloc1s2 (ENSPREG00000021135)	USP24 (ENSPREG00000021017)	PCSK9 (ENSPREG00000020976)	si:dkeyp-51f12.2 (ENSPREG00000020965)	dhcr24 (ENSPREG00000020942)	ENSPREG00000020929	slc35d1a (ENSPREG00000020915)	aqp12 (ENSPREG00000020905) #22	rpp21 (ENSPREG00000020887)	pak2b (ENSPREG00000020844)	pigx (ENSPREG00000020829)	cep19 (ENSPREG00000020819)	ing5a (ENSPREG00000020811)	plekhb2 (ENSPREG00000020778)	ENSPREG00000020757	ankrd29 (ENSPREG00000020726)	ENSPREG00000020708	OSBPL1A (ENSPREG00000020609)	impact (ENSPREG00000020573)	ENSPREG00000020498	tgm1l4 (ENSPREG00000020472)	rabggta (ENSPREG00000020451)	ENSPREG00000020440
Platyfish	MODERN SPECIES	23	ENSXMAG00000011212	mysm1 (ENSXMAG00000011201)	ENSXMAG00000011200	dab1a (ENSXMAG00000011184)	ENSXMAG00000011181	PRKAA2 (ENSXMAG00000011173)	PLPP3 (ENSXMAG00000011165)	bloc1s2 (ENSXMAG00000011157)	ENSXMAG00000011121	PCSK9 (ENSXMAG00000011110)	ENSXMAG00000011108	si:dkeyp-51f12.2 (ENSXMAG00000011103)	dhcr24 (ENSXMAG00000011090)	ENSXMAG00000025776	slc35d1a (ENSXMAG00000010878)	aqp12 (ENSXMAG00000023550) #22	rpp21 (ENSXMAG00000026619)	pak2b (ENSXMAG00000011295)	pigx (ENSXMAG00000022369)	cep19 (ENSXMAG00000011279)	ing5a (ENSXMAG00000011282)	plekhb2 (ENSXMAG00000011256)	ENSXMAG00000011238	ankrd29 (ENSXMAG00000011233)	ENSXMAG00000022898	ENSXMAG00000011068	OSBPL1A (ENSXMAG00000011017)	impact (ENSXMAG00000011007)	ENSXMAG00000011003	ENSXMAG00000012676	rabggta (ENSXMAG00000012644)
NAME_4	ANCESTRAL SPECIES	11	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000166247	ENSGT00940000179840	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121	ENSGT01100000263538.A.a.a.b.b
Mummichog	MODERN SPECIES	2231	tmed5 (ENSFHEG00000000982)	ENSFHEG00000000984	mysm1 (ENSFHEG00000000988)	ENSFHEG00000000990	dab1a (ENSFHEG00000000992)	PRKAA2 (ENSFHEG00000000998)	PLPP3 (ENSFHEG00000001001)	bloc1s2 (ENSFHEG00000000664)	ENSFHEG00000001014	PCSK9 (ENSFHEG00000000043)	ENSFHEG00000001032	si:dkeyp-51f12.2 (ENSFHEG00000001034)	dhcr24 (ENSFHEG00000001039)	ENSFHEG00000001042	slc35d1a (ENSFHEG00000001045)	aqp12 (ENSFHEG00000001047) #22	ENSFHEG00000001048	pak2b (ENSFHEG00000001052)	pigx (ENSFHEG00000001055)	cep19 (ENSFHEG00000001057)	ing5a (ENSFHEG00000001060)	plekhb2 (ENSFHEG00000001066)	ENSFHEG00000001070	ankrd29 (ENSFHEG00000001072)	ENSFHEG00000001079	OSBPL1A (ENSFHEG00000001094)	impact (ENSFHEG00000001101)	ENSFHEG00000001104	tgm1l4 (ENSFHEG00000001110)	rabggta (ENSFHEG00000001120)	ENSFHEG00000001124
Sheepshead minnow	MODERN SPECIES	981													dhcr24 (ENSCVAG00000015558)	ENSCVAG00000015540	slc35d1a (ENSCVAG00000015536)	aqp12 (ENSCVAG00000015496) #22	rpp21 (ENSCVAG00000015508)	pak2b (ENSCVAG00000015480)	pigx (ENSCVAG00000015424)	cep19 (ENSCVAG00000015415)	ing5a (ENSCVAG00000015410)	plekhb2 (ENSCVAG00000015397)	ENSCVAG00000015363	ankrd29 (ENSCVAG00000015316)	ENSCVAG00000015299	OSBPL1A (ENSCVAG00000015287)	impact (ENSCVAG00000015147)	ENSCVAG00000015097
Oryzias	ANCESTRAL SPECIES	30	ENSGT00390000005496	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a.c.b	ENSGT01050000244939.a.a.b.a.b.i	ENSGT00550000075121
Oryzias_a	ANCESTRAL SPECIES	41	ENSGT00940000166903	ENSGT00390000005496	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT01050000245013	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a.c.b	ENSGT00940000163206.b.a.a.c.a	ENSGT01050000244939.a.a.b.a.b.i	ENSGT00550000075121
Chinese medaka	MODERN SPECIES	1183									ENSOSIG00000010224	dab1a (ENSOSIG00000010227)	PRKAA2 (ENSOSIG00000010232)	PLPP3 (ENSOSIG00000010241)	bloc1s2 (ENSOSIG00000010247)	ENSOSIG00000010364	ENSOSIG00000010365	aqp12 (ENSOSIG00000010367) #22	rpp21 (ENSOSIG00000010369)	pak2b (ENSOSIG00000010377)	pigx (ENSOSIG00000010506)	cep19 (ENSOSIG00000010507)	ing5a (ENSOSIG00000010508)	plekhb2 (ENSOSIG00000010515)	ENSOSIG00000010525	ankrd29 (ENSOSIG00000010571)	ENSOSIG00000010574	impact (ENSOSIG00000010578)	ENSOSIG00000010580	OSBPL1A (ENSOSIG00000010610)	TGM1 (ENSOSIG00000012325)	ENSOSIG00000012450	ttc39c (ENSOSIG00000012452)
Japanese Medaka HdrR	MODERN SPECIES	18	rangrf (ENSORLG00000001895)	itpa (ENSORLG00000029653)	mettl13 (ENSORLG00000022310)	ENSORLG00000001885	dab1a (ENSORLG00000001786)	PRKAA2 (ENSORLG00000001742)	PLPP3 (ENSORLG00000023318)	bloc1s2 (ENSORLG00000001696)	USP24 (ENSORLG00000001683)	ENSORLG00000021816	PCSK9 (ENSORLG00000001627)	si:dkeyp-51f12.2 (ENSORLG00000001612)	dhcr24 (ENSORLG00000001602)	ENSORLG00000001579	slc35d1a (ENSORLG00000001574)	aqp12 (ENSORLG00000001572) #22	rpp21 (ENSORLG00000001568)	pak2b (ENSORLG00000001562)	pigx (ENSORLG00000022525)	cep19 (ENSORLG00000001550)	ing5a (ENSORLG00000001546)	plekhb2 (ENSORLG00000027547)	ENSORLG00000001517	ankrd29 (ENSORLG00000001496)	ENSORLG00000001488	OSBPL1A (ENSORLG00000001466)	impact (ENSORLG00000001414)	ENSORLG00000001382	TGM1 (ENSORLG00000001358)	rabggta (ENSORLG00000001324)	TTC39C (ENSORLG00000001287)
Oryzias_b	ANCESTRAL SPECIES	35	ENSGT00390000005496	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945.c	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a.c.b	ENSGT01050000244939.a.a.b.a.b.i	ENSGT00550000075121
Indian medaka	MODERN SPECIES	34	AASDH (ENSOMEG00000011036)	cracd (ENSOMEG00000011089)	chst14 (ENSOMEG00000011113)	cep135 (ENSOMEG00000011159)	exoc1 (ENSOMEG00000011230)	ENSOMEG00000011265	clocka (ENSOMEG00000011416)	tmem165 (ENSOMEG00000011474)	bloc1s2 (ENSOMEG00000011493)	USP24 (ENSOMEG00000011570)	PCSK9 (ENSOMEG00000012234)	si:dkeyp-51f12.2 (ENSOMEG00000012496)	dhcr24 (ENSOMEG00000012515)	ENSOMEG00000012554	slc35d1a (ENSOMEG00000012582)	aqp12 (ENSOMEG00000012604) #22	rpp21 (ENSOMEG00000012626)	pak2b (ENSOMEG00000012651)	ENSOMEG00000012668	pigx (ENSOMEG00000012690)	cep19 (ENSOMEG00000012700)	ing5a (ENSOMEG00000012720)	plekhb2 (ENSOMEG00000012753)	ENSOMEG00000012997	ankrd29 (ENSOMEG00000013134)	ENSOMEG00000013173	OSBPL1A (ENSOMEG00000013270)	ENSOMEG00000013336	impact (ENSOMEG00000013500)	ENSOMEG00000013547	TGM1 (ENSOMEG00000013636)
Javanese ricefish	MODERN SPECIES	18	ITPA (ENSOJAG00000000986)	mettl13 (ENSOJAG00000000978)	pigc (ENSOJAG00000000967)	tmed5 (ENSOJAG00000000958)	ENSOJAG00000000540	mysm1 (ENSOJAG00000015811)	ENSOJAG00000015804	dab1a (ENSOJAG00000015699)	PRKAA2 (ENSOJAG00000015536)	ENSOJAG00000015522	PLPP3 (ENSOJAG00000015499)	bloc1s2 (ENSOJAG00000015467)	PCSK9 (ENSOJAG00000015336)	dhcr24 (ENSOJAG00000015308)	ENSOJAG00000015302	aqp12 (ENSOJAG00000015162) #22	rpp21 (ENSOJAG00000015084)	pak2b (ENSOJAG00000014353)	pigx (ENSOJAG00000014321)	cep19 (ENSOJAG00000014313)	ing5a (ENSOJAG00000014284)	plekhb2 (ENSOJAG00000014250)	VPS4B (ENSOJAG00000013929)	ankrd29 (ENSOJAG00000013866)	ENSOJAG00000013859	OSBPL1A (ENSOJAG00000012369)	ENSOJAG00000012245	impact (ENSOJAG00000012230)	TGM1 (ENSOJAG00000011105)	rabggta (ENSOJAG00000010902)	ttc39c (ENSOJAG00000010736)
Percomorphaceae_C	ANCESTRAL SPECIES	8	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Eupercaria	ANCESTRAL SPECIES	8	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Tetraodontidae	ANCESTRAL SPECIES	5	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000166903	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000160062.b	ENSGT00940000166379	ENSGT00940000157990.a.b	ENSGT00550000075121	ENSGT01050000244939.a.a.b.a.b
Fugu	MODERN SPECIES	12	tmed5 (ENSTRUG00000016455)	ENSTRUG00000016443	mysm1 (ENSTRUG00000016432)	OMA1 (ENSTRUG00000016431)	ENSTRUG00000033147	dab1a (ENSTRUG00000016390)	PRKAA2 (ENSTRUG00000016384)	PLPP3 (ENSTRUG00000016381)	bloc1s2 (ENSTRUG00000016373)	USP24 (ENSTRUG00000016307)	PCSK9 (ENSTRUG00000023397)	ENSTRUG00000020743	dhcr24 (ENSTRUG00000016297)	ENSTRUG00000016292	slc35d1a (ENSTRUG00000022643)	aqp12 (ENSTRUG00000016254) #22	rpp21 (ENSTRUG00000023935)	pak2b (ENSTRUG00000016233)	pigx (ENSTRUG00000021935)	cep19 (ENSTRUG00000028888)	ing5a (ENSTRUG00000021099)	plekhb2 (ENSTRUG00000016204)	VPS4B (ENSTRUG00000016180)	ankrd29 (ENSTRUG00000016177)	ENSTRUG00000020140	ENSTRUG00000016054	nrl (ENSTRUG00000016024)	ENSTRUG00000016009	ENSTRUG00000032687	ENSTRUG00000030164	ENSTRUG00000030367
Tetraodon	MODERN SPECIES		ENSTNIG00000002649	myoc (ENSTNIG00000002650)	vamp4 (ENSTNIG00000002651)	rangrf (ENSTNIG00000000478)	itpa (ENSTNIG00000002652)	mettl13 (ENSTNIG00000002653)	ENSTNIG00000002654	dab1a (ENSTNIG00000003696)	PRKAA2 (ENSTNIG00000006745)	PLPP3 (ENSTNIG00000017619)	bloc1s2 (ENSTNIG00000017620)	USP24 (ENSTNIG00000017621)	PCSK9 (ENSTNIG00000017622)	dhcr24 (ENSTNIG00000017623)	slc35d1a (ENSTNIG00000017624)	aqp12 (ENSTNIG00000017625) #22	pak2b (ENSTNIG00000017626)	pigx (ENSTNIG00000017627)	cep19 (ENSTNIG00000017628)	ing5a (ENSTNIG00000017629)	plekhb2 (ENSTNIG00000017630)	VPS4B (ENSTNIG00000017631)	ankrd29 (ENSTNIG00000017632)	ENSTNIG00000000466	ENSTNIG00000017633	ENSTNIG00000017634	nrl (ENSTNIG00000017635)	CARMIL3 (ENSTNIG00000017636)	ENSTNIG00000017637	rabggta (ENSTNIG00000017638)	TGM1 (ENSTNIG00000017639)
Eupecaria_A	ANCESTRAL SPECIES	11	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Ballan wrasse	MODERN SPECIES	43	ENSLBEG00000009367	mysm1 (ENSLBEG00000009441)	ENSLBEG00000009519	dab1a (ENSLBEG00000009621)	PRKAA2 (ENSLBEG00000009790)	PLPP3 (ENSLBEG00000009858)	bloc1s2 (ENSLBEG00000009918)	USP24 (ENSLBEG00000009998)	PCSK9 (ENSLBEG00000010214)	ENSLBEG00000010251	si:dkeyp-51f12.2 (ENSLBEG00000010264)	dhcr24 (ENSLBEG00000010285)	ENSLBEG00000010327	slc35d1a (ENSLBEG00000010358)	rpp21 (ENSLBEG00000010436)	aqp12 (ENSLBEG00000010455) #22	pak2b (ENSLBEG00000010493)	pigx (ENSLBEG00000010570)	cep19 (ENSLBEG00000010586)	ing5a (ENSLBEG00000010608)	plekhb2 (ENSLBEG00000010657)	ENSLBEG00000010709	ankrd29 (ENSLBEG00000010797)	ENSLBEG00000010819	ENSLBEG00000010861	zgc:171480 (ENSLBEG00000010915)	ndufa11 (ENSLBEG00000010937)	ctns (ENSLBEG00000010945)	slc5a9 (ENSLBEG00000010966)	ENSLBEG00000010995	ptprfa (ENSLBEG00000011071)
Eupecaria_B	ANCESTRAL SPECIES	10	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Perciformes	ANCESTRAL SPECIES	8	ENSGT00390000005496	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000166247	ENSGT00490000043472	ENSGT01050000245013	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00990000209169	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Perciformes_a	ANCESTRAL SPECIES	6	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000166247	ENSGT00490000043472	ENSGT01050000245013	ENSGT01100000263851	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00990000209169	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Pike perch	MODERN SPECIES	26	pigc (ENSSLUG00000022947)	tmed5 (ENSSLUG00000022949)	ENSSLUG00000022959	mysm1 (ENSSLUG00000022982)	ENSSLUG00000023047	dab1a (ENSSLUG00000023054)	PRKAA2 (ENSSLUG00000023061)	PLPP3 (ENSSLUG00000023096)	bloc1s2 (ENSSLUG00000023099)	ENSSLUG00000023111	PCSK9 (ENSSLUG00000023148)	ENSSLUG00000023210	dhcr24 (ENSSLUG00000023215)	ENSSLUG00000023226	slc35d1a (ENSSLUG00000005228)	aqp12 (ENSSLUG00000005286) #22	rpp21 (ENSSLUG00000005298)	pak2b (ENSSLUG00000005432)	pigx (ENSSLUG00000006613)	cep19 (ENSSLUG00000006623)	ing5a (ENSSLUG00000006639)	plekhb2 (ENSSLUG00000006681)	plekhb2 (ENSSLUG00000006696)	ENSSLUG00000006788	ankrd29 (ENSSLUG00000007769)	ENSSLUG00000007848	ENSSLUG00000008698	OSBPL1A (ENSSLUG00000008755)	impact (ENSSLUG00000010393)	ENSSLUG00000010508	TGM1 (ENSSLUG00000010627)
Channel bull blenny	MODERN SPECIES	18	pigc (ENSCGOG00000000743)	tmed5 (ENSCGOG00000000741)	ENSCGOG00000000410	mysm1 (ENSCGOG00000000334)	ENSCGOG00000000319	dab1a (ENSCGOG00000000314)	PRKAA2 (ENSCGOG00000000297)	PLPP3 (ENSCGOG00000000293)	bloc1s2 (ENSCGOG00000000291)	ENSCGOG00000000249	PCSK9 (ENSCGOG00000000106)	ENSCGOG00000024617	dhcr24 (ENSCGOG00000024605)	ENSCGOG00000024601	slc35d1a (ENSCGOG00000024594)	aqp12 (ENSCGOG00000024587) #22	rpp21 (ENSCGOG00000024586)	pak2b (ENSCGOG00000024511)	pigx (ENSCGOG00000024456)	cep19 (ENSCGOG00000024455)	ing5a (ENSCGOG00000024451)	plekhb2 (ENSCGOG00000024446)	ENSCGOG00000024407	ankrd29 (ENSCGOG00000024402)	ENSCGOG00000024388	OSBPL1A (ENSCGOG00000024297)	impact (ENSCGOG00000024249)	ENSCGOG00000024246	TGM1 (ENSCGOG00000024159)	rabggta (ENSCGOG00000024137)	ENSCGOG00000024131
Cottioidei	ANCESTRAL SPECIES	5	ENSGT00940000180279	ENSGT00940000166903	ENSGT00390000005496	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000166247	ENSGT01050000245013	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121	ENSGT00940000162556.A.a.a.a
Lumpfish	MODERN SPECIES	19	tmed5 (ENSCLMG00005011137)	ENSCLMG00005010883	ENSCLMG00005010877	dab1a (ENSCLMG00005010869)	PRKAA2 (ENSCLMG00005010749)	PLPP3 (ENSCLMG00005010743)	ENSCLMG00005010742	bloc1s2 (ENSCLMG00005010741)	ENSCLMG00005010643	ENSCLMG00005010637	dhcr24 (ENSCLMG00005010636)	ENSCLMG00005010635	ENSCLMG00005010634	ENSCLMG00005010633	slc35d1a (ENSCLMG00005010597)	aqp12 (ENSCLMG00005010590) #22	rpp21 (ENSCLMG00005010588)	pak2b (ENSCLMG00005010578)	pigx (ENSCLMG00005010576)	cep19 (ENSCLMG00005010575)	ing5a (ENSCLMG00005010573)	plekhb2 (ENSCLMG00005010571)	ENSCLMG00005008757	ankrd29 (ENSCLMG00005008737)	ENSCLMG00005006593	ENSCLMG00005000953	impact (ENSCLMG00005000901)	ENSCLMG00005000899	TGM1 (ENSCLMG00005000649)	rabggta (ENSCLMG00005000623)	ENSCLMG00005000618
Stickleback	MODERN SPECIES	227													dhcr24 (ENSGACG00000011116)	ENSGACG00000011106	slc35d1a (ENSGACG00000011091)	aqp12 (ENSGACG00000011088) #22	ENSGACG00000011087	pak2b (ENSGACG00000011069)	cep19 (ENSGACG00000011064)	ing5a (ENSGACG00000011045)	plekhb2 (ENSGACG00000011012)	ENSGACG00000010991	ankrd29 (ENSGACG00000010979)	ENSGACG00000010918	OSBPL1A (ENSGACG00000010903)
Eupecaria_C	ANCESTRAL SPECIES	4	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Gilthead seabream	MODERN SPECIES	2	pigc (ENSSAUG00010008672)	tmed5 (ENSSAUG00010008669)	ENSSAUG00010008518	mysm1 (ENSSAUG00010008508)	ENSSAUG00010008505	dab1a (ENSSAUG00010008408)	PRKAA2 (ENSSAUG00010008072)	PLPP3 (ENSSAUG00010008061)	bloc1s2 (ENSSAUG00010008058)	ENSSAUG00010008051	PCSK9 (ENSSAUG00010008049)	ENSSAUG00010008048	dhcr24 (ENSSAUG00010008043)	ENSSAUG00010008030	slc35d1a (ENSSAUG00010008023)	aqp12 (ENSSAUG00010008017) #22	rpp21 (ENSSAUG00010008011)	pak2b (ENSSAUG00010007388)	pigx (ENSSAUG00010007371)	cep19 (ENSSAUG00010007370)	ing5a (ENSSAUG00010007369)	plekhb2 (ENSSAUG00010007365)	ENSSAUG00010006756	ankrd29 (ENSSAUG00010006706)	ENSSAUG00010006701	ENSSAUG00010006695	OSBPL1A (ENSSAUG00010006637)	ENSSAUG00010006622	impact (ENSSAUG00010006620)	ENSSAUG00010006593	tgm1l4 (ENSSAUG00010003416)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	3	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121	ENSGT00940000162556.A.a.a.a
European seabass	MODERN SPECIES	17	pigc (ENSDLAG00005003854)	tmed5 (ENSDLAG00005027801)	ENSDLAG00005031166	ENSDLAG00005032001	mysm1 (ENSDLAG00005005308)	dab1a (ENSDLAG00005031615)	ENSDLAG00005005370	PRKAA2 (ENSDLAG00005005389)	PLPP3 (ENSDLAG00005027885)	bloc1s2 (ENSDLAG00005005692)	USP24 (ENSDLAG00005005735)	PCSK9 (ENSDLAG00005006134)	ENSDLAG00005006254	dhcr24 (ENSDLAG00005006275)	ENSDLAG00005006354	ENSDLAG00005026495 #22	ENSDLAG00005006408	PAK2 (ENSDLAG00005006441)	cep19 (ENSDLAG00005030828)	pigx (ENSDLAG00005031775)	plekhb2 (ENSDLAG00005029959)	ENSDLAG00005006655	ENSDLAG00005007883	ENSDLAG00005007969	ENSDLAG00005009708	ENSDLAG00005009914	ENSDLAG00005010704	ENSDLAG00005011118	ENSDLAG00005011132	ENSDLAG00005033629	ENSDLAG00005011140
Large yellow croaker	MODERN SPECIES	489	tmed5 (ENSLCRG00005005892)	ENSLCRG00005005910	mysm1 (ENSLCRG00005006703)	ENSLCRG00005006850	dab1a (ENSLCRG00005006853)	ENSLCRG00005006867	PRKAA2 (ENSLCRG00005006874)	PLPP3 (ENSLCRG00005006945)	bloc1s2 (ENSLCRG00005006948)	USP24 (ENSLCRG00005006951)	PCSK9 (ENSLCRG00005006960)	ENSLCRG00005006961	dhcr24 (ENSLCRG00005006964)	ENSLCRG00005006970	slc35d1a (ENSLCRG00005006974)	aqp12 (ENSLCRG00005007050) #22	rpp21 (ENSLCRG00005007051)	pak2b (ENSLCRG00005007053)	ENSLCRG00005007168	ENSLCRG00005007172	plekhb2 (ENSLCRG00005007174)	plekhb2 (ENSLCRG00005007176)	ing5a (ENSLCRG00005007179)	ENSLCRG00005007187	ankrd29 (ENSLCRG00005009502)	ENSLCRG00005009509	OSBPL1A (ENSLCRG00005010042)	impact (ENSLCRG00005010377)	ENSLCRG00005010381	tgm1l4 (ENSLCRG00005010399)	rabggta (ENSLCRG00005012319)
Percomorphaceae_D	ANCESTRAL SPECIES	8	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Anabantaria	ANCESTRAL SPECIES	7	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT01100000263851	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121	ENSGT00940000162556.A.a.a.a
Zig-zag eel	MODERN SPECIES	18	pigc (ENSMAMG00000016582)	tmed5 (ENSMAMG00000028660)	ENSMAMG00000016526	mysm1 (ENSMAMG00000016507)	ENSMAMG00000016500	dab1a (ENSMAMG00000016456)	PRKAA2 (ENSMAMG00000016421)	PLPP3 (ENSMAMG00000016397)	bloc1s2 (ENSMAMG00000016274)	ENSMAMG00000016118	PCSK9 (ENSMAMG00000016086)	ENSMAMG00000016078	dhcr24 (ENSMAMG00000016050)	ENSMAMG00000016036	ENSMAMG00000016023	ENSMAMG00000016000 #22	ENSMAMG00000016016	pak2b (ENSMAMG00000015984)	pigx (ENSMAMG00000015964)	cep19 (ENSMAMG00000015962)	ing5a (ENSMAMG00000015942)	plekhb2 (ENSMAMG00000015918)	ENSMAMG00000015893	ankrd29 (ENSMAMG00000015837)	ENSMAMG00000015819	ENSMAMG00000015710	ENSMAMG00000015661	ENSMAMG00000026729	ENSMAMG00000015629	ENSMAMG00000015619	ENSMAMG00000025737
Anabantoidei	ANCESTRAL SPECIES	6	ENSGT00390000005496	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01100000263851	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121	ENSGT00940000162556.A.a.a.a
Climbing perch	MODERN SPECIES	17	pigc (ENSATEG00000016982)	tmed5 (ENSATEG00000016873)	ENSATEG00000016821	mysm1 (ENSATEG00000016785)	ENSATEG00000016771	dab1a (ENSATEG00000016730)	PRKAA2 (ENSATEG00000016668)	PLPP3 (ENSATEG00000016646)	bloc1s2 (ENSATEG00000016589)	USP24 (ENSATEG00000016443)	PCSK9 (ENSATEG00000016417)	ENSATEG00000029085	dhcr24 (ENSATEG00000016378)	ENSATEG00000027128	ENSATEG00000016281	ENSATEG00000016252 #22	ENSATEG00000016264	pak2b (ENSATEG00000016195)	pigx (ENSATEG00000016163)	cep19 (ENSATEG00000025916)	ing5a (ENSATEG00000016140)	plekhb2 (ENSATEG00000016126)	ENSATEG00000016092	ankrd29 (ENSATEG00000025763)	ENSATEG00000016066	ENSATEG00000015860	ENSATEG00000015766	ENSATEG00000015744	ENSATEG00000015721	ENSATEG00000015680	ENSATEG00000029180
Siamese fighting fish	MODERN SPECIES	15	pigc (ENSBSLG00000015814)	tmed5 (ENSBSLG00000015821)	ENSBSLG00000015826	mysm1 (ENSBSLG00000015958)	OMA1 (ENSBSLG00000015968)	dab1a (ENSBSLG00000016784)	ENSBSLG00000017377	PRKAA2 (ENSBSLG00000017446)	PLPP3 (ENSBSLG00000017501)	bloc1s2 (ENSBSLG00000017598)	PCSK9 (ENSBSLG00000017686)	ENSBSLG00000017737	dhcr24 (ENSBSLG00000017747)	ENSBSLG00000017872	slc35d1a (ENSBSLG00000017891)	aqp12 (ENSBSLG00000018024) #22	rpp21 (ENSBSLG00000018031)	pak2b (ENSBSLG00000018068)	pigx (ENSBSLG00000018094)	cep19 (ENSBSLG00000018108)	ing5a (ENSBSLG00000018114)	plekhb2 (ENSBSLG00000018130)	VPS4B (ENSBSLG00000018244)	ankrd29 (ENSBSLG00000018697)	ENSBSLG00000018720	OSBPL1A (ENSBSLG00000019226)	impact (ENSBSLG00000019432)	ENSBSLG00000019560	tgm1l4 (ENSBSLG00000019604)	rabggta (ENSBSLG00000019746)	ENSBSLG00000020029
Carangaria	ANCESTRAL SPECIES	7	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Pleuronectoidei	ANCESTRAL SPECIES	29	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000174833	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121	ENSGT00940000177341
Turbot	MODERN SPECIES	3	tmed5 (ENSSMAG00000017051)	ENSSMAG00000016999	ENSSMAG00000035521	mysm1 (ENSSMAG00000016977)	ENSSMAG00000016970	dab1a (ENSSMAG00000016830)	PRKAA2 (ENSSMAG00000016792)	PLPP3 (ENSSMAG00000016768)	bloc1s2 (ENSSMAG00000016751)	USP24 (ENSSMAG00000016614)	PCSK9 (ENSSMAG00000016575)	ENSSMAG00000016547	dhcr24 (ENSSMAG00000016513)	ENSSMAG00000031321	ENSSMAG00000016476	ENSSMAG00000016448 #22	ENSSMAG00000016466	pak2b (ENSSMAG00000016369)	pigx (ENSSMAG00000016350)	cep19 (ENSSMAG00000016332)	ing5a (ENSSMAG00000016308)	plekhb2 (ENSSMAG00000016299)	ENSSMAG00000016263	ankrd29 (ENSSMAG00000016253)	ENSSMAG00000016249	ENSSMAG00000015143	ENSSMAG00000015772	ENSSMAG00000015174	ENSSMAG00000037916	ENSSMAG00000015090	ENSSMAG00000014992
Tongue sole	MODERN SPECIES	11	dab1a (ENSCSEG00000004318)	ENSCSEG00000004286	mysm1 (ENSCSEG00000004281)	ENSCSEG00000004263	tmed5 (ENSCSEG00000004256)	pigc (ENSCSEG00000004253)	ENSCSEG00000004252	mettl13 (ENSCSEG00000004233)	itpa (ENSCSEG00000004220)	rangrf (ENSCSEG00000004216)	vamp4 (ENSCSEG00000004192)	myoc (ENSCSEG00000004179)	PRRC2C (ENSCSEG00000004150)	si:dkey-239i20.2 (ENSCSEG00000004139)	rpp21 (ENSCSEG00000004131)	aqp12 (ENSCSEG00000004129) #22	pak2b (ENSCSEG00000004105)	pigx (ENSCSEG00000004102)	cep19 (ENSCSEG00000004101)	ing5a (ENSCSEG00000004094)	plekhb2 (ENSCSEG00000004089)	ENSCSEG00000004023	ankrd29 (ENSCSEG00000004012)	ENSCSEG00000003889	OSBPL1A (ENSCSEG00000003872)	impact (ENSCSEG00000003856)	ENSCSEG00000003851	TGM1 (ENSCSEG00000003837)	rabggta (ENSCSEG00000003822)	ENSCSEG00000003794	nrl (ENSCSEG00000003788)
Carangaria_A	ANCESTRAL SPECIES	3	ENSGT00940000155468	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00940000167019	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b
Seriola	ANCESTRAL SPECIES	39	ENSGT00390000013502.a.a	ENSGT00940000157721	ENSGT00390000007027	ENSGT00940000178674	ENSGT00940000158038.c.a	ENSGT00940000156945	ENSGT00940000156450.c	ENSGT00390000005889	ENSGT00940000159474	ENSGT00490000043472	ENSGT01050000245013	ENSGT00610000087472	ENSGT00390000008338	ENSGT00390000016298.b	ENSGT00940000155665.a	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00940000155295.y	ENSGT00390000017571	ENSGT00940000163206.b.a.a	ENSGT01050000244939.a.a.b.a.b	ENSGT00550000075121
Greater amberjack	MODERN SPECIES	65		mysm1 (ENSSDUG00000022378)	OMA1 (ENSSDUG00000022386)	ENSSDUG00000022390	dab1a (ENSSDUG00000022392)	PRKAA2 (ENSSDUG00000022398)	PLPP3 (ENSSDUG00000022407)	bloc1s2 (ENSSDUG00000022420)	USP24 (ENSSDUG00000022426)	PCSK9 (ENSSDUG00000022461)	ENSSDUG00000022472	si:dkeyp-51f12.2 (ENSSDUG00000022473)	dhcr24 (ENSSDUG00000022476)	ENSSDUG00000022486	slc35d1a (ENSSDUG00000022492)	aqp12 (ENSSDUG00000022501) #22	ENSSDUG00000022502	pak2b (ENSSDUG00000022506)	pigx (ENSSDUG00000022525)	cep19 (ENSSDUG00000022531)	ing5a (ENSSDUG00000022532)	plekhb2 (ENSSDUG00000022542)	ENSSDUG00000022547	ankrd29 (ENSSDUG00000022554)	ENSSDUG00000022568	ENSSDUG00000022577	OSBPL1A (ENSSDUG00000022592)	impact (ENSSDUG00000022641)	ENSSDUG00000022653	tgm1l4 (ENSSDUG00000022656)	rabggta (ENSSDUG00000022664)
Yellowtail amberjack	MODERN SPECIES	2558											si:dkeyp-51f12.2 (ENSSLDG00000007283)	dhcr24 (ENSSLDG00000007310)	ENSSLDG00000007357	slc35d1a (ENSSLDG00000007397)	ENSSLDG00000007478	aqp12 (ENSSLDG00000007555) #22	ENSSLDG00000007583
Barramundi perch	MODERN SPECIES	117	tmed5 (ENSLCAG00010008034)	ENSLCAG00010007744	mysm1 (ENSLCAG00010007688)	ENSLCAG00010007671	ENSLCAG00010007666	dab1a (ENSLCAG00010007637)	PRKAA2 (ENSLCAG00010007593)	PLPP3 (ENSLCAG00010007582)	bloc1s2 (ENSLCAG00010007575)	USP24 (ENSLCAG00010007127)	PCSK9 (ENSLCAG00010007005)	ENSLCAG00010006999	dhcr24 (ENSLCAG00010006982)	ENSLCAG00010006976	slc35d1a (ENSLCAG00010006972)	aqp12 (ENSLCAG00010006969) #22	rpp21 (ENSLCAG00010006967)	pak2b (ENSLCAG00010006954)	pigx (ENSLCAG00010006950)	cep19 (ENSLCAG00010006948)	ing5a (ENSLCAG00010006940)	plekhb2 (ENSLCAG00010006935)	ENSLCAG00010006543	ankrd29 (ENSLCAG00010006403)	ENSLCAG00010006382	ENSLCAG00010006368	OSBPL1A (ENSLCAG00010006348)	ENSLCAG00010006340	impact (ENSLCAG00010006326)	ENSLCAG00010006322	tgm1l4 (ENSLCAG00010006307)
Pinecone sodierfish	MODERN SPECIES	18	pigc (ENSMMDG00005014471)	tmed5 (ENSMMDG00005014473)	SUCO (ENSMMDG00005014494)	mysm1 (ENSMMDG00005015745)	ENSMMDG00005015748	dab1a (ENSMMDG00005015750)	PRKAA2 (ENSMMDG00005015753)	PLPP3 (ENSMMDG00005015775)	bloc1s2 (ENSMMDG00005015777)	USP24 (ENSMMDG00005015797)	PCSK9 (ENSMMDG00005016143)	ENSMMDG00005016447	dhcr24 (ENSMMDG00005016451)	ENSMMDG00005016455	slc35d1a (ENSMMDG00005016474)	aqp12 (ENSMMDG00005016735) #22	rpp21 (ENSMMDG00005016738)	pak2b (ENSMMDG00005016772)	pigx (ENSMMDG00005018133)	cep19 (ENSMMDG00005018134)	ing5a (ENSMMDG00005018138)	plekhb2 (ENSMMDG00005018141)	ENSMMDG00005018186	ankrd29 (ENSMMDG00005019676)	ENSMMDG00005019677	ttc39c (ENSMMDG00005019682)	OSBPL1A (ENSMMDG00005019724)	impact (ENSMMDG00005021118)	ENSMMDG00005021123	tgm1l4 (ENSMMDG00005021132)	rabggta (ENSMMDG00005021155)
Cod	MODERN SPECIES	3	dab1a (ENSGMOG00000007820)	ENSGMOG00000032376	PRKAA2 (ENSGMOG00000007817)	ENSGMOG00000032385	ENSGMOG00000035930	ENSGMOG00000028631	ENSGMOG00000030104	bloc1s2 (ENSGMOG00000016397)	ENSGMOG00000016350	dhcr24 (ENSGMOG00000019216)	ENSGMOG00000019191	ENSGMOG00000028767	ENSGMOG00000019178	ENSGMOG00000029872	ENSGMOG00000036892	ENSGMOG00000032886 #22	ENSGMOG00000027024	pak2b (ENSGMOG00000019155)	pigx (ENSGMOG00000019129)	cep19 (ENSGMOG00000019124)	ing5a (ENSGMOG00000019113)	plekhb2 (ENSGMOG00000019108)	ENSGMOG00000019097	ENSGMOG00000019002	ENSGMOG00000015255	ENSGMOG00000019091	ENSGMOG00000019082	ENSGMOG00000019014	ENSGMOG00000019009	ENSGMOG00000010861	lmnb2 (ENSGMOG00000010869)
Protacanthopterygii	ANCESTRAL SPECIES	13												ENSGT00940000155297.hb.b	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b #15	ENSGT01050000244955.b.c	ENSGT00530000063816.d #22	ENSGT00390000003020	ENSGT00950000182988.a.a.b	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159	ENSGT00390000013989.a	ENSGT00940000154973.a.b	ENSGT00940000153902.a	ENSGT00940000153321.b.a	ENSGT00940000155638.wb.b	ENSGT00950000182917.b.a.b	ENSGT00990000204641.b	ENSGT00940000155295.y	ENSGT00940000165304	ENSGT00980000201079
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	11												ENSGT00940000155297.hb.b.b	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b.a #15	ENSGT01050000244955.b.c.c	ENSGT00530000063816.d.m #22	ENSGT00390000003020.d	ENSGT00950000182988.a.a.b.i	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159.d	ENSGT00390000013989.a.n	ENSGT00940000154973.a.b.a	ENSGT00940000153902.a.f	ENSGT00940000153321.b.a.n.a	ENSGT00950000182917.b.a.b.e	ENSGT00990000204641.b.a	ENSGT00940000155295.y.i	ENSGT00940000165304.d.b	ENSGT00980000201079	ENSGT00950000182916.b.e
Huchen	MODERN SPECIES	1921													ENSHHUG00000008165 #16	gpc1a (ENSHHUG00000008219) #15	gpc5b (ENSHHUG00000008227)	aqp12 (ENSHHUG00000008228) #22	rpp21 (ENSHHUG00000008230)	ENSHHUG00000008238
Salmoninae_a	ANCESTRAL SPECIES	22	ENSGT00940000164186.a	ENSGT00950000182913.B.f.f	ENSGT00950000182976.b.a.d	ENSGT00940000156262.y	ENSGT00960000186843	ENSGT00940000156968.o	ENSGT00940000154384	ENSGT00950000183189.a.b.a.k	ENSGT00390000013701.t	ENSGT00940000160141.e.b.a	ENSGT00990000204094.c.b	ENSGT00940000155297.hb.b.b	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b.a #15	ENSGT01050000244955.b.c.c	ENSGT00530000063816.d.m #22	ENSGT00390000003020.d	ENSGT00950000182988.a.a.b.i	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159.d	ENSGT00390000013989.a.n	ENSGT00940000154973.a.b.a	ENSGT00940000153902.a.f	ENSGT00940000153321.b.a.n.a	ENSGT00950000182917.b.a.b.e	ENSGT00990000204641.b.a	ENSGT00940000155295.y.i	ENSGT00940000165304.d.b	ENSGT00980000201079	ENSGT00950000182916.b.e
Salmo	ANCESTRAL SPECIES	14	ENSGT00940000164186.a	ENSGT00950000182913.B.f.f	ENSGT00950000182976.b.a.d	ENSGT00940000156262.y	ENSGT00960000186843	ENSGT00940000156968.o	ENSGT00940000154384	ENSGT00950000183189.a.b.a.k	ENSGT00390000013701.t	ENSGT00940000160141.e.b.a	ENSGT00990000204094.c.b	ENSGT00940000155297.hb.b.b	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b.a #15	ENSGT01050000244955.b.c.c	ENSGT00530000063816.d.m #22	ENSGT00390000003020.d	ENSGT00950000182988.a.a.b.i	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159.d	ENSGT00390000013989.a.n	ENSGT00940000154973.a.b.a	ENSGT00940000153902.a.f	ENSGT00940000153321.b.a.n.a	ENSGT00950000182917.b.a.b.e	ENSGT00940000155295.y.i	ENSGT00940000165304.d.b	ENSGT00950000182916.b.e	ENSGT00390000005318.a.a.a	ENSGT01070000254699.b
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000062538	DEPDC1 (ENSSSAG00000061391)	LRRC7 (ENSSSAG00000060780)	lrrc2 (ENSSSAG00000060461)	ENSSSAG00000082201	ENSSSAG00000120735	ENSSSAG00000051511	ENSSSAG00000105616	ENSSSAG00000051296	ENSSSAG00000051282	ENSSSAG00000114736	ENSSSAG00000044376	ankmy1 (ENSSSAG00000044230) #16	gpc1a (ENSSSAG00000043895) #15	gpc5b (ENSSSAG00000103799)	ENSSSAG00000102904 #22	rpp21 (ENSSSAG00000043838)	ENSSSAG00000099543	pak2b (ENSSSAG00000041277)	pigx (ENSSSAG00000041234)	cep19 (ENSSSAG00000118536)	ing5a (ENSSSAG00000093309)	plekhb2 (ENSSSAG00000100119)	ENSSSAG00000040819	ANR29 (ENSSSAG00000089135)	ENSSSAG00000040751	ttc39c (ENSSSAG00000105654)	ENSSSAG00000115141	OSBPL1A (ENSSSAG00000039146)	ENSSSAG00000038784	ENSSSAG00000119538
River trout	MODERN SPECIES	14	depdc1a (ENSSTUG00000040140)	LRRC7 (ENSSTUG00000040027)	ENSSTUG00000039945	ENSSTUG00000039939	lrrc40 (ENSSTUG00000039866)	ENSSTUG00000039840	dnajc19 (ENSSTUG00000039802)	fxr1 (ENSSTUG00000037446)	ttc14 (ENSSTUG00000037083)	LRRC24 (ENSSTUG00000037062)	ENSSTUG00000037051	EPHB1 (ENSSTUG00000036005)	ENSSTUG00000035958 #16	gpc1a (ENSSTUG00000035823) #15	gpc5b (ENSSTUG00000035807)	aqp12 (ENSSTUG00000035798) #22	rpp21 (ENSSTUG00000035790)	ENSSTUG00000035783	pak2b (ENSSTUG00000035291)	pigx (ENSSTUG00000035258)	cep19 (ENSSTUG00000035252)	ing5a (ENSSTUG00000045587)	plekhb2 (ENSSTUG00000045574)	VPS4B (ENSSTUG00000045358)	ankrd29 (ENSSTUG00000045317)	ttc39c (ENSSTUG00000045217)	dohh (ENSSTUG00000045203)	OSBPL1A (ENSSTUG00000045004)	ENSSTUG00000044896	MFSD12 (ENSSTUG00000044667)	ENSSTUG00000044653
Oncorhynchus	ANCESTRAL SPECIES	8	ENSGT00950000183047.c.b.h	ENSGT00940000164186.a	ENSGT00950000182913.B.f.f	ENSGT00950000182976.b.a.d	ENSGT00940000156262.y	ENSGT00940000156968.o	ENSGT00950000183189.a.b.a.k.a	ENSGT00940000154384	ENSGT00950000183189.a.b.a.k.b.b	ENSGT00940000160141.e.b.a	ENSGT00990000204094.c.b	ENSGT00940000155297.hb.b.b	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b.a #15	ENSGT01050000244955.b.c.c	ENSGT00530000063816.d.m #22	ENSGT00390000003020.d	ENSGT00950000182988.a.a.b.i	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159.d	ENSGT00390000013989.a.n	ENSGT00940000154973.a.b.a	ENSGT00940000153902.a.f	ENSGT00940000153321.b.a.n.a	ENSGT00950000182917.b.a.b.e	ENSGT00990000204641.b.a	ENSGT00940000155295.y.i	ENSGT00940000165304.d.b	ENSGT00980000201079	ENSGT00950000182916.b.e
Rainbow trout	MODERN SPECIES	26	depdc1a (ENSOMYG00000015417)	ENSOMYG00000075779	LRRC7 (ENSOMYG00000015364)	LRRC40 (ENSOMYG00000015333)	ENSOMYG00000015299	ENSOMYG00000014274	ENSOMYG00000062422	ENSOMYG00000059700	ENSOMYG00000075544	ENSOMYG00000014127	ENSOMYG00000013852	ENSOMYG00000013782 #16	gpc1a (ENSOMYG00000013713) #15	ENSOMYG00000068930	gpc5b (ENSOMYG00000013692)	ENSOMYG00000013685 #22	ENSOMYG00000052220	pak2b (ENSOMYG00000013013)	pigx (ENSOMYG00000077222)	cep19 (ENSOMYG00000012916)	ing5a (ENSOMYG00000012904)	ENSOMYG00000012887	ENSOMYG00000012845	ANKRD29 (ENSOMYG00000012815)	TTC39C (ENSOMYG00000012583)	ENSOMYG00000012529	OSBPL1A (ENSOMYG00000012354)	ENSOMYG00000062768	dohh (ENSOMYG00000012518)	ENSOMYG00000012314	ENSOMYG00000012222
Oncorhynchus_a	ANCESTRAL SPECIES	14	ENSGT00940000164186.a	ENSGT00950000182913.B.f.f	ENSGT00950000182976.b.a.d	ENSGT00940000156262.y	ENSGT00940000156968.o	ENSGT00950000183189.a.b.a.k.a	ENSGT00940000154384	ENSGT00950000183189.a.b.a.k.b.a	ENSGT00940000180153	ENSGT00940000160141.e.b.a	ENSGT00990000204094.c.b	ENSGT00940000155297.hb.b.b	ENSGT00460000041630 #16	ENSGT01050000244897.a.a.b.b.a #15	ENSGT01050000244955.b.c.c	ENSGT00530000063816.d.m #22	ENSGT00390000003020.d	ENSGT00950000182988.a.a.b.i	ENSGT00390000017679	ENSGT00390000016356	ENSGT00940000158159.d	ENSGT00390000013989.a.n	ENSGT00940000154973.a.b.a	ENSGT00940000153902.a.f	ENSGT00940000153321.b.a.n.a	ENSGT00950000182917.b.a.b.e	ENSGT00990000204641.b.a	ENSGT00940000155295.y.i	ENSGT00940000165304.d.b	ENSGT00980000201079	ENSGT00950000182916.b.e
Coho salmon	MODERN SPECIES	4	depdc1a (ENSOKIG00005033179)	LRRC7 (ENSOKIG00005033328)	ENSOKIG00005033541	lrrc40 (ENSOKIG00005033596)	ENSOKIG00005034048	dnajc19 (ENSOKIG00005034062)	fxr1 (ENSOKIG00005034123)	ENSOKIG00005034304	LRRC24 (ENSOKIG00005034351)	ENSOKIG00005034359	EPHB1 (ENSOKIG00005034400)	ENSOKIG00005034896	ENSOKIG00005034923 #16	gpc1a (ENSOKIG00005034952) #15	gpc5b (ENSOKIG00005035079)	ENSOKIG00005035097 #22	RPP21 (ENSOKIG00005035109)	PAK2 (ENSOKIG00005035217)	cep19 (ENSOKIG00005035826)	pigx (ENSOKIG00005035834)	ENSOKIG00005035851	plekhb2 (ENSOKIG00005035902)	VPS4B (ENSOKIG00005035927)	ankrd29 (ENSOKIG00005036180)	ttc39c (ENSOKIG00005036231)	ENSOKIG00005036771	OSBPL1A (ENSOKIG00005036938)	dohh (ENSOKIG00005039490)	ENSOKIG00005039510	ENSOKIG00005039549	MFSD12 (ENSOKIG00005039690)
Chinook salmon	MODERN SPECIES	29	ENSOTSG00005029746	ENSOTSG00005029748	ENSOTSG00005029750	OSBPL1A (ENSOTSG00005029758)	ENSOTSG00005030504	ttc39c (ENSOTSG00005030507)	pigx (ENSOTSG00005030510)	cep19 (ENSOTSG00005030512)	ing5a (ENSOTSG00005030517)	plekhb2 (ENSOTSG00005030518)	ENSOTSG00005030525	ankrd29 (ENSOTSG00005030632)	ENSOTSG00005030636	ENSOTSG00005030643	rpp21 (ENSOTSG00005031059)	aqp12 (ENSOTSG00005031060) #22	gpc5b (ENSOTSG00005031061)	ENSOTSG00005031062 #16	gpc1a (ENSOTSG00005031065) #15	ENSOTSG00005031068	ENSOTSG00005031069	ENSOTSG00005031070	LRRC24 (ENSOTSG00005031071)	ttc14 (ENSOTSG00005031072)	fxr1 (ENSOTSG00005031073)	dnajc19 (ENSOTSG00005031074)	fxr1 (ENSOTSG00005031076)	sox2 (ENSOTSG00005031077)	lrrc40 (ENSOTSG00005031078)	ENSOTSG00005031265	nfil3-4 (ENSOTSG00005031267)
Salmoninae	ANCESTRAL SPECIES	55													ENSGT00940000155297.hb.b.a	ENSGT01050000244897.a.a.b.b.b #15	ENSGT01050000244955.b.c.d	ENSGT00530000063816.d.n #22	ENSGT00390000003020.c	ENSGT00950000182988.a.a.b.j	ENSGT00940000158159.c	ENSGT00390000013989.a.m	ENSGT00940000154973.a.b.b	ENSGT00940000153902.a.e	ENSGT00940000153321.b.a.n.b	ENSGT00940000155638.wb.b	ENSGT00950000182917.b.a.b.f	ENSGT00990000204641.b.b	ENSGT00940000155295.y.j	ENSGT00940000165304.d.a	ENSGT00950000182916.b.f	ENSGT00940000156470.u.a.d	ENSGT00940000155505.b.e
Salmoninae_a	ANCESTRAL SPECIES	9	ENSGT00940000154130.a.a.b.n	ENSGT00950000183047.c.b.g	ENSGT00950000182913.B.f.e	ENSGT00950000182976.b.a.c	ENSGT00940000156262.z	ENSGT00940000156968.p	ENSGT00940000160614.j	ENSGT00950000183189.a.b.a.l	ENSGT00390000013701.s	ENSGT00980000203290	ENSGT00940000160141.e.b.b	ENSGT00940000154507.t	ENSGT00940000155297.hb.b.a	ENSGT01050000244897.a.a.b.b.b #15	ENSGT01050000244955.b.c.d	ENSGT00530000063816.d.n #22	ENSGT00390000003020.c	ENSGT00950000182988.a.a.b.j	ENSGT00940000158159.c	ENSGT00390000013989.a.m	ENSGT00940000154973.a.b.b	ENSGT00940000153902.a.e	ENSGT00940000153321.b.a.n.b	ENSGT00940000155638.wb.b	ENSGT00950000182917.b.a.b.f	ENSGT00990000204641.b.b	ENSGT00940000155295.y.j	ENSGT00940000165304.d.a	ENSGT00950000182916.b.f	ENSGT00940000156470.u.a.d	ENSGT00940000155505.b.e
Salmo	ANCESTRAL SPECIES	20	ENSGT00950000183047.c.b.g	ENSGT00950000182913.B.f.e	ENSGT00950000182976.b.a.c	ENSGT00940000156262.z	ENSGT00940000156968.p	ENSGT00940000160614.j	ENSGT00950000183189.a.b.a.l	ENSGT00390000013701.s	ENSGT00980000203290	ENSGT00940000160141.e.b.b	ENSGT00940000154507.t	ENSGT00940000155297.hb.b.a	ENSGT01050000244897.a.a.b.b.b #15	ENSGT01050000244955.b.c.d	ENSGT00390000003020.c	ENSGT00530000063816.d.n #22	ENSGT00950000182988.a.a.b.j	ENSGT00940000158159.c	ENSGT00390000013989.a.m	ENSGT00940000154973.a.b.b	ENSGT00940000153902.a.e	ENSGT00940000153321.b.a.n.b	ENSGT00940000155638.wb.b	ENSGT00950000182917.b.a.b.f	ENSGT00990000204641.b.b	ENSGT00940000155295.y.j	ENSGT00940000165304.d.a	ENSGT00950000182916.b.f	ENSGT00940000156470.u.a.d	ENSGT00940000155505.b.e	ENSGT00940000165897.d
River trout	MODERN SPECIES	33	bcar3 (ENSSTUG00000019270)	fnbp1l (ENSSTUG00000019335)	RPE65 (ENSSTUG00000019395)	depdc1a (ENSSTUG00000019684)	LRRC7 (ENSSTUG00000019742)	ENSSTUG00000020057	lrrc40 (ENSSTUG00000020074)	ttc14 (ENSSTUG00000020135)	LRRC24 (ENSSTUG00000020186)	ENSSTUG00000020199	EPHB1 (ENSSTUG00000020230)	gpc1a (ENSSTUG00000020640) #15	gpc5b (ENSSTUG00000020690)	ENSSTUG00000020748	rpp21 (ENSSTUG00000020755)	aqp12 (ENSSTUG00000020780) #22	pak2b (ENSSTUG00000020803)	ing5a (ENSSTUG00000021215)	plekhb2 (ENSSTUG00000021305)	ENSSTUG00000021321	ankrd29 (ENSSTUG00000021353)	ENSSTUG00000021378	ENSSTUG00000021389	ttc39c (ENSSTUG00000021421)	ENSSTUG00000021712	OSBPL1A (ENSSTUG00000021734)	dohh (ENSSTUG00000022045)	ENSSTUG00000022062	ENSSTUG00000022183	csnk1g2b (ENSSTUG00000022202)	zgc:101100 (ENSSTUG00000022852)
Atlantic salmon	MODERN SPECIES	15	DEPDC1 (ENSSSAG00000011177)	LRRC7 (ENSSSAG00000012965)	ENSSSAG00000040989	ENSSSAG00000041043	ENSSSAG00000084166	ENSSSAG00000085029	sox2 (ENSSSAG00000088464)	ENSSSAG00000118997	ttc14 (ENSSSAG00000041099)	ENSSSAG00000041164	ENSSSAG00000041180	ephb1 (ENSSSAG00000041250)	gpc1a (ENSSSAG00000042394) #15	gpc5b (ENSSSAG00000043871)	ENSSSAG00000086964	ENSSSAG00000101423 #22	ENSSSAG00000082107	ENSSSAG00000042555	ENSSSAG00000041114	ENSSSAG00000044949	ENSSSAG00000044992	ankrd29 (ENSSSAG00000086124)	ENSSSAG00000045684	ENSSSAG00000045692	ttc39c (ENSSSAG00000108341)	ENSSSAG00000046495	dohh (ENSSSAG00000049052)	ENSSSAG00000109617	csnk1g2b (ENSSSAG00000049477)	zgc:101100 (ENSSSAG00000082428)	rexo1 (ENSSSAG00000055373)
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000165232.g	ENSGT00940000154130.a.a.b.n	ENSGT00950000183047.c.b.g	ENSGT00950000182913.B.f.e	ENSGT00950000182976.b.a.c	ENSGT00940000156262.z	ENSGT00940000156968.p	ENSGT00950000183189.a.b.a.l	ENSGT00390000013701.s	ENSGT00980000203290	ENSGT00940000160141.e.b.b	ENSGT00940000154507.t	ENSGT00940000155297.hb.b.a	ENSGT01050000244897.a.a.b.b.b #15	ENSGT01050000244955.b.c.d	ENSGT00530000063816.d.n #22	ENSGT00390000003020.c	ENSGT00950000182988.a.a.b.j	ENSGT00940000158159.c	ENSGT00390000013989.a.m	ENSGT00940000154973.a.b.b	ENSGT00940000153902.a.e	ENSGT00940000153321.b.a.n.b	ENSGT00940000155638.wb.b	ENSGT00950000182917.b.a.b.f	ENSGT00990000204641.b.b	ENSGT00940000155295.y.j	ENSGT00940000165304.d.a	ENSGT00950000182916.b.f	ENSGT00940000156470.u.a.d	ENSGT00940000155505.b.e
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000165232.g	ENSGT00940000154130.a.a.b.n	ENSGT00950000183047.c.b.g	ENSGT00950000182913.B.f.e	ENSGT00950000182976.b.a.c	ENSGT00940000156262.z	ENSGT00940000156968.p	ENSGT00950000183189.a.b.a.l	ENSGT00390000013701.s	ENSGT00980000203290	ENSGT00940000160141.e.b.b	ENSGT00940000154507.t	ENSGT00940000155297.hb.b.a	ENSGT01050000244897.a.a.b.b.b #15	ENSGT01050000244955.b.c.d	ENSGT00530000063816.d.n #22	ENSGT00390000003020.c	ENSGT00950000182988.a.a.b.j	ENSGT00940000158159.c	ENSGT00390000013989.a.m	ENSGT00940000154973.a.b.b	ENSGT00940000153902.a.e	ENSGT00940000153321.b.a.n.b	ENSGT00940000155638.wb.b	ENSGT00950000182917.b.a.b.f	ENSGT00990000204641.b.b	ENSGT00940000155295.y.j	ENSGT00940000165304.d.a	ENSGT00950000182916.b.f	ENSGT00940000156470.u.a.d	ENSGT00940000155505.b.e
Coho salmon	MODERN SPECIES	1	ENSOKIG00005045956	DEPDC1 (ENSOKIG00005045926)	LRRC7 (ENSOKIG00005045795)	LRRC40 (ENSOKIG00005045734)	ENSOKIG00005045700	ttc14 (ENSOKIG00005045600)	ENSOKIG00005045586	LRRC24 (ENSOKIG00005045578)	ENSOKIG00005045564	ENSOKIG00005045556	ENSOKIG00005045550	EPHB1 (ENSOKIG00005045460)	ENSOKIG00005045424	gpc1a (ENSOKIG00005045403) #15	gpc5b (ENSOKIG00005045379)	aqp12 (ENSOKIG00005045372) #22	rpp21 (ENSOKIG00005045364)	pak2b (ENSOKIG00005045291)	ing5a (ENSOKIG00005045202)	plekhb2 (ENSOKIG00005045179)	ENSOKIG00005045126	ankrd29 (ENSOKIG00005045107)	ENSOKIG00005045099	ttc39c (ENSOKIG00005044915)	ENSOKIG00005044892	OSBPL1A (ENSOKIG00005044602)	dohh (ENSOKIG00005044565)	ENSOKIG00005044560	ENSOKIG00005044512	csnk1g2b (ENSOKIG00005044273)	zgc:101100 (ENSOKIG00005044246)
Chinook salmon	MODERN SPECIES		bend5 (ENSOTSG00005023801)	AGBL4 (ENSOTSG00005023799)	dnttip2 (ENSOTSG00005023798)	gclm (ENSOTSG00005023797)	zgc:171480 (ENSOTSG00005023796)	bcar3 (ENSOTSG00005023225)	LRRC7 (ENSOTSG00005023156)	lrrc40 (ENSOTSG00005023153)	fxr1 (ENSOTSG00005023147)	ttc14 (ENSOTSG00005023142)	ENSOTSG00005023140	LRRC24 (ENSOTSG00005023139)	ENSOTSG00005023138	EPHB1 (ENSOTSG00005022087)	gpc5b (ENSOTSG00005022063)	aqp12 (ENSOTSG00005022055) #22	rpp21 (ENSOTSG00005022052)	ENSOTSG00005022049	pak2b (ENSOTSG00005022019)	ing5a (ENSOTSG00005022017)	ENSOTSG00005022015	plekhb2 (ENSOTSG00005022014)	ENSOTSG00005022012	ankrd29 (ENSOTSG00005022010)	ENSOTSG00005022008	ENSOTSG00005022006	ENSOTSG00005022004	OSBPL1A (ENSOTSG00005019172)	dohh (ENSOTSG00005019136)	ENSOTSG00005019135	ENSOTSG00005019134
Rainbow trout	MODERN SPECIES	22	RPE65 (ENSOMYG00000027040)	ENSOMYG00000026674	ENSOMYG00000055547	LRRC7 (ENSOMYG00000026410)	ENSOMYG00000057336	ENSOMYG00000026170	ENSOMYG00000025899	ENSOMYG00000025802	ENSOMYG00000025794	ENSOMYG00000025776	ENSOMYG00000012367	ENSOMYG00000068701	ENSOMYG00000023572	ENSOMYG00000064696	gpc1a (ENSOMYG00000022966) #15	ENSOMYG00000022904 #22	ENSOMYG00000022895	ENSOMYG00000021235	ENSOMYG00000021002	plekhb2 (ENSOMYG00000020988)	ENSOMYG00000020955	ankrd29 (ENSOMYG00000020936)	ENSOMYG00000020915	ENSOMYG00000020903	ttc39c (ENSOMYG00000020822)	ENSOMYG00000020766	ENSOMYG00000017953	dohh (ENSOMYG00000017731)	ENSOMYG00000054204	ENSOMYG00000017718	ENSOMYG00000068827
Huchen	MODERN SPECIES	116														gpc1a (ENSHHUG00000022081) #15	ENSHHUG00000022105	aqp12 (ENSHHUG00000022119) #22	ENSHHUG00000022122	pak2b (ENSHHUG00000022130)	ing5a (ENSHHUG00000022198)	plekhb2 (ENSHHUG00000022254)	ENSHHUG00000022279	ankrd29 (ENSHHUG00000022324)	ENSHHUG00000022331	ENSHHUG00000022339	ENSHHUG00000022373	ttc39c (ENSHHUG00000022377)	ENSHHUG00000022405	OSBPL1A (ENSHHUG00000022411)	ENSHHUG00000022566	dohh (ENSHHUG00000022574)	ENSHHUG00000022579
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	7	ENSELUG00000031224	ENSELUG00000031581	ENSELUG00000010876	hdlbpa (ENSELUG00000010700) #32	FARP2 (ENSELUG00000010836) #34	ENSELUG00000020344	ENSELUG00000030844	ENSELUG00000020390	lpar3 (ENSELUG00000020400)	rpp21 (ENSELUG00000012638)	ENSELUG00000030996	ENSELUG00000000948	aqp12 (ENSELUG00000034091) #22	ENSELUG00000030229	ENSELUG00000027382	aqp12 (ENSELUG00000027785) #22	uox (ENSELUG00000001112)	negr1 (ENSELUG00000034699)	adgrl4 (ENSELUG00000018920)	ENSELUG00000029097	ENSELUG00000027741
Northern pike	MODERN SPECIES	7								ENSELUG00000027741	ENSELUG00000029097	adgrl4 (ENSELUG00000018920)	negr1 (ENSELUG00000034699)	uox (ENSELUG00000001112)	aqp12 (ENSELUG00000027785) #22	ENSELUG00000027382	ENSELUG00000030229	aqp12 (ENSELUG00000034091) #22	ENSELUG00000000948	ENSELUG00000030996	rpp21 (ENSELUG00000012638)	lpar3 (ENSELUG00000020400)	ENSELUG00000020390	ENSELUG00000030844	ENSELUG00000020344	FARP2 (ENSELUG00000010836) #34	hdlbpa (ENSELUG00000010700) #32	ENSELUG00000010876	ENSELUG00000031581	ENSELUG00000031224	sox14 (ENSELUG00000001694)	ENSELUG00000027589	ENSELUG00000016284
Spotted gar	MODERN SPECIES	652	COPS7B (ENSLOCG00000005891)	PRSS56 (ENSLOCG00000005875)	chrnd (ENSLOCG00000005860)	chrng (ENSLOCG00000005837)	ENSLOCG00000005816	eif4e2 (ENSLOCG00000005798)	CAPN10 (ENSLOCG00000005781) #19	ENSLOCG00000005763	ENSLOCG00000005742	ENSLOCG00000017398	EPHB1 (ENSLOCG00000005723)	ENSLOCG00000005715	ANKMY1 (ENSLOCG00000005693) #16	gpc1a (ENSLOCG00000005673) #15	gpc5b (ENSLOCG00000005644)	aqp12 (ENSLOCG00000005627) #22	rpp21 (ENSLOCG00000005595)	pak2b (ENSLOCG00000005574)	ENSLOCG00000005556	scly (ENSLOCG00000005534)	ESPNL (ENSLOCG00000005522)	KLHL30 (ENSLOCG00000005505)	ENSLOCG00000005485	SNED1 (ENSLOCG00000005458) #27	ryk (ENSLOCG00000005432)	SLCO2A1 (ENSLOCG00000005400)	aire (ENSLOCG00000005382)	im:7152348 (ENSLOCG00000005370)	INPP5D (ENSLOCG00000005346)	GPR17 (ENSLOCG00000017397)	ENSLOCG00000005313
Reedfish	MODERN SPECIES	131										ENSECRG00000016558	ilkap (ENSECRG00000016506)	polr2d (ENSECRG00000016479)	sft2d3 (ENSECRG00000016463)	WDR33 (ENSECRG00000016304)	ENSECRG00000016236	ENSECRG00000016190 #22	gpc5b (ENSECRG00000016168)
Elephant shark	MODERN SPECIES	1486	hdlbpa (ENSCMIG00000012422) #32	ANO7 (ENSCMIG00000012467) #31	ppp1r7 (ENSCMIG00000012492)	ENSCMIG00000012500 #29	ENSCMIG00000012505 #29	mterf4 (ENSCMIG00000012508) #28	sap130a (ENSCMIG00000012591)	AMMECR1L (ENSCMIG00000012771)	ENSCMIG00000012885	lims2 (ENSCMIG00000013338)	GPR17 (ENSCMIG00000013558)	WDR33 (ENSCMIG00000013577)	polr2d (ENSCMIG00000013621)	ENSCMIG00000013640	PAK2 (ENSCMIG00000013716)	AQP12A (ENSCMIG00000013867) #22	ENSCMIG00000013878	SMCO1 (ENSCMIG00000013882)	ENSCMIG00000013886	ubxn7 (ENSCMIG00000013916)	ENSCMIG00000013960	ENSCMIG00000013966	stk25a (ENSCMIG00000013970) #35	boka (ENSCMIG00000013980) #36	THAP4 (ENSCMIG00000013983) #37	atg4b (ENSCMIG00000013996)	dtymk (ENSCMIG00000014020)	ing5a (ENSCMIG00000014024)	d2hgdh (ENSCMIG00000014042)	fbxo45 (ENSCMIG00000014055)	ENSCMIG00000014058
Vertebrata	ANCESTRAL SPECIES	563																ENSGT00530000063816.c ##22	ENSGT00390000010063
Gnathostomata	ANCESTRAL SPECIES	1281																ENSGT00530000063816.c ##22	ENSGT00390000010063
Euteleostomi	ANCESTRAL SPECIES	335											ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000166878	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762
Actinopterygii	ANCESTRAL SPECIES	5	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00940000159782	ENSGT00390000015655.a	ENSGT00940000165121	ENSGT00940000158132	ENSGT00390000018904	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497	ENSGT00940000156536.e.a	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.a	ENSGT00390000013989.b
Neopterygii	DUPLICATION
Neopterygii	ANCESTRAL SPECIES																	ENSGT00530000063816.c.a ##22
Osteoglossocephalai	ANCESTRAL SPECIES	12	ENSGT01030000234886	ENSGT00940000155677.b	ENSGT00440000039469	ENSGT00390000004663	ENSGT00940000157765	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b
Clupeocephala	ANCESTRAL SPECIES	10	ENSGT00940000155677.b	ENSGT00440000039469	ENSGT00390000004663	ENSGT00940000157765	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b
Euteleosteomorpha	ANCESTRAL SPECIES	254	ENSGT00530000063405.b.f	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT01030000234886.e.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22
Acanthomorphata	ANCESTRAL SPECIES	14	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01030000234886.e.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c
Euacanthomorphacea	ANCESTRAL SPECIES	19	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01030000234886.e.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Percomorphaceae	ANCESTRAL SPECIES	40	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Eupercaria	ANCESTRAL SPECIES	26	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Tetraodontidae	ANCESTRAL SPECIES	57	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01090000260061.c.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b.j	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a
Fugu	MODERN SPECIES	6	ncam1a (ENSTRUG00000002966)	cadm1a (ENSTRUG00000012483)	sc5d (ENSTRUG00000012442)	ENSTRUG00000012392	TECTA (ENSTRUG00000012236)	ENSTRUG00000012109	ENSTRUG00000027293	CRK (ENSTRUG00000011971)	ywhae2 (ENSTRUG00000030321)	gria4b (ENSTRUG00000011517)	elmod1 (ENSTRUG00000011350)	slc35f2 (ENSTRUG00000011198)	cul5a (ENSTRUG00000010860)	CAPN5 (ENSTRUG00000010580)	ompb (ENSTRUG00000024676)	ENSTRUG00000010002 ##22	ENSTRUG00000009902	FCHSD2 (ENSTRUG00000009588)	foxred1 (ENSTRUG00000009457)	kcnj1b (ENSTRUG00000009385)	ENSTRUG00000009343	rabep1 (ENSTRUG00000009248)	mpzl1l (ENSTRUG00000009115)	ndfip1l (ENSTRUG00000008999)	endou2 (ENSTRUG00000008965)	rnf14 (ENSTRUG00000008815)	hspa4a (ENSTRUG00000008366)	zcchc10 (ENSTRUG00000023781)	AFF4 (ENSTRUG00000008087)	ENSTRUG00000020132	SOWAHA (ENSTRUG00000033404)
Eupecaria_A	ANCESTRAL SPECIES	25	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Ballan wrasse	MODERN SPECIES	273													CAPN5 (ENSLBEG00000025315)	MYO7A (ENSLBEG00000025398)	GDPD4 (ENSLBEG00000025490)	AQP11 (ENSLBEG00000025513) ##22	ENSLBEG00000025539	FCHSD2 (ENSLBEG00000025605)	ENSLBEG00000025639	foxred1 (ENSLBEG00000025655)	kcnj1b (ENSLBEG00000025676)	ENSLBEG00000025688	ENSLBEG00000025701	rabep1 (ENSLBEG00000025724)	mpzl1l (ENSLBEG00000025782)	ENSLBEG00000025799	emsy (ENSLBEG00000025814)	ENSLBEG00000025882	tlcd5b (ENSLBEG00000025986)	rcc1l (ENSLBEG00000026004)	castor2 (ENSLBEG00000026038)
Eupecaria_B	ANCESTRAL SPECIES	25	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Eupecaria_C	ANCESTRAL SPECIES	32	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Large yellow croaker	MODERN SPECIES	2	TBCEL (ENSLCRG00005004289)	TECTA (ENSLCRG00005004285)	ENSLCRG00005004282	ENSLCRG00005004280	ENSLCRG00005004279	CRK (ENSLCRG00005004276)	ywhae2 (ENSLCRG00005004273)	gria4b (ENSLCRG00005002153)	elmod1 (ENSLCRG00005002125)	slc35f2 (ENSLCRG00005002122)	CUL5 (ENSLCRG00005000547)	ompb (ENSLCRG00005000544)	CAPN5 (ENSLCRG00005000535)	MYO7A (ENSLCRG00005000522)	GDPD4 (ENSLCRG00005000515)	AQP11 (ENSLCRG00005000514) ##22	ENSLCRG00005000510	FCHSD2 (ENSLCRG00005000506)	foxred1 (ENSLCRG00005000484)	kcnj1b (ENSLCRG00005000480)	ENSLCRG00005000479	rabep1 (ENSLCRG00005000289)	ENSLCRG00005000220	mpzl1l (ENSLCRG00005000209)	ENSLCRG00005000201	emsy (ENSLCRG00005000172)	ENSLCRG00005000117	tlcd5b (ENSLCRG00005000100)	rcc1l (ENSLCRG00005000088)	castor2 (ENSLCRG00005015625)	DOC2B (ENSLCRG00005015574)
European seabass	MODERN SPECIES	4	ENSDLAG00005006899	ENSDLAG00005006884	ENSDLAG00005006871	ENSDLAG00005033831	ENSDLAG00005006495	ENSDLAG00005005016	elmod1 (ENSDLAG00005004868)	slc35f2 (ENSDLAG00005004826)	ENSDLAG00005029608	ENSDLAG00005030622	ompb (ENSDLAG00005030150)	CAPN5 (ENSDLAG00005004342)	MYO7A (ENSDLAG00005021005)	ENSDLAG00005020939	GDPD4 (ENSDLAG00005020922)	ENSDLAG00005029942 ##22	ENSDLAG00005020900	ENSDLAG00005020844	ENSDLAG00005020696	ENSDLAG00005020682	ENSDLAG00005020674	ENSDLAG00005020223	mpzl1l (ENSDLAG00005020196)	ENSDLAG00005020183	emsy (ENSDLAG00005020162)	ENSDLAG00005019993	ENSDLAG00005019989	rcc1l (ENSDLAG00005019919)	castor2 (ENSDLAG00005019867)	ENSDLAG00005019763	tmem248 (ENSDLAG00005019738)
Perciformes	ANCESTRAL SPECIES	26	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Cottioidei	ANCESTRAL SPECIES	70						ENSGT00940000159536	ENSGT00940000157695	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b	ENSGT00950000183064.b	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095
Lumpfish	MODERN SPECIES	5	ENSCLMG00005015300	slc22a21 (ENSCLMG00005015272)	ENSCLMG00005015125	ENSCLMG00005015119	ppm1e (ENSCLMG00005015116)	TRIM37 (ENSCLMG00005014874)	ENSCLMG00005014872	pou2f3 (ENSCLMG00005014864)	p4ha2 (ENSCLMG00005010316)	pdlim4 (ENSCLMG00005010270)	SMG8 (ENSCLMG00005010268)	KCNJ15 (ENSCLMG00005010266)	vps26c (ENSCLMG00005010264)	ENSCLMG00005010262	ENSCLMG00005010255	AQP11 (ENSCLMG00005010253) ##22	ENSCLMG00005010245	FCHSD2 (ENSCLMG00005010240)	foxred1 (ENSCLMG00005010236)	STIM1 (ENSCLMG00005008968)	dub (ENSCLMG00005008964)	guca1d (ENSCLMG00005008963)	alg8 (ENSCLMG00005008959)	ccdc90b (ENSCLMG00005008957)	pcf11 (ENSCLMG00005008955)	ncbp3 (ENSCLMG00005008952)	ENSCLMG00005008948	ENSCLMG00005008946	ENSCLMG00005008945	ENSCLMG00005008944	TRAPPC14 (ENSCLMG00005008943)
Stickleback	MODERN SPECIES	7	irf1b (ENSGACG00000020876)	slc22a4 (ENSGACG00000020875)	slc22a21 (ENSGACG00000020874)	ENSGACG00000020873	ENSGACG00000020872	KCNJ15 (ENSGACG00000020871)	SMG8 (ENSGACG00000020870)	ppm1e (ENSGACG00000020869)	ENSGACG00000020868	TRIM37 (ENSGACG00000020867)	pou2f3 (ENSGACG00000020866)	p4ha2 (ENSGACG00000020865)	pdlim4 (ENSGACG00000020864)	vps26c (ENSGACG00000020863)	ENSGACG00000020862	AQP11 (ENSGACG00000020861) ##22	ENSGACG00000020860	ENSGACG00000020859	FCHSD2 (ENSGACG00000020858)	foxred1 (ENSGACG00000020857)	ENSGACG00000020856	rabep1 (ENSGACG00000020855)	ENSGACG00000020854	emsy (ENSGACG00000020853)	ENSGACG00000020852	tlcd5b (ENSGACG00000020851)	rcc1l (ENSGACG00000020850)	castor2 (ENSGACG00000020849)	DOC2B (ENSGACG00000020848)	tmem248 (ENSGACG00000020847)	lig3 (ENSGACG00000020846)
Perciformes_a	ANCESTRAL SPECIES	28	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT01000000215988	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758
Pike perch	MODERN SPECIES	22	TECTA (ENSSLUG00000011137)	ENSSLUG00000011130	ENSSLUG00000011121	ENSSLUG00000011113	ENSSLUG00000011107	CRK (ENSSLUG00000011101)	ywhae2 (ENSSLUG00000011090)	gria4b (ENSSLUG00000010926)	elmod1 (ENSSLUG00000010894)	slc35f2 (ENSSLUG00000010876)	CUL5 (ENSSLUG00000010739)	ompb (ENSSLUG00000010701)	CAPN5 (ENSSLUG00000010588)	MYO7A (ENSSLUG00000010473)	GDPD4 (ENSSLUG00000010437)	AQP11 (ENSSLUG00000010425) ##22	ENSSLUG00000010413	FCHSD2 (ENSSLUG00000009890)	foxred1 (ENSSLUG00000009775)	kcnj1b (ENSSLUG00000009737)	ENSSLUG00000009721	rabep1 (ENSSLUG00000007194)	mpzl1l (ENSSLUG00000006930)	ENSSLUG00000006923	emsy (ENSSLUG00000006888)	ENSSLUG00000006853	tlcd5b (ENSSLUG00000006841)	rcc1l (ENSSLUG00000006830)	castor2 (ENSSLUG00000006802)	ENSSLUG00000006794	DOC2B (ENSSLUG00000006783)
Channel bull blenny	MODERN SPECIES	96												CAPN5 (ENSCGOG00000009715)	ompb (ENSCGOG00000010124)	ENSCGOG00000010126	ENSCGOG00000014902	AQP11 (ENSCGOG00000014906) ##22	ENSCGOG00000014908	ENSCGOG00000014910	foxred1 (ENSCGOG00000014919)	kcnj1b (ENSCGOG00000014942)	ENSCGOG00000014944	ENSCGOG00000014958	ENSCGOG00000014986	tlcd5b (ENSCGOG00000014991)	ENSCGOG00000015006	ENSCGOG00000015052	tlcd5b (ENSCGOG00000015134)	ENSCGOG00000015138	rcc1l (ENSCGOG00000015139)	ENSCGOG00000015212
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Carangaria	ANCESTRAL SPECIES	16	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b.f	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Seriola	ANCESTRAL SPECIES	2	ENSGT00390000013989.b.i.a	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b.f	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c.m	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Greater amberjack	MODERN SPECIES	15									elmod1 (ENSSDUG00000007392)	slc35f2 (ENSSDUG00000007412)	CUL5 (ENSSDUG00000007449)	CAPN5 (ENSSDUG00000007506)	ompb (ENSSDUG00000007534)	MYO7A (ENSSDUG00000007550)	ENSSDUG00000007655	AQP11 (ENSSDUG00000007727) ##22	ENSSDUG00000007741	FCHSD2 (ENSSDUG00000007822)	foxred1 (ENSSDUG00000007926)	kcnj1b (ENSSDUG00000007971)	ENSSDUG00000007984	rabep1 (ENSSDUG00000008003)	mpzl1l (ENSSDUG00000008060)	ENSSDUG00000008067	emsy (ENSSDUG00000008095)	ENSSDUG00000008245	tlcd5b (ENSSDUG00000008328)	rcc1l (ENSSDUG00000008345)	castor2 (ENSSDUG00000008391)	DOC2B (ENSSDUG00000008423)	tmem248 (ENSSDUG00000008448)
Yellowtail amberjack	MODERN SPECIES	3202																AQP11 (ENSSLDG00000004065) ##22	ENSSLDG00000003957	FCHSD2 (ENSSLDG00000003884)	ENSSLDG00000003849	foxred1 (ENSSLDG00000003787)	kcnj1b (ENSSLDG00000003772)	ENSSLDG00000003751	rabep1 (ENSSLDG00000003669)	mpzl1l (ENSSLDG00000003637)	ENSSLDG00000003630	emsy (ENSSLDG00000003313)	ENSSLDG00000003171	tlcd5b (ENSSLDG00000003152)	rcc1l (ENSSLDG00000003094)	castor2 (ENSSLDG00000003053)	DOC2B (ENSSLDG00000002982)
Barramundi perch	MODERN SPECIES	94	ENSLCAG00010010419	picalma (ENSLCAG00010010406)	ZPLD1 (ENSLCAG00010010390)	ENSLCAG00010010381	KIRREL3 (ENSLCAG00010010320)	ENSLCAG00010010301	akt2l (ENSLCAG00010010265)	ENSLCAG00010010259	ENSLCAG00010010258	ENSLCAG00010010256	ompb (ENSLCAG00010010254)	CAPN5 (ENSLCAG00010010238)	MYO7A (ENSLCAG00010009935)	ENSLCAG00010009855	ENSLCAG00010009852	AQP11 (ENSLCAG00010009851) ##22	ENSLCAG00010009849	FCHSD2 (ENSLCAG00010009768)	foxred1 (ENSLCAG00010009701)	kcnj1b (ENSLCAG00010009690)	ENSLCAG00010009688	ENSLCAG00010009687	rabep1 (ENSLCAG00010009583)	mpzl1l (ENSLCAG00010009553)	ENSLCAG00010009547	emsy (ENSLCAG00010009535)	ENSLCAG00010009376	tlcd5b (ENSLCAG00010009340)	rcc1l (ENSLCAG00010009331)
Pleuronectoidei	ANCESTRAL SPECIES	32	ENSGT00390000013989.b.j	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Tongue sole	MODERN SPECIES	10	ENSCSEG00000015849	TECTA (ENSCSEG00000015826)	ENSCSEG00000015810	ENSCSEG00000015801	ENSCSEG00000015789	CRK (ENSCSEG00000015777)	ENSCSEG00000015677	gria4b (ENSCSEG00000015575)	elmod1 (ENSCSEG00000015527)	slc35f2 (ENSCSEG00000015491)	CUL5 (ENSCSEG00000015456)	ompb (ENSCSEG00000015444)	CAPN5 (ENSCSEG00000015427)	MYO7A (ENSCSEG00000015251)	ENSCSEG00000015202	ENSCSEG00000015230 ##22	ENSCSEG00000015171	FCHSD2 (ENSCSEG00000015081)	foxred1 (ENSCSEG00000015059)	kcnj1b (ENSCSEG00000015056)	ENSCSEG00000015046	rabep1 (ENSCSEG00000015015)	mpzl1l (ENSCSEG00000014998)	ENSCSEG00000014996	emsy (ENSCSEG00000014978)	ENSCSEG00000014864	tlcd5b (ENSCSEG00000014847)	rcc1l (ENSCSEG00000014772)	castor2 (ENSCSEG00000014753)	DOC2B (ENSCSEG00000014740)	tmem248 (ENSCSEG00000014724)
Turbot	MODERN SPECIES	16	ENSSMAG00000015937	ENSSMAG00000015824	ENSSMAG00000031157	ENSSMAG00000022744	ENSSMAG00000015767	ENSSMAG00000015748	ENSSMAG00000015736	ENSSMAG00000015721	ENSSMAG00000015686	ENSSMAG00000015644	slc35f2 (ENSSMAG00000015633)	ENSSMAG00000015509	ompb (ENSSMAG00000015574)	MYO7A (ENSSMAG00000015416)	ENSSMAG00000032239	ENSSMAG00000015371 ##22	ENSSMAG00000015302	ENSSMAG00000015221	ENSSMAG00000015191	ENSSMAG00000015180	ENSSMAG00000015173	ENSSMAG00000015049	mpzl1l (ENSSMAG00000015032)	ENSSMAG00000032956	emsy (ENSSMAG00000015001)	ENSSMAG00000035998	ENSSMAG00000014991	rcc1l (ENSSMAG00000014964)	castor2 (ENSSMAG00000031872)	ENSSMAG00000024921	ENSSMAG00000014938
Anabantaria	ANCESTRAL SPECIES	13	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Zig-zag eel	MODERN SPECIES	5	ENSMAMG00000001008	castor2 (ENSMAMG00000001064)	rcc1l (ENSMAMG00000001100)	ENSMAMG00000001187	ENSMAMG00000001216	emsy (ENSMAMG00000001261)	ENSMAMG00000026881	mpzl1l (ENSMAMG00000027186)	ENSMAMG00000001354	ENSMAMG00000001418	ENSMAMG00000001430	ENSMAMG00000001452	ENSMAMG00000001495	ENSMAMG00000001547	ENSMAMG00000001623	ENSMAMG00000001646 ##22	ENSMAMG00000001667	ENSMAMG00000001817	ompb (ENSMAMG00000001842)	ENSMAMG00000001854	slc35f2 (ENSMAMG00000001954)	elmod1 (ENSMAMG00000001980)	ENSMAMG00000002020	ENSMAMG00000025128	ENSMAMG00000025496	ENSMAMG00000002121	ENSMAMG00000002154	ENSMAMG00000002185	ENSMAMG00000002201	ENSMAMG00000002275	ENSMAMG00000002295
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Siamese fighting fish	MODERN SPECIES	5	sc5d (ENSBSLG00000011936)	TBCEL (ENSBSLG00000012032)	USP2 (ENSBSLG00000012236)	ENSBSLG00000012541	ENSBSLG00000013062	CRK (ENSBSLG00000013097)	ywhae2 (ENSBSLG00000013175)	ENSBSLG00000013482	elmod1 (ENSBSLG00000014921)	slc35f2 (ENSBSLG00000014935)	CUL5 (ENSBSLG00000014944)	CAPN5 (ENSBSLG00000015069)	ompb (ENSBSLG00000015121)	MYO7A (ENSBSLG00000015124)	ENSBSLG00000015677	AQP11 (ENSBSLG00000015706) ##22	ENSBSLG00000015712	FCHSD2 (ENSBSLG00000015745)	foxred1 (ENSBSLG00000015901)	kcnj1b (ENSBSLG00000015983)	ENSBSLG00000015986	rabep1 (ENSBSLG00000016006)	mpzl1l (ENSBSLG00000016417)	ENSBSLG00000016421	emsy (ENSBSLG00000016423)	ENSBSLG00000016441	tlcd5b (ENSBSLG00000016467)	rcc1l (ENSBSLG00000016472)	castor2 (ENSBSLG00000016483)	DOC2B (ENSBSLG00000016488)	ENSBSLG00000016500
Climbing perch	MODERN SPECIES	5	ENSATEG00000000785	ENSATEG00000000678	ENSATEG00000000617	ENSATEG00000000611	ENSATEG00000000597	ENSATEG00000000567	ENSATEG00000000528	ENSATEG00000000466	elmod1 (ENSATEG00000000421)	slc35f2 (ENSATEG00000000410)	ENSATEG00000000395	ompb (ENSATEG00000000380)	CAPN5 (ENSATEG00000000315)	MYO7A (ENSATEG00000000073)	GDPD4 (ENSATEG00000000053)	ENSATEG00000023313 ##22	ENSATEG00000023296	ENSATEG00000023272	ENSATEG00000023255	ENSATEG00000023244	ENSATEG00000023239	ENSATEG00000023217	mpzl1l (ENSATEG00000029159)	ENSATEG00000023203	emsy (ENSATEG00000023194)	ENSATEG00000026928	ENSATEG00000023177	rcc1l (ENSATEG00000023157)	castor2 (ENSATEG00000023144)	ENSATEG00000023135	tmem248 (ENSATEG00000023124)
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Oryzias	ANCESTRAL SPECIES	14	ENSGT00550000075101.q	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Oryzias_b	ANCESTRAL SPECIES	53	ENSGT00390000000141	ENSGT00950000183055.a.b	ENSGT00940000165106	ENSGT00940000164016	ENSGT00940000161062	ENSGT00530000063786.b	ENSGT00940000160785	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a
Indian medaka	MODERN SPECIES	4	plekhb1 (ENSOMEG00000002335)	TBCEL (ENSOMEG00000002324)	TECTA (ENSOMEG00000002309)	ENSOMEG00000002284	ENSOMEG00000002274	ENSOMEG00000002261	CRK (ENSOMEG00000002246)	ywhae2 (ENSOMEG00000002238)	gria4b (ENSOMEG00000002214)	MYO7A (ENSOMEG00000002179)	CAPN5 (ENSOMEG00000002138)	ompb (ENSOMEG00000002119)	CUL5 (ENSOMEG00000002107)	slc35f2 (ENSOMEG00000000029)	elmod1 (ENSOMEG00000000025)	AQP11 (ENSOMEG00000002076) ##22	ENSOMEG00000002068	FCHSD2 (ENSOMEG00000002057)	foxred1 (ENSOMEG00000002042)	kcnj1b (ENSOMEG00000002032)	ENSOMEG00000002025	rabep1 (ENSOMEG00000002008)	mpzl1l (ENSOMEG00000001988)	ENSOMEG00000001980	emsy (ENSOMEG00000001967)	ENSOMEG00000001943	ENSOMEG00000001873	ENSOMEG00000000012	st6gal1 (ENSOMEG00000001712)	ncf1 (ENSOMEG00000001705)	gria1b (ENSOMEG00000001682)
Javanese ricefish	MODERN SPECIES	5	klf8 (ENSOJAG00000017854)	rbm41 (ENSOJAG00000017881)	cldn2 (ENSOJAG00000017911)	CLIP2 (ENSOJAG00000017947)	GTF2IRD1 (ENSOJAG00000018222)	dtx2 (ENSOJAG00000018414)	tmem132e (ENSOJAG00000018444)	rad51d (ENSOJAG00000018456)	lig3 (ENSOJAG00000018520)	tmem248 (ENSOJAG00000019496)	ENSOJAG00000019539	ENSOJAG00000019559	ENSOJAG00000019594	ENSOJAG00000019602	ENSOJAG00000019613	AQP11 (ENSOJAG00000019634) ##22	FCHSD2 (ENSOJAG00000019670)	foxred1 (ENSOJAG00000019696)	kcnj1b (ENSOJAG00000019720)	ENSOJAG00000019733	rabep1 (ENSOJAG00000019803)	mpzl1l (ENSOJAG00000020322)	ENSOJAG00000020336	emsy (ENSOJAG00000020358)	ENSOJAG00000020578	tlcd5b (ENSOJAG00000020586)	rcc1l (ENSOJAG00000020598)	DOC2B (ENSOJAG00000020663)	CAPN5 (ENSOJAG00000020775)	ompb (ENSOJAG00000020893)	slc35f2 (ENSOJAG00000001681)
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT01030000234886.e.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114.e	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Japanese Medaka HdrR	MODERN SPECIES	5	ENSORLG00000014803	ENSORLG00000014818	ENSORLG00000014825	ENSORLG00000023366	ywhae2 (ENSORLG00000014845)	ENSORLG00000026199	gria4b (ENSORLG00000014865)	ENSORLG00000029515	elmod1 (ENSORLG00000014887)	slc35f2 (ENSORLG00000014902)	ENSORLG00000014938	ENSORLG00000014975	ompb (ENSORLG00000014978)	ENSORLG00000015036	ENSORLG00000021923	ENSORLG00000015053 ##22	ENSORLG00000028843	ENSORLG00000028737	foxred1 (ENSORLG00000015079)	kcnj1b (ENSORLG00000015086)	ENSORLG00000029829	rabep1 (ENSORLG00000015131)	mpzl1l (ENSORLG00000023228)	ENSORLG00000023939	emsy (ENSORLG00000023771)	ENSORLG00000022756	ENSORLG00000025239	rcc1l (ENSORLG00000015158)	castor2 (ENSORLG00000015182)	DOC2B (ENSORLG00000015189)	tmem248 (ENSORLG00000015203)
Chinese medaka	MODERN SPECIES	4612																ENSOSIG00000002571 ##22
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00940000175256	ENSGT00940000157670	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Poeciliinae	ANCESTRAL SPECIES	26	ENSGT00940000157670	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000166878	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317	ENSGT00390000006208.a
Poecilia	ANCESTRAL SPECIES	42	ENSGT00940000157670	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000166878	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317	ENSGT00390000006208.a
NAME_6	ANCESTRAL SPECIES	44	ENSGT00940000157670	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000166878	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317	ENSGT00390000006208.a
Sailfin molly	MODERN SPECIES	1380								tmem120aa (ENSPLAG00000014736)	styxl1 (ENSPLAG00000014729)	ENSPLAG00000014688	CAPN5 (ENSPLAG00000014677)	ompb (ENSPLAG00000014646)	MYO7A (ENSPLAG00000014621)	ENSPLAG00000014530	ENSPLAG00000014481	ENSPLAG00000014470 ##22	ENSPLAG00000014456	ENSPLAG00000014433	FCHSD2 (ENSPLAG00000014426)	foxred1 (ENSPLAG00000014418)
Amazon molly	MODERN SPECIES	393	HTR3B (ENSPFOG00000016571)	USP28 (ENSPFOG00000016610)	orai2 (ENSPFOG00000016719)	bckdk (ENSPFOG00000016728)	lrwd1 (ENSPFOG00000016751)	alkbh4 (ENSPFOG00000016780)	CBL (ENSPFOG00000016793)	ENSPFOG00000016824	tmem120aa (ENSPFOG00000016887)	styxl1 (ENSPFOG00000022292)	HEPACAM (ENSPFOG00000016926)	CAPN5 (ENSPFOG00000016938)	ompb (ENSPFOG00000020859)	MYO7A (ENSPFOG00000017038)	ENSPFOG00000017311	ENSPFOG00000017383 ##22	ENSPFOG00000020860	ENSPFOG00000023805
Guppy	MODERN SPECIES	444	HTR3B (ENSPREG00000015317)	USP28 (ENSPREG00000015298)	orai2 (ENSPREG00000015290)	bckdk (ENSPREG00000015279)	lrwd1 (ENSPREG00000015261)	alkbh4 (ENSPREG00000015249)	CBL (ENSPREG00000015193)	ENSPREG00000015099	tmem120aa (ENSPREG00000015067)	styxl1 (ENSPREG00000015018)	HEPACAM (ENSPREG00000014972)	ompb (ENSPREG00000014958)	CAPN5 (ENSPREG00000014934)	MYO7A (ENSPREG00000014771)	GDPD4 (ENSPREG00000014734)	ENSPREG00000014730 ##22	ENSPREG00000014700	FCHSD2 (ENSPREG00000014659)	foxred1 (ENSPREG00000014645)	kcnj1b (ENSPREG00000014638)	ENSPREG00000014624	rabep1 (ENSPREG00000014547)	mpzl1l (ENSPREG00000014512)	ENSPREG00000014506	emsy (ENSPREG00000014428)	ENSPREG00000014395	tlcd5b (ENSPREG00000014386)	ENSPREG00000014384	rcc1l (ENSPREG00000014358)	castor2 (ENSPREG00000014328)	DOC2B (ENSPREG00000014289)
Platyfish	MODERN SPECIES	2	ENSXMAG00000023400	ywhae2 (ENSXMAG00000000541)	gria4b (ENSXMAG00000008529)	elmod1 (ENSXMAG00000012302)	slc35f2 (ENSXMAG00000015958)	CUL5 (ENSXMAG00000012228)	cbln10 (ENSXMAG00000012226)	ENSXMAG00000025188	tmem120aa (ENSXMAG00000011139)	styxl1 (ENSXMAG00000011154)	HEPACAM (ENSXMAG00000027038)	ompb (ENSXMAG00000019651)	CAPN5 (ENSXMAG00000011169)	MYO7A (ENSXMAG00000011193)	GDPD4 (ENSXMAG00000011255)	AQP11 (ENSXMAG00000000651) ##22	ENSXMAG00000027612	ENSXMAG00000028499	FCHSD2 (ENSXMAG00000011270)	foxred1 (ENSXMAG00000011302)	kcnj1b (ENSXMAG00000011316)	ENSXMAG00000011318	rabep1 (ENSXMAG00000011320)	mpzl1l (ENSXMAG00000011358)	ENSXMAG00000028354	emsy (ENSXMAG00000011362)	ENSXMAG00000011381	ENSXMAG00000021745	tlcd5b (ENSXMAG00000023906)	ENSXMAG00000025697	rcc1l (ENSXMAG00000011400)
NAME_4	ANCESTRAL SPECIES	117				ENSGT00390000006344	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Mummichog	MODERN SPECIES	755											CAPN5 (ENSFHEG00000017686)	ompb (ENSFHEG00000017653)	MYO7A (ENSFHEG00000017637)	ENSFHEG00000017569	ENSFHEG00000017555	ENSFHEG00000017505 ##22
Sheepshead minnow	MODERN SPECIES	517														MYO7A (ENSCVAG00000011913)	ENSCVAG00000012002	ENSCVAG00000012044 ##22	ENSCVAG00000012733	FCHSD2 (ENSCVAG00000012852)	foxred1 (ENSCVAG00000012954)	kcnj1b (ENSCVAG00000012991)	ENSCVAG00000013026	rabep1 (ENSCVAG00000013087)	mpzl1l (ENSCVAG00000013110)	ENSCVAG00000013118	emsy (ENSCVAG00000013350)	tlcd5b (ENSCVAG00000013414)
Aplocheiloidei	ANCESTRAL SPECIES	59	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Mangrove rivulus	MODERN SPECIES	318			ENSKMAG00000009112	ENSKMAG00000009090	CRK (ENSKMAG00000009068)	ywhae2 (ENSKMAG00000009042)	gria4b (ENSKMAG00000008971)	elmod1 (ENSKMAG00000008891)	slc35f2 (ENSKMAG00000008856)	CUL5 (ENSKMAG00000008785)	ompb (ENSKMAG00000008765)	CAPN5 (ENSKMAG00000008716)	MYO7A (ENSKMAG00000008633)	ENSKMAG00000008541	GDPD4 (ENSKMAG00000008513)	ENSKMAG00000008498 ##22	ENSKMAG00000008467
Turquoise killifish	MODERN SPECIES	1620	ENSNFUG00015005537	zgc:162171 (ENSNFUG00015005531)	MED31 (ENSNFUG00015005523)	ENSNFUG00015005515	ENSNFUG00015005509	RNASEK-C17ORF49 (ENSNFUG00015005502)	RNASEKB (ENSNFUG00015005499)	nup98 (ENSNFUG00015005465)	ENSNFUG00015005462	ENSNFUG00015005460	NHP2 (ENSNFUG00015005456)	ENSNFUG00015005450	ENSNFUG00015005443	ENSNFUG00015005429	ENSNFUG00015005424	ENSNFUG00015005420 ##22	ENSNFUG00015005411	ENSNFUG00015005384	FCHSD2 (ENSNFUG00015005345)	FOXRED1 (ENSNFUG00015005086)	kcnj1b (ENSNFUG00015005034)	ENSNFUG00015005030	RABEP1 (ENSNFUG00015004848)	ENSNFUG00015022801	MPZL1L (ENSNFUG00015022796)	LRRC32 (ENSNFUG00015022791)	ENSNFUG00015022790	C10H11ORF30 (ENSNFUG00015022778)	ARHGEF12B (ENSNFUG00015022760)	TMEM136 (ENSNFUG00015022755)	rcc1l (ENSNFUG00015022719)
Ovalentaria_B	ANCESTRAL SPECIES	16	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Cichlidae	ANCESTRAL SPECIES	4	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	14	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	22	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Haplochromini	ANCESTRAL SPECIES	8	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Burton s mouthbrooder	MODERN SPECIES	282	TBCEL (ENSHBUG00000012511)	TECTA (ENSHBUG00000012560)	ENSHBUG00000012616	ENSHBUG00000012627	ENSHBUG00000012649	ENSHBUG00000012670	ywhae2 (ENSHBUG00000012708)	gria4b (ENSHBUG00000012754)	elmod1 (ENSHBUG00000012814)	slc35f2 (ENSHBUG00000012868)	CUL5 (ENSHBUG00000012991)	ompb (ENSHBUG00000013019)	CAPN5 (ENSHBUG00000013069)	MYO7A (ENSHBUG00000013188)	GDPD4 (ENSHBUG00000013213)	ENSHBUG00000013243 ##22	ENSHBUG00000013341	FCHSD2 (ENSHBUG00000013486)	foxred1 (ENSHBUG00000013505)	kcnj1b (ENSHBUG00000013510)	ENSHBUG00000013532	rabep1 (ENSHBUG00000013663)	mpzl1l (ENSHBUG00000013690)	ENSHBUG00000013703	emsy (ENSHBUG00000013803)	ENSHBUG00000013827	tlcd5b (ENSHBUG00000013844)	rcc1l (ENSHBUG00000013891)	castor2 (ENSHBUG00000013944)	DOC2B (ENSHBUG00000013991)	tmem248 (ENSHBUG00000014025)
Haplochromini_A	ANCESTRAL SPECIES	6	ENSGT00390000013989.b.g.a	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
P. nyererei	MODERN SPECIES	310	TECTA (ENSPNYG00000010819)	ENSPNYG00000010915	ENSPNYG00000010944	ENSPNYG00000010953	CRK (ENSPNYG00000010973)	ywhae2 (ENSPNYG00000010998)	gria4b (ENSPNYG00000011041)	elmod1 (ENSPNYG00000011122)	slc35f2 (ENSPNYG00000011151)	CUL5 (ENSPNYG00000011193)	CAPN5 (ENSPNYG00000011323)	ompb (ENSPNYG00000011353)	MYO7A (ENSPNYG00000011380)	ENSPNYG00000011471	ENSPNYG00000011495	ENSPNYG00000011524 ##22	ENSPNYG00000011536	FCHSD2 (ENSPNYG00000011552)	ENSPNYG00000011581	foxred1 (ENSPNYG00000011608)	kcnj1b (ENSPNYG00000011686)	ENSPNYG00000011703	rabep1 (ENSPNYG00000011756)	ENSPNYG00000011844	mpzl1l (ENSPNYG00000011860)	ENSPNYG00000011873	emsy (ENSPNYG00000011893)	ENSPNYG00000011983	tlcd5b (ENSPNYG00000012027)	rcc1l (ENSPNYG00000012045)	castor2 (ENSPNYG00000012091)
Haplochromini_B	ANCESTRAL SPECIES	16	ENSGT00390000013989.b.g.a	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Zebra mbuna	MODERN SPECIES	1092	TBCEL (ENSMZEG00005010743)	TECTA (ENSMZEG00005010758)	ENSMZEG00005010774	ENSMZEG00005010803	ENSMZEG00005010810	CRK (ENSMZEG00005010819)	ywhae2 (ENSMZEG00005010829)	gria4b (ENSMZEG00005010846)	elmod1 (ENSMZEG00005010879)	slc35f2 (ENSMZEG00005010904)	CUL5 (ENSMZEG00005010930)	CAPN5 (ENSMZEG00005010960)	ompb (ENSMZEG00005010970)	MYO7A (ENSMZEG00005011034)	ENSMZEG00005011111	ENSMZEG00005011123 ##22	ENSMZEG00005011134	FCHSD2 (ENSMZEG00005011163)	foxred1 (ENSMZEG00005011217)	kcnj1b (ENSMZEG00005011231)	ENSMZEG00005011235	rabep1 (ENSMZEG00005011268)	mpzl1l (ENSMZEG00005011307)	ENSMZEG00005011320	emsy (ENSMZEG00005011328)	ENSMZEG00005011352	tlcd5b (ENSMZEG00005011365)	rcc1l (ENSMZEG00005011370)	castor2 (ENSMZEG00005011388)	DOC2B (ENSMZEG00005011406)	tmem248 (ENSMZEG00005011420)
Eastern happy	MODERN SPECIES	1	ENSACLG00000022467	ENSACLG00000022557	ENSACLG00000022564	CRK (ENSACLG00000022569)	ywhae2 (ENSACLG00000022608)	gria4b (ENSACLG00000022681)	ENSACLG00000022741	elmod1 (ENSACLG00000022760)	slc35f2 (ENSACLG00000022846)	CUL5 (ENSACLG00000022875)	CAPN5 (ENSACLG00000022960)	ompb (ENSACLG00000023024)	ENSACLG00000023038	MYO7A (ENSACLG00000023046)	ENSACLG00000023124	ENSACLG00000023144 ##22	ENSACLG00000023168	FCHSD2 (ENSACLG00000023201)	foxred1 (ENSACLG00000023282)	kcnj1b (ENSACLG00000023295)	ENSACLG00000023304	rabep1 (ENSACLG00000023321)	mpzl1l (ENSACLG00000023426)	ENSACLG00000023438	emsy (ENSACLG00000023444)	ENSACLG00000023550	tlcd5b (ENSACLG00000023621)	rcc1l (ENSACLG00000023656)	castor2 (ENSACLG00000023707)	DOC2B (ENSACLG00000023750)	ENSACLG00000023794
Lyretail cichlid	MODERN SPECIES	297	TBCEL (ENSNBRG00000012856)	TECTA (ENSNBRG00000012877)	ENSNBRG00000012931	ENSNBRG00000012965	ENSNBRG00000012996	CRK (ENSNBRG00000013010)	ywhae2 (ENSNBRG00000013043)	gria4b (ENSNBRG00000013070)	elmod1 (ENSNBRG00000013140)	slc35f2 (ENSNBRG00000013171)	CUL5 (ENSNBRG00000013257)	CAPN5 (ENSNBRG00000013353)	ompb (ENSNBRG00000013376)	MYO7A (ENSNBRG00000013391)	ENSNBRG00000013486	ENSNBRG00000013531 ##22	ENSNBRG00000013541	FCHSD2 (ENSNBRG00000013569)	ENSNBRG00000013607	foxred1 (ENSNBRG00000013634)	kcnj1b (ENSNBRG00000013734)	rabep1 (ENSNBRG00000013749)	mpzl1l (ENSNBRG00000013802)	ENSNBRG00000013811	emsy (ENSNBRG00000013848)	ENSNBRG00000013965	tlcd5b (ENSNBRG00000014071)	rcc1l (ENSNBRG00000014086)	castor2 (ENSNBRG00000014104)	DOC2B (ENSNBRG00000014131)	tmem248 (ENSNBRG00000014163)
Nile tilapia	MODERN SPECIES	1	TECTA (ENSONIG00000009508)	ENSONIG00000009511	ENSONIG00000009512	ENSONIG00000009514	CRK (ENSONIG00000009518)	ywhae2 (ENSONIG00000032945)	gria4b (ENSONIG00000009523)	elmod1 (ENSONIG00000009536)	slc35f2 (ENSONIG00000009539)	CUL5 (ENSONIG00000009545)	CAPN5 (ENSONIG00000009550)	ompb (ENSONIG00000021460)	ENSONIG00000027896	MYO7A (ENSONIG00000009556)	ENSONIG00000009570	AQP11 (ENSONIG00000009574) ##22	ENSONIG00000009575	ENSONIG00000032351	ENSONIG00000038404	FCHSD2 (ENSONIG00000013349)	foxred1 (ENSONIG00000013346)	kcnj1b (ENSONIG00000013345)	ENSONIG00000013344	rabep1 (ENSONIG00000013337)	mpzl1l (ENSONIG00000013334)	ENSONIG00000013333	emsy (ENSONIG00000013319)	ENSONIG00000013306	tlcd5b (ENSONIG00000013304)	rcc1l (ENSONIG00000013300)	castor2 (ENSONIG00000013294)
Midas cichlid	MODERN SPECIES	344	TECTA (ENSACIG00000012735)	ENSACIG00000012788	ENSACIG00000012816	ENSACIG00000012844	ENSACIG00000012851	CRK (ENSACIG00000012862)	ywhae2 (ENSACIG00000012875)	gria4b (ENSACIG00000012893)	elmod1 (ENSACIG00000012935)	slc35f2 (ENSACIG00000012974)	CUL5 (ENSACIG00000013036)	CAPN5 (ENSACIG00000013078)	ompb (ENSACIG00000013111)	MYO7A (ENSACIG00000013121)	ENSACIG00000013215	AQP11 (ENSACIG00000013247) ##22	ENSACIG00000013262	FCHSD2 (ENSACIG00000013308)	ENSACIG00000013347	foxred1 (ENSACIG00000013363)	kcnj1b (ENSACIG00000013421)	ENSACIG00000013430	rabep1 (ENSACIG00000013444)	mpzl1l (ENSACIG00000013477)	ENSACIG00000013488	emsy (ENSACIG00000013498)	ENSACIG00000013556	tlcd5b (ENSACIG00000013657)	rcc1l (ENSACIG00000013668)	castor2 (ENSACIG00000013695)	DOC2B (ENSACIG00000013720)
Pomacentridae	ANCESTRAL SPECIES	57	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e
Pomacentridae_A	ANCESTRAL SPECIES	65	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e
Amphiprion	ANCESTRAL SPECIES	71	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00530000064449.A.b.b.t.a.a	ENSGT00390000008162.e	ENSGT00940000159782.b.g	ENSGT00940000155677.b	ENSGT00820000127055.a.b
Clown anemonefish	MODERN SPECIES	3551															ENSAOCG00000006384	AQP11 (ENSAOCG00000006358) ##22	ENSAOCG00000006338	ENSAOCG00000006313	FCHSD2 (ENSAOCG00000006252)	foxred1 (ENSAOCG00000006235)	kcnj1b (ENSAOCG00000006214)	ENSAOCG00000006184	rabep1 (ENSAOCG00000006147)	mpzl1l (ENSAOCG00000006040)	ENSAOCG00000006032	emsy (ENSAOCG00000006020)
Orange clownfish	MODERN SPECIES	6	dtx2 (ENSAPEG00000010133)	tmem132e (ENSAPEG00000010174)	rad51d (ENSAPEG00000010305)	lig3 (ENSAPEG00000010317)	tmem248 (ENSAPEG00000010347)	DOC2B (ENSAPEG00000010376)	castor2 (ENSAPEG00000010421)	rcc1l (ENSAPEG00000010470)	slc35f2 (ENSAPEG00000010522)	CUL5 (ENSAPEG00000010633)	setb (ENSAPEG00000010707)	CAPN5 (ENSAPEG00000010775)	ompb (ENSAPEG00000010827)	MYO7A (ENSAPEG00000010851)	ENSAPEG00000011042	AQP11 (ENSAPEG00000011055) ##22	ENSAPEG00000011071	ENSAPEG00000011098	FCHSD2 (ENSAPEG00000011205)	foxred1 (ENSAPEG00000011215)	kcnj1b (ENSAPEG00000011228)	ENSAPEG00000011285	rabep1 (ENSAPEG00000011338)	mpzl1l (ENSAPEG00000011425)	ENSAPEG00000011454	emsy (ENSAPEG00000011470)	ENSAPEG00000011590	ENSAPEG00000011613	tlcd5b (ENSAPEG00000011625)	elmod1 (ENSAPEG00000011637)	gria4b (ENSAPEG00000011689)
Spiny chromis	MODERN SPECIES	2097															ENSAPOG00000001292	ENSAPOG00000001283 ##22	pgap4 (ENSAPOG00000001279)
Bicolor damselfish	MODERN SPECIES	509												ompb (ENSSPAG00000005744)	CAPN5 (ENSSPAG00000005714)	MYO7A (ENSSPAG00000005595)	GDPD4 (ENSSPAG00000005565)	AQP11 (ENSSPAG00000005549) ##22	ENSSPAG00000005531	FCHSD2 (ENSSPAG00000005482)	foxred1 (ENSSPAG00000005430)	kcnj1b (ENSSPAG00000005420)	ENSSPAG00000005408	rabep1 (ENSSPAG00000005310)	mpzl1l (ENSSPAG00000005279)	ENSSPAG00000005269	emsy (ENSSPAG00000005235)
Tiger tail seahorse	MODERN SPECIES	174	TBCEL (ENSHCOG00000010031)	TECTA (ENSHCOG00000010017)	USP2 (ENSHCOG00000000312)	ENSHCOG00000009950	ENSHCOG00000009939	CRK (ENSHCOG00000009925)	ywhae2 (ENSHCOG00000009904)	gria4b (ENSHCOG00000009872)	elmod1 (ENSHCOG00000009827)	slc35f2 (ENSHCOG00000009797)	cul5a (ENSHCOG00000009785)	CAPN5 (ENSHCOG00000009737)	ompb (ENSHCOG00000009715)	MYO7A (ENSHCOG00000009703)	ENSHCOG00000009612	AQP11 (ENSHCOG00000009586) ##22	ENSHCOG00000009570	FCHSD2 (ENSHCOG00000009540)	ENSHCOG00000009502	ENSHCOG00000009469	alox5ap (ENSHCOG00000009254)	ENSHCOG00000009242	ENSHCOG00000009221	ENSHCOG00000009193	zar1l (ENSHCOG00000009172)	PDS5B (ENSHCOG00000009149)	KL (ENSHCOG00000009112)	rfc3 (ENSHCOG00000009093)	ENSHCOG00000009063	ENSHCOG00000009044	SERTM1 (ENSHCOG00000009019)
Pinecone sodierfish	MODERN SPECIES	5	plekhb1 (ENSMMDG00005015912)	sc5d (ENSMMDG00005015902)	cadm1a (ENSMMDG00005015899)	ncam1a (ENSMMDG00005014838)	zbtb16a (ENSMMDG00005014811)	HTR3A (ENSMMDG00005014807)	HTR3B (ENSMMDG00005014804)	USP28 (ENSMMDG00005010690)	orai2 (ENSMMDG00005010635)	bckdk (ENSMMDG00005010570)	lrwd1 (ENSMMDG00005010558)	ENSMMDG00005010553	ENSMMDG00005010546	alkbh4 (ENSMMDG00005010541)	CBL (ENSMMDG00005010540)	ENSMMDG00005010536 ##22	ENSMMDG00005010534	FCHSD2 (ENSMMDG00005010529)	ENSMMDG00005010526	foxred1 (ENSMMDG00005010328)	kcnj1b (ENSMMDG00005010321)	ENSMMDG00005010320	rabep1 (ENSMMDG00005008501)	mpzl1l (ENSMMDG00005008442)	ENSMMDG00005008440	emsy (ENSMMDG00005008415)	ENSMMDG00005008401	ENSMMDG00005008393	ENSMMDG00005008388	tlcd5b (ENSMMDG00005008386)	rcc1l (ENSMMDG00005008269)
Cod	MODERN SPECIES	20	ENSGMOG00000017287	tmem248 (ENSGMOG00000003359)	ENSGMOG00000003307	ENSGMOG00000003267	tmem132e (ENSGMOG00000030984)	ENSGMOG00000013676	ENSGMOG00000013638	ENSGMOG00000013615	ENSGMOG00000031546	smfn (ENSGMOG00000006370)	ENSGMOG00000036095	ENSGMOG00000006457	ENSGMOG00000006673	ENSGMOG00000006998	ENSGMOG00000022261	ENSGMOG00000023961 ##22	ENSGMOG00000028510	ENSGMOG00000006084	ENSGMOG00000024602	ENSGMOG00000006075	ENSGMOG00000006069	ENSGMOG00000031628	ncam1a (ENSGMOG00000019522)	zbtb16a (ENSGMOG00000012795)	HTR3A (ENSGMOG00000024159)	HTR3A (ENSGMOG00000012790)	ENSGMOG00000012786	USP28 (ENSGMOG00000012774)	ENSGMOG00000013151	ENSGMOG00000013164	ENSGMOG00000011048
Protacanthopterygii	ANCESTRAL SPECIES	180	ENSGT00390000006114	ENSGT00530000063405.b.f	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.c.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22
Salmoninae	ANCESTRAL SPECIES	35	ENSGT00950000183155.a.a.a.b.c	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00390000009497.a.c	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a ##22	ENSGT00390000010063.pb	ENSGT00530000064411.b.e	ENSGT00390000008610.a.b.b.a.a.b	ENSGT00510000046732.A.c.q	ENSGT00390000005140.a.o.a	ENSGT00390000013989.b.f	ENSGT01100000263504.a.a.ob.a	ENSGT00940000164977.a.a	ENSGT00390000002548	ENSGT00940000155573.g.b.b	ENSGT00940000155478.hb.b.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b.e	ENSGT00950000182985.a.b.a.b
Huchen	MODERN SPECIES	2733											ENSHHUG00000052009	CAPN5 (ENSHHUG00000052003)	MYO7A (ENSHHUG00000051812)	GDPD4 (ENSHHUG00000051796)	ENSHHUG00000051794	ENSHHUG00000051792 ##22
Salmoninae_a	ANCESTRAL SPECIES	44	ENSGT00950000183155.a.a.a.b.c	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00390000009497.a.c	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a ##22	ENSGT00390000010063.pb	ENSGT00530000064411.b.e	ENSGT00390000008610.a.b.b.a.a.b	ENSGT00510000046732.A.c.q	ENSGT00390000005140.a.o.a	ENSGT00390000013989.b.f	ENSGT00940000164977.a.a	ENSGT00390000002548.j	ENSGT00940000155573.g.b.b	ENSGT00940000155478.hb.b.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b.e	ENSGT00950000182985.a.b.a.b	ENSGT01030000234613.b.b.h.a
Oncorhynchus	ANCESTRAL SPECIES	41	ENSGT00530000063405.b.f.e	ENSGT00950000183155.a.a.a.b.c	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a ##22	ENSGT00390000010063.pb.a	ENSGT00530000064411.b.e	ENSGT00390000008610.a.b.b.a.a.b	ENSGT00510000046732.A.c.q	ENSGT00390000005140.a.o.a	ENSGT00390000013989.b.f	ENSGT00940000164977.a.a	ENSGT00390000002548.j	ENSGT00940000155573.g.b.b	ENSGT00940000155478.hb.b.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b.e	ENSGT00950000182985.a.b.a.b	ENSGT01030000234613.b.b.h.a
Oncorhynchus_a	ANCESTRAL SPECIES	43	ENSGT00950000183155.a.a.a.b.c	ENSGT00940000155545.b.f	ENSGT00940000161289.n.a.b	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a ##22	ENSGT00390000010063.pb.a	ENSGT00530000064411.b.e	ENSGT00390000008610.a.b.b.a.a.b	ENSGT00510000046732.A.c.q	ENSGT00390000005140.a.o.a	ENSGT00390000013989.b.f	ENSGT00940000164977.a.a	ENSGT00390000002548.j	ENSGT00940000155573.g.b.b	ENSGT00940000155478.hb.b.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b.e	ENSGT00950000182985.a.b.a.b	ENSGT01030000234613.b.b.h.a
Coho salmon	MODERN SPECIES	20	TECTA (ENSOKIG00005023526)	ENSOKIG00005023383	ENSOKIG00005023343	POLDIP2 (ENSOKIG00005023285)	LRRC75A (ENSOKIG00005023242)	CRK (ENSOKIG00005023227)	ENSOKIG00005023163	ENSOKIG00005023153	gria4b (ENSOKIG00005021164)	elmod1 (ENSOKIG00005020974)	CUL5 (ENSOKIG00005020220)	CAPN5 (ENSOKIG00005048805)	MYO7A (ENSOKIG00005047699)	GDPD4 (ENSOKIG00005047456)	ENSOKIG00005047437	ENSOKIG00005047419 ##22	ENSOKIG00005047410	ENSOKIG00005047358	FCHSD2 (ENSOKIG00005047308)	ENSOKIG00005047283	plekhb1 (ENSOKIG00005047266)	ENSOKIG00005047257	crx (ENSOKIG00005047252)	nova1 (ENSOKIG00005047065)	ENSOKIG00005047032	zgc:153990 (ENSOKIG00005047028)	ENSOKIG00005047019	ENSOKIG00005047015	dlb (ENSOKIG00005047008)	ppp1r14aa (ENSOKIG00005046985)	ENSOKIG00005046979
Chinook salmon	MODERN SPECIES	23	TBCEL (ENSOTSG00005036631)	TECTA (ENSOTSG00005036633)	USP2 (ENSOTSG00005036637)	ENSOTSG00005036639	ENSOTSG00005036641	LRRC75A (ENSOTSG00005036645)	ENSOTSG00005036649	ywhae2 (ENSOTSG00005036653)	gria4b (ENSOTSG00005036677)	elmod1 (ENSOTSG00005038210)	CUL5 (ENSOTSG00005038212)	CAPN5 (ENSOTSG00005038217)	ENSOTSG00005038291	MYO7A (ENSOTSG00005038307)	GDPD4 (ENSOTSG00005038471)	ENSOTSG00005038473 ##22	ENSOTSG00005038474	ENSOTSG00005038476	ENSOTSG00005038482	FCHSD2 (ENSOTSG00005038485)	fam168a (ENSOTSG00005038579)	plekhb1 (ENSOTSG00005038581)	ENSOTSG00005038582	kptn (ENSOTSG00005038591)	crx (ENSOTSG00005038635)	nova1 (ENSOTSG00005038637)	ENSOTSG00005038639	zgc:153990 (ENSOTSG00005038641)	ENSOTSG00005038643	dlb (ENSOTSG00005038647)	ppp1r14aa (ENSOTSG00005038653)
Rainbow trout	MODERN SPECIES	1	ENSOMYG00000034836	ENSOMYG00000034858	ENSOMYG00000034867	ENSOMYG00000034898	ENSOMYG00000034951	ENSOMYG00000001569	ENSOMYG00000001718	gria4b (ENSOMYG00000002271)	ENSOMYG00000002427	elmod1 (ENSOMYG00000072212)	ENSOMYG00000002671	CAPN5 (ENSOMYG00000002761)	MYO7A (ENSOMYG00000004362)	GDPD4 (ENSOMYG00000005865)	ENSOMYG00000060615	ENSOMYG00000005887 ##22	ENSOMYG00000005939	ENSOMYG00000005978	ENSOMYG00000006097	ENSOMYG00000060501	ENSOMYG00000006287	ENSOMYG00000006448	ENSOMYG00000006490	ENSOMYG00000006507	ENSOMYG00000006535	nova1 (ENSOMYG00000006831)	ENSOMYG00000006889	zgc:153990 (ENSOMYG00000006899)	ENSOMYG00000006924	dlb (ENSOMYG00000006961)	CKM (ENSOMYG00000007272)
Salmo	ANCESTRAL SPECIES	17	ENSGT00530000063405.b.f.e	ENSGT00950000183155.a.a.a.b.c	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00390000009497.a.c	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a ##22	ENSGT00390000010063.pb	ENSGT00530000064411.b.e	ENSGT00390000008610.a.b.b.a.a.b	ENSGT00510000046732.A.c.q	ENSGT00390000005140.a.o.a	ENSGT00390000013989.b.f	ENSGT01100000263504.a.b.b.a.b.tb	ENSGT00940000164977.a.a	ENSGT00390000002548.j	ENSGT00940000155573.g.b.b	ENSGT00990000213120	ENSGT00940000155478.hb.b.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b.e
River trout	MODERN SPECIES	10	TBCEL (ENSSTUG00000041639)	TECTA (ENSSTUG00000041688)	ENSSTUG00000042512	ENSSTUG00000042599	ENSSTUG00000042615	POLDIP2 (ENSSTUG00000042758)	ENSSTUG00000042909	ywhae2 (ENSSTUG00000042940)	gria4b (ENSSTUG00000043268)	elmod1 (ENSSTUG00000044172)	CUL5 (ENSSTUG00000044214)	CAPN5 (ENSSTUG00000044359)	ompb (ENSSTUG00000044427)	MYO7A (ENSSTUG00000044508)	ENSSTUG00000046332	ENSSTUG00000046345 ##22	ENSSTUG00000046355	ENSSTUG00000046383	ENSSTUG00000046392	FCHSD2 (ENSSTUG00000046420)	fam168a (ENSSTUG00000046495)	plekhb1 (ENSSTUG00000046511)	ENSSTUG00000046520	crx (ENSSTUG00000046524)	kptn (ENSSTUG00000046541)	nova1 (ENSSTUG00000046672)	ENSSTUG00000046696	CAPNS1 (ENSSTUG00000046718)	zgc:153990 (ENSSTUG00000046722)	ENSSTUG00000046727	ENSSTUG00000046731
Atlantic salmon	MODERN SPECIES	23	ENSSSAG00000120351	ENSSSAG00000116408	ENSSSAG00000080079	ENSSSAG00000105016	ENSSSAG00000095358	gria4b (ENSSSAG00000104085)	ENSSSAG00000108261	ENSSSAG00000001489	ENSSSAG00000116155	ompb (ENSSSAG00000001217)	CAPN5 (ENSSSAG00000119704)	MYO7A (ENSSSAG00000000855)	ENSSSAG00000117321	GDPD4 (ENSSSAG00000000716)	ENSSSAG00000000693	ENSSSAG00000099308 ##22	ENSSSAG00000118846	ENSSSAG00000000673	ENSSSAG00000000620	ENSSSAG00000107897	fam168a (ENSSSAG00000000571)	h3f3a (ENSSSAG00000076232)	ENSSSAG00000101243	ENSSSAG00000076024	ENSSSAG00000075999	nova1 (ENSSSAG00000076005)	ENSSSAG00000075994	zgc:153990 (ENSSSAG00000108819)	ENSSSAG00000075989	dlb (ENSSSAG00000063795)	ppp1r14aa (ENSSSAG00000086720)
Northern pike	MODERN SPECIES	6	TECTA (ENSELUG00000018390)	ENSELUG00000018327	ENSELUG00000018288	ENSELUG00000018240	POLDIP2 (ENSELUG00000018214)	CRK (ENSELUG00000018178)	ENSELUG00000018168	gria4b (ENSELUG00000018146)	elmod1 (ENSELUG00000018104)	slc35f2 (ENSELUG00000018044)	CUL5 (ENSELUG00000018014)	ompb (ENSELUG00000017884)	CAPN5 (ENSELUG00000017917)	MYO7A (ENSELUG00000017865)	GDPD4 (ENSELUG00000017779)	ENSELUG00000017744 ##22	ENSELUG00000017721	ENSELUG00000033123	ENSELUG00000001307	ENSELUG00000017575	FCHSD2 (ENSELUG00000017539)	fam168a (ENSELUG00000000682)	ENSELUG00000025385	ENSELUG00000017446	crx (ENSELUG00000017439)	kptn (ENSELUG00000017416)	nova1 (ENSELUG00000017375)	alkbh6 (ENSELUG00000017352)	capns1a (ENSELUG00000017326)	zgc:153990 (ENSELUG00000017267)	ENSELUG00000017247
Otomorpha	ANCESTRAL SPECIES																	ENSGT00530000063816.c.a ##22
Otophysi	ANCESTRAL SPECIES																	ENSGT00530000063816.c.a ##22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00530000063816.c.a ##22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00530000063816.c.a ##22
Characoidei	ANCESTRAL SPECIES	78	ENSGT00950000182815.a.a.a.a.a.c.b	ENSGT00940000155919.b.b	ENSGT00940000155292.db.b	ENSGT01100000263502.B.a.b.a	ENSGT01100000263502.B.a.b.b	ENSGT00950000182993.A.b.f	ENSGT00940000158504	ENSGT00950000182993.A.b.e	ENSGT00390000015433	ENSGT00800000124150	ENSGT00730000112225	ENSGT00390000016532	ENSGT00390000010427.c	ENSGT00940000155464.a.a	ENSGT00940000161387	ENSGT00530000063816.c.a ##22	ENSGT00530000064411.b	ENSGT00940000165592.b	ENSGT00940000159524	ENSGT00940000158090	ENSGT00390000012955	ENSGT00940000154769	ENSGT00390000013989.b	ENSGT00390000005140.a	ENSGT00510000046732.A.c	ENSGT00940000155599.i.b	ENSGT00940000155599.i.a.b	ENSGT00940000155713	ENSGT00940000156995.b
Red-bellied piranha	MODERN SPECIES	132	im:7159173 (ENSPNAG00000006840)	ENSPNAG00000006751	ENSPNAG00000029184	dscama (ENSPNAG00000029162)	mmp30 (ENSPNAG00000028946)	ENSPNAG00000028880	MMP1 (ENSPNAG00000028859)	ENSPNAG00000005687	ENSPNAG00000004356	MMP1 (ENSPNAG00000028112)	MMP1 (ENSPNAG00000028037)	ENSPNAG00000027971	acer3 (ENSPNAG00000027832)	TSKU (ENSPNAG00000027809)	ENSPNAG00000006784	ENSPNAG00000027775 ##22	ENSPNAG00000027765	ENSPNAG00000005477	ucp3 (ENSPNAG00000027652)	ucp2 (ENSPNAG00000006067)	dnajb13 (ENSPNAG00000004242)	mrpl48 (ENSPNAG00000027512)	ENSPNAG00000005519	plekhb1 (ENSPNAG00000005163)	fam168a (ENSPNAG00000004213)	FCHSD2 (ENSPNAG00000027281)	dhrs13a.2 (ENSPNAG00000027267)	dhrs13a.1 (ENSPNAG00000004202)	ENSPNAG00000027235
Mexicana tetra	MODERN SPECIES	12	glis3 (ENSAMXG00000019181)	UNC5C (ENSAMXG00000007025)	bmpr1bb (ENSAMXG00000006998)	pdlim5b (ENSAMXG00000034634)	opn4xa (ENSAMXG00000006974)	EGFLAM (ENSAMXG00000006956)	gdnfa (ENSAMXG00000042733)	WDR70 (ENSAMXG00000006938)	ENSAMXG00000031985	ENSAMXG00000041226	nup155 (ENSAMXG00000006908)	nipblb (ENSAMXG00000006890)	slc1a3b (ENSAMXG00000000008)	ENSAMXG00000039562	ENSAMXG00000038184	ENSAMXG00000034583 ##22	ENSAMXG00000033076	RSF1 (ENSAMXG00000036069)	ENSAMXG00000041245	ucp3 (ENSAMXG00000035625)	ucp2 (ENSAMXG00000006822)	dnajb13 (ENSAMXG00000006806)	mrpl48 (ENSAMXG00000006784)	rab6a (ENSAMXG00000032547)	plekhb1 (ENSAMXG00000006760)	fam168a (ENSAMXG00000006758)	FCHSD2 (ENSAMXG00000006752)	dhrs13a.2 (ENSAMXG00000006741)	dhrs13a.1 (ENSAMXG00000038194)	PHF12 (ENSAMXG00000006728)	SEZ6 (ENSAMXG00000006718)
Neopterygii	ANCESTRAL SPECIES	50	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00940000159782	ENSGT00390000015655.a	ENSGT00940000165121	ENSGT00940000158132	ENSGT00390000018904	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497	ENSGT00940000156536.e.a	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.a	ENSGT00390000013989.b
Spotted gar	MODERN SPECIES	669	ENSLOCG00000006889	cwf19l2 (ENSLOCG00000006855)	ALKBH8 (ENSLOCG00000006833)	KBTBD3 (ENSLOCG00000006804)	elmod1 (ENSLOCG00000006784)	slc35f2 (ENSLOCG00000006766)	ENSLOCG00000006748	cul5a (ENSLOCG00000006732)	dcun1d5 (ENSLOCG00000006719)	ENSLOCG00000006704	ompa (ENSLOCG00000018219)	CAPN5 (ENSLOCG00000006677)	myo7aa (ENSLOCG00000006622)	GDPD4 (ENSLOCG00000006596)	pak1 (ENSLOCG00000006555)	aqp11 (ENSLOCG00000006538) ##22	clns1a (ENSLOCG00000006519)	RSF1 (ENSLOCG00000006488)	aamdc (ENSLOCG00000006465)	INTS4 (ENSLOCG00000006446)	KCTD14 (ENSLOCG00000006426)	ENSLOCG00000006405	ENSLOCG00000006376	FCHSD2 (ENSLOCG00000006328)	P2RY2 (ENSLOCG00000018217)	ARHGEF17 (ENSLOCG00000006306)	relt (ENSLOCG00000006269)	fam168a (ENSLOCG00000006237)	plekhb1 (ENSLOCG00000006222)	rab6a (ENSLOCG00000006205)	mrpl48 (ENSLOCG00000006190)
Osteoglossocephalai	ANCESTRAL SPECIES	12	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a
Clupeocephala	ANCESTRAL SPECIES	10	ENSGT00940000158563	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a ##22	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a
Euteleosteomorpha	ANCESTRAL SPECIES	235						ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.b	ENSGT00940000165195	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a
Acanthomorphata	ANCESTRAL SPECIES	208						ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	119					ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a
Percomorphaceae	ANCESTRAL SPECIES	111						ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a
Percomorphaceae_B	ANCESTRAL SPECIES	25						ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000163467.a.b.b.a.a	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a
Ovalentaria	ANCESTRAL SPECIES	8	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a
Ovalentaria_B	ANCESTRAL SPECIES	11	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a.m
Cichlidae	ANCESTRAL SPECIES	21	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00940000159792.C	ENSGT00530000063950.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	19	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560.e.b	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00940000159792.C	ENSGT00530000063950.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	15	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610.h	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00940000159792.C	ENSGT00530000063950.a.b
Haplochromini	ANCESTRAL SPECIES	15	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610.h	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00990000204560.e.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00530000063950.a.b
Burton s mouthbrooder	MODERN SPECIES	824							ENSHBUG00000020853	ENSHBUG00000020868	ENSHBUG00000020883	FAM222B (ENSHBUG00000020899)	flot2b (ENSHBUG00000020937)	myo7aa (ENSHBUG00000022404)	GDPD4 (ENSHBUG00000022514)	pak1 (ENSHBUG00000022588)	ENSHBUG00000022620	aqp11 (ENSHBUG00000022625) ##22	clns1a (ENSHBUG00000022647)	ENSHBUG00000022662
Haplochromini_A	ANCESTRAL SPECIES	23	ENSGT00980000198791.c	ENSGT00940000163630.A.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610.h	ENSGT00940000159610.g	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00530000063950.a.b	ENSGT00550000075007
P. nyererei	MODERN SPECIES	447																aqp11 (ENSPNYG00000021656) ##22	clns1a (ENSPNYG00000021669)	rhbdd1 (ENSPNYG00000021695)	SLC35F2 (ENSPNYG00000021715)	CUL5 (ENSPNYG00000021735)	dcun1d5 (ENSPNYG00000021783)	CAPN5 (ENSPNYG00000021803)	ompa (ENSPNYG00000021817)	ENSPNYG00000021835	panx1a (ENSPNYG00000021838)	ENSPNYG00000021877	DMWD (ENSPNYG00000021885)	hif1al (ENSPNYG00000021897)	zgc:152863 (ENSPNYG00000021908)	ENSPNYG00000021913	ccdc9 (ENSPNYG00000021926)
Haplochromini_B	ANCESTRAL SPECIES	27	ENSGT00940000158344.a.a	ENSGT00980000198791.c	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610.h	ENSGT00940000159610.g	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00990000204560.e.b.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00530000063950.a.b	ENSGT00550000075007
Zebra mbuna	MODERN SPECIES	1096	ENSMZEG00005024576	med17 (ENSMZEG00005024570)	ech1 (ENSMZEG00005024557)	ech1 (ENSMZEG00005024551)	ENSMZEG00005024549	ENSMZEG00005024541	FAM222B (ENSMZEG00005024538)	flot2b (ENSMZEG00005024534)	myo7aa (ENSMZEG00005024525)	ENSMZEG00005024519	ENSMZEG00005024514	ENSMZEG00005024512	PAK1 (ENSMZEG00005024502)	ENSMZEG00005024493	ENSMZEG00005024489	aqp11 (ENSMZEG00005024487) ##22	clns1a (ENSMZEG00005024486)	ENSMZEG00005024485	rhbdd1 (ENSMZEG00005024483)	SLC35F2 (ENSMZEG00005024481)	CUL5 (ENSMZEG00005024478)	dcun1d5 (ENSMZEG00005024475)	ompa (ENSMZEG00005024473)	CAPN5 (ENSMZEG00005024470)	panx1a (ENSMZEG00005024469)	ENSMZEG00005024463	DMWD (ENSMZEG00005024462)	hif1al (ENSMZEG00005024460)	zgc:152863 (ENSMZEG00005024458)	ENSMZEG00005024456	ccdc9 (ENSMZEG00005024453)
Eastern happy	MODERN SPECIES	5	med17 (ENSACLG00000015519)	ENSACLG00000015597	ech1 (ENSACLG00000015758)	ech1 (ENSACLG00000015797)	ENSACLG00000015823	ENSACLG00000015881	ENSACLG00000015899	ENSACLG00000015919	FAM222B (ENSACLG00000015970)	flot2b (ENSACLG00000015985)	myo7aa (ENSACLG00000016070)	ENSACLG00000016218	pak1 (ENSACLG00000016299)	ENSACLG00000016499	TUBA1B (ENSACLG00000016619)	aqp11 (ENSACLG00000016622) ##22	clns1a (ENSACLG00000016637)	ENSACLG00000016657	ENSACLG00000016676	rhbdd1 (ENSACLG00000016679)	SLC35F2 (ENSACLG00000016705)	CUL5 (ENSACLG00000016737)	dcun1d5 (ENSACLG00000016814)	CAPN5 (ENSACLG00000016887)	ompa (ENSACLG00000016938)	panx1a (ENSACLG00000016951)	ENSACLG00000017048	DMWD (ENSACLG00000017242)	hif1al (ENSACLG00000017298)	zgc:152863 (ENSACLG00000017388)	ENSACLG00000017394
Lyretail cichlid	MODERN SPECIES	426																aqp11 (ENSNBRG00000015759) ##22	clns1a (ENSNBRG00000015776)	SLC35F2 (ENSNBRG00000015825)	CUL5 (ENSNBRG00000015907)	ENSNBRG00000015948	ompa (ENSNBRG00000015957)	panx1a (ENSNBRG00000015971)	ENSNBRG00000016014	DMWD (ENSNBRG00000016057)	hif1al (ENSNBRG00000016073)	zgc:152863 (ENSNBRG00000016096)	ENSNBRG00000016107	ccdc9 (ENSNBRG00000016143)	ENSNBRG00000016288	sae1 (ENSNBRG00000016306)	ZC3H4 (ENSNBRG00000016333)
Nile tilapia	MODERN SPECIES	5	ENSONIG00000007777	CAPN5 (ENSONIG00000007780)	ompa (ENSONIG00000027393)	dcun1d5 (ENSONIG00000007785)	CUL5 (ENSONIG00000007790)	SLC35F2 (ENSONIG00000007791)	rhbdd1 (ENSONIG00000007794)	ENSONIG00000029211	ENSONIG00000031889	ENSONIG00000033112	myo7aa (ENSONIG00000001401)	GDPD4 (ENSONIG00000001422)	pak1 (ENSONIG00000001430)	ENSONIG00000037197	ENSONIG00000030723	aqp11 (ENSONIG00000028778) ##22	clns1a (ENSONIG00000017900)	ENSONIG00000042237	ENSONIG00000032173	flot2b (ENSONIG00000001396)	FAM222B (ENSONIG00000033941)	ENSONIG00000036315	ENSONIG00000027128	ENSONIG00000041162	ENSONIG00000034510	ENSONIG00000036242	ENSONIG00000034213	ENSONIG00000029177	ENSONIG00000001375	ech1 (ENSONIG00000035109)	ENSONIG00000030086
Midas cichlid	MODERN SPECIES	190								panx1a (ENSACIG00000017011)	CAPN5 (ENSACIG00000017053)	ompa (ENSACIG00000017078)	dcun1d5 (ENSACIG00000017085)	CUL5 (ENSACIG00000017101)	SLC35F2 (ENSACIG00000017127)	rhbdd1 (ENSACIG00000017141)	ENSACIG00000017154	aqp11 (ENSACIG00000017164) ##22	clns1a (ENSACIG00000017174)	ENSACIG00000017189	pak1 (ENSACIG00000017196)	ENSACIG00000017217	myo7aa (ENSACIG00000017244)	flot2b (ENSACIG00000017310)	FAM222B (ENSACIG00000017328)	vps53 (ENSACIG00000017348)	rflnb (ENSACIG00000017384)	dus4l (ENSACIG00000017392)	bcap29 (ENSACIG00000017407)	slco1c1 (ENSACIG00000017469)	PDE3A (ENSACIG00000017495)	ENSACIG00000017525	AIPL1 (ENSACIG00000017554)
Pomacentridae	ANCESTRAL SPECIES	27	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a.l	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063
Pomacentridae_A	ANCESTRAL SPECIES	143	ENSGT00940000165978	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00940000158330	ENSGT00940000155604	ENSGT00940000171017	ENSGT00940000165563.b	ENSGT00390000004912
Amphiprion	ANCESTRAL SPECIES	97	ENSGT00940000165978	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00940000158330	ENSGT00940000155604	ENSGT00940000171017	ENSGT00940000165563.b	ENSGT00390000004912	ENSGT00390000016972	ENSGT00940000155470.b	ENSGT00940000160400 #18	ENSGT01020000230608	ENSGT00950000182903.a.b.j	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000161729.n	ENSGT00730000111053
Orange clownfish	MODERN SPECIES	23	zgc:85932 (ENSAPEG00000017447)	ACTN4 (ENSAPEG00000017602)	ENSAPEG00000017671	slc8a2b (ENSAPEG00000017777)	srsf7a (ENSAPEG00000017818)	ENSAPEG00000017837	ENSAPEG00000017888	med17 (ENSAPEG00000017905)	ENSAPEG00000017954	ech1 (ENSAPEG00000017991)	FAM222B (ENSAPEG00000018015)	flot2b (ENSAPEG00000018024)	myo7aa (ENSAPEG00000018128)	GDPD4 (ENSAPEG00000018279)	pak1 (ENSAPEG00000018331)	aqp11 (ENSAPEG00000018404) ##22	clns1a (ENSAPEG00000018416)	LRCH3 (ENSAPEG00000018498)	ABCF3 (ENSAPEG00000018567)	ENSAPEG00000018642	ENSAPEG00000018652	polr2d (ENSAPEG00000018714)	ENSAPEG00000018728	rpl35a (ENSAPEG00000018771)	abcc5 (ENSAPEG00000018801)	rnpepl1 (ENSAPEG00000018895) #18	ENSAPEG00000018951	ENSAPEG00000018966	ap2m1b (ENSAPEG00000019075)	mmp23bb (ENSAPEG00000019113)	zgc:92744 (ENSAPEG00000019137)
Clown anemonefish	MODERN SPECIES	1367																aqp11 (ENSAOCG00000007596) ##22	clns1a (ENSAOCG00000000418)	ENSAOCG00000007529	LRCH3 (ENSAOCG00000007507)	ABCF3 (ENSAOCG00000007426)	ENSAOCG00000007356	ENSAOCG00000007342	polr2d (ENSAOCG00000007295)	rpl35a (ENSAOCG00000007269)	abcc5 (ENSAOCG00000007240)	rnpepl1 (ENSAOCG00000001967) #18	ENSAOCG00000007107	ENSAOCG00000007097	ap2m1b (ENSAOCG00000007028)	mmp23bb (ENSAOCG00000006964)	zgc:92744 (ENSAOCG00000006932)
Spiny chromis	MODERN SPECIES	1412														GDPD4 (ENSAPOG00000019718)	pak1 (ENSAPOG00000019704)	aqp11 (ENSAPOG00000019480) ##22	clns1a (ENSAPOG00000019476)	ENSAPOG00000019425	ENSAPOG00000019257
Bicolor damselfish	MODERN SPECIES	1534														ENSSPAG00000013474	ENSSPAG00000013457	aqp11 (ENSSPAG00000013426) ##22	clns1a (ENSSPAG00000013399)	polr2d (ENSSPAG00000013386)	ENSSPAG00000013290	ENSSPAG00000013269	ABCF3 (ENSSPAG00000013145)	LRCH3 (ENSSPAG00000013100)	rpl35a (ENSSPAG00000013060)	ENSSPAG00000013044	abcc5 (ENSSPAG00000012992)	rnpepl1 (ENSSPAG00000012958) #18	ENSSPAG00000012944	ENSSPAG00000012866	ap2m1b (ENSSPAG00000012833)	mmp23bb (ENSSPAG00000012793)
Atherinomorphae	ANCESTRAL SPECIES	15	ENSGT00940000165978	ENSGT00940000159343	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00940000177932
Cyprinodontiformes	ANCESTRAL SPECIES	12	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00530000064359.c.a.n	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00940000177932
Aplocheiloidei	ANCESTRAL SPECIES	84												ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00990000210326	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00940000159792.C	ENSGT00530000063950.a.b
Mangrove rivulus	MODERN SPECIES	394											ENSKMAG00000016815	flot2b (ENSKMAG00000016841)	myo7aa (ENSKMAG00000016911)	GDPD4 (ENSKMAG00000017128)	pak1 (ENSKMAG00000017175)	aqp11 (ENSKMAG00000017249) ##22	clns1a (ENSKMAG00000017291)	SLC35F2 (ENSKMAG00000017319)	CUL5 (ENSKMAG00000017341)	dcun1d5 (ENSKMAG00000017388)	CAPN5 (ENSKMAG00000017430)	ompa (ENSKMAG00000017479)	ENSKMAG00000017496	panx1a (ENSKMAG00000017522)
Turquoise killifish	MODERN SPECIES	1615															pak1 (ENSNFUG00015008411)	AQP11 (ENSNFUG00015008418) ##22	clns1a (ENSNFUG00015008422)	SLC35F2 (ENSNFUG00015008427)	ENSNFUG00015008438	DCUN1D5 (ENSNFUG00015008441)	OMPA (ENSNFUG00015008458)	ENSNFUG00015008462	ENSNFUG00015008477	ENSNFUG00015008497	ENSNFUG00015008498	hif1al (ENSNFUG00015008507)	zgc:152863 (ENSNFUG00015008538)	pak4 (ENSNFUG00015008541)	ENSNFUG00015008547	ENSNFUG00015008550	ccdc9 (ENSNFUG00015008556)
Cyprinodontoidei	ANCESTRAL SPECIES	9	ENSGT00940000157823	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00940000177932
Poeciliinae	ANCESTRAL SPECIES	14	ENSGT00940000157823	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00390000015063	ENSGT00390000014682
Poecilia	ANCESTRAL SPECIES	2	ENSGT00940000157823	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00390000015063	ENSGT00390000014682
NAME_6	ANCESTRAL SPECIES	14	ENSGT00940000157823	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00390000015063	ENSGT00390000014682
Sailfin molly	MODERN SPECIES	1063											ENSPLAG00000020158	myo7aa (ENSPLAG00000020549)	ENSPLAG00000020585	GDPD4 (ENSPLAG00000020635)	pak1 (ENSPLAG00000020697)	aqp11 (ENSPLAG00000020705) ##22	ENSPLAG00000020715
Amazon molly	MODERN SPECIES	300	HNRNPUL1 (ENSPFOG00000014230)	opa3 (ENSPFOG00000014228)	ppp1r13l (ENSPFOG00000014217)	ENSPFOG00000014214	exosc5 (ENSPFOG00000014158)	aamdc (ENSPFOG00000014143)	INTS4 (ENSPFOG00000013927)	ENSPFOG00000023884	KCTD14 (ENSPFOG00000013871)	rps3 (ENSPFOG00000013835)	zgc:171927 (ENSPFOG00000013810)	ENSPFOG00000013806	myo7aa (ENSPFOG00000013226)	GDPD4 (ENSPFOG00000013040)	pak1 (ENSPFOG00000012810)	aqp11 (ENSPFOG00000012789) ##22	clns1a (ENSPFOG00000012765)	SLC35F2 (ENSPFOG00000012711)	CUL5 (ENSPFOG00000012518)	dcun1d5 (ENSPFOG00000012446)	ompa (ENSPFOG00000012443)	CAPN5 (ENSPFOG00000012108)	ENSPFOG00000012002	panx1a (ENSPFOG00000011966)	bckdha (ENSPFOG00000011923)	ENSPFOG00000020475	napab (ENSPFOG00000011869)	BICRA (ENSPFOG00000011821)	EHD2 (ENSPFOG00000011756)	nup88 (ENSPFOG00000011735)	psmd8 (ENSPFOG00000011698)
Guppy	MODERN SPECIES	443	HNRNPUL1 (ENSPREG00000017804)	opa3 (ENSPREG00000017788)	ppp1r13l (ENSPREG00000017741)	TMEM91 (ENSPREG00000017731)	exosc5 (ENSPREG00000017723)	aamdc (ENSPREG00000017651)	INTS4 (ENSPREG00000017623)	ENSPREG00000017611	KCTD14 (ENSPREG00000017593)	rps3 (ENSPREG00000017536)	zgc:171927 (ENSPREG00000017517)	ENSPREG00000017495	myo7aa (ENSPREG00000017413)	GDPD4 (ENSPREG00000017372)	pak1 (ENSPREG00000017333)	aqp11 (ENSPREG00000017322) ##22	clns1a (ENSPREG00000017305)	SLC35F2 (ENSPREG00000017275)	CUL5 (ENSPREG00000017245)	dcun1d5 (ENSPREG00000017217)	ompa (ENSPREG00000017203)	CAPN5 (ENSPREG00000017184)	ENSPREG00000017168	panx1a (ENSPREG00000017142)	ENSPREG00000017119	prdm10 (ENSPREG00000017058)	ENSPREG00000017039	aplp2 (ENSPREG00000016991)	ENSPREG00000016523	dhx34 (ENSPREG00000016403)	spred3 (ENSPREG00000016378)
Platyfish	MODERN SPECIES	9	opa3 (ENSXMAG00000023043)	ppp1r13l (ENSXMAG00000004805)	ENSXMAG00000004802	exosc5 (ENSXMAG00000004786)	ENSXMAG00000022515	aamdc (ENSXMAG00000004784)	INTS4 (ENSXMAG00000004746)	ENSXMAG00000028328	KCTD14 (ENSXMAG00000027590)	rps3 (ENSXMAG00000004703)	zgc:171927 (ENSXMAG00000004683)	ENSXMAG00000004681	myo7aa (ENSXMAG00000004628)	GDPD4 (ENSXMAG00000029648)	pak1 (ENSXMAG00000004548)	aqp11 (ENSXMAG00000021051) ##22	clns1a (ENSXMAG00000004537)	SLC35F2 (ENSXMAG00000004522)	CUL5 (ENSXMAG00000004486)	dcun1d5 (ENSXMAG00000004471)	panx1a (ENSXMAG00000004464)	ENSXMAG00000007014	ompa (ENSXMAG00000029785)	CAPN5 (ENSXMAG00000006995)	ENSXMAG00000028342	ENSXMAG00000006987	flot2b (ENSXMAG00000006956)	FAM222B (ENSXMAG00000026087)	ENSXMAG00000006952	atp1b3b (ENSXMAG00000013010)	NYAP2 (ENSXMAG00000000867)
NAME_4	ANCESTRAL SPECIES	85	ENSGT01090000261501	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c.c	ENSGT00940000156155
Sheepshead minnow	MODERN SPECIES	457	ENSCVAG00000009437	opa3 (ENSCVAG00000009429)	ppp1r13l (ENSCVAG00000009418)	ENSCVAG00000009406	exosc5 (ENSCVAG00000009396)	aamdc (ENSCVAG00000009374)	INTS4 (ENSCVAG00000009362)	ENSCVAG00000009262	KCTD14 (ENSCVAG00000009254)	rps3 (ENSCVAG00000009247)	zgc:171927 (ENSCVAG00000009222)	ENSCVAG00000009207	myo7aa (ENSCVAG00000009198)	GDPD4 (ENSCVAG00000009074)	pak1 (ENSCVAG00000009047)	aqp11 (ENSCVAG00000009023) ##22	clns1a (ENSCVAG00000009019)	SLC35F2 (ENSCVAG00000009002)	CUL5 (ENSCVAG00000008893)	dcun1d5 (ENSCVAG00000008851)	CAPN5 (ENSCVAG00000008810)	ompa (ENSCVAG00000008778)	ENSCVAG00000008764	panx1a (ENSCVAG00000008753)
Mummichog	MODERN SPECIES	533													myo7aa (ENSFHEG00000008196)	GDPD4 (ENSFHEG00000008205)	pak1 (ENSFHEG00000008225)	aqp11 (ENSFHEG00000008231) ##22	clns1a (ENSFHEG00000000206)	ENSFHEG00000008260	CUL5 (ENSFHEG00000008268)	dcun1d5 (ENSFHEG00000008344)	ENSFHEG00000008403
Oryzias	ANCESTRAL SPECIES	8	ENSGT00940000175310	ENSGT00530000064411.a	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000156155	ENSGT00940000156648.c	ENSGT00940000166085	ENSGT00390000007686.a	ENSGT00940000160308	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000015655.a.m.a	ENSGT00940000165073.a.b.b.b.b	ENSGT00940000160509	ENSGT00940000168703	ENSGT00390000014810.a	ENSGT00940000156343.lb.a	ENSGT00950000183052.b.c.b.a.c.b	ENSGT00950000183052.b.c.b.a.c.a.a	ENSGT00940000159555.v.a	ENSGT00950000182772.A.a.a.b.r.b	ENSGT00940000167306	ENSGT00950000182970.C	ENSGT00940000165053	ENSGT00940000160011
Oryzias_b	ANCESTRAL SPECIES	14	ENSGT00530000064411.a	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000156155	ENSGT00940000156648.c	ENSGT00940000166085	ENSGT00390000007686.a	ENSGT00940000160308	ENSGT00940000158512.a.j	ENSGT00940000158512.a.i	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000015655.a.m.a
Indian medaka	MODERN SPECIES	12	CAPN5 (ENSOMEG00000001227)	ompa (ENSOMEG00000001224)	dcun1d5 (ENSOMEG00000001221)	CUL5 (ENSOMEG00000001217)	ENSOMEG00000001213	hif1al (ENSOMEG00000001208)	DMWD (ENSOMEG00000023807)	ENSOMEG00000023804	ENSOMEG00000023766	ENSOMEG00000023757	FAM222B (ENSOMEG00000023746)	flot2b (ENSOMEG00000023743)	myo7aa (ENSOMEG00000023739)	GDPD4 (ENSOMEG00000023712)	pak1 (ENSOMEG00000023697)	aqp11 (ENSOMEG00000023681) ##22	clns1a (ENSOMEG00000023661)	SLC35F2 (ENSOMEG00000023501)	ENSOMEG00000023492	ENSOMEG00000023487	ENSOMEG00000023472	ENSOMEG00000023462	ENSOMEG00000023453	ENSOMEG00000023431	kcnk6 (ENSOMEG00000023404)	ENSOMEG00000023386	blvrb (ENSOMEG00000023374)	ENSOMEG00000023361	ENSOMEG00000023348	ENSOMEG00000023331	ENSOMEG00000023310
Javanese ricefish	MODERN SPECIES	4	CAPN5 (ENSOJAG00000005778)	ompa (ENSOJAG00000006859)	dcun1d5 (ENSOJAG00000006865)	cul5a (ENSOJAG00000006958)	hif1al (ENSOJAG00000007882)	DMWD (ENSOJAG00000008302)	ENSOJAG00000008332	ENSOJAG00000008591	ENSOJAG00000008771	FAM222B (ENSOJAG00000008924)	flot2b (ENSOJAG00000008968)	myo7aa (ENSOJAG00000009540)	GDPD4 (ENSOJAG00000010079)	ENSOJAG00000010095	pak1 (ENSOJAG00000010240)	aqp11 (ENSOJAG00000011818) ##22	clns1a (ENSOJAG00000011826)	SLC35F2 (ENSOJAG00000011835)	ENSOJAG00000011871	ENSOJAG00000011921	ENSOJAG00000011930	ENSOJAG00000011934	kcnk6 (ENSOJAG00000011948)	ENSOJAG00000011954	blvrb (ENSOJAG00000011961)	ENSOJAG00000012466	ENSOJAG00000012494	ENSOJAG00000012519	MARK4 (ENSOJAG00000012712)	CKM (ENSOJAG00000014807)	ercc2 (ENSOJAG00000015767)
Oryzias_a	ANCESTRAL SPECIES	8	ENSGT00940000153972.A.a	ENSGT00530000064411.a	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000156155	ENSGT00940000156648.c	ENSGT00940000166085	ENSGT00390000007686.a	ENSGT00940000160308	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00390000015655.a.m.a	ENSGT00940000165073.a.b.b.b.b	ENSGT00940000160509	ENSGT00940000168703	ENSGT00390000014810.a	ENSGT00950000183052.b.c.b.a.c.b	ENSGT00950000183052.b.c.b.a.c.a.a	ENSGT00940000159555.v.a	ENSGT01070000253869	ENSGT00950000182772.A.a.a.b.r.b	ENSGT00940000167306	ENSGT00950000182970.C	ENSGT00940000165053	ENSGT00940000160011
Japanese Medaka HdrR	MODERN SPECIES	4	PANX (ENSORLG00000002140)	ENSORLG00000002117	ompa (ENSORLG00000029919)	CAPN5 (ENSORLG00000002081)	dcun1d5 (ENSORLG00000002056)	CUL5 (ENSORLG00000002038)	hif1al (ENSORLG00000002004)	DMWD (ENSORLG00000023682)	ENSORLG00000001987	ENSORLG00000029342	ENSORLG00000001959	ENSORLG00000001952	myo7aa (ENSORLG00000001941)	GDPD4 (ENSORLG00000001876)	pak1 (ENSORLG00000001860)	aqp11 (ENSORLG00000028601) ##22	clns1a (ENSORLG00000001811)	ENSORLG00000001787	ENSORLG00000028971	ENSORLG00000001764	kcnk6 (ENSORLG00000001728)	ENSORLG00000025193	ENSORLG00000025195	ENSORLG00000001689	ENSORLG00000025963	ENSORLG00000022704	ENSORLG00000001615	ENSORLG00000001611	CKM (ENSORLG00000030295)	klc3 (ENSORLG00000001581)	ercc2 (ENSORLG00000001570)
Chinese medaka	MODERN SPECIES	538	panx1a (ENSOSIG00000003822)	ENSOSIG00000003765	ompa (ENSOSIG00000017825)	CAPN5 (ENSOSIG00000017328)	dcun1d5 (ENSOSIG00000017311)	cul5a (ENSOSIG00000017293)	hif1al (ENSOSIG00000017162)	DMWD (ENSOSIG00000017148)	ENSOSIG00000017144	ENSOSIG00000017028	FAM222B (ENSOSIG00000017014)	flot2b (ENSOSIG00000017009)	myo7aa (ENSOSIG00000015631)	GDPD4 (ENSOSIG00000015583)	pak1 (ENSOSIG00000015442)	aqp11 (ENSOSIG00000015427) ##22	clns1a (ENSOSIG00000015425)	SLC35F2 (ENSOSIG00000015424)	ENSOSIG00000015421	kcnk6 (ENSOSIG00000015414)	ENSOSIG00000015412	blvrb (ENSOSIG00000015409)	ENSOSIG00000015396	MARK4 (ENSOSIG00000015171)	ENSOSIG00000015170	CKM (ENSOSIG00000015130)	klc3 (ENSOSIG00000013862)	ercc2 (ENSOSIG00000013851)	zgc:154093 (ENSOSIG00000013850)	sae1 (ENSOSIG00000013848)	ccdc9 (ENSOSIG00000013846)
Percomorphaceae_C	ANCESTRAL SPECIES	9	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000155987.b
Percomorphaceae_D	ANCESTRAL SPECIES	9	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00450000040324.a.a.b
Anabantaria	ANCESTRAL SPECIES	9	ENSGT00940000159610	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00450000040324.a.a.b	ENSGT00950000182843.a.a.a.b.a.b
Anabantoidei	ANCESTRAL SPECIES	29					ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00450000040324.a.a.b	ENSGT00950000182843.a.a.a.b.a.b
Climbing perch	MODERN SPECIES	4	ENSATEG00000004576	ENSATEG00000004510	ENSATEG00000004466	ENSATEG00000004449	ENSATEG00000029022	ENSATEG00000004378	ENSATEG00000004344	ENSATEG00000004310	ENSATEG00000004237	dcun1d5 (ENSATEG00000004210)	ompa (ENSATEG00000004196)	CAPN5 (ENSATEG00000004124)	myo7aa (ENSATEG00000003932)	GDPD4 (ENSATEG00000003826)	pak1 (ENSATEG00000003807)	aqp11 (ENSATEG00000030022) ##22	clns1a (ENSATEG00000003771)	ENSATEG00000003745	ENSATEG00000003736	ENSATEG00000003698	aamdc (ENSATEG00000003660)	ENSATEG00000003556	ENSATEG00000003549	KCTD14 (ENSATEG00000003545)	rps3 (ENSATEG00000003502)	ENSATEG00000003476	ENSATEG00000003462	ENSATEG00000003430	ENSATEG00000003410	ENSATEG00000029865	si:cabz01090165.1 (ENSATEG00000003302)
Siamese fighting fish	MODERN SPECIES	4	hnrnpl2 (ENSBSLG00000015246)	ech1 (ENSBSLG00000015752)	ENSBSLG00000016117	med17 (ENSBSLG00000016138)	ENSBSLG00000016181	dcun1d5 (ENSBSLG00000016189)	CUL5 (ENSBSLG00000016205)	SLC35F2 (ENSBSLG00000016327)	flot2b (ENSBSLG00000016335)	FAM222B (ENSBSLG00000016394)	CAPN5 (ENSBSLG00000016398)	ompa (ENSBSLG00000016442)	GDPD4 (ENSBSLG00000016520)	ENSBSLG00000016531	pak1 (ENSBSLG00000016540)	aqp11 (ENSBSLG00000017677) ##22
Zig-zag eel	MODERN SPECIES	4	ENSMAMG00000017237	ENSMAMG00000017227	ENSMAMG00000017250	ENSMAMG00000028672	ENSMAMG00000017314	ENSMAMG00000017320	ENSMAMG00000017352	ENSMAMG00000017414	dcun1d5 (ENSMAMG00000026934)	ENSMAMG00000017488	ompa (ENSMAMG00000017510)	myo7aa (ENSMAMG00000017522)	GDPD4 (ENSMAMG00000017991)	pak1 (ENSMAMG00000018022)	ENSMAMG00000018060	aqp11 (ENSMAMG00000018089) ##22	clns1a (ENSMAMG00000018069)	ENSMAMG00000018095	ENSMAMG00000018108	ENSMAMG00000018111	ENSMAMG00000018117	ENSMAMG00000028396	ENSMAMG00000026761	ENSMAMG00000018154	ENSMAMG00000018182	ENSMAMG00000018253	ENSMAMG00000018262	ENSMAMG00000025327	ENSMAMG00000018275	ENSMAMG00000018290	ENSMAMG00000018356
Carangaria	ANCESTRAL SPECIES	8	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00450000040324.a.a.b
Pleuronectoidei	ANCESTRAL SPECIES	35	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a
Turbot	MODERN SPECIES	15	farsb (ENSSMAG00000020668)	acsl3a (ENSSMAG00000020663)	kcne4 (ENSSMAG00000020661)	ENSSMAG00000020660	dhrs12la (ENSSMAG00000020608)	wdfy1 (ENSSMAG00000020603)	serpine2 (ENSSMAG00000020601)	prss16 (ENSSMAG00000020598)	ENSSMAG00000020589	ENSSMAG00000020563	ompa (ENSSMAG00000033320)	CAPN5 (ENSSMAG00000020557)	myo7aa (ENSSMAG00000020546)	ENSSMAG00000020537	pak1 (ENSSMAG00000020499)	aqp11 (ENSSMAG00000020497) ##22	clns1a (ENSSMAG00000020496)	ENSSMAG00000020495	gmps (ENSSMAG00000020489)	ENSSMAG00000020488	kcnab1a (ENSSMAG00000020485)	ssr3 (ENSSMAG00000023871)	TIPARP (ENSSMAG00000020479)	ENSSMAG00000022648	ENSSMAG00000029670	ENSSMAG00000020476	PTX3 (ENSSMAG00000020473)	ENSSMAG00000020466	ENSSMAG00000020463	ENSSMAG00000020457	ENSSMAG00000029459
Tongue sole	MODERN SPECIES	14	ech1 (ENSCSEG00000006411)	med17 (ENSCSEG00000006452)	ENSCSEG00000006458	ENSCSEG00000006465	ENSCSEG00000006476	FAM222B (ENSCSEG00000006481)	flot2b (ENSCSEG00000006488)	SLC35F2 (ENSCSEG00000006494)	CUL5 (ENSCSEG00000006499)	dcun1d5 (ENSCSEG00000006513)	CAPN5 (ENSCSEG00000006517)	ompa (ENSCSEG00000006525)	myo7aa (ENSCSEG00000006533)	GDPD4 (ENSCSEG00000006568)	pak1 (ENSCSEG00000006576)	aqp11 (ENSCSEG00000006605) ##22	clns1a (ENSCSEG00000006611)	ENSCSEG00000006620	panx1a (ENSCSEG00000006624)	spsb4a (ENSCSEG00000006639)	SLC25A36 (ENSCSEG00000006649)	pxylp1 (ENSCSEG00000006664)	epha4a (ENSCSEG00000006677)	cntn5 (ENSCSEG00000006697)	ARHGAP42 (ENSCSEG00000006717)	ENSCSEG00000006789	pgr (ENSCSEG00000006795)	trpc6a (ENSCSEG00000006802)	ENSCSEG00000006815	NECTIN1 (ENSCSEG00000006820)	ttc36 (ENSCSEG00000006840)
Carangaria_A	ANCESTRAL SPECIES	10	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00990000204173	ENSGT00940000163299.B.b.b.h.c.a
Seriola	ANCESTRAL SPECIES	38	ENSGT00940000159610	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000163467.a.b.b.a.a.h.a	ENSGT00940000164973	ENSGT00990000204173
Yellowtail amberjack	MODERN SPECIES	2532													ENSSLDG00000021851	GDPD4 (ENSSLDG00000021835)	pak1 (ENSSLDG00000021823)	aqp11 (ENSSLDG00000021807) ##22	clns1a (ENSSLDG00000021796)
Greater amberjack	MODERN SPECIES	14	med17 (ENSSDUG00000003561)	ENSSDUG00000003588	ENSSDUG00000003610	FAM222B (ENSSDUG00000003635)	flot2b (ENSSDUG00000003641)	rhbdd1 (ENSSDUG00000003679)	SLC35F2 (ENSSDUG00000003696)	CUL5 (ENSSDUG00000003721)	dcun1d5 (ENSSDUG00000003755)	CAPN5 (ENSSDUG00000003779)	ompa (ENSSDUG00000003820)	ENSSDUG00000003826	myo7aa (ENSSDUG00000003850)	GDPD4 (ENSSDUG00000003964)	pak1 (ENSSDUG00000003997)	aqp11 (ENSSDUG00000004063) ##22	clns1a (ENSSDUG00000004087)	RSF1 (ENSSDUG00000004112)	ENSSDUG00000004129	panx1a (ENSSDUG00000004139)	aamdc (ENSSDUG00000004148)	INTS4 (ENSSDUG00000004164)	KCTD14 (ENSSDUG00000004288)	rps3 (ENSSDUG00000004327)	ENSSDUG00000004417	ENSSDUG00000004426	zgc:171927 (ENSSDUG00000004445)	ENSSDUG00000004465	ENSSDUG00000004486	si:cabz01090165.1 (ENSSDUG00000004519)	ENSSDUG00000004681
Barramundi perch	MODERN SPECIES	59															pak1 (ENSLCAG00010023183)	aqp11 (ENSLCAG00010023196) ##22	clns1a (ENSLCAG00010023198)	panx1a (ENSLCAG00010023208)	aamdc (ENSLCAG00010023212)	INTS4 (ENSLCAG00010023228)	ENSLCAG00010023233	ITM2C (ENSLCAG00010023241)	lpar5b (ENSLCAG00010023244)	ENSLCAG00010023246	ENSLCAG00010023250	meis3 (ENSLCAG00010023261)	mvp (ENSLCAG00010023292)	CASKIN2 (ENSLCAG00010023315)	ST6GALNAC2 (ENSLCAG00010023319)	si:ch73-366l1.5 (ENSLCAG00010023323)	jmjd6 (ENSLCAG00010023324)
Eupercaria	ANCESTRAL SPECIES	7	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000155987.b	ENSGT00450000040324.a.a.b
Tetraodontidae	ANCESTRAL SPECIES	115																ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00390000015655.a.m.a	ENSGT00560000077232.B.g.a	ENSGT00530000063811.A.a.b	ENSGT00940000158512.a	ENSGT00970000193454	ENSGT00390000011810
Fugu	MODERN SPECIES	2	igsf11 (ENSTRUG00000010310)	ENSTRUG00000021402	GIT1 (ENSTRUG00000009923)	ankrd13b (ENSTRUG00000021746)	slc6a4a (ENSTRUG00000008917)	blmh (ENSTRUG00000008761)	fat3a (ENSTRUG00000008334)	ENSTRUG00000020398	hspa13 (ENSTRUG00000022313)	ENSTRUG00000025749	MMP28 (ENSTRUG00000020202)	taf15 (ENSTRUG00000007798)	porb (ENSTRUG00000007436)	tmem120ab (ENSTRUG00000007407)	gdpd1 (ENSTRUG00000007222)	aqp11 (ENSTRUG00000007188) ##22	clns1a (ENSTRUG00000007089)	ENSTRUG00000006905	panx1a (ENSTRUG00000006765)	aamdc (ENSTRUG00000021092)	INTS4 (ENSTRUG00000006471)	nccrp1 (ENSTRUG00000022576)	KCTD14 (ENSTRUG00000022906)	rps3 (ENSTRUG00000023549)	CAPN5 (ENSTRUG00000005683)	ompa (ENSTRUG00000006040)	SLC35F2 (ENSTRUG00000005526)	flot2b (ENSTRUG00000005208)	FAM222B (ENSTRUG00000005106)	ENSTRUG00000004689	ENSTRUG00000028563
Eupecaria_A	ANCESTRAL SPECIES	9	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000155987.b	ENSGT00450000040324.a.a.b
Ballan wrasse	MODERN SPECIES	200		hif1al (ENSLBEG00000010994)	zgc:152863 (ENSLBEG00000010953)	pak4 (ENSLBEG00000010883)	ccdc9 (ENSLBEG00000010829)	sae1 (ENSLBEG00000010775)	ZC3H4 (ENSLBEG00000010735)	zgc:154093 (ENSLBEG00000010700)	ercc2 (ENSLBEG00000010573)	klc3 (ENSLBEG00000010476)	CKM (ENSLBEG00000010410)	MARK4 (ENSLBEG00000010272)	myo7aa (ENSLBEG00000010075)	GDPD4 (ENSLBEG00000009985)	pak1 (ENSLBEG00000009841)	aqp11 (ENSLBEG00000009767) ##22	clns1a (ENSLBEG00000009737)	ENSLBEG00000009701	panx1a (ENSLBEG00000009670)	ENSLBEG00000009526	med17 (ENSLBEG00000009459)	ech1 (ENSLBEG00000009395)	ENSLBEG00000009182	FAM222B (ENSLBEG00000009142)	flot2b (ENSLBEG00000009104)	rhbdd1 (ENSLBEG00000008984)	SLC35F2 (ENSLBEG00000008933)	CUL5 (ENSLBEG00000008869)	dcun1d5 (ENSLBEG00000008824)	ompa (ENSLBEG00000008803)	CAPN5 (ENSLBEG00000008778)
Eupecaria_B	ANCESTRAL SPECIES	9	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000155987.b	ENSGT00450000040324.a.a.b
Eupecaria_C	ANCESTRAL SPECIES	7	ENSGT00670000099420	ENSGT00940000156844.a	ENSGT00940000155478.ib	ENSGT00950000182843.a.a.a.b.a.b	ENSGT00450000040324.a.a.b	ENSGT00940000155987.b	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000164973	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00530000064359.c.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000156648.c	ENSGT00390000015655.a.m.a	ENSGT00390000010744.m.d	ENSGT00560000077232.B.g.a
Gilthead seabream	MODERN SPECIES	11	RFFL (ENSSAUG00010003058)	eif4h (ENSSAUG00010003080)	ANO7 (ENSSAUG00010003089) #31	ece2b (ENSSAUG00010003155)	zgc:171927 (ENSSAUG00010003564)	ENSSAUG00010003567	ENSSAUG00010003573	ENSSAUG00010003576	ENSSAUG00010003578	ENSSAUG00010003580	myo7aa (ENSSAUG00010003617)	ENSSAUG00010004943	pak1 (ENSSAUG00010004958)	rhbdd1 (ENSSAUG00010005118)	ENSSAUG00010005122	aqp11 (ENSSAUG00010005126) ##22	clns1a (ENSSAUG00010005127)	RSF1 (ENSSAUG00010005129)	panx1a (ENSSAUG00010005133)	aamdc (ENSSAUG00010005135)	INTS4 (ENSSAUG00010005143)	ENSSAUG00010005556	KCTD14 (ENSSAUG00010005558)	rps3 (ENSSAUG00010005562)	dcun1d5 (ENSSAUG00010005671)	CAPN5 (ENSSAUG00010005676)	ompa (ENSSAUG00010005720)	ENSSAUG00010005721	CUL5 (ENSSAUG00010005742)	SLC35F2 (ENSSAUG00010006242)	ENSSAUG00010006244
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	5	ENSGT01000000214804	ENSGT00940000174800	ENSGT00670000099420	ENSGT00940000156844.a	ENSGT00940000155478.ib	ENSGT00950000182843.a.a.a.b.a.b	ENSGT00450000040324.a.a.b	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000164973	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00530000064359.c.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000156648.c	ENSGT00390000015655.a.m.a	ENSGT00390000010744.m.d	ENSGT00560000077232.B.g.a
European seabass	MODERN SPECIES	3	ENSDLAG00005012380	si:cabz01090165.1 (ENSDLAG00005012353)	ENSDLAG00005034310	ENSDLAG00005034071	ENSDLAG00005030844	ENSDLAG00005012104	ENSDLAG00005012093	ENSDLAG00005034976	ENSDLAG00005028926	myo7aa (ENSDLAG00005007604)	GDPD4 (ENSDLAG00005007565)	pak1 (ENSDLAG00005007216)	ENSDLAG00005015787	ENSDLAG00005006820	ENSDLAG00005003383	aqp11 (ENSDLAG00005031387) ##22	clns1a (ENSDLAG00005032077)	ENSDLAG00005030366	RSF1 (ENSDLAG00005007153)	ENSDLAG00005007136	ENSDLAG00005006323	ENSDLAG00005006285	ENSDLAG00005006256	KCTD14 (ENSDLAG00005006243)	rps3 (ENSDLAG00005006114)	ENSDLAG00005006108	ENSDLAG00005006082	ENSDLAG00005031445	ENSDLAG00005032013	ENSDLAG00005005420	ENSDLAG00005005085
Large yellow croaker	MODERN SPECIES	479	dharma (ENSLCRG00005008144)	ENSLCRG00005008141	ENSLCRG00005008139	zgc:162698 (ENSLCRG00005008138)	CAPNS1 (ENSLCRG00005008137)	zgc:101731 (ENSLCRG00005008136)	ENSLCRG00005008134	ENSLCRG00005008132	ENSLCRG00005008130	ENSLCRG00005008128	zgc:171927 (ENSLCRG00005008127)	ENSLCRG00005008126	myo7aa (ENSLCRG00005004902)	GDPD4 (ENSLCRG00005004869)	pak1 (ENSLCRG00005004795)	aqp11 (ENSLCRG00005004785) ##22	clns1a (ENSLCRG00005004782)	panx1a (ENSLCRG00005004777)	INTS4 (ENSLCRG00005003790)	ENSLCRG00005003764	KCTD14 (ENSLCRG00005003749)	rps3 (ENSLCRG00005003658)	ENSLCRG00005003655	ENSLCRG00005003654	dcun1d5 (ENSLCRG00005003651)	ompa (ENSLCRG00005003649)	CAPN5 (ENSLCRG00005002764)	CUL5 (ENSLCRG00005002641)	SLC35F2 (ENSLCRG00005002621)	ENSLCRG00005002565	rhbdd1 (ENSLCRG00005002545)
Perciformes	ANCESTRAL SPECIES	10	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b.d	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00450000040324.a.a.b	ENSGT00950000182843.a.a.a.b.a.b
Cottioidei	ANCESTRAL SPECIES	4	ENSGT00390000008610.a.a	ENSGT00940000160762	ENSGT00940000174101	ENSGT00390000010128	ENSGT00390000011958	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b.d	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00940000153972.A.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000166085	ENSGT00390000007686.a	ENSGT00940000160308	ENSGT00390000009409	ENSGT00940000165978	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b
Lumpfish	MODERN SPECIES	17	aamdc (ENSCLMG00005006752)	INTS4 (ENSCLMG00005006751)	ENSCLMG00005006749	KCTD14 (ENSCLMG00005006747)	rps3 (ENSCLMG00005006563)	FAM222B (ENSCLMG00005006558)	FLOT2 (ENSCLMG00005006552)	SLC35F2 (ENSCLMG00005006549)	CUL5 (ENSCLMG00005006228)	dcun1d5 (ENSCLMG00005006221)	CAPN5 (ENSCLMG00005005886)	ompa (ENSCLMG00005005874)	myo7aa (ENSCLMG00005005767)	GDPD4 (ENSCLMG00005005762)	pak1 (ENSCLMG00005005574)	aqp11 (ENSCLMG00005005571) ##22	clns1a (ENSCLMG00005005569)	panx1a (ENSCLMG00005005567)	ENSCLMG00005005561	ENSCLMG00005005535	ENSCLMG00005005532	ENSCLMG00005005530	ENSCLMG00005005528	ENSCLMG00005005526	ENSCLMG00005005517	med17 (ENSCLMG00005005498)	ENSCLMG00005005491	ech1 (ENSCLMG00005005418)	hif1al (ENSCLMG00005004934)	DMWD (ENSCLMG00005004908)	MAP4K1 (ENSCLMG00005004901)
Perciformes_a	ANCESTRAL SPECIES	9	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b.d	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00940000153972.A.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000174101	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000174501	ENSGT00450000040324.a.a.b	ENSGT00950000182843.a.a.a.b.a.b
Pike perch	MODERN SPECIES	19	ENSSLUG00000018373	SLC35F2 (ENSSLUG00000018367)	CUL5 (ENSSLUG00000018340)	ENSSLUG00000018324	dcun1d5 (ENSSLUG00000018317)	ENSSLUG00000018314	ompa (ENSSLUG00000018310)	CAPN5 (ENSSLUG00000017823)	ENSSLUG00000017806	pak1 (ENSSLUG00000017778)	ENSSLUG00000017766	gjc4b (ENSSLUG00000017764)	myo7aa (ENSSLUG00000017628)	ENSSLUG00000017567	ZNF229 (ENSSLUG00000017559)	aqp11 (ENSSLUG00000017552) ##22	clns1a (ENSSLUG00000017545)	ENSSLUG00000017534	PANX1 (ENSSLUG00000017519)	ENSSLUG00000017451	med17 (ENSSLUG00000017389)	ENSSLUG00000017363	ech1 (ENSSLUG00000016754)	hnrnpl2 (ENSSLUG00000016429)	srsf7a (ENSSLUG00000016399)	ENSSLUG00000016142	ENSSLUG00000016105	ENSSLUG00000016101	ACTN4 (ENSSLUG00000014943)	zgc:85932 (ENSSLUG00000014858)	eif3k (ENSSLUG00000014840)
Channel bull blenny	MODERN SPECIES	4	ENSCGOG00000006041	med17 (ENSCGOG00000006060)	ENSCGOG00000006584	FAM222B (ENSCGOG00000006737)	flot2b (ENSCGOG00000006759)	SLC35F2 (ENSCGOG00000007156)	CUL5 (ENSCGOG00000007165)	dcun1d5 (ENSCGOG00000007492)	CAPN5 (ENSCGOG00000007507)	ompa (ENSCGOG00000008387)	myo7aa (ENSCGOG00000008392)	GDPD4 (ENSCGOG00000008462)	ENSCGOG00000008466	pak1 (ENSCGOG00000008467)	ENSCGOG00000008468	aqp11 (ENSCGOG00000008470) ##22	clns1a (ENSCGOG00000008472)	RSF1 (ENSCGOG00000008475)	panx1a (ENSCGOG00000008497)	aamdc (ENSCGOG00000008509)	INTS4 (ENSCGOG00000008524)	ENSCGOG00000009075	KCTD14 (ENSCGOG00000009080)	rps3 (ENSCGOG00000009090)	ENSCGOG00000009226	ENSCGOG00000009229	zgc:171927 (ENSCGOG00000009232)	si:cabz01090165.1 (ENSCGOG00000009245)	bcas3 (ENSCGOG00000009269)	ENSCGOG00000009693	tbx2b (ENSCGOG00000009709)
Pinecone sodierfish	MODERN SPECIES	4	hif1al (ENSMMDG00005006858)	DMWD (ENSMMDG00005006861)	ENSMMDG00005006862	ENSMMDG00005006866	eif3k (ENSMMDG00005006872)	zgc:85932 (ENSMMDG00005006890)	ACTN4 (ENSMMDG00005006914)	dcun1d5 (ENSMMDG00005007816)	CUL5 (ENSMMDG00005007828)	SLC35F2 (ENSMMDG00005007945)	CAPN5 (ENSMMDG00005007977)	ompa (ENSMMDG00005009663)	myo7aa (ENSMMDG00005009670)	pak1 (ENSMMDG00005009696)	ENSMMDG00005010469	aqp11 (ENSMMDG00005010472) ##22	clns1a (ENSMMDG00005001164)	ENSMMDG00005001178	ENSMMDG00005001203	SPTBN4 (ENSMMDG00005001948)	blvrb (ENSMMDG00005017067)	ENSMMDG00005017068	kcnk6 (ENSMMDG00005017070)	ENSMMDG00005017074	HIPK4 (ENSMMDG00005017080)	PLD3 (ENSMMDG00005017094)	foxa3 (ENSMMDG00005017101)	irf2bp1 (ENSMMDG00005017105)	polr1g (ENSMMDG00005017108)	ENSMMDG00005017111	ENSMMDG00005017118
Cod	MODERN SPECIES	7	ENSGMOG00000001656	ENSGMOG00000001631	frem2b (ENSGMOG00000001576)	trpc4b (ENSGMOG00000001551)	postnb (ENSGMOG00000001525)	spartb (ENSGMOG00000001489)	dclk1b (ENSGMOG00000001463)	mab21l1 (ENSGMOG00000029011)	NBEA (ENSGMOG00000026728)	ENSGMOG00000014281	ENSGMOG00000004486	trmt9b (ENSGMOG00000024098)	ENSGMOG00000009727	ENSGMOG00000009699	ENSGMOG00000035107	ENSGMOG00000026810 ##22	ENSGMOG00000002760	ENSGMOG00000002731	ENSGMOG00000019367	rasgrp4 (ENSGMOG00000019397)	ENSGMOG00000019404	opa3 (ENSGMOG00000019407)	ENSGMOG00000035950	ENSGMOG00000027778	ENSGMOG00000034209	ppp1r13l (ENSGMOG00000024946)	ENSGMOG00000029331	ENSGMOG00000032588	ENSGMOG00000037074	ENSGMOG00000034922	ENSGMOG00000036305
Protacanthopterygii	ANCESTRAL SPECIES	81	ENSGT00940000175843.b	ENSGT00950000183061.a.b.a.a	ENSGT00940000157403	ENSGT00390000004912	ENSGT00940000165563.b	ENSGT00940000171017	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c.b	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.b	ENSGT00390000008610.a.b.b.b	ENSGT00510000046732.A.c	ENSGT01100000263504.a.b.a.b.a.a	ENSGT00940000164977.a	ENSGT00390000002548	ENSGT00940000155573.g.b	ENSGT00510000048626	ENSGT00940000155478.hb.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b	ENSGT00950000182985.a.b.a	ENSGT01030000234613.b.b.h
Salmoninae	ANCESTRAL SPECIES	49			ENSGT00390000004912.b	ENSGT00940000165563.b	ENSGT00940000171017.c	ENSGT00530000063882.b.lb.b	ENSGT00940000158415	ENSGT00390000015655.a.m.a.e	ENSGT00940000156648.c.b.a	ENSGT00940000156155.l	ENSGT00390000009497.b.c	ENSGT00940000155350.g.f	ENSGT00940000156251.a.k.b	ENSGT00940000156536.e.b.a	ENSGT00950000182988.a.b.a.k	ENSGT00530000063816.c.b ##22	ENSGT00390000010063.ob.b	ENSGT00530000064411.a.d	ENSGT00530000063860.b.c.d	ENSGT01060000248594.e.b.a.c	ENSGT00940000155313.g.b.f.b	ENSGT00940000155739.yb.a.b	ENSGT00940000158173.f.m	ENSGT00940000155128.a.a.a.a.c	ENSGT00950000183040.A.a.c.b.f.a	ENSGT00940000163671.a.a.b.d	ENSGT00950000182970.A.a.j	ENSGT00940000158882.c	ENSGT00940000158439.m.f	ENSGT00390000006454.l	ENSGT00390000006454.k.b.a
Huchen	MODERN SPECIES	2616														ENSHHUG00000015051	pak1 (ENSHHUG00000015072)	aqp11 (ENSHHUG00000015158) ##22	clns1a (ENSHHUG00000015169)	ENSHHUG00000015228	ENSHHUG00000015230	ENSHHUG00000015232	postnb (ENSHHUG00000015281)	ENSHHUG00000015361	frem2b (ENSHHUG00000015561)	ENSHHUG00000015569
Salmoninae_a	ANCESTRAL SPECIES	3	ENSGT00940000160762	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000167717	ENSGT00940000165563.b	ENSGT00940000171017.c	ENSGT00530000063882.b.lb.b	ENSGT00940000158415	ENSGT00390000015655.a.m.a.e	ENSGT00940000156648.c.b.a	ENSGT00940000156155.l	ENSGT00940000156536.e.b.a	ENSGT00390000009497.b.c	ENSGT00940000155350.g.f	ENSGT00940000156251.a.k.b	ENSGT00950000182988.a.b.a.k	ENSGT00530000063816.c.b ##22	ENSGT00390000010063.ob.b	ENSGT00530000064411.a.d	ENSGT00530000063860.b.c.d	ENSGT01060000248594.e.b.a.c	ENSGT00940000155313.g.b.f.b	ENSGT00940000155739.yb.a.b	ENSGT00940000158173.f.m	ENSGT00940000155128.a.a.a.a.c	ENSGT00950000183040.A.a.c.b.f.a	ENSGT00940000163671.a.a.b.d	ENSGT00950000182970.A.a.j	ENSGT00940000158882.c	ENSGT00940000158439.m.f	ENSGT00390000006454.l	ENSGT00390000015210.t
Salmo	ANCESTRAL SPECIES	22	ENSGT01050000244827.C.c.a.b.f	ENSGT00950000183061.a.b.a.a.c	ENSGT00390000004912.b.b	ENSGT00940000165563.b	ENSGT00940000171017.c	ENSGT00530000063882.b.lb.b	ENSGT00940000158415	ENSGT00390000015655.a.m.a.e	ENSGT00940000156648.c.b.a	ENSGT00940000156155.l	ENSGT00940000156536.e.b.a	ENSGT00390000009497.b.c	ENSGT00940000155350.g.f	ENSGT00940000156251.a.k.b	ENSGT00950000182988.a.b.a.k	ENSGT00530000063816.c.b ##22	ENSGT00390000010063.ob.b	ENSGT00530000064411.a.d	ENSGT00530000063860.b.c.d	ENSGT01060000248594.e.b.a.c	ENSGT00940000155313.g.b.f.b	ENSGT00940000155739.yb.a.b	ENSGT00940000158173.f.m	ENSGT00940000155128.a.a.a.a.c	ENSGT00950000183040.A.a.c.b.f.a	ENSGT00940000163671.a.a.b.d	ENSGT00950000182970.A.a.j	ENSGT00940000158882.c	ENSGT00940000158439.m.f	ENSGT00390000006454.l	ENSGT00390000015210.t
Atlantic salmon	MODERN SPECIES	28	NBEA (ENSSSAG00000068625)	mab21l1 (ENSSSAG00000074770)	ENSSSAG00000074842	ENSSSAG00000075709	dus14 (ENSSSAG00000114256)	ENSSSAG00000075712	ENSSSAG00000116236	kbtbd3 (ENSSSAG00000038039)	ENSSSAG00000098691	dcun1d5 (ENSSSAG00000039214)	ENSSSAG00000039372	ompa (ENSSSAG00000092292)	myo7aa (ENSSSAG00000041134)	GDPD4 (ENSSSAG00000043424)	pak1 (ENSSSAG00000043512)	aqp11 (ENSSSAG00000099004) ##22	ENSSSAG00000043850	RSF1 (ENSSSAG00000043901)	postnb (ENSSSAG00000043962)	trpc4b (ENSSSAG00000044670)	frem2b (ENSSSAG00000046296)	ENSSSAG00000046962	ENSSSAG00000047165	ENSSSAG00000088807	ENSSSAG00000051381	ENSSSAG00000051481	tbx4 (ENSSSAG00000053630)	ENSSSAG00000086327	bcas3 (ENSSSAG00000053793)	prpf8 (ENSSSAG00000063849)	ENSSSAG00000063991
River trout	MODERN SPECIES	4	NBEA (ENSSTUG00000035161)	mab21l1 (ENSSTUG00000039954)	ENSSTUG00000040028	polr2d (ENSSTUG00000041843)	ENSSTUG00000041871	ENSSTUG00000041888	ENSSTUG00000041905	KBTBD3 (ENSSTUG00000041914)	SLC35F2 (ENSSTUG00000041945)	CUL5 (ENSSTUG00000042001)	dcun1d5 (ENSSTUG00000042348)	CAPN5 (ENSSTUG00000042435)	ompa (ENSSTUG00000042678)	myo7aa (ENSSTUG00000042836)	pak1 (ENSSTUG00000044264)	aqp11 (ENSSTUG00000044749) ##22	clns1a (ENSSTUG00000044753)	ENSSTUG00000044762	ENSSTUG00000044779	postnb (ENSSTUG00000044797)	ENSSTUG00000045098	trpc4b (ENSSTUG00000045130)	frem2b (ENSSTUG00000045470)	ENSSTUG00000045972	TRIM3 (ENSSTUG00000046322)	ENSSTUG00000046406	arfip2b (ENSSTUG00000046421)	ENSSTUG00000046507	brip1 (ENSSTUG00000046703)	tbx4 (ENSSTUG00000046844)	tbx2b (ENSSTUG00000046859)
Oncorhynchus	ANCESTRAL SPECIES	14	ENSGT00950000183023.B.h.b.a	ENSGT00940000160762	ENSGT00390000008610.a.b.b.a.b.a	ENSGT00940000167717	ENSGT00940000165563.b	ENSGT00940000171017.c	ENSGT00530000063882.b.lb.b	ENSGT00940000158415	ENSGT00390000015655.a.m.a.e	ENSGT00940000156648.c.b.a	ENSGT00940000156155.l	ENSGT00940000156536.e.b.a	ENSGT00390000009497.b.c	ENSGT00940000156251.a.k.b	ENSGT00950000182988.a.b.a.k	ENSGT00530000063816.c.b ##22	ENSGT00390000010063.ob.b	ENSGT00530000064411.a.d	ENSGT00530000063860.b.c.d	ENSGT01060000248594.e.b.a.c	ENSGT00940000155313.g.b.f.b	ENSGT00940000155739.yb.a.b	ENSGT00940000158173.f.m	ENSGT00940000155128.a.a.a.a.c	ENSGT00950000183040.A.a.c.b.f.a	ENSGT00940000163671.a.a.b.d	ENSGT00940000158882.c	ENSGT00940000158439.m.f	ENSGT00390000006454.l	ENSGT00390000015210.t	ENSGT00940000161117.e
Oncorhynchus_a	ANCESTRAL SPECIES	32	ENSGT00950000183023.B.h.b.a	ENSGT00940000160762	ENSGT00390000008610.a.b.b.a.b.a	ENSGT00940000167717	ENSGT00940000165563.b	ENSGT00940000171017.c	ENSGT00530000063882.b.lb.b	ENSGT00940000158415	ENSGT00390000015655.a.m.a.e	ENSGT00940000156648.c.b.a	ENSGT00940000156155.l	ENSGT00940000156536.e.b.a	ENSGT00390000009497.b.c	ENSGT00940000156251.a.k.b	ENSGT00950000182988.a.b.a.k	ENSGT00530000063816.c.b ##22	ENSGT00390000010063.ob.b	ENSGT00530000064411.a.d	ENSGT00940000175310	ENSGT00530000063860.b.c.d	ENSGT01060000248594.e.b.a.c	ENSGT00940000155313.g.b.f.b	ENSGT00940000155739.yb.a.b	ENSGT00940000158173.f.m	ENSGT00940000155128.a.a.a.a.c	ENSGT00950000183040.A.a.c.b.f.a	ENSGT00940000163671.a.a.b.d	ENSGT00940000158882.c	ENSGT00940000158439.m.f	ENSGT00390000006454.l	ENSGT00390000015210.t
Chinook salmon	MODERN SPECIES	5	aamdc (ENSOTSG00005035887)	panx1a (ENSOTSG00005035890)	spartb (ENSOTSG00005035893)	dclk1b (ENSOTSG00005035911)	NBEA (ENSOTSG00005037362)	mab21l1 (ENSOTSG00005037844)	ENSOTSG00005037847	KBTBD3 (ENSOTSG00005037852)	SLC35F2 (ENSOTSG00005037853)	CUL5 (ENSOTSG00005037860)	dcun1d5 (ENSOTSG00005037874)	CAPN5 (ENSOTSG00005038107)	ompa (ENSOTSG00005038113)	GDPD4 (ENSOTSG00005038115)	pak1 (ENSOTSG00005038117)	aqp11 (ENSOTSG00005001633) ##22	clns1a (ENSOTSG00005001690)	ENSOTSG00005001691	ENSOTSG00005001694	postnb (ENSOTSG00005001703)	trpc4b (ENSOTSG00005001716)	frem2b (ENSOTSG00005001728)	ENSOTSG00005001732	ENSOTSG00005001735	TRIM3 (ENSOTSG00005001748)	ENSOTSG00005001751	ARFIP2 (ENSOTSG00005001769)	ENSOTSG00005001928	tbx4 (ENSOTSG00005002497)	tbx2b (ENSOTSG00005002498)	bcas3 (ENSOTSG00005002512)
Coho salmon	MODERN SPECIES	9	NBEA (ENSOKIG00005032089)	ENSOKIG00005031617	ENSOKIG00005031158	ENSOKIG00005031048	ENSOKIG00005031028	ENSOKIG00005031013	ENSOKIG00005020127	KBTBD3 (ENSOKIG00005020046)	SLC35F2 (ENSOKIG00005020003)	CUL5 (ENSOKIG00005019842)	dcun1d5 (ENSOKIG00005019767)	ompa (ENSOKIG00005019750)	CAPN5 (ENSOKIG00005019501)	GDPD4 (ENSOKIG00005019461)	pak1 (ENSOKIG00005018630)	aqp11 (ENSOKIG00005018552) ##22	clns1a (ENSOKIG00005018540)	ENSOKIG00005018526	ENSOKIG00005018515	postnb (ENSOKIG00005015318)	trpc4b (ENSOKIG00005015018)	frem2b (ENSOKIG00005014800)	ENSOKIG00005014710	ENSOKIG00005014676	TRIM3 (ENSOKIG00005013768)	ENSOKIG00005013653	ARFIP2 (ENSOKIG00005013577)	ENSOKIG00005012955	tbx4 (ENSOKIG00005012877)	TBX2 (ENSOKIG00005012824)	bcas3 (ENSOKIG00005012694)
Rainbow trout	MODERN SPECIES	16	ENSOMYG00000075222	ENSOMYG00000019793	ENSOMYG00000060110	ENSOMYG00000019890	ENSOMYG00000019895	ENSOMYG00000019900	ENSOMYG00000019903	ENSOMYG00000019911	ENSOMYG00000019922	ENSOMYG00000019949	dcun1d5 (ENSOMYG00000020008)	ENSOMYG00000020043	ompa (ENSOMYG00000020059)	GDPD4 (ENSOMYG00000048005)	pak1 (ENSOMYG00000020105)	aqp11 (ENSOMYG00000020274) ##22	ENSOMYG00000020291	ENSOMYG00000020303	postnb (ENSOMYG00000020373)	trpc4b (ENSOMYG00000020525)	frem2b (ENSOMYG00000020588)	ENSOMYG00000060933	ENSOMYG00000020906	ENSOMYG00000021050	ENSOMYG00000021101	ENSOMYG00000021188	tbx4 (ENSOMYG00000021245)	ENSOMYG00000021258	bcas3 (ENSOMYG00000021401)	ENSOMYG00000048416	ENSOMYG00000021445
Northern pike	MODERN SPECIES		ilkap (ENSELUG00000005893)	polr2d (ENSELUG00000034039)	ENSELUG00000000180	ENSELUG00000001203	ENSELUG00000005955	KBTBD3 (ENSELUG00000005963)	SLC35F2 (ENSELUG00000000190)	CUL5 (ENSELUG00000005991)	dcun1d5 (ENSELUG00000006028)	ompa (ENSELUG00000006051)	CAPN5 (ENSELUG00000006067)	myo7aa (ENSELUG00000006190)	GDPD4 (ENSELUG00000000200)	ENSELUG00000027264	pak1 (ENSELUG00000006340)	aqp11 (ENSELUG00000006371) ##22	clns1a (ENSELUG00000006405)	ENSELUG00000006420	ENSELUG00000006456	postnb (ENSELUG00000006518)	trpc4b (ENSELUG00000006559)	frem2b (ENSELUG00000006617)	ENSELUG00000006742	TRIM3 (ENSELUG00000001183)	ENSELUG00000006816	arfip2b (ENSELUG00000006852)	ENSELUG00000033648	ENSELUG00000006887	ENSELUG00000006903	ENSELUG00000006918	ENSELUG00000006928
Otomorpha	ANCESTRAL SPECIES	58	ENSGT00390000016972	ENSGT00940000155470.b	ENSGT00940000160400 #18	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a	ENSGT00940000158681.a
Otophysi	ANCESTRAL SPECIES	134	ENSGT00940000155470.b	ENSGT00940000160400 #18	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00940000180202	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a	ENSGT00940000158681.a
Characiphysae	ANCESTRAL SPECIES	66	ENSGT00940000155470.b	ENSGT00940000160400 #18	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00940000180202	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a	ENSGT00940000158681.a
Channel catfish	MODERN SPECIES	23	sema3ab (ENSIPUG00000006565)	sema3d (ENSIPUG00000006546)	grm3 (ENSIPUG00000006501)	elapor2a (ENSIPUG00000006479)	tmem243a (ENSIPUG00000006469)	gan (ENSIPUG00000006434)	cmip (ENSIPUG00000006302)	PLCG2 (ENSIPUG00000006196)	tldc1 (ENSIPUG00000006165)	COTL1 (ENSIPUG00000006136)	klhl36 (ENSIPUG00000006104)	zgc:56622 (ENSIPUG00000006082)	tat (ENSIPUG00000006050)	ENSIPUG00000006039	pak1 (ENSIPUG00000006002)	aqp11 (ENSIPUG00000005985) ##22	clns1a (ENSIPUG00000005935)	RSF1 (ENSIPUG00000005914)	aamdc (ENSIPUG00000005882)	ints4 (ENSIPUG00000005782)	KCTD14 (ENSIPUG00000005769)	rps3 (ENSIPUG00000005685)	ENSIPUG00000005660	fchsd2 (ENSIPUG00000005570)	P2RY2 (ENSIPUG00000005544)	P2RY2 (ENSIPUG00000005517)	relt (ENSIPUG00000005497)	arhgef17 (ENSIPUG00000005456)	P2RY3 (ENSIPUG00000005431)	ENSIPUG00000005416	ENSIPUG00000005392
Characiphysae_b	ANCESTRAL SPECIES	72	ENSGT00940000155470.b	ENSGT00940000160400 #18	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00940000180202	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a	ENSGT00940000158681.a
Characoidei	ANCESTRAL SPECIES	76	ENSGT00940000155470.b	ENSGT00940000160400 #18	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00940000180202	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00940000157637.a
Red-bellied piranha	MODERN SPECIES	98												myo7aa (ENSPNAG00000018151)	ENSPNAG00000018200	GDPD4 (ENSPNAG00000018223)	pak1 (ENSPNAG00000018299)	aqp11 (ENSPNAG00000018325) ##22	clns1a (ENSPNAG00000018394)	RSF1 (ENSPNAG00000018419)	aamdc (ENSPNAG00000018443)	INTS4 (ENSPNAG00000018579)	KCTD14 (ENSPNAG00000018601)	rps3 (ENSPNAG00000018641)	ENSPNAG00000018673	FCHSD2 (ENSPNAG00000018820)	P2RY2 (ENSPNAG00000018838)	relt (ENSPNAG00000018870)	ARHGEF17 (ENSPNAG00000018902)	P2RY6 (ENSPNAG00000018920)	ENSPNAG00000018929	ENSPNAG00000018960	ENSPNAG00000018977
Mexicana tetra	MODERN SPECIES	115	abcc5 (ENSAMXG00000014147)	rnpepl1 (ENSAMXG00000029654) #18	ENSAMXG00000031190	DVL3 (ENSAMXG00000014040)	ap2m1b (ENSAMXG00000014011)	mmp23bb (ENSAMXG00000032267)	pcyt1ab (ENSAMXG00000013963)	serp1 (ENSAMXG00000042435)	eif2a (ENSAMXG00000013924)	dcun1d5 (ENSAMXG00000013901)	ompa (ENSAMXG00000026326)	capn5a (ENSAMXG00000013893)	ENSAMXG00000030631	GDPD4 (ENSAMXG00000013818)	pak1 (ENSAMXG00000013796)	aqp11 (ENSAMXG00000031970) ##22	clns1a (ENSAMXG00000013761)	RSF1 (ENSAMXG00000013740)	aamdc (ENSAMXG00000013718)	INTS4 (ENSAMXG00000013679)	ENSAMXG00000043500	KCTD14 (ENSAMXG00000030590)	rps3 (ENSAMXG00000013642)	ENSAMXG00000043130	ENSAMXG00000036448	FCHSD2 (ENSAMXG00000013591)	P2RY2 (ENSAMXG00000040207)	relt (ENSAMXG00000033275)	ARHGEF17 (ENSAMXG00000013562)	P2RY6 (ENSAMXG00000026325)	ENSAMXG00000013543
Electric eel	MODERN SPECIES	134				ENSEEEG00000023646	DVL3 (ENSEEEG00000023644)	ap2m1b (ENSEEEG00000023634)	mmp23bb (ENSEEEG00000023630)	pcyt1ab (ENSEEEG00000023605)	serp1 (ENSEEEG00000023601)	eif2a (ENSEEEG00000023596)	dcun1d5 (ENSEEEG00000023587)	capn5a (ENSEEEG00000023586)	myo7aa (ENSEEEG00000023580)	GDPD4 (ENSEEEG00000023572)	pak1 (ENSEEEG00000023532)	aqp11 (ENSEEEG00000023526) ##22	clns1a (ENSEEEG00000023523)	ENSEEEG00000023518	aamdc (ENSEEEG00000023516)	INTS4 (ENSEEEG00000023515)	KCTD14 (ENSEEEG00000023513)	ENSEEEG00000023509	ENSEEEG00000023507	FCHSD2 (ENSEEEG00000023467)	P2RY2 (ENSEEEG00000023463)	relt (ENSEEEG00000023462)	ARHGEF17 (ENSEEEG00000023460)	P2RY6 (ENSEEEG00000023459)	ENSEEEG00000023458	ENSEEEG00000023456	SLITRK3 (ENSEEEG00000023455)
Cyprinoidei	ANCESTRAL SPECIES	138						ENSGT00940000158330	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00940000180202	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b.g	ENSGT01030000234621.C.a.a.b.h	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	243	ENSGT00940000166643.d	ENSGT00940000156218.k.a	ENSGT00940000155174.f.`b.b	ENSGT00390000010760.e.b.c.a	ENSGT00390000010760.e.b.d.b.a	ENSGT00940000158330.w	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155.j	ENSGT00940000156536.e.a.i.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000166878	ENSGT00940000156251.a.a.a	ENSGT00950000182988.a.b.a.d	ENSGT00530000063816.c.b.a ##22	ENSGT00390000010063.qb.a	ENSGT00530000064411.a.b	ENSGT00390000011958.u	ENSGT00390000010128.y	ENSGT00390000008610.a.a.c.a	ENSGT00510000046732.A.d.a	ENSGT01030000234621.C.a.a.b.h.b	ENSGT00940000160350.h
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	37	rab27a (ENSCARG00000038350)	ENSCARG00000038371	UNC13C (ENSCARG00000038514)	cdh7a (ENSCARG00000039408)	si:dkey-14d8.7 (ENSCARG00000039452)	ENSCARG00000053433	ENSCARG00000053519	serp1 (ENSCARG00000055217)	eif2a (ENSCARG00000055288)	dcun1d5 (ENSCARG00000055779)	capn5a (ENSCARG00000055845)	ompa (ENSCARG00000056164)	ENSCARG00000056175	GDPD4 (ENSCARG00000056300)	pak1 (ENSCARG00000056359)	aqp11 (ENSCARG00000056843) ##22	clns1a (ENSCARG00000056853)	mlycd (ENSCARG00000056868)	rfx4 (ENSCARG00000056887)	ric8b (ENSCARG00000057023)	ENSCARG00000057062	ENSCARG00000057077	skor1b (ENSCARG00000057106)	ENSCARG00000057132	aagab (ENSCARG00000057137)	smad3b (ENSCARG00000057166)	smad6b (ENSCARG00000057432)	snapc5 (ENSCARG00000057463)	LCTL (ENSCARG00000057492)	rpl4 (ENSCARG00000057625)	map2k1 (ENSCARG00000057706)
Goldfish	MODERN SPECIES	336																aqp11 (ENSCARG00000039927) ##22	clns1a (ENSCARG00000039937)	RSF1 (ENSCARG00000040091)	aamdc (ENSCARG00000040107)	rps3 (ENSCARG00000040121)	FCHSD2 (ENSCARG00000040241)	P2RY2 (ENSCARG00000040746)	P2RY2 (ENSCARG00000039671)	relt (ENSCARG00000039682)	ARHGEF17 (ENSCARG00000039710)	P2RY6 (ENSCARG00000040055)	fam168a (ENSCARG00000040062)
Cyprininae_a	ANCESTRAL SPECIES	70	ENSGT00940000155943.a.d	ENSGT00530000063948.b	ENSGT00940000156218.k.a	ENSGT00940000155174.f.`b.b	ENSGT00390000010760.e.b.c.a	ENSGT00390000010760.e.b.d.b.a	ENSGT00940000158330.w	ENSGT00940000162467.a.a	ENSGT00730000111053	ENSGT00940000156155.j	ENSGT00940000156536.e.a.i.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a.a.a	ENSGT00950000182988.a.b.a.d	ENSGT00530000063816.c.b.a ##22	ENSGT00390000010063.qb.a	ENSGT00530000064411.a.b	ENSGT00390000011958.u	ENSGT00390000010128.y	ENSGT00390000008610.a.a.c.a	ENSGT00510000046732.A.d.a	ENSGT01030000234621.C.a.a.b.h.b	ENSGT00940000160350.h	ENSGT00940000153798.B.j	ENSGT01030000234621.C.a.b.b	ENSGT00390000005140.a.b	ENSGT00940000157637.a.b	ENSGT00940000178700	ENSGT00940000158681.a.f	ENSGT00940000164162.i.a
Common carp reference	MODERN SPECIES	9	ENSCCRG00000058915	pigb (ENSCCRG00000021788)	ENSCCRG00000021785	ENSCCRG00000056199	ENSCCRG00000074708	ENSCCRG00000039023	ENSCCRG00000038888	ENSCCRG00000038868	eif2a (ENSCCRG00000038858)	dcun1d5 (ENSCCRG00000038840)	capn5a (ENSCCRG00000045407)	ompa (ENSCCRG00000063471)	myo7aa (ENSCCRG00000067841)	GDPD4 (ENSCCRG00000037451)	pak1 (ENSCCRG00000053253)	aqp11 (ENSCCRG00000021499) ##22	clns1a (ENSCCRG00000018899)	RSF1 (ENSCCRG00000063602)	aamdc (ENSCCRG00000058236)	INTS4 (ENSCCRG00000016334)	rps3 (ENSCCRG00000018292)	ENSCCRG00000018454	ENSCCRG00000076272	ENSCCRG00000079795	relt (ENSCCRG00000067376)	ENSCCRG00000051351	ARHGEF17 (ENSCCRG00000082091)	P2RY6 (ENSCCRG00000063902)	ENSCCRG00000069648	ENSCCRG00000058092	ENSCCRG00000064077
Golden-line barbel	MODERN SPECIES	3851																aqp11 (ENSSGRG00000007557) ##22
Cyprininae	ANCESTRAL SPECIES	337	ENSGT00940000156218.k.b	ENSGT00950000183090.A	ENSGT00940000166643.c	ENSGT00940000168208	ENSGT00390000004930	ENSGT00940000155943.a.c	ENSGT00940000160924.d	ENSGT00390000000707.y.b.a	ENSGT00390000003210.d	ENSGT00940000154415.lb.a.a.a	ENSGT00940000159496.k.d.b	ENSGT00940000159100.g.e.a	ENSGT00940000156195.q.b.h	ENSGT00940000154743.B.o.a.h	ENSGT00950000182988.a.b.a.c	ENSGT00530000063816.c.b.b ##22	ENSGT00390000010063.rb	ENSGT00530000064411.a.a	ENSGT00390000011958.v	ENSGT00390000010128.z	ENSGT00940000160762	ENSGT00390000008610.a.a.d	ENSGT00940000165320	ENSGT00510000046732.A.d.b	ENSGT01030000234621.C.a.a.b.g	ENSGT01030000234621.C.a.a.b.h.a	ENSGT00940000160350.g	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b.a	ENSGT00390000005140.a.a
Cyprininae_a	ANCESTRAL SPECIES	25	ENSGT00940000156218.k.b	ENSGT00950000183090.A	ENSGT00940000166643.c	ENSGT00940000168208	ENSGT00390000004930	ENSGT00940000155943.a.c	ENSGT00940000160924.d	ENSGT00390000000707.y.b.a	ENSGT00390000003210.d	ENSGT00940000154415.lb.a.a.a	ENSGT00940000159496.k.d.b	ENSGT00940000159100.g.e.a	ENSGT00940000156195.q.b.h	ENSGT00940000154743.B.o.a.h	ENSGT00950000182988.a.b.a.c	ENSGT00530000063816.c.b.b ##22	ENSGT00390000010063.rb	ENSGT00530000064411.a.a	ENSGT00390000011958.v	ENSGT00390000010128.z	ENSGT00940000160762	ENSGT00390000008610.a.a.d	ENSGT00940000165320	ENSGT00510000046732.A.d.b	ENSGT01030000234621.C.a.a.b.g	ENSGT01030000234621.C.a.a.b.h.a	ENSGT00940000160350.g	ENSGT00940000153798.B.i	ENSGT01030000234621.C.a.b.a	ENSGT00390000005140.a.a	ENSGT00940000157637.a.a
Golden-line barbel	MODERN SPECIES	181	nedd4a (ENSSGRG00000048326)	wtip (ENSSGRG00000048318)	gpib (ENSSGRG00000048206)	GARRE1 (ENSSGRG00000047958)	ss18l2 (ENSSGRG00000047956)	ENSSGRG00000047955	lsm14ab (ENSSGRG00000047947)	ENSSGRG00000047943	KCTD15 (ENSSGRG00000047940)	CHST8 (ENSSGRG00000047938)	pepd (ENSSGRG00000047937)	ugt5f1 (ENSSGRG00000047935)	nptnb (ENSSGRG00000047934)	ENSSGRG00000047932	pak1 (ENSSGRG00000046226)	aqp11 (ENSSGRG00000046199) ##22	clns1a (ENSSGRG00000046196)	RSF1 (ENSSGRG00000046193)	aamdc (ENSSGRG00000046192)	INTS4 (ENSSGRG00000046050)	KCTD14 (ENSSGRG00000046043)	rps3 (ENSSGRG00000045989)	ENSSGRG00000045979	FCHSD2 (ENSSGRG00000045924)	P2RY2 (ENSSGRG00000045921)	P2RY2 (ENSSGRG00000045920)	relt (ENSSGRG00000045919)	ARHGEF17 (ENSSGRG00000045918)	ENSSGRG00000045917	P2RY6 (ENSSGRG00000045916)	fam168a (ENSSGRG00000045914)
Common carp reference	MODERN SPECIES	19	dnaaf4 (ENSCCRG00000049321)	ENSCCRG00000049324	PRTG (ENSCCRG00000007016)	nedd4a (ENSCCRG00000002006)	wtip (ENSCCRG00000082254)	gpib (ENSCCRG00000049335)	ENSCCRG00000049696	lsm14ab (ENSCCRG00000049558)	ENSCCRG00000049526	KCTD15 (ENSCCRG00000082235)	CHST8 (ENSCCRG00000074768)	PEPD (ENSCCRG00000079116)	nptnb (ENSCCRG00000002739)	ENSCCRG00000073550	pak1 (ENSCCRG00000025855)	aqp11 (ENSCCRG00000076976) ##22	clns1a (ENSCCRG00000067103)	RSF1 (ENSCCRG00000054713)	aamdc (ENSCCRG00000018471)	INTS4 (ENSCCRG00000018932)	rps3 (ENSCCRG00000018907)	ENSCCRG00000018459	ENSCCRG00000077876	ENSCCRG00000074022	ENSCCRG00000048135	relt (ENSCCRG00000021521)	ENSCCRG00000021502	P2RY6 (ENSCCRG00000072292)	ENSCCRG00000082068	ENSCCRG00000058914	ENSCCRG00000058594
Goldfish	MODERN SPECIES	9	ENSCARG00000005683	dnaaf4 (ENSCARG00000005696)	PRTG (ENSCARG00000005754)	nedd4a (ENSCARG00000006092)	wtip (ENSCARG00000009919)	gpib (ENSCARG00000009953)	GARRE1 (ENSCARG00000010023)	lsm14ab (ENSCARG00000010099)	ENSCARG00000010168	KCTD15 (ENSCARG00000010178)	CHST8 (ENSCARG00000010190)	ENSCARG00000010229	nptnb (ENSCARG00000010456)	pak1 (ENSCARG00000010506)	ENSCARG00000010691	aqp11 (ENSCARG00000010698) ##22	clns1a (ENSCARG00000010708)	RSF1 (ENSCARG00000010736)	aamdc (ENSCARG00000010749)	INTS4 (ENSCARG00000010795)	KCTD14 (ENSCARG00000011600)	ENSCARG00000011615	ENSCARG00000011707	FCHSD2 (ENSCARG00000011798)	P2RY2 (ENSCARG00000012926)	P2RY2 (ENSCARG00000012931)	relt (ENSCARG00000012935)	ARHGEF17 (ENSCARG00000012944)	P2RY6 (ENSCARG00000012976)	fam168a (ENSCARG00000012987)	glg1b (ENSCARG00000013064)
Zebrafish	MODERN SPECIES	9	ENSDARG00000111801	serpini1 (ENSDARG00000034168)	pdcd10a (ENSDARG00000035054)	ENSDARG00000069723	LRCH3 (ENSDARG00000100679)	serp1 (ENSDARG00000099439)	ENSDARG00000111944	eif2a (ENSDARG00000101061)	dcun1d5 (ENSDARG00000100363)	ENSDARG00000101159	ompa (ENSDARG00000105218)	capn5a (ENSDARG00000103317)	myo7aa (ENSDARG00000099871)	GDPD4 (ENSDARG00000102447)	pak1 (ENSDARG00000103959)	aqp11 (ENSDARG00000100555) ##22	clns1a (ENSDARG00000103027)	aamdc (ENSDARG00000103957)	INTS4 (ENSDARG00000102953)	KCTD14 (ENSDARG00000110240)	rps3 (ENSDARG00000103007)	ENSDARG00000098597	ENSDARG00000111693	fam168a (ENSDARG00000098832)	ARHGEF17 (ENSDARG00000101644)	relt (ENSDARG00000099724)	P2RY2 (ENSDARG00000104425)	P2RY2 (ENSDARG00000104927)	P2RY2 (ENSDARG00000099915)	ENSDARG00000110183	ENSDARG00000112435
Clupeiformes	ANCESTRAL SPECIES	59	ENSGT00920000149180.b.g	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT00940000162662	ENSGT00940000160033.c	ENSGT00390000012368	ENSGT00390000007046.b.a.b	ENSGT00940000166445	ENSGT00940000156536.e.a.i	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a	ENSGT00940000158681.a
Atlantic herring	MODERN SPECIES	25	LRRC75A (ENSCHAG00000008495)	crk (ENSCHAG00000008508)	ENSCHAG00000008527	ENSCHAG00000008594	ENSCHAG00000008616	itpkcb (ENSCHAG00000008682)	zgc:153119 (ENSCHAG00000008699)	snrpa (ENSCHAG00000008709)	ENSCHAG00000008734	capn5a (ENSCHAG00000008755)	ompa (ENSCHAG00000008985)	myo7aa (ENSCHAG00000009132)	GDPD4 (ENSCHAG00000013956)	ENSCHAG00000013967	pak1 (ENSCHAG00000014021)	aqp11 (ENSCHAG00000014540) ##22	clns1a (ENSCHAG00000014547)	RSF1 (ENSCHAG00000014555)	aamdc (ENSCHAG00000014623)	INTS4 (ENSCHAG00000014647)	KCTD14 (ENSCHAG00000015537)	rps3 (ENSCHAG00000015551)	paf1 (ENSCHAG00000015847)	GMFG (ENSCHAG00000016414)	zgc:172323 (ENSCHAG00000016429)	zgc:172323 (ENSCHAG00000016487)	zgc:172323 (ENSCHAG00000016570)	ENSCHAG00000016638	zgc:172323 (ENSCHAG00000016645)	SAMD4B (ENSCHAG00000016717)	ENSCHAG00000017054
Denticle herring	MODERN SPECIES	10	dhrs13b.2 (ENSDCDG00000027527)	smtnl (ENSDCDG00000027528)	tmem199 (ENSDCDG00000027530)	poldip2 (ENSDCDG00000027539)	LRRC75A (ENSDCDG00000027781)	crk (ENSDCDG00000027784)	itpkcb (ENSDCDG00000027789)	zgc:153119 (ENSDCDG00000027799)	snrpa (ENSDCDG00000027805)	ENSDCDG00000027809	capn5a (ENSDCDG00000027848)	ompa (ENSDCDG00000028404)	myo7aa (ENSDCDG00000028451)	GDPD4 (ENSDCDG00000029741)	pak1 (ENSDCDG00000029768)	aqp11 (ENSDCDG00000030631) ##22	clns1a (ENSDCDG00000030632)	ENSDCDG00000030635	INTS4 (ENSDCDG00000030636)	aamdc (ENSDCDG00000030638)	KCTD14 (ENSDCDG00000030639)	rps3 (ENSDCDG00000030642)	ENSDCDG00000030648	FCHSD2 (ENSDCDG00000030668)	P2RY2 (ENSDCDG00000031234)	relt (ENSDCDG00000031237)	ARHGEF17 (ENSDCDG00000031247)	P2RY6 (ENSDCDG00000031254)	fam168a (ENSDCDG00000031256)	ENSDCDG00000031259	ENSDCDG00000031261
Osteoglossiformes	ANCESTRAL SPECIES	14	ENSGT00940000159575	ENSGT00940000155677.b.d	ENSGT00440000039469	ENSGT00940000157765	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000159782.b	ENSGT00940000156648.a.b	ENSGT00940000156155.m	ENSGT00390000009497	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a.a	ENSGT00530000063816.c.b ##22	ENSGT00390000010063	ENSGT00530000064411.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.c	ENSGT00940000160350	ENSGT01030000234621.C.a.a.b	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a.s	ENSGT00940000157637.a	ENSGT00940000158681
Asian bonytongue	MODERN SPECIES	1		MSANTD4 (ENSSFOG00015003258)	GUCY1A2 (ENSSFOG00015030640)	cwf19l2 (ENSSFOG00015003191)	ALKBH8 (ENSSFOG00015003173)	KBTBD3 (ENSSFOG00015003156)	elmod1 (ENSSFOG00015003065)	ENSSFOG00015003009	dcun1d5 (ENSSFOG00015002982)	ENSSFOG00015002972	ompa (ENSSFOG00015024542)	CAPN5 (ENSSFOG00015002892)	myo7aa (ENSSFOG00015002698)	GDPD4 (ENSSFOG00015002682)	pak1 (ENSSFOG00015002635)	aqp11 (ENSSFOG00015032092) ##22	clns1a (ENSSFOG00015002589)	RSF1 (ENSSFOG00015002501)	aamdc (ENSSFOG00015029619)	INTS4 (ENSSFOG00015002354)	KCTD14 (ENSSFOG00015002323)	rps3 (ENSSFOG00015002290)	ENSSFOG00015002286	FCHSD2 (ENSSFOG00015002267)	relt (ENSSFOG00015031194)	ARHGEF17 (ENSSFOG00015027586)	P2RY6 (ENSSFOG00015033260)	fam168a (ENSSFOG00015031466)	ENSSFOG00015002162	ENSSFOG00015002120	ENSSFOG00015002099
P. kingsleyae	MODERN SPECIES	46	ENSPKIG00000023564	ENSPKIG00000023582	GUCY1A2 (ENSPKIG00000023593)	cwf19l2 (ENSPKIG00000023622)	ALKBH8 (ENSPKIG00000023662)	KBTBD3 (ENSPKIG00000023695)	SLC35F2 (ENSPKIG00000023710)	CUL5 (ENSPKIG00000023730)	dcun1d5 (ENSPKIG00000023773)	ENSPKIG00000023806	CAPN5 (ENSPKIG00000023819)	ompa (ENSPKIG00000023839)	myo7aa (ENSPKIG00000023866)	GDPD4 (ENSPKIG00000023910)	pak1 (ENSPKIG00000023941)	aqp11 (ENSPKIG00000023955) ##22	clns1a (ENSPKIG00000023965)	RSF1 (ENSPKIG00000023983)	aamdc (ENSPKIG00000024002)	INTS4 (ENSPKIG00000024017)	rps3 (ENSPKIG00000024046)	KCTD14 (ENSPKIG00000024063)	ENSPKIG00000024081	FCHSD2 (ENSPKIG00000024091)	relt (ENSPKIG00000024107)	P2RY2 (ENSPKIG00000024120)	ARHGEF17 (ENSPKIG00000024134)	P2RY6 (ENSPKIG00000024152)	fam168a (ENSPKIG00000024158)	ENSPKIG00000024183	SLITRK3 (ENSPKIG00000024192)
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	12	ENSECRG00000002636	ALKBH8 (ENSECRG00000002603)	KBTBD3 (ENSECRG00000002576)	elmod1 (ENSECRG00000002565)	slc35f2 (ENSECRG00000002549)	ENSECRG00000002534	cul5a (ENSECRG00000002478)	dcun1d5 (ENSECRG00000002439)	ompa (ENSECRG00000002422)	ENSECRG00000002416	capn5a (ENSECRG00000002390)	myo7aa (ENSECRG00000002333)	GDPD4 (ENSECRG00000002290)	pak1 (ENSECRG00000002211)	aqp11 (ENSECRG00000002139) ##22	aqp11 (ENSECRG00000002116) ##22	clns1a (ENSECRG00000002093)	RSF1 (ENSECRG00000002059)	aamdc (ENSECRG00000002029)	INTS4 (ENSECRG00000001992)	KCTD14 (ENSECRG00000001975)	rps3 (ENSECRG00000001888)	ENSECRG00000001810	FCHSD2 (ENSECRG00000001743)	P2RY2 (ENSECRG00000001687)	ENSECRG00000001651	P2RY2 (ENSECRG00000001644)	P2RY2 (ENSECRG00000001636)	P2RY6 (ENSECRG00000001625)	dnajb13 (ENSECRG00000001431)	ARHGEF17 (ENSECRG00000001332)
Reedfish	MODERN SPECIES	12	GUCY1A2 (ENSECRG00000002651)	ENSECRG00000002636	ALKBH8 (ENSECRG00000002603)	KBTBD3 (ENSECRG00000002576)	elmod1 (ENSECRG00000002565)	slc35f2 (ENSECRG00000002549)	ENSECRG00000002534	cul5a (ENSECRG00000002478)	dcun1d5 (ENSECRG00000002439)	ompa (ENSECRG00000002422)	ENSECRG00000002416	capn5a (ENSECRG00000002390)	myo7aa (ENSECRG00000002333)	GDPD4 (ENSECRG00000002290)	pak1 (ENSECRG00000002211)	aqp11 (ENSECRG00000002139) ##22	aqp11 (ENSECRG00000002116) ##22	clns1a (ENSECRG00000002093)	RSF1 (ENSECRG00000002059)	aamdc (ENSECRG00000002029)	INTS4 (ENSECRG00000001992)	KCTD14 (ENSECRG00000001975)	rps3 (ENSECRG00000001888)	ENSECRG00000001810	FCHSD2 (ENSECRG00000001743)	P2RY2 (ENSECRG00000001687)	ENSECRG00000001651	P2RY2 (ENSECRG00000001644)	P2RY2 (ENSECRG00000001636)	P2RY6 (ENSECRG00000001625)	dnajb13 (ENSECRG00000001431)
Sarcopterygii	ANCESTRAL SPECIES	247										ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A
Tetrapoda	ANCESTRAL SPECIES		ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Amniota	ANCESTRAL SPECIES		ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Mammalia	ANCESTRAL SPECIES	7	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Theria	ANCESTRAL SPECIES	15	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Eutheria	ANCESTRAL SPECIES	3	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00530000063516.a.a.c.b	ENSGT00940000169601	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00530000063516.a.a.c.b	ENSGT00940000169601	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Glires	ANCESTRAL SPECIES	1	ENSGT00530000063516.a.a.c.b	ENSGT00940000169601	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Rodentia_B	ANCESTRAL SPECIES	33	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Myomorpha	ANCESTRAL SPECIES	13	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Muroidea	ANCESTRAL SPECIES	12	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Muroidea_A	ANCESTRAL SPECIES		ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Cricetidae	ANCESTRAL SPECIES	1	ENSGT01030000234582.f.a.b	ENSGT00390000012877.d	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958.b	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Cricetinae	ANCESTRAL SPECIES	15	ENSGT01030000234582.f.a.b	ENSGT00390000012877.d	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958.b	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692
Golden Hamster	MODERN SPECIES	660	Uvrag (ENSMAUG00000022039)	Wnt11 (ENSMAUG00000008427)	Thap12 (ENSMAUG00000000897)	ENSMAUG00000013228	Emsy (ENSMAUG00000017757)	ENSMAUG00000017794	Gucy2d (ENSMAUG00000010563)	Tsku (ENSMAUG00000014311)	Acer3 (ENSMAUG00000021627)	B3gnt6 (ENSMAUG00000016711)	Omp (ENSMAUG00000017325)	Capn5 (ENSMAUG00000017431)	Myo7a (ENSMAUG00000002971)	Gdpd4 (ENSMAUG00000014553)	Pak1 (ENSMAUG00000010646)	Aqp11 (ENSMAUG00000010913) ##22	Clns1a (ENSMAUG00000019637)	Rsf1 (ENSMAUG00000009412)	Aamdc (ENSMAUG00000001048)	Ints4 (ENSMAUG00000007877)	Kctd14 (ENSMAUG00000015696)	Thrsp (ENSMAUG00000013848)	Ndufc2 (ENSMAUG00000009562)	Alg8 (ENSMAUG00000012899)	Usp35 (ENSMAUG00000003032)	ENSMAUG00000008257	Nars2 (ENSMAUG00000002138)	Tenm4 (ENSMAUG00000019277)	ENSMAUG00000019787	ENSMAUG00000020090	ENSMAUG00000017096
Chinese hamster chok1gshd	MODERN SPECIES	101	Mogat2 (ENSCGRG00001004764)	Dgat2 (ENSCGRG00001020895)	Uvrag (ENSCGRG00001006874)	Wnt11 (ENSCGRG00001022788)	Thap12 (ENSCGRG00001021774)	ENSCGRG00001019331	Lrrc32 (ENSCGRG00001007026)	Gucy2d (ENSCGRG00001012034)	Tsku (ENSCGRG00001012773)	ENSCGRG00001024060	Acer3 (ENSCGRG00001013571)	B3gnt6 (ENSCGRG00001000647)	Capn5 (ENSCGRG00001021666)	Myo7a (ENSCGRG00001014824)	Pak1 (ENSCGRG00001022975)	Aqp11 (ENSCGRG00001017793) ##22	Clns1a (ENSCGRG00001015805)	Rsf1 (ENSCGRG00001008301)	Aamdc (ENSCGRG00001016432)	ENSCGRG00001012029	Ints4 (ENSCGRG00001017981)	ENSCGRG00001018658	Thrsp (ENSCGRG00001006063)	Ndufc2 (ENSCGRG00001017125)	Alg8 (ENSCGRG00001012346)	Kctd21 (ENSCGRG00001007277)	Usp35 (ENSCGRG00001015950)	Gab2 (ENSCGRG00001012091)	Nars2 (ENSCGRG00001014939)	ENSCGRG00001010169	Tenm4 (ENSCGRG00001023459)
Cricetidae_B	ANCESTRAL SPECIES	26	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877.d	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00940000165195	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958.b	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Prairie vole	MODERN SPECIES	9	Mogat2 (ENSMOCG00000007716)	Dgat2 (ENSMOCG00000012378)	Uvrag (ENSMOCG00000016758)	Wnt11 (ENSMOCG00000021029)	Thap12 (ENSMOCG00000021908)	Emsy (ENSMOCG00000008098)	Lrrc32 (ENSMOCG00000017378)	Gucy2d (ENSMOCG00000003117)	Tsku (ENSMOCG00000007489)	Acer3 (ENSMOCG00000014380)	B3gnt6 (ENSMOCG00000010357)	Capn5 (ENSMOCG00000015250)	Myo7a (ENSMOCG00000009126)	Gdpd4 (ENSMOCG00000019089)	Pak1 (ENSMOCG00000012909)	Aqp11 (ENSMOCG00000015165) ##22	ENSMOCG00000015937	Rsf1 (ENSMOCG00000018606)	Aamdc (ENSMOCG00000013242)	Ints4 (ENSMOCG00000015641)	Thrsp (ENSMOCG00000014398)	Ndufc2 (ENSMOCG00000014768)	Alg8 (ENSMOCG00000018035)	Kctd21 (ENSMOCG00000009332)	Usp35 (ENSMOCG00000015178)	Gab2 (ENSMOCG00000016973)	Nars2 (ENSMOCG00000004938)	Tenm4 (ENSMOCG00000007967)	ENSMOCG00000007773	Prss23 (ENSMOCG00000022033)	Me3 (ENSMOCG00000005796)
Northern American deer mouse	MODERN SPECIES		Thap12 (ENSPEMG00000013204)	Emsy (ENSPEMG00000023648)	Lrrc32 (ENSPEMG00000024699)	ENSPEMG00000026314	ENSPEMG00000028876	ENSPEMG00000024681	Tsku (ENSPEMG00000028771)	Acer3 (ENSPEMG00000020360)	ENSPEMG00000028950	B3gnt6 (ENSPEMG00000016161)	Capn5 (ENSPEMG00000008442)	Myo7a (ENSPEMG00000015770)	Gdpd4 (ENSPEMG00000017863)	Pak1 (ENSPEMG00000008661)	ENSPEMG00000026666	Aqp11 (ENSPEMG00000000856) ##22	ENSPEMG00000030074	Clns1a (ENSPEMG00000009380)	Rsf1 (ENSPEMG00000014926)	ENSPEMG00000024853	Aamdc (ENSPEMG00000014432)	Kctd14 (ENSPEMG00000020478)	Thrsp (ENSPEMG00000020398)	Ndufc2 (ENSPEMG00000020962)	Alg8 (ENSPEMG00000020484)	Kctd21 (ENSPEMG00000024492)	ENSPEMG00000024646	Usp35 (ENSPEMG00000016188)	ENSPEMG00000018108	Nars2 (ENSPEMG00000012439)	Tenm4 (ENSPEMG00000020624)
Murinae	ANCESTRAL SPECIES		ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Mus	ANCESTRAL SPECIES		ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Mus_A	ANCESTRAL SPECIES	1	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Mus_B	ANCESTRAL SPECIES		ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Mouse	MODERN SPECIES	16	Dgat2 (ENSMUSG00000030747)	Uvrag (ENSMUSG00000035354)	Wnt11 (ENSMUSG00000015957)	Thap12 (ENSMUSG00000030753)	Emsy (ENSMUSG00000035401)	Lrrc32 (ENSMUSG00000090958)	Gucy2d (ENSMUSG00000074003)	Tsku (ENSMUSG00000049580)	Acer3 (ENSMUSG00000030760)	B3gnt6 (ENSMUSG00000074004)	Omp (ENSMUSG00000074006)	Capn5 (ENSMUSG00000035547)	Myo7a (ENSMUSG00000030761)	Gdpd4 (ENSMUSG00000035582)	Pak1 (ENSMUSG00000030774)	Aqp11 (ENSMUSG00000042797) ##22	Clns1a (ENSMUSG00000025439)	Rsf1 (ENSMUSG00000035623)	Aamdc (ENSMUSG00000035642)	Ints4 (ENSMUSG00000025133)	Kctd14 (ENSMUSG00000051727)	Thrsp (ENSMUSG00000035686)	Ndufc2 (ENSMUSG00000030647)	Alg8 (ENSMUSG00000035704)	Kctd21 (ENSMUSG00000044952)	Usp35 (ENSMUSG00000035713)	Gab2 (ENSMUSG00000004508)	Nars2 (ENSMUSG00000018995)	Tenm4 (ENSMUSG00000048078)	Fam181b (ENSMUSG00000051515)	Prcp (ENSMUSG00000061119)
Mus_C	ANCESTRAL SPECIES	13	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00900000143755	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
spretus	MODERN SPECIES	16	Dgat2 (MGP_SPRETEiJ_G0031133)	Uvrag (MGP_SPRETEiJ_G0031132)	Wnt11 (MGP_SPRETEiJ_G0031131)	MGP_SPRETEiJ_G0031130	Emsy (MGP_SPRETEiJ_G0031129)	Lrrc32 (MGP_SPRETEiJ_G0031128)	Gucy2d (MGP_SPRETEiJ_G0031127)	Tsku (MGP_SPRETEiJ_G0031126)	Acer3 (MGP_SPRETEiJ_G0031125)	B3gnt6 (MGP_SPRETEiJ_G0031124)	Omp (MGP_SPRETEiJ_G0031123)	Capn5 (MGP_SPRETEiJ_G0031122)	Myo7a (MGP_SPRETEiJ_G0031121)	Gdpd4 (MGP_SPRETEiJ_G0031120)	Pak1 (MGP_SPRETEiJ_G0031119)	Aqp11 (MGP_SPRETEiJ_G0031118) ##22	Clns1a (MGP_SPRETEiJ_G0031117)	Rsf1 (MGP_SPRETEiJ_G0031116)	Aamdc (MGP_SPRETEiJ_G0031115)	Ints4 (MGP_SPRETEiJ_G0031114)	MGP_SPRETEiJ_G0031113	Thrsp (MGP_SPRETEiJ_G0031112)	Ndufc2 (MGP_SPRETEiJ_G0031111)	Alg8 (MGP_SPRETEiJ_G0031110)	Kctd21 (MGP_SPRETEiJ_G0031109)	Usp35 (MGP_SPRETEiJ_G0031108)	Gab2 (MGP_SPRETEiJ_G0031107)	Nars2 (MGP_SPRETEiJ_G0031106)	Tenm4 (MGP_SPRETEiJ_G0031105)	Prcp (MGP_SPRETEiJ_G0031104)	Ddias (MGP_SPRETEiJ_G0031103)
Steppe mouse	MODERN SPECIES	3349	Wnt11 (ENSMSIG00000027102)	Thap12 (ENSMSIG00000027087)	Emsy (ENSMSIG00000026804)	ENSMSIG00000026793	Lrrc32 (ENSMSIG00000026734)	Gucy2d (ENSMSIG00000026666)	ENSMSIG00000026660	Tsku (ENSMSIG00000026651)	Acer3 (ENSMSIG00000026641)	B3gnt6 (ENSMSIG00000026629)	Capn5 (ENSMSIG00000026611)	Myo7a (ENSMSIG00000026065)	ENSMSIG00000026060	ENSMSIG00000025967	Pak1 (ENSMSIG00000025929)	Aqp11 (ENSMSIG00000025922) ##22	Clns1a (ENSMSIG00000025912)	ENSMSIG00000025904	ENSMSIG00000025898	Rsf1 (ENSMSIG00000025856)	Aamdc (ENSMSIG00000025743)	Ints4 (ENSMSIG00000025677)	Kctd14 (ENSMSIG00000025623)
Ryukyu mouse	MODERN SPECIES	16	MGP_CAROLIEiJ_G0030023	Uvrag (MGP_CAROLIEiJ_G0030022)	Wnt11 (MGP_CAROLIEiJ_G0030021)	Thap12 (MGP_CAROLIEiJ_G0030020)	Emsy (MGP_CAROLIEiJ_G0030019)	Lrrc32 (MGP_CAROLIEiJ_G0030018)	Gucy2d (MGP_CAROLIEiJ_G0030017)	Tsku (MGP_CAROLIEiJ_G0030016)	Acer3 (MGP_CAROLIEiJ_G0030015)	B3gnt6 (MGP_CAROLIEiJ_G0030014)	Omp (MGP_CAROLIEiJ_G0030013)	Capn5 (MGP_CAROLIEiJ_G0030012)	Myo7a (MGP_CAROLIEiJ_G0030011)	Gdpd4 (MGP_CAROLIEiJ_G0030010)	Pak1 (MGP_CAROLIEiJ_G0030009)	Aqp11 (MGP_CAROLIEiJ_G0030008) ##22	Clns1a (MGP_CAROLIEiJ_G0030007)	Rsf1 (MGP_CAROLIEiJ_G0030006)	Aamdc (MGP_CAROLIEiJ_G0030005)	Ints4 (MGP_CAROLIEiJ_G0030004)	MGP_CAROLIEiJ_G0030003	Thrsp (MGP_CAROLIEiJ_G0030002)	Ndufc2 (MGP_CAROLIEiJ_G0030001)	Alg8 (MGP_CAROLIEiJ_G0030000)	Kctd21 (MGP_CAROLIEiJ_G0029999)	Usp35 (MGP_CAROLIEiJ_G0029998)	Gab2 (MGP_CAROLIEiJ_G0029997)	Nars2 (MGP_CAROLIEiJ_G0029996)	Tenm4 (MGP_CAROLIEiJ_G0029995)	Prcp (MGP_CAROLIEiJ_G0029994)	Ddias (MGP_CAROLIEiJ_G0029993)
Shrew mouse	MODERN SPECIES		Dgat2 (MGP_PahariEiJ_G0013244)	Uvrag (MGP_PahariEiJ_G0013243)	Wnt11 (MGP_PahariEiJ_G0013242)	Thap12 (MGP_PahariEiJ_G0013241)	Emsy (MGP_PahariEiJ_G0013240)	Lrrc32 (MGP_PahariEiJ_G0013239)	Gucy2d (MGP_PahariEiJ_G0013238)	Tsku (MGP_PahariEiJ_G0013237)	Acer3 (MGP_PahariEiJ_G0013236)	B3gnt6 (MGP_PahariEiJ_G0013235)	Omp (MGP_PahariEiJ_G0013234)	Capn5 (MGP_PahariEiJ_G0013233)	Myo7a (MGP_PahariEiJ_G0013232)	Gdpd4 (MGP_PahariEiJ_G0013231)	Pak1 (MGP_PahariEiJ_G0013230)	Aqp11 (MGP_PahariEiJ_G0013229) ##22	Clns1a (MGP_PahariEiJ_G0013228)	Rsf1 (MGP_PahariEiJ_G0013227)	Aamdc (MGP_PahariEiJ_G0013226)	Ints4 (MGP_PahariEiJ_G0013225)	MGP_PahariEiJ_G0013224	Thrsp (MGP_PahariEiJ_G0013223)	Ndufc2 (MGP_PahariEiJ_G0013222)	Alg8 (MGP_PahariEiJ_G0013221)	Kctd21 (MGP_PahariEiJ_G0013220)	Usp35 (MGP_PahariEiJ_G0013219)	Gab2 (MGP_PahariEiJ_G0013218)	Nars2 (MGP_PahariEiJ_G0013217)	MGP_PahariEiJ_G0013216	Tenm4 (MGP_PahariEiJ_G0013215)	Prcp (MGP_PahariEiJ_G0013214)
Rat	MODERN SPECIES		Wnt11 (ENSRNOG00000015982)	Thap12 (ENSRNOG00000053923)	Emsy (ENSRNOG00000015560)	Lrrc32 (ENSRNOG00000015310)	Gucy2e (ENSRNOG00000015058)	Tsku (ENSRNOG00000027784)	ENSRNOG00000065313	Acer3 (ENSRNOG00000036866)	B3gnt6 (ENSRNOG00000014471)	Omp (ENSRNOG00000068492)	Capn5 (ENSRNOG00000014251)	Myo7a (ENSRNOG00000013641)	ENSRNOG00000064082	Gdpd4 (ENSRNOG00000028470)	Pak1 (ENSRNOG00000029784)	Aqp11 (ENSRNOG00000013358) ##22	Clns1a (ENSRNOG00000012788)	Rsf1 (ENSRNOG00000024194)	Aamdc (ENSRNOG00000012584)	Ints4 (ENSRNOG00000012552)	Kctd14 (ENSRNOG00000012494)	Thrsp (ENSRNOG00000012404)	Ndufc2 (ENSRNOG00000012383)	Alg8 (ENSRNOG00000012292)	ENSRNOG00000071147	Kctd21 (ENSRNOG00000024793)	Usp35 (ENSRNOG00000024961)	Gab2 (ENSRNOG00000011882)	Nars2 (ENSRNOG00000011476)	Tenm4 (ENSRNOG00000011151)	Fam181b (ENSRNOG00000010763)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1254	Dgat2 (ENSNGAG00000012414)	Uvrag (ENSNGAG00000018199)	Wnt11 (ENSNGAG00000013425)	ENSNGAG00000013016	Emsy (ENSNGAG00000013674)	Lrrc32 (ENSNGAG00000010300)	Gucy2d (ENSNGAG00000020383)	Tsku (ENSNGAG00000015490)	Acer3 (ENSNGAG00000018623)	B3gnt6 (ENSNGAG00000014322)	Omp (ENSNGAG00000013730)	Capn5 (ENSNGAG00000015774)	Myo7a (ENSNGAG00000006076)	Gdpd4 (ENSNGAG00000008449)	Pak1 (ENSNGAG00000011050)	Aqp11 (ENSNGAG00000000912) ##22	ENSNGAG00000019313	Rsf1 (ENSNGAG00000019337)	Aamdc (ENSNGAG00000005085)	Ints4 (ENSNGAG00000010580)	Kctd14 (ENSNGAG00000014816)	Thrsp (ENSNGAG00000012385)	Ndufc2 (ENSNGAG00000011240)	Alg8 (ENSNGAG00000020942)	ENSNGAG00000019156	Kctd21 (ENSNGAG00000018996)	Usp35 (ENSNGAG00000012907)	Gab2 (ENSNGAG00000001090)	Nars2 (ENSNGAG00000000914)	Tenm4 (ENSNGAG00000018298)	ENSNGAG00000005012
Lesser Egyptian jerboa	MODERN SPECIES	59	Map6 (ENSJJAG00000014715)	Mogat2 (ENSJJAG00000023310)	Dgat2 (ENSJJAG00000019379)	Uvrag (ENSJJAG00000004695)	Wnt11 (ENSJJAG00000014979)	ENSJJAG00000013737	Emsy (ENSJJAG00000022026)	Lrrc32 (ENSJJAG00000000443)	ENSJJAG00000022648	Tsku (ENSJJAG00000012703)	Acer3 (ENSJJAG00000016119)	Capn5 (ENSJJAG00000021999)	Myo7a (ENSJJAG00000013078)	Gdpd4 (ENSJJAG00000018120)	ENSJJAG00000013179	Aqp11 (ENSJJAG00000023969) ##22	ENSJJAG00000006333	Rsf1 (ENSJJAG00000016956)	ENSJJAG00000011302	Ints4 (ENSJJAG00000018661)	Kctd14 (ENSJJAG00000022138)	Ndufc2 (ENSJJAG00000014939)	Alg8 (ENSJJAG00000018486)	Usp35 (ENSJJAG00000013300)	Gab2 (ENSJJAG00000020223)	ENSJJAG00000011765	Nars2 (ENSJJAG00000015019)	Tenm4 (ENSJJAG00000011108)	Fzd1 (ENSJJAG00000012179)	ENSJJAG00000022231	ENSJJAG00000007047
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000019448	ENSHGLG00000046732	ENSHGLG00000040669	ENSHGLG00000046387	ENSHGLG00000043666	ENSHGLG00000007972	ENSHGLG00000017959	ACER3 (ENSHGLG00000010087)	ENSHGLG00000037392	OMP (ENSHGLG00000046318)	CAPN5 (ENSHGLG00000002816)	MYO7A (ENSHGLG00000011345)	GDPD4 (ENSHGLG00000003760)	ENSHGLG00000019999	PAK1 (ENSHGLG00000046220)	AQP11 (ENSHGLG00000003550) ##22	ENSHGLG00000002326	RSF1 (ENSHGLG00000002695)	AAMDC (ENSHGLG00000003585)	ENSHGLG00000005234	ENSHGLG00000019142	ENSHGLG00000041450	ENSHGLG00000018875	THRSP (ENSHGLG00000013110)	NDUFC2 (ENSHGLG00000042879)	ALG8 (ENSHGLG00000019304)	KCTD21 (ENSHGLG00000032398)	USP35 (ENSHGLG00000019526)	GAB2 (ENSHGLG00000002641)	ENSHGLG00000003188	NARS2 (ENSHGLG00000003746)
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Guinea pig	MODERN SPECIES	40	MOGAT2 (ENSCPOG00000037142)	DGAT2 (ENSCPOG00000004409)	UVRAG (ENSCPOG00000010164)	WNT11 (ENSCPOG00000009182)	THAP12 (ENSCPOG00000013167)	EMSY (ENSCPOG00000010198)	LRRC32 (ENSCPOG00000004677)	ENSCPOG00000000712	TSKU (ENSCPOG00000036466)	ACER3 (ENSCPOG00000036907)	B3GNT6 (ENSCPOG00000040405)	CAPN5 (ENSCPOG00000004296)	MYO7A (ENSCPOG00000026904)	GDPD4 (ENSCPOG00000008503)	PAK1 (ENSCPOG00000000164)	AQP11 (ENSCPOG00000005258) ##22	CLNS1A (ENSCPOG00000005260)	RSF1 (ENSCPOG00000005261)	AAMDC (ENSCPOG00000004417)	INTS4 (ENSCPOG00000012466)	KCTD14 (ENSCPOG00000037873)	THRSP (ENSCPOG00000012393)	NDUFC2 (ENSCPOG00000012395)	ALG8 (ENSCPOG00000012398)	KCTD21 (ENSCPOG00000000382)	USP35 (ENSCPOG00000021879)	GAB2 (ENSCPOG00000012380)	NARS2 (ENSCPOG00000002639)	TENM4 (ENSCPOG00000002931)	PRCP (ENSCPOG00000030619)	DDIAS (ENSCPOG00000013049)
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00390000014932
Long-tailed chinchilla	MODERN SPECIES	121	DGAT2 (ENSCLAG00000015138)	UVRAG (ENSCLAG00000016075)	WNT11 (ENSCLAG00000014333)	THAP12 (ENSCLAG00000014847)	EMSY (ENSCLAG00000015699)	LRRC32 (ENSCLAG00000016535)	ENSCLAG00000014932	TSKU (ENSCLAG00000016143)	ENSCLAG00000015013	ACER3 (ENSCLAG00000014899)	B3GNT6 (ENSCLAG00000018076)	CAPN5 (ENSCLAG00000016170)	MYO7A (ENSCLAG00000013818)	GDPD4 (ENSCLAG00000016359)	PAK1 (ENSCLAG00000013320)	AQP11 (ENSCLAG00000016580) ##22	CLNS1A (ENSCLAG00000014638)	RSF1 (ENSCLAG00000014769)	AAMDC (ENSCLAG00000013898)	INTS4 (ENSCLAG00000015884)	NDUFC2 (ENSCLAG00000016641)	ALG8 (ENSCLAG00000014914)	ENSCLAG00000013655	KCTD21 (ENSCLAG00000015125)	USP35 (ENSCLAG00000015220)	GAB2 (ENSCLAG00000015175)	ENSCLAG00000013569	NARS2 (ENSCLAG00000012233)	TENM4 (ENSCLAG00000013721)	ENSCLAG00000015167	PRCP (ENSCLAG00000014395)
Degu	MODERN SPECIES	90	POLD3 (ENSODEG00000004735)	ENSODEG00000004965	ENSODEG00000019096	LIPT2 (ENSODEG00000004972)	KCNE3 (ENSODEG00000019113)	PGM2L1 (ENSODEG00000004995)	ACER3 (ENSODEG00000005051)	ENSODEG00000005063	ENSODEG00000005077	B3GNT6 (ENSODEG00000005108)	CAPN5 (ENSODEG00000005118)	MYO7A (ENSODEG00000004096)	GDPD4 (ENSODEG00000004342)	ENSODEG00000004389	PAK1 (ENSODEG00000004405)	AQP11 (ENSODEG00000004417) ##22	ENSODEG00000004427	RSF1 (ENSODEG00000004471)	AAMDC (ENSODEG00000004504)	INTS4 (ENSODEG00000004555)	ENSODEG00000004566	NDUFC2 (ENSODEG00000004580)	ALG8 (ENSODEG00000004601)	KCTD21 (ENSODEG00000004645)	USP35 (ENSODEG00000004671)	GAB2 (ENSODEG00000004754)	ENSODEG00000019084	NARS2 (ENSODEG00000004856)	TENM4 (ENSODEG00000004981)	ENSODEG00000019138	PRCP (ENSODEG00000003780)
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692
Marmotini	ANCESTRAL SPECIES	28	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.ab	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692
Marmotini_b	ANCESTRAL SPECIES	13	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.ab.a	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692
Squirrel	DUPLICATION
Squirrel	MODERN SPECIES	98	DGAT2 (ENSSTOG00000012018)	UVRAG (ENSSTOG00000016316)	WNT11 (ENSSTOG00000029064)	EMSY (ENSSTOG00000001193)	ENSSTOG00000027244	LRRC32 (ENSSTOG00000007128)	ENSSTOG00000023620	TSKU (ENSSTOG00000021957)	ACER3 (ENSSTOG00000002656)	B3GNT6 (ENSSTOG00000027714)	CAPN5 (ENSSTOG00000022877)	MYO7A (ENSSTOG00000002703)	GDPD4 (ENSSTOG00000002750)	ENSSTOG00000034844	PAK1 (ENSSTOG00000012786)	ENSSTOG00000004006 ##22	ENSSTOG00000027980	ENSSTOG00000009982	RSF1 (ENSSTOG00000004021)	AAMDC (ENSSTOG00000012329)	INTS4 (ENSSTOG00000023096)	KCTD14 (ENSSTOG00000031614)	THRSP (ENSSTOG00000023796)	NDUFC2 (ENSSTOG00000008104)	ALG8 (ENSSTOG00000008108)	KCTD21 (ENSSTOG00000022775)	USP35 (ENSSTOG00000019692)	GAB2 (ENSSTOG00000003173)	NARS2 (ENSSTOG00000019758)	TENM4 (ENSSTOG00000020637)	ENSSTOG00000032215
Squirrel	MODERN SPECIES	321																ENSSTOG00000028170 ##22	ZNF182 (ENSSTOG00000020030)	ENSSTOG00000006249	ENSSTOG00000034288	ENSSTOG00000015375	SLC38A5 (ENSSTOG00000001034)	FTSJ1 (ENSSTOG00000027717)	PORCN (ENSSTOG00000001047)	EBP (ENSSTOG00000001055)	TBC1D25 (ENSSTOG00000026006)	ENSSTOG00000027493	WDR13 (ENSSTOG00000014866)	WAS (ENSSTOG00000028043)	SUV39H1 (ENSSTOG00000015328)	GLOD5 (ENSSTOG00000014150)	GATA1 (ENSSTOG00000026993)
Arctic ground squirrel	MODERN SPECIES	48	WNT11 (ENSUPAG00010013326)	THAP12 (ENSUPAG00010013320)	ENSUPAG00010013311	GVQW3 (ENSUPAG00010013303)	EMSY (ENSUPAG00010013019)	ENSUPAG00010013002	LRRC32 (ENSUPAG00010012993)	ENSUPAG00010012917	TSKU (ENSUPAG00010012903)	B3GNT6 (ENSUPAG00010012889)	ACER3 (ENSUPAG00010012835)	CAPN5 (ENSUPAG00010012806)	MYO7A (ENSUPAG00010012134)	GDPD4 (ENSUPAG00010012115)	PAK1 (ENSUPAG00010012099)	AQP11 (ENSUPAG00010012087) ##22	ENSUPAG00010012077	RSF1 (ENSUPAG00010012048)	AAMDC (ENSUPAG00010012036)	INTS4 (ENSUPAG00010012011)	KCTD14 (ENSUPAG00010012000)	THRSP (ENSUPAG00010011995)	NDUFC2 (ENSUPAG00010011983)	ALG8 (ENSUPAG00010011952)	KCTD21 (ENSUPAG00010011947)	USP35 (ENSUPAG00010011912)	GAB2 (ENSUPAG00010011896)	NARS2 (ENSUPAG00010011853)	TENM4 (ENSUPAG00010011689)	FAM181B (ENSUPAG00010011665)	ENSUPAG00010011658
Alpin marmot	MODERN SPECIES	3	DGAT2 (ENSMMMG00000009694)	UVRAG (ENSMMMG00000009669)	WNT11 (ENSMMMG00000009631)	GVQW3 (ENSMMMG00000009582)	EMSY (ENSMMMG00000009455)	LRRC32 (ENSMMMG00000009408)	ENSMMMG00000009326	TSKU (ENSMMMG00000009316)	ACER3 (ENSMMMG00000009260)	B3GNT6 (ENSMMMG00000009247)	CAPN5 (ENSMMMG00000009202)	MYO7A (ENSMMMG00000008595)	GDPD4 (ENSMMMG00000008571)	ENSMMMG00000008545	PAK1 (ENSMMMG00000007056)	AQP11 (ENSMMMG00000007031) ##22	CLNS1A (ENSMMMG00000007023)	RSF1 (ENSMMMG00000006970)	ENSMMMG00000006961	INTS4 (ENSMMMG00000006934)	KCTD14 (ENSMMMG00000006927)	THRSP (ENSMMMG00000006924)	NDUFC2 (ENSMMMG00000006915)	ALG8 (ENSMMMG00000006888)	KCTD21 (ENSMMMG00000006872)	ENSMMMG00000006859	GAB2 (ENSMMMG00000006851)	ENSMMMG00000006848	NARS2 (ENSMMMG00000006830)	TENM4 (ENSMMMG00000006609)	ENSMMMG00000006557
Eurasian red squirrel	MODERN SPECIES	2	WNT11 (ENSSVLG00005022863)	THAP12 (ENSSVLG00005022917)	GVQW3 (ENSSVLG00005022970)	EMSY (ENSSVLG00005023093)	LRRC32 (ENSSVLG00005023371)	ENSSVLG00005023498	ENSSVLG00005023846	TSKU (ENSSVLG00005023871)	ACER3 (ENSSVLG00005023904)	B3GNT6 (ENSSVLG00005012209)	CAPN5 (ENSSVLG00005012247)	MYO7A (ENSSVLG00005012423)	GDPD4 (ENSSVLG00005013184)	ENSSVLG00005013294	PAK1 (ENSSVLG00005013431)	AQP11 (ENSSVLG00005013502) ##22	CLNS1A (ENSSVLG00005013729)	RSF1 (ENSSVLG00005013858)	AAMDC (ENSSVLG00005013937)	INTS4 (ENSSVLG00005014058)	ENSSVLG00005014481	ENSSVLG00005014498	THRSP (ENSSVLG00005014533)	NDUFC2 (ENSSVLG00005014553)	ALG8 (ENSSVLG00005014631)	KCTD21 (ENSSVLG00005014693)	USP35 (ENSSVLG00005014736)	GAB2 (ENSSVLG00005014816)	NARS2 (ENSSVLG00005014874)	ENSSVLG00005015001	TENM4 (ENSSVLG00005015124)
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692	ENSGT00940000158099
Pika	DUPLICATION
Pika	MODERN SPECIES	3715																ENSOPRG00000010526 ##22
Pika	MODERN SPECIES	6036																ENSOPRG00000006182 ##22
Rabbit	MODERN SPECIES		ENSOCUG00000035359	EMSY (ENSOCUG00000017880)	LRRC32 (ENSOCUG00000015394)	TSKU (ENSOCUG00000021411)	ACER3 (ENSOCUG00000021559)	B3GNT6 (ENSOCUG00000013809)	CAPN5 (ENSOCUG00000025830)	MYO7A (ENSOCUG00000023355)	ENSOCUG00000029270	ENSOCUG00000030870	ENSOCUG00000007181	PAK1 (ENSOCUG00000010538)	ENSOCUG00000009905	CLNS1A (ENSOCUG00000024393)	ENSOCUG00000020951	AQP11 (ENSOCUG00000003238) ##22	RSF1 (ENSOCUG00000011923)	AAMDC (ENSOCUG00000025658)	INTS4 (ENSOCUG00000010638)	KCTD14 (ENSOCUG00000005742)	THRSP (ENSOCUG00000000957)	ALG8 (ENSOCUG00000011266)	KCTD21 (ENSOCUG00000027266)	ENSOCUG00000005752	USP35 (ENSOCUG00000021262)	GAB2 (ENSOCUG00000017463)	NARS2 (ENSOCUG00000017469)	TENM4 (ENSOCUG00000004686)	ENSOCUG00000021220	ENSOCUG00000035434	PRCP (ENSOCUG00000000526)
Primates	ANCESTRAL SPECIES		ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Mouse lemur	MODERN SPECIES	27	MAP6 (ENSMICG00000015256)	MOGAT2 (ENSMICG00000015272)	DGAT2 (ENSMICG00000015277)	UVRAG (ENSMICG00000015281)	WNT11 (ENSMICG00000015306)	THAP12 (ENSMICG00000006139)	EMSY (ENSMICG00000006143)	LRRC32 (ENSMICG00000026468)	ACER3 (ENSMICG00000013908)	CAPN5 (ENSMICG00000013928)	MYO7A (ENSMICG00000013944)	GDPD4 (ENSMICG00000046391)	PAK1 (ENSMICG00000015365)	ENSMICG00000046772	ENSMICG00000037612	AQP11 (ENSMICG00000043193) ##22	CLNS1A (ENSMICG00000047894)	RSF1 (ENSMICG00000014613)	ENSMICG00000027095	CCDC90B (ENSMICG00000038111)	ANKRD42 (ENSMICG00000009004)	PCF11 (ENSMICG00000008986)	RAB30 (ENSMICG00000012002)	DDIAS (ENSMICG00000033865)	PRCP (ENSMICG00000011983)	TENM4 (ENSMICG00000015118)	NARS2 (ENSMICG00000015093)	GAB2 (ENSMICG00000015054)	USP35 (ENSMICG00000038576)	KCTD21 (ENSMICG00000046215)	ALG8 (ENSMICG00000015000)
Lemuriformes_a	ANCESTRAL SPECIES	50	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.a	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Greater bamboo lemur	MODERN SPECIES	970								ENSPSMG00000012716	ACER3 (ENSPSMG00000012733)	B3GNT6 (ENSPSMG00000012738)	CAPN5 (ENSPSMG00000012780)	MYO7A (ENSPSMG00000012875)	GDPD4 (ENSPSMG00000012887)	ENSPSMG00000012895	PAK1 (ENSPSMG00000013092)	AQP11 (ENSPSMG00000013331) ##22	CLNS1A (ENSPSMG00000013404)	RSF1 (ENSPSMG00000013477)	AAMDC (ENSPSMG00000013511)	INTS4 (ENSPSMG00000013557)	ENSPSMG00000013577	KCTD14 (ENSPSMG00000013579)	THRSP (ENSPSMG00000013585)	NDUFC2 (ENSPSMG00000013598)	ALG8 (ENSPSMG00000013689)	KCTD21 (ENSPSMG00000013751)	ENSPSMG00000013755	USP35 (ENSPSMG00000013781)	GAB2 (ENSPSMG00000013794)	NARS2 (ENSPSMG00000013898)	TENM4 (ENSPSMG00000014042)
Coquerels sifaka	MODERN SPECIES	485															ENSPCOG00000024013	AQP11 (ENSPCOG00000022144) ##22	CLNS1A (ENSPCOG00000016901)	ENSPCOG00000022998	RSF1 (ENSPCOG00000023361)	AAMDC (ENSPCOG00000020838)	INTS4 (ENSPCOG00000021031)	ENSPCOG00000026697	KCTD14 (ENSPCOG00000024125)	NDUFC2 (ENSPCOG00000015100)	ALG8 (ENSPCOG00000002085)	ENSPCOG00000022629	KCTD21 (ENSPCOG00000007716)	USP35 (ENSPCOG00000019534)	GAB2 (ENSPCOG00000022417)	NARS2 (ENSPCOG00000025785)	ENSPCOG00000016755
Bushbaby	MODERN SPECIES	116	DGAT2 (ENSOGAG00000000330)	UVRAG (ENSOGAG00000025371)	WNT11 (ENSOGAG00000001568)	ENSOGAG00000001569	GVQW3 (ENSOGAG00000027877)	EMSY (ENSOGAG00000011434)	LRRC32 (ENSOGAG00000010967)	ENSOGAG00000029463	TSKU (ENSOGAG00000016850)	ACER3 (ENSOGAG00000016854)	B3GNT6 (ENSOGAG00000027236)	CAPN5 (ENSOGAG00000016859)	MYO7A (ENSOGAG00000016862)	GDPD4 (ENSOGAG00000016874)	PAK1 (ENSOGAG00000008289)	AQP11 (ENSOGAG00000009169) ##22	CLNS1A (ENSOGAG00000009170)	RSF1 (ENSOGAG00000002473)	AAMDC (ENSOGAG00000008615)	INTS4 (ENSOGAG00000008618)	KCTD14 (ENSOGAG00000004626)	THRSP (ENSOGAG00000000005)	ENSOGAG00000005017	ALG8 (ENSOGAG00000030703)	KCTD21 (ENSOGAG00000005206)	USP35 (ENSOGAG00000013098)	GAB2 (ENSOGAG00000013101)	NARS2 (ENSOGAG00000011914)	ENSOGAG00000031293	TENM4 (ENSOGAG00000011916)	ENSOGAG00000032633
Haplorrhini	ANCESTRAL SPECIES		ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Simiiformes	ANCESTRAL SPECIES		ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00530000063516.a.a.c.b.y.a	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01090000260123.a	ENSGT00940000162817	ENSGT00940000163821.a
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.n	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01090000260123.a	ENSGT00940000162817	ENSGT00940000163821.a
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.n	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00390000011376.e.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00440000033232.d	ENSGT00390000009554.o	ENSGT00910000147490	ENSGT00390000009554.p	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.n	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00390000011376.e.b
Gorilla	MODERN SPECIES	2	DGAT2 (ENSGGOG00000002910)	UVRAG (ENSGGOG00000002911)	WNT11 (ENSGGOG00000015024)	THAP12 (ENSGGOG00000006152)	GVQW3 (ENSGGOG00000027994)	EMSY (ENSGGOG00000012926)	LRRC32 (ENSGGOG00000001727)	TSKU (ENSGGOG00000008670)	ACER3 (ENSGGOG00000003818)	B3GNT6 (ENSGGOG00000000016)	CAPN5 (ENSGGOG00000008071)	MYO7A (ENSGGOG00000008082)	ENSGGOG00000008102	ENSGGOG00000043330	PAK1 (ENSGGOG00000003150)	AQP11 (ENSGGOG00000011985) ##22	CLNS1A (ENSGGOG00000003091)	RSF1 (ENSGGOG00000001833)	ENSGGOG00000023151	ENSGGOG00000013088	ENSGGOG00000001515	ENSGGOG00000043528	KCTD14 (ENSGGOG00000013554)	NDUFC2 (ENSGGOG00000041901)	THRSP (ENSGGOG00000003652)	ALG8 (ENSGGOG00000011611)	KCTD21 (ENSGGOG00000010076)	ENSGGOG00000037208	USP35 (ENSGGOG00000010079)	GAB2 (ENSGGOG00000010086)	ENSGGOG00000026279
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00440000033232.d	ENSGT00390000009554.o	ENSGT00910000147490	ENSGT00390000009554.p	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.n	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00390000011376.e.b
Pan	ANCESTRAL SPECIES	1	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00440000033232.d	ENSGT00390000009554.o	ENSGT00910000147490	ENSGT00390000009554.p	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.n	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00390000011376.e.b
Chimpanzee	MODERN SPECIES	2	UVRAG (ENSPTRG00000004088)	WNT11 (ENSPTRG00000004090)	THAP12 (ENSPTRG00000004091)	ENSPTRG00000028470	ENSPTRG00000049644	EMSY (ENSPTRG00000004093)	LRRC32 (ENSPTRG00000004094)	TSKU (ENSPTRG00000028468)	ACER3 (ENSPTRG00000004096)	B3GNT6 (ENSPTRG00000023606)	CAPN5 (ENSPTRG00000049993)	MYO7A (ENSPTRG00000004098)	GDPD4 (ENSPTRG00000004100)	ENSPTRG00000048327	PAK1 (ENSPTRG00000004101)	AQP11 (ENSPTRG00000004103) ##22	CLNS1A (ENSPTRG00000048842)	RSF1 (ENSPTRG00000004105)	AAMDC (ENSPTRG00000004106)	INTS4 (ENSPTRG00000004108)	KCTD14 (ENSPTRG00000004109)	NDUFC2 (ENSPTRG00000047123)	THRSP (ENSPTRG00000004110)	ALG8 (ENSPTRG00000004112)	KCTD21 (ENSPTRG00000044559)	ENSPTRG00000046421	USP35 (ENSPTRG00000051443)	GAB2 (ENSPTRG00000004115)	NARS2 (ENSPTRG00000004117)	TENM4 (ENSPTRG00000004118)	ENSPTRG00000045487
Bonobo	MODERN SPECIES	2	WNT11 (ENSPPAG00000010959)	ENSPPAG00000030327	ENSPPAG00000038460	ENSPPAG00000028053	THAP12 (ENSPPAG00000005479)	ENSPPAG00000027471	LRRC32 (ENSPPAG00000028327)	TSKU (ENSPPAG00000025259)	ACER3 (ENSPPAG00000015516)	B3GNT6 (ENSPPAG00000004892)	CAPN5 (ENSPPAG00000034162)	MYO7A (ENSPPAG00000035116)	GDPD4 (ENSPPAG00000033740)	ENSPPAG00000033073	PAK1 (ENSPPAG00000042768)	AQP11 (ENSPPAG00000030812) ##22	CLNS1A (ENSPPAG00000035940)	RSF1 (ENSPPAG00000020888)	ENSPPAG00000043844	ENSPPAG00000022805	ENSPPAG00000026625	ENSPPAG00000035381	KCTD14 (ENSPPAG00000042258)	NDUFC2 (ENSPPAG00000039205)	THRSP (ENSPPAG00000023087)	ALG8 (ENSPPAG00000029627)	KCTD21 (ENSPPAG00000000521)	ENSPPAG00000002837	USP35 (ENSPPAG00000038381)	GAB2 (ENSPPAG00000029980)	NARS2 (ENSPPAG00000028317)
Human	MODERN SPECIES	2	UVRAG (ENSG00000198382)	WNT11 (ENSG00000085741)	THAP12 (ENSG00000137492)	GVQW3 (ENSG00000179240)	EMSY (ENSG00000158636)	LRRC32 (ENSG00000137507)	TSKU (ENSG00000182704)	ACER3 (ENSG00000078124)	B3GNT6 (ENSG00000198488)	CAPN5 (ENSG00000149260)	OMP (ENSG00000254550)	MYO7A (ENSG00000137474)	GDPD4 (ENSG00000178795)	PAK1 (ENSG00000149269)	CLNS1A (ENSG00000074201)	AQP11 (ENSG00000178301) ##22	RSF1 (ENSG00000048649)	AAMDC (ENSG00000087884)	INTS4 (ENSG00000149262)	KCTD14 (ENSG00000151364)	NDUFC2-KCTD14 (ENSG00000259112)	THRSP (ENSG00000151365)	NDUFC2 (ENSG00000151366)	ALG8 (ENSG00000159063)	KCTD21 (ENSG00000188997)	USP35 (ENSG00000118369)	GAB2 (ENSG00000033327)	NARS2 (ENSG00000137513)	TENM4 (ENSG00000149256)	FAM181B (ENSG00000182103)	PRCP (ENSG00000137509)
Orangutan	MODERN SPECIES	2	WNT11 (ENSPPYG00000003696)	ENSPPYG00000040892	THAP12 (ENSPPYG00000003697)	ENSPPYG00000003698	EMSY (ENSPPYG00000003699)	LRRC32 (ENSPPYG00000003700)	TSKU (ENSPPYG00000003702)	ACER3 (ENSPPYG00000003703)	B3GNT6 (ENSPPYG00000003704)	CAPN5 (ENSPPYG00000003705)	MYO7A (ENSPPYG00000003706)	ENSPPYG00000003707	ENSPPYG00000035320	PAK1 (ENSPPYG00000003708)	ENSPPYG00000003709	AQP11 (ENSPPYG00000003711) ##22	CLNS1A (ENSPPYG00000003712)	RSF1 (ENSPPYG00000003713)	ENSPPYG00000003714	INTS4 (ENSPPYG00000003715)	KCTD14 (ENSPPYG00000003716)	THRSP (ENSPPYG00000003717)	NDUFC2 (ENSPPYG00000036421)	ALG8 (ENSPPYG00000003719)	KCTD21 (ENSPPYG00000003720)	ENSPPYG00000003721	USP35 (ENSPPYG00000003722)	GAB2 (ENSPPYG00000003723)	NARS2 (ENSPPYG00000003725)	TENM4 (ENSPPYG00000003726)	FAM181B (ENSPPYG00000003728)
Gibbon	MODERN SPECIES	5	WNT11 (ENSNLEG00000016841)	ENSNLEG00000032732	ENSNLEG00000033823	ENSNLEG00000028651	EMSY (ENSNLEG00000016812)	LRRC32 (ENSNLEG00000016810)	TSKU (ENSNLEG00000033845)	ACER3 (ENSNLEG00000034984)	B3GNT6 (ENSNLEG00000016789)	OMP (ENSNLEG00000016787)	CAPN5 (ENSNLEG00000016775)	MYO7A (ENSNLEG00000016747)	GDPD4 (ENSNLEG00000016736)	ENSNLEG00000030724	PAK1 (ENSNLEG00000016711)	AQP11 (ENSNLEG00000016709) ##22	CLNS1A (ENSNLEG00000016699)	RSF1 (ENSNLEG00000016681)	ENSNLEG00000033096	INTS4 (ENSNLEG00000026995)	KCTD14 (ENSNLEG00000026663)	THRSP (ENSNLEG00000036237)	ENSNLEG00000032308	ALG8 (ENSNLEG00000027080)	ENSNLEG00000030722	KCTD21 (ENSNLEG00000030708)	USP35 (ENSNLEG00000028871)	GAB2 (ENSNLEG00000016667)	ENSNLEG00000030860	NARS2 (ENSNLEG00000016643)	TENM4 (ENSNLEG00000016615)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00530000063516.a.a.c.b.y.a	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00530000063516.a.a.c.b.y.a	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Vervet Monkey	MODERN SPECIES		MAP6 (ENSCSAG00000003908)	MOGAT2 (ENSCSAG00000003906)	DGAT2 (ENSCSAG00000003904)	UVRAG (ENSCSAG00000003902)	WNT11 (ENSCSAG00000003899)	THAP12 (ENSCSAG00000003894)	EMSY (ENSCSAG00000003885)	LRRC32 (ENSCSAG00000003880)	TSKU (ENSCSAG00000000618)	ACER3 (ENSCSAG00000003878)	B3GNT6 (ENSCSAG00000000617)	CAPN5 (ENSCSAG00000003875)	MYO7A (ENSCSAG00000003861)	GDPD4 (ENSCSAG00000003828)	PAK1 (ENSCSAG00000003823)	AQP11 (ENSCSAG00000003819) ##22	CLNS1A (ENSCSAG00000003818)	RSF1 (ENSCSAG00000003816)	AAMDC (ENSCSAG00000003812)	INTS4 (ENSCSAG00000003811)	KCTD14 (ENSCSAG00000003806)	THRSP (ENSCSAG00000000616)	NDUFC2 (ENSCSAG00000003804)	ALG8 (ENSCSAG00000003802)	KCTD21 (ENSCSAG00000000615)	USP35 (ENSCSAG00000003800)	GAB2 (ENSCSAG00000003797)	NARS2 (ENSCSAG00000003793)	TENM4 (ENSCSAG00000003773)	FAM181B (ENSCSAG00000000614)	PRCP (ENSCSAG00000003715)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234566.e.b.b.a
Macaca	ANCESTRAL SPECIES	2	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234566.e.b.b.a
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263539.b.b.b.b.a.a.b.b.b.b.a
Rhesus	MODERN SPECIES	5	UVRAG (ENSMMUG00000000187)	WNT11 (ENSMMUG00000051614)	THAP12 (ENSMMUG00000048604)	GVQW3 (ENSMMUG00000059619)	EMSY (ENSMMUG00000022401)	LRRC32 (ENSMMUG00000022403)	TSKU (ENSMMUG00000058889)	ACER3 (ENSMMUG00000018168)	ENSMMUG00000050497	B3GNT6 (ENSMMUG00000050318)	CAPN5 (ENSMMUG00000018174)	OMP (ENSMMUG00000055575)	MYO7A (ENSMMUG00000018178)	GDPD4 (ENSMMUG00000018188)	PAK1 (ENSMMUG00000001387)	AQP11 (ENSMMUG00000018944) ##22	CLNS1A (ENSMMUG00000018945)	RSF1 (ENSMMUG00000017355)	AAMDC (ENSMMUG00000010119)	INTS4 (ENSMMUG00000010120)	ENSMMUG00000063047	KCTD14 (ENSMMUG00000017471)	NDUFC2 (ENSMMUG00000050672)	THRSP (ENSMMUG00000017470)	ALG8 (ENSMMUG00000017472)	KCTD21 (ENSMMUG00000017473)	ENSMMUG00000051695	USP35 (ENSMMUG00000017476)	GAB2 (ENSMMUG00000017477)	NARS2 (ENSMMUG00000004649)	TENM4 (ENSMMUG00000042218)
Crab-eating macaque	MODERN SPECIES	5	UVRAG (ENSMFAG00000001657)	WNT11 (ENSMFAG00000043196)	THAP12 (ENSMFAG00000033682)	ENSMFAG00000042788	ENSMFAG00000052205	EMSY (ENSMFAG00000041695)	LRRC32 (ENSMFAG00000039295)	ENSMFAG00000049800	TSKU (ENSMFAG00000024120)	ACER3 (ENSMFAG00000041221)	ENSMFAG00000054763	CAPN5 (ENSMFAG00000043060)	OMP (ENSMFAG00000049511)	MYO7A (ENSMFAG00000044666)	GDPD4 (ENSMFAG00000003264)	AQP11 (ENSMFAG00000001663) ##22	CLNS1A (ENSMFAG00000043186)	RSF1 (ENSMFAG00000001930)	AAMDC (ENSMFAG00000034422)	INTS4 (ENSMFAG00000020209)	KCTD14 (ENSMFAG00000030889)	NDUFC2 (ENSMFAG00000030802)	THRSP (ENSMFAG00000060688)	ALG8 (ENSMFAG00000002110)	KCTD21 (ENSMFAG00000060342)	ENSMFAG00000023980	USP35 (ENSMFAG00000001255)	GAB2 (ENSMFAG00000003506)	NARS2 (ENSMFAG00000033477)	ENSMFAG00000058364	ENSMFAG00000058725
Pig-tailed macaque	MODERN SPECIES	423	UVRAG (ENSMNEG00000036116)	WNT11 (ENSMNEG00000042384)	ENSMNEG00000014529	GVQW3 (ENSMNEG00000035110)	ENSMNEG00000025096	EMSY (ENSMNEG00000041511)	LRRC32 (ENSMNEG00000041843)	TSKU (ENSMNEG00000013194)	ACER3 (ENSMNEG00000030819)	B3GNT6 (ENSMNEG00000035934)	CAPN5 (ENSMNEG00000037879)	MYO7A (ENSMNEG00000030597)	GDPD4 (ENSMNEG00000038159)	ENSMNEG00000028157	PAK1 (ENSMNEG00000044840)	AQP11 (ENSMNEG00000044078) ##22	CLNS1A (ENSMNEG00000036050)	RSF1 (ENSMNEG00000043815)	AAMDC (ENSMNEG00000029653)	INTS4 (ENSMNEG00000044252)	KCTD14 (ENSMNEG00000042231)	NDUFC2 (ENSMNEG00000027120)	ALG8 (ENSMNEG00000033047)	KCTD21 (ENSMNEG00000009764)	USP35 (ENSMNEG00000040956)	GAB2 (ENSMNEG00000040872)	NARS2 (ENSMNEG00000036144)	ENSMNEG00000033890	TENM4 (ENSMNEG00000042610)	FAM181B (ENSMNEG00000003392)	PRCP (ENSMNEG00000029822)
Cercopithecinae_b	ANCESTRAL SPECIES	32	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234566.e.b.b.a
Olive baboon	MODERN SPECIES	3	WNT11 (ENSPANG00000014353)	ENSPANG00000003101	ENSPANG00000007883	EMSY (ENSPANG00000007638)	LRRC32 (ENSPANG00000015382)	ENSPANG00000049669	TSKU (ENSPANG00000018404)	ENSPANG00000046867	ACER3 (ENSPANG00000024908)	B3GNT6 (ENSPANG00000006331)	ENSPANG00000050104	CAPN5 (ENSPANG00000010115)	MYO7A (ENSPANG00000008342)	GDPD4 (ENSPANG00000011944)	PAK1 (ENSPANG00000018291)	AQP11 (ENSPANG00000014352) ##22	CLNS1A (ENSPANG00000019127)	RSF1 (ENSPANG00000017793)	AAMDC (ENSPANG00000016126)	INTS4 (ENSPANG00000016287)	KCTD14 (ENSPANG00000032429)	THRSP (ENSPANG00000039953)	NDUFC2 (ENSPANG00000004040)	ALG8 (ENSPANG00000014351)	ENSPANG00000012861	KCTD21 (ENSPANG00000043382)	USP35 (ENSPANG00000006477)	GAB2 (ENSPANG00000014350)	NARS2 (ENSPANG00000025887)	ENSPANG00000011885	ENSPANG00000044910
Cercopithecinae_d	ANCESTRAL SPECIES	27	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234566.e.b.b.a	ENSGT00390000011376.e.b
Drill	MODERN SPECIES	1018										ACER3 (ENSMLEG00000027480)	CAPN5 (ENSMLEG00000043868)	MYO7A (ENSMLEG00000000314)	GDPD4 (ENSMLEG00000044208)	ENSMLEG00000039171	PAK1 (ENSMLEG00000033376)	AQP11 (ENSMLEG00000028777) ##22	CLNS1A (ENSMLEG00000040581)	RSF1 (ENSMLEG00000038363)	AAMDC (ENSMLEG00000040894)	INTS4 (ENSMLEG00000040512)	KCTD14 (ENSMLEG00000030473)	NDUFC2 (ENSMLEG00000039299)	ALG8 (ENSMLEG00000025271)	ENSMLEG00000026673	KCTD21 (ENSMLEG00000019386)	USP35 (ENSMLEG00000038344)	GAB2 (ENSMLEG00000038890)	NARS2 (ENSMLEG00000029559)	ENSMLEG00000037365	TENM4 (ENSMLEG00000034676)	ENSMLEG00000040137
Sooty mangabey	MODERN SPECIES	545	UVRAG (ENSCATG00000039451)	WNT11 (ENSCATG00000035881)	THAP12 (ENSCATG00000024587)	GVQW3 (ENSCATG00000035253)	ENSCATG00000006180	EMSY (ENSCATG00000033145)	LRRC32 (ENSCATG00000039757)	TSKU (ENSCATG00000018628)	ACER3 (ENSCATG00000024996)	B3GNT6 (ENSCATG00000031669)	CAPN5 (ENSCATG00000044156)	MYO7A (ENSCATG00000037969)	GDPD4 (ENSCATG00000038800)	ENSCATG00000032730	PAK1 (ENSCATG00000032259)	AQP11 (ENSCATG00000012294) ##22	CLNS1A (ENSCATG00000043634)	RSF1 (ENSCATG00000041020)	AAMDC (ENSCATG00000032345)	INTS4 (ENSCATG00000039621)	KCTD14 (ENSCATG00000007749)	NDUFC2 (ENSCATG00000039655)	ALG8 (ENSCATG00000044265)	KCTD21 (ENSCATG00000007922)	USP35 (ENSCATG00000034027)	GAB2 (ENSCATG00000034189)	NARS2 (ENSCATG00000031854)	ENSCATG00000044075	TENM4 (ENSCATG00000045269)	ENSCATG00000045182	FAM181B (ENSCATG00000005538)
Rhinopithecus	ANCESTRAL SPECIES	63	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00390000001136	ENSGT00390000007753.a	ENSGT00940000153986.b.a	ENSGT00940000156318	ENSGT00940000156359	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT01100000263497.A	ENSGT00940000156562	ENSGT00530000063405.a	ENSGT00940000153498.A	ENSGT00940000158149	ENSGT00390000011249	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.q.a	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000013354.d.a.b.a.a.a
Golden snub-nosed monkey	MODERN SPECIES	1247													GDPD4 (ENSRROG00000023992)	ENSRROG00000036425	PAK1 (ENSRROG00000045159)	AQP11 (ENSRROG00000044105) ##22	ENSRROG00000044618	RSF1 (ENSRROG00000041658)	AAMDC (ENSRROG00000038727)	INTS4 (ENSRROG00000033522)	KCTD14 (ENSRROG00000030587)	ENSRROG00000003031	THRSP (ENSRROG00000011313)	NDUFC2 (ENSRROG00000028423)	ALG8 (ENSRROG00000037352)	KCTD21 (ENSRROG00000015553)	USP35 (ENSRROG00000015796)	GAB2 (ENSRROG00000037838)	ENSRROG00000029807	NARS2 (ENSRROG00000044898)	ENSRROG00000033701
Black snub-nosed monkey	MODERN SPECIES	1148						TSKU (ENSRBIG00000019981)	ACER3 (ENSRBIG00000037201)	ENSRBIG00000018440	ENSRBIG00000036893	B3GNT6 (ENSRBIG00000039681)	CAPN5 (ENSRBIG00000041321)	MYO7A (ENSRBIG00000036813)	GDPD4 (ENSRBIG00000037924)	ENSRBIG00000036379	PAK1 (ENSRBIG00000034335)	AQP11 (ENSRBIG00000013902) ##22	ENSRBIG00000035450	RSF1 (ENSRBIG00000043374)	AAMDC (ENSRBIG00000044663)	INTS4 (ENSRBIG00000042236)	KCTD14 (ENSRBIG00000042721)	THRSP (ENSRBIG00000024986)	NDUFC2 (ENSRBIG00000009625)	ALG8 (ENSRBIG00000035473)	KCTD21 (ENSRBIG00000025743)	USP35 (ENSRBIG00000040631)	GAB2 (ENSRBIG00000031806)	NARS2 (ENSRBIG00000040493)	ENSRBIG00000043707
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00940000155959.n	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000008403.ab	ENSGT00390000002365.x.d.a
Cebidae	ANCESTRAL SPECIES		ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00940000155959.n	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000008403.ab	ENSGT00390000002365.x.d.a
Cebidae_a	ANCESTRAL SPECIES	73																ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00940000155959.n	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT00840000129953.c	ENSGT01030000234618.D	ENSGT00390000008403.ab
Capuchin	MODERN SPECIES	693																AQP11 (ENSCCAG00000028904) ##22	CLNS1A (ENSCCAG00000028678)	RSF1 (ENSCCAG00000029286)	AAMDC (ENSCCAG00000030156)	ENSCCAG00000028445	ENSCCAG00000021670	INTS4 (ENSCCAG00000027747)	KCTD14 (ENSCCAG00000030700)	ENSCCAG00000028542	NDUFC2 (ENSCCAG00000029958)	ALG8 (ENSCCAG00000020475)	KCTD21 (ENSCCAG00000003376)
Bolivian squirrel monkey	MODERN SPECIES	111																AQP11 (ENSSBOG00000025232) ##22	ENSSBOG00000002716	RSF1 (ENSSBOG00000034331)	ENSSBOG00000023955	AAMDC (ENSSBOG00000028864)	INTS4 (ENSSBOG00000029194)	ENSSBOG00000003211	KCTD14 (ENSSBOG00000022366)	THRSP (ENSSBOG00000034227)	NDUFC2 (ENSSBOG00000022978)	ALG8 (ENSSBOG00000023607)	KCTD21 (ENSSBOG00000036354)	USP35 (ENSSBOG00000026711)	GAB2 (ENSSBOG00000020898)	ENSSBOG00000017060	ENSSBOG00000022679
Marmoset	MODERN SPECIES	2	THAP12 (ENSCJAG00000012300)	GVQW3 (ENSCJAG00000015286)	EMSY (ENSCJAG00000015204)	LRRC32 (ENSCJAG00000041496)	TSKU (ENSCJAG00000015198)	ACER3 (ENSCJAG00000015179)	B3GNT6 (ENSCJAG00000048141)	CAPN5 (ENSCJAG00000015126)	ENSCJAG00000081839	MYO7A (ENSCJAG00000015009)	ENSCJAG00000077361	GDPD4 (ENSCJAG00000015002)	PAK1 (ENSCJAG00000014954)	ENSCJAG00000070241	ENSCJAG00000073608	AQP11 (ENSCJAG00000014939) ##22	CLNS1A (ENSCJAG00000014927)	RSF1 (ENSCJAG00000014899)	ENSCJAG00000014890	ENSCJAG00000077936	INTS4 (ENSCJAG00000014825)	KCTD14 (ENSCJAG00000014824)	ENSCJAG00000021760	THRSP (ENSCJAG00000022085)	ENSCJAG00000014820	NDUFC2 (ENSCJAG00000066176)	ALG8 (ENSCJAG00000014792)	KCTD21 (ENSCJAG00000043935)	USP35 (ENSCJAG00000014781)	ENSCJAG00000069693	GAB2 (ENSCJAG00000014753)
Mas night monkey	MODERN SPECIES	575	DGAT2 (ENSANAG00000033159)	UVRAG (ENSANAG00000037389)	WNT11 (ENSANAG00000023221)	THAP12 (ENSANAG00000034553)	GVQW3 (ENSANAG00000033324)	EMSY (ENSANAG00000037605)	LRRC32 (ENSANAG00000036098)	TSKU (ENSANAG00000028760)	ACER3 (ENSANAG00000031758)	CAPN5 (ENSANAG00000032657)	MYO7A (ENSANAG00000023144)	GDPD4 (ENSANAG00000030211)	PAK1 (ENSANAG00000019562)	ENSANAG00000029802	ENSANAG00000031650	AQP11 (ENSANAG00000032006) ##22	ENSANAG00000010001	RSF1 (ENSANAG00000024984)	AAMDC (ENSANAG00000031884)	INTS4 (ENSANAG00000005253)	ENSANAG00000037311	KCTD14 (ENSANAG00000032585)	NDUFC2 (ENSANAG00000032706)	ENSANAG00000035549	ALG8 (ENSANAG00000028151)	KCTD21 (ENSANAG00000008887)	USP35 (ENSANAG00000023780)	GAB2 (ENSANAG00000033147)	NARS2 (ENSANAG00000022061)	ENSANAG00000023487	ENSANAG00000027040
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Eulipotyphla	ANCESTRAL SPECIES	813																ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411
Common shrew	MODERN SPECIES	5648																AQP11 (ENSSARG00000009449) ##22	CLNS1A (ENSSARG00000009460)	RSF1 (ENSSARG00000009471)
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Suina	ANCESTRAL SPECIES	5	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128.n	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Pig	MODERN SPECIES	17	EMSY (ENSSSCG00000014868)	LRRC32 (ENSSSCG00000014869)	ENSSSCG00000055915	TSKU (ENSSSCG00000014871)	ENSSSCG00000014872	ACER3 (ENSSSCG00000032723)	ENSSSCG00000053515	B3GNT6 (ENSSSCG00000014874)	CAPN5 (ENSSSCG00000014875)	MYO7A (ENSSSCG00000014876)	ENSSSCG00000014877	ENSSSCG00000053774	ENSSSCG00000058608	ENSSSCG00000055558	PAK1 (ENSSSCG00000014878)	AQP11 (ENSSSCG00000014880) ##22	CLNS1A (ENSSSCG00000014881)	RSF1 (ENSSSCG00000014882)	ENSSSCG00000037251	ENSSSCG00000014884	ENSSSCG00000031979	THRSP (ENSSSCG00000033822)	NDUFC2 (ENSSSCG00000039494)	ALG8 (ENSSSCG00000014887)	KCTD21 (ENSSSCG00000033506)	ENSSSCG00000042960	USP35 (ENSSSCG00000014892)	GAB2 (ENSSSCG00000014891)	ENSSSCG00000048333	NARS2 (ENSSSCG00000014893)	TENM4 (ENSSSCG00000014894)
Chacoan peccary	MODERN SPECIES	32	UVRAG (ENSCWAG00000001705)	WNT11 (ENSCWAG00000001687)	THAP12 (ENSCWAG00000001677)	GVQW3 (ENSCWAG00000001671)	EMSY (ENSCWAG00000001547)	LRRC32 (ENSCWAG00000001490)	ENSCWAG00000001431	TSKU (ENSCWAG00000001407)	ACER3 (ENSCWAG00000001370)	B3GNT6 (ENSCWAG00000001354)	CAPN5 (ENSCWAG00000001339)	MYO7A (ENSCWAG00000001099)	ENSCWAG00000001004	ENSCWAG00000000976	PAK1 (ENSCWAG00000000943)	AQP11 (ENSCWAG00000000925) ##22	CLNS1A (ENSCWAG00000000875)	RSF1 (ENSCWAG00000000803)	AAMDC (ENSCWAG00000000780)	INTS4 (ENSCWAG00000000693)	KCTD14 (ENSCWAG00000000654)	THRSP (ENSCWAG00000000643)	NDUFC2 (ENSCWAG00000000628)	ALG8 (ENSCWAG00000000606)	ENSCWAG00000000598	KCTD21 (ENSCWAG00000000591)	USP35 (ENSCWAG00000000554)	GAB2 (ENSCWAG00000000513)	NARS2 (ENSCWAG00000000469)	ENSCWAG00000000452	TENM4 (ENSCWAG00000000422)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Cetacea	ANCESTRAL SPECIES	4	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692	ENSGT00940000158099
Odontoceti	ANCESTRAL SPECIES	4	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692	ENSGT00940000158099
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958.i.a	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000010352.q	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692	ENSGT00940000158099
Dolphin	MODERN SPECIES	2143																AQP11 (ENSTTRG00000007045) ##22	CLNS1A (ENSTTRG00000007062)	RSF1 (ENSTTRG00000007090)	AAMDC (ENSTTRG00000007111)	INTS4 (ENSTTRG00000007121)	KCTD14 (ENSTTRG00000007151)	NDUFC2 (ENSTTRG00000007154)	ALG8 (ENSTTRG00000007158)
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958.i.a	ENSGT00390000010128	ENSGT00940000168561	ENSGT00950000183087.A.b.b.j	ENSGT00940000160762	ENSGT00390000010352.q	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01010000228968	ENSGT01030000234566.e.b.b.a
Vaquita	MODERN SPECIES	19	DGAT2 (ENSPSNG00000005697)	LSM4 (ENSPSNG00000005672)	UVRAG (ENSPSNG00000005649)	WNT11 (ENSPSNG00000005604)	ENSPSNG00000005572	GVQW3 (ENSPSNG00000005560)	EMSY (ENSPSNG00000005336)	LRRC32 (ENSPSNG00000005215)	ENSPSNG00000005198	ENSPSNG00000005176	TSKU (ENSPSNG00000005155)	ACER3 (ENSPSNG00000005102)	CAPN5 (ENSPSNG00000005069)	MYO7A (ENSPSNG00000004811)	PAK1 (ENSPSNG00000004688)	AQP11 (ENSPSNG00000004655) ##22	CLNS1A (ENSPSNG00000004596)	RSF1 (ENSPSNG00000004527)	ENSPSNG00000004492	ENSPSNG00000004460	ENSPSNG00000004436	INTS4 (ENSPSNG00000004296)	KCTD14 (ENSPSNG00000004214)	ENSPSNG00000004194	ALG8 (ENSPSNG00000004160)	KCTD21 (ENSPSNG00000004126)	USP35 (ENSPSNG00000004108)	GAB2 (ENSPSNG00000004098)	NARS2 (ENSPSNG00000004074)	ENSPSNG00000004054	TENM4 (ENSPSNG00000004019)
Monodontidae	ANCESTRAL SPECIES	2	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958.i.a	ENSGT00390000010128	ENSGT00390000003860.cb.b	ENSGT00950000183087.A.b.b.j	ENSGT00940000160762	ENSGT00390000010352.q	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01010000228968	ENSGT01030000234566.e.b.b.a
Narwhal	MODERN SPECIES	314	MOGAT2 (ENSMMNG00015019582)	DGAT2 (ENSMMNG00015019561)	LSM4 (ENSMMNG00015019548)	UVRAG (ENSMMNG00015019516)	WNT11 (ENSMMNG00015019462)	ENSMMNG00015019441	GVQW3 (ENSMMNG00015019432)	EMSY (ENSMMNG00015019155)	LRRC32 (ENSMMNG00015019035)	ENSMMNG00015019014	TSKU (ENSMMNG00015018998)	ACER3 (ENSMMNG00015018948)	CAPN5 (ENSMMNG00015018893)	MYO7A (ENSMMNG00015018569)	PAK1 (ENSMMNG00015018474)	AQP11 (ENSMMNG00015018453) ##22	CLNS1A (ENSMMNG00015018424)	RSF1 (ENSMMNG00015018385)	ENSMMNG00015018363	ENSMMNG00015018333	ENSMMNG00015018307	INTS4 (ENSMMNG00015018001)	KCTD14 (ENSMMNG00015017911)	ENSMMNG00015017877	ALG8 (ENSMMNG00015017839)	KCTD21 (ENSMMNG00015017806)	USP35 (ENSMMNG00015017738)	GAB2 (ENSMMNG00015017697)	NARS2 (ENSMMNG00015017636)	ENSMMNG00015017594	TENM4 (ENSMMNG00015017559)
Beluga whale	MODERN SPECIES	2	MOGAT2 (ENSDLEG00000003103)	DGAT2 (ENSDLEG00000003119)	LSM4 (ENSDLEG00000003159)	WNT11 (ENSDLEG00000003165)	THAP12 (ENSDLEG00000003173)	GVQW3 (ENSDLEG00000003193)	EMSY (ENSDLEG00000003214)	LRRC32 (ENSDLEG00000003305)	ENSDLEG00000003313	ENSDLEG00000003321	TSKU (ENSDLEG00000003327)	ACER3 (ENSDLEG00000003334)	CAPN5 (ENSDLEG00000003342)	MYO7A (ENSDLEG00000003449)	PAK1 (ENSDLEG00000004277)	AQP11 (ENSDLEG00000004294) ##22	CLNS1A (ENSDLEG00000004301)	RSF1 (ENSDLEG00000004307)	AAMDC (ENSDLEG00000004318)	INTS4 (ENSDLEG00000004326)	ENSDLEG00000004342	KCTD14 (ENSDLEG00000004354)	ENSDLEG00000004361	ALG8 (ENSDLEG00000004365)	KCTD21 (ENSDLEG00000004374)	USP35 (ENSDLEG00000004381)	GAB2 (ENSDLEG00000004384)	NARS2 (ENSDLEG00000004391)	TENM4 (ENSDLEG00000004417)	ENSDLEG00000004540	FAM181B (ENSDLEG00000004553)
Sperm whale	MODERN SPECIES	7	MOGAT2 (ENSPCTG00005012047)	DGAT2 (ENSPCTG00005011874)	ENSPCTG00005011854	UVRAG (ENSPCTG00005011757)	WNT11 (ENSPCTG00005011701)	ENSPCTG00005011685	GVQW3 (ENSPCTG00005011668)	EMSY (ENSPCTG00005011180)	LRRC32 (ENSPCTG00005011094)	TSKU (ENSPCTG00005011078)	ACER3 (ENSPCTG00005010914)	CAPN5 (ENSPCTG00005010782)	MYO7A (ENSPCTG00005009160)	GDPD4 (ENSPCTG00005008885)	PAK1 (ENSPCTG00005008855)	AQP11 (ENSPCTG00005012243) ##22	CLNS1A (ENSPCTG00005012102)	RSF1 (ENSPCTG00005012040)	ENSPCTG00005011994	ENSPCTG00005011852	ENSPCTG00005011813	INTS4 (ENSPCTG00005011313)	KCTD14 (ENSPCTG00005011283)	NDUFC2 (ENSPCTG00005011217)	ALG8 (ENSPCTG00005011136)	KCTD21 (ENSPCTG00005011096)	USP35 (ENSPCTG00005010965)	GAB2 (ENSPCTG00005010907)	NARS2 (ENSPCTG00005010794)	TENM4 (ENSPCTG00005010687)	FAM181B (ENSPCTG00005010654)
Blue whale	MODERN SPECIES	19	MOGAT2 (ENSBMSG00010006441)	DGAT2 (ENSBMSG00010006424)	UVRAG (ENSBMSG00010006403)	WNT11 (ENSBMSG00010006371)	THAP12 (ENSBMSG00010006359)	GVQW3 (ENSBMSG00010006350)	EMSY (ENSBMSG00010005898)	LRRC32 (ENSBMSG00010005727)	ENSBMSG00010005705	TSKU (ENSBMSG00010005685)	ACER3 (ENSBMSG00010005659)	CAPN5 (ENSBMSG00010005617)	MYO7A (ENSBMSG00010005524)	GDPD4 (ENSBMSG00010005481)	PAK1 (ENSBMSG00010005469)	AQP11 (ENSBMSG00010005455) ##22	CLNS1A (ENSBMSG00010005431)	RSF1 (ENSBMSG00010005407)	ENSBMSG00010005359	INTS4 (ENSBMSG00010005324)	KCTD14 (ENSBMSG00010005287)	NDUFC2 (ENSBMSG00010005272)	ALG8 (ENSBMSG00010005254)	KCTD21 (ENSBMSG00010005236)	USP35 (ENSBMSG00010005214)	GAB2 (ENSBMSG00010005186)	NARS2 (ENSBMSG00010005167)	TENM4 (ENSBMSG00010005114)	ENSBMSG00010005082	FAM181B (ENSBMSG00010005075)	ENSBMSG00010005070
Pecora	ANCESTRAL SPECIES	13	ENSGT00940000156825	ENSGT00940000154963	ENSGT00810000125439.A	ENSGT00950000182989.D.a.a.g.b	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00940000156251.f.e.a	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Yarkand deer	MODERN SPECIES	11	NELL1 (ENSCHYG00000010475)	ENSCHYG00000010427	ANO5 (ENSCHYG00000009862)	SLC17A6 (ENSCHYG00000009689)	FANCF (ENSCHYG00000009636)	GAS2 (ENSCHYG00000009479)	ENSCHYG00000009425	CCDC179 (ENSCHYG00000009380)	ENSCHYG00000009355	ENSCHYG00000009321	ENSCHYG00000009185	ENSCHYG00000009058	ENSCHYG00000008843	ENSCHYG00000004057	PAK1 (ENSCHYG00000004009)	AQP11 (ENSCHYG00000003991) ##22	CLNS1A (ENSCHYG00000003949)	RSF1 (ENSCHYG00000003899)	ENSCHYG00000003886	ENSCHYG00000003859	INTS4 (ENSCHYG00000003807)	KCTD14 (ENSCHYG00000003792)	THRSP (ENSCHYG00000003785)	NDUFC2 (ENSCHYG00000003780)	ALG8 (ENSCHYG00000003751)	ENSCHYG00000003733	KCTD21 (ENSCHYG00000003720)	USP35 (ENSCHYG00000003699)	GAB2 (ENSCHYG00000003673)	ENSCHYG00000003661	NARS2 (ENSCHYG00000003592)
Percora_a	ANCESTRAL SPECIES	16	ENSGT00940000156825	ENSGT00940000154963	ENSGT00810000125439.A	ENSGT00950000182989.D.a.a.g.b	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00940000156251.f.e.a	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Siberian musk deer	MODERN SPECIES	113												GDPD4 (ENSMMSG00000005765)	PAK1 (ENSMMSG00000005702)	ENSMMSG00000005665	ENSMMSG00000005636	AQP11 (ENSMMSG00000005614) ##22	ENSMMSG00000005371	RSF1 (ENSMMSG00000005280)	AAMDC (ENSMMSG00000005194)	INTS4 (ENSMMSG00000004977)	KCTD14 (ENSMMSG00000004944)	THRSP (ENSMMSG00000004930)	NDUFC2 (ENSMMSG00000004904)	ALG8 (ENSMMSG00000004825)	ENSMMSG00000004807	KCTD21 (ENSMMSG00000004784)	USP35 (ENSMMSG00000004718)	GAB2 (ENSMMSG00000004659)	NARS2 (ENSMMSG00000004571)	TENM4 (ENSMMSG00000004524)	ENSMMSG00000004494
Bovidae	ANCESTRAL SPECIES	16	ENSGT00940000154963	ENSGT00810000125439.A.qc.a	ENSGT00810000125439.A.rc	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00940000156251.f.e.a	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00740000117054
Caprinae	ANCESTRAL SPECIES	29	ENSGT00940000156825	ENSGT00940000154963	ENSGT00810000125439.A.qc.a	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00940000156251.f.e.a	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00740000117054
Goat	MODERN SPECIES	21	NELL1 (ENSCHIG00000022956)	ANO5 (ENSCHIG00000009295)	SLC17A6 (ENSCHIG00000018728)	FANCF (ENSCHIG00000007412)	GAS2 (ENSCHIG00000024172)	SVIP (ENSCHIG00000018647)	ENSCHIG00000012126	ENSCHIG00000026019	ENSCHIG00000018981	ENSCHIG00000011542	ENSCHIG00000012289	ENSCHIG00000012938	PAK1 (ENSCHIG00000003071)	ENSCHIG00000020809	ENSCHIG00000008822	AQP11 (ENSCHIG00000013621) ##22	CLNS1A (ENSCHIG00000022408)	ENSCHIG00000014742	RSF1 (ENSCHIG00000024983)	AAMDC (ENSCHIG00000016553)	INTS4 (ENSCHIG00000016677)	KCTD14 (ENSCHIG00000010510)	THRSP (ENSCHIG00000010391)	NDUFC2 (ENSCHIG00000024981)	ALG8 (ENSCHIG00000015388)	ENSCHIG00000012136	KCTD21 (ENSCHIG00000010283)	USP35 (ENSCHIG00000022000)	GAB2 (ENSCHIG00000017530)	NARS2 (ENSCHIG00000018475)	ENSCHIG00000017581
Rambouillet Sheep	MODERN SPECIES	13	ENSOARG00020025682	ENSOARG00020025676	ENSOARG00020025672	HTATIP2 (ENSOARG00020025666)	PRMT3 (ENSOARG00020025645)	SLC6A5 (ENSOARG00020025638)	NELL1 (ENSOARG00020025588)	ENSOARG00020025569	ENSOARG00020025562	LUZP2 (ENSOARG00020025537)	ENSOARG00020025509	ENSOARG00020025490	ENSOARG00020025417	PAK1 (ENSOARG00020025388)	ENSOARG00020025384	AQP11 (ENSOARG00020025375) ##22	CLNS1A (ENSOARG00020025356)	ENSOARG00020025348	RSF1 (ENSOARG00020025337)	AAMDC (ENSOARG00020025329)	INTS4 (ENSOARG00020025265)	KCTD14 (ENSOARG00020025241)	THRSP (ENSOARG00020025234)	NDUFC2 (ENSOARG00020025217)	ALG8 (ENSOARG00020025204)	ENSOARG00020025198	ENSOARG00020025186	KCTD21 (ENSOARG00020025178)	USP35 (ENSOARG00020025158)	ENSOARG00020025150	GAB2 (ENSOARG00020025127)
Bovinae	ANCESTRAL SPECIES	27	ENSGT00940000156825	ENSGT00940000154963	ENSGT00810000125439.A.qc.a	ENSGT00810000125439.A.rc	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00390000002918.a.a.j.c.a	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
American bison	MODERN SPECIES	3238											ENSBBBG00000007625	ENSBBBG00000018916	ENSBBBG00000018951	PAK1 (ENSBBBG00000018980)	ENSBBBG00000018987	AQP11 (ENSBBBG00000018990) ##22	CLNS1A (ENSBBBG00000019050)	ENSBBBG00000019059	RSF1 (ENSBBBG00000004893)	AAMDC (ENSBBBG00000004908)	ENSBBBG00000004915	INTS4 (ENSBBBG00000019159)	KCTD14 (ENSBBBG00000019169)	NDUFC2 (ENSBBBG00000019182)	ALG8 (ENSBBBG00000007272)	ENSBBBG00000004952	KCTD21 (ENSBBBG00000008170)	ENSBBBG00000019225	USP35 (ENSBBBG00000019234)	GAB2 (ENSBBBG00000004971)	NARS2 (ENSBBBG00000007100)
Bos	ANCESTRAL SPECIES	11	ENSGT00810000125439.A.qc.a	ENSGT00810000125439.A.rc	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755.e.a	ENSGT00940000155755.f	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00390000007015.q.b	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00390000002918.a.a.j.c.a.a.a	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00740000117054
Bos_a	ANCESTRAL SPECIES	66											ENSGT00390000007015.q.b	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00740000117054	ENSGT01030000234566.e.b.b.a
Wild yak	MODERN SPECIES	2189																AQP11 (ENSBMUG00000012404) ##22	CLNS1A (ENSBMUG00000012444)	RSF1 (ENSBMUG00000012481)	ENSBMUG00000012501	AAMDC (ENSBMUG00000012554)	INTS4 (ENSBMUG00000012608)	KCTD14 (ENSBMUG00000012629)	THRSP (ENSBMUG00000012634)	NDUFC2 (ENSBMUG00000012648)	ALG8 (ENSBMUG00000012690)
Domestic yak	MODERN SPECIES	21	OR10G6 (ENSBGRG00000024329)	OR10S1 (ENSBGRG00000024345)	ENSBGRG00000024364	ENSBGRG00000024380	OR8D4 (ENSBGRG00000017223)	ENSBGRG00000017237	ENSBGRG00000017300	ENSBGRG00000017317	ENSBGRG00000017480	ENSBGRG00000017635	ENSBGRG00000017741	ENSBGRG00000017769	ENSBGRG00000018068	PAK1 (ENSBGRG00000018531)	ENSBGRG00000018633	AQP11 (ENSBGRG00000018686) ##22	CLNS1A (ENSBGRG00000018759)	RSF1 (ENSBGRG00000019124)	ENSBGRG00000019411	AAMDC (ENSBGRG00000019457)	INTS4 (ENSBGRG00000019630)	KCTD14 (ENSBGRG00000020044)	THRSP (ENSBGRG00000020064)	NDUFC2 (ENSBGRG00000020103)	ALG8 (ENSBGRG00000020232)	KCTD21 (ENSBGRG00000020357)	USP35 (ENSBGRG00000020391)	ENSBGRG00000020442	GAB2 (ENSBGRG00000020464)	NARS2 (ENSBGRG00000020539)	ENSBGRG00000020752
Bos_b	ANCESTRAL SPECIES	10	ENSGT00810000125439.A.qc.a	ENSGT00810000125439.A.rc	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755.f	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00970000198347	ENSGT00390000013180	ENSGT00390000007015.q.b	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00390000002918.a.a.j.c.a.a.a	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00740000117054
Cow	MODERN SPECIES	21	PRMT3 (ENSBTAG00000013421)	SLC6A5 (ENSBTAG00000014300)	ENSBTAG00000048576	ENSBTAG00000050228	ANO5 (ENSBTAG00000019394)	SLC17A6 (ENSBTAG00000038347)	FANCF (ENSBTAG00000007230)	GAS2 (ENSBTAG00000021654)	ENSBTAG00000054222	ENSBTAG00000053211	LUZP2 (ENSBTAG00000001043)	ENSBTAG00000034536	ENSBTAG00000000886	PAK1 (ENSBTAG00000010191)	ENSBTAG00000009268	AQP11 (ENSBTAG00000019928) ##22	CLNS1A (ENSBTAG00000019930)	ENSBTAG00000051290	ENSBTAG00000049245	RSF1 (ENSBTAG00000020268)	AAMDC (ENSBTAG00000017298)	INTS4 (ENSBTAG00000010505)	KCTD14 (ENSBTAG00000011668)	THRSP (ENSBTAG00000011666)	NDUFC2 (ENSBTAG00000018188)	ALG8 (ENSBTAG00000018192)	ENSBTAG00000045601	KCTD21 (ENSBTAG00000054429)	ENSBTAG00000051637	USP35 (ENSBTAG00000012944)	GAB2 (ENSBTAG00000002922)
Hybrid Bos Indicus	MODERN SPECIES	21	SLC6A5 (ENSBIXG00005006663)	NELL1 (ENSBIXG00005021911)	ANO5 (ENSBIXG00005021754)	SLC17A6 (ENSBIXG00005021666)	FANCF (ENSBIXG00005021632)	GAS2 (ENSBIXG00005021605)	ENSBIXG00005000008	CCDC179 (ENSBIXG00005021565)	ENSBIXG00005006604	LUZP2 (ENSBIXG00005003622)	ENSBIXG00005021330	ENSBIXG00005021308	ENSBIXG00005021277	PAK1 (ENSBIXG00005021064)	ENSBIXG00005021010	AQP11 (ENSBIXG00005020997) ##22	CLNS1A (ENSBIXG00005020933)	RSF1 (ENSBIXG00005003521)	ENSBIXG00005020733	ENSBIXG00005007728	AAMDC (ENSBIXG00005020691)	INTS4 (ENSBIXG00005020611)	KCTD14 (ENSBIXG00005020393)	ENSBIXG00005020379	THRSP (ENSBIXG00005020366)	ALG8 (ENSBIXG00005020344)	ENSBIXG00005007674	KCTD21 (ENSBIXG00005007835)	ENSBIXG00005003394	USP35 (ENSBIXG00005020250)	ENSBIXG00005020247
Camelidae	ANCESTRAL SPECIES	32	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.f	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000158099	ENSGT00390000014932
Alpaca	MODERN SPECIES	2232														ENSVPAG00000010388	PAK1 (ENSVPAG00000010389)	AQP11 (ENSVPAG00000010390) ##22	CLNS1A (ENSVPAG00000010391)	RSF1 (ENSVPAG00000010392)	AAMDC (ENSVPAG00000010394)	INTS4 (ENSVPAG00000010395)
Arabian camel	MODERN SPECIES	1	UVRAG (ENSCDRG00005003820)	WNT11 (ENSCDRG00005003887)	THAP12 (ENSCDRG00005003929)	GVQW3 (ENSCDRG00005003950)	EMSY (ENSCDRG00005004068)	LRRC32 (ENSCDRG00005004741)	ENSCDRG00005004762	ENSCDRG00005004792	TSKU (ENSCDRG00005004808)	ACER3 (ENSCDRG00005004836)	B3GNT6 (ENSCDRG00005004982)	CAPN5 (ENSCDRG00005005010)	MYO7A (ENSCDRG00005005065)	GDPD4 (ENSCDRG00005005146)	PAK1 (ENSCDRG00005005198)	AQP11 (ENSCDRG00005005237) ##22	CLNS1A (ENSCDRG00005005266)	RSF1 (ENSCDRG00005005378)	AAMDC (ENSCDRG00005005416)	INTS4 (ENSCDRG00005005479)	KCTD14 (ENSCDRG00005005593)	THRSP (ENSCDRG00005005606)	NDUFC2 (ENSCDRG00005005626)	ALG8 (ENSCDRG00005005652)	KCTD21 (ENSCDRG00005005709)	USP35 (ENSCDRG00005005740)	GAB2 (ENSCDRG00005005876)	NARS2 (ENSCDRG00005005899)	TENM4 (ENSCDRG00005005968)	PRCP (ENSCDRG00005000165)	DDIAS (ENSCDRG00005000219)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Carnivora	ANCESTRAL SPECIES	21	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Caniformia	ANCESTRAL SPECIES	17	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.c.b	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Canidae	ANCESTRAL SPECIES	17	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00550000074832.ab	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.c.a	ENSGT00390000010063.c.b	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128.o	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00550000074832.ab	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.c.a	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128.o	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00390000003682.v	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Dog	MODERN SPECIES	13	THAP12 (ENSCAFG00845010711)	GVQW3 (ENSCAFG00845010675)	LRRC32 (ENSCAFG00845010636)	ENSCAFG00845010608	ENSCAFG00845010588	ENSCAFG00845010554	TSKU (ENSCAFG00845010425)	ENSCAFG00845010388	ACER3 (ENSCAFG00845010185)	B3GNT6 (ENSCAFG00845010131)	CAPN5 (ENSCAFG00845010073)	MYO7A (ENSCAFG00845009933)	GDPD4 (ENSCAFG00845009487)	ENSCAFG00845009261	PAK1 (ENSCAFG00845009162)	AQP11 (ENSCAFG00845009094) ##22	CLNS1A (ENSCAFG00845009011)	AAMDC (ENSCAFG00845008924)	ENSCAFG00845008643	THRSP (ENSCAFG00845008564)	NDUFC2 (ENSCAFG00845008528)	ENSCAFG00845008468	ALG8 (ENSCAFG00845008295)	ENSCAFG00845008222	KCTD21 (ENSCAFG00845008208)	USP35 (ENSCAFG00845008133)	GAB2 (ENSCAFG00845007967)	NARS2 (ENSCAFG00845007387)	TENM4 (ENSCAFG00845006537)	ENSCAFG00845006195	ENSCAFG00845012280
Dingo	MODERN SPECIES	245	THAP12 (ENSCAFG00020001916)	GVQW3 (ENSCAFG00020001914)	EMSY (ENSCAFG00020001634)	LRRC32 (ENSCAFG00020001532)	ENSCAFG00020001515	ENSCAFG00020001492	TSKU (ENSCAFG00020001488)	ENSCAFG00020001463	ACER3 (ENSCAFG00020001459)	B3GNT6 (ENSCAFG00020001446)	CAPN5 (ENSCAFG00020001423)	MYO7A (ENSCAFG00020001093)	GDPD4 (ENSCAFG00020001036)	PAK1 (ENSCAFG00020001022)	ENSCAFG00020001015	AQP11 (ENSCAFG00020001010) ##22	ENSCAFG00020000978	RSF1 (ENSCAFG00020000720)	AAMDC (ENSCAFG00020000697)	ENSCAFG00020000588	KCTD14 (ENSCAFG00020000578)	THRSP (ENSCAFG00020000573)	NDUFC2 (ENSCAFG00020000561)	ENSCAFG00020000537	ALG8 (ENSCAFG00020000527)	ENSCAFG00020000514	KCTD21 (ENSCAFG00020000509)	USP35 (ENSCAFG00020000434)	GAB2 (ENSCAFG00020000415)	NARS2 (ENSCAFG00020000396)	TENM4 (ENSCAFG00020000281)
Red fox	MODERN SPECIES	81	THAP12 (ENSVVUG00000024332)	GVQW3 (ENSVVUG00000024331)	EMSY (ENSVVUG00000024307)	ENSVVUG00000024300	LRRC32 (ENSVVUG00000024297)	ENSVVUG00000024295	ENSVVUG00000024288	TSKU (ENSVVUG00000024274)	ENSVVUG00000024265	ACER3 (ENSVVUG00000024261)	ENSVVUG00000024257	CAPN5 (ENSVVUG00000024255)	MYO7A (ENSVVUG00000023681)	GDPD4 (ENSVVUG00000023559)	PAK1 (ENSVVUG00000023555)	AQP11 (ENSVVUG00000023552) ##22	CLNS1A (ENSVVUG00000023537)	RSF1 (ENSVVUG00000023532)	AAMDC (ENSVVUG00000023530)	ENSVVUG00000022914	KCTD14 (ENSVVUG00000022877)	THRSP (ENSVVUG00000022874)	NDUFC2 (ENSVVUG00000022872)	ENSVVUG00000022871	ALG8 (ENSVVUG00000022867)	ENSVVUG00000022864	KCTD21 (ENSVVUG00000022861)	USP35 (ENSVVUG00000022858)	GAB2 (ENSVVUG00000022852)	NARS2 (ENSVVUG00000022842)	TENM4 (ENSVVUG00000017164)
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.c.b	ENSGT00530000064411	ENSGT00940000166485.a	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Mustelinae	ANCESTRAL SPECIES	25	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.h.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063.c.b	ENSGT00530000064411	ENSGT00940000166485.a	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
American mink	MODERN SPECIES	6	WNT11 (ENSNVIG00000000391)	ENSNVIG00000000416	GVQW3 (ENSNVIG00000000425)	EMSY (ENSNVIG00000000431)	LRRC32 (ENSNVIG00000000538)	ENSNVIG00000000546	ENSNVIG00000000562	ENSNVIG00000000591	TSKU (ENSNVIG00000000600)	ACER3 (ENSNVIG00000000606)	ENSNVIG00000000632	CAPN5 (ENSNVIG00000000641)	MYO7A (ENSNVIG00000000684)	ENSNVIG00000000803	PAK1 (ENSNVIG00000000824)	AQP11 (ENSNVIG00000000855) ##22	ENSNVIG00000000865	RSF1 (ENSNVIG00000000888)	ENSNVIG00000000909	ENSNVIG00000000917	INTS4 (ENSNVIG00000000934)	KCTD14 (ENSNVIG00000000969)	THRSP (ENSNVIG00000000973)	NDUFC2 (ENSNVIG00000000977)	ALG8 (ENSNVIG00000001004)	KCD21 (ENSNVIG00000001036)	ENSNVIG00000001038	USP35 (ENSNVIG00000001044)	GAB2 (ENSNVIG00000001084)	SYNM (ENSNVIG00000001138)	TENM4 (ENSNVIG00000001212)
Ferret	MODERN SPECIES	537														ENSMPUG00000015954	PAK1 (ENSMPUG00000015949)	AQP11 (ENSMPUG00000015947) ##22	CLNS1A (ENSMPUG00000015944)	RSF1 (ENSMPUG00000015940)	AAMDC (ENSMPUG00000015932)	INTS4 (ENSMPUG00000015931)
Ursidae	ANCESTRAL SPECIES	15	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00940000165195	ENSGT00530000064411	ENSGT00940000166485.a	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Ursus	ANCESTRAL SPECIES	36	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00940000165195	ENSGT00530000064411	ENSGT00940000166485.a	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
American black bear	MODERN SPECIES	7422																AQP11 (ENSUAMG00000001926) ##22	ENSUAMG00000001920	RSF1 (ENSUAMG00000001900)
Polar bear	MODERN SPECIES	302	SERPINH1 (ENSUMAG00000010838)	MOGAT2 (ENSUMAG00000010842)	DGAT2 (ENSUMAG00000010859)	UVRAG (ENSUMAG00000010891)	ENSUMAG00000010943	GVQW3 (ENSUMAG00000010946)	EMSY (ENSUMAG00000010950)	ENSUMAG00000010963	ENSUMAG00000010965	ENSUMAG00000010978	ACER3 (ENSUMAG00000010990)	CAPN5 (ENSUMAG00000011009)	MYO7A (ENSUMAG00000011108)	GDPD4 (ENSUMAG00000011316)	PAK1 (ENSUMAG00000011349)	AQP11 (ENSUMAG00000011361) ##22	ENSUMAG00000011366	RSF1 (ENSUMAG00000011375)	ENSUMAG00000011381	AAMDC (ENSUMAG00000011384)	INTS4 (ENSUMAG00000011388)	KCTD14 (ENSUMAG00000011398)	THRSP (ENSUMAG00000011404)	ENSUMAG00000011409	ENSUMAG00000011419	ENSUMAG00000011427	KCTD21 (ENSUMAG00000011431)	ENSUMAG00000011439	GAB2 (ENSUMAG00000011445)	NARS2 (ENSUMAG00000011459)	TENM4 (ENSUMAG00000011476)
Giant Panda	MODERN SPECIES	18	DGAT2 (ENSAMEG00000016958)	UVRAG (ENSAMEG00000016944)	WNT11 (ENSAMEG00000016932)	THAP12 (ENSAMEG00000016926)	GVQW3 (ENSAMEG00000020284)	EMSY (ENSAMEG00000016911)	LRRC32 (ENSAMEG00000016910)	ENSAMEG00000016872	TSKU (ENSAMEG00000020283)	ACER3 (ENSAMEG00000009111)	B3GNT6 (ENSAMEG00000018928)	CAPN5 (ENSAMEG00000009127)	MYO7A (ENSAMEG00000009185)	GDPD4 (ENSAMEG00000005563)	PAK1 (ENSAMEG00000005584)	AQP11 (ENSAMEG00000005651) ##22	ENSAMEG00000002097	ENSAMEG00000029619	RSF1 (ENSAMEG00000002111)	AAMDC (ENSAMEG00000002128)	INTS4 (ENSAMEG00000002133)	KCTD14 (ENSAMEG00000019889)	THRSP (ENSAMEG00000019892)	NDUFC2 (ENSAMEG00000025302)	ALG8 (ENSAMEG00000002183)	ENSAMEG00000029890	KCTD21 (ENSAMEG00000019900)	USP35 (ENSAMEG00000002210)	GAB2 (ENSAMEG00000028338)	TENM4 (ENSAMEG00000002255)	ENSAMEG00000025763
Felidae	ANCESTRAL SPECIES		ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01000000215318
Panthera	ANCESTRAL SPECIES	23	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01000000215318
Panthera_a	ANCESTRAL SPECIES	24	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01000000215318
lion	MODERN SPECIES	10	UVRAG (ENSPLOG00000005912)	WNT11 (ENSPLOG00000005866)	THAP12 (ENSPLOG00000005843)	GVQW3 (ENSPLOG00000005758)	EMSY (ENSPLOG00000005554)	LRRC32 (ENSPLOG00000005396)	ENSPLOG00000005376	ENSPLOG00000005358	ENSPLOG00000005339	TSKU (ENSPLOG00000005323)	ACER3 (ENSPLOG00000005289)	B3GNT6 (ENSPLOG00000005267)	CAPN5 (ENSPLOG00000005252)	MYO7A (ENSPLOG00000005121)	PAK1 (ENSPLOG00000004964)	AQP11 (ENSPLOG00000004938) ##22	CLNS1A (ENSPLOG00000004913)	RSF1 (ENSPLOG00000021573)	AAMDC (ENSPLOG00000021529)	INTS4 (ENSPLOG00000021499)	KCTD14 (ENSPLOG00000021478)	THRSP (ENSPLOG00000021468)	ENSPLOG00000021443	ALG8 (ENSPLOG00000021363)	ENSPLOG00000021312	ENSPLOG00000021291	USP35 (ENSPLOG00000021253)	GAB2 (ENSPLOG00000021206)	NARS2 (ENSPLOG00000021176)	TENM4 (ENSPLOG00000021056)	ENSPLOG00000020966
leopard	MODERN SPECIES	17	UVRAG (ENSPPRG00000007658)	WNT11 (ENSPPRG00000006331)	THAP12 (ENSPPRG00000005378)	GVQW3 (ENSPPRG00000018362)	EMSY (ENSPPRG00000004765)	LRRC32 (ENSPPRG00000014260)	ENSPPRG00000013613	ENSPPRG00000012568	TSKU (ENSPPRG00000017969)	ACER3 (ENSPPRG00000011781)	B3GNT6 (ENSPPRG00000017917)	CAPN5 (ENSPPRG00000009255)	MYO7A (ENSPPRG00000008347)	GDPD4 (ENSPPRG00000023602)	PAK1 (ENSPPRG00000017647)	AQP11 (ENSPPRG00000012766) ##22	CLNS1A (ENSPPRG00000012218)	RSF1 (ENSPPRG00000009730)	AAMDC (ENSPPRG00000008947)	INTS4 (ENSPPRG00000008445)	KCTD14 (ENSPPRG00000017268)	THRSP (ENSPPRG00000017258)	ENSPPRG00000007066	ALG8 (ENSPPRG00000005691)	KCTD21 (ENSPPRG00000017214)	ENSPPRG00000017162	USP35 (ENSPPRG00000004495)	GAB2 (ENSPPRG00000004004)	ENSPPRG00000003277	NARS2 (ENSPPRG00000001838)	TENM4 (ENSPPRG00000001206)
Tiger	MODERN SPECIES	123			ENSPTIG00000018040	WNT11 (ENSPTIG00000018045)	THAP12 (ENSPTIG00000018125)	GVQW3 (ENSPTIG00000009766)	EMSY (ENSPTIG00000018392)	LRRC32 (ENSPTIG00000019326)	ENSPTIG00000019438	TSKU (ENSPTIG00000009783)	ACER3 (ENSPTIG00000019527)	CAPN5 (ENSPTIG00000019765)	MYO7A (ENSPTIG00000000193)	GDPD4 (ENSPTIG00000005676)	PAK1 (ENSPTIG00000006531)	AQP11 (ENSPTIG00000007423) ##22	CLNS1A (ENSPTIG00000007611)	RSF1 (ENSPTIG00000007738)	AAMDC (ENSPTIG00000007970)	INTS4 (ENSPTIG00000008116)	KCTD14 (ENSPTIG00000009850)	THRSP (ENSPTIG00000009858)	ENSPTIG00000008425	ALG8 (ENSPTIG00000008488)	KCTD21 (ENSPTIG00000009866)	ENSPTIG00000009874	USP35 (ENSPTIG00000008738)	GAB2 (ENSPTIG00000008792)	NARS2 (ENSPTIG00000008940)	ENSPTIG00000009402	PRCP (ENSPTIG00000009483)
Cat	MODERN SPECIES	241	DGAT2 (ENSFCAG00000040215)	UVRAG (ENSFCAG00000022180)	WNT11 (ENSFCAG00000025418)	THAP12 (ENSFCAG00000006764)	GVQW3 (ENSFCAG00000025300)	EMSY (ENSFCAG00000012003)	LRRC32 (ENSFCAG00000012007)	ENSFCAG00000025549	TSKU (ENSFCAG00000041968)	ACER3 (ENSFCAG00000031003)	B3GNT6 (ENSFCAG00000014442)	CAPN5 (ENSFCAG00000014444)	MYO7A (ENSFCAG00000014446)	GDPD4 (ENSFCAG00000004157)	PAK1 (ENSFCAG00000004158)	AQP11 (ENSFCAG00000007447) ##22	CLNS1A (ENSFCAG00000026321)	RSF1 (ENSFCAG00000007449)	AAMDC (ENSFCAG00000007450)	INTS4 (ENSFCAG00000022698)	KCTD14 (ENSFCAG00000043035)	THRSP (ENSFCAG00000039734)	ENSFCAG00000029444	ALG8 (ENSFCAG00000025308)	ENSFCAG00000034388	KCTD21 (ENSFCAG00000042697)	USP35 (ENSFCAG00000007458)	GAB2 (ENSFCAG00000007459)	NARS2 (ENSFCAG00000007984)	TENM4 (ENSFCAG00000004322)	ENSFCAG00000024747
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Chiroptera	ANCESTRAL SPECIES	5	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Microbat	MODERN SPECIES	1023						WNT11 (ENSMLUG00000016319)	ENSMLUG00000000564	EMSY (ENSMLUG00000012303)	LRRC32 (ENSMLUG00000010094)	ENSMLUG00000001171	TSKU (ENSMLUG00000001174)	CAPN5 (ENSMLUG00000001183)	MYO7A (ENSMLUG00000016621)	GDPD4 (ENSMLUG00000016657)	PAK1 (ENSMLUG00000013311)	AQP11 (ENSMLUG00000009739) ##22	CLNS1A (ENSMLUG00000024623)	RSF1 (ENSMLUG00000005657)	ENSMLUG00000029974	AAMDC (ENSMLUG00000005674)	ENSMLUG00000025569	INTS4 (ENSMLUG00000005683)	KCTD14 (ENSMLUG00000014611)	THRSP (ENSMLUG00000014613)	ENSMLUG00000014617	ALG8 (ENSMLUG00000014622)	KCTD21 (ENSMLUG00000014632)	USP35 (ENSMLUG00000015951)	GAB2 (ENSMLUG00000015964)	NARS2 (ENSMLUG00000030064)	TENM4 (ENSMLUG00000011352)
Greater horseshoe bat	MODERN SPECIES	2	DGAT2 (ENSRFEG00010018775)	UVRAG (ENSRFEG00010018929)	ENSRFEG00010019042	ENSRFEG00010019083	WNT11 (ENSRFEG00010019130)	THAP12 (ENSRFEG00010019170)	GVQW3 (ENSRFEG00010019199)	EMSY (ENSRFEG00010019268)	LRRC32 (ENSRFEG00010019506)	TSKU (ENSRFEG00010019575)	ACER3 (ENSRFEG00010019610)	CAPN5 (ENSRFEG00010019733)	MYO7A (ENSRFEG00010019800)	GDPD4 (ENSRFEG00010020561)	PAK1 (ENSRFEG00010020635)	AQP11 (ENSRFEG00010020682) ##22	ENSRFEG00010020718	RSF1 (ENSRFEG00010020771)	AAMDC (ENSRFEG00010020818)	INTS4 (ENSRFEG00010020849)	KCTD14 (ENSRFEG00010020932)	THRSP (ENSRFEG00010020945)	NDUFC2 (ENSRFEG00010020959)	ALG8 (ENSRFEG00010020987)	ENSRFEG00010021023	ENSRFEG00010021031	USP35 (ENSRFEG00010021047)	GAB2 (ENSRFEG00010021071)	NARS2 (ENSRFEG00010021106)	ENSRFEG00010021143	TENM4 (ENSRFEG00010021157)
Megabat	MODERN SPECIES	2532																AQP11 (ENSPVAG00000013246) ##22	CLNS1A (ENSPVAG00000013247)	RSF1 (ENSPVAG00000013248)	AAMDC (ENSPVAG00000013250)	INTS4 (ENSPVAG00000013251)	KCTD14 (ENSPVAG00000013253)	THRSP (ENSPVAG00000013256)	NDUFC2 (ENSPVAG00000013258)	ALG8 (ENSPVAG00000013259)	USP35 (ENSPVAG00000013261)	GAB2 (ENSPVAG00000013264)	NARS2 (ENSPVAG00000013265)
Equus	ANCESTRAL SPECIES	15	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00390000005673	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Horse	MODERN SPECIES	28	WNT11 (ENSECAG00000022188)	THAP12 (ENSECAG00000021982)	GVQW3 (ENSECAG00000046273)	EMSY (ENSECAG00000020064)	LRRC32 (ENSECAG00000019895)	ENSECAG00000038312	TSKU (ENSECAG00000005924)	ACER3 (ENSECAG00000026842)	B3GNT6 (ENSECAG00000019463)	OMP (ENSECAG00000057103)	CAPN5 (ENSECAG00000015125)	MYO7A (ENSECAG00000024143)	ENSECAG00000047740	GDPD4 (ENSECAG00000023157)	PAK1 (ENSECAG00000017840)	AQP11 (ENSECAG00000017607) ##22	CLNS1A (ENSECAG00000015043)	ENSECAG00000045122	RSF1 (ENSECAG00000010685)	ENSECAG00000050740	AAMDC (ENSECAG00000010625)	INTS4 (ENSECAG00000002281)	THRSP (ENSECAG00000055545)	NDUFC2 (ENSECAG00000039611)	ALG8 (ENSECAG00000022682)	KCTD21 (ENSECAG00000005835)	KCTD21 (ENSECAG00000038949)	USP35 (ENSECAG00000021733)	GAB2 (ENSECAG00000020164)	TENM4 (ENSECAG00000008038)	FAM181B (ENSECAG00000030706)
Donkey	MODERN SPECIES	12	UVRAG (ENSEASG00005014226)	WNT11 (ENSEASG00005014224)	THAP12 (ENSEASG00005014222)	GVQW3 (ENSEASG00005026325)	EMSY (ENSEASG00005014219)	LRRC32 (ENSEASG00005014217)	ENSEASG00005014216	TSKU (ENSEASG00005028507)	ENSEASG00005037031	ENSEASG00005014209	B3GNT6 (ENSEASG00005038371)	CAPN5 (ENSEASG00005014205)	MYO7A (ENSEASG00005013920)	ENSEASG00005013887	PAK1 (ENSEASG00005013886)	AQP11 (ENSEASG00005013884) ##22	CLNS1A (ENSEASG00005013883)	RSF1 (ENSEASG00005013881)	AAMDC (ENSEASG00005013879)	INTS4 (ENSEASG00005013878)	KCTD14 (ENSEASG00005026841)	THRSP (ENSEASG00005035411)	NDUFC2 (ENSEASG00005013875)	ALG8 (ENSEASG00005013874)	ENSEASG00005013872	KCTD21 (ENSEASG00005026196)	USP35 (ENSEASG00005013870)	GAB2 (ENSEASG00005013868)	NARS2 (ENSEASG00005013867)	TENM4 (ENSEASG00005012922)	ENSEASG00005033750
Atlantogenata	ANCESTRAL SPECIES	35	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000158099	ENSGT00390000014932
Afrotheria	ANCESTRAL SPECIES	41	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.d	ENSGT00530000063516.a.a.c.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000158099	ENSGT00390000014932
Afrotheria_a	ANCESTRAL SPECIES	120															ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000158099	ENSGT00390000014932
Elephant	MODERN SPECIES	486															PAK1 (ENSLAFG00000017795)	AQP11 (ENSLAFG00000003192) ##22	CLNS1A (ENSLAFG00000003193)	RSF1 (ENSLAFG00000003194)	AAMDC (ENSLAFG00000000518)	INTS4 (ENSLAFG00000017400)	KCTD14 (ENSLAFG00000017412)	THRSP (ENSLAFG00000022714)	NDUFC2 (ENSLAFG00000001271)	ALG8 (ENSLAFG00000018266)	KCTD21 (ENSLAFG00000030533)	USP35 (ENSLAFG00000015007)	GAB2 (ENSLAFG00000015015)	NARS2 (ENSLAFG00000008484)	TENM4 (ENSLAFG00000007840)	ENSLAFG00000026823	PRCP (ENSLAFG00000008730)
Tenrec	MODERN SPECIES	7046																AQP11 (ENSETEG00000005257) ##22	ENSETEG00000005260	RSF1 (ENSETEG00000005263)
Xenarthra	ANCESTRAL SPECIES	746													ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958
Sloth	MODERN SPECIES	6396																AQP11 (ENSCHOG00000013193) ##22
Armadillo	MODERN SPECIES	2306												MYO7A (ENSDNOG00000025971)	GDPD4 (ENSDNOG00000010411)	PAK1 (ENSDNOG00000012400)	RSF1 (ENSDNOG00000040916)	AQP11 (ENSDNOG00000009191) ##22	CLNS1A (ENSDNOG00000040279)	AAMDC (ENSDNOG00000001246)	ENSDNOG00000035292	INTS4 (ENSDNOG00000016949)
Marsupialia	ANCESTRAL SPECIES	28	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Marsupialia_b	ANCESTRAL SPECIES	20	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Diprotodontia	ANCESTRAL SPECIES	24	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.e.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Diprotodontia_a	ANCESTRAL SPECIES	25	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.e.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000160351.v
Common wonbat	MODERN SPECIES	342	DGAT2 (ENSVURG00010016956)	UVRAG (ENSVURG00010016946)	WNT11 (ENSVURG00010016934)	ENSVURG00010016929	ENSVURG00010016926	EMSY (ENSVURG00010016923)	LRRC32 (ENSVURG00010016917)	ENSVURG00010016875	ENSVURG00010016858	TSKU (ENSVURG00010016852)	ACER3 (ENSVURG00010016843)	CAPN5 (ENSVURG00010016832)	MYO7A (ENSVURG00010016744)	ENSVURG00010016729	PAK1 (ENSVURG00010016719)	AQP11 (ENSVURG00010016710) ##22	CLNS1A (ENSVURG00010016703)	RSF1 (ENSVURG00010016689)	ENSVURG00010016678	AAMDC (ENSVURG00010016675)	INTS4 (ENSVURG00010016654)	KCTD14 (ENSVURG00010016638)	THRSP (ENSVURG00010016632)	NDUFC2 (ENSVURG00010016626)	ALG8 (ENSVURG00010016605)	KCTD21 (ENSVURG00010016589)	USP35 (ENSVURG00010016572)	GAB2 (ENSVURG00010016550)	NARS2 (ENSVURG00010016527)	ENSVURG00010016515	TENM4 (ENSVURG00010006937)
koala	MODERN SPECIES	35	DGAT2 (ENSPCIG00000009770)	UVRAG (ENSPCIG00000009778)	WNT11 (ENSPCIG00000011373)	ENSPCIG00000011379	ENSPCIG00000011376	EMSY (ENSPCIG00000011389)	LRRC32 (ENSPCIG00000011397)	ENSPCIG00000011400	TSKU (ENSPCIG00000011401)	ACER3 (ENSPCIG00000011402)	CAPN5 (ENSPCIG00000011406)	MYO7A (ENSPCIG00000011525)	ENSPCIG00000012712	ENSPCIG00000033835	ENSPCIG00000031577	AQP11 (ENSPCIG00000012721) ##22	CLNS1A (ENSPCIG00000012722)	ENSPCIG00000036516	RSF1 (ENSPCIG00000032364)	AAMDC (ENSPCIG00000016695)	INTS4 (ENSPCIG00000016702)	THRSP (ENSPCIG00000016747)	ENSPCIG00000035362	NDUFC2 (ENSPCIG00000034850)	ALG8 (ENSPCIG00000016750)	ENSPCIG00000009182	KCTD21 (ENSPCIG00000009181)
Wallaby	MODERN SPECIES	8592																AQP11 (ENSMEUG00000004851) ##22
Tasmanian devil	MODERN SPECIES	2	PAAF1 (ENSSHAG00000013811)	ENSSHAG00000025393	MRPL48 (ENSSHAG00000014091)	ENSSHAG00000022606	PLEKHB1 (ENSSHAG00000002591)	FAM168A (ENSSHAG00000005776)	RELT (ENSSHAG00000007388)	ENSSHAG00000008231	P2RY6 (ENSSHAG00000022365)	P2RY2 (ENSSHAG00000027090)	FCHSD2 (ENSSHAG00000000988)	ATG16L2 (ENSSHAG00000005731)	STARD10 (ENSSHAG00000032218)	ARAP1 (ENSSHAG00000007451)	ENSSHAG00000009267	AQP11 (ENSSHAG00000030748) ##22	CLNS1A (ENSSHAG00000022356)	RSF1 (ENSSHAG00000011229)	INTS4 (ENSSHAG00000012263)	KCTD14 (ENSSHAG00000012725)	THRSP (ENSSHAG00000012966)	NDUFC2 (ENSSHAG00000026567)	ALG8 (ENSSHAG00000023559)	ENSSHAG00000023751	KCTD21 (ENSSHAG00000028062)	ENSSHAG00000021037	GAB2 (ENSSHAG00000018286)	NARS2 (ENSSHAG00000017901)	TENM4 (ENSSHAG00000017334)	ENSSHAG00000029669	PRCP (ENSSHAG00000018162)
Opossum	MODERN SPECIES	3	WNT11 (ENSMODG00000005538)	ENSMODG00000037256	THAP12 (ENSMODG00000005315)	ENSMODG00000027530	EMSY (ENSMODG00000005305)	LRRC32 (ENSMODG00000005278)	ENSMODG00000005266	TSKU (ENSMODG00000024044)	ENSMODG00000005223	ACER3 (ENSMODG00000005216)	CAPN5 (ENSMODG00000005198)	ENSMODG00000005168	ENSMODG00000043534	ENSMODG00000005090	PAK1 (ENSMODG00000005078)	ENSMODG00000005033 ##22	ENSMODG00000005025	RSF1 (ENSMODG00000004917)	ENSMODG00000048703	AAMDC (ENSMODG00000004901)	INTS4 (ENSMODG00000004889)	KCTD14 (ENSMODG00000049333)	THRSP (ENSMODG00000024057)	NDUFC2 (ENSMODG00000039255)	ALG8 (ENSMODG00000004770)	KCTD21 (ENSMODG00000024059)	USP35 (ENSMODG00000004750)	GAB2 (ENSMODG00000004729)	ENSMODG00000049406	ENSMODG00000039785	TENM4 (ENSMODG00000004667)
Platypus	MODERN SPECIES	12	MOGAT2 (ENSOANG00000009381)	DGAT2 (ENSOANG00000014557)	UVRAG (ENSOANG00000014556)	WNT11 (ENSOANG00000049556)	THAP12 (ENSOANG00000000831)	EMSY (ENSOANG00000013569)	LRRC32 (ENSOANG00000047117)	ENSOANG00000001116	ENSOANG00000040240	ACER3 (ENSOANG00000001122)	B3GNT6 (ENSOANG00000044430)	CAPN5 (ENSOANG00000041577)	MYO7A (ENSOANG00000030202)	ENSOANG00000009866	PAK1 (ENSOANG00000009867)	ENSOANG00000009868 ##22	ENSOANG00000009523	RSF1 (ENSOANG00000050976)	ENSOANG00000038615	INTS4 (ENSOANG00000041934)	ENSOANG00000047225	ENSOANG00000045583	ENSOANG00000038394	GAB2 (ENSOANG00000045791)	NARS2 (ENSOANG00000001381)	TENM4 (ENSOANG00000050564)	ENSOANG00000036733	PRCP (ENSOANG00000011106)	RAB30 (ENSOANG00000014498)	PCF11 (ENSOANG00000006552)	ANKRD42 (ENSOANG00000008014)
Sauria	ANCESTRAL SPECIES	2	ENSGT00940000162032	ENSGT00940000156796.l	ENSGT00940000161510	ENSGT00940000161326	ENSGT00610000086191	ENSGT00940000153761.A	ENSGT00940000159306	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b
Archelosauria	ANCESTRAL SPECIES		ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000161326	ENSGT00610000086191	ENSGT00940000153761.A	ENSGT00940000159306	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a
Archosauria	ANCESTRAL SPECIES	2	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000161326	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a
Aves	ANCESTRAL SPECIES	33	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a
Neognathae	ANCESTRAL SPECIES	1	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Galloanserae	ANCESTRAL SPECIES	1	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554.l	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c
Anatidae	ANCESTRAL SPECIES	64	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554.l	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.f	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c	ENSGT00390000004056
Pink-footed goose	MODERN SPECIES	81															PAK1 (ENSABRG00000004635)	AQP11 (ENSABRG00000004675) ##22	CLNS1A (ENSABRG00000004719)	RSF1 (ENSABRG00000004729)	AAMDC (ENSABRG00000004768)	INTS4 (ENSABRG00000004795)	KCTD14 (ENSABRG00000004823)	ENSABRG00000004830	NDUFC2 (ENSABRG00000004836)	ALG8 (ENSABRG00000004842)	KCTD21 (ENSABRG00000004855)	USP35 (ENSABRG00000004859)	GAB2 (ENSABRG00000004871)	ENSABRG00000004892	TENM4 (ENSABRG00000004910)	ENSABRG00000005009	HIKESHI (ENSABRG00000005045)
Duck	MODERN SPECIES		DGAT2 (ENSAPLG00000011172)	UVRAG (ENSAPLG00000010570)	WNT11 (ENSAPLG00000010439)	THAP12 (ENSAPLG00000010379)	EMSY (ENSAPLG00000010078)	ENSAPLG00000009988	ENSAPLG00000009760	TSKU (ENSAPLG00000001790)	ACER3 (ENSAPLG00000009659)	CAPN5 (ENSAPLG00000009147)	OMP (ENSAPLG00000016937)	MYO7A (ENSAPLG00000007675)	GDPD4 (ENSAPLG00000007426)	ENSAPLG00000006771	ENSAPLG00000028244	AQP11 (ENSAPLG00000006765) ##22	ENSAPLG00000006540	RSF1 (ENSAPLG00000018559)	AAMDC (ENSAPLG00000006327)	INTS4 (ENSAPLG00000006018)	ENSAPLG00000029259	KCTD14 (ENSAPLG00000001786)	ENSAPLG00000027987	ALG8 (ENSAPLG00000005720)	KCTD21 (ENSAPLG00000001767)	USP35 (ENSAPLG00000005646)	GAB2 (ENSAPLG00000005487)	NARS2 (ENSAPLG00000005256)	ENSAPLG00000024442	TENM4 (ENSAPLG00000004223)	ENSAPLG00000000696
Phasianidae	ANCESTRAL SPECIES		ENSGT00960000189458	ENSGT01030000234601.c.a.a.g.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554.k	ENSGT00390000009554.l	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352	ENSGT00940000153733.A.c	ENSGT00940000160906	ENSGT00940000160942.c	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c
Phasianidae_b	ANCESTRAL SPECIES		ENSGT01030000234601.c.a.a.g.a.b	ENSGT01030000234601.c.a.a.g.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554.k	ENSGT00390000009554.l	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352	ENSGT00940000153733.A.c	ENSGT00940000160906	ENSGT00940000160942.c	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c
Chicken	MODERN SPECIES		UVRAG (ENSGALG00010002368)	WNT11 (ENSGALG00010002356)	THAP12 (ENSGALG00010002348)	ENSGALG00010002328	ENSGALG00010003829	ENSGALG00010003822	ENSGALG00010002315	ENSGALG00010002312	ENSGALG00010002298	TSKU (ENSGALG00010002282)	ACER3 (ENSGALG00010002211)	CAPN5 (ENSGALG00010002160)	MYO7A (ENSGALG00010002138)	GDPD4 (ENSGALG00010002113)	PAK1 (ENSGALG00010002102)	AQP11 (ENSGALG00010002090) ##22	CLNS1A (ENSGALG00010002065)	RSF1 (ENSGALG00010002054)	AAMDC (ENSGALG00010002039)	INTS4 (ENSGALG00010001997)	KCTD14 (ENSGALG00010001987)	THRSP (ENSGALG00010001976)	THRSPB (ENSGALG00010003522)	NDUFC2 (ENSGALG00010001957)	ALG8 (ENSGALG00010001938)	KCTD21 (ENSGALG00010001928)	USP35 (ENSGALG00010001911)	GAB2 (ENSGALG00010003818)	ENSGALG00010001905	NARS2 (ENSGALG00010001903)	TENM4 (ENSGALG00010009135)
Turkey	MODERN SPECIES		ENSMGAG00000015244	ENSMGAG00000018402	ENSMGAG00000015247	GAB2 (ENSMGAG00000015248)	ENSMGAG00000018248	KCTD21 (ENSMGAG00000017260)	ENSMGAG00000015249	ENSMGAG00000015250	ENSMGAG00000015251	ENSMGAG00000021463	AAMDC (ENSMGAG00000019319)	ENSMGAG00000015254	KCTD14 (ENSMGAG00000015253)	ENSMGAG00000015252	ENSMGAG00000015257	ENSMGAG00000015259 ##22	ENSMGAG00000015258	ENSMGAG00000015260	ENSMGAG00000015261	ENSMGAG00000015262	ENSMGAG00000022413	ENSMGAG00000015263	ENSMGAG00000019989	ENSMGAG00000015640	ENSMGAG00000015265	ENSMGAG00000015318	ENSMGAG00000015267	ENSMGAG00000015268	ENSMGAG00000015269	ENSMGAG00000015272	ENSMGAG00000015273
Japanese quail	MODERN SPECIES		ENSCJPG00005005300	ENSCJPG00005005298	ENSCJPG00005005295	UVRAG (ENSCJPG00005005291)	WNT11 (ENSCJPG00005005289)	THAP12 (ENSCJPG00005005278)	EMSY (ENSCJPG00005005271)	ENSCJPG00005005269	ENSCJPG00005005254	TSKU (ENSCJPG00005005251)	ACER3 (ENSCJPG00005005247)	CAPN5 (ENSCJPG00005005240)	MYO7A (ENSCJPG00005004544)	GDPD4 (ENSCJPG00005004539)	PAK1 (ENSCJPG00005004534)	AQP11 (ENSCJPG00005004531) ##22	CLNS1A (ENSCJPG00005004527)	RSF1 (ENSCJPG00005004525)	AAMDC (ENSCJPG00005004505)	INTS4 (ENSCJPG00005004504)	KCTD14 (ENSCJPG00005004503)	ENSCJPG00005004501	ENSCJPG00005004500	ENSCJPG00005004498	ENSCJPG00005004497	NDUFC2 (ENSCJPG00005004495)	ALG8 (ENSCJPG00005004492)	KCTD21 (ENSCJPG00005004491)	ENSCJPG00005004490	GAB2 (ENSCJPG00005004489)	NARS2 (ENSCJPG00005004456)
Neognathae_b	ANCESTRAL SPECIES		ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b.n.b.b	ENSGT00940000154904.b.n.b.a	ENSGT00940000158779	ENSGT00940000163623.f	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Great tit	MODERN SPECIES		KLRG1 (ENSPMJG00000003406)	ENSPMJG00000003393	ENSPMJG00000003387	ENSPMJG00000003383	ENSPMJG00000003369	ENSPMJG00000003305	ENSPMJG00000003300	ENSPMJG00000003275	TSKU (ENSPMJG00000003272)	ACER3 (ENSPMJG00000003270)	CAPN5 (ENSPMJG00000003043)	ENSPMJG00000003036	MYO7A (ENSPMJG00000002956)	GDPD4 (ENSPMJG00000002946)	PAK1 (ENSPMJG00000002892)	AQP11 (ENSPMJG00000002710) ##22	CLNS1A (ENSPMJG00000002686)	RSF1 (ENSPMJG00000002677)	AAMDC (ENSPMJG00000002671)	INTS4 (ENSPMJG00000002654)	KCTD14 (ENSPMJG00000002652)	ENSPMJG00000002650	NDUFC2 (ENSPMJG00000002647)	ALG8 (ENSPMJG00000002636)	KCTD21 (ENSPMJG00000002622)	USP35 (ENSPMJG00000002606)	GAB2 (ENSPMJG00000002591)	NARS2 (ENSPMJG00000002370)	TENM4 (ENSPMJG00000002222)	ENSPMJG00000001878	HIKESHI (ENSPMJG00000001825)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b.n.b.b	ENSGT00940000154904.b.n.b.a.a	ENSGT00940000158779	ENSGT00940000163623.f	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Flycatcher	MODERN SPECIES		M6PR (ENSFALG00000027874)	KLRG1 (ENSFALG00000007361)	ENSFALG00000007366	ENSFALG00000007399	ENSFALG00000007470	ENSFALG00000007514	ENSFALG00000026315	ENSFALG00000007535	TSKU (ENSFALG00000014969)	ACER3 (ENSFALG00000007565)	ENSFALG00000025819	CAPN5 (ENSFALG00000007567)	MYO7A (ENSFALG00000007572)	GDPD4 (ENSFALG00000007587)	PAK1 (ENSFALG00000007597)	AQP11 (ENSFALG00000007604) ##22	CLNS1A (ENSFALG00000024366)	RSF1 (ENSFALG00000007612)	AAMDC (ENSFALG00000027164)	INTS4 (ENSFALG00000007624)	KCTD14 (ENSFALG00000024292)	ENSFALG00000022877	ENSFALG00000015008	ENSFALG00000015022	ALG8 (ENSFALG00000007638)	KCTD21 (ENSFALG00000015047)	USP35 (ENSFALG00000007648)	GAB2 (ENSFALG00000007657)	NARS2 (ENSFALG00000026154)	TENM4 (ENSFALG00000007664)	ENSFALG00000026075
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b.n.b.b	ENSGT00940000154904.b.n.b.a.b	ENSGT00940000158779	ENSGT00940000163623.f	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Medium ground finch	MODERN SPECIES	147	ENSGFOG00000010872	ENSGFOG00000010866	ENSGFOG00000010860	ENSGFOG00000010844	ENSGFOG00000010833	ENSGFOG00000010799	ENSGFOG00000010760	ENSGFOG00000010750	ENSGFOG00000010720	TSKU (ENSGFOG00000010714)	ACER3 (ENSGFOG00000010704)	CAPN5 (ENSGFOG00000010685)	MYO7A (ENSGFOG00000010562)	GDPD4 (ENSGFOG00000010467)	PAK1 (ENSGFOG00000010446)	AQP11 (ENSGFOG00000010440) ##22	ENSGFOG00000010436	RSF1 (ENSGFOG00000010427)	AAMDC (ENSGFOG00000010415)	INTS4 (ENSGFOG00000010406)	KCTD14 (ENSGFOG00000010398)	ENSGFOG00000010394
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b.n.b.b	ENSGT00940000154904.b.n.b.a.b	ENSGT00940000158779	ENSGT00940000163623.f	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00390000004056	ENSGT00510000047334
Zebra finch	MODERN SPECIES		M6PR (ENSTGUG00000013099)	KLRG1 (ENSTGUG00000020922)	ENSTGUG00000013087	ENSTGUG00000013071	ENSTGUG00000013069	ENSTGUG00000018189	ENSTGUG00000022219	ENSTGUG00000013060	TSKU (ENSTGUG00000029224)	ACER3 (ENSTGUG00000024960)	CAPN5 (ENSTGUG00000013052)	OMP (ENSTGUG00000023275)	MYO7A (ENSTGUG00000013043)	GDPD4 (ENSTGUG00000013039)	PAK1 (ENSTGUG00000013034)	AQP11 (ENSTGUG00000013033) ##22	CLNS1A (ENSTGUG00000013030)	RSF1 (ENSTGUG00000013027)	AAMDC (ENSTGUG00000013026)	INTS4 (ENSTGUG00000013020)	KCTD14 (ENSTGUG00000013019)	ENSTGUG00000013017	ENSTGUG00000020386	ENSTGUG00000027862	ENSTGUG00000020689	ENSTGUG00000022842	NDUFC2 (ENSTGUG00000022186)	ALG8 (ENSTGUG00000013014)	KCTD21 (ENSTGUG00000028148)	ENSTGUG00000021851	USP35 (ENSTGUG00000013010)
Common canary	MODERN SPECIES	4	KLRG1 (ENSSCAG00000000062)	ENSSCAG00000000092	ENSSCAG00000000331	ENSSCAG00000000358	ENSSCAG00000000438	ENSSCAG00000000463	ENSSCAG00000000480	TSKU (ENSSCAG00000000516)	ACER3 (ENSSCAG00000000529)	CAPN5 (ENSSCAG00000000537)	OMP (ENSSCAG00000000545)	MYO7A (ENSSCAG00000000597)	ENSSCAG00000001012	ENSSCAG00000001027	ENSSCAG00000001042	AQP11 (ENSSCAG00000001051) ##22	ENSSCAG00000001060	RSF1 (ENSSCAG00000001065)	AAMDC (ENSSCAG00000001075)	INTS4 (ENSSCAG00000001084)	KCTD14 (ENSSCAG00000001102)	NDUFC2 (ENSSCAG00000001114)	ALG8 (ENSSCAG00000001149)	KCTD21 (ENSSCAG00000001228)	ENSSCAG00000001238	USP35 (ENSSCAG00000001248)	GAB2 (ENSSCAG00000001264)	NARS2 (ENSSCAG00000001306)	TENM4 (ENSSCAG00000001503)	HIKESHI (ENSSCAG00000001551)	EED (ENSSCAG00000001579)
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c
Golden eagle	MODERN SPECIES	10	MOGAT2 (ENSACCG00020010260)	DGAT2 (ENSACCG00020010246)	UVRAG (ENSACCG00020010234)	WNT11 (ENSACCG00020010218)	THAP12 (ENSACCG00020010205)	EMSY (ENSACCG00020010145)	ENSACCG00020010032	ENSACCG00020010023	ENSACCG00020010011	TSKU (ENSACCG00020009994)	ACER3 (ENSACCG00020009979)	CAPN5 (ENSACCG00020009954)	MYO7A (ENSACCG00020009902)	GDPD4 (ENSACCG00020009848)	PAK1 (ENSACCG00020009813)	AQP11 (ENSACCG00020009797) ##22	CLNS1A (ENSACCG00020009776)	RSF1 (ENSACCG00020009744)	AAMDC (ENSACCG00020009724)	INTS4 (ENSACCG00020009671)	KCTD14 (ENSACCG00020009629)	ENSACCG00020009616	ENSACCG00020009607	ENSACCG00020009591	NDUFC2 (ENSACCG00020009583)	ALG8 (ENSACCG00020009570)	KCTD21 (ENSACCG00020009555)	USP35 (ENSACCG00020009536)	GAB2 (ENSACCG00020009521)	NARS2 (ENSACCG00020009489)	TENM4 (ENSACCG00020009361)
Kakapo	MODERN SPECIES	11	DGAT2 (ENSSHBG00005019605)	UVRAG (ENSSHBG00005019598)	WNT11 (ENSSHBG00005019592)	THAP12 (ENSSHBG00005019587)	EMSY (ENSSHBG00005019574)	ENSSHBG00005019566	ENSSHBG00005019563	ENSSHBG00005019561	ENSSHBG00005019559	TSKU (ENSSHBG00005019555)	ACER3 (ENSSHBG00005019550)	CAPN5 (ENSSHBG00005019543)	MYO7A (ENSSHBG00005019272)	GDPD4 (ENSSHBG00005019210)	PAK1 (ENSSHBG00005019173)	AQP11 (ENSSHBG00005019160) ##22	CLNS1A (ENSSHBG00005019157)	RSF1 (ENSSHBG00005019153)	AAMDC (ENSSHBG00005019150)	ENSSHBG00005019147	KCTD14 (ENSSHBG00005019145)	ENSSHBG00005019143	ENSSHBG00005019141	NDUFC2 (ENSSHBG00005019140)	ALG8 (ENSSHBG00005019138)	KCTD21 (ENSSHBG00005019132)	USP35 (ENSSHBG00005019128)	GAB2 (ENSSHBG00005019121)	NARS2 (ENSSHBG00005019116)	TENM4 (ENSSHBG00005016336)	ENSSHBG00005016096
African ostrich	MODERN SPECIES	1067	UVRAG (ENSSCUG00000017535)	WNT11 (ENSSCUG00000017530)	THAP12 (ENSSCUG00000017528)	EMSY (ENSSCUG00000017525)	ENSSCUG00000017524	ENSSCUG00000017521	ENSSCUG00000017520	ENSSCUG00000017518	TSKU (ENSSCUG00000017517)	ENSSCUG00000017515	ACER3 (ENSSCUG00000017514)	CAPN5 (ENSSCUG00000017512)	MYO7A (ENSSCUG00000017496)	GDPD4 (ENSSCUG00000017489)	PAK1 (ENSSCUG00000017487)	AQP11 (ENSSCUG00000017480) ##22	ENSSCUG00000017474	RSF1 (ENSSCUG00000017470)	AAMDC (ENSSCUG00000017468)	INTS4 (ENSSCUG00000017442)	KCTD14 (ENSSCUG00000017439)
Australian saltwater crocodile	MODERN SPECIES	27	ENSCPRG00005016765	UVRAG (ENSCPRG00005016749)	WNT11 (ENSCPRG00005016733)	THAP12 (ENSCPRG00005016723)	EMSY (ENSCPRG00005016708)	ENSCPRG00005016690	ENSCPRG00005016678	ENSCPRG00005016675	ENSCPRG00005016671	TSKU (ENSCPRG00005016664)	ACER3 (ENSCPRG00005016661)	OMP (ENSCPRG00005016654)	CAPN5 (ENSCPRG00005016650)	MYO7A (ENSCPRG00005016611)	PAK1 (ENSCPRG00005016581)	AQP11 (ENSCPRG00005016566) ##22	CLNS1A (ENSCPRG00005016564)	RSF1 (ENSCPRG00005016559)	AAMDC (ENSCPRG00005016554)	INTS4 (ENSCPRG00005016547)	KCTD14 (ENSCPRG00005016541)	THRSP (ENSCPRG00005016537)	NDUFC2 (ENSCPRG00005016533)	ALG8 (ENSCPRG00005016526)	KCTD21 (ENSCPRG00005016523)	USP35 (ENSCPRG00005016511)	GAB2 (ENSCPRG00005016506)	NARS2 (ENSCPRG00005016483)	ENSCPRG00005016320	TENM4 (ENSCPRG00005016289)	ENSCPRG00005016261
Cryptodira	ANCESTRAL SPECIES		ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a.u	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c.c
Emydidae	ANCESTRAL SPECIES	19	ENSGT00940000161093	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a.u	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c.c
painted turtle	MODERN SPECIES	792	MAP6 (ENSCPBG00000027688)	MOGAT2 (ENSCPBG00000027691)	DGAT2 (ENSCPBG00000027699)	UVRAG (ENSCPBG00000027703)	WNT11 (ENSCPBG00000027708)	THAP12 (ENSCPBG00000027710)	EMSY (ENSCPBG00000027714)	ENSCPBG00000027719	TSKU (ENSCPBG00000027723)	ACER3 (ENSCPBG00000027726)	ENSCPBG00000027727	CAPN5 (ENSCPBG00000027729)	MYO7A (ENSCPBG00000027740)	GDPD4 (ENSCPBG00000027787)	PAK1 (ENSCPBG00000027789)	AQP11 (ENSCPBG00000027790) ##22	CLNS1A (ENSCPBG00000027791)	RSF1 (ENSCPBG00000027792)	AAMDC (ENSCPBG00000027793)	INTS4 (ENSCPBG00000027794)	KCTD14 (ENSCPBG00000027796)	THRSP (ENSCPBG00000027797)	NDUFC2 (ENSCPBG00000027798)	ALG8 (ENSCPBG00000027799)	KCTD21 (ENSCPBG00000027801)	USP35 (ENSCPBG00000027802)	GAB2 (ENSCPBG00000027803)
Three-toed box turtle	MODERN SPECIES	2155																ENSTMTG00000018521 ##22
Testudinidae	ANCESTRAL SPECIES		ENSGT01100000263559.B	ENSGT01060000248528.b.kh	ENSGT01100000263504.a.b.b.b.b	ENSGT01100000263474.a.b.b.j.b.b.b.a.b	ENSGT01100000263504.a.b.b.b.a.a	ENSGT01100000263474.a.b.b.k	ENSGT00940000153092.a.a	ENSGT01100000263559.A.f	ENSGT01060000248528.b.jh.a.b	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a.u	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c.c
Goode s thornscrub tortoise	MODERN SPECIES		DGAT2 (ENSGEVG00005000559)	UVRAG (ENSGEVG00005000579)	WNT11 (ENSGEVG00005000625)	THAP12 (ENSGEVG00005000657)	EMSY (ENSGEVG00005000727)	ENSGEVG00005000778	ENSGEVG00005000789	TSKU (ENSGEVG00005000802)	ENSGEVG00005000810	ENSGEVG00005000823	ENSGEVG00005000839	CAPN5 (ENSGEVG00005000863)	MYO7A (ENSGEVG00005000901)	ENSGEVG00005000949	PAK1 (ENSGEVG00005001045)	AQP11 (ENSGEVG00005001145) ##22	RSF1 (ENSGEVG00005001189)	AAMDC (ENSGEVG00005001244)	INTS4 (ENSGEVG00005001269)	KCTD14 (ENSGEVG00005001299)	THRSP (ENSGEVG00005001313)	NDUFC2 (ENSGEVG00005001319)	ALG8 (ENSGEVG00005001411)	ENSGEVG00005001605	KCTD21 (ENSGEVG00005001618)	USP35 (ENSGEVG00005001635)	GAB2 (ENSGEVG00005001656)	NARS2 (ENSGEVG00005001682)	ENSGEVG00005001716	TENM4 (ENSGEVG00005001737)	ENSGEVG00005001781
Abingdon island giant tortoise	MODERN SPECIES	2786													SLC30A1 (ENSCABG00000001652)	ENSCABG00000001651	ENSCABG00000001647	AQP11 (ENSCABG00000001641) ##22	CLNS1A (ENSCABG00000001639)	RSF1 (ENSCABG00000001219)	AAMDC (ENSCABG00000001198)	INTS4 (ENSCABG00000000838)	KCTD14 (ENSCABG00000000823)	THRSP (ENSCABG00000000819)	NDUFC2 (ENSCABG00000000818)	ALG8 (ENSCABG00000000675)	KCTD21 (ENSCABG00000000667)
Chinese turtle	MODERN SPECIES	1765													GDPD4 (ENSPSIG00000005088)	ENSPSIG00000001404	PAK1 (ENSPSIG00000004781)	AQP11 (ENSPSIG00000004713) ##22	CLNS1A (ENSPSIG00000004706)	RSF1 (ENSPSIG00000004628)	AAMDC (ENSPSIG00000004604)	INTS4 (ENSPSIG00000004261)	KCTD14 (ENSPSIG00000001388)	THRSP (ENSPSIG00000001362)	NDUFC2 (ENSPSIG00000004249)	ALG8 (ENSPSIG00000004217)	KCTD21 (ENSPSIG00000001339)	USP35 (ENSPSIG00000004110)	GAB2 (ENSPSIG00000003979)	NARS2 (ENSPSIG00000003892)	ENSPSIG00000003812	TENM4 (ENSPSIG00000003653)
Lepidosauria	ANCESTRAL SPECIES	17	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b
Episquamata	ANCESTRAL SPECIES	2	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00990000211477	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Toxicofera	ANCESTRAL SPECIES	9				ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00990000211477	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Elapidae	ANCESTRAL SPECIES	10															ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Elapidae_a	ANCESTRAL SPECIES	41															ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Blue-lipped sea krait	MODERN SPECIES	1976																AQP11 (ENSLLTG00000010639) ##22	ENSLLTG00000010606
Acanthophiinae	ANCESTRAL SPECIES	42															ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00940000175310	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Eastern brown snake	MODERN SPECIES	33											WNT11 (ENSPTXG00000002528)	UVRAG (ENSPTXG00000002550)	DGAT2 (ENSPTXG00000003150)	MOGAT2 (ENSPTXG00000003154)	PAK1 (ENSPTXG00000003159)	AQP11 (ENSPTXG00000003161) ##22	ENSPTXG00000003162	CLNS1A (ENSPTXG00000003163)	RSF1 (ENSPTXG00000003165)	AAMDC (ENSPTXG00000003168)	INTS4 (ENSPTXG00000003170)	KCTD14 (ENSPTXG00000003171)	ENSPTXG00000003172	ENSPTXG00000003173	ALG8 (ENSPTXG00000003175)	KCTD21 (ENSPTXG00000003177)	USP35 (ENSPTXG00000003178)	GAB2 (ENSPTXG00000003179)	NARS2 (ENSPTXG00000003181)	TENM4 (ENSPTXG00000003182)	ENSPTXG00000003184
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	547															ENSNSUG00000015868	ENSNSUG00000015869 ##22	CLNS1A (ENSNSUG00000015870)	RSF1 (ENSNSUG00000015871)	ENSNSUG00000015872	AAMDC (ENSNSUG00000015873)	INTS4 (ENSNSUG00000015874)
Mainland tiger snake	MODERN SPECIES	1840																ENSNSUG00000005248 ##22
Indian cobra	MODERN SPECIES	4	ENSNNAG00000007643	HPX (ENSNNAG00000007683)	TRIM3 (ENSNNAG00000007745)	ARFIP2 (ENSNNAG00000007774)	TIMM10B (ENSNNAG00000007814)	ENSNNAG00000007844	RRP8 (ENSNNAG00000007872)	ILK (ENSNNAG00000007912)	TAF10 (ENSNNAG00000007958)	TPP1 (ENSNNAG00000007995)	ENSNNAG00000008113	LCMT2 (ENSNNAG00000008289)	PGM2L1 (ENSNNAG00000008416)	ENSNNAG00000008441	MOGAT2 (ENSNNAG00000008472)	AQP11 (ENSNNAG00000008779) ##22	CLNS1A (ENSNNAG00000008814)	WNT11 (ENSNNAG00000008841)	GDPD5 (ENSNNAG00000008885)	ENSNNAG00000008901
Lizard	MODERN SPECIES	951										ENSACAG00000002736	MYO7A (ENSACAG00000002274)	ENSACAG00000002220	ENSACAG00000040917	PAK1 (ENSACAG00000001968)	ENSACAG00000039546	AQP11 (ENSACAG00000022958) ##22	ENSACAG00000001960	ENSACAG00000029679	ENSACAG00000035046	RSF1 (ENSACAG00000001901)	AAMDC (ENSACAG00000001888)	INTS4 (ENSACAG00000001754)	KCTD14 (ENSACAG00000007126)	ENSACAG00000022766	ENSACAG00000036288	ENSACAG00000012500	ENSACAG00000039971	ALG8 (ENSACAG00000012469)	KCTD21 (ENSACAG00000012466)	ENSACAG00000035907	ENSACAG00000012407
Laterata	ANCESTRAL SPECIES	3	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00990000211477	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352	ENSGT00940000153733.A	ENSGT00940000160906	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a.n	ENSGT01100000263477.D.c.a.b
Argentine black and white tegu	MODERN SPECIES	24	ENSSMRG00000007053	WNT11 (ENSSMRG00000007054)	THAP12 (ENSSMRG00000007080)	EMSY (ENSSMRG00000007092)	ENSSMRG00000007124	ENSSMRG00000007128	ENSSMRG00000007152	TSKU (ENSSMRG00000007173)	ACER3 (ENSSMRG00000007174)	CAPN5 (ENSSMRG00000007186)	ENSSMRG00000007194	MYO7A (ENSSMRG00000007279)	GDPD4 (ENSSMRG00000007296)	PAK1 (ENSSMRG00000007311)	ENSSMRG00000007332	AQP11 (ENSSMRG00000007336) ##22	CLNS1A (ENSSMRG00000007338)	RSF1 (ENSSMRG00000007345)	AAMDC (ENSSMRG00000007349)	INTS4 (ENSSMRG00000007351)	KCTD14 (ENSSMRG00000007360)	ENSSMRG00000007384	NDUFC2 (ENSSMRG00000007385)	ALG8 (ENSSMRG00000007393)	KCTD21 (ENSSMRG00000007395)	USP35 (ENSSMRG00000007396)	GAB2 (ENSSMRG00000007428)	TENM4 (ENSSMRG00000007475)	ENSSMRG00000007527	ENSSMRG00000007541	FAM181B (ENSSMRG00000007572)
tuatara	MODERN SPECIES	891											CAPN5 (ENSSPUG00000011865)	MYO7A (ENSSPUG00000011932)	GDPD4 (ENSSPUG00000012097)	ENSSPUG00000012120	ENSSPUG00000012143	AQP11 (ENSSPUG00000012154) ##22	CLNS1A (ENSSPUG00000012157)	ENSSPUG00000012176	ENSSPUG00000012237	AAMDC (ENSSPUG00000012352)	INTS4 (ENSSPUG00000012396)	KCTD14 (ENSSPUG00000012507)	NDUFC2 (ENSSPUG00000012526)	ENSSPUG00000012542	ENSSPUG00000012557	USP35 (ENSSPUG00000012584)	GAB2 (ENSSPUG00000012624)	NARS2 (ENSSPUG00000012642)	ENSSPUG00000012680	TENM4 (ENSSPUG00000012736)
Anura	ANCESTRAL SPECIES	28	ENSGT00940000161093	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00390000009554	ENSGT00940000163623.j	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c ##22	ENSGT00390000010063	ENSGT00530000064411	ENSGT00390000011958	ENSGT00390000010128	ENSGT00940000160762	ENSGT00940000153733.A	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000166008	ENSGT00940000156875	ENSGT00440000034259.b
Leishan spiny toad	MODERN SPECIES	5	KCTD14 (ENSLLEG00000004200)	TMEM135 (ENSLLEG00000004184)	ENSLLEG00000004175	FZD4 (ENSLLEG00000004168)	ENSLLEG00000004141	ME3 (ENSLLEG00000003909)	ENSLLEG00000003900	PRSS23 (ENSLLEG00000003893)	ENSLLEG00000003887	CCDC81 (ENSLLEG00000003829)	MOCS3 (ENSLLEG00000003803)	ENSLLEG00000003796	EED (ENSLLEG00000003752)	ENSLLEG00000003726	PICALM (ENSLLEG00000003542)	AQP11 (ENSLLEG00000003475) ##22	CLNS1A (ENSLLEG00000003456)	ENSLLEG00000003432	RSF1 (ENSLLEG00000003406)	ENSLLEG00000003395	ENSLLEG00000003345	ENSLLEG00000003335	ENSLLEG00000003327	NEU3 (ENSLLEG00000003294)	ENSLLEG00000003281	XRRA1 (ENSLLEG00000003211)	RNF169 (ENSLLEG00000003192)	ENSLLEG00000003139	CHRDL2 (ENSLLEG00000003113)	ENSLLEG00000003107	ENSLLEG00000003101
Frog	MODERN SPECIES	2	dgat2 (ENSXETG00000025317)	mogat2.2 (ENSXETG00000015062)	map6 (ENSXETG00000015061)	ENSXETG00000025318	ENSXETG00000044887	gdpd5 (ENSXETG00000015053)	ENSXETG00000036724	fchsd2 (ENSXETG00000010734)	ENSXETG00000010732	rps3 (ENSXETG00000010729)	ENSXETG00000010725	p2ry2 (ENSXETG00000039207)	myo7a (ENSXETG00000010706)	XB877238 [provisional:gdpd5] (ENSXETG00000046669)	pak1 (ENSXETG00000010703)	aqp11 (ENSXETG00000030889) ##22	picalm (ENSXETG00000032563)	ENSXETG00000042352	CCDC83 (ENSXETG00000010700)	sytl2 (ENSXETG00000012793)	ENSXETG00000045431	CREBZF (ENSXETG00000037796)	tmem126a (ENSXETG00000012738)	ENSXETG00000038687	ENSXETG00000041747	ENSXETG00000045322	dlg2 (ENSXETG00000012737)	ccdc90b (ENSXETG00000013639)	ankrd42 (ENSXETG00000033972)	pcf11 (ENSXETG00000013634)	rab30 (ENSXETG00000013633)
Coelacanth	MODERN SPECIES	1526															pak1 (ENSLACG00000007848)	AQP11 (ENSLACG00000006500) ##22	CLNS1A (ENSLACG00000005275)	RSF1 (ENSLACG00000002272)	AAMDC (ENSLACG00000001389)
Cyclostomata	ANCESTRAL SPECIES	717																ENSGT00530000063816.c ##22	ENSGT00390000010063
Hagfish	MODERN SPECIES	636	ENSEBUG00000007148	ENSEBUG00000009384	ENSEBUG00000004450	ENSEBUG00000013146	ENSEBUG00000005041	ENSEBUG00000011244	ENSEBUG00000015935	ENSEBUG00000016596	ENSEBUG00000010911	ENSEBUG00000016556	RAPGEF2 (ENSEBUG00000010166)	ENSEBUG00000005344	ENSEBUG00000010295	itm2ba (ENSEBUG00000012080)	ENSEBUG00000006266	aqp11 (ENSEBUG00000013906) ##22	ENSEBUG00000002566	ENSEBUG00000002371