Vertebrata	ANCESTRAL SPECIES	563																ENSGT00530000063816.c #22	ENSGT00390000010063 #23
Gnathostomata	ANCESTRAL SPECIES	1281																ENSGT00530000063816.c #22	ENSGT00390000010063 #23
Euteleostomi	ANCESTRAL SPECIES	335											ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000166878	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29
Sarcopterygii	ANCESTRAL SPECIES	247										ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32
Tetrapoda	ANCESTRAL SPECIES		ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Amniota	ANCESTRAL SPECIES		ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Mammalia	ANCESTRAL SPECIES	7	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Theria	ANCESTRAL SPECIES	15	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Eutheria	ANCESTRAL SPECIES	3	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00530000063516.a.a.c.b	ENSGT00940000169601	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Primates	ANCESTRAL SPECIES		ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Haplorrhini	ANCESTRAL SPECIES		ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Simiiformes	ANCESTRAL SPECIES		ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00940000155959.n ##26	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000008403.ab	ENSGT00390000002365.x.d.a
Cebidae	ANCESTRAL SPECIES		ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00940000155959.n ##26	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000008403.ab	ENSGT00390000002365.x.d.a
Cebidae_a	ANCESTRAL SPECIES	73																ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00940000155959.n ##26	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT00840000129953.c	ENSGT01030000234618.D	ENSGT00390000008403.ab
Capuchin	MODERN SPECIES	693																AQP11 (ENSCCAG00000028904) #22	CLNS1A (ENSCCAG00000028678) #23	RSF1 (ENSCCAG00000029286) #24	AAMDC (ENSCCAG00000030156) #25	ENSCCAG00000028445 #26	ENSCCAG00000021670 #27	INTS4 (ENSCCAG00000027747) #28	KCTD14 (ENSCCAG00000030700) #29	ENSCCAG00000028542 #30	NDUFC2 (ENSCCAG00000029958) #31	ALG8 (ENSCCAG00000020475) #32	KCTD21 (ENSCCAG00000003376) #33
Bolivian squirrel monkey	MODERN SPECIES	111																AQP11 (ENSSBOG00000025232) #22	ENSSBOG00000002716	RSF1 (ENSSBOG00000034331) #24	ENSSBOG00000023955	AAMDC (ENSSBOG00000028864) #25	INTS4 (ENSSBOG00000029194) #28	ENSSBOG00000003211 ##26	KCTD14 (ENSSBOG00000022366) #29	THRSP (ENSSBOG00000034227)	NDUFC2 (ENSSBOG00000022978) #31	ALG8 (ENSSBOG00000023607) #32	KCTD21 (ENSSBOG00000036354) #33	USP35 (ENSSBOG00000026711)	GAB2 (ENSSBOG00000020898)	ENSSBOG00000017060	ENSSBOG00000022679
Marmoset	MODERN SPECIES	2	THAP12 (ENSCJAG00000012300)	GVQW3 (ENSCJAG00000015286)	EMSY (ENSCJAG00000015204)	LRRC32 (ENSCJAG00000041496)	TSKU (ENSCJAG00000015198)	ACER3 (ENSCJAG00000015179)	B3GNT6 (ENSCJAG00000048141)	CAPN5 (ENSCJAG00000015126)	ENSCJAG00000081839	MYO7A (ENSCJAG00000015009)	ENSCJAG00000077361	GDPD4 (ENSCJAG00000015002)	PAK1 (ENSCJAG00000014954)	ENSCJAG00000070241	ENSCJAG00000073608	AQP11 (ENSCJAG00000014939) #22	CLNS1A (ENSCJAG00000014927) #23	RSF1 (ENSCJAG00000014899) #24	ENSCJAG00000014890 #25	ENSCJAG00000077936	INTS4 (ENSCJAG00000014825) #28	KCTD14 (ENSCJAG00000014824) #29	ENSCJAG00000021760	THRSP (ENSCJAG00000022085)	ENSCJAG00000014820	NDUFC2 (ENSCJAG00000066176) #31	ALG8 (ENSCJAG00000014792) #32	KCTD21 (ENSCJAG00000043935) #33	USP35 (ENSCJAG00000014781)	ENSCJAG00000069693	GAB2 (ENSCJAG00000014753)
Mas night monkey	MODERN SPECIES	575	DGAT2 (ENSANAG00000033159)	UVRAG (ENSANAG00000037389)	WNT11 (ENSANAG00000023221)	THAP12 (ENSANAG00000034553)	GVQW3 (ENSANAG00000033324)	EMSY (ENSANAG00000037605)	LRRC32 (ENSANAG00000036098)	TSKU (ENSANAG00000028760)	ACER3 (ENSANAG00000031758)	CAPN5 (ENSANAG00000032657)	MYO7A (ENSANAG00000023144)	GDPD4 (ENSANAG00000030211)	PAK1 (ENSANAG00000019562)	ENSANAG00000029802	ENSANAG00000031650	AQP11 (ENSANAG00000032006) #22	ENSANAG00000010001 #23	RSF1 (ENSANAG00000024984) #24	AAMDC (ENSANAG00000031884) #25	INTS4 (ENSANAG00000005253) #28	ENSANAG00000037311 ##26	KCTD14 (ENSANAG00000032585) #29	NDUFC2 (ENSANAG00000032706) #31	ENSANAG00000035549	ALG8 (ENSANAG00000028151) #32	KCTD21 (ENSANAG00000008887) #33	USP35 (ENSANAG00000023780)	GAB2 (ENSANAG00000033147)	NARS2 (ENSANAG00000022061)	ENSANAG00000023487	ENSANAG00000027040
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00530000063516.a.a.c.b.y.a	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01090000260123.a	ENSGT00940000162817	ENSGT00940000163821.a
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.n #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01090000260123.a	ENSGT00940000162817	ENSGT00940000163821.a
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.n #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00390000011376.e.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00440000033232.d	ENSGT00390000009554.o	ENSGT00910000147490	ENSGT00390000009554.p	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.n #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00390000011376.e.b
Gorilla	MODERN SPECIES	2	DGAT2 (ENSGGOG00000002910)	UVRAG (ENSGGOG00000002911)	WNT11 (ENSGGOG00000015024)	THAP12 (ENSGGOG00000006152)	GVQW3 (ENSGGOG00000027994)	EMSY (ENSGGOG00000012926)	LRRC32 (ENSGGOG00000001727)	TSKU (ENSGGOG00000008670)	ACER3 (ENSGGOG00000003818)	B3GNT6 (ENSGGOG00000000016)	CAPN5 (ENSGGOG00000008071)	MYO7A (ENSGGOG00000008082)	ENSGGOG00000008102	ENSGGOG00000043330	PAK1 (ENSGGOG00000003150)	AQP11 (ENSGGOG00000011985) #22	CLNS1A (ENSGGOG00000003091) #23	RSF1 (ENSGGOG00000001833) #24	ENSGGOG00000023151	ENSGGOG00000013088 #25	ENSGGOG00000001515 #28	ENSGGOG00000043528 #28	KCTD14 (ENSGGOG00000013554) #29	NDUFC2 (ENSGGOG00000041901) #31	THRSP (ENSGGOG00000003652)	ALG8 (ENSGGOG00000011611) #32	KCTD21 (ENSGGOG00000010076) #33	ENSGGOG00000037208	USP35 (ENSGGOG00000010079)	GAB2 (ENSGGOG00000010086)	ENSGGOG00000026279
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00440000033232.d	ENSGT00390000009554.o	ENSGT00910000147490	ENSGT00390000009554.p	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.n #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00390000011376.e.b
Pan	ANCESTRAL SPECIES	1	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.a	ENSGT00440000033232.d	ENSGT00390000009554.o	ENSGT00910000147490	ENSGT00390000009554.p	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.n #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00390000011376.e.b
Chimpanzee	MODERN SPECIES	2	UVRAG (ENSPTRG00000004088)	WNT11 (ENSPTRG00000004090)	THAP12 (ENSPTRG00000004091)	ENSPTRG00000028470	ENSPTRG00000049644	EMSY (ENSPTRG00000004093)	LRRC32 (ENSPTRG00000004094)	TSKU (ENSPTRG00000028468)	ACER3 (ENSPTRG00000004096)	B3GNT6 (ENSPTRG00000023606)	CAPN5 (ENSPTRG00000049993)	MYO7A (ENSPTRG00000004098)	GDPD4 (ENSPTRG00000004100)	ENSPTRG00000048327	PAK1 (ENSPTRG00000004101)	AQP11 (ENSPTRG00000004103) #22	CLNS1A (ENSPTRG00000048842) #23	RSF1 (ENSPTRG00000004105) #24	AAMDC (ENSPTRG00000004106) #25	INTS4 (ENSPTRG00000004108) #28	KCTD14 (ENSPTRG00000004109) #29	NDUFC2 (ENSPTRG00000047123) #31	THRSP (ENSPTRG00000004110)	ALG8 (ENSPTRG00000004112) #32	KCTD21 (ENSPTRG00000044559) #33	ENSPTRG00000046421	USP35 (ENSPTRG00000051443)	GAB2 (ENSPTRG00000004115)	NARS2 (ENSPTRG00000004117)	TENM4 (ENSPTRG00000004118)	ENSPTRG00000045487
Bonobo	MODERN SPECIES	2	WNT11 (ENSPPAG00000010959)	ENSPPAG00000030327	ENSPPAG00000038460	ENSPPAG00000028053	THAP12 (ENSPPAG00000005479)	ENSPPAG00000027471	LRRC32 (ENSPPAG00000028327)	TSKU (ENSPPAG00000025259)	ACER3 (ENSPPAG00000015516)	B3GNT6 (ENSPPAG00000004892)	CAPN5 (ENSPPAG00000034162)	MYO7A (ENSPPAG00000035116)	GDPD4 (ENSPPAG00000033740)	ENSPPAG00000033073	PAK1 (ENSPPAG00000042768)	AQP11 (ENSPPAG00000030812) #22	CLNS1A (ENSPPAG00000035940) #23	RSF1 (ENSPPAG00000020888) #24	ENSPPAG00000043844	ENSPPAG00000022805 #25	ENSPPAG00000026625 #28	ENSPPAG00000035381 #28	KCTD14 (ENSPPAG00000042258) #29	NDUFC2 (ENSPPAG00000039205) #31	THRSP (ENSPPAG00000023087)	ALG8 (ENSPPAG00000029627) #32	KCTD21 (ENSPPAG00000000521) #33	ENSPPAG00000002837	USP35 (ENSPPAG00000038381)	GAB2 (ENSPPAG00000029980)	NARS2 (ENSPPAG00000028317)
Human	MODERN SPECIES	2	UVRAG (ENSG00000198382)	WNT11 (ENSG00000085741)	THAP12 (ENSG00000137492)	GVQW3 (ENSG00000179240)	EMSY (ENSG00000158636)	LRRC32 (ENSG00000137507)	TSKU (ENSG00000182704)	ACER3 (ENSG00000078124)	B3GNT6 (ENSG00000198488)	CAPN5 (ENSG00000149260)	OMP (ENSG00000254550)	MYO7A (ENSG00000137474)	GDPD4 (ENSG00000178795)	PAK1 (ENSG00000149269)	CLNS1A (ENSG00000074201) #23	AQP11 (ENSG00000178301) #22	RSF1 (ENSG00000048649) #24	AAMDC (ENSG00000087884) #25	INTS4 (ENSG00000149262) #28	KCTD14 (ENSG00000151364) #29	NDUFC2-KCTD14 (ENSG00000259112)	THRSP (ENSG00000151365)	NDUFC2 (ENSG00000151366) #31	ALG8 (ENSG00000159063) #32	KCTD21 (ENSG00000188997) #33	USP35 (ENSG00000118369)	GAB2 (ENSG00000033327)	NARS2 (ENSG00000137513)	TENM4 (ENSG00000149256)	FAM181B (ENSG00000182103)	PRCP (ENSG00000137509)
Orangutan	MODERN SPECIES	2	WNT11 (ENSPPYG00000003696)	ENSPPYG00000040892	THAP12 (ENSPPYG00000003697)	ENSPPYG00000003698	EMSY (ENSPPYG00000003699)	LRRC32 (ENSPPYG00000003700)	TSKU (ENSPPYG00000003702)	ACER3 (ENSPPYG00000003703)	B3GNT6 (ENSPPYG00000003704)	CAPN5 (ENSPPYG00000003705)	MYO7A (ENSPPYG00000003706)	ENSPPYG00000003707	ENSPPYG00000035320	PAK1 (ENSPPYG00000003708)	ENSPPYG00000003709	AQP11 (ENSPPYG00000003711) #22	CLNS1A (ENSPPYG00000003712) #23	RSF1 (ENSPPYG00000003713) #24	ENSPPYG00000003714 #25	INTS4 (ENSPPYG00000003715) #28	KCTD14 (ENSPPYG00000003716) #29	THRSP (ENSPPYG00000003717)	NDUFC2 (ENSPPYG00000036421) #31	ALG8 (ENSPPYG00000003719) #32	KCTD21 (ENSPPYG00000003720) #33	ENSPPYG00000003721	USP35 (ENSPPYG00000003722)	GAB2 (ENSPPYG00000003723)	NARS2 (ENSPPYG00000003725)	TENM4 (ENSPPYG00000003726)	FAM181B (ENSPPYG00000003728)
Gibbon	MODERN SPECIES	5	WNT11 (ENSNLEG00000016841)	ENSNLEG00000032732	ENSNLEG00000033823	ENSNLEG00000028651	EMSY (ENSNLEG00000016812)	LRRC32 (ENSNLEG00000016810)	TSKU (ENSNLEG00000033845)	ACER3 (ENSNLEG00000034984)	B3GNT6 (ENSNLEG00000016789)	OMP (ENSNLEG00000016787)	CAPN5 (ENSNLEG00000016775)	MYO7A (ENSNLEG00000016747)	GDPD4 (ENSNLEG00000016736)	ENSNLEG00000030724	PAK1 (ENSNLEG00000016711)	AQP11 (ENSNLEG00000016709) #22	CLNS1A (ENSNLEG00000016699) #23	RSF1 (ENSNLEG00000016681) #24	ENSNLEG00000033096 #25	INTS4 (ENSNLEG00000026995) #28	KCTD14 (ENSNLEG00000026663) #29	THRSP (ENSNLEG00000036237)	ENSNLEG00000032308 #31	ALG8 (ENSNLEG00000027080) #32	ENSNLEG00000030722	KCTD21 (ENSNLEG00000030708) #33	USP35 (ENSNLEG00000028871)	GAB2 (ENSNLEG00000016667)	ENSNLEG00000030860	NARS2 (ENSNLEG00000016643)	TENM4 (ENSNLEG00000016615)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00530000063516.a.a.c.b.y.a	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00530000063516.a.a.c.b.y.a	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Vervet Monkey	MODERN SPECIES		MAP6 (ENSCSAG00000003908)	MOGAT2 (ENSCSAG00000003906)	DGAT2 (ENSCSAG00000003904)	UVRAG (ENSCSAG00000003902)	WNT11 (ENSCSAG00000003899)	THAP12 (ENSCSAG00000003894)	EMSY (ENSCSAG00000003885)	LRRC32 (ENSCSAG00000003880)	TSKU (ENSCSAG00000000618)	ACER3 (ENSCSAG00000003878)	B3GNT6 (ENSCSAG00000000617)	CAPN5 (ENSCSAG00000003875)	MYO7A (ENSCSAG00000003861)	GDPD4 (ENSCSAG00000003828)	PAK1 (ENSCSAG00000003823)	AQP11 (ENSCSAG00000003819) #22	CLNS1A (ENSCSAG00000003818) #23	RSF1 (ENSCSAG00000003816) #24	AAMDC (ENSCSAG00000003812) #25	INTS4 (ENSCSAG00000003811) #28	KCTD14 (ENSCSAG00000003806) #29	THRSP (ENSCSAG00000000616)	NDUFC2 (ENSCSAG00000003804) #31	ALG8 (ENSCSAG00000003802) #32	KCTD21 (ENSCSAG00000000615) #33	USP35 (ENSCSAG00000003800)	GAB2 (ENSCSAG00000003797)	NARS2 (ENSCSAG00000003793)	TENM4 (ENSCSAG00000003773)	FAM181B (ENSCSAG00000000614)	PRCP (ENSCSAG00000003715)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234566.e.b.b.a
Macaca	ANCESTRAL SPECIES	2	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234566.e.b.b.a
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263539.b.b.b.b.a.a.b.b.b.b.a
Rhesus	MODERN SPECIES	5	UVRAG (ENSMMUG00000000187)	WNT11 (ENSMMUG00000051614)	THAP12 (ENSMMUG00000048604)	GVQW3 (ENSMMUG00000059619)	EMSY (ENSMMUG00000022401)	LRRC32 (ENSMMUG00000022403)	TSKU (ENSMMUG00000058889)	ACER3 (ENSMMUG00000018168)	ENSMMUG00000050497	B3GNT6 (ENSMMUG00000050318)	CAPN5 (ENSMMUG00000018174)	OMP (ENSMMUG00000055575)	MYO7A (ENSMMUG00000018178)	GDPD4 (ENSMMUG00000018188)	PAK1 (ENSMMUG00000001387)	AQP11 (ENSMMUG00000018944) #22	CLNS1A (ENSMMUG00000018945) #23	RSF1 (ENSMMUG00000017355) #24	AAMDC (ENSMMUG00000010119) #25	INTS4 (ENSMMUG00000010120) #28	ENSMMUG00000063047	KCTD14 (ENSMMUG00000017471) #29	NDUFC2 (ENSMMUG00000050672) #31	THRSP (ENSMMUG00000017470)	ALG8 (ENSMMUG00000017472) #32	KCTD21 (ENSMMUG00000017473) #33	ENSMMUG00000051695	USP35 (ENSMMUG00000017476)	GAB2 (ENSMMUG00000017477)	NARS2 (ENSMMUG00000004649)	TENM4 (ENSMMUG00000042218)
Crab-eating macaque	MODERN SPECIES	5	UVRAG (ENSMFAG00000001657)	WNT11 (ENSMFAG00000043196)	THAP12 (ENSMFAG00000033682)	ENSMFAG00000042788	ENSMFAG00000052205	EMSY (ENSMFAG00000041695)	LRRC32 (ENSMFAG00000039295)	ENSMFAG00000049800	TSKU (ENSMFAG00000024120)	ACER3 (ENSMFAG00000041221)	ENSMFAG00000054763	CAPN5 (ENSMFAG00000043060)	OMP (ENSMFAG00000049511)	MYO7A (ENSMFAG00000044666)	GDPD4 (ENSMFAG00000003264)	AQP11 (ENSMFAG00000001663) #22	CLNS1A (ENSMFAG00000043186) #23	RSF1 (ENSMFAG00000001930) #24	AAMDC (ENSMFAG00000034422) #25	INTS4 (ENSMFAG00000020209) #28	KCTD14 (ENSMFAG00000030889) #29	NDUFC2 (ENSMFAG00000030802) #31	THRSP (ENSMFAG00000060688)	ALG8 (ENSMFAG00000002110) #32	KCTD21 (ENSMFAG00000060342) #33	ENSMFAG00000023980	USP35 (ENSMFAG00000001255)	GAB2 (ENSMFAG00000003506)	NARS2 (ENSMFAG00000033477)	ENSMFAG00000058364	ENSMFAG00000058725
Pig-tailed macaque	MODERN SPECIES	423	UVRAG (ENSMNEG00000036116)	WNT11 (ENSMNEG00000042384)	ENSMNEG00000014529	GVQW3 (ENSMNEG00000035110)	ENSMNEG00000025096	EMSY (ENSMNEG00000041511)	LRRC32 (ENSMNEG00000041843)	TSKU (ENSMNEG00000013194)	ACER3 (ENSMNEG00000030819)	B3GNT6 (ENSMNEG00000035934)	CAPN5 (ENSMNEG00000037879)	MYO7A (ENSMNEG00000030597)	GDPD4 (ENSMNEG00000038159)	ENSMNEG00000028157	PAK1 (ENSMNEG00000044840)	AQP11 (ENSMNEG00000044078) #22	CLNS1A (ENSMNEG00000036050) #23	RSF1 (ENSMNEG00000043815) #24	AAMDC (ENSMNEG00000029653) #25	INTS4 (ENSMNEG00000044252) #28	KCTD14 (ENSMNEG00000042231) #29	NDUFC2 (ENSMNEG00000027120) #31	ALG8 (ENSMNEG00000033047) #32	KCTD21 (ENSMNEG00000009764) #33	USP35 (ENSMNEG00000040956)	GAB2 (ENSMNEG00000040872)	NARS2 (ENSMNEG00000036144)	ENSMNEG00000033890	TENM4 (ENSMNEG00000042610)	FAM181B (ENSMNEG00000003392)	PRCP (ENSMNEG00000029822)
Cercopithecinae_b	ANCESTRAL SPECIES	32	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234566.e.b.b.a
Olive baboon	MODERN SPECIES	3	WNT11 (ENSPANG00000014353)	ENSPANG00000003101	ENSPANG00000007883	EMSY (ENSPANG00000007638)	LRRC32 (ENSPANG00000015382)	ENSPANG00000049669	TSKU (ENSPANG00000018404)	ENSPANG00000046867	ACER3 (ENSPANG00000024908)	B3GNT6 (ENSPANG00000006331)	ENSPANG00000050104	CAPN5 (ENSPANG00000010115)	MYO7A (ENSPANG00000008342)	GDPD4 (ENSPANG00000011944)	PAK1 (ENSPANG00000018291)	AQP11 (ENSPANG00000014352) #22	CLNS1A (ENSPANG00000019127) #23	RSF1 (ENSPANG00000017793) #24	AAMDC (ENSPANG00000016126) #25	INTS4 (ENSPANG00000016287) #28	KCTD14 (ENSPANG00000032429) #29	THRSP (ENSPANG00000039953)	NDUFC2 (ENSPANG00000004040) #31	ALG8 (ENSPANG00000014351) #32	ENSPANG00000012861	KCTD21 (ENSPANG00000043382) #33	USP35 (ENSPANG00000006477)	GAB2 (ENSPANG00000014350)	NARS2 (ENSPANG00000025887)	ENSPANG00000011885	ENSPANG00000044910
Cercopithecinae_d	ANCESTRAL SPECIES	27	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.y.a.d	ENSGT00440000033232.d	ENSGT00910000147490	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000013354.d.a.b.a.a.a	ENSGT01030000234566.e.b.b.a	ENSGT00390000011376.e.b
Drill	MODERN SPECIES	1018										ACER3 (ENSMLEG00000027480)	CAPN5 (ENSMLEG00000043868)	MYO7A (ENSMLEG00000000314)	GDPD4 (ENSMLEG00000044208)	ENSMLEG00000039171	PAK1 (ENSMLEG00000033376)	AQP11 (ENSMLEG00000028777) #22	CLNS1A (ENSMLEG00000040581) #23	RSF1 (ENSMLEG00000038363) #24	AAMDC (ENSMLEG00000040894) #25	INTS4 (ENSMLEG00000040512) #28	KCTD14 (ENSMLEG00000030473) #29	NDUFC2 (ENSMLEG00000039299) #31	ALG8 (ENSMLEG00000025271) #32	ENSMLEG00000026673	KCTD21 (ENSMLEG00000019386) #33	USP35 (ENSMLEG00000038344)	GAB2 (ENSMLEG00000038890)	NARS2 (ENSMLEG00000029559)	ENSMLEG00000037365	TENM4 (ENSMLEG00000034676)	ENSMLEG00000040137
Sooty mangabey	MODERN SPECIES	545	UVRAG (ENSCATG00000039451)	WNT11 (ENSCATG00000035881)	THAP12 (ENSCATG00000024587)	GVQW3 (ENSCATG00000035253)	ENSCATG00000006180	EMSY (ENSCATG00000033145)	LRRC32 (ENSCATG00000039757)	TSKU (ENSCATG00000018628)	ACER3 (ENSCATG00000024996)	B3GNT6 (ENSCATG00000031669)	CAPN5 (ENSCATG00000044156)	MYO7A (ENSCATG00000037969)	GDPD4 (ENSCATG00000038800)	ENSCATG00000032730	PAK1 (ENSCATG00000032259)	AQP11 (ENSCATG00000012294) #22	CLNS1A (ENSCATG00000043634) #23	RSF1 (ENSCATG00000041020) #24	AAMDC (ENSCATG00000032345) #25	INTS4 (ENSCATG00000039621) #28	KCTD14 (ENSCATG00000007749) #29	NDUFC2 (ENSCATG00000039655) #31	ALG8 (ENSCATG00000044265) #32	KCTD21 (ENSCATG00000007922) #33	USP35 (ENSCATG00000034027)	GAB2 (ENSCATG00000034189)	NARS2 (ENSCATG00000031854)	ENSCATG00000044075	TENM4 (ENSCATG00000045269)	ENSCATG00000045182	FAM181B (ENSCATG00000005538)
Rhinopithecus	ANCESTRAL SPECIES	63	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00390000001136	ENSGT00390000007753.a	ENSGT00940000153986.b.a	ENSGT00940000156318	ENSGT00940000156359	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT01100000263497.A	ENSGT00940000156562	ENSGT00530000063405.a	ENSGT00940000153498.A	ENSGT00940000158149	ENSGT00390000011249	ENSGT00390000011698.c.a.c.b	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.q.a #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00390000013354.d.a.b.a.a.a
Golden snub-nosed monkey	MODERN SPECIES	1247													GDPD4 (ENSRROG00000023992)	ENSRROG00000036425	PAK1 (ENSRROG00000045159)	AQP11 (ENSRROG00000044105) #22	ENSRROG00000044618 #23	RSF1 (ENSRROG00000041658) #24	AAMDC (ENSRROG00000038727) #25	INTS4 (ENSRROG00000033522) #28	KCTD14 (ENSRROG00000030587) #29	ENSRROG00000003031	THRSP (ENSRROG00000011313)	NDUFC2 (ENSRROG00000028423) #31	ALG8 (ENSRROG00000037352) #32	KCTD21 (ENSRROG00000015553) #33	USP35 (ENSRROG00000015796)	GAB2 (ENSRROG00000037838)	ENSRROG00000029807	NARS2 (ENSRROG00000044898)	ENSRROG00000033701
Black snub-nosed monkey	MODERN SPECIES	1148						TSKU (ENSRBIG00000019981)	ACER3 (ENSRBIG00000037201)	ENSRBIG00000018440	ENSRBIG00000036893	B3GNT6 (ENSRBIG00000039681)	CAPN5 (ENSRBIG00000041321)	MYO7A (ENSRBIG00000036813)	GDPD4 (ENSRBIG00000037924)	ENSRBIG00000036379	PAK1 (ENSRBIG00000034335)	AQP11 (ENSRBIG00000013902) #22	ENSRBIG00000035450 #23	RSF1 (ENSRBIG00000043374) #24	AAMDC (ENSRBIG00000044663) #25	INTS4 (ENSRBIG00000042236) #28	KCTD14 (ENSRBIG00000042721) #29	THRSP (ENSRBIG00000024986)	NDUFC2 (ENSRBIG00000009625) #31	ALG8 (ENSRBIG00000035473) #32	KCTD21 (ENSRBIG00000025743) #33	USP35 (ENSRBIG00000040631)	GAB2 (ENSRBIG00000031806)	NARS2 (ENSRBIG00000040493)	ENSRBIG00000043707
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Mouse lemur	MODERN SPECIES	27	MAP6 (ENSMICG00000015256)	MOGAT2 (ENSMICG00000015272)	DGAT2 (ENSMICG00000015277)	UVRAG (ENSMICG00000015281)	WNT11 (ENSMICG00000015306)	THAP12 (ENSMICG00000006139)	EMSY (ENSMICG00000006143)	LRRC32 (ENSMICG00000026468)	ACER3 (ENSMICG00000013908)	CAPN5 (ENSMICG00000013928)	MYO7A (ENSMICG00000013944)	GDPD4 (ENSMICG00000046391)	PAK1 (ENSMICG00000015365)	ENSMICG00000046772	ENSMICG00000037612	AQP11 (ENSMICG00000043193) #22	CLNS1A (ENSMICG00000047894) #23	RSF1 (ENSMICG00000014613) #24	ENSMICG00000027095	CCDC90B (ENSMICG00000038111)	ANKRD42 (ENSMICG00000009004)	PCF11 (ENSMICG00000008986)	RAB30 (ENSMICG00000012002)	DDIAS (ENSMICG00000033865)	PRCP (ENSMICG00000011983)	TENM4 (ENSMICG00000015118)	NARS2 (ENSMICG00000015093)	GAB2 (ENSMICG00000015054)	USP35 (ENSMICG00000038576)	KCTD21 (ENSMICG00000046215) #33	ALG8 (ENSMICG00000015000) #32
Lemuriformes_a	ANCESTRAL SPECIES	50	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.a	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Greater bamboo lemur	MODERN SPECIES	970								ENSPSMG00000012716	ACER3 (ENSPSMG00000012733)	B3GNT6 (ENSPSMG00000012738)	CAPN5 (ENSPSMG00000012780)	MYO7A (ENSPSMG00000012875)	GDPD4 (ENSPSMG00000012887)	ENSPSMG00000012895	PAK1 (ENSPSMG00000013092)	AQP11 (ENSPSMG00000013331) #22	CLNS1A (ENSPSMG00000013404) #23	RSF1 (ENSPSMG00000013477) #24	AAMDC (ENSPSMG00000013511) #25	INTS4 (ENSPSMG00000013557) #28	ENSPSMG00000013577	KCTD14 (ENSPSMG00000013579) #29	THRSP (ENSPSMG00000013585)	NDUFC2 (ENSPSMG00000013598) #31	ALG8 (ENSPSMG00000013689) #32	KCTD21 (ENSPSMG00000013751) #33	ENSPSMG00000013755	USP35 (ENSPSMG00000013781)	GAB2 (ENSPSMG00000013794)	NARS2 (ENSPSMG00000013898)	TENM4 (ENSPSMG00000014042)
Coquerels sifaka	MODERN SPECIES	485															ENSPCOG00000024013	AQP11 (ENSPCOG00000022144) #22	CLNS1A (ENSPCOG00000016901) #23	ENSPCOG00000022998	RSF1 (ENSPCOG00000023361) #24	AAMDC (ENSPCOG00000020838) #25	INTS4 (ENSPCOG00000021031) #28	ENSPCOG00000026697	KCTD14 (ENSPCOG00000024125) #29	NDUFC2 (ENSPCOG00000015100) #31	ALG8 (ENSPCOG00000002085) #32	ENSPCOG00000022629	KCTD21 (ENSPCOG00000007716) #33	USP35 (ENSPCOG00000019534)	GAB2 (ENSPCOG00000022417)	NARS2 (ENSPCOG00000025785)	ENSPCOG00000016755
Bushbaby	MODERN SPECIES	116	DGAT2 (ENSOGAG00000000330)	UVRAG (ENSOGAG00000025371)	WNT11 (ENSOGAG00000001568)	ENSOGAG00000001569	GVQW3 (ENSOGAG00000027877)	EMSY (ENSOGAG00000011434)	LRRC32 (ENSOGAG00000010967)	ENSOGAG00000029463	TSKU (ENSOGAG00000016850)	ACER3 (ENSOGAG00000016854)	B3GNT6 (ENSOGAG00000027236)	CAPN5 (ENSOGAG00000016859)	MYO7A (ENSOGAG00000016862)	GDPD4 (ENSOGAG00000016874)	PAK1 (ENSOGAG00000008289)	AQP11 (ENSOGAG00000009169) #22	CLNS1A (ENSOGAG00000009170) #23	RSF1 (ENSOGAG00000002473) #24	AAMDC (ENSOGAG00000008615) #25	INTS4 (ENSOGAG00000008618) #28	KCTD14 (ENSOGAG00000004626) #29	THRSP (ENSOGAG00000000005)	ENSOGAG00000005017 #31	ALG8 (ENSOGAG00000030703) #32	KCTD21 (ENSOGAG00000005206) #33	USP35 (ENSOGAG00000013098)	GAB2 (ENSOGAG00000013101)	NARS2 (ENSOGAG00000011914)	ENSOGAG00000031293	TENM4 (ENSOGAG00000011916)	ENSOGAG00000032633
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00530000063516.a.a.c.b	ENSGT00940000169601	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Glires	ANCESTRAL SPECIES	1	ENSGT00530000063516.a.a.c.b	ENSGT00940000169601	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Rodentia_B	ANCESTRAL SPECIES	33	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Myomorpha	ANCESTRAL SPECIES	13	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Muroidea	ANCESTRAL SPECIES	12	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Muroidea_A	ANCESTRAL SPECIES		ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Cricetidae	ANCESTRAL SPECIES	1	ENSGT01030000234582.f.a.b	ENSGT00390000012877.d	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958.b #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Cricetinae	ANCESTRAL SPECIES	15	ENSGT01030000234582.f.a.b	ENSGT00390000012877.d	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958.b #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692
Golden Hamster	MODERN SPECIES	660	Uvrag (ENSMAUG00000022039)	Wnt11 (ENSMAUG00000008427)	Thap12 (ENSMAUG00000000897)	ENSMAUG00000013228	Emsy (ENSMAUG00000017757)	ENSMAUG00000017794	Gucy2d (ENSMAUG00000010563)	Tsku (ENSMAUG00000014311)	Acer3 (ENSMAUG00000021627)	B3gnt6 (ENSMAUG00000016711)	Omp (ENSMAUG00000017325)	Capn5 (ENSMAUG00000017431)	Myo7a (ENSMAUG00000002971)	Gdpd4 (ENSMAUG00000014553)	Pak1 (ENSMAUG00000010646)	Aqp11 (ENSMAUG00000010913) #22	Clns1a (ENSMAUG00000019637) #23	Rsf1 (ENSMAUG00000009412) #24	Aamdc (ENSMAUG00000001048) #25	Ints4 (ENSMAUG00000007877) #28	Kctd14 (ENSMAUG00000015696) #29	Thrsp (ENSMAUG00000013848)	Ndufc2 (ENSMAUG00000009562) #31	Alg8 (ENSMAUG00000012899) #32	Usp35 (ENSMAUG00000003032)	ENSMAUG00000008257	Nars2 (ENSMAUG00000002138)	Tenm4 (ENSMAUG00000019277)	ENSMAUG00000019787	ENSMAUG00000020090	ENSMAUG00000017096
Chinese hamster chok1gshd	MODERN SPECIES	101	Mogat2 (ENSCGRG00001004764)	Dgat2 (ENSCGRG00001020895)	Uvrag (ENSCGRG00001006874)	Wnt11 (ENSCGRG00001022788)	Thap12 (ENSCGRG00001021774)	ENSCGRG00001019331	Lrrc32 (ENSCGRG00001007026)	Gucy2d (ENSCGRG00001012034)	Tsku (ENSCGRG00001012773)	ENSCGRG00001024060	Acer3 (ENSCGRG00001013571)	B3gnt6 (ENSCGRG00001000647)	Capn5 (ENSCGRG00001021666)	Myo7a (ENSCGRG00001014824)	Pak1 (ENSCGRG00001022975)	Aqp11 (ENSCGRG00001017793) #22	Clns1a (ENSCGRG00001015805) #23	Rsf1 (ENSCGRG00001008301) #24	Aamdc (ENSCGRG00001016432) #25	ENSCGRG00001012029	Ints4 (ENSCGRG00001017981) #28	ENSCGRG00001018658 #29	Thrsp (ENSCGRG00001006063)	Ndufc2 (ENSCGRG00001017125) #31	Alg8 (ENSCGRG00001012346) #32	Kctd21 (ENSCGRG00001007277) #33	Usp35 (ENSCGRG00001015950)	Gab2 (ENSCGRG00001012091)	Nars2 (ENSCGRG00001014939)	ENSCGRG00001010169	Tenm4 (ENSCGRG00001023459)
Cricetidae_B	ANCESTRAL SPECIES	26	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877.d	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00940000165195	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958.b #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Prairie vole	MODERN SPECIES	9	Mogat2 (ENSMOCG00000007716)	Dgat2 (ENSMOCG00000012378)	Uvrag (ENSMOCG00000016758)	Wnt11 (ENSMOCG00000021029)	Thap12 (ENSMOCG00000021908)	Emsy (ENSMOCG00000008098)	Lrrc32 (ENSMOCG00000017378)	Gucy2d (ENSMOCG00000003117)	Tsku (ENSMOCG00000007489)	Acer3 (ENSMOCG00000014380)	B3gnt6 (ENSMOCG00000010357)	Capn5 (ENSMOCG00000015250)	Myo7a (ENSMOCG00000009126)	Gdpd4 (ENSMOCG00000019089)	Pak1 (ENSMOCG00000012909)	Aqp11 (ENSMOCG00000015165) #22	ENSMOCG00000015937	Rsf1 (ENSMOCG00000018606) #24	Aamdc (ENSMOCG00000013242) #25	Ints4 (ENSMOCG00000015641) #28	Thrsp (ENSMOCG00000014398)	Ndufc2 (ENSMOCG00000014768) #31	Alg8 (ENSMOCG00000018035) #32	Kctd21 (ENSMOCG00000009332) #33	Usp35 (ENSMOCG00000015178)	Gab2 (ENSMOCG00000016973)	Nars2 (ENSMOCG00000004938)	Tenm4 (ENSMOCG00000007967)	ENSMOCG00000007773	Prss23 (ENSMOCG00000022033)	Me3 (ENSMOCG00000005796)
Northern American deer mouse	MODERN SPECIES		Thap12 (ENSPEMG00000013204)	Emsy (ENSPEMG00000023648)	Lrrc32 (ENSPEMG00000024699)	ENSPEMG00000026314	ENSPEMG00000028876	ENSPEMG00000024681	Tsku (ENSPEMG00000028771)	Acer3 (ENSPEMG00000020360)	ENSPEMG00000028950	B3gnt6 (ENSPEMG00000016161)	Capn5 (ENSPEMG00000008442)	Myo7a (ENSPEMG00000015770)	Gdpd4 (ENSPEMG00000017863)	Pak1 (ENSPEMG00000008661)	ENSPEMG00000026666	Aqp11 (ENSPEMG00000000856) #22	ENSPEMG00000030074	Clns1a (ENSPEMG00000009380) #23	Rsf1 (ENSPEMG00000014926) #24	ENSPEMG00000024853	Aamdc (ENSPEMG00000014432) #25	Kctd14 (ENSPEMG00000020478) #29	Thrsp (ENSPEMG00000020398)	Ndufc2 (ENSPEMG00000020962) #31	Alg8 (ENSPEMG00000020484) #32	Kctd21 (ENSPEMG00000024492) #33	ENSPEMG00000024646	Usp35 (ENSPEMG00000016188)	ENSPEMG00000018108	Nars2 (ENSPEMG00000012439)	Tenm4 (ENSPEMG00000020624)
Murinae	ANCESTRAL SPECIES		ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Mus	ANCESTRAL SPECIES		ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Mus_A	ANCESTRAL SPECIES	1	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Mus_B	ANCESTRAL SPECIES		ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Mouse	MODERN SPECIES	16	Dgat2 (ENSMUSG00000030747)	Uvrag (ENSMUSG00000035354)	Wnt11 (ENSMUSG00000015957)	Thap12 (ENSMUSG00000030753)	Emsy (ENSMUSG00000035401)	Lrrc32 (ENSMUSG00000090958)	Gucy2d (ENSMUSG00000074003)	Tsku (ENSMUSG00000049580)	Acer3 (ENSMUSG00000030760)	B3gnt6 (ENSMUSG00000074004)	Omp (ENSMUSG00000074006)	Capn5 (ENSMUSG00000035547)	Myo7a (ENSMUSG00000030761)	Gdpd4 (ENSMUSG00000035582)	Pak1 (ENSMUSG00000030774)	Aqp11 (ENSMUSG00000042797) #22	Clns1a (ENSMUSG00000025439) #23	Rsf1 (ENSMUSG00000035623) #24	Aamdc (ENSMUSG00000035642) #25	Ints4 (ENSMUSG00000025133) #28	Kctd14 (ENSMUSG00000051727) #29	Thrsp (ENSMUSG00000035686)	Ndufc2 (ENSMUSG00000030647) #31	Alg8 (ENSMUSG00000035704) #32	Kctd21 (ENSMUSG00000044952) #33	Usp35 (ENSMUSG00000035713)	Gab2 (ENSMUSG00000004508)	Nars2 (ENSMUSG00000018995)	Tenm4 (ENSMUSG00000048078)	Fam181b (ENSMUSG00000051515)	Prcp (ENSMUSG00000061119)
Mus_C	ANCESTRAL SPECIES	13	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00900000143755	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
spretus	MODERN SPECIES	16	Dgat2 (MGP_SPRETEiJ_G0031133)	Uvrag (MGP_SPRETEiJ_G0031132)	Wnt11 (MGP_SPRETEiJ_G0031131)	MGP_SPRETEiJ_G0031130	Emsy (MGP_SPRETEiJ_G0031129)	Lrrc32 (MGP_SPRETEiJ_G0031128)	Gucy2d (MGP_SPRETEiJ_G0031127)	Tsku (MGP_SPRETEiJ_G0031126)	Acer3 (MGP_SPRETEiJ_G0031125)	B3gnt6 (MGP_SPRETEiJ_G0031124)	Omp (MGP_SPRETEiJ_G0031123)	Capn5 (MGP_SPRETEiJ_G0031122)	Myo7a (MGP_SPRETEiJ_G0031121)	Gdpd4 (MGP_SPRETEiJ_G0031120)	Pak1 (MGP_SPRETEiJ_G0031119)	Aqp11 (MGP_SPRETEiJ_G0031118) #22	Clns1a (MGP_SPRETEiJ_G0031117) #23	Rsf1 (MGP_SPRETEiJ_G0031116) #24	Aamdc (MGP_SPRETEiJ_G0031115) #25	Ints4 (MGP_SPRETEiJ_G0031114) #28	MGP_SPRETEiJ_G0031113	Thrsp (MGP_SPRETEiJ_G0031112)	Ndufc2 (MGP_SPRETEiJ_G0031111) #31	Alg8 (MGP_SPRETEiJ_G0031110) #32	Kctd21 (MGP_SPRETEiJ_G0031109) #33	Usp35 (MGP_SPRETEiJ_G0031108)	Gab2 (MGP_SPRETEiJ_G0031107)	Nars2 (MGP_SPRETEiJ_G0031106)	Tenm4 (MGP_SPRETEiJ_G0031105)	Prcp (MGP_SPRETEiJ_G0031104)	Ddias (MGP_SPRETEiJ_G0031103)
Steppe mouse	MODERN SPECIES	3349	Wnt11 (ENSMSIG00000027102)	Thap12 (ENSMSIG00000027087)	Emsy (ENSMSIG00000026804)	ENSMSIG00000026793	Lrrc32 (ENSMSIG00000026734)	Gucy2d (ENSMSIG00000026666)	ENSMSIG00000026660	Tsku (ENSMSIG00000026651)	Acer3 (ENSMSIG00000026641)	B3gnt6 (ENSMSIG00000026629)	Capn5 (ENSMSIG00000026611)	Myo7a (ENSMSIG00000026065)	ENSMSIG00000026060	ENSMSIG00000025967	Pak1 (ENSMSIG00000025929)	Aqp11 (ENSMSIG00000025922) #22	Clns1a (ENSMSIG00000025912) #23	ENSMSIG00000025904	ENSMSIG00000025898	Rsf1 (ENSMSIG00000025856) #24	Aamdc (ENSMSIG00000025743) #25	Ints4 (ENSMSIG00000025677) #28	Kctd14 (ENSMSIG00000025623) #29
Ryukyu mouse	MODERN SPECIES	16	MGP_CAROLIEiJ_G0030023	Uvrag (MGP_CAROLIEiJ_G0030022)	Wnt11 (MGP_CAROLIEiJ_G0030021)	Thap12 (MGP_CAROLIEiJ_G0030020)	Emsy (MGP_CAROLIEiJ_G0030019)	Lrrc32 (MGP_CAROLIEiJ_G0030018)	Gucy2d (MGP_CAROLIEiJ_G0030017)	Tsku (MGP_CAROLIEiJ_G0030016)	Acer3 (MGP_CAROLIEiJ_G0030015)	B3gnt6 (MGP_CAROLIEiJ_G0030014)	Omp (MGP_CAROLIEiJ_G0030013)	Capn5 (MGP_CAROLIEiJ_G0030012)	Myo7a (MGP_CAROLIEiJ_G0030011)	Gdpd4 (MGP_CAROLIEiJ_G0030010)	Pak1 (MGP_CAROLIEiJ_G0030009)	Aqp11 (MGP_CAROLIEiJ_G0030008) #22	Clns1a (MGP_CAROLIEiJ_G0030007) #23	Rsf1 (MGP_CAROLIEiJ_G0030006) #24	Aamdc (MGP_CAROLIEiJ_G0030005) #25	Ints4 (MGP_CAROLIEiJ_G0030004) #28	MGP_CAROLIEiJ_G0030003	Thrsp (MGP_CAROLIEiJ_G0030002)	Ndufc2 (MGP_CAROLIEiJ_G0030001) #31	Alg8 (MGP_CAROLIEiJ_G0030000) #32	Kctd21 (MGP_CAROLIEiJ_G0029999) #33	Usp35 (MGP_CAROLIEiJ_G0029998)	Gab2 (MGP_CAROLIEiJ_G0029997)	Nars2 (MGP_CAROLIEiJ_G0029996)	Tenm4 (MGP_CAROLIEiJ_G0029995)	Prcp (MGP_CAROLIEiJ_G0029994)	Ddias (MGP_CAROLIEiJ_G0029993)
Shrew mouse	MODERN SPECIES		Dgat2 (MGP_PahariEiJ_G0013244)	Uvrag (MGP_PahariEiJ_G0013243)	Wnt11 (MGP_PahariEiJ_G0013242)	Thap12 (MGP_PahariEiJ_G0013241)	Emsy (MGP_PahariEiJ_G0013240)	Lrrc32 (MGP_PahariEiJ_G0013239)	Gucy2d (MGP_PahariEiJ_G0013238)	Tsku (MGP_PahariEiJ_G0013237)	Acer3 (MGP_PahariEiJ_G0013236)	B3gnt6 (MGP_PahariEiJ_G0013235)	Omp (MGP_PahariEiJ_G0013234)	Capn5 (MGP_PahariEiJ_G0013233)	Myo7a (MGP_PahariEiJ_G0013232)	Gdpd4 (MGP_PahariEiJ_G0013231)	Pak1 (MGP_PahariEiJ_G0013230)	Aqp11 (MGP_PahariEiJ_G0013229) #22	Clns1a (MGP_PahariEiJ_G0013228) #23	Rsf1 (MGP_PahariEiJ_G0013227) #24	Aamdc (MGP_PahariEiJ_G0013226) #25	Ints4 (MGP_PahariEiJ_G0013225) #28	MGP_PahariEiJ_G0013224 #29	Thrsp (MGP_PahariEiJ_G0013223)	Ndufc2 (MGP_PahariEiJ_G0013222) #31	Alg8 (MGP_PahariEiJ_G0013221) #32	Kctd21 (MGP_PahariEiJ_G0013220) #33	Usp35 (MGP_PahariEiJ_G0013219)	Gab2 (MGP_PahariEiJ_G0013218)	Nars2 (MGP_PahariEiJ_G0013217)	MGP_PahariEiJ_G0013216	Tenm4 (MGP_PahariEiJ_G0013215)	Prcp (MGP_PahariEiJ_G0013214)
Rat	MODERN SPECIES		Wnt11 (ENSRNOG00000015982)	Thap12 (ENSRNOG00000053923)	Emsy (ENSRNOG00000015560)	Lrrc32 (ENSRNOG00000015310)	Gucy2e (ENSRNOG00000015058)	Tsku (ENSRNOG00000027784)	ENSRNOG00000065313	Acer3 (ENSRNOG00000036866)	B3gnt6 (ENSRNOG00000014471)	Omp (ENSRNOG00000068492)	Capn5 (ENSRNOG00000014251)	Myo7a (ENSRNOG00000013641)	ENSRNOG00000064082	Gdpd4 (ENSRNOG00000028470)	Pak1 (ENSRNOG00000029784)	Aqp11 (ENSRNOG00000013358) #22	Clns1a (ENSRNOG00000012788) #23	Rsf1 (ENSRNOG00000024194) #24	Aamdc (ENSRNOG00000012584) #25	Ints4 (ENSRNOG00000012552) #28	Kctd14 (ENSRNOG00000012494) #29	Thrsp (ENSRNOG00000012404)	Ndufc2 (ENSRNOG00000012383) #31	Alg8 (ENSRNOG00000012292) #32	ENSRNOG00000071147	Kctd21 (ENSRNOG00000024793) #33	Usp35 (ENSRNOG00000024961)	Gab2 (ENSRNOG00000011882)	Nars2 (ENSRNOG00000011476)	Tenm4 (ENSRNOG00000011151)	Fam181b (ENSRNOG00000010763)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1254	Dgat2 (ENSNGAG00000012414)	Uvrag (ENSNGAG00000018199)	Wnt11 (ENSNGAG00000013425)	ENSNGAG00000013016	Emsy (ENSNGAG00000013674)	Lrrc32 (ENSNGAG00000010300)	Gucy2d (ENSNGAG00000020383)	Tsku (ENSNGAG00000015490)	Acer3 (ENSNGAG00000018623)	B3gnt6 (ENSNGAG00000014322)	Omp (ENSNGAG00000013730)	Capn5 (ENSNGAG00000015774)	Myo7a (ENSNGAG00000006076)	Gdpd4 (ENSNGAG00000008449)	Pak1 (ENSNGAG00000011050)	Aqp11 (ENSNGAG00000000912) #22	ENSNGAG00000019313	Rsf1 (ENSNGAG00000019337) #24	Aamdc (ENSNGAG00000005085) #25	Ints4 (ENSNGAG00000010580) #28	Kctd14 (ENSNGAG00000014816) #29	Thrsp (ENSNGAG00000012385)	Ndufc2 (ENSNGAG00000011240) #31	Alg8 (ENSNGAG00000020942) #32	ENSNGAG00000019156	Kctd21 (ENSNGAG00000018996) #33	Usp35 (ENSNGAG00000012907)	Gab2 (ENSNGAG00000001090)	Nars2 (ENSNGAG00000000914)	Tenm4 (ENSNGAG00000018298)	ENSNGAG00000005012
Lesser Egyptian jerboa	MODERN SPECIES	59	Map6 (ENSJJAG00000014715)	Mogat2 (ENSJJAG00000023310)	Dgat2 (ENSJJAG00000019379)	Uvrag (ENSJJAG00000004695)	Wnt11 (ENSJJAG00000014979)	ENSJJAG00000013737	Emsy (ENSJJAG00000022026)	Lrrc32 (ENSJJAG00000000443)	ENSJJAG00000022648	Tsku (ENSJJAG00000012703)	Acer3 (ENSJJAG00000016119)	Capn5 (ENSJJAG00000021999)	Myo7a (ENSJJAG00000013078)	Gdpd4 (ENSJJAG00000018120)	ENSJJAG00000013179	Aqp11 (ENSJJAG00000023969) #22	ENSJJAG00000006333	Rsf1 (ENSJJAG00000016956) #24	ENSJJAG00000011302 #25	Ints4 (ENSJJAG00000018661) #28	Kctd14 (ENSJJAG00000022138) #29	Ndufc2 (ENSJJAG00000014939) #31	Alg8 (ENSJJAG00000018486) #32	Usp35 (ENSJJAG00000013300)	Gab2 (ENSJJAG00000020223)	ENSJJAG00000011765	Nars2 (ENSJJAG00000015019)	Tenm4 (ENSJJAG00000011108)	Fzd1 (ENSJJAG00000012179)	ENSJJAG00000022231	ENSJJAG00000007047
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000019448	ENSHGLG00000046732	ENSHGLG00000040669	ENSHGLG00000046387	ENSHGLG00000043666	ENSHGLG00000007972	ENSHGLG00000017959	ACER3 (ENSHGLG00000010087)	ENSHGLG00000037392	OMP (ENSHGLG00000046318)	CAPN5 (ENSHGLG00000002816)	MYO7A (ENSHGLG00000011345)	GDPD4 (ENSHGLG00000003760)	ENSHGLG00000019999	PAK1 (ENSHGLG00000046220)	AQP11 (ENSHGLG00000003550) #22	ENSHGLG00000002326 #23	RSF1 (ENSHGLG00000002695) #24	AAMDC (ENSHGLG00000003585) #25	ENSHGLG00000005234 #28	ENSHGLG00000019142 #29	ENSHGLG00000041450 #29	ENSHGLG00000018875	THRSP (ENSHGLG00000013110)	NDUFC2 (ENSHGLG00000042879) #31	ALG8 (ENSHGLG00000019304) #32	KCTD21 (ENSHGLG00000032398) #33	USP35 (ENSHGLG00000019526)	GAB2 (ENSHGLG00000002641)	ENSHGLG00000003188	NARS2 (ENSHGLG00000003746)
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Guinea pig	MODERN SPECIES	40	MOGAT2 (ENSCPOG00000037142)	DGAT2 (ENSCPOG00000004409)	UVRAG (ENSCPOG00000010164)	WNT11 (ENSCPOG00000009182)	THAP12 (ENSCPOG00000013167)	EMSY (ENSCPOG00000010198)	LRRC32 (ENSCPOG00000004677)	ENSCPOG00000000712	TSKU (ENSCPOG00000036466)	ACER3 (ENSCPOG00000036907)	B3GNT6 (ENSCPOG00000040405)	CAPN5 (ENSCPOG00000004296)	MYO7A (ENSCPOG00000026904)	GDPD4 (ENSCPOG00000008503)	PAK1 (ENSCPOG00000000164)	AQP11 (ENSCPOG00000005258) #22	CLNS1A (ENSCPOG00000005260) #23	RSF1 (ENSCPOG00000005261) #24	AAMDC (ENSCPOG00000004417) #25	INTS4 (ENSCPOG00000012466) #28	KCTD14 (ENSCPOG00000037873) #29	THRSP (ENSCPOG00000012393)	NDUFC2 (ENSCPOG00000012395) #31	ALG8 (ENSCPOG00000012398) #32	KCTD21 (ENSCPOG00000000382) #33	USP35 (ENSCPOG00000021879)	GAB2 (ENSCPOG00000012380)	NARS2 (ENSCPOG00000002639)	TENM4 (ENSCPOG00000002931)	PRCP (ENSCPOG00000030619)	DDIAS (ENSCPOG00000013049)
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00390000014932
Long-tailed chinchilla	MODERN SPECIES	121	DGAT2 (ENSCLAG00000015138)	UVRAG (ENSCLAG00000016075)	WNT11 (ENSCLAG00000014333)	THAP12 (ENSCLAG00000014847)	EMSY (ENSCLAG00000015699)	LRRC32 (ENSCLAG00000016535)	ENSCLAG00000014932	TSKU (ENSCLAG00000016143)	ENSCLAG00000015013	ACER3 (ENSCLAG00000014899)	B3GNT6 (ENSCLAG00000018076)	CAPN5 (ENSCLAG00000016170)	MYO7A (ENSCLAG00000013818)	GDPD4 (ENSCLAG00000016359)	PAK1 (ENSCLAG00000013320)	AQP11 (ENSCLAG00000016580) #22	CLNS1A (ENSCLAG00000014638) #23	RSF1 (ENSCLAG00000014769) #24	AAMDC (ENSCLAG00000013898) #25	INTS4 (ENSCLAG00000015884) #28	NDUFC2 (ENSCLAG00000016641) #31	ALG8 (ENSCLAG00000014914) #32	ENSCLAG00000013655	KCTD21 (ENSCLAG00000015125) #33	USP35 (ENSCLAG00000015220)	GAB2 (ENSCLAG00000015175)	ENSCLAG00000013569	NARS2 (ENSCLAG00000012233)	TENM4 (ENSCLAG00000013721)	ENSCLAG00000015167	PRCP (ENSCLAG00000014395)
Degu	MODERN SPECIES	90	POLD3 (ENSODEG00000004735)	ENSODEG00000004965	ENSODEG00000019096	LIPT2 (ENSODEG00000004972)	KCNE3 (ENSODEG00000019113)	PGM2L1 (ENSODEG00000004995)	ACER3 (ENSODEG00000005051)	ENSODEG00000005063	ENSODEG00000005077	B3GNT6 (ENSODEG00000005108)	CAPN5 (ENSODEG00000005118)	MYO7A (ENSODEG00000004096)	GDPD4 (ENSODEG00000004342)	ENSODEG00000004389	PAK1 (ENSODEG00000004405)	AQP11 (ENSODEG00000004417) #22	ENSODEG00000004427 #23	RSF1 (ENSODEG00000004471) #24	AAMDC (ENSODEG00000004504) #25	INTS4 (ENSODEG00000004555) #28	ENSODEG00000004566	NDUFC2 (ENSODEG00000004580) #31	ALG8 (ENSODEG00000004601) #32	KCTD21 (ENSODEG00000004645) #33	USP35 (ENSODEG00000004671)	GAB2 (ENSODEG00000004754)	ENSODEG00000019084	NARS2 (ENSODEG00000004856)	TENM4 (ENSODEG00000004981)	ENSODEG00000019138	PRCP (ENSODEG00000003780)
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692
Marmotini	ANCESTRAL SPECIES	28	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.ab #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692
Marmotini_b	ANCESTRAL SPECIES	13	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.t	ENSGT00530000063516.a.a.d	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.ab.a #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692
Squirrel	DUPLICATION
Squirrel	MODERN SPECIES	98	DGAT2 (ENSSTOG00000012018)	UVRAG (ENSSTOG00000016316)	WNT11 (ENSSTOG00000029064)	EMSY (ENSSTOG00000001193)	ENSSTOG00000027244	LRRC32 (ENSSTOG00000007128)	ENSSTOG00000023620	TSKU (ENSSTOG00000021957)	ACER3 (ENSSTOG00000002656)	B3GNT6 (ENSSTOG00000027714)	CAPN5 (ENSSTOG00000022877)	MYO7A (ENSSTOG00000002703)	GDPD4 (ENSSTOG00000002750)	ENSSTOG00000034844	PAK1 (ENSSTOG00000012786)	ENSSTOG00000004006 #22	ENSSTOG00000027980 #23	ENSSTOG00000009982	RSF1 (ENSSTOG00000004021) #24	AAMDC (ENSSTOG00000012329) #25	INTS4 (ENSSTOG00000023096) #28	KCTD14 (ENSSTOG00000031614) #29	THRSP (ENSSTOG00000023796)	NDUFC2 (ENSSTOG00000008104) #31	ALG8 (ENSSTOG00000008108) #32	KCTD21 (ENSSTOG00000022775) #33	USP35 (ENSSTOG00000019692)	GAB2 (ENSSTOG00000003173)	NARS2 (ENSSTOG00000019758)	TENM4 (ENSSTOG00000020637)	ENSSTOG00000032215
Squirrel	MODERN SPECIES	321																ENSSTOG00000028170 #22	ZNF182 (ENSSTOG00000020030)	ENSSTOG00000006249	ENSSTOG00000034288	ENSSTOG00000015375	SLC38A5 (ENSSTOG00000001034)	FTSJ1 (ENSSTOG00000027717)	PORCN (ENSSTOG00000001047)	EBP (ENSSTOG00000001055)	TBC1D25 (ENSSTOG00000026006)	ENSSTOG00000027493	WDR13 (ENSSTOG00000014866)	WAS (ENSSTOG00000028043)	SUV39H1 (ENSSTOG00000015328)	GLOD5 (ENSSTOG00000014150)	GATA1 (ENSSTOG00000026993)
Arctic ground squirrel	MODERN SPECIES	48	WNT11 (ENSUPAG00010013326)	THAP12 (ENSUPAG00010013320)	ENSUPAG00010013311	GVQW3 (ENSUPAG00010013303)	EMSY (ENSUPAG00010013019)	ENSUPAG00010013002	LRRC32 (ENSUPAG00010012993)	ENSUPAG00010012917	TSKU (ENSUPAG00010012903)	B3GNT6 (ENSUPAG00010012889)	ACER3 (ENSUPAG00010012835)	CAPN5 (ENSUPAG00010012806)	MYO7A (ENSUPAG00010012134)	GDPD4 (ENSUPAG00010012115)	PAK1 (ENSUPAG00010012099)	AQP11 (ENSUPAG00010012087) #22	ENSUPAG00010012077 #23	RSF1 (ENSUPAG00010012048) #24	AAMDC (ENSUPAG00010012036) #25	INTS4 (ENSUPAG00010012011) #28	KCTD14 (ENSUPAG00010012000) #29	THRSP (ENSUPAG00010011995)	NDUFC2 (ENSUPAG00010011983) #31	ALG8 (ENSUPAG00010011952) #32	KCTD21 (ENSUPAG00010011947) #33	USP35 (ENSUPAG00010011912)	GAB2 (ENSUPAG00010011896)	NARS2 (ENSUPAG00010011853)	TENM4 (ENSUPAG00010011689)	FAM181B (ENSUPAG00010011665)	ENSUPAG00010011658
Alpin marmot	MODERN SPECIES	3	DGAT2 (ENSMMMG00000009694)	UVRAG (ENSMMMG00000009669)	WNT11 (ENSMMMG00000009631)	GVQW3 (ENSMMMG00000009582)	EMSY (ENSMMMG00000009455)	LRRC32 (ENSMMMG00000009408)	ENSMMMG00000009326	TSKU (ENSMMMG00000009316)	ACER3 (ENSMMMG00000009260)	B3GNT6 (ENSMMMG00000009247)	CAPN5 (ENSMMMG00000009202)	MYO7A (ENSMMMG00000008595)	GDPD4 (ENSMMMG00000008571)	ENSMMMG00000008545	PAK1 (ENSMMMG00000007056)	AQP11 (ENSMMMG00000007031) #22	CLNS1A (ENSMMMG00000007023) #23	RSF1 (ENSMMMG00000006970) #24	ENSMMMG00000006961 #25	INTS4 (ENSMMMG00000006934) #28	KCTD14 (ENSMMMG00000006927) #29	THRSP (ENSMMMG00000006924)	NDUFC2 (ENSMMMG00000006915) #31	ALG8 (ENSMMMG00000006888) #32	KCTD21 (ENSMMMG00000006872) #33	ENSMMMG00000006859	GAB2 (ENSMMMG00000006851)	ENSMMMG00000006848	NARS2 (ENSMMMG00000006830)	TENM4 (ENSMMMG00000006609)	ENSMMMG00000006557
Eurasian red squirrel	MODERN SPECIES	2	WNT11 (ENSSVLG00005022863)	THAP12 (ENSSVLG00005022917)	GVQW3 (ENSSVLG00005022970)	EMSY (ENSSVLG00005023093)	LRRC32 (ENSSVLG00005023371)	ENSSVLG00005023498	ENSSVLG00005023846	TSKU (ENSSVLG00005023871)	ACER3 (ENSSVLG00005023904)	B3GNT6 (ENSSVLG00005012209)	CAPN5 (ENSSVLG00005012247)	MYO7A (ENSSVLG00005012423)	GDPD4 (ENSSVLG00005013184)	ENSSVLG00005013294	PAK1 (ENSSVLG00005013431)	AQP11 (ENSSVLG00005013502) #22	CLNS1A (ENSSVLG00005013729) #23	RSF1 (ENSSVLG00005013858) #24	AAMDC (ENSSVLG00005013937) #25	INTS4 (ENSSVLG00005014058) #28	ENSSVLG00005014481	ENSSVLG00005014498 #29	THRSP (ENSSVLG00005014533)	NDUFC2 (ENSSVLG00005014553) #31	ALG8 (ENSSVLG00005014631) #32	KCTD21 (ENSSVLG00005014693) #33	USP35 (ENSSVLG00005014736)	GAB2 (ENSSVLG00005014816)	NARS2 (ENSSVLG00005014874)	ENSSVLG00005015001	TENM4 (ENSSVLG00005015124)
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692	ENSGT00940000158099
Pika	DUPLICATION
Pika	MODERN SPECIES	3715																ENSOPRG00000010526 #22
Pika	MODERN SPECIES	6036																ENSOPRG00000006182 #22
Rabbit	MODERN SPECIES		ENSOCUG00000035359	EMSY (ENSOCUG00000017880)	LRRC32 (ENSOCUG00000015394)	TSKU (ENSOCUG00000021411)	ACER3 (ENSOCUG00000021559)	B3GNT6 (ENSOCUG00000013809)	CAPN5 (ENSOCUG00000025830)	MYO7A (ENSOCUG00000023355)	ENSOCUG00000029270	ENSOCUG00000030870	ENSOCUG00000007181	PAK1 (ENSOCUG00000010538)	ENSOCUG00000009905	CLNS1A (ENSOCUG00000024393) #23	ENSOCUG00000020951	AQP11 (ENSOCUG00000003238) #22	RSF1 (ENSOCUG00000011923) #24	AAMDC (ENSOCUG00000025658) #25	INTS4 (ENSOCUG00000010638) #28	KCTD14 (ENSOCUG00000005742) #29	THRSP (ENSOCUG00000000957)	ALG8 (ENSOCUG00000011266) #32	KCTD21 (ENSOCUG00000027266) #33	ENSOCUG00000005752	USP35 (ENSOCUG00000021262)	GAB2 (ENSOCUG00000017463)	NARS2 (ENSOCUG00000017469)	TENM4 (ENSOCUG00000004686)	ENSOCUG00000021220	ENSOCUG00000035434	PRCP (ENSOCUG00000000526)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Eulipotyphla	ANCESTRAL SPECIES	813																ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24
Common shrew	MODERN SPECIES	5648																AQP11 (ENSSARG00000009449) #22	CLNS1A (ENSSARG00000009460) #23	RSF1 (ENSSARG00000009471) #24
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Suina	ANCESTRAL SPECIES	5	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128.n #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Pig	MODERN SPECIES	17	EMSY (ENSSSCG00000014868)	LRRC32 (ENSSSCG00000014869)	ENSSSCG00000055915	TSKU (ENSSSCG00000014871)	ENSSSCG00000014872	ACER3 (ENSSSCG00000032723)	ENSSSCG00000053515	B3GNT6 (ENSSSCG00000014874)	CAPN5 (ENSSSCG00000014875)	MYO7A (ENSSSCG00000014876)	ENSSSCG00000014877	ENSSSCG00000053774	ENSSSCG00000058608	ENSSSCG00000055558	PAK1 (ENSSSCG00000014878)	AQP11 (ENSSSCG00000014880) #22	CLNS1A (ENSSSCG00000014881) #23	RSF1 (ENSSSCG00000014882) #24	ENSSSCG00000037251 #25	ENSSSCG00000014884 #28	ENSSSCG00000031979 #29	THRSP (ENSSSCG00000033822)	NDUFC2 (ENSSSCG00000039494) #31	ALG8 (ENSSSCG00000014887) #32	KCTD21 (ENSSSCG00000033506) #33	ENSSSCG00000042960	USP35 (ENSSSCG00000014892)	GAB2 (ENSSSCG00000014891)	ENSSSCG00000048333	NARS2 (ENSSSCG00000014893)	TENM4 (ENSSSCG00000014894)
Chacoan peccary	MODERN SPECIES	32	UVRAG (ENSCWAG00000001705)	WNT11 (ENSCWAG00000001687)	THAP12 (ENSCWAG00000001677)	GVQW3 (ENSCWAG00000001671)	EMSY (ENSCWAG00000001547)	LRRC32 (ENSCWAG00000001490)	ENSCWAG00000001431	TSKU (ENSCWAG00000001407)	ACER3 (ENSCWAG00000001370)	B3GNT6 (ENSCWAG00000001354)	CAPN5 (ENSCWAG00000001339)	MYO7A (ENSCWAG00000001099)	ENSCWAG00000001004	ENSCWAG00000000976	PAK1 (ENSCWAG00000000943)	AQP11 (ENSCWAG00000000925) #22	CLNS1A (ENSCWAG00000000875) #23	RSF1 (ENSCWAG00000000803) #24	AAMDC (ENSCWAG00000000780) #25	INTS4 (ENSCWAG00000000693) #28	KCTD14 (ENSCWAG00000000654) #29	THRSP (ENSCWAG00000000643)	NDUFC2 (ENSCWAG00000000628) #31	ALG8 (ENSCWAG00000000606) #32	ENSCWAG00000000598	KCTD21 (ENSCWAG00000000591) #33	USP35 (ENSCWAG00000000554)	GAB2 (ENSCWAG00000000513)	NARS2 (ENSCWAG00000000469)	ENSCWAG00000000452	TENM4 (ENSCWAG00000000422)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Cetacea	ANCESTRAL SPECIES	4	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692	ENSGT00940000158099
Odontoceti	ANCESTRAL SPECIES	4	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692	ENSGT00940000158099
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958.i.a #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000010352.q #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198692	ENSGT00940000158099
Dolphin	MODERN SPECIES	2143																AQP11 (ENSTTRG00000007045) #22	CLNS1A (ENSTTRG00000007062) #23	RSF1 (ENSTTRG00000007090) #24	AAMDC (ENSTTRG00000007111) #25	INTS4 (ENSTTRG00000007121) #28	KCTD14 (ENSTTRG00000007151) #29	NDUFC2 (ENSTTRG00000007154) #31	ALG8 (ENSTTRG00000007158) #32
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958.i.a #25	ENSGT00390000010128 #28	ENSGT00940000168561	ENSGT00950000183087.A.b.b.j	ENSGT00940000160762 #29	ENSGT00390000010352.q #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01010000228968	ENSGT01030000234566.e.b.b.a
Vaquita	MODERN SPECIES	19	DGAT2 (ENSPSNG00000005697)	LSM4 (ENSPSNG00000005672)	UVRAG (ENSPSNG00000005649)	WNT11 (ENSPSNG00000005604)	ENSPSNG00000005572	GVQW3 (ENSPSNG00000005560)	EMSY (ENSPSNG00000005336)	LRRC32 (ENSPSNG00000005215)	ENSPSNG00000005198	ENSPSNG00000005176	TSKU (ENSPSNG00000005155)	ACER3 (ENSPSNG00000005102)	CAPN5 (ENSPSNG00000005069)	MYO7A (ENSPSNG00000004811)	PAK1 (ENSPSNG00000004688)	AQP11 (ENSPSNG00000004655) #22	CLNS1A (ENSPSNG00000004596) #23	RSF1 (ENSPSNG00000004527) #24	ENSPSNG00000004492	ENSPSNG00000004460 #25	ENSPSNG00000004436	INTS4 (ENSPSNG00000004296) #28	KCTD14 (ENSPSNG00000004214) #29	ENSPSNG00000004194 #31	ALG8 (ENSPSNG00000004160) #32	KCTD21 (ENSPSNG00000004126) #33	USP35 (ENSPSNG00000004108)	GAB2 (ENSPSNG00000004098)	NARS2 (ENSPSNG00000004074)	ENSPSNG00000004054	TENM4 (ENSPSNG00000004019)
Monodontidae	ANCESTRAL SPECIES	2	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00610000086173.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958.i.a #25	ENSGT00390000010128 #28	ENSGT00390000003860.cb.b	ENSGT00950000183087.A.b.b.j	ENSGT00940000160762 #29	ENSGT00390000010352.q #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01010000228968	ENSGT01030000234566.e.b.b.a
Narwhal	MODERN SPECIES	314	MOGAT2 (ENSMMNG00015019582)	DGAT2 (ENSMMNG00015019561)	LSM4 (ENSMMNG00015019548)	UVRAG (ENSMMNG00015019516)	WNT11 (ENSMMNG00015019462)	ENSMMNG00015019441	GVQW3 (ENSMMNG00015019432)	EMSY (ENSMMNG00015019155)	LRRC32 (ENSMMNG00015019035)	ENSMMNG00015019014	TSKU (ENSMMNG00015018998)	ACER3 (ENSMMNG00015018948)	CAPN5 (ENSMMNG00015018893)	MYO7A (ENSMMNG00015018569)	PAK1 (ENSMMNG00015018474)	AQP11 (ENSMMNG00015018453) #22	CLNS1A (ENSMMNG00015018424) #23	RSF1 (ENSMMNG00015018385) #24	ENSMMNG00015018363	ENSMMNG00015018333 #25	ENSMMNG00015018307	INTS4 (ENSMMNG00015018001) #28	KCTD14 (ENSMMNG00015017911) #29	ENSMMNG00015017877 #31	ALG8 (ENSMMNG00015017839) #32	KCTD21 (ENSMMNG00015017806) #33	USP35 (ENSMMNG00015017738)	GAB2 (ENSMMNG00015017697)	NARS2 (ENSMMNG00015017636)	ENSMMNG00015017594	TENM4 (ENSMMNG00015017559)
Beluga whale	MODERN SPECIES	2	MOGAT2 (ENSDLEG00000003103)	DGAT2 (ENSDLEG00000003119)	LSM4 (ENSDLEG00000003159)	WNT11 (ENSDLEG00000003165)	THAP12 (ENSDLEG00000003173)	GVQW3 (ENSDLEG00000003193)	EMSY (ENSDLEG00000003214)	LRRC32 (ENSDLEG00000003305)	ENSDLEG00000003313	ENSDLEG00000003321	TSKU (ENSDLEG00000003327)	ACER3 (ENSDLEG00000003334)	CAPN5 (ENSDLEG00000003342)	MYO7A (ENSDLEG00000003449)	PAK1 (ENSDLEG00000004277)	AQP11 (ENSDLEG00000004294) #22	CLNS1A (ENSDLEG00000004301) #23	RSF1 (ENSDLEG00000004307) #24	AAMDC (ENSDLEG00000004318) #25	INTS4 (ENSDLEG00000004326) #28	ENSDLEG00000004342	KCTD14 (ENSDLEG00000004354) #29	ENSDLEG00000004361 #31	ALG8 (ENSDLEG00000004365) #32	KCTD21 (ENSDLEG00000004374) #33	USP35 (ENSDLEG00000004381)	GAB2 (ENSDLEG00000004384)	NARS2 (ENSDLEG00000004391)	TENM4 (ENSDLEG00000004417)	ENSDLEG00000004540	FAM181B (ENSDLEG00000004553)
Sperm whale	MODERN SPECIES	7	MOGAT2 (ENSPCTG00005012047)	DGAT2 (ENSPCTG00005011874)	ENSPCTG00005011854	UVRAG (ENSPCTG00005011757)	WNT11 (ENSPCTG00005011701)	ENSPCTG00005011685	GVQW3 (ENSPCTG00005011668)	EMSY (ENSPCTG00005011180)	LRRC32 (ENSPCTG00005011094)	TSKU (ENSPCTG00005011078)	ACER3 (ENSPCTG00005010914)	CAPN5 (ENSPCTG00005010782)	MYO7A (ENSPCTG00005009160)	GDPD4 (ENSPCTG00005008885)	PAK1 (ENSPCTG00005008855)	AQP11 (ENSPCTG00005012243) #22	CLNS1A (ENSPCTG00005012102) #23	RSF1 (ENSPCTG00005012040) #24	ENSPCTG00005011994	ENSPCTG00005011852 #25	ENSPCTG00005011813	INTS4 (ENSPCTG00005011313) #28	KCTD14 (ENSPCTG00005011283) #29	NDUFC2 (ENSPCTG00005011217) #31	ALG8 (ENSPCTG00005011136) #32	KCTD21 (ENSPCTG00005011096) #33	USP35 (ENSPCTG00005010965)	GAB2 (ENSPCTG00005010907)	NARS2 (ENSPCTG00005010794)	TENM4 (ENSPCTG00005010687)	FAM181B (ENSPCTG00005010654)
Blue whale	MODERN SPECIES	19	MOGAT2 (ENSBMSG00010006441)	DGAT2 (ENSBMSG00010006424)	UVRAG (ENSBMSG00010006403)	WNT11 (ENSBMSG00010006371)	THAP12 (ENSBMSG00010006359)	GVQW3 (ENSBMSG00010006350)	EMSY (ENSBMSG00010005898)	LRRC32 (ENSBMSG00010005727)	ENSBMSG00010005705	TSKU (ENSBMSG00010005685)	ACER3 (ENSBMSG00010005659)	CAPN5 (ENSBMSG00010005617)	MYO7A (ENSBMSG00010005524)	GDPD4 (ENSBMSG00010005481)	PAK1 (ENSBMSG00010005469)	AQP11 (ENSBMSG00010005455) #22	CLNS1A (ENSBMSG00010005431) #23	RSF1 (ENSBMSG00010005407) #24	ENSBMSG00010005359 #25	INTS4 (ENSBMSG00010005324) #28	KCTD14 (ENSBMSG00010005287) #29	NDUFC2 (ENSBMSG00010005272) #31	ALG8 (ENSBMSG00010005254) #32	KCTD21 (ENSBMSG00010005236) #33	USP35 (ENSBMSG00010005214)	GAB2 (ENSBMSG00010005186)	NARS2 (ENSBMSG00010005167)	TENM4 (ENSBMSG00010005114)	ENSBMSG00010005082	FAM181B (ENSBMSG00010005075)	ENSBMSG00010005070
Pecora	ANCESTRAL SPECIES	13	ENSGT00940000156825	ENSGT00940000154963	ENSGT00810000125439.A	ENSGT00950000182989.D.a.a.g.b	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00940000156251.f.e.a	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Yarkand deer	MODERN SPECIES	11	NELL1 (ENSCHYG00000010475)	ENSCHYG00000010427	ANO5 (ENSCHYG00000009862)	SLC17A6 (ENSCHYG00000009689)	FANCF (ENSCHYG00000009636)	GAS2 (ENSCHYG00000009479)	ENSCHYG00000009425	CCDC179 (ENSCHYG00000009380)	ENSCHYG00000009355	ENSCHYG00000009321	ENSCHYG00000009185	ENSCHYG00000009058	ENSCHYG00000008843	ENSCHYG00000004057	PAK1 (ENSCHYG00000004009)	AQP11 (ENSCHYG00000003991) #22	CLNS1A (ENSCHYG00000003949) #23	RSF1 (ENSCHYG00000003899) #24	ENSCHYG00000003886 #25	ENSCHYG00000003859	INTS4 (ENSCHYG00000003807) #28	KCTD14 (ENSCHYG00000003792) #29	THRSP (ENSCHYG00000003785)	NDUFC2 (ENSCHYG00000003780) #31	ALG8 (ENSCHYG00000003751) #32	ENSCHYG00000003733	KCTD21 (ENSCHYG00000003720) #33	USP35 (ENSCHYG00000003699)	GAB2 (ENSCHYG00000003673)	ENSCHYG00000003661	NARS2 (ENSCHYG00000003592)
Percora_a	ANCESTRAL SPECIES	16	ENSGT00940000156825	ENSGT00940000154963	ENSGT00810000125439.A	ENSGT00950000182989.D.a.a.g.b	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00940000156251.f.e.a	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Siberian musk deer	MODERN SPECIES	113												GDPD4 (ENSMMSG00000005765)	PAK1 (ENSMMSG00000005702)	ENSMMSG00000005665	ENSMMSG00000005636	AQP11 (ENSMMSG00000005614) #22	ENSMMSG00000005371 #23	RSF1 (ENSMMSG00000005280) #24	AAMDC (ENSMMSG00000005194) #25	INTS4 (ENSMMSG00000004977) #28	KCTD14 (ENSMMSG00000004944) #29	THRSP (ENSMMSG00000004930)	NDUFC2 (ENSMMSG00000004904) #31	ALG8 (ENSMMSG00000004825) #32	ENSMMSG00000004807	KCTD21 (ENSMMSG00000004784) #33	USP35 (ENSMMSG00000004718)	GAB2 (ENSMMSG00000004659)	NARS2 (ENSMMSG00000004571)	TENM4 (ENSMMSG00000004524)	ENSMMSG00000004494
Bovidae	ANCESTRAL SPECIES	16	ENSGT00940000154963	ENSGT00810000125439.A.qc.a	ENSGT00810000125439.A.rc	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00940000156251.f.e.a	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00740000117054
Caprinae	ANCESTRAL SPECIES	29	ENSGT00940000156825	ENSGT00940000154963	ENSGT00810000125439.A.qc.a	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00940000156251.f.e.a	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00740000117054
Goat	MODERN SPECIES	21	NELL1 (ENSCHIG00000022956)	ANO5 (ENSCHIG00000009295)	SLC17A6 (ENSCHIG00000018728)	FANCF (ENSCHIG00000007412)	GAS2 (ENSCHIG00000024172)	SVIP (ENSCHIG00000018647)	ENSCHIG00000012126	ENSCHIG00000026019	ENSCHIG00000018981	ENSCHIG00000011542	ENSCHIG00000012289	ENSCHIG00000012938	PAK1 (ENSCHIG00000003071)	ENSCHIG00000020809	ENSCHIG00000008822	AQP11 (ENSCHIG00000013621) #22	CLNS1A (ENSCHIG00000022408) #23	ENSCHIG00000014742	RSF1 (ENSCHIG00000024983) #24	AAMDC (ENSCHIG00000016553) #25	INTS4 (ENSCHIG00000016677) #28	KCTD14 (ENSCHIG00000010510) #29	THRSP (ENSCHIG00000010391)	NDUFC2 (ENSCHIG00000024981) #31	ALG8 (ENSCHIG00000015388) #32	ENSCHIG00000012136	KCTD21 (ENSCHIG00000010283) #33	USP35 (ENSCHIG00000022000)	GAB2 (ENSCHIG00000017530)	NARS2 (ENSCHIG00000018475)	ENSCHIG00000017581
Rambouillet Sheep	MODERN SPECIES	13	ENSOARG00020025682	ENSOARG00020025676	ENSOARG00020025672	HTATIP2 (ENSOARG00020025666)	PRMT3 (ENSOARG00020025645)	SLC6A5 (ENSOARG00020025638)	NELL1 (ENSOARG00020025588)	ENSOARG00020025569	ENSOARG00020025562	LUZP2 (ENSOARG00020025537)	ENSOARG00020025509	ENSOARG00020025490	ENSOARG00020025417	PAK1 (ENSOARG00020025388)	ENSOARG00020025384	AQP11 (ENSOARG00020025375) #22	CLNS1A (ENSOARG00020025356) #23	ENSOARG00020025348	RSF1 (ENSOARG00020025337) #24	AAMDC (ENSOARG00020025329) #25	INTS4 (ENSOARG00020025265) #28	KCTD14 (ENSOARG00020025241) #29	THRSP (ENSOARG00020025234)	NDUFC2 (ENSOARG00020025217) #31	ALG8 (ENSOARG00020025204) #32	ENSOARG00020025198	ENSOARG00020025186	KCTD21 (ENSOARG00020025178) #33	USP35 (ENSOARG00020025158)	ENSOARG00020025150	GAB2 (ENSOARG00020025127)
Bovinae	ANCESTRAL SPECIES	27	ENSGT00940000156825	ENSGT00940000154963	ENSGT00810000125439.A.qc.a	ENSGT00810000125439.A.rc	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00390000002918.a.a.j.c.a	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
American bison	MODERN SPECIES	3238											ENSBBBG00000007625	ENSBBBG00000018916	ENSBBBG00000018951	PAK1 (ENSBBBG00000018980)	ENSBBBG00000018987	AQP11 (ENSBBBG00000018990) #22	CLNS1A (ENSBBBG00000019050) #23	ENSBBBG00000019059	RSF1 (ENSBBBG00000004893) #24	AAMDC (ENSBBBG00000004908) #25	ENSBBBG00000004915	INTS4 (ENSBBBG00000019159) #28	KCTD14 (ENSBBBG00000019169) #29	NDUFC2 (ENSBBBG00000019182) #31	ALG8 (ENSBBBG00000007272) #32	ENSBBBG00000004952	KCTD21 (ENSBBBG00000008170) #33	ENSBBBG00000019225	USP35 (ENSBBBG00000019234)	GAB2 (ENSBBBG00000004971)	NARS2 (ENSBBBG00000007100)
Bos	ANCESTRAL SPECIES	11	ENSGT00810000125439.A.qc.a	ENSGT00810000125439.A.rc	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755.e.a	ENSGT00940000155755.f	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00390000013180	ENSGT00390000007015.q.b	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00390000002918.a.a.j.c.a.a.a	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00740000117054
Bos_a	ANCESTRAL SPECIES	66											ENSGT00390000007015.q.b	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00740000117054	ENSGT01030000234566.e.b.b.a
Wild yak	MODERN SPECIES	2189																AQP11 (ENSBMUG00000012404) #22	CLNS1A (ENSBMUG00000012444) #23	RSF1 (ENSBMUG00000012481) #24	ENSBMUG00000012501	AAMDC (ENSBMUG00000012554) #25	INTS4 (ENSBMUG00000012608) #28	KCTD14 (ENSBMUG00000012629) #29	THRSP (ENSBMUG00000012634)	NDUFC2 (ENSBMUG00000012648) #31	ALG8 (ENSBMUG00000012690) #32
Domestic yak	MODERN SPECIES	21	OR10G6 (ENSBGRG00000024329)	OR10S1 (ENSBGRG00000024345)	ENSBGRG00000024364	ENSBGRG00000024380	OR8D4 (ENSBGRG00000017223)	ENSBGRG00000017237	ENSBGRG00000017300	ENSBGRG00000017317	ENSBGRG00000017480	ENSBGRG00000017635	ENSBGRG00000017741	ENSBGRG00000017769	ENSBGRG00000018068	PAK1 (ENSBGRG00000018531)	ENSBGRG00000018633	AQP11 (ENSBGRG00000018686) #22	CLNS1A (ENSBGRG00000018759) #23	RSF1 (ENSBGRG00000019124) #24	ENSBGRG00000019411	AAMDC (ENSBGRG00000019457) #25	INTS4 (ENSBGRG00000019630) #28	KCTD14 (ENSBGRG00000020044) #29	THRSP (ENSBGRG00000020064)	NDUFC2 (ENSBGRG00000020103) #31	ALG8 (ENSBGRG00000020232) #32	KCTD21 (ENSBGRG00000020357) #33	USP35 (ENSBGRG00000020391)	ENSBGRG00000020442	GAB2 (ENSBGRG00000020464)	NARS2 (ENSBGRG00000020539)	ENSBGRG00000020752
Bos_b	ANCESTRAL SPECIES	10	ENSGT00810000125439.A.qc.a	ENSGT00810000125439.A.rc	ENSGT00940000155692	ENSGT00940000155891	ENSGT00390000005623	ENSGT00940000155755.f	ENSGT00390000007067.c	ENSGT00660000097475	ENSGT00970000198347	ENSGT00390000013180	ENSGT00390000007015.q.b	ENSGT00940000156251.f.f	ENSGT00940000156251.e	ENSGT00950000182988.a.b.a	ENSGT00390000016904.a.b	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00390000002918.a.a.j.c.a.a.a	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00740000117054
Cow	MODERN SPECIES	21	PRMT3 (ENSBTAG00000013421)	SLC6A5 (ENSBTAG00000014300)	ENSBTAG00000048576	ENSBTAG00000050228	ANO5 (ENSBTAG00000019394)	SLC17A6 (ENSBTAG00000038347)	FANCF (ENSBTAG00000007230)	GAS2 (ENSBTAG00000021654)	ENSBTAG00000054222	ENSBTAG00000053211	LUZP2 (ENSBTAG00000001043)	ENSBTAG00000034536	ENSBTAG00000000886	PAK1 (ENSBTAG00000010191)	ENSBTAG00000009268	AQP11 (ENSBTAG00000019928) #22	CLNS1A (ENSBTAG00000019930) #23	ENSBTAG00000051290	ENSBTAG00000049245	RSF1 (ENSBTAG00000020268) #24	AAMDC (ENSBTAG00000017298) #25	INTS4 (ENSBTAG00000010505) #28	KCTD14 (ENSBTAG00000011668) #29	THRSP (ENSBTAG00000011666)	NDUFC2 (ENSBTAG00000018188) #31	ALG8 (ENSBTAG00000018192) #32	ENSBTAG00000045601	KCTD21 (ENSBTAG00000054429) #33	ENSBTAG00000051637	USP35 (ENSBTAG00000012944)	GAB2 (ENSBTAG00000002922)
Hybrid Bos Indicus	MODERN SPECIES	21	SLC6A5 (ENSBIXG00005006663)	NELL1 (ENSBIXG00005021911)	ANO5 (ENSBIXG00005021754)	SLC17A6 (ENSBIXG00005021666)	FANCF (ENSBIXG00005021632)	GAS2 (ENSBIXG00005021605)	ENSBIXG00005000008	CCDC179 (ENSBIXG00005021565)	ENSBIXG00005006604	LUZP2 (ENSBIXG00005003622)	ENSBIXG00005021330	ENSBIXG00005021308	ENSBIXG00005021277	PAK1 (ENSBIXG00005021064)	ENSBIXG00005021010	AQP11 (ENSBIXG00005020997) #22	CLNS1A (ENSBIXG00005020933) #23	RSF1 (ENSBIXG00005003521) #24	ENSBIXG00005020733	ENSBIXG00005007728	AAMDC (ENSBIXG00005020691) #25	INTS4 (ENSBIXG00005020611) #28	KCTD14 (ENSBIXG00005020393) #29	ENSBIXG00005020379 #31	THRSP (ENSBIXG00005020366)	ALG8 (ENSBIXG00005020344) #32	ENSBIXG00005007674	KCTD21 (ENSBIXG00005007835) #33	ENSBIXG00005003394	USP35 (ENSBIXG00005020250)	ENSBIXG00005020247
Camelidae	ANCESTRAL SPECIES	32	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.f	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000158099	ENSGT00390000014932
Alpaca	MODERN SPECIES	2232														ENSVPAG00000010388	PAK1 (ENSVPAG00000010389)	AQP11 (ENSVPAG00000010390) #22	CLNS1A (ENSVPAG00000010391) #23	RSF1 (ENSVPAG00000010392) #24	AAMDC (ENSVPAG00000010394) #25	INTS4 (ENSVPAG00000010395) #28
Arabian camel	MODERN SPECIES	1	UVRAG (ENSCDRG00005003820)	WNT11 (ENSCDRG00005003887)	THAP12 (ENSCDRG00005003929)	GVQW3 (ENSCDRG00005003950)	EMSY (ENSCDRG00005004068)	LRRC32 (ENSCDRG00005004741)	ENSCDRG00005004762	ENSCDRG00005004792	TSKU (ENSCDRG00005004808)	ACER3 (ENSCDRG00005004836)	B3GNT6 (ENSCDRG00005004982)	CAPN5 (ENSCDRG00005005010)	MYO7A (ENSCDRG00005005065)	GDPD4 (ENSCDRG00005005146)	PAK1 (ENSCDRG00005005198)	AQP11 (ENSCDRG00005005237) #22	CLNS1A (ENSCDRG00005005266) #23	RSF1 (ENSCDRG00005005378) #24	AAMDC (ENSCDRG00005005416) #25	INTS4 (ENSCDRG00005005479) #28	KCTD14 (ENSCDRG00005005593) #29	THRSP (ENSCDRG00005005606)	NDUFC2 (ENSCDRG00005005626) #31	ALG8 (ENSCDRG00005005652) #32	KCTD21 (ENSCDRG00005005709) #33	USP35 (ENSCDRG00005005740)	GAB2 (ENSCDRG00005005876)	NARS2 (ENSCDRG00005005899)	TENM4 (ENSCDRG00005005968)	PRCP (ENSCDRG00005000165)	DDIAS (ENSCDRG00005000219)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Carnivora	ANCESTRAL SPECIES	21	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Caniformia	ANCESTRAL SPECIES	17	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.c.b #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Canidae	ANCESTRAL SPECIES	17	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00550000074832.ab	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.c.a #23	ENSGT00390000010063.c.b #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128.o #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00550000074832.ab	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.c.a #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128.o #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00390000003682.v	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Dog	MODERN SPECIES	13	THAP12 (ENSCAFG00845010711)	GVQW3 (ENSCAFG00845010675)	LRRC32 (ENSCAFG00845010636)	ENSCAFG00845010608	ENSCAFG00845010588	ENSCAFG00845010554	TSKU (ENSCAFG00845010425)	ENSCAFG00845010388	ACER3 (ENSCAFG00845010185)	B3GNT6 (ENSCAFG00845010131)	CAPN5 (ENSCAFG00845010073)	MYO7A (ENSCAFG00845009933)	GDPD4 (ENSCAFG00845009487)	ENSCAFG00845009261	PAK1 (ENSCAFG00845009162)	AQP11 (ENSCAFG00845009094) #22	CLNS1A (ENSCAFG00845009011) #23	AAMDC (ENSCAFG00845008924) #25	ENSCAFG00845008643 #28	THRSP (ENSCAFG00845008564)	NDUFC2 (ENSCAFG00845008528) #31	ENSCAFG00845008468	ALG8 (ENSCAFG00845008295) #32	ENSCAFG00845008222	KCTD21 (ENSCAFG00845008208) #33	USP35 (ENSCAFG00845008133)	GAB2 (ENSCAFG00845007967)	NARS2 (ENSCAFG00845007387)	TENM4 (ENSCAFG00845006537)	ENSCAFG00845006195	ENSCAFG00845012280
Dingo	MODERN SPECIES	245	THAP12 (ENSCAFG00020001916)	GVQW3 (ENSCAFG00020001914)	EMSY (ENSCAFG00020001634)	LRRC32 (ENSCAFG00020001532)	ENSCAFG00020001515	ENSCAFG00020001492	TSKU (ENSCAFG00020001488)	ENSCAFG00020001463	ACER3 (ENSCAFG00020001459)	B3GNT6 (ENSCAFG00020001446)	CAPN5 (ENSCAFG00020001423)	MYO7A (ENSCAFG00020001093)	GDPD4 (ENSCAFG00020001036)	PAK1 (ENSCAFG00020001022)	ENSCAFG00020001015	AQP11 (ENSCAFG00020001010) #22	ENSCAFG00020000978 #23	RSF1 (ENSCAFG00020000720) #24	AAMDC (ENSCAFG00020000697) #25	ENSCAFG00020000588 #28	KCTD14 (ENSCAFG00020000578) #29	THRSP (ENSCAFG00020000573)	NDUFC2 (ENSCAFG00020000561) #31	ENSCAFG00020000537	ALG8 (ENSCAFG00020000527) #32	ENSCAFG00020000514	KCTD21 (ENSCAFG00020000509) #33	USP35 (ENSCAFG00020000434)	GAB2 (ENSCAFG00020000415)	NARS2 (ENSCAFG00020000396)	TENM4 (ENSCAFG00020000281)
Red fox	MODERN SPECIES	81	THAP12 (ENSVVUG00000024332)	GVQW3 (ENSVVUG00000024331)	EMSY (ENSVVUG00000024307)	ENSVVUG00000024300	LRRC32 (ENSVVUG00000024297)	ENSVVUG00000024295	ENSVVUG00000024288	TSKU (ENSVVUG00000024274)	ENSVVUG00000024265	ACER3 (ENSVVUG00000024261)	ENSVVUG00000024257	CAPN5 (ENSVVUG00000024255)	MYO7A (ENSVVUG00000023681)	GDPD4 (ENSVVUG00000023559)	PAK1 (ENSVVUG00000023555)	AQP11 (ENSVVUG00000023552) #22	CLNS1A (ENSVVUG00000023537) #23	RSF1 (ENSVVUG00000023532) #24	AAMDC (ENSVVUG00000023530) #25	ENSVVUG00000022914 #28	KCTD14 (ENSVVUG00000022877) #29	THRSP (ENSVVUG00000022874)	NDUFC2 (ENSVVUG00000022872) #31	ENSVVUG00000022871	ALG8 (ENSVVUG00000022867) #32	ENSVVUG00000022864	KCTD21 (ENSVVUG00000022861) #33	USP35 (ENSVVUG00000022858)	GAB2 (ENSVVUG00000022852)	NARS2 (ENSVVUG00000022842)	TENM4 (ENSVVUG00000017164)
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.c.b #23	ENSGT00530000064411 #24	ENSGT00940000166485.a	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Mustelinae	ANCESTRAL SPECIES	25	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251.h.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063.c.b #23	ENSGT00530000064411 #24	ENSGT00940000166485.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
American mink	MODERN SPECIES	6	WNT11 (ENSNVIG00000000391)	ENSNVIG00000000416	GVQW3 (ENSNVIG00000000425)	EMSY (ENSNVIG00000000431)	LRRC32 (ENSNVIG00000000538)	ENSNVIG00000000546	ENSNVIG00000000562	ENSNVIG00000000591	TSKU (ENSNVIG00000000600)	ACER3 (ENSNVIG00000000606)	ENSNVIG00000000632	CAPN5 (ENSNVIG00000000641)	MYO7A (ENSNVIG00000000684)	ENSNVIG00000000803	PAK1 (ENSNVIG00000000824)	AQP11 (ENSNVIG00000000855) #22	ENSNVIG00000000865	RSF1 (ENSNVIG00000000888) #24	ENSNVIG00000000909	ENSNVIG00000000917 #25	INTS4 (ENSNVIG00000000934) #28	KCTD14 (ENSNVIG00000000969) #29	THRSP (ENSNVIG00000000973)	NDUFC2 (ENSNVIG00000000977) #31	ALG8 (ENSNVIG00000001004) #32	KCD21 (ENSNVIG00000001036) #33	ENSNVIG00000001038	USP35 (ENSNVIG00000001044)	GAB2 (ENSNVIG00000001084)	SYNM (ENSNVIG00000001138)	TENM4 (ENSNVIG00000001212)
Ferret	MODERN SPECIES	537														ENSMPUG00000015954	PAK1 (ENSMPUG00000015949)	AQP11 (ENSMPUG00000015947) #22	CLNS1A (ENSMPUG00000015944) #23	RSF1 (ENSMPUG00000015940) #24	AAMDC (ENSMPUG00000015932) #25	INTS4 (ENSMPUG00000015931) #28
Ursidae	ANCESTRAL SPECIES	15	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00940000165195	ENSGT00530000064411 #24	ENSGT00940000166485.a	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Ursus	ANCESTRAL SPECIES	36	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00940000165195	ENSGT00530000064411 #24	ENSGT00940000166485.a	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
American black bear	MODERN SPECIES	7422																AQP11 (ENSUAMG00000001926) #22	ENSUAMG00000001920	RSF1 (ENSUAMG00000001900) #24
Polar bear	MODERN SPECIES	302	SERPINH1 (ENSUMAG00000010838)	MOGAT2 (ENSUMAG00000010842)	DGAT2 (ENSUMAG00000010859)	UVRAG (ENSUMAG00000010891)	ENSUMAG00000010943	GVQW3 (ENSUMAG00000010946)	EMSY (ENSUMAG00000010950)	ENSUMAG00000010963	ENSUMAG00000010965	ENSUMAG00000010978	ACER3 (ENSUMAG00000010990)	CAPN5 (ENSUMAG00000011009)	MYO7A (ENSUMAG00000011108)	GDPD4 (ENSUMAG00000011316)	PAK1 (ENSUMAG00000011349)	AQP11 (ENSUMAG00000011361) #22	ENSUMAG00000011366	RSF1 (ENSUMAG00000011375) #24	ENSUMAG00000011381	AAMDC (ENSUMAG00000011384) #25	INTS4 (ENSUMAG00000011388) #28	KCTD14 (ENSUMAG00000011398) #29	THRSP (ENSUMAG00000011404)	ENSUMAG00000011409 #31	ENSUMAG00000011419 #32	ENSUMAG00000011427	KCTD21 (ENSUMAG00000011431) #33	ENSUMAG00000011439	GAB2 (ENSUMAG00000011445)	NARS2 (ENSUMAG00000011459)	TENM4 (ENSUMAG00000011476)
Giant Panda	MODERN SPECIES	18	DGAT2 (ENSAMEG00000016958)	UVRAG (ENSAMEG00000016944)	WNT11 (ENSAMEG00000016932)	THAP12 (ENSAMEG00000016926)	GVQW3 (ENSAMEG00000020284)	EMSY (ENSAMEG00000016911)	LRRC32 (ENSAMEG00000016910)	ENSAMEG00000016872	TSKU (ENSAMEG00000020283)	ACER3 (ENSAMEG00000009111)	B3GNT6 (ENSAMEG00000018928)	CAPN5 (ENSAMEG00000009127)	MYO7A (ENSAMEG00000009185)	GDPD4 (ENSAMEG00000005563)	PAK1 (ENSAMEG00000005584)	AQP11 (ENSAMEG00000005651) #22	ENSAMEG00000002097	ENSAMEG00000029619	RSF1 (ENSAMEG00000002111) #24	AAMDC (ENSAMEG00000002128) #25	INTS4 (ENSAMEG00000002133) #28	KCTD14 (ENSAMEG00000019889) #29	THRSP (ENSAMEG00000019892)	NDUFC2 (ENSAMEG00000025302) #31	ALG8 (ENSAMEG00000002183) #32	ENSAMEG00000029890	KCTD21 (ENSAMEG00000019900) #33	USP35 (ENSAMEG00000002210)	GAB2 (ENSAMEG00000028338)	TENM4 (ENSAMEG00000002255)	ENSAMEG00000025763
Felidae	ANCESTRAL SPECIES		ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01000000215318
Panthera	ANCESTRAL SPECIES	23	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01000000215318
Panthera_a	ANCESTRAL SPECIES	24	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01000000215318
lion	MODERN SPECIES	10	UVRAG (ENSPLOG00000005912)	WNT11 (ENSPLOG00000005866)	THAP12 (ENSPLOG00000005843)	GVQW3 (ENSPLOG00000005758)	EMSY (ENSPLOG00000005554)	LRRC32 (ENSPLOG00000005396)	ENSPLOG00000005376	ENSPLOG00000005358	ENSPLOG00000005339	TSKU (ENSPLOG00000005323)	ACER3 (ENSPLOG00000005289)	B3GNT6 (ENSPLOG00000005267)	CAPN5 (ENSPLOG00000005252)	MYO7A (ENSPLOG00000005121)	PAK1 (ENSPLOG00000004964)	AQP11 (ENSPLOG00000004938) #22	CLNS1A (ENSPLOG00000004913) #23	RSF1 (ENSPLOG00000021573) #24	AAMDC (ENSPLOG00000021529) #25	INTS4 (ENSPLOG00000021499) #28	KCTD14 (ENSPLOG00000021478) #29	THRSP (ENSPLOG00000021468)	ENSPLOG00000021443 #31	ALG8 (ENSPLOG00000021363) #32	ENSPLOG00000021312	ENSPLOG00000021291 #33	USP35 (ENSPLOG00000021253)	GAB2 (ENSPLOG00000021206)	NARS2 (ENSPLOG00000021176)	TENM4 (ENSPLOG00000021056)	ENSPLOG00000020966
leopard	MODERN SPECIES	17	UVRAG (ENSPPRG00000007658)	WNT11 (ENSPPRG00000006331)	THAP12 (ENSPPRG00000005378)	GVQW3 (ENSPPRG00000018362)	EMSY (ENSPPRG00000004765)	LRRC32 (ENSPPRG00000014260)	ENSPPRG00000013613	ENSPPRG00000012568	TSKU (ENSPPRG00000017969)	ACER3 (ENSPPRG00000011781)	B3GNT6 (ENSPPRG00000017917)	CAPN5 (ENSPPRG00000009255)	MYO7A (ENSPPRG00000008347)	GDPD4 (ENSPPRG00000023602)	PAK1 (ENSPPRG00000017647)	AQP11 (ENSPPRG00000012766) #22	CLNS1A (ENSPPRG00000012218) #23	RSF1 (ENSPPRG00000009730) #24	AAMDC (ENSPPRG00000008947) #25	INTS4 (ENSPPRG00000008445) #28	KCTD14 (ENSPPRG00000017268) #29	THRSP (ENSPPRG00000017258)	ENSPPRG00000007066 #31	ALG8 (ENSPPRG00000005691) #32	KCTD21 (ENSPPRG00000017214) #33	ENSPPRG00000017162	USP35 (ENSPPRG00000004495)	GAB2 (ENSPPRG00000004004)	ENSPPRG00000003277	NARS2 (ENSPPRG00000001838)	TENM4 (ENSPPRG00000001206)
Tiger	MODERN SPECIES	123			ENSPTIG00000018040	WNT11 (ENSPTIG00000018045)	THAP12 (ENSPTIG00000018125)	GVQW3 (ENSPTIG00000009766)	EMSY (ENSPTIG00000018392)	LRRC32 (ENSPTIG00000019326)	ENSPTIG00000019438	TSKU (ENSPTIG00000009783)	ACER3 (ENSPTIG00000019527)	CAPN5 (ENSPTIG00000019765)	MYO7A (ENSPTIG00000000193)	GDPD4 (ENSPTIG00000005676)	PAK1 (ENSPTIG00000006531)	AQP11 (ENSPTIG00000007423) #22	CLNS1A (ENSPTIG00000007611) #23	RSF1 (ENSPTIG00000007738) #24	AAMDC (ENSPTIG00000007970) #25	INTS4 (ENSPTIG00000008116) #28	KCTD14 (ENSPTIG00000009850) #29	THRSP (ENSPTIG00000009858)	ENSPTIG00000008425 #31	ALG8 (ENSPTIG00000008488) #32	KCTD21 (ENSPTIG00000009866) #33	ENSPTIG00000009874	USP35 (ENSPTIG00000008738)	GAB2 (ENSPTIG00000008792)	NARS2 (ENSPTIG00000008940)	ENSPTIG00000009402	PRCP (ENSPTIG00000009483)
Cat	MODERN SPECIES	241	DGAT2 (ENSFCAG00000040215)	UVRAG (ENSFCAG00000022180)	WNT11 (ENSFCAG00000025418)	THAP12 (ENSFCAG00000006764)	GVQW3 (ENSFCAG00000025300)	EMSY (ENSFCAG00000012003)	LRRC32 (ENSFCAG00000012007)	ENSFCAG00000025549	TSKU (ENSFCAG00000041968)	ACER3 (ENSFCAG00000031003)	B3GNT6 (ENSFCAG00000014442)	CAPN5 (ENSFCAG00000014444)	MYO7A (ENSFCAG00000014446)	GDPD4 (ENSFCAG00000004157)	PAK1 (ENSFCAG00000004158)	AQP11 (ENSFCAG00000007447) #22	CLNS1A (ENSFCAG00000026321) #23	RSF1 (ENSFCAG00000007449) #24	AAMDC (ENSFCAG00000007450) #25	INTS4 (ENSFCAG00000022698) #28	KCTD14 (ENSFCAG00000043035) #29	THRSP (ENSFCAG00000039734)	ENSFCAG00000029444 #31	ALG8 (ENSFCAG00000025308) #32	ENSFCAG00000034388	KCTD21 (ENSFCAG00000042697) #33	USP35 (ENSFCAG00000007458)	GAB2 (ENSFCAG00000007459)	NARS2 (ENSFCAG00000007984)	TENM4 (ENSFCAG00000004322)	ENSFCAG00000024747
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Chiroptera	ANCESTRAL SPECIES	5	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Microbat	MODERN SPECIES	1023						WNT11 (ENSMLUG00000016319)	ENSMLUG00000000564	EMSY (ENSMLUG00000012303)	LRRC32 (ENSMLUG00000010094)	ENSMLUG00000001171	TSKU (ENSMLUG00000001174)	CAPN5 (ENSMLUG00000001183)	MYO7A (ENSMLUG00000016621)	GDPD4 (ENSMLUG00000016657)	PAK1 (ENSMLUG00000013311)	AQP11 (ENSMLUG00000009739) #22	CLNS1A (ENSMLUG00000024623) #23	RSF1 (ENSMLUG00000005657) #24	ENSMLUG00000029974	AAMDC (ENSMLUG00000005674) #25	ENSMLUG00000025569	INTS4 (ENSMLUG00000005683) #28	KCTD14 (ENSMLUG00000014611) #29	THRSP (ENSMLUG00000014613)	ENSMLUG00000014617 #31	ALG8 (ENSMLUG00000014622) #32	KCTD21 (ENSMLUG00000014632) #33	USP35 (ENSMLUG00000015951)	GAB2 (ENSMLUG00000015964)	NARS2 (ENSMLUG00000030064)	TENM4 (ENSMLUG00000011352)
Greater horseshoe bat	MODERN SPECIES	2	DGAT2 (ENSRFEG00010018775)	UVRAG (ENSRFEG00010018929)	ENSRFEG00010019042	ENSRFEG00010019083	WNT11 (ENSRFEG00010019130)	THAP12 (ENSRFEG00010019170)	GVQW3 (ENSRFEG00010019199)	EMSY (ENSRFEG00010019268)	LRRC32 (ENSRFEG00010019506)	TSKU (ENSRFEG00010019575)	ACER3 (ENSRFEG00010019610)	CAPN5 (ENSRFEG00010019733)	MYO7A (ENSRFEG00010019800)	GDPD4 (ENSRFEG00010020561)	PAK1 (ENSRFEG00010020635)	AQP11 (ENSRFEG00010020682) #22	ENSRFEG00010020718 #23	RSF1 (ENSRFEG00010020771) #24	AAMDC (ENSRFEG00010020818) #25	INTS4 (ENSRFEG00010020849) #28	KCTD14 (ENSRFEG00010020932) #29	THRSP (ENSRFEG00010020945)	NDUFC2 (ENSRFEG00010020959) #31	ALG8 (ENSRFEG00010020987) #32	ENSRFEG00010021023	ENSRFEG00010021031 #33	USP35 (ENSRFEG00010021047)	GAB2 (ENSRFEG00010021071)	NARS2 (ENSRFEG00010021106)	ENSRFEG00010021143	TENM4 (ENSRFEG00010021157)
Megabat	MODERN SPECIES	2532																AQP11 (ENSPVAG00000013246) #22	CLNS1A (ENSPVAG00000013247) #23	RSF1 (ENSPVAG00000013248) #24	AAMDC (ENSPVAG00000013250) #25	INTS4 (ENSPVAG00000013251) #28	KCTD14 (ENSPVAG00000013253) #29	THRSP (ENSPVAG00000013256)	NDUFC2 (ENSPVAG00000013258) #31	ALG8 (ENSPVAG00000013259) #32	USP35 (ENSPVAG00000013261)	GAB2 (ENSPVAG00000013264)	NARS2 (ENSPVAG00000013265)
Equus	ANCESTRAL SPECIES	15	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00440000033232.d	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000163174	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00390000005673	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00980000198692
Horse	MODERN SPECIES	28	WNT11 (ENSECAG00000022188)	THAP12 (ENSECAG00000021982)	GVQW3 (ENSECAG00000046273)	EMSY (ENSECAG00000020064)	LRRC32 (ENSECAG00000019895)	ENSECAG00000038312	TSKU (ENSECAG00000005924)	ACER3 (ENSECAG00000026842)	B3GNT6 (ENSECAG00000019463)	OMP (ENSECAG00000057103)	CAPN5 (ENSECAG00000015125)	MYO7A (ENSECAG00000024143)	ENSECAG00000047740	GDPD4 (ENSECAG00000023157)	PAK1 (ENSECAG00000017840)	AQP11 (ENSECAG00000017607) #22	CLNS1A (ENSECAG00000015043) #23	ENSECAG00000045122	RSF1 (ENSECAG00000010685) #24	ENSECAG00000050740 #28	AAMDC (ENSECAG00000010625) #25	INTS4 (ENSECAG00000002281) #28	THRSP (ENSECAG00000055545)	NDUFC2 (ENSECAG00000039611) #31	ALG8 (ENSECAG00000022682) #32	KCTD21 (ENSECAG00000005835)	KCTD21 (ENSECAG00000038949) #33	USP35 (ENSECAG00000021733)	GAB2 (ENSECAG00000020164)	TENM4 (ENSECAG00000008038)	FAM181B (ENSECAG00000030706)
Donkey	MODERN SPECIES	12	UVRAG (ENSEASG00005014226)	WNT11 (ENSEASG00005014224)	THAP12 (ENSEASG00005014222)	GVQW3 (ENSEASG00005026325)	EMSY (ENSEASG00005014219)	LRRC32 (ENSEASG00005014217)	ENSEASG00005014216	TSKU (ENSEASG00005028507)	ENSEASG00005037031	ENSEASG00005014209	B3GNT6 (ENSEASG00005038371)	CAPN5 (ENSEASG00005014205)	MYO7A (ENSEASG00005013920)	ENSEASG00005013887	PAK1 (ENSEASG00005013886)	AQP11 (ENSEASG00005013884) #22	CLNS1A (ENSEASG00005013883) #23	RSF1 (ENSEASG00005013881) #24	AAMDC (ENSEASG00005013879) #25	INTS4 (ENSEASG00005013878) #28	KCTD14 (ENSEASG00005026841) #29	THRSP (ENSEASG00005035411)	NDUFC2 (ENSEASG00005013875) #31	ALG8 (ENSEASG00005013874) #32	ENSEASG00005013872	KCTD21 (ENSEASG00005026196) #33	USP35 (ENSEASG00005013870)	GAB2 (ENSEASG00005013868)	NARS2 (ENSEASG00005013867)	TENM4 (ENSEASG00005012922)	ENSEASG00005033750
Atlantogenata	ANCESTRAL SPECIES	35	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.c.b	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000158099	ENSGT00390000014932
Afrotheria	ANCESTRAL SPECIES	41	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.d	ENSGT00530000063516.a.a.c.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00940000163174	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000158099	ENSGT00390000014932
Afrotheria_a	ANCESTRAL SPECIES	120															ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000158099	ENSGT00390000014932
Elephant	MODERN SPECIES	486															PAK1 (ENSLAFG00000017795)	AQP11 (ENSLAFG00000003192) #22	CLNS1A (ENSLAFG00000003193) #23	RSF1 (ENSLAFG00000003194) #24	AAMDC (ENSLAFG00000000518) #25	INTS4 (ENSLAFG00000017400) #28	KCTD14 (ENSLAFG00000017412) #29	THRSP (ENSLAFG00000022714)	NDUFC2 (ENSLAFG00000001271) #31	ALG8 (ENSLAFG00000018266) #32	KCTD21 (ENSLAFG00000030533) #33	USP35 (ENSLAFG00000015007)	GAB2 (ENSLAFG00000015015)	NARS2 (ENSLAFG00000008484)	TENM4 (ENSLAFG00000007840)	ENSLAFG00000026823	PRCP (ENSLAFG00000008730)
Tenrec	MODERN SPECIES	7046																AQP11 (ENSETEG00000005257) #22	ENSETEG00000005260 #23	RSF1 (ENSETEG00000005263) #24
Xenarthra	ANCESTRAL SPECIES	746													ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25
Sloth	MODERN SPECIES	6396																AQP11 (ENSCHOG00000013193) #22
Armadillo	MODERN SPECIES	2306												MYO7A (ENSDNOG00000025971)	GDPD4 (ENSDNOG00000010411)	PAK1 (ENSDNOG00000012400)	RSF1 (ENSDNOG00000040916) #24	AQP11 (ENSDNOG00000009191) #22	CLNS1A (ENSDNOG00000040279) #23	AAMDC (ENSDNOG00000001246) #25	ENSDNOG00000035292	INTS4 (ENSDNOG00000016949) #28
Marsupialia	ANCESTRAL SPECIES	28	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Marsupialia_b	ANCESTRAL SPECIES	20	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Diprotodontia	ANCESTRAL SPECIES	24	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.e.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b
Diprotodontia_a	ANCESTRAL SPECIES	25	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a.e.a	ENSGT00390000009554	ENSGT00940000162288	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000160351.v
Common wonbat	MODERN SPECIES	342	DGAT2 (ENSVURG00010016956)	UVRAG (ENSVURG00010016946)	WNT11 (ENSVURG00010016934)	ENSVURG00010016929	ENSVURG00010016926	EMSY (ENSVURG00010016923)	LRRC32 (ENSVURG00010016917)	ENSVURG00010016875	ENSVURG00010016858	TSKU (ENSVURG00010016852)	ACER3 (ENSVURG00010016843)	CAPN5 (ENSVURG00010016832)	MYO7A (ENSVURG00010016744)	ENSVURG00010016729	PAK1 (ENSVURG00010016719)	AQP11 (ENSVURG00010016710) #22	CLNS1A (ENSVURG00010016703) #23	RSF1 (ENSVURG00010016689) #24	ENSVURG00010016678	AAMDC (ENSVURG00010016675) #25	INTS4 (ENSVURG00010016654) #28	KCTD14 (ENSVURG00010016638) #29	THRSP (ENSVURG00010016632)	NDUFC2 (ENSVURG00010016626) #31	ALG8 (ENSVURG00010016605) #32	KCTD21 (ENSVURG00010016589) #33	USP35 (ENSVURG00010016572)	GAB2 (ENSVURG00010016550)	NARS2 (ENSVURG00010016527)	ENSVURG00010016515	TENM4 (ENSVURG00010006937)
koala	MODERN SPECIES	35	DGAT2 (ENSPCIG00000009770)	UVRAG (ENSPCIG00000009778)	WNT11 (ENSPCIG00000011373)	ENSPCIG00000011379	ENSPCIG00000011376	EMSY (ENSPCIG00000011389)	LRRC32 (ENSPCIG00000011397)	ENSPCIG00000011400	TSKU (ENSPCIG00000011401)	ACER3 (ENSPCIG00000011402)	CAPN5 (ENSPCIG00000011406)	MYO7A (ENSPCIG00000011525)	ENSPCIG00000012712	ENSPCIG00000033835	ENSPCIG00000031577	AQP11 (ENSPCIG00000012721) #22	CLNS1A (ENSPCIG00000012722) #23	ENSPCIG00000036516	RSF1 (ENSPCIG00000032364) #24	AAMDC (ENSPCIG00000016695) #25	INTS4 (ENSPCIG00000016702) #28	THRSP (ENSPCIG00000016747)	ENSPCIG00000035362	NDUFC2 (ENSPCIG00000034850) #31	ALG8 (ENSPCIG00000016750) #32	ENSPCIG00000009182	KCTD21 (ENSPCIG00000009181) #33
Wallaby	MODERN SPECIES	8592																AQP11 (ENSMEUG00000004851) #22
Tasmanian devil	MODERN SPECIES	2	PAAF1 (ENSSHAG00000013811)	ENSSHAG00000025393	MRPL48 (ENSSHAG00000014091)	ENSSHAG00000022606	PLEKHB1 (ENSSHAG00000002591)	FAM168A (ENSSHAG00000005776)	RELT (ENSSHAG00000007388)	ENSSHAG00000008231	P2RY6 (ENSSHAG00000022365)	P2RY2 (ENSSHAG00000027090)	FCHSD2 (ENSSHAG00000000988)	ATG16L2 (ENSSHAG00000005731)	STARD10 (ENSSHAG00000032218)	ARAP1 (ENSSHAG00000007451)	ENSSHAG00000009267	AQP11 (ENSSHAG00000030748) #22	CLNS1A (ENSSHAG00000022356) #23	RSF1 (ENSSHAG00000011229) #24	INTS4 (ENSSHAG00000012263) #28	KCTD14 (ENSSHAG00000012725) #29	THRSP (ENSSHAG00000012966)	NDUFC2 (ENSSHAG00000026567) #31	ALG8 (ENSSHAG00000023559) #32	ENSSHAG00000023751	KCTD21 (ENSSHAG00000028062) #33	ENSSHAG00000021037	GAB2 (ENSSHAG00000018286)	NARS2 (ENSSHAG00000017901)	TENM4 (ENSSHAG00000017334)	ENSSHAG00000029669	PRCP (ENSSHAG00000018162)
Opossum	MODERN SPECIES	3	WNT11 (ENSMODG00000005538)	ENSMODG00000037256	THAP12 (ENSMODG00000005315)	ENSMODG00000027530	EMSY (ENSMODG00000005305)	LRRC32 (ENSMODG00000005278)	ENSMODG00000005266	TSKU (ENSMODG00000024044)	ENSMODG00000005223	ACER3 (ENSMODG00000005216)	CAPN5 (ENSMODG00000005198)	ENSMODG00000005168	ENSMODG00000043534	ENSMODG00000005090	PAK1 (ENSMODG00000005078)	ENSMODG00000005033 #22	ENSMODG00000005025 #23	RSF1 (ENSMODG00000004917) #24	ENSMODG00000048703	AAMDC (ENSMODG00000004901) #25	INTS4 (ENSMODG00000004889) #28	KCTD14 (ENSMODG00000049333) #29	THRSP (ENSMODG00000024057)	NDUFC2 (ENSMODG00000039255) #31	ALG8 (ENSMODG00000004770) #32	KCTD21 (ENSMODG00000024059) #33	USP35 (ENSMODG00000004750)	GAB2 (ENSMODG00000004729)	ENSMODG00000049406	ENSMODG00000039785	TENM4 (ENSMODG00000004667)
Platypus	MODERN SPECIES	12	MOGAT2 (ENSOANG00000009381)	DGAT2 (ENSOANG00000014557)	UVRAG (ENSOANG00000014556)	WNT11 (ENSOANG00000049556)	THAP12 (ENSOANG00000000831)	EMSY (ENSOANG00000013569)	LRRC32 (ENSOANG00000047117)	ENSOANG00000001116	ENSOANG00000040240	ACER3 (ENSOANG00000001122)	B3GNT6 (ENSOANG00000044430)	CAPN5 (ENSOANG00000041577)	MYO7A (ENSOANG00000030202)	ENSOANG00000009866	PAK1 (ENSOANG00000009867)	ENSOANG00000009868 #22	ENSOANG00000009523 #23	RSF1 (ENSOANG00000050976) #24	ENSOANG00000038615 #25	INTS4 (ENSOANG00000041934) #28	ENSOANG00000047225 #29	ENSOANG00000045583 #31	ENSOANG00000038394 #32	GAB2 (ENSOANG00000045791)	NARS2 (ENSOANG00000001381)	TENM4 (ENSOANG00000050564)	ENSOANG00000036733	PRCP (ENSOANG00000011106)	RAB30 (ENSOANG00000014498)	PCF11 (ENSOANG00000006552)	ANKRD42 (ENSOANG00000008014)
Sauria	ANCESTRAL SPECIES	2	ENSGT00940000162032	ENSGT00940000156796.l	ENSGT00940000161510	ENSGT00940000161326	ENSGT00610000086191	ENSGT00940000153761.A	ENSGT00940000159306	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b
Archelosauria	ANCESTRAL SPECIES		ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000161326	ENSGT00610000086191	ENSGT00940000153761.A	ENSGT00940000159306	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a
Archosauria	ANCESTRAL SPECIES	2	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000161326	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a
Aves	ANCESTRAL SPECIES	33	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a
Neognathae	ANCESTRAL SPECIES	1	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Galloanserae	ANCESTRAL SPECIES	1	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554.l	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c
Anatidae	ANCESTRAL SPECIES	64	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554.l	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.f	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c	ENSGT00390000004056
Pink-footed goose	MODERN SPECIES	81															PAK1 (ENSABRG00000004635)	AQP11 (ENSABRG00000004675) #22	CLNS1A (ENSABRG00000004719) #23	RSF1 (ENSABRG00000004729) #24	AAMDC (ENSABRG00000004768) #25	INTS4 (ENSABRG00000004795) #28	KCTD14 (ENSABRG00000004823) #29	ENSABRG00000004830	NDUFC2 (ENSABRG00000004836) #31	ALG8 (ENSABRG00000004842) #32	KCTD21 (ENSABRG00000004855) #33	USP35 (ENSABRG00000004859)	GAB2 (ENSABRG00000004871)	ENSABRG00000004892	TENM4 (ENSABRG00000004910)	ENSABRG00000005009	HIKESHI (ENSABRG00000005045)
Duck	MODERN SPECIES		DGAT2 (ENSAPLG00000011172)	UVRAG (ENSAPLG00000010570)	WNT11 (ENSAPLG00000010439)	THAP12 (ENSAPLG00000010379)	EMSY (ENSAPLG00000010078)	ENSAPLG00000009988	ENSAPLG00000009760	TSKU (ENSAPLG00000001790)	ACER3 (ENSAPLG00000009659)	CAPN5 (ENSAPLG00000009147)	OMP (ENSAPLG00000016937)	MYO7A (ENSAPLG00000007675)	GDPD4 (ENSAPLG00000007426)	ENSAPLG00000006771	ENSAPLG00000028244	AQP11 (ENSAPLG00000006765) #22	ENSAPLG00000006540	RSF1 (ENSAPLG00000018559) #24	AAMDC (ENSAPLG00000006327) #25	INTS4 (ENSAPLG00000006018) #28	ENSAPLG00000029259	KCTD14 (ENSAPLG00000001786) #29	ENSAPLG00000027987	ALG8 (ENSAPLG00000005720) #32	KCTD21 (ENSAPLG00000001767) #33	USP35 (ENSAPLG00000005646)	GAB2 (ENSAPLG00000005487)	NARS2 (ENSAPLG00000005256)	ENSAPLG00000024442	TENM4 (ENSAPLG00000004223)	ENSAPLG00000000696
Phasianidae	ANCESTRAL SPECIES		ENSGT00960000189458	ENSGT01030000234601.c.a.a.g.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554.k	ENSGT00390000009554.l	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352 #31	ENSGT00940000153733.A.c #32	ENSGT00940000160906 #33	ENSGT00940000160942.c	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c
Phasianidae_b	ANCESTRAL SPECIES		ENSGT01030000234601.c.a.a.g.a.b	ENSGT01030000234601.c.a.a.g.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554.k	ENSGT00390000009554.l	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352 #31	ENSGT00940000153733.A.c #32	ENSGT00940000160906 #33	ENSGT00940000160942.c	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c
Chicken	MODERN SPECIES		UVRAG (ENSGALG00010002368)	WNT11 (ENSGALG00010002356)	THAP12 (ENSGALG00010002348)	ENSGALG00010002328	ENSGALG00010003829	ENSGALG00010003822	ENSGALG00010002315	ENSGALG00010002312	ENSGALG00010002298	TSKU (ENSGALG00010002282)	ACER3 (ENSGALG00010002211)	CAPN5 (ENSGALG00010002160)	MYO7A (ENSGALG00010002138)	GDPD4 (ENSGALG00010002113)	PAK1 (ENSGALG00010002102)	AQP11 (ENSGALG00010002090) #22	CLNS1A (ENSGALG00010002065) #23	RSF1 (ENSGALG00010002054) #24	AAMDC (ENSGALG00010002039) #25	INTS4 (ENSGALG00010001997) #28	KCTD14 (ENSGALG00010001987) #29	THRSP (ENSGALG00010001976)	THRSPB (ENSGALG00010003522)	NDUFC2 (ENSGALG00010001957) #31	ALG8 (ENSGALG00010001938) #32	KCTD21 (ENSGALG00010001928) #33	USP35 (ENSGALG00010001911)	GAB2 (ENSGALG00010003818)	ENSGALG00010001905	NARS2 (ENSGALG00010001903)	TENM4 (ENSGALG00010009135)
Turkey	MODERN SPECIES		ENSMGAG00000015244	ENSMGAG00000018402	ENSMGAG00000015247	GAB2 (ENSMGAG00000015248)	ENSMGAG00000018248 #32	KCTD21 (ENSMGAG00000017260) #33	ENSMGAG00000015249 #32	ENSMGAG00000015250	ENSMGAG00000015251	ENSMGAG00000021463	AAMDC (ENSMGAG00000019319) #25	ENSMGAG00000015254 #28	KCTD14 (ENSMGAG00000015253) #29	ENSMGAG00000015252	ENSMGAG00000015257 #24	ENSMGAG00000015259 #22	ENSMGAG00000015258	ENSMGAG00000015260	ENSMGAG00000015261	ENSMGAG00000015262	ENSMGAG00000022413	ENSMGAG00000015263	ENSMGAG00000019989	ENSMGAG00000015640	ENSMGAG00000015265	ENSMGAG00000015318	ENSMGAG00000015267	ENSMGAG00000015268	ENSMGAG00000015269	ENSMGAG00000015272	ENSMGAG00000015273
Japanese quail	MODERN SPECIES		ENSCJPG00005005300	ENSCJPG00005005298	ENSCJPG00005005295	UVRAG (ENSCJPG00005005291)	WNT11 (ENSCJPG00005005289)	THAP12 (ENSCJPG00005005278)	EMSY (ENSCJPG00005005271)	ENSCJPG00005005269	ENSCJPG00005005254	TSKU (ENSCJPG00005005251)	ACER3 (ENSCJPG00005005247)	CAPN5 (ENSCJPG00005005240)	MYO7A (ENSCJPG00005004544)	GDPD4 (ENSCJPG00005004539)	PAK1 (ENSCJPG00005004534)	AQP11 (ENSCJPG00005004531) #22	CLNS1A (ENSCJPG00005004527) #23	RSF1 (ENSCJPG00005004525) #24	AAMDC (ENSCJPG00005004505) #25	INTS4 (ENSCJPG00005004504) #28	KCTD14 (ENSCJPG00005004503) #29	ENSCJPG00005004501	ENSCJPG00005004500	ENSCJPG00005004498	ENSCJPG00005004497	NDUFC2 (ENSCJPG00005004495) #31	ALG8 (ENSCJPG00005004492) #32	KCTD21 (ENSCJPG00005004491) #33	ENSCJPG00005004490	GAB2 (ENSCJPG00005004489)	NARS2 (ENSCJPG00005004456)
Neognathae_b	ANCESTRAL SPECIES		ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b.n.b.b	ENSGT00940000154904.b.n.b.a	ENSGT00940000158779	ENSGT00940000163623.f	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Great tit	MODERN SPECIES		KLRG1 (ENSPMJG00000003406)	ENSPMJG00000003393	ENSPMJG00000003387	ENSPMJG00000003383	ENSPMJG00000003369	ENSPMJG00000003305	ENSPMJG00000003300	ENSPMJG00000003275	TSKU (ENSPMJG00000003272)	ACER3 (ENSPMJG00000003270)	CAPN5 (ENSPMJG00000003043)	ENSPMJG00000003036	MYO7A (ENSPMJG00000002956)	GDPD4 (ENSPMJG00000002946)	PAK1 (ENSPMJG00000002892)	AQP11 (ENSPMJG00000002710) #22	CLNS1A (ENSPMJG00000002686) #23	RSF1 (ENSPMJG00000002677) #24	AAMDC (ENSPMJG00000002671) #25	INTS4 (ENSPMJG00000002654) #28	KCTD14 (ENSPMJG00000002652) #29	ENSPMJG00000002650	NDUFC2 (ENSPMJG00000002647) #31	ALG8 (ENSPMJG00000002636) #32	KCTD21 (ENSPMJG00000002622) #33	USP35 (ENSPMJG00000002606)	GAB2 (ENSPMJG00000002591)	NARS2 (ENSPMJG00000002370)	TENM4 (ENSPMJG00000002222)	ENSPMJG00000001878	HIKESHI (ENSPMJG00000001825)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b.n.b.b	ENSGT00940000154904.b.n.b.a.a	ENSGT00940000158779	ENSGT00940000163623.f	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Flycatcher	MODERN SPECIES		M6PR (ENSFALG00000027874)	KLRG1 (ENSFALG00000007361)	ENSFALG00000007366	ENSFALG00000007399	ENSFALG00000007470	ENSFALG00000007514	ENSFALG00000026315	ENSFALG00000007535	TSKU (ENSFALG00000014969)	ACER3 (ENSFALG00000007565)	ENSFALG00000025819	CAPN5 (ENSFALG00000007567)	MYO7A (ENSFALG00000007572)	GDPD4 (ENSFALG00000007587)	PAK1 (ENSFALG00000007597)	AQP11 (ENSFALG00000007604) #22	CLNS1A (ENSFALG00000024366) #23	RSF1 (ENSFALG00000007612) #24	AAMDC (ENSFALG00000027164) #25	INTS4 (ENSFALG00000007624) #28	KCTD14 (ENSFALG00000024292) #29	ENSFALG00000022877	ENSFALG00000015008	ENSFALG00000015022	ALG8 (ENSFALG00000007638) #32	KCTD21 (ENSFALG00000015047) #33	USP35 (ENSFALG00000007648)	GAB2 (ENSFALG00000007657)	NARS2 (ENSFALG00000026154)	TENM4 (ENSFALG00000007664)	ENSFALG00000026075
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b.n.b.b	ENSGT00940000154904.b.n.b.a.b	ENSGT00940000158779	ENSGT00940000163623.f	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a
Medium ground finch	MODERN SPECIES	147	ENSGFOG00000010872	ENSGFOG00000010866	ENSGFOG00000010860	ENSGFOG00000010844	ENSGFOG00000010833	ENSGFOG00000010799	ENSGFOG00000010760	ENSGFOG00000010750	ENSGFOG00000010720	TSKU (ENSGFOG00000010714)	ACER3 (ENSGFOG00000010704)	CAPN5 (ENSGFOG00000010685)	MYO7A (ENSGFOG00000010562)	GDPD4 (ENSGFOG00000010467)	PAK1 (ENSGFOG00000010446)	AQP11 (ENSGFOG00000010440) #22	ENSGFOG00000010436	RSF1 (ENSGFOG00000010427) #24	AAMDC (ENSGFOG00000010415) #25	INTS4 (ENSGFOG00000010406) #28	KCTD14 (ENSGFOG00000010398) #29	ENSGFOG00000010394
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00940000156612	ENSGT00390000002109	ENSGT00940000156296	ENSGT00940000154904.b.n.b.b	ENSGT00940000154904.b.n.b.a.b	ENSGT00940000158779	ENSGT00940000163623.f	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00390000004056	ENSGT00510000047334
Zebra finch	MODERN SPECIES		M6PR (ENSTGUG00000013099)	KLRG1 (ENSTGUG00000020922)	ENSTGUG00000013087	ENSTGUG00000013071	ENSTGUG00000013069	ENSTGUG00000018189	ENSTGUG00000022219	ENSTGUG00000013060	TSKU (ENSTGUG00000029224)	ACER3 (ENSTGUG00000024960)	CAPN5 (ENSTGUG00000013052)	OMP (ENSTGUG00000023275)	MYO7A (ENSTGUG00000013043)	GDPD4 (ENSTGUG00000013039)	PAK1 (ENSTGUG00000013034)	AQP11 (ENSTGUG00000013033) #22	CLNS1A (ENSTGUG00000013030) #23	RSF1 (ENSTGUG00000013027) #24	AAMDC (ENSTGUG00000013026) #25	INTS4 (ENSTGUG00000013020) #28	KCTD14 (ENSTGUG00000013019) #29	ENSTGUG00000013017	ENSTGUG00000020386	ENSTGUG00000027862	ENSTGUG00000020689	ENSTGUG00000022842	NDUFC2 (ENSTGUG00000022186) #31	ALG8 (ENSTGUG00000013014) #32	KCTD21 (ENSTGUG00000028148) #33	ENSTGUG00000021851	USP35 (ENSTGUG00000013010)
Common canary	MODERN SPECIES	4	KLRG1 (ENSSCAG00000000062)	ENSSCAG00000000092	ENSSCAG00000000331	ENSSCAG00000000358	ENSSCAG00000000438	ENSSCAG00000000463	ENSSCAG00000000480	TSKU (ENSSCAG00000000516)	ACER3 (ENSSCAG00000000529)	CAPN5 (ENSSCAG00000000537)	OMP (ENSSCAG00000000545)	MYO7A (ENSSCAG00000000597)	ENSSCAG00000001012	ENSSCAG00000001027	ENSSCAG00000001042	AQP11 (ENSSCAG00000001051) #22	ENSSCAG00000001060	RSF1 (ENSSCAG00000001065) #24	AAMDC (ENSSCAG00000001075) #25	INTS4 (ENSSCAG00000001084) #28	KCTD14 (ENSSCAG00000001102) #29	NDUFC2 (ENSSCAG00000001114) #31	ALG8 (ENSSCAG00000001149) #32	KCTD21 (ENSSCAG00000001228) #33	ENSSCAG00000001238	USP35 (ENSSCAG00000001248)	GAB2 (ENSSCAG00000001264)	NARS2 (ENSSCAG00000001306)	TENM4 (ENSSCAG00000001503)	HIKESHI (ENSSCAG00000001551)	EED (ENSSCAG00000001579)
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.f	ENSGT00500000044890.a.b.e	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c
Golden eagle	MODERN SPECIES	10	MOGAT2 (ENSACCG00020010260)	DGAT2 (ENSACCG00020010246)	UVRAG (ENSACCG00020010234)	WNT11 (ENSACCG00020010218)	THAP12 (ENSACCG00020010205)	EMSY (ENSACCG00020010145)	ENSACCG00020010032	ENSACCG00020010023	ENSACCG00020010011	TSKU (ENSACCG00020009994)	ACER3 (ENSACCG00020009979)	CAPN5 (ENSACCG00020009954)	MYO7A (ENSACCG00020009902)	GDPD4 (ENSACCG00020009848)	PAK1 (ENSACCG00020009813)	AQP11 (ENSACCG00020009797) #22	CLNS1A (ENSACCG00020009776) #23	RSF1 (ENSACCG00020009744) #24	AAMDC (ENSACCG00020009724) #25	INTS4 (ENSACCG00020009671) #28	KCTD14 (ENSACCG00020009629) #29	ENSACCG00020009616	ENSACCG00020009607	ENSACCG00020009591	NDUFC2 (ENSACCG00020009583) #31	ALG8 (ENSACCG00020009570) #32	KCTD21 (ENSACCG00020009555) #33	USP35 (ENSACCG00020009536)	GAB2 (ENSACCG00020009521)	NARS2 (ENSACCG00020009489)	TENM4 (ENSACCG00020009361)
Kakapo	MODERN SPECIES	11	DGAT2 (ENSSHBG00005019605)	UVRAG (ENSSHBG00005019598)	WNT11 (ENSSHBG00005019592)	THAP12 (ENSSHBG00005019587)	EMSY (ENSSHBG00005019574)	ENSSHBG00005019566	ENSSHBG00005019563	ENSSHBG00005019561	ENSSHBG00005019559	TSKU (ENSSHBG00005019555)	ACER3 (ENSSHBG00005019550)	CAPN5 (ENSSHBG00005019543)	MYO7A (ENSSHBG00005019272)	GDPD4 (ENSSHBG00005019210)	PAK1 (ENSSHBG00005019173)	AQP11 (ENSSHBG00005019160) #22	CLNS1A (ENSSHBG00005019157) #23	RSF1 (ENSSHBG00005019153) #24	AAMDC (ENSSHBG00005019150) #25	ENSSHBG00005019147 #28	KCTD14 (ENSSHBG00005019145) #29	ENSSHBG00005019143	ENSSHBG00005019141	NDUFC2 (ENSSHBG00005019140) #31	ALG8 (ENSSHBG00005019138) #32	KCTD21 (ENSSHBG00005019132) #33	USP35 (ENSSHBG00005019128)	GAB2 (ENSSHBG00005019121)	NARS2 (ENSSHBG00005019116)	TENM4 (ENSSHBG00005016336)	ENSSHBG00005016096
African ostrich	MODERN SPECIES	1067	UVRAG (ENSSCUG00000017535)	WNT11 (ENSSCUG00000017530)	THAP12 (ENSSCUG00000017528)	EMSY (ENSSCUG00000017525)	ENSSCUG00000017524	ENSSCUG00000017521	ENSSCUG00000017520	ENSSCUG00000017518	TSKU (ENSSCUG00000017517)	ENSSCUG00000017515	ACER3 (ENSSCUG00000017514)	CAPN5 (ENSSCUG00000017512)	MYO7A (ENSSCUG00000017496)	GDPD4 (ENSSCUG00000017489)	PAK1 (ENSSCUG00000017487)	AQP11 (ENSSCUG00000017480) #22	ENSSCUG00000017474	RSF1 (ENSSCUG00000017470) #24	AAMDC (ENSSCUG00000017468) #25	INTS4 (ENSSCUG00000017442) #28	KCTD14 (ENSSCUG00000017439) #29
Australian saltwater crocodile	MODERN SPECIES	27	ENSCPRG00005016765	UVRAG (ENSCPRG00005016749)	WNT11 (ENSCPRG00005016733)	THAP12 (ENSCPRG00005016723)	EMSY (ENSCPRG00005016708)	ENSCPRG00005016690	ENSCPRG00005016678	ENSCPRG00005016675	ENSCPRG00005016671	TSKU (ENSCPRG00005016664)	ACER3 (ENSCPRG00005016661)	OMP (ENSCPRG00005016654)	CAPN5 (ENSCPRG00005016650)	MYO7A (ENSCPRG00005016611)	PAK1 (ENSCPRG00005016581)	AQP11 (ENSCPRG00005016566) #22	CLNS1A (ENSCPRG00005016564) #23	RSF1 (ENSCPRG00005016559) #24	AAMDC (ENSCPRG00005016554) #25	INTS4 (ENSCPRG00005016547) #28	KCTD14 (ENSCPRG00005016541) #29	THRSP (ENSCPRG00005016537)	NDUFC2 (ENSCPRG00005016533) #31	ALG8 (ENSCPRG00005016526) #32	KCTD21 (ENSCPRG00005016523) #33	USP35 (ENSCPRG00005016511)	GAB2 (ENSCPRG00005016506)	NARS2 (ENSCPRG00005016483)	ENSCPRG00005016320	TENM4 (ENSCPRG00005016289)	ENSCPRG00005016261
Cryptodira	ANCESTRAL SPECIES		ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a.u	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c.c
Emydidae	ANCESTRAL SPECIES	19	ENSGT00940000161093	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a.u	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c.c
painted turtle	MODERN SPECIES	792	MAP6 (ENSCPBG00000027688)	MOGAT2 (ENSCPBG00000027691)	DGAT2 (ENSCPBG00000027699)	UVRAG (ENSCPBG00000027703)	WNT11 (ENSCPBG00000027708)	THAP12 (ENSCPBG00000027710)	EMSY (ENSCPBG00000027714)	ENSCPBG00000027719	TSKU (ENSCPBG00000027723)	ACER3 (ENSCPBG00000027726)	ENSCPBG00000027727	CAPN5 (ENSCPBG00000027729)	MYO7A (ENSCPBG00000027740)	GDPD4 (ENSCPBG00000027787)	PAK1 (ENSCPBG00000027789)	AQP11 (ENSCPBG00000027790) #22	CLNS1A (ENSCPBG00000027791) #23	RSF1 (ENSCPBG00000027792) #24	AAMDC (ENSCPBG00000027793) #25	INTS4 (ENSCPBG00000027794) #28	KCTD14 (ENSCPBG00000027796) #29	THRSP (ENSCPBG00000027797)	NDUFC2 (ENSCPBG00000027798) #31	ALG8 (ENSCPBG00000027799) #32	KCTD21 (ENSCPBG00000027801) #33	USP35 (ENSCPBG00000027802)	GAB2 (ENSCPBG00000027803)
Three-toed box turtle	MODERN SPECIES	2155																ENSTMTG00000018521 #22
Testudinidae	ANCESTRAL SPECIES		ENSGT01100000263559.B	ENSGT01060000248528.b.kh	ENSGT01100000263504.a.b.b.b.b	ENSGT01100000263474.a.b.b.j.b.b.b.a.b	ENSGT01100000263504.a.b.b.b.a.a	ENSGT01100000263474.a.b.b.k	ENSGT00940000153092.a.a	ENSGT01100000263559.A.f	ENSGT01060000248528.b.jh.a.b	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00390000009497	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a.u	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b	ENSGT01030000234566.e.b.b.a	ENSGT01100000263477.D.c.c
Goode s thornscrub tortoise	MODERN SPECIES		DGAT2 (ENSGEVG00005000559)	UVRAG (ENSGEVG00005000579)	WNT11 (ENSGEVG00005000625)	THAP12 (ENSGEVG00005000657)	EMSY (ENSGEVG00005000727)	ENSGEVG00005000778	ENSGEVG00005000789	TSKU (ENSGEVG00005000802)	ENSGEVG00005000810	ENSGEVG00005000823	ENSGEVG00005000839	CAPN5 (ENSGEVG00005000863)	MYO7A (ENSGEVG00005000901)	ENSGEVG00005000949	PAK1 (ENSGEVG00005001045)	AQP11 (ENSGEVG00005001145) #22	RSF1 (ENSGEVG00005001189) #24	AAMDC (ENSGEVG00005001244) #25	INTS4 (ENSGEVG00005001269) #28	KCTD14 (ENSGEVG00005001299) #29	THRSP (ENSGEVG00005001313)	NDUFC2 (ENSGEVG00005001319) #31	ALG8 (ENSGEVG00005001411) #32	ENSGEVG00005001605	KCTD21 (ENSGEVG00005001618) #33	USP35 (ENSGEVG00005001635)	GAB2 (ENSGEVG00005001656)	NARS2 (ENSGEVG00005001682)	ENSGEVG00005001716	TENM4 (ENSGEVG00005001737)	ENSGEVG00005001781
Abingdon island giant tortoise	MODERN SPECIES	2786													SLC30A1 (ENSCABG00000001652)	ENSCABG00000001651	ENSCABG00000001647	AQP11 (ENSCABG00000001641) #22	CLNS1A (ENSCABG00000001639) #23	RSF1 (ENSCABG00000001219) #24	AAMDC (ENSCABG00000001198) #25	INTS4 (ENSCABG00000000838) #28	KCTD14 (ENSCABG00000000823) #29	THRSP (ENSCABG00000000819)	NDUFC2 (ENSCABG00000000818) #31	ALG8 (ENSCABG00000000675) #32	KCTD21 (ENSCABG00000000667) #33
Chinese turtle	MODERN SPECIES	1765													GDPD4 (ENSPSIG00000005088)	ENSPSIG00000001404	PAK1 (ENSPSIG00000004781)	AQP11 (ENSPSIG00000004713) #22	CLNS1A (ENSPSIG00000004706) #23	RSF1 (ENSPSIG00000004628) #24	AAMDC (ENSPSIG00000004604) #25	INTS4 (ENSPSIG00000004261) #28	KCTD14 (ENSPSIG00000001388) #29	THRSP (ENSPSIG00000001362)	NDUFC2 (ENSPSIG00000004249) #31	ALG8 (ENSPSIG00000004217) #32	KCTD21 (ENSPSIG00000001339) #33	USP35 (ENSPSIG00000004110)	GAB2 (ENSPSIG00000003979)	NARS2 (ENSPSIG00000003892)	ENSPSIG00000003812	TENM4 (ENSPSIG00000003653)
Lepidosauria	ANCESTRAL SPECIES	17	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT00950000183127.b.h.a.b
Episquamata	ANCESTRAL SPECIES	2	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00990000211477	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Toxicofera	ANCESTRAL SPECIES	9				ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00390000009497	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00990000211477	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Elapidae	ANCESTRAL SPECIES	10															ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Elapidae_a	ANCESTRAL SPECIES	41															ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Blue-lipped sea krait	MODERN SPECIES	1976																AQP11 (ENSLLTG00000010639) #22	ENSLLTG00000010606
Acanthophiinae	ANCESTRAL SPECIES	42															ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00390000005673	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D
Eastern brown snake	MODERN SPECIES	33											WNT11 (ENSPTXG00000002528)	UVRAG (ENSPTXG00000002550)	DGAT2 (ENSPTXG00000003150)	MOGAT2 (ENSPTXG00000003154)	PAK1 (ENSPTXG00000003159)	AQP11 (ENSPTXG00000003161) #22	ENSPTXG00000003162	CLNS1A (ENSPTXG00000003163) #23	RSF1 (ENSPTXG00000003165) #24	AAMDC (ENSPTXG00000003168) #25	INTS4 (ENSPTXG00000003170) #28	KCTD14 (ENSPTXG00000003171) #29	ENSPTXG00000003172	ENSPTXG00000003173	ALG8 (ENSPTXG00000003175) #32	KCTD21 (ENSPTXG00000003177) #33	USP35 (ENSPTXG00000003178)	GAB2 (ENSPTXG00000003179)	NARS2 (ENSPTXG00000003181)	TENM4 (ENSPTXG00000003182)	ENSPTXG00000003184
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	547															ENSNSUG00000015868	ENSNSUG00000015869 #22	CLNS1A (ENSNSUG00000015870) #23	RSF1 (ENSNSUG00000015871) #24	ENSNSUG00000015872	AAMDC (ENSNSUG00000015873) #25	INTS4 (ENSNSUG00000015874) #28
Mainland tiger snake	MODERN SPECIES	1840																ENSNSUG00000005248 #22
Indian cobra	MODERN SPECIES	4	ENSNNAG00000007643	HPX (ENSNNAG00000007683)	TRIM3 (ENSNNAG00000007745)	ARFIP2 (ENSNNAG00000007774)	TIMM10B (ENSNNAG00000007814)	ENSNNAG00000007844	RRP8 (ENSNNAG00000007872)	ILK (ENSNNAG00000007912)	TAF10 (ENSNNAG00000007958)	TPP1 (ENSNNAG00000007995)	ENSNNAG00000008113	LCMT2 (ENSNNAG00000008289)	PGM2L1 (ENSNNAG00000008416)	ENSNNAG00000008441	MOGAT2 (ENSNNAG00000008472)	AQP11 (ENSNNAG00000008779) #22	CLNS1A (ENSNNAG00000008814) #23	WNT11 (ENSNNAG00000008841)	GDPD5 (ENSNNAG00000008885)	ENSNNAG00000008901
Lizard	MODERN SPECIES	951										ENSACAG00000002736	MYO7A (ENSACAG00000002274)	ENSACAG00000002220	ENSACAG00000040917	PAK1 (ENSACAG00000001968)	ENSACAG00000039546	AQP11 (ENSACAG00000022958) #22	ENSACAG00000001960	ENSACAG00000029679	ENSACAG00000035046 #23	RSF1 (ENSACAG00000001901) #24	AAMDC (ENSACAG00000001888) #25	INTS4 (ENSACAG00000001754) #28	KCTD14 (ENSACAG00000007126) #29	ENSACAG00000022766	ENSACAG00000036288	ENSACAG00000012500	ENSACAG00000039971 #31	ALG8 (ENSACAG00000012469) #32	KCTD21 (ENSACAG00000012466) #33	ENSACAG00000035907	ENSACAG00000012407
Laterata	ANCESTRAL SPECIES	3	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00530000063516.a.a	ENSGT00390000009554	ENSGT00940000163623	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00990000211477	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00500000044890.a.b.i	ENSGT00500000044890.a.b.j	ENSGT00390000010352 #31	ENSGT00940000153733.A #32	ENSGT00940000160906 #33	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a.n	ENSGT01100000263477.D.c.a.b
Argentine black and white tegu	MODERN SPECIES	24	ENSSMRG00000007053	WNT11 (ENSSMRG00000007054)	THAP12 (ENSSMRG00000007080)	EMSY (ENSSMRG00000007092)	ENSSMRG00000007124	ENSSMRG00000007128	ENSSMRG00000007152	TSKU (ENSSMRG00000007173)	ACER3 (ENSSMRG00000007174)	CAPN5 (ENSSMRG00000007186)	ENSSMRG00000007194	MYO7A (ENSSMRG00000007279)	GDPD4 (ENSSMRG00000007296)	PAK1 (ENSSMRG00000007311)	ENSSMRG00000007332	AQP11 (ENSSMRG00000007336) #22	CLNS1A (ENSSMRG00000007338) #23	RSF1 (ENSSMRG00000007345) #24	AAMDC (ENSSMRG00000007349) #25	INTS4 (ENSSMRG00000007351) #28	KCTD14 (ENSSMRG00000007360) #29	ENSSMRG00000007384	NDUFC2 (ENSSMRG00000007385) #31	ALG8 (ENSSMRG00000007393) #32	KCTD21 (ENSSMRG00000007395) #33	USP35 (ENSSMRG00000007396)	GAB2 (ENSSMRG00000007428)	TENM4 (ENSSMRG00000007475)	ENSSMRG00000007527	ENSSMRG00000007541	FAM181B (ENSSMRG00000007572)
tuatara	MODERN SPECIES	891											CAPN5 (ENSSPUG00000011865)	MYO7A (ENSSPUG00000011932)	GDPD4 (ENSSPUG00000012097)	ENSSPUG00000012120	ENSSPUG00000012143	AQP11 (ENSSPUG00000012154) #22	CLNS1A (ENSSPUG00000012157) #23	ENSSPUG00000012176 #24	ENSSPUG00000012237 #24	AAMDC (ENSSPUG00000012352) #25	INTS4 (ENSSPUG00000012396) #28	KCTD14 (ENSSPUG00000012507) #29	NDUFC2 (ENSSPUG00000012526) #31	ENSSPUG00000012542 #32	ENSSPUG00000012557 #32	USP35 (ENSSPUG00000012584)	GAB2 (ENSSPUG00000012624)	NARS2 (ENSSPUG00000012642)	ENSSPUG00000012680	TENM4 (ENSSPUG00000012736)
Anura	ANCESTRAL SPECIES	28	ENSGT00940000161093	ENSGT00530000063947.C	ENSGT01030000234582.e.b	ENSGT01030000234582.f.a.b	ENSGT00390000012877	ENSGT00940000158413	ENSGT00390000009554	ENSGT00940000163623.j	ENSGT00940000162702	ENSGT00940000160984	ENSGT00730000110920.a	ENSGT00940000156536	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00940000153733.A #32	ENSGT00940000160942	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000166008	ENSGT00940000156875	ENSGT00440000034259.b
Leishan spiny toad	MODERN SPECIES	5	KCTD14 (ENSLLEG00000004200) #29	TMEM135 (ENSLLEG00000004184)	ENSLLEG00000004175	FZD4 (ENSLLEG00000004168)	ENSLLEG00000004141	ME3 (ENSLLEG00000003909)	ENSLLEG00000003900	PRSS23 (ENSLLEG00000003893)	ENSLLEG00000003887	CCDC81 (ENSLLEG00000003829)	MOCS3 (ENSLLEG00000003803)	ENSLLEG00000003796	EED (ENSLLEG00000003752)	ENSLLEG00000003726	PICALM (ENSLLEG00000003542)	AQP11 (ENSLLEG00000003475) #22	CLNS1A (ENSLLEG00000003456) #23	ENSLLEG00000003432	RSF1 (ENSLLEG00000003406) #24	ENSLLEG00000003395 #25	ENSLLEG00000003345	ENSLLEG00000003335	ENSLLEG00000003327	NEU3 (ENSLLEG00000003294)	ENSLLEG00000003281	XRRA1 (ENSLLEG00000003211)	RNF169 (ENSLLEG00000003192)	ENSLLEG00000003139	CHRDL2 (ENSLLEG00000003113)	ENSLLEG00000003107	ENSLLEG00000003101
Frog	MODERN SPECIES	2	dgat2 (ENSXETG00000025317)	mogat2.2 (ENSXETG00000015062)	map6 (ENSXETG00000015061)	ENSXETG00000025318	ENSXETG00000044887	gdpd5 (ENSXETG00000015053)	ENSXETG00000036724	fchsd2 (ENSXETG00000010734)	ENSXETG00000010732	rps3 (ENSXETG00000010729)	ENSXETG00000010725	p2ry2 (ENSXETG00000039207)	myo7a (ENSXETG00000010706)	XB877238 [provisional:gdpd5] (ENSXETG00000046669)	pak1 (ENSXETG00000010703)	aqp11 (ENSXETG00000030889) #22	picalm (ENSXETG00000032563)	ENSXETG00000042352	CCDC83 (ENSXETG00000010700)	sytl2 (ENSXETG00000012793)	ENSXETG00000045431	CREBZF (ENSXETG00000037796)	tmem126a (ENSXETG00000012738)	ENSXETG00000038687	ENSXETG00000041747	ENSXETG00000045322	dlg2 (ENSXETG00000012737)	ccdc90b (ENSXETG00000013639)	ankrd42 (ENSXETG00000033972)	pcf11 (ENSXETG00000013634)	rab30 (ENSXETG00000013633)
Coelacanth	MODERN SPECIES	1526															pak1 (ENSLACG00000007848)	AQP11 (ENSLACG00000006500) #22	CLNS1A (ENSLACG00000005275) #23	RSF1 (ENSLACG00000002272) #24	AAMDC (ENSLACG00000001389) #25
Actinopterygii	ANCESTRAL SPECIES	5	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00940000159782	ENSGT00390000015655.a	ENSGT00940000165121	ENSGT00940000158132	ENSGT00390000018904	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497	ENSGT00940000156536.e.a	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.a	ENSGT00390000013989.b
Neopterygii	DUPLICATION
Neopterygii	ANCESTRAL SPECIES																	ENSGT00530000063816.c.a #22
Osteoglossocephalai	ANCESTRAL SPECIES	12	ENSGT01030000234886	ENSGT00940000155677.b	ENSGT00440000039469	ENSGT00390000004663	ENSGT00940000157765	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b
Clupeocephala	ANCESTRAL SPECIES	10	ENSGT00940000155677.b	ENSGT00440000039469	ENSGT00390000004663	ENSGT00940000157765	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b
Euteleosteomorpha	ANCESTRAL SPECIES	254	ENSGT00530000063405.b.f	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT01030000234886.e.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22
Acanthomorphata	ANCESTRAL SPECIES	14	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01030000234886.e.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c
Euacanthomorphacea	ANCESTRAL SPECIES	19	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01030000234886.e.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Percomorphaceae	ANCESTRAL SPECIES	40	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Eupercaria	ANCESTRAL SPECIES	26	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Tetraodontidae	ANCESTRAL SPECIES	57	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01090000260061.c.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b.j #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a
Fugu	MODERN SPECIES	6	ncam1a (ENSTRUG00000002966)	cadm1a (ENSTRUG00000012483)	sc5d (ENSTRUG00000012442)	ENSTRUG00000012392	TECTA (ENSTRUG00000012236)	ENSTRUG00000012109	ENSTRUG00000027293	CRK (ENSTRUG00000011971)	ywhae2 (ENSTRUG00000030321)	gria4b (ENSTRUG00000011517)	elmod1 (ENSTRUG00000011350)	slc35f2 (ENSTRUG00000011198)	cul5a (ENSTRUG00000010860)	CAPN5 (ENSTRUG00000010580)	ompb (ENSTRUG00000024676)	ENSTRUG00000010002 #22	ENSTRUG00000009902 #24	FCHSD2 (ENSTRUG00000009588)	foxred1 (ENSTRUG00000009457)	kcnj1b (ENSTRUG00000009385)	ENSTRUG00000009343	rabep1 (ENSTRUG00000009248)	mpzl1l (ENSTRUG00000009115)	ndfip1l (ENSTRUG00000008999)	endou2 (ENSTRUG00000008965)	rnf14 (ENSTRUG00000008815)	hspa4a (ENSTRUG00000008366)	zcchc10 (ENSTRUG00000023781)	AFF4 (ENSTRUG00000008087)	ENSTRUG00000020132	SOWAHA (ENSTRUG00000033404)
Eupecaria_A	ANCESTRAL SPECIES	25	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Ballan wrasse	MODERN SPECIES	273													CAPN5 (ENSLBEG00000025315)	MYO7A (ENSLBEG00000025398)	GDPD4 (ENSLBEG00000025490)	AQP11 (ENSLBEG00000025513) #22	ENSLBEG00000025539 #24	FCHSD2 (ENSLBEG00000025605)	ENSLBEG00000025639	foxred1 (ENSLBEG00000025655)	kcnj1b (ENSLBEG00000025676)	ENSLBEG00000025688	ENSLBEG00000025701	rabep1 (ENSLBEG00000025724)	mpzl1l (ENSLBEG00000025782)	ENSLBEG00000025799	emsy (ENSLBEG00000025814)	ENSLBEG00000025882	tlcd5b (ENSLBEG00000025986)	rcc1l (ENSLBEG00000026004)	castor2 (ENSLBEG00000026038)
Eupecaria_B	ANCESTRAL SPECIES	25	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Eupecaria_C	ANCESTRAL SPECIES	32	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Large yellow croaker	MODERN SPECIES	2	TBCEL (ENSLCRG00005004289)	TECTA (ENSLCRG00005004285)	ENSLCRG00005004282	ENSLCRG00005004280	ENSLCRG00005004279	CRK (ENSLCRG00005004276)	ywhae2 (ENSLCRG00005004273)	gria4b (ENSLCRG00005002153)	elmod1 (ENSLCRG00005002125)	slc35f2 (ENSLCRG00005002122)	CUL5 (ENSLCRG00005000547)	ompb (ENSLCRG00005000544)	CAPN5 (ENSLCRG00005000535)	MYO7A (ENSLCRG00005000522)	GDPD4 (ENSLCRG00005000515)	AQP11 (ENSLCRG00005000514) #22	ENSLCRG00005000510 #24	FCHSD2 (ENSLCRG00005000506)	foxred1 (ENSLCRG00005000484)	kcnj1b (ENSLCRG00005000480)	ENSLCRG00005000479	rabep1 (ENSLCRG00005000289)	ENSLCRG00005000220	mpzl1l (ENSLCRG00005000209)	ENSLCRG00005000201	emsy (ENSLCRG00005000172)	ENSLCRG00005000117	tlcd5b (ENSLCRG00005000100)	rcc1l (ENSLCRG00005000088)	castor2 (ENSLCRG00005015625)	DOC2B (ENSLCRG00005015574)
European seabass	MODERN SPECIES	4	ENSDLAG00005006899	ENSDLAG00005006884	ENSDLAG00005006871	ENSDLAG00005033831	ENSDLAG00005006495	ENSDLAG00005005016	elmod1 (ENSDLAG00005004868)	slc35f2 (ENSDLAG00005004826)	ENSDLAG00005029608	ENSDLAG00005030622	ompb (ENSDLAG00005030150)	CAPN5 (ENSDLAG00005004342)	MYO7A (ENSDLAG00005021005)	ENSDLAG00005020939	GDPD4 (ENSDLAG00005020922)	ENSDLAG00005029942 #22	ENSDLAG00005020900 #24	ENSDLAG00005020844	ENSDLAG00005020696	ENSDLAG00005020682	ENSDLAG00005020674	ENSDLAG00005020223	mpzl1l (ENSDLAG00005020196)	ENSDLAG00005020183	emsy (ENSDLAG00005020162)	ENSDLAG00005019993	ENSDLAG00005019989	rcc1l (ENSDLAG00005019919)	castor2 (ENSDLAG00005019867)	ENSDLAG00005019763	tmem248 (ENSDLAG00005019738)
Perciformes	ANCESTRAL SPECIES	26	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Cottioidei	ANCESTRAL SPECIES	70						ENSGT00940000159536	ENSGT00940000157695	ENSGT00940000157627	ENSGT00410000025800	ENSGT00940000157884	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b	ENSGT00950000183064.b	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095
Lumpfish	MODERN SPECIES	5	ENSCLMG00005015300	slc22a21 (ENSCLMG00005015272)	ENSCLMG00005015125	ENSCLMG00005015119	ppm1e (ENSCLMG00005015116)	TRIM37 (ENSCLMG00005014874)	ENSCLMG00005014872	pou2f3 (ENSCLMG00005014864)	p4ha2 (ENSCLMG00005010316)	pdlim4 (ENSCLMG00005010270)	SMG8 (ENSCLMG00005010268)	KCNJ15 (ENSCLMG00005010266)	vps26c (ENSCLMG00005010264)	ENSCLMG00005010262	ENSCLMG00005010255	AQP11 (ENSCLMG00005010253) #22	ENSCLMG00005010245 #24	FCHSD2 (ENSCLMG00005010240)	foxred1 (ENSCLMG00005010236)	STIM1 (ENSCLMG00005008968)	dub (ENSCLMG00005008964)	guca1d (ENSCLMG00005008963)	alg8 (ENSCLMG00005008959) #32	ccdc90b (ENSCLMG00005008957)	pcf11 (ENSCLMG00005008955)	ncbp3 (ENSCLMG00005008952)	ENSCLMG00005008948	ENSCLMG00005008946	ENSCLMG00005008945	ENSCLMG00005008944	TRAPPC14 (ENSCLMG00005008943)
Stickleback	MODERN SPECIES	7	irf1b (ENSGACG00000020876)	slc22a4 (ENSGACG00000020875)	slc22a21 (ENSGACG00000020874)	ENSGACG00000020873	ENSGACG00000020872	KCNJ15 (ENSGACG00000020871)	SMG8 (ENSGACG00000020870)	ppm1e (ENSGACG00000020869)	ENSGACG00000020868	TRIM37 (ENSGACG00000020867)	pou2f3 (ENSGACG00000020866)	p4ha2 (ENSGACG00000020865)	pdlim4 (ENSGACG00000020864)	vps26c (ENSGACG00000020863)	ENSGACG00000020862	AQP11 (ENSGACG00000020861) #22	ENSGACG00000020860	ENSGACG00000020859 #24	FCHSD2 (ENSGACG00000020858)	foxred1 (ENSGACG00000020857)	ENSGACG00000020856	rabep1 (ENSGACG00000020855)	ENSGACG00000020854	emsy (ENSGACG00000020853)	ENSGACG00000020852	tlcd5b (ENSGACG00000020851)	rcc1l (ENSGACG00000020850)	castor2 (ENSGACG00000020849)	DOC2B (ENSGACG00000020848)	tmem248 (ENSGACG00000020847)	lig3 (ENSGACG00000020846)
Perciformes_a	ANCESTRAL SPECIES	28	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT01000000215988	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758
Pike perch	MODERN SPECIES	22	TECTA (ENSSLUG00000011137)	ENSSLUG00000011130	ENSSLUG00000011121	ENSSLUG00000011113	ENSSLUG00000011107	CRK (ENSSLUG00000011101)	ywhae2 (ENSSLUG00000011090)	gria4b (ENSSLUG00000010926)	elmod1 (ENSSLUG00000010894)	slc35f2 (ENSSLUG00000010876)	CUL5 (ENSSLUG00000010739)	ompb (ENSSLUG00000010701)	CAPN5 (ENSSLUG00000010588)	MYO7A (ENSSLUG00000010473)	GDPD4 (ENSSLUG00000010437)	AQP11 (ENSSLUG00000010425) #22	ENSSLUG00000010413 #24	FCHSD2 (ENSSLUG00000009890)	foxred1 (ENSSLUG00000009775)	kcnj1b (ENSSLUG00000009737)	ENSSLUG00000009721	rabep1 (ENSSLUG00000007194)	mpzl1l (ENSSLUG00000006930)	ENSSLUG00000006923	emsy (ENSSLUG00000006888)	ENSSLUG00000006853	tlcd5b (ENSSLUG00000006841)	rcc1l (ENSSLUG00000006830)	castor2 (ENSSLUG00000006802)	ENSSLUG00000006794	DOC2B (ENSSLUG00000006783)
Channel bull blenny	MODERN SPECIES	96												CAPN5 (ENSCGOG00000009715)	ompb (ENSCGOG00000010124)	ENSCGOG00000010126	ENSCGOG00000014902	AQP11 (ENSCGOG00000014906) #22	ENSCGOG00000014908 #24	ENSCGOG00000014910	foxred1 (ENSCGOG00000014919)	kcnj1b (ENSCGOG00000014942)	ENSCGOG00000014944	ENSCGOG00000014958	ENSCGOG00000014986	tlcd5b (ENSCGOG00000014991)	ENSCGOG00000015006	ENSCGOG00000015052	tlcd5b (ENSCGOG00000015134)	ENSCGOG00000015138	rcc1l (ENSCGOG00000015139)	ENSCGOG00000015212
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Carangaria	ANCESTRAL SPECIES	16	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b.f	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Seriola	ANCESTRAL SPECIES	2	ENSGT00390000013989.b.i.a	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b.f	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c.m	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Greater amberjack	MODERN SPECIES	15									elmod1 (ENSSDUG00000007392)	slc35f2 (ENSSDUG00000007412)	CUL5 (ENSSDUG00000007449)	CAPN5 (ENSSDUG00000007506)	ompb (ENSSDUG00000007534)	MYO7A (ENSSDUG00000007550)	ENSSDUG00000007655	AQP11 (ENSSDUG00000007727) #22	ENSSDUG00000007741 #24	FCHSD2 (ENSSDUG00000007822)	foxred1 (ENSSDUG00000007926)	kcnj1b (ENSSDUG00000007971)	ENSSDUG00000007984	rabep1 (ENSSDUG00000008003)	mpzl1l (ENSSDUG00000008060)	ENSSDUG00000008067	emsy (ENSSDUG00000008095)	ENSSDUG00000008245	tlcd5b (ENSSDUG00000008328)	rcc1l (ENSSDUG00000008345)	castor2 (ENSSDUG00000008391)	DOC2B (ENSSDUG00000008423)	tmem248 (ENSSDUG00000008448)
Yellowtail amberjack	MODERN SPECIES	3202																AQP11 (ENSSLDG00000004065) #22	ENSSLDG00000003957 #24	FCHSD2 (ENSSLDG00000003884)	ENSSLDG00000003849	foxred1 (ENSSLDG00000003787)	kcnj1b (ENSSLDG00000003772)	ENSSLDG00000003751	rabep1 (ENSSLDG00000003669)	mpzl1l (ENSSLDG00000003637)	ENSSLDG00000003630	emsy (ENSSLDG00000003313)	ENSSLDG00000003171	tlcd5b (ENSSLDG00000003152)	rcc1l (ENSSLDG00000003094)	castor2 (ENSSLDG00000003053)	DOC2B (ENSSLDG00000002982)
Barramundi perch	MODERN SPECIES	94	ENSLCAG00010010419	picalma (ENSLCAG00010010406)	ZPLD1 (ENSLCAG00010010390)	ENSLCAG00010010381	KIRREL3 (ENSLCAG00010010320)	ENSLCAG00010010301	akt2l (ENSLCAG00010010265)	ENSLCAG00010010259	ENSLCAG00010010258	ENSLCAG00010010256	ompb (ENSLCAG00010010254)	CAPN5 (ENSLCAG00010010238)	MYO7A (ENSLCAG00010009935)	ENSLCAG00010009855	ENSLCAG00010009852	AQP11 (ENSLCAG00010009851) #22	ENSLCAG00010009849 #24	FCHSD2 (ENSLCAG00010009768)	foxred1 (ENSLCAG00010009701)	kcnj1b (ENSLCAG00010009690)	ENSLCAG00010009688	ENSLCAG00010009687	rabep1 (ENSLCAG00010009583)	mpzl1l (ENSLCAG00010009553)	ENSLCAG00010009547	emsy (ENSLCAG00010009535)	ENSLCAG00010009376	tlcd5b (ENSLCAG00010009340)	rcc1l (ENSLCAG00010009331)
Pleuronectoidei	ANCESTRAL SPECIES	32	ENSGT00390000013989.b.j	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Tongue sole	MODERN SPECIES	10	ENSCSEG00000015849	TECTA (ENSCSEG00000015826)	ENSCSEG00000015810	ENSCSEG00000015801	ENSCSEG00000015789	CRK (ENSCSEG00000015777)	ENSCSEG00000015677	gria4b (ENSCSEG00000015575)	elmod1 (ENSCSEG00000015527)	slc35f2 (ENSCSEG00000015491)	CUL5 (ENSCSEG00000015456)	ompb (ENSCSEG00000015444)	CAPN5 (ENSCSEG00000015427)	MYO7A (ENSCSEG00000015251)	ENSCSEG00000015202	ENSCSEG00000015230 #22	ENSCSEG00000015171 #24	FCHSD2 (ENSCSEG00000015081)	foxred1 (ENSCSEG00000015059)	kcnj1b (ENSCSEG00000015056)	ENSCSEG00000015046	rabep1 (ENSCSEG00000015015)	mpzl1l (ENSCSEG00000014998)	ENSCSEG00000014996	emsy (ENSCSEG00000014978)	ENSCSEG00000014864	tlcd5b (ENSCSEG00000014847)	rcc1l (ENSCSEG00000014772)	castor2 (ENSCSEG00000014753)	DOC2B (ENSCSEG00000014740)	tmem248 (ENSCSEG00000014724)
Turbot	MODERN SPECIES	16	ENSSMAG00000015937	ENSSMAG00000015824	ENSSMAG00000031157	ENSSMAG00000022744	ENSSMAG00000015767	ENSSMAG00000015748	ENSSMAG00000015736	ENSSMAG00000015721	ENSSMAG00000015686	ENSSMAG00000015644	slc35f2 (ENSSMAG00000015633)	ENSSMAG00000015509	ompb (ENSSMAG00000015574)	MYO7A (ENSSMAG00000015416)	ENSSMAG00000032239	ENSSMAG00000015371 #22	ENSSMAG00000015302 #24	ENSSMAG00000015221	ENSSMAG00000015191	ENSSMAG00000015180	ENSSMAG00000015173	ENSSMAG00000015049	mpzl1l (ENSSMAG00000015032)	ENSSMAG00000032956	emsy (ENSSMAG00000015001)	ENSSMAG00000035998	ENSSMAG00000014991	rcc1l (ENSSMAG00000014964)	castor2 (ENSSMAG00000031872)	ENSSMAG00000024921	ENSSMAG00000014938
Anabantaria	ANCESTRAL SPECIES	13	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Zig-zag eel	MODERN SPECIES	5	ENSMAMG00000001008	castor2 (ENSMAMG00000001064)	rcc1l (ENSMAMG00000001100)	ENSMAMG00000001187	ENSMAMG00000001216	emsy (ENSMAMG00000001261)	ENSMAMG00000026881	mpzl1l (ENSMAMG00000027186)	ENSMAMG00000001354	ENSMAMG00000001418	ENSMAMG00000001430	ENSMAMG00000001452	ENSMAMG00000001495	ENSMAMG00000001547 #24	ENSMAMG00000001623	ENSMAMG00000001646 #22	ENSMAMG00000001667	ENSMAMG00000001817	ompb (ENSMAMG00000001842)	ENSMAMG00000001854	slc35f2 (ENSMAMG00000001954)	elmod1 (ENSMAMG00000001980)	ENSMAMG00000002020	ENSMAMG00000025128	ENSMAMG00000025496	ENSMAMG00000002121	ENSMAMG00000002154	ENSMAMG00000002185	ENSMAMG00000002201	ENSMAMG00000002275	ENSMAMG00000002295
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Siamese fighting fish	MODERN SPECIES	5	sc5d (ENSBSLG00000011936)	TBCEL (ENSBSLG00000012032)	USP2 (ENSBSLG00000012236)	ENSBSLG00000012541	ENSBSLG00000013062	CRK (ENSBSLG00000013097)	ywhae2 (ENSBSLG00000013175)	ENSBSLG00000013482	elmod1 (ENSBSLG00000014921)	slc35f2 (ENSBSLG00000014935)	CUL5 (ENSBSLG00000014944)	CAPN5 (ENSBSLG00000015069)	ompb (ENSBSLG00000015121)	MYO7A (ENSBSLG00000015124)	ENSBSLG00000015677	AQP11 (ENSBSLG00000015706) #22	ENSBSLG00000015712 #24	FCHSD2 (ENSBSLG00000015745)	foxred1 (ENSBSLG00000015901)	kcnj1b (ENSBSLG00000015983)	ENSBSLG00000015986	rabep1 (ENSBSLG00000016006)	mpzl1l (ENSBSLG00000016417)	ENSBSLG00000016421	emsy (ENSBSLG00000016423)	ENSBSLG00000016441	tlcd5b (ENSBSLG00000016467)	rcc1l (ENSBSLG00000016472)	castor2 (ENSBSLG00000016483)	DOC2B (ENSBSLG00000016488)	ENSBSLG00000016500
Climbing perch	MODERN SPECIES	5	ENSATEG00000000785	ENSATEG00000000678	ENSATEG00000000617	ENSATEG00000000611	ENSATEG00000000597	ENSATEG00000000567	ENSATEG00000000528	ENSATEG00000000466	elmod1 (ENSATEG00000000421)	slc35f2 (ENSATEG00000000410)	ENSATEG00000000395	ompb (ENSATEG00000000380)	CAPN5 (ENSATEG00000000315)	MYO7A (ENSATEG00000000073)	GDPD4 (ENSATEG00000000053)	ENSATEG00000023313 #22	ENSATEG00000023296 #24	ENSATEG00000023272	ENSATEG00000023255	ENSATEG00000023244	ENSATEG00000023239	ENSATEG00000023217	mpzl1l (ENSATEG00000029159)	ENSATEG00000023203	emsy (ENSATEG00000023194)	ENSATEG00000026928	ENSATEG00000023177	rcc1l (ENSATEG00000023157)	castor2 (ENSATEG00000023144)	ENSATEG00000023135	tmem248 (ENSATEG00000023124)
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Oryzias	ANCESTRAL SPECIES	14	ENSGT00550000075101.q	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Oryzias_b	ANCESTRAL SPECIES	53	ENSGT00390000000141	ENSGT00950000183055.a.b	ENSGT00940000165106	ENSGT00940000164016	ENSGT00940000161062	ENSGT00530000063786.b	ENSGT00940000160785	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a
Indian medaka	MODERN SPECIES	4	plekhb1 (ENSOMEG00000002335)	TBCEL (ENSOMEG00000002324)	TECTA (ENSOMEG00000002309)	ENSOMEG00000002284	ENSOMEG00000002274	ENSOMEG00000002261	CRK (ENSOMEG00000002246)	ywhae2 (ENSOMEG00000002238)	gria4b (ENSOMEG00000002214)	MYO7A (ENSOMEG00000002179)	CAPN5 (ENSOMEG00000002138)	ompb (ENSOMEG00000002119)	CUL5 (ENSOMEG00000002107)	slc35f2 (ENSOMEG00000000029)	elmod1 (ENSOMEG00000000025)	AQP11 (ENSOMEG00000002076) #22	ENSOMEG00000002068 #24	FCHSD2 (ENSOMEG00000002057)	foxred1 (ENSOMEG00000002042)	kcnj1b (ENSOMEG00000002032)	ENSOMEG00000002025	rabep1 (ENSOMEG00000002008)	mpzl1l (ENSOMEG00000001988)	ENSOMEG00000001980	emsy (ENSOMEG00000001967)	ENSOMEG00000001943	ENSOMEG00000001873	ENSOMEG00000000012	st6gal1 (ENSOMEG00000001712)	ncf1 (ENSOMEG00000001705)	gria1b (ENSOMEG00000001682)
Javanese ricefish	MODERN SPECIES	5	klf8 (ENSOJAG00000017854)	rbm41 (ENSOJAG00000017881)	cldn2 (ENSOJAG00000017911)	CLIP2 (ENSOJAG00000017947)	GTF2IRD1 (ENSOJAG00000018222)	dtx2 (ENSOJAG00000018414)	tmem132e (ENSOJAG00000018444)	rad51d (ENSOJAG00000018456)	lig3 (ENSOJAG00000018520)	tmem248 (ENSOJAG00000019496)	ENSOJAG00000019539	ENSOJAG00000019559	ENSOJAG00000019594	ENSOJAG00000019602	ENSOJAG00000019613	AQP11 (ENSOJAG00000019634) #22	FCHSD2 (ENSOJAG00000019670)	foxred1 (ENSOJAG00000019696)	kcnj1b (ENSOJAG00000019720)	ENSOJAG00000019733	rabep1 (ENSOJAG00000019803)	mpzl1l (ENSOJAG00000020322)	ENSOJAG00000020336	emsy (ENSOJAG00000020358)	ENSOJAG00000020578	tlcd5b (ENSOJAG00000020586)	rcc1l (ENSOJAG00000020598)	DOC2B (ENSOJAG00000020663)	CAPN5 (ENSOJAG00000020775)	ompb (ENSOJAG00000020893)	slc35f2 (ENSOJAG00000001681)
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT01030000234886.e.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114.e	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Japanese Medaka HdrR	MODERN SPECIES	5	ENSORLG00000014803	ENSORLG00000014818	ENSORLG00000014825	ENSORLG00000023366	ywhae2 (ENSORLG00000014845)	ENSORLG00000026199	gria4b (ENSORLG00000014865)	ENSORLG00000029515	elmod1 (ENSORLG00000014887)	slc35f2 (ENSORLG00000014902)	ENSORLG00000014938	ENSORLG00000014975	ompb (ENSORLG00000014978)	ENSORLG00000015036	ENSORLG00000021923	ENSORLG00000015053 #22	ENSORLG00000028843 #24	ENSORLG00000028737	foxred1 (ENSORLG00000015079)	kcnj1b (ENSORLG00000015086)	ENSORLG00000029829	rabep1 (ENSORLG00000015131)	mpzl1l (ENSORLG00000023228)	ENSORLG00000023939	emsy (ENSORLG00000023771)	ENSORLG00000022756	ENSORLG00000025239	rcc1l (ENSORLG00000015158)	castor2 (ENSORLG00000015182)	DOC2B (ENSORLG00000015189)	tmem248 (ENSORLG00000015203)
Chinese medaka	MODERN SPECIES	4612																ENSOSIG00000002571 #22
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00940000175256	ENSGT00940000157670	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Poeciliinae	ANCESTRAL SPECIES	26	ENSGT00940000157670	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000166878	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317	ENSGT00390000006208.a
Poecilia	ANCESTRAL SPECIES	42	ENSGT00940000157670	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000166878	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317	ENSGT00390000006208.a
NAME_6	ANCESTRAL SPECIES	44	ENSGT00940000157670	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000166878	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317	ENSGT00390000006208.a
Sailfin molly	MODERN SPECIES	1380								tmem120aa (ENSPLAG00000014736)	styxl1 (ENSPLAG00000014729)	ENSPLAG00000014688	CAPN5 (ENSPLAG00000014677)	ompb (ENSPLAG00000014646)	MYO7A (ENSPLAG00000014621)	ENSPLAG00000014530	ENSPLAG00000014481	ENSPLAG00000014470 #22	ENSPLAG00000014456	ENSPLAG00000014433 #24	FCHSD2 (ENSPLAG00000014426)	foxred1 (ENSPLAG00000014418)
Amazon molly	MODERN SPECIES	393	HTR3B (ENSPFOG00000016571)	USP28 (ENSPFOG00000016610)	orai2 (ENSPFOG00000016719)	bckdk (ENSPFOG00000016728)	lrwd1 (ENSPFOG00000016751)	alkbh4 (ENSPFOG00000016780)	CBL (ENSPFOG00000016793)	ENSPFOG00000016824	tmem120aa (ENSPFOG00000016887)	styxl1 (ENSPFOG00000022292)	HEPACAM (ENSPFOG00000016926)	CAPN5 (ENSPFOG00000016938)	ompb (ENSPFOG00000020859)	MYO7A (ENSPFOG00000017038)	ENSPFOG00000017311	ENSPFOG00000017383 #22	ENSPFOG00000020860	ENSPFOG00000023805 #24
Guppy	MODERN SPECIES	444	HTR3B (ENSPREG00000015317)	USP28 (ENSPREG00000015298)	orai2 (ENSPREG00000015290)	bckdk (ENSPREG00000015279)	lrwd1 (ENSPREG00000015261)	alkbh4 (ENSPREG00000015249)	CBL (ENSPREG00000015193)	ENSPREG00000015099	tmem120aa (ENSPREG00000015067)	styxl1 (ENSPREG00000015018)	HEPACAM (ENSPREG00000014972)	ompb (ENSPREG00000014958)	CAPN5 (ENSPREG00000014934)	MYO7A (ENSPREG00000014771)	GDPD4 (ENSPREG00000014734)	ENSPREG00000014730 #22	ENSPREG00000014700 #24	FCHSD2 (ENSPREG00000014659)	foxred1 (ENSPREG00000014645)	kcnj1b (ENSPREG00000014638)	ENSPREG00000014624	rabep1 (ENSPREG00000014547)	mpzl1l (ENSPREG00000014512)	ENSPREG00000014506	emsy (ENSPREG00000014428)	ENSPREG00000014395	tlcd5b (ENSPREG00000014386)	ENSPREG00000014384	rcc1l (ENSPREG00000014358)	castor2 (ENSPREG00000014328)	DOC2B (ENSPREG00000014289)
Platyfish	MODERN SPECIES	2	ENSXMAG00000023400	ywhae2 (ENSXMAG00000000541)	gria4b (ENSXMAG00000008529)	elmod1 (ENSXMAG00000012302)	slc35f2 (ENSXMAG00000015958)	CUL5 (ENSXMAG00000012228)	cbln10 (ENSXMAG00000012226)	ENSXMAG00000025188	tmem120aa (ENSXMAG00000011139)	styxl1 (ENSXMAG00000011154)	HEPACAM (ENSXMAG00000027038)	ompb (ENSXMAG00000019651)	CAPN5 (ENSXMAG00000011169)	MYO7A (ENSXMAG00000011193)	GDPD4 (ENSXMAG00000011255)	AQP11 (ENSXMAG00000000651) #22	ENSXMAG00000027612	ENSXMAG00000028499 #24	FCHSD2 (ENSXMAG00000011270)	foxred1 (ENSXMAG00000011302)	kcnj1b (ENSXMAG00000011316)	ENSXMAG00000011318	rabep1 (ENSXMAG00000011320)	mpzl1l (ENSXMAG00000011358)	ENSXMAG00000028354	emsy (ENSXMAG00000011362)	ENSXMAG00000011381	ENSXMAG00000021745	tlcd5b (ENSXMAG00000023906)	ENSXMAG00000025697	rcc1l (ENSXMAG00000011400)
NAME_4	ANCESTRAL SPECIES	117				ENSGT00390000006344	ENSGT00940000155772.a.b	ENSGT00940000155838.f	ENSGT00390000007848.a.d	ENSGT00940000164883	ENSGT01100000263551.a.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Mummichog	MODERN SPECIES	755											CAPN5 (ENSFHEG00000017686)	ompb (ENSFHEG00000017653)	MYO7A (ENSFHEG00000017637)	ENSFHEG00000017569	ENSFHEG00000017555	ENSFHEG00000017505 #22
Sheepshead minnow	MODERN SPECIES	517														MYO7A (ENSCVAG00000011913)	ENSCVAG00000012002	ENSCVAG00000012044 #22	ENSCVAG00000012733 #24	FCHSD2 (ENSCVAG00000012852)	foxred1 (ENSCVAG00000012954)	kcnj1b (ENSCVAG00000012991)	ENSCVAG00000013026	rabep1 (ENSCVAG00000013087)	mpzl1l (ENSCVAG00000013110)	ENSCVAG00000013118	emsy (ENSCVAG00000013350)	tlcd5b (ENSCVAG00000013414)
Aplocheiloidei	ANCESTRAL SPECIES	59	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Mangrove rivulus	MODERN SPECIES	318			ENSKMAG00000009112	ENSKMAG00000009090	CRK (ENSKMAG00000009068)	ywhae2 (ENSKMAG00000009042)	gria4b (ENSKMAG00000008971)	elmod1 (ENSKMAG00000008891)	slc35f2 (ENSKMAG00000008856)	CUL5 (ENSKMAG00000008785)	ompb (ENSKMAG00000008765)	CAPN5 (ENSKMAG00000008716)	MYO7A (ENSKMAG00000008633)	ENSKMAG00000008541	GDPD4 (ENSKMAG00000008513)	ENSKMAG00000008498 #22	ENSKMAG00000008467
Turquoise killifish	MODERN SPECIES	1620	ENSNFUG00015005537	zgc:162171 (ENSNFUG00015005531)	MED31 (ENSNFUG00015005523)	ENSNFUG00015005515	ENSNFUG00015005509	RNASEK-C17ORF49 (ENSNFUG00015005502)	RNASEKB (ENSNFUG00015005499)	nup98 (ENSNFUG00015005465)	ENSNFUG00015005462	ENSNFUG00015005460	NHP2 (ENSNFUG00015005456)	ENSNFUG00015005450	ENSNFUG00015005443	ENSNFUG00015005429	ENSNFUG00015005424	ENSNFUG00015005420 #22	ENSNFUG00015005411	ENSNFUG00015005384 #24	FCHSD2 (ENSNFUG00015005345)	FOXRED1 (ENSNFUG00015005086)	kcnj1b (ENSNFUG00015005034)	ENSNFUG00015005030	RABEP1 (ENSNFUG00015004848)	ENSNFUG00015022801	MPZL1L (ENSNFUG00015022796)	LRRC32 (ENSNFUG00015022791)	ENSNFUG00015022790	C10H11ORF30 (ENSNFUG00015022778)	ARHGEF12B (ENSNFUG00015022760)	TMEM136 (ENSNFUG00015022755)	rcc1l (ENSNFUG00015022719)
Ovalentaria_B	ANCESTRAL SPECIES	16	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Cichlidae	ANCESTRAL SPECIES	4	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	14	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	22	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Haplochromini	ANCESTRAL SPECIES	8	ENSGT00390000013989.b	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Burton s mouthbrooder	MODERN SPECIES	282	TBCEL (ENSHBUG00000012511)	TECTA (ENSHBUG00000012560)	ENSHBUG00000012616	ENSHBUG00000012627	ENSHBUG00000012649	ENSHBUG00000012670	ywhae2 (ENSHBUG00000012708)	gria4b (ENSHBUG00000012754)	elmod1 (ENSHBUG00000012814)	slc35f2 (ENSHBUG00000012868)	CUL5 (ENSHBUG00000012991)	ompb (ENSHBUG00000013019)	CAPN5 (ENSHBUG00000013069)	MYO7A (ENSHBUG00000013188)	GDPD4 (ENSHBUG00000013213)	ENSHBUG00000013243 #22	ENSHBUG00000013341 #24	FCHSD2 (ENSHBUG00000013486)	foxred1 (ENSHBUG00000013505)	kcnj1b (ENSHBUG00000013510)	ENSHBUG00000013532	rabep1 (ENSHBUG00000013663)	mpzl1l (ENSHBUG00000013690)	ENSHBUG00000013703	emsy (ENSHBUG00000013803)	ENSHBUG00000013827	tlcd5b (ENSHBUG00000013844)	rcc1l (ENSHBUG00000013891)	castor2 (ENSHBUG00000013944)	DOC2B (ENSHBUG00000013991)	tmem248 (ENSHBUG00000014025)
Haplochromini_A	ANCESTRAL SPECIES	6	ENSGT00390000013989.b.g.a	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
P. nyererei	MODERN SPECIES	310	TECTA (ENSPNYG00000010819)	ENSPNYG00000010915	ENSPNYG00000010944	ENSPNYG00000010953	CRK (ENSPNYG00000010973)	ywhae2 (ENSPNYG00000010998)	gria4b (ENSPNYG00000011041)	elmod1 (ENSPNYG00000011122)	slc35f2 (ENSPNYG00000011151)	CUL5 (ENSPNYG00000011193)	CAPN5 (ENSPNYG00000011323)	ompb (ENSPNYG00000011353)	MYO7A (ENSPNYG00000011380)	ENSPNYG00000011471	ENSPNYG00000011495	ENSPNYG00000011524 #22	ENSPNYG00000011536 #24	FCHSD2 (ENSPNYG00000011552)	ENSPNYG00000011581	foxred1 (ENSPNYG00000011608)	kcnj1b (ENSPNYG00000011686)	ENSPNYG00000011703	rabep1 (ENSPNYG00000011756)	ENSPNYG00000011844	mpzl1l (ENSPNYG00000011860)	ENSPNYG00000011873	emsy (ENSPNYG00000011893)	ENSPNYG00000011983	tlcd5b (ENSPNYG00000012027)	rcc1l (ENSPNYG00000012045)	castor2 (ENSPNYG00000012091)
Haplochromini_B	ANCESTRAL SPECIES	16	ENSGT00390000013989.b.g.a	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00940000156758	ENSGT00940000153883.b
Zebra mbuna	MODERN SPECIES	1092	TBCEL (ENSMZEG00005010743)	TECTA (ENSMZEG00005010758)	ENSMZEG00005010774	ENSMZEG00005010803	ENSMZEG00005010810	CRK (ENSMZEG00005010819)	ywhae2 (ENSMZEG00005010829)	gria4b (ENSMZEG00005010846)	elmod1 (ENSMZEG00005010879)	slc35f2 (ENSMZEG00005010904)	CUL5 (ENSMZEG00005010930)	CAPN5 (ENSMZEG00005010960)	ompb (ENSMZEG00005010970)	MYO7A (ENSMZEG00005011034)	ENSMZEG00005011111	ENSMZEG00005011123 #22	ENSMZEG00005011134 #24	FCHSD2 (ENSMZEG00005011163)	foxred1 (ENSMZEG00005011217)	kcnj1b (ENSMZEG00005011231)	ENSMZEG00005011235	rabep1 (ENSMZEG00005011268)	mpzl1l (ENSMZEG00005011307)	ENSMZEG00005011320	emsy (ENSMZEG00005011328)	ENSMZEG00005011352	tlcd5b (ENSMZEG00005011365)	rcc1l (ENSMZEG00005011370)	castor2 (ENSMZEG00005011388)	DOC2B (ENSMZEG00005011406)	tmem248 (ENSMZEG00005011420)
Eastern happy	MODERN SPECIES	1	ENSACLG00000022467	ENSACLG00000022557	ENSACLG00000022564	CRK (ENSACLG00000022569)	ywhae2 (ENSACLG00000022608)	gria4b (ENSACLG00000022681)	ENSACLG00000022741	elmod1 (ENSACLG00000022760)	slc35f2 (ENSACLG00000022846)	CUL5 (ENSACLG00000022875)	CAPN5 (ENSACLG00000022960)	ompb (ENSACLG00000023024)	ENSACLG00000023038	MYO7A (ENSACLG00000023046)	ENSACLG00000023124	ENSACLG00000023144 #22	ENSACLG00000023168 #24	FCHSD2 (ENSACLG00000023201)	foxred1 (ENSACLG00000023282)	kcnj1b (ENSACLG00000023295)	ENSACLG00000023304	rabep1 (ENSACLG00000023321)	mpzl1l (ENSACLG00000023426)	ENSACLG00000023438	emsy (ENSACLG00000023444)	ENSACLG00000023550	tlcd5b (ENSACLG00000023621)	rcc1l (ENSACLG00000023656)	castor2 (ENSACLG00000023707)	DOC2B (ENSACLG00000023750)	ENSACLG00000023794
Lyretail cichlid	MODERN SPECIES	297	TBCEL (ENSNBRG00000012856)	TECTA (ENSNBRG00000012877)	ENSNBRG00000012931	ENSNBRG00000012965	ENSNBRG00000012996	CRK (ENSNBRG00000013010)	ywhae2 (ENSNBRG00000013043)	gria4b (ENSNBRG00000013070)	elmod1 (ENSNBRG00000013140)	slc35f2 (ENSNBRG00000013171)	CUL5 (ENSNBRG00000013257)	CAPN5 (ENSNBRG00000013353)	ompb (ENSNBRG00000013376)	MYO7A (ENSNBRG00000013391)	ENSNBRG00000013486	ENSNBRG00000013531 #22	ENSNBRG00000013541 #24	FCHSD2 (ENSNBRG00000013569)	ENSNBRG00000013607	foxred1 (ENSNBRG00000013634)	kcnj1b (ENSNBRG00000013734)	rabep1 (ENSNBRG00000013749)	mpzl1l (ENSNBRG00000013802)	ENSNBRG00000013811	emsy (ENSNBRG00000013848)	ENSNBRG00000013965	tlcd5b (ENSNBRG00000014071)	rcc1l (ENSNBRG00000014086)	castor2 (ENSNBRG00000014104)	DOC2B (ENSNBRG00000014131)	tmem248 (ENSNBRG00000014163)
Nile tilapia	MODERN SPECIES	1	TECTA (ENSONIG00000009508)	ENSONIG00000009511	ENSONIG00000009512	ENSONIG00000009514	CRK (ENSONIG00000009518)	ywhae2 (ENSONIG00000032945)	gria4b (ENSONIG00000009523)	elmod1 (ENSONIG00000009536)	slc35f2 (ENSONIG00000009539)	CUL5 (ENSONIG00000009545)	CAPN5 (ENSONIG00000009550)	ompb (ENSONIG00000021460)	ENSONIG00000027896	MYO7A (ENSONIG00000009556)	ENSONIG00000009570	AQP11 (ENSONIG00000009574) #22	ENSONIG00000009575 #24	ENSONIG00000032351	ENSONIG00000038404	FCHSD2 (ENSONIG00000013349)	foxred1 (ENSONIG00000013346)	kcnj1b (ENSONIG00000013345)	ENSONIG00000013344	rabep1 (ENSONIG00000013337)	mpzl1l (ENSONIG00000013334)	ENSONIG00000013333	emsy (ENSONIG00000013319)	ENSONIG00000013306	tlcd5b (ENSONIG00000013304)	rcc1l (ENSONIG00000013300)	castor2 (ENSONIG00000013294)
Midas cichlid	MODERN SPECIES	344	TECTA (ENSACIG00000012735)	ENSACIG00000012788	ENSACIG00000012816	ENSACIG00000012844	ENSACIG00000012851	CRK (ENSACIG00000012862)	ywhae2 (ENSACIG00000012875)	gria4b (ENSACIG00000012893)	elmod1 (ENSACIG00000012935)	slc35f2 (ENSACIG00000012974)	CUL5 (ENSACIG00000013036)	CAPN5 (ENSACIG00000013078)	ompb (ENSACIG00000013111)	MYO7A (ENSACIG00000013121)	ENSACIG00000013215	AQP11 (ENSACIG00000013247) #22	ENSACIG00000013262 #24	FCHSD2 (ENSACIG00000013308)	ENSACIG00000013347	foxred1 (ENSACIG00000013363)	kcnj1b (ENSACIG00000013421)	ENSACIG00000013430	rabep1 (ENSACIG00000013444)	mpzl1l (ENSACIG00000013477)	ENSACIG00000013488	emsy (ENSACIG00000013498)	ENSACIG00000013556	tlcd5b (ENSACIG00000013657)	rcc1l (ENSACIG00000013668)	castor2 (ENSACIG00000013695)	DOC2B (ENSACIG00000013720)
Pomacentridae	ANCESTRAL SPECIES	57	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e
Pomacentridae_A	ANCESTRAL SPECIES	65	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e
Amphiprion	ANCESTRAL SPECIES	71	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000158479	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00530000064449.A.b.b.t.a.a	ENSGT00390000008162.e	ENSGT00940000159782.b.g	ENSGT00940000155677.b	ENSGT00820000127055.a.b
Clown anemonefish	MODERN SPECIES	3551															ENSAOCG00000006384	AQP11 (ENSAOCG00000006358) #22	ENSAOCG00000006338	ENSAOCG00000006313 #24	FCHSD2 (ENSAOCG00000006252)	foxred1 (ENSAOCG00000006235)	kcnj1b (ENSAOCG00000006214)	ENSAOCG00000006184	rabep1 (ENSAOCG00000006147)	mpzl1l (ENSAOCG00000006040)	ENSAOCG00000006032	emsy (ENSAOCG00000006020)
Orange clownfish	MODERN SPECIES	6	dtx2 (ENSAPEG00000010133)	tmem132e (ENSAPEG00000010174)	rad51d (ENSAPEG00000010305)	lig3 (ENSAPEG00000010317)	tmem248 (ENSAPEG00000010347)	DOC2B (ENSAPEG00000010376)	castor2 (ENSAPEG00000010421)	rcc1l (ENSAPEG00000010470)	slc35f2 (ENSAPEG00000010522)	CUL5 (ENSAPEG00000010633)	setb (ENSAPEG00000010707)	CAPN5 (ENSAPEG00000010775)	ompb (ENSAPEG00000010827)	MYO7A (ENSAPEG00000010851)	ENSAPEG00000011042	AQP11 (ENSAPEG00000011055) #22	ENSAPEG00000011071	ENSAPEG00000011098 #24	FCHSD2 (ENSAPEG00000011205)	foxred1 (ENSAPEG00000011215)	kcnj1b (ENSAPEG00000011228)	ENSAPEG00000011285	rabep1 (ENSAPEG00000011338)	mpzl1l (ENSAPEG00000011425)	ENSAPEG00000011454	emsy (ENSAPEG00000011470)	ENSAPEG00000011590	ENSAPEG00000011613	tlcd5b (ENSAPEG00000011625)	elmod1 (ENSAPEG00000011637)	gria4b (ENSAPEG00000011689)
Spiny chromis	MODERN SPECIES	2097															ENSAPOG00000001292	ENSAPOG00000001283 #22	pgap4 (ENSAPOG00000001279)
Bicolor damselfish	MODERN SPECIES	509												ompb (ENSSPAG00000005744)	CAPN5 (ENSSPAG00000005714)	MYO7A (ENSSPAG00000005595)	GDPD4 (ENSSPAG00000005565)	AQP11 (ENSSPAG00000005549) #22	ENSSPAG00000005531 #24	FCHSD2 (ENSSPAG00000005482)	foxred1 (ENSSPAG00000005430)	kcnj1b (ENSSPAG00000005420)	ENSSPAG00000005408	rabep1 (ENSSPAG00000005310)	mpzl1l (ENSSPAG00000005279)	ENSSPAG00000005269	emsy (ENSSPAG00000005235)
Tiger tail seahorse	MODERN SPECIES	174	TBCEL (ENSHCOG00000010031)	TECTA (ENSHCOG00000010017)	USP2 (ENSHCOG00000000312)	ENSHCOG00000009950	ENSHCOG00000009939	CRK (ENSHCOG00000009925)	ywhae2 (ENSHCOG00000009904)	gria4b (ENSHCOG00000009872)	elmod1 (ENSHCOG00000009827)	slc35f2 (ENSHCOG00000009797)	cul5a (ENSHCOG00000009785)	CAPN5 (ENSHCOG00000009737)	ompb (ENSHCOG00000009715)	MYO7A (ENSHCOG00000009703)	ENSHCOG00000009612	AQP11 (ENSHCOG00000009586) #22	ENSHCOG00000009570 #24	FCHSD2 (ENSHCOG00000009540)	ENSHCOG00000009502	ENSHCOG00000009469	alox5ap (ENSHCOG00000009254)	ENSHCOG00000009242	ENSHCOG00000009221	ENSHCOG00000009193	zar1l (ENSHCOG00000009172)	PDS5B (ENSHCOG00000009149)	KL (ENSHCOG00000009112)	rfc3 (ENSHCOG00000009093)	ENSHCOG00000009063	ENSHCOG00000009044	SERTM1 (ENSHCOG00000009019)
Pinecone sodierfish	MODERN SPECIES	5	plekhb1 (ENSMMDG00005015912)	sc5d (ENSMMDG00005015902)	cadm1a (ENSMMDG00005015899)	ncam1a (ENSMMDG00005014838)	zbtb16a (ENSMMDG00005014811)	HTR3A (ENSMMDG00005014807)	HTR3B (ENSMMDG00005014804)	USP28 (ENSMMDG00005010690)	orai2 (ENSMMDG00005010635)	bckdk (ENSMMDG00005010570)	lrwd1 (ENSMMDG00005010558)	ENSMMDG00005010553	ENSMMDG00005010546	alkbh4 (ENSMMDG00005010541)	CBL (ENSMMDG00005010540)	ENSMMDG00005010536 #22	ENSMMDG00005010534 #24	FCHSD2 (ENSMMDG00005010529)	ENSMMDG00005010526	foxred1 (ENSMMDG00005010328)	kcnj1b (ENSMMDG00005010321)	ENSMMDG00005010320	rabep1 (ENSMMDG00005008501)	mpzl1l (ENSMMDG00005008442)	ENSMMDG00005008440	emsy (ENSMMDG00005008415)	ENSMMDG00005008401	ENSMMDG00005008393	ENSMMDG00005008388	tlcd5b (ENSMMDG00005008386)	rcc1l (ENSMMDG00005008269)
Cod	MODERN SPECIES	20	ENSGMOG00000017287	tmem248 (ENSGMOG00000003359)	ENSGMOG00000003307	ENSGMOG00000003267	tmem132e (ENSGMOG00000030984)	ENSGMOG00000013676	ENSGMOG00000013638	ENSGMOG00000013615	ENSGMOG00000031546	smfn (ENSGMOG00000006370)	ENSGMOG00000036095	ENSGMOG00000006457	ENSGMOG00000006673	ENSGMOG00000006998	ENSGMOG00000022261	ENSGMOG00000023961 #22	ENSGMOG00000028510 #24	ENSGMOG00000006084	ENSGMOG00000024602	ENSGMOG00000006075	ENSGMOG00000006069	ENSGMOG00000031628	ncam1a (ENSGMOG00000019522)	zbtb16a (ENSGMOG00000012795)	HTR3A (ENSGMOG00000024159)	HTR3A (ENSGMOG00000012790)	ENSGMOG00000012786	USP28 (ENSGMOG00000012774)	ENSGMOG00000013151	ENSGMOG00000013164	ENSGMOG00000011048
Protacanthopterygii	ANCESTRAL SPECIES	180	ENSGT00390000006114	ENSGT00530000063405.b.f	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.c.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22
Salmoninae	ANCESTRAL SPECIES	35	ENSGT00950000183155.a.a.a.b.c	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00390000009497.a.c	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a #22	ENSGT00390000010063.pb #23	ENSGT00530000064411.b.e #24	ENSGT00390000008610.a.b.b.a.a.b	ENSGT00510000046732.A.c.q	ENSGT00390000005140.a.o.a	ENSGT00390000013989.b.f	ENSGT01100000263504.a.a.ob.a	ENSGT00940000164977.a.a	ENSGT00390000002548	ENSGT00940000155573.g.b.b	ENSGT00940000155478.hb.b.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b.e	ENSGT00950000182985.a.b.a.b
Huchen	MODERN SPECIES	2733											ENSHHUG00000052009	CAPN5 (ENSHHUG00000052003)	MYO7A (ENSHHUG00000051812)	GDPD4 (ENSHHUG00000051796)	ENSHHUG00000051794	ENSHHUG00000051792 #22
Salmoninae_a	ANCESTRAL SPECIES	44	ENSGT00950000183155.a.a.a.b.c	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00390000009497.a.c	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a #22	ENSGT00390000010063.pb #23	ENSGT00530000064411.b.e #24	ENSGT00390000008610.a.b.b.a.a.b	ENSGT00510000046732.A.c.q	ENSGT00390000005140.a.o.a	ENSGT00390000013989.b.f	ENSGT00940000164977.a.a	ENSGT00390000002548.j	ENSGT00940000155573.g.b.b	ENSGT00940000155478.hb.b.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b.e	ENSGT00950000182985.a.b.a.b	ENSGT01030000234613.b.b.h.a
Oncorhynchus	ANCESTRAL SPECIES	41	ENSGT00530000063405.b.f.e	ENSGT00950000183155.a.a.a.b.c	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a #22	ENSGT00390000010063.pb.a #23	ENSGT00530000064411.b.e #24	ENSGT00390000008610.a.b.b.a.a.b	ENSGT00510000046732.A.c.q	ENSGT00390000005140.a.o.a	ENSGT00390000013989.b.f	ENSGT00940000164977.a.a	ENSGT00390000002548.j	ENSGT00940000155573.g.b.b	ENSGT00940000155478.hb.b.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b.e	ENSGT00950000182985.a.b.a.b	ENSGT01030000234613.b.b.h.a
Oncorhynchus_a	ANCESTRAL SPECIES	43	ENSGT00950000183155.a.a.a.b.c	ENSGT00940000155545.b.f	ENSGT00940000161289.n.a.b	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a #22	ENSGT00390000010063.pb.a #23	ENSGT00530000064411.b.e #24	ENSGT00390000008610.a.b.b.a.a.b	ENSGT00510000046732.A.c.q	ENSGT00390000005140.a.o.a	ENSGT00390000013989.b.f	ENSGT00940000164977.a.a	ENSGT00390000002548.j	ENSGT00940000155573.g.b.b	ENSGT00940000155478.hb.b.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b.e	ENSGT00950000182985.a.b.a.b	ENSGT01030000234613.b.b.h.a
Coho salmon	MODERN SPECIES	20	TECTA (ENSOKIG00005023526)	ENSOKIG00005023383	ENSOKIG00005023343	POLDIP2 (ENSOKIG00005023285)	LRRC75A (ENSOKIG00005023242)	CRK (ENSOKIG00005023227)	ENSOKIG00005023163	ENSOKIG00005023153	gria4b (ENSOKIG00005021164)	elmod1 (ENSOKIG00005020974)	CUL5 (ENSOKIG00005020220)	CAPN5 (ENSOKIG00005048805)	MYO7A (ENSOKIG00005047699)	GDPD4 (ENSOKIG00005047456)	ENSOKIG00005047437 #23	ENSOKIG00005047419 #22	ENSOKIG00005047410 #24	ENSOKIG00005047358	FCHSD2 (ENSOKIG00005047308)	ENSOKIG00005047283	plekhb1 (ENSOKIG00005047266)	ENSOKIG00005047257	crx (ENSOKIG00005047252)	nova1 (ENSOKIG00005047065)	ENSOKIG00005047032	zgc:153990 (ENSOKIG00005047028)	ENSOKIG00005047019	ENSOKIG00005047015	dlb (ENSOKIG00005047008)	ppp1r14aa (ENSOKIG00005046985)	ENSOKIG00005046979
Chinook salmon	MODERN SPECIES	23	TBCEL (ENSOTSG00005036631)	TECTA (ENSOTSG00005036633)	USP2 (ENSOTSG00005036637)	ENSOTSG00005036639	ENSOTSG00005036641	LRRC75A (ENSOTSG00005036645)	ENSOTSG00005036649	ywhae2 (ENSOTSG00005036653)	gria4b (ENSOTSG00005036677)	elmod1 (ENSOTSG00005038210)	CUL5 (ENSOTSG00005038212)	CAPN5 (ENSOTSG00005038217)	ENSOTSG00005038291	MYO7A (ENSOTSG00005038307)	GDPD4 (ENSOTSG00005038471)	ENSOTSG00005038473 #22	ENSOTSG00005038474 #23	ENSOTSG00005038476 #24	ENSOTSG00005038482	FCHSD2 (ENSOTSG00005038485)	fam168a (ENSOTSG00005038579)	plekhb1 (ENSOTSG00005038581)	ENSOTSG00005038582	kptn (ENSOTSG00005038591)	crx (ENSOTSG00005038635)	nova1 (ENSOTSG00005038637)	ENSOTSG00005038639	zgc:153990 (ENSOTSG00005038641)	ENSOTSG00005038643	dlb (ENSOTSG00005038647)	ppp1r14aa (ENSOTSG00005038653)
Rainbow trout	MODERN SPECIES	1	ENSOMYG00000034836	ENSOMYG00000034858	ENSOMYG00000034867	ENSOMYG00000034898	ENSOMYG00000034951	ENSOMYG00000001569	ENSOMYG00000001718	gria4b (ENSOMYG00000002271)	ENSOMYG00000002427	elmod1 (ENSOMYG00000072212)	ENSOMYG00000002671	CAPN5 (ENSOMYG00000002761)	MYO7A (ENSOMYG00000004362)	GDPD4 (ENSOMYG00000005865)	ENSOMYG00000060615	ENSOMYG00000005887 #22	ENSOMYG00000005939 #23	ENSOMYG00000005978 #24	ENSOMYG00000006097	ENSOMYG00000060501	ENSOMYG00000006287	ENSOMYG00000006448	ENSOMYG00000006490	ENSOMYG00000006507	ENSOMYG00000006535	nova1 (ENSOMYG00000006831)	ENSOMYG00000006889	zgc:153990 (ENSOMYG00000006899)	ENSOMYG00000006924	dlb (ENSOMYG00000006961)	CKM (ENSOMYG00000007272)
Salmo	ANCESTRAL SPECIES	17	ENSGT00530000063405.b.f.e	ENSGT00950000183155.a.a.a.b.c	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00390000009497.a.c	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a #22	ENSGT00390000010063.pb #23	ENSGT00530000064411.b.e #24	ENSGT00390000008610.a.b.b.a.a.b	ENSGT00510000046732.A.c.q	ENSGT00390000005140.a.o.a	ENSGT00390000013989.b.f	ENSGT01100000263504.a.b.b.a.b.tb	ENSGT00940000164977.a.a	ENSGT00390000002548.j	ENSGT00940000155573.g.b.b	ENSGT00990000213120	ENSGT00940000155478.hb.b.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b.e
River trout	MODERN SPECIES	10	TBCEL (ENSSTUG00000041639)	TECTA (ENSSTUG00000041688)	ENSSTUG00000042512	ENSSTUG00000042599	ENSSTUG00000042615	POLDIP2 (ENSSTUG00000042758)	ENSSTUG00000042909	ywhae2 (ENSSTUG00000042940)	gria4b (ENSSTUG00000043268)	elmod1 (ENSSTUG00000044172)	CUL5 (ENSSTUG00000044214)	CAPN5 (ENSSTUG00000044359)	ompb (ENSSTUG00000044427)	MYO7A (ENSSTUG00000044508)	ENSSTUG00000046332	ENSSTUG00000046345 #22	ENSSTUG00000046355 #23	ENSSTUG00000046383 #24	ENSSTUG00000046392	FCHSD2 (ENSSTUG00000046420)	fam168a (ENSSTUG00000046495)	plekhb1 (ENSSTUG00000046511)	ENSSTUG00000046520	crx (ENSSTUG00000046524)	kptn (ENSSTUG00000046541)	nova1 (ENSSTUG00000046672)	ENSSTUG00000046696	CAPNS1 (ENSSTUG00000046718)	zgc:153990 (ENSSTUG00000046722)	ENSSTUG00000046727	ENSSTUG00000046731
Atlantic salmon	MODERN SPECIES	23	ENSSSAG00000120351	ENSSSAG00000116408	ENSSSAG00000080079	ENSSSAG00000105016	ENSSSAG00000095358	gria4b (ENSSSAG00000104085)	ENSSSAG00000108261	ENSSSAG00000001489	ENSSSAG00000116155	ompb (ENSSSAG00000001217)	CAPN5 (ENSSSAG00000119704)	MYO7A (ENSSSAG00000000855)	ENSSSAG00000117321	GDPD4 (ENSSSAG00000000716)	ENSSSAG00000000693 #23	ENSSSAG00000099308 #22	ENSSSAG00000118846 #24	ENSSSAG00000000673	ENSSSAG00000000620	ENSSSAG00000107897	fam168a (ENSSSAG00000000571)	h3f3a (ENSSSAG00000076232)	ENSSSAG00000101243	ENSSSAG00000076024	ENSSSAG00000075999	nova1 (ENSSSAG00000076005)	ENSSSAG00000075994	zgc:153990 (ENSSSAG00000108819)	ENSSSAG00000075989	dlb (ENSSSAG00000063795)	ppp1r14aa (ENSSSAG00000086720)
Northern pike	MODERN SPECIES	6	TECTA (ENSELUG00000018390)	ENSELUG00000018327	ENSELUG00000018288	ENSELUG00000018240	POLDIP2 (ENSELUG00000018214)	CRK (ENSELUG00000018178)	ENSELUG00000018168	gria4b (ENSELUG00000018146)	elmod1 (ENSELUG00000018104)	slc35f2 (ENSELUG00000018044)	CUL5 (ENSELUG00000018014)	ompb (ENSELUG00000017884)	CAPN5 (ENSELUG00000017917)	MYO7A (ENSELUG00000017865)	GDPD4 (ENSELUG00000017779)	ENSELUG00000017744 #22	ENSELUG00000017721 #23	ENSELUG00000033123	ENSELUG00000001307 #24	ENSELUG00000017575	FCHSD2 (ENSELUG00000017539)	fam168a (ENSELUG00000000682)	ENSELUG00000025385	ENSELUG00000017446	crx (ENSELUG00000017439)	kptn (ENSELUG00000017416)	nova1 (ENSELUG00000017375)	alkbh6 (ENSELUG00000017352)	capns1a (ENSELUG00000017326)	zgc:153990 (ENSELUG00000017267)	ENSELUG00000017247
Otomorpha	ANCESTRAL SPECIES																	ENSGT00530000063816.c.a #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00530000063816.c.a #22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00530000063816.c.a #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00530000063816.c.a #22
Characoidei	ANCESTRAL SPECIES	78	ENSGT00950000182815.a.a.a.a.a.c.b	ENSGT00940000155919.b.b	ENSGT00940000155292.db.b	ENSGT01100000263502.B.a.b.a	ENSGT01100000263502.B.a.b.b	ENSGT00950000182993.A.b.f	ENSGT00940000158504	ENSGT00950000182993.A.b.e	ENSGT00390000015433	ENSGT00800000124150	ENSGT00730000112225	ENSGT00390000016532	ENSGT00390000010427.c	ENSGT00940000155464.a.a	ENSGT00940000161387	ENSGT00530000063816.c.a #22	ENSGT00530000064411.b #24	ENSGT00940000165592.b	ENSGT00940000159524	ENSGT00940000158090	ENSGT00390000012955	ENSGT00940000154769	ENSGT00390000013989.b	ENSGT00390000005140.a	ENSGT00510000046732.A.c	ENSGT00940000155599.i.b	ENSGT00940000155599.i.a.b	ENSGT00940000155713	ENSGT00940000156995.b
Red-bellied piranha	MODERN SPECIES	132	im:7159173 (ENSPNAG00000006840)	ENSPNAG00000006751	ENSPNAG00000029184	dscama (ENSPNAG00000029162)	mmp30 (ENSPNAG00000028946)	ENSPNAG00000028880	MMP1 (ENSPNAG00000028859)	ENSPNAG00000005687	ENSPNAG00000004356	MMP1 (ENSPNAG00000028112)	MMP1 (ENSPNAG00000028037)	ENSPNAG00000027971	acer3 (ENSPNAG00000027832)	TSKU (ENSPNAG00000027809)	ENSPNAG00000006784	ENSPNAG00000027775 #22	ENSPNAG00000027765 #23	ENSPNAG00000005477 #24	ucp3 (ENSPNAG00000027652)	ucp2 (ENSPNAG00000006067)	dnajb13 (ENSPNAG00000004242)	mrpl48 (ENSPNAG00000027512)	ENSPNAG00000005519	plekhb1 (ENSPNAG00000005163)	fam168a (ENSPNAG00000004213)	FCHSD2 (ENSPNAG00000027281)	dhrs13a.2 (ENSPNAG00000027267)	dhrs13a.1 (ENSPNAG00000004202)	ENSPNAG00000027235
Mexicana tetra	MODERN SPECIES	12	glis3 (ENSAMXG00000019181)	UNC5C (ENSAMXG00000007025)	bmpr1bb (ENSAMXG00000006998)	pdlim5b (ENSAMXG00000034634)	opn4xa (ENSAMXG00000006974)	EGFLAM (ENSAMXG00000006956)	gdnfa (ENSAMXG00000042733)	WDR70 (ENSAMXG00000006938)	ENSAMXG00000031985	ENSAMXG00000041226	nup155 (ENSAMXG00000006908)	nipblb (ENSAMXG00000006890)	slc1a3b (ENSAMXG00000000008)	ENSAMXG00000039562	ENSAMXG00000038184	ENSAMXG00000034583 #22	ENSAMXG00000033076 #23	RSF1 (ENSAMXG00000036069) #24	ENSAMXG00000041245	ucp3 (ENSAMXG00000035625)	ucp2 (ENSAMXG00000006822)	dnajb13 (ENSAMXG00000006806)	mrpl48 (ENSAMXG00000006784)	rab6a (ENSAMXG00000032547)	plekhb1 (ENSAMXG00000006760)	fam168a (ENSAMXG00000006758)	FCHSD2 (ENSAMXG00000006752)	dhrs13a.2 (ENSAMXG00000006741)	dhrs13a.1 (ENSAMXG00000038194)	PHF12 (ENSAMXG00000006728)	SEZ6 (ENSAMXG00000006718)
Neopterygii	ANCESTRAL SPECIES	50	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00940000159782	ENSGT00390000015655.a	ENSGT00940000165121	ENSGT00940000158132	ENSGT00390000018904	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497	ENSGT00940000156536.e.a	ENSGT00940000155350	ENSGT00940000156251	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411 #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.a	ENSGT00390000013989.b
Spotted gar	MODERN SPECIES	669	ENSLOCG00000006889	cwf19l2 (ENSLOCG00000006855)	ALKBH8 (ENSLOCG00000006833)	KBTBD3 (ENSLOCG00000006804)	elmod1 (ENSLOCG00000006784)	slc35f2 (ENSLOCG00000006766)	ENSLOCG00000006748	cul5a (ENSLOCG00000006732)	dcun1d5 (ENSLOCG00000006719)	ENSLOCG00000006704	ompa (ENSLOCG00000018219)	CAPN5 (ENSLOCG00000006677)	myo7aa (ENSLOCG00000006622)	GDPD4 (ENSLOCG00000006596)	pak1 (ENSLOCG00000006555)	aqp11 (ENSLOCG00000006538) #22	clns1a (ENSLOCG00000006519) #23	RSF1 (ENSLOCG00000006488) #24	aamdc (ENSLOCG00000006465) #25	INTS4 (ENSLOCG00000006446) #28	KCTD14 (ENSLOCG00000006426) #29	ENSLOCG00000006405	ENSLOCG00000006376	FCHSD2 (ENSLOCG00000006328)	P2RY2 (ENSLOCG00000018217)	ARHGEF17 (ENSLOCG00000006306)	relt (ENSLOCG00000006269)	fam168a (ENSLOCG00000006237)	plekhb1 (ENSLOCG00000006222)	rab6a (ENSLOCG00000006205)	mrpl48 (ENSLOCG00000006190)
Osteoglossocephalai	ANCESTRAL SPECIES	12	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a
Clupeocephala	ANCESTRAL SPECIES	10	ENSGT00940000158563	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000156648	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a #22	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a
Euteleosteomorpha	ANCESTRAL SPECIES	235						ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.b #24	ENSGT00940000165195	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a
Acanthomorphata	ANCESTRAL SPECIES	208						ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	119					ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a
Percomorphaceae	ANCESTRAL SPECIES	111						ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a
Percomorphaceae_B	ANCESTRAL SPECIES	25						ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000163467.a.b.b.a.a	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a
Ovalentaria	ANCESTRAL SPECIES	8	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a
Ovalentaria_B	ANCESTRAL SPECIES	11	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a.m
Cichlidae	ANCESTRAL SPECIES	21	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00940000159792.C	ENSGT00530000063950.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	19	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560.e.b	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00940000159792.C	ENSGT00530000063950.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	15	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610.h	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00940000159792.C	ENSGT00530000063950.a.b
Haplochromini	ANCESTRAL SPECIES	15	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610.h	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00990000204560.e.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00530000063950.a.b
Burton s mouthbrooder	MODERN SPECIES	824							ENSHBUG00000020853	ENSHBUG00000020868	ENSHBUG00000020883	FAM222B (ENSHBUG00000020899)	flot2b (ENSHBUG00000020937)	myo7aa (ENSHBUG00000022404)	GDPD4 (ENSHBUG00000022514)	pak1 (ENSHBUG00000022588)	ENSHBUG00000022620	aqp11 (ENSHBUG00000022625) #22	clns1a (ENSHBUG00000022647) #23	ENSHBUG00000022662
Haplochromini_A	ANCESTRAL SPECIES	23	ENSGT00980000198791.c	ENSGT00940000163630.A.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610.h	ENSGT00940000159610.g	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00530000063950.a.b	ENSGT00550000075007
P. nyererei	MODERN SPECIES	447																aqp11 (ENSPNYG00000021656) #22	clns1a (ENSPNYG00000021669) #23	rhbdd1 (ENSPNYG00000021695)	SLC35F2 (ENSPNYG00000021715)	CUL5 (ENSPNYG00000021735)	dcun1d5 (ENSPNYG00000021783)	CAPN5 (ENSPNYG00000021803)	ompa (ENSPNYG00000021817)	ENSPNYG00000021835	panx1a (ENSPNYG00000021838)	ENSPNYG00000021877	DMWD (ENSPNYG00000021885)	hif1al (ENSPNYG00000021897)	zgc:152863 (ENSPNYG00000021908)	ENSPNYG00000021913	ccdc9 (ENSPNYG00000021926)
Haplochromini_B	ANCESTRAL SPECIES	27	ENSGT00940000158344.a.a	ENSGT00980000198791.c	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610.h	ENSGT00940000159610.g	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00990000204560.e.b.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00530000063950.a.b	ENSGT00550000075007
Zebra mbuna	MODERN SPECIES	1096	ENSMZEG00005024576	med17 (ENSMZEG00005024570)	ech1 (ENSMZEG00005024557)	ech1 (ENSMZEG00005024551)	ENSMZEG00005024549	ENSMZEG00005024541	FAM222B (ENSMZEG00005024538)	flot2b (ENSMZEG00005024534)	myo7aa (ENSMZEG00005024525)	ENSMZEG00005024519	ENSMZEG00005024514	ENSMZEG00005024512	PAK1 (ENSMZEG00005024502)	ENSMZEG00005024493	ENSMZEG00005024489	aqp11 (ENSMZEG00005024487) #22	clns1a (ENSMZEG00005024486) #23	ENSMZEG00005024485	rhbdd1 (ENSMZEG00005024483)	SLC35F2 (ENSMZEG00005024481)	CUL5 (ENSMZEG00005024478)	dcun1d5 (ENSMZEG00005024475)	ompa (ENSMZEG00005024473)	CAPN5 (ENSMZEG00005024470)	panx1a (ENSMZEG00005024469)	ENSMZEG00005024463	DMWD (ENSMZEG00005024462)	hif1al (ENSMZEG00005024460)	zgc:152863 (ENSMZEG00005024458)	ENSMZEG00005024456	ccdc9 (ENSMZEG00005024453)
Eastern happy	MODERN SPECIES	5	med17 (ENSACLG00000015519)	ENSACLG00000015597	ech1 (ENSACLG00000015758)	ech1 (ENSACLG00000015797)	ENSACLG00000015823	ENSACLG00000015881	ENSACLG00000015899	ENSACLG00000015919	FAM222B (ENSACLG00000015970)	flot2b (ENSACLG00000015985)	myo7aa (ENSACLG00000016070)	ENSACLG00000016218	pak1 (ENSACLG00000016299)	ENSACLG00000016499	TUBA1B (ENSACLG00000016619)	aqp11 (ENSACLG00000016622) #22	clns1a (ENSACLG00000016637) #23	ENSACLG00000016657	ENSACLG00000016676	rhbdd1 (ENSACLG00000016679)	SLC35F2 (ENSACLG00000016705)	CUL5 (ENSACLG00000016737)	dcun1d5 (ENSACLG00000016814)	CAPN5 (ENSACLG00000016887)	ompa (ENSACLG00000016938)	panx1a (ENSACLG00000016951)	ENSACLG00000017048	DMWD (ENSACLG00000017242)	hif1al (ENSACLG00000017298)	zgc:152863 (ENSACLG00000017388)	ENSACLG00000017394
Lyretail cichlid	MODERN SPECIES	426																aqp11 (ENSNBRG00000015759) #22	clns1a (ENSNBRG00000015776) #23	SLC35F2 (ENSNBRG00000015825)	CUL5 (ENSNBRG00000015907)	ENSNBRG00000015948	ompa (ENSNBRG00000015957)	panx1a (ENSNBRG00000015971)	ENSNBRG00000016014	DMWD (ENSNBRG00000016057)	hif1al (ENSNBRG00000016073)	zgc:152863 (ENSNBRG00000016096)	ENSNBRG00000016107	ccdc9 (ENSNBRG00000016143)	ENSNBRG00000016288	sae1 (ENSNBRG00000016306)	ZC3H4 (ENSNBRG00000016333)
Nile tilapia	MODERN SPECIES	5	ENSONIG00000007777 #24	CAPN5 (ENSONIG00000007780)	ompa (ENSONIG00000027393)	dcun1d5 (ENSONIG00000007785)	CUL5 (ENSONIG00000007790)	SLC35F2 (ENSONIG00000007791)	rhbdd1 (ENSONIG00000007794)	ENSONIG00000029211	ENSONIG00000031889	ENSONIG00000033112	myo7aa (ENSONIG00000001401)	GDPD4 (ENSONIG00000001422)	pak1 (ENSONIG00000001430)	ENSONIG00000037197	ENSONIG00000030723	aqp11 (ENSONIG00000028778) #22	clns1a (ENSONIG00000017900) #23	ENSONIG00000042237	ENSONIG00000032173	flot2b (ENSONIG00000001396)	FAM222B (ENSONIG00000033941)	ENSONIG00000036315	ENSONIG00000027128	ENSONIG00000041162	ENSONIG00000034510	ENSONIG00000036242	ENSONIG00000034213	ENSONIG00000029177	ENSONIG00000001375	ech1 (ENSONIG00000035109)	ENSONIG00000030086
Midas cichlid	MODERN SPECIES	190								panx1a (ENSACIG00000017011)	CAPN5 (ENSACIG00000017053)	ompa (ENSACIG00000017078)	dcun1d5 (ENSACIG00000017085)	CUL5 (ENSACIG00000017101)	SLC35F2 (ENSACIG00000017127)	rhbdd1 (ENSACIG00000017141)	ENSACIG00000017154	aqp11 (ENSACIG00000017164) #22	clns1a (ENSACIG00000017174) #23	ENSACIG00000017189	pak1 (ENSACIG00000017196)	ENSACIG00000017217	myo7aa (ENSACIG00000017244)	flot2b (ENSACIG00000017310)	FAM222B (ENSACIG00000017328)	vps53 (ENSACIG00000017348)	rflnb (ENSACIG00000017384)	dus4l (ENSACIG00000017392)	bcap29 (ENSACIG00000017407)	slco1c1 (ENSACIG00000017469)	PDE3A (ENSACIG00000017495)	ENSACIG00000017525	AIPL1 (ENSACIG00000017554)
Pomacentridae	ANCESTRAL SPECIES	27	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a.l	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23
Pomacentridae_A	ANCESTRAL SPECIES	143	ENSGT00940000165978	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00940000158330	ENSGT00940000155604	ENSGT00940000171017	ENSGT00940000165563.b	ENSGT00390000004912
Amphiprion	ANCESTRAL SPECIES	97	ENSGT00940000165978	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00940000158330	ENSGT00940000155604	ENSGT00940000171017	ENSGT00940000165563.b	ENSGT00390000004912	ENSGT00390000016972	ENSGT00940000155470.b	ENSGT00940000160400	ENSGT01020000230608	ENSGT00950000182903.a.b.j	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000161729.n	ENSGT00730000111053
Orange clownfish	MODERN SPECIES	23	zgc:85932 (ENSAPEG00000017447)	ACTN4 (ENSAPEG00000017602)	ENSAPEG00000017671	slc8a2b (ENSAPEG00000017777)	srsf7a (ENSAPEG00000017818)	ENSAPEG00000017837	ENSAPEG00000017888	med17 (ENSAPEG00000017905)	ENSAPEG00000017954	ech1 (ENSAPEG00000017991)	FAM222B (ENSAPEG00000018015)	flot2b (ENSAPEG00000018024)	myo7aa (ENSAPEG00000018128)	GDPD4 (ENSAPEG00000018279)	pak1 (ENSAPEG00000018331)	aqp11 (ENSAPEG00000018404) #22	clns1a (ENSAPEG00000018416) #23	LRCH3 (ENSAPEG00000018498)	ABCF3 (ENSAPEG00000018567)	ENSAPEG00000018642	ENSAPEG00000018652	polr2d (ENSAPEG00000018714)	ENSAPEG00000018728	rpl35a (ENSAPEG00000018771)	abcc5 (ENSAPEG00000018801)	rnpepl1 (ENSAPEG00000018895)	ENSAPEG00000018951	ENSAPEG00000018966	ap2m1b (ENSAPEG00000019075)	mmp23bb (ENSAPEG00000019113)	zgc:92744 (ENSAPEG00000019137)
Clown anemonefish	MODERN SPECIES	1367																aqp11 (ENSAOCG00000007596) #22	clns1a (ENSAOCG00000000418) #23	ENSAOCG00000007529	LRCH3 (ENSAOCG00000007507)	ABCF3 (ENSAOCG00000007426)	ENSAOCG00000007356	ENSAOCG00000007342	polr2d (ENSAOCG00000007295)	rpl35a (ENSAOCG00000007269)	abcc5 (ENSAOCG00000007240)	rnpepl1 (ENSAOCG00000001967)	ENSAOCG00000007107	ENSAOCG00000007097	ap2m1b (ENSAOCG00000007028)	mmp23bb (ENSAOCG00000006964)	zgc:92744 (ENSAOCG00000006932)
Spiny chromis	MODERN SPECIES	1412														GDPD4 (ENSAPOG00000019718)	pak1 (ENSAPOG00000019704)	aqp11 (ENSAPOG00000019480) #22	clns1a (ENSAPOG00000019476) #23	ENSAPOG00000019425	ENSAPOG00000019257
Bicolor damselfish	MODERN SPECIES	1534														ENSSPAG00000013474	ENSSPAG00000013457	aqp11 (ENSSPAG00000013426) #22	clns1a (ENSSPAG00000013399) #23	polr2d (ENSSPAG00000013386)	ENSSPAG00000013290	ENSSPAG00000013269	ABCF3 (ENSSPAG00000013145)	LRCH3 (ENSSPAG00000013100)	rpl35a (ENSSPAG00000013060)	ENSSPAG00000013044	abcc5 (ENSSPAG00000012992)	rnpepl1 (ENSSPAG00000012958)	ENSSPAG00000012944	ENSSPAG00000012866	ap2m1b (ENSSPAG00000012833)	mmp23bb (ENSSPAG00000012793)
Atherinomorphae	ANCESTRAL SPECIES	15	ENSGT00940000165978	ENSGT00940000159343	ENSGT00940000158344.a.a	ENSGT00910000144115.b	ENSGT01030000234642.a.b.b.d.b.c.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00940000177932
Cyprinodontiformes	ANCESTRAL SPECIES	12	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00530000064359.c.a.n	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00940000177932
Aplocheiloidei	ANCESTRAL SPECIES	84												ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00940000160308	ENSGT00990000210326	ENSGT00390000007686.a	ENSGT00940000166085	ENSGT00940000166340	ENSGT00940000159792.C	ENSGT00530000063950.a.b
Mangrove rivulus	MODERN SPECIES	394											ENSKMAG00000016815	flot2b (ENSKMAG00000016841)	myo7aa (ENSKMAG00000016911)	GDPD4 (ENSKMAG00000017128)	pak1 (ENSKMAG00000017175)	aqp11 (ENSKMAG00000017249) #22	clns1a (ENSKMAG00000017291) #23	SLC35F2 (ENSKMAG00000017319)	CUL5 (ENSKMAG00000017341)	dcun1d5 (ENSKMAG00000017388)	CAPN5 (ENSKMAG00000017430)	ompa (ENSKMAG00000017479)	ENSKMAG00000017496 #24	panx1a (ENSKMAG00000017522)
Turquoise killifish	MODERN SPECIES	1615															pak1 (ENSNFUG00015008411)	AQP11 (ENSNFUG00015008418) #22	clns1a (ENSNFUG00015008422) #23	SLC35F2 (ENSNFUG00015008427)	ENSNFUG00015008438	DCUN1D5 (ENSNFUG00015008441)	OMPA (ENSNFUG00015008458)	ENSNFUG00015008462 #24	ENSNFUG00015008477	ENSNFUG00015008497	ENSNFUG00015008498	hif1al (ENSNFUG00015008507)	zgc:152863 (ENSNFUG00015008538)	pak4 (ENSNFUG00015008541)	ENSNFUG00015008547	ENSNFUG00015008550	ccdc9 (ENSNFUG00015008556)
Cyprinodontoidei	ANCESTRAL SPECIES	9	ENSGT00940000157823	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00940000177932
Poeciliinae	ANCESTRAL SPECIES	14	ENSGT00940000157823	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00390000015063	ENSGT00390000014682
Poecilia	ANCESTRAL SPECIES	2	ENSGT00940000157823	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00390000015063	ENSGT00390000014682
NAME_6	ANCESTRAL SPECIES	14	ENSGT00940000157823	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000005826.a.a	ENSGT00940000159112.b	ENSGT00940000159256.p	ENSGT00390000015063	ENSGT00390000014682
Sailfin molly	MODERN SPECIES	1063											ENSPLAG00000020158	myo7aa (ENSPLAG00000020549)	ENSPLAG00000020585	GDPD4 (ENSPLAG00000020635)	pak1 (ENSPLAG00000020697)	aqp11 (ENSPLAG00000020705) #22	ENSPLAG00000020715
Amazon molly	MODERN SPECIES	300	HNRNPUL1 (ENSPFOG00000014230)	opa3 (ENSPFOG00000014228)	ppp1r13l (ENSPFOG00000014217)	ENSPFOG00000014214	exosc5 (ENSPFOG00000014158)	aamdc (ENSPFOG00000014143) #25	INTS4 (ENSPFOG00000013927) #28	ENSPFOG00000023884	KCTD14 (ENSPFOG00000013871) #29	rps3 (ENSPFOG00000013835)	zgc:171927 (ENSPFOG00000013810)	ENSPFOG00000013806	myo7aa (ENSPFOG00000013226)	GDPD4 (ENSPFOG00000013040)	pak1 (ENSPFOG00000012810)	aqp11 (ENSPFOG00000012789) #22	clns1a (ENSPFOG00000012765) #23	SLC35F2 (ENSPFOG00000012711)	CUL5 (ENSPFOG00000012518)	dcun1d5 (ENSPFOG00000012446)	ompa (ENSPFOG00000012443)	CAPN5 (ENSPFOG00000012108)	ENSPFOG00000012002 #24	panx1a (ENSPFOG00000011966)	bckdha (ENSPFOG00000011923)	ENSPFOG00000020475	napab (ENSPFOG00000011869)	BICRA (ENSPFOG00000011821)	EHD2 (ENSPFOG00000011756)	nup88 (ENSPFOG00000011735)	psmd8 (ENSPFOG00000011698)
Guppy	MODERN SPECIES	443	HNRNPUL1 (ENSPREG00000017804)	opa3 (ENSPREG00000017788)	ppp1r13l (ENSPREG00000017741)	TMEM91 (ENSPREG00000017731)	exosc5 (ENSPREG00000017723)	aamdc (ENSPREG00000017651) #25	INTS4 (ENSPREG00000017623) #28	ENSPREG00000017611	KCTD14 (ENSPREG00000017593) #29	rps3 (ENSPREG00000017536)	zgc:171927 (ENSPREG00000017517)	ENSPREG00000017495	myo7aa (ENSPREG00000017413)	GDPD4 (ENSPREG00000017372)	pak1 (ENSPREG00000017333)	aqp11 (ENSPREG00000017322) #22	clns1a (ENSPREG00000017305) #23	SLC35F2 (ENSPREG00000017275)	CUL5 (ENSPREG00000017245)	dcun1d5 (ENSPREG00000017217)	ompa (ENSPREG00000017203)	CAPN5 (ENSPREG00000017184)	ENSPREG00000017168	panx1a (ENSPREG00000017142)	ENSPREG00000017119	prdm10 (ENSPREG00000017058)	ENSPREG00000017039	aplp2 (ENSPREG00000016991)	ENSPREG00000016523	dhx34 (ENSPREG00000016403)	spred3 (ENSPREG00000016378)
Platyfish	MODERN SPECIES	9	opa3 (ENSXMAG00000023043)	ppp1r13l (ENSXMAG00000004805)	ENSXMAG00000004802	exosc5 (ENSXMAG00000004786)	ENSXMAG00000022515	aamdc (ENSXMAG00000004784) #25	INTS4 (ENSXMAG00000004746) #28	ENSXMAG00000028328	KCTD14 (ENSXMAG00000027590) #29	rps3 (ENSXMAG00000004703)	zgc:171927 (ENSXMAG00000004683)	ENSXMAG00000004681	myo7aa (ENSXMAG00000004628)	GDPD4 (ENSXMAG00000029648)	pak1 (ENSXMAG00000004548)	aqp11 (ENSXMAG00000021051) #22	clns1a (ENSXMAG00000004537) #23	SLC35F2 (ENSXMAG00000004522)	CUL5 (ENSXMAG00000004486)	dcun1d5 (ENSXMAG00000004471)	panx1a (ENSXMAG00000004464)	ENSXMAG00000007014 #24	ompa (ENSXMAG00000029785)	CAPN5 (ENSXMAG00000006995)	ENSXMAG00000028342	ENSXMAG00000006987	flot2b (ENSXMAG00000006956)	FAM222B (ENSXMAG00000026087)	ENSXMAG00000006952	atp1b3b (ENSXMAG00000013010)	NYAP2 (ENSXMAG00000000867)
NAME_4	ANCESTRAL SPECIES	85	ENSGT01090000261501	ENSGT00390000009795	ENSGT00940000160551	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c.c	ENSGT00940000156155
Sheepshead minnow	MODERN SPECIES	457	ENSCVAG00000009437	opa3 (ENSCVAG00000009429)	ppp1r13l (ENSCVAG00000009418)	ENSCVAG00000009406	exosc5 (ENSCVAG00000009396)	aamdc (ENSCVAG00000009374) #25	INTS4 (ENSCVAG00000009362) #28	ENSCVAG00000009262	KCTD14 (ENSCVAG00000009254) #29	rps3 (ENSCVAG00000009247)	zgc:171927 (ENSCVAG00000009222)	ENSCVAG00000009207	myo7aa (ENSCVAG00000009198)	GDPD4 (ENSCVAG00000009074)	pak1 (ENSCVAG00000009047)	aqp11 (ENSCVAG00000009023) #22	clns1a (ENSCVAG00000009019) #23	SLC35F2 (ENSCVAG00000009002)	CUL5 (ENSCVAG00000008893)	dcun1d5 (ENSCVAG00000008851)	CAPN5 (ENSCVAG00000008810)	ompa (ENSCVAG00000008778)	ENSCVAG00000008764	panx1a (ENSCVAG00000008753)
Mummichog	MODERN SPECIES	533													myo7aa (ENSFHEG00000008196)	GDPD4 (ENSFHEG00000008205)	pak1 (ENSFHEG00000008225)	aqp11 (ENSFHEG00000008231) #22	clns1a (ENSFHEG00000000206) #23	ENSFHEG00000008260	CUL5 (ENSFHEG00000008268)	dcun1d5 (ENSFHEG00000008344)	ENSFHEG00000008403
Oryzias	ANCESTRAL SPECIES	8	ENSGT00940000175310	ENSGT00530000064411.a #24	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000156155	ENSGT00940000156648.c	ENSGT00940000166085	ENSGT00390000007686.a	ENSGT00940000160308	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000015655.a.m.a	ENSGT00940000165073.a.b.b.b.b	ENSGT00940000160509	ENSGT00940000168703	ENSGT00390000014810.a	ENSGT00940000156343.lb.a	ENSGT00950000183052.b.c.b.a.c.b	ENSGT00950000183052.b.c.b.a.c.a.a	ENSGT00940000159555.v.a	ENSGT00950000182772.A.a.a.b.r.b	ENSGT00940000167306	ENSGT00950000182970.C	ENSGT00940000165053	ENSGT00940000160011
Oryzias_b	ANCESTRAL SPECIES	14	ENSGT00530000064411.a #24	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000156155	ENSGT00940000156648.c	ENSGT00940000166085	ENSGT00390000007686.a	ENSGT00940000160308	ENSGT00940000158512.a.j	ENSGT00940000158512.a.i	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000015655.a.m.a
Indian medaka	MODERN SPECIES	12	CAPN5 (ENSOMEG00000001227)	ompa (ENSOMEG00000001224)	dcun1d5 (ENSOMEG00000001221)	CUL5 (ENSOMEG00000001217)	ENSOMEG00000001213	hif1al (ENSOMEG00000001208)	DMWD (ENSOMEG00000023807)	ENSOMEG00000023804	ENSOMEG00000023766	ENSOMEG00000023757	FAM222B (ENSOMEG00000023746)	flot2b (ENSOMEG00000023743)	myo7aa (ENSOMEG00000023739)	GDPD4 (ENSOMEG00000023712)	pak1 (ENSOMEG00000023697)	aqp11 (ENSOMEG00000023681) #22	clns1a (ENSOMEG00000023661) #23	SLC35F2 (ENSOMEG00000023501)	ENSOMEG00000023492	ENSOMEG00000023487	ENSOMEG00000023472	ENSOMEG00000023462	ENSOMEG00000023453	ENSOMEG00000023431	kcnk6 (ENSOMEG00000023404)	ENSOMEG00000023386	blvrb (ENSOMEG00000023374)	ENSOMEG00000023361	ENSOMEG00000023348	ENSOMEG00000023331	ENSOMEG00000023310
Javanese ricefish	MODERN SPECIES	4	CAPN5 (ENSOJAG00000005778)	ompa (ENSOJAG00000006859)	dcun1d5 (ENSOJAG00000006865)	cul5a (ENSOJAG00000006958)	hif1al (ENSOJAG00000007882)	DMWD (ENSOJAG00000008302)	ENSOJAG00000008332	ENSOJAG00000008591	ENSOJAG00000008771	FAM222B (ENSOJAG00000008924)	flot2b (ENSOJAG00000008968)	myo7aa (ENSOJAG00000009540)	GDPD4 (ENSOJAG00000010079)	ENSOJAG00000010095	pak1 (ENSOJAG00000010240)	aqp11 (ENSOJAG00000011818) #22	clns1a (ENSOJAG00000011826) #23	SLC35F2 (ENSOJAG00000011835)	ENSOJAG00000011871	ENSOJAG00000011921	ENSOJAG00000011930	ENSOJAG00000011934	kcnk6 (ENSOJAG00000011948)	ENSOJAG00000011954	blvrb (ENSOJAG00000011961)	ENSOJAG00000012466	ENSOJAG00000012494	ENSOJAG00000012519	MARK4 (ENSOJAG00000012712)	CKM (ENSOJAG00000014807)	ercc2 (ENSOJAG00000015767)
Oryzias_a	ANCESTRAL SPECIES	8	ENSGT00940000153972.A.a	ENSGT00530000064411.a #24	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000156155	ENSGT00940000156648.c	ENSGT00940000166085	ENSGT00390000007686.a	ENSGT00940000160308	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00390000015655.a.m.a	ENSGT00940000165073.a.b.b.b.b	ENSGT00940000160509	ENSGT00940000168703	ENSGT00390000014810.a	ENSGT00950000183052.b.c.b.a.c.b	ENSGT00950000183052.b.c.b.a.c.a.a	ENSGT00940000159555.v.a	ENSGT01070000253869	ENSGT00950000182772.A.a.a.b.r.b	ENSGT00940000167306	ENSGT00950000182970.C	ENSGT00940000165053	ENSGT00940000160011
Japanese Medaka HdrR	MODERN SPECIES	4	PANX (ENSORLG00000002140)	ENSORLG00000002117 #24	ompa (ENSORLG00000029919)	CAPN5 (ENSORLG00000002081)	dcun1d5 (ENSORLG00000002056)	CUL5 (ENSORLG00000002038)	hif1al (ENSORLG00000002004)	DMWD (ENSORLG00000023682)	ENSORLG00000001987	ENSORLG00000029342	ENSORLG00000001959	ENSORLG00000001952	myo7aa (ENSORLG00000001941)	GDPD4 (ENSORLG00000001876)	pak1 (ENSORLG00000001860)	aqp11 (ENSORLG00000028601) #22	clns1a (ENSORLG00000001811) #23	ENSORLG00000001787	ENSORLG00000028971	ENSORLG00000001764	kcnk6 (ENSORLG00000001728)	ENSORLG00000025193	ENSORLG00000025195	ENSORLG00000001689	ENSORLG00000025963	ENSORLG00000022704	ENSORLG00000001615	ENSORLG00000001611	CKM (ENSORLG00000030295)	klc3 (ENSORLG00000001581)	ercc2 (ENSORLG00000001570)
Chinese medaka	MODERN SPECIES	538	panx1a (ENSOSIG00000003822)	ENSOSIG00000003765 #24	ompa (ENSOSIG00000017825)	CAPN5 (ENSOSIG00000017328)	dcun1d5 (ENSOSIG00000017311)	cul5a (ENSOSIG00000017293)	hif1al (ENSOSIG00000017162)	DMWD (ENSOSIG00000017148)	ENSOSIG00000017144	ENSOSIG00000017028	FAM222B (ENSOSIG00000017014)	flot2b (ENSOSIG00000017009)	myo7aa (ENSOSIG00000015631)	GDPD4 (ENSOSIG00000015583)	pak1 (ENSOSIG00000015442)	aqp11 (ENSOSIG00000015427) #22	clns1a (ENSOSIG00000015425) #23	SLC35F2 (ENSOSIG00000015424)	ENSOSIG00000015421	kcnk6 (ENSOSIG00000015414)	ENSOSIG00000015412	blvrb (ENSOSIG00000015409)	ENSOSIG00000015396	MARK4 (ENSOSIG00000015171)	ENSOSIG00000015170	CKM (ENSOSIG00000015130)	klc3 (ENSOSIG00000013862)	ercc2 (ENSOSIG00000013851)	zgc:154093 (ENSOSIG00000013850)	sae1 (ENSOSIG00000013848)	ccdc9 (ENSOSIG00000013846)
Percomorphaceae_C	ANCESTRAL SPECIES	9	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000155987.b
Percomorphaceae_D	ANCESTRAL SPECIES	9	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00450000040324.a.a.b
Anabantaria	ANCESTRAL SPECIES	9	ENSGT00940000159610	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00450000040324.a.a.b	ENSGT00950000182843.a.a.a.b.a.b
Anabantoidei	ANCESTRAL SPECIES	29					ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00450000040324.a.a.b	ENSGT00950000182843.a.a.a.b.a.b
Climbing perch	MODERN SPECIES	4	ENSATEG00000004576	ENSATEG00000004510	ENSATEG00000004466	ENSATEG00000004449	ENSATEG00000029022	ENSATEG00000004378	ENSATEG00000004344	ENSATEG00000004310	ENSATEG00000004237	dcun1d5 (ENSATEG00000004210)	ompa (ENSATEG00000004196)	CAPN5 (ENSATEG00000004124)	myo7aa (ENSATEG00000003932)	GDPD4 (ENSATEG00000003826)	pak1 (ENSATEG00000003807)	aqp11 (ENSATEG00000030022) #22	clns1a (ENSATEG00000003771) #23	ENSATEG00000003745 #24	ENSATEG00000003736	ENSATEG00000003698	aamdc (ENSATEG00000003660) #25	ENSATEG00000003556 #28	ENSATEG00000003549	KCTD14 (ENSATEG00000003545) #29	rps3 (ENSATEG00000003502)	ENSATEG00000003476	ENSATEG00000003462	ENSATEG00000003430	ENSATEG00000003410	ENSATEG00000029865	si:cabz01090165.1 (ENSATEG00000003302)
Siamese fighting fish	MODERN SPECIES	4	hnrnpl2 (ENSBSLG00000015246)	ech1 (ENSBSLG00000015752)	ENSBSLG00000016117	med17 (ENSBSLG00000016138)	ENSBSLG00000016181	dcun1d5 (ENSBSLG00000016189)	CUL5 (ENSBSLG00000016205)	SLC35F2 (ENSBSLG00000016327)	flot2b (ENSBSLG00000016335)	FAM222B (ENSBSLG00000016394)	CAPN5 (ENSBSLG00000016398)	ompa (ENSBSLG00000016442)	GDPD4 (ENSBSLG00000016520)	ENSBSLG00000016531	pak1 (ENSBSLG00000016540)	aqp11 (ENSBSLG00000017677) #22
Zig-zag eel	MODERN SPECIES	4	ENSMAMG00000017237	ENSMAMG00000017227	ENSMAMG00000017250	ENSMAMG00000028672	ENSMAMG00000017314	ENSMAMG00000017320	ENSMAMG00000017352	ENSMAMG00000017414	dcun1d5 (ENSMAMG00000026934)	ENSMAMG00000017488	ompa (ENSMAMG00000017510)	myo7aa (ENSMAMG00000017522)	GDPD4 (ENSMAMG00000017991)	pak1 (ENSMAMG00000018022)	ENSMAMG00000018060	aqp11 (ENSMAMG00000018089) #22	clns1a (ENSMAMG00000018069) #23	ENSMAMG00000018095 #24	ENSMAMG00000018108	ENSMAMG00000018111	ENSMAMG00000018117	ENSMAMG00000028396	ENSMAMG00000026761	ENSMAMG00000018154	ENSMAMG00000018182	ENSMAMG00000018253	ENSMAMG00000018262	ENSMAMG00000025327	ENSMAMG00000018275	ENSMAMG00000018290	ENSMAMG00000018356
Carangaria	ANCESTRAL SPECIES	8	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00450000040324.a.a.b
Pleuronectoidei	ANCESTRAL SPECIES	35	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a
Turbot	MODERN SPECIES	15	farsb (ENSSMAG00000020668)	acsl3a (ENSSMAG00000020663)	kcne4 (ENSSMAG00000020661)	ENSSMAG00000020660	dhrs12la (ENSSMAG00000020608)	wdfy1 (ENSSMAG00000020603)	serpine2 (ENSSMAG00000020601)	prss16 (ENSSMAG00000020598)	ENSSMAG00000020589	ENSSMAG00000020563	ompa (ENSSMAG00000033320)	CAPN5 (ENSSMAG00000020557)	myo7aa (ENSSMAG00000020546)	ENSSMAG00000020537	pak1 (ENSSMAG00000020499)	aqp11 (ENSSMAG00000020497) #22	clns1a (ENSSMAG00000020496) #23	ENSSMAG00000020495 #24	gmps (ENSSMAG00000020489)	ENSSMAG00000020488	kcnab1a (ENSSMAG00000020485)	ssr3 (ENSSMAG00000023871)	TIPARP (ENSSMAG00000020479)	ENSSMAG00000022648	ENSSMAG00000029670	ENSSMAG00000020476	PTX3 (ENSSMAG00000020473)	ENSSMAG00000020466	ENSSMAG00000020463	ENSSMAG00000020457	ENSSMAG00000029459
Tongue sole	MODERN SPECIES	14	ech1 (ENSCSEG00000006411)	med17 (ENSCSEG00000006452)	ENSCSEG00000006458	ENSCSEG00000006465	ENSCSEG00000006476	FAM222B (ENSCSEG00000006481)	flot2b (ENSCSEG00000006488)	SLC35F2 (ENSCSEG00000006494)	CUL5 (ENSCSEG00000006499)	dcun1d5 (ENSCSEG00000006513)	CAPN5 (ENSCSEG00000006517)	ompa (ENSCSEG00000006525)	myo7aa (ENSCSEG00000006533)	GDPD4 (ENSCSEG00000006568)	pak1 (ENSCSEG00000006576)	aqp11 (ENSCSEG00000006605) #22	clns1a (ENSCSEG00000006611) #23	ENSCSEG00000006620	panx1a (ENSCSEG00000006624)	spsb4a (ENSCSEG00000006639)	SLC25A36 (ENSCSEG00000006649)	pxylp1 (ENSCSEG00000006664)	epha4a (ENSCSEG00000006677)	cntn5 (ENSCSEG00000006697)	ARHGAP42 (ENSCSEG00000006717)	ENSCSEG00000006789	pgr (ENSCSEG00000006795)	trpc6a (ENSCSEG00000006802)	ENSCSEG00000006815	NECTIN1 (ENSCSEG00000006820)	ttc36 (ENSCSEG00000006840)
Carangaria_A	ANCESTRAL SPECIES	10	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00990000204173	ENSGT00940000163299.B.b.b.h.c.a
Seriola	ANCESTRAL SPECIES	38	ENSGT00940000159610	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000175310	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000163467.a.b.b.a.a.h.a	ENSGT00940000164973	ENSGT00990000204173
Yellowtail amberjack	MODERN SPECIES	2532													ENSSLDG00000021851	GDPD4 (ENSSLDG00000021835)	pak1 (ENSSLDG00000021823)	aqp11 (ENSSLDG00000021807) #22	clns1a (ENSSLDG00000021796) #23
Greater amberjack	MODERN SPECIES	14	med17 (ENSSDUG00000003561)	ENSSDUG00000003588	ENSSDUG00000003610	FAM222B (ENSSDUG00000003635)	flot2b (ENSSDUG00000003641)	rhbdd1 (ENSSDUG00000003679)	SLC35F2 (ENSSDUG00000003696)	CUL5 (ENSSDUG00000003721)	dcun1d5 (ENSSDUG00000003755)	CAPN5 (ENSSDUG00000003779)	ompa (ENSSDUG00000003820)	ENSSDUG00000003826	myo7aa (ENSSDUG00000003850)	GDPD4 (ENSSDUG00000003964)	pak1 (ENSSDUG00000003997)	aqp11 (ENSSDUG00000004063) #22	clns1a (ENSSDUG00000004087) #23	RSF1 (ENSSDUG00000004112) #24	ENSSDUG00000004129	panx1a (ENSSDUG00000004139)	aamdc (ENSSDUG00000004148) #25	INTS4 (ENSSDUG00000004164) #28	KCTD14 (ENSSDUG00000004288) #29	rps3 (ENSSDUG00000004327)	ENSSDUG00000004417	ENSSDUG00000004426	zgc:171927 (ENSSDUG00000004445)	ENSSDUG00000004465	ENSSDUG00000004486	si:cabz01090165.1 (ENSSDUG00000004519)	ENSSDUG00000004681
Barramundi perch	MODERN SPECIES	59															pak1 (ENSLCAG00010023183)	aqp11 (ENSLCAG00010023196) #22	clns1a (ENSLCAG00010023198) #23	panx1a (ENSLCAG00010023208)	aamdc (ENSLCAG00010023212) #25	INTS4 (ENSLCAG00010023228) #28	ENSLCAG00010023233	ITM2C (ENSLCAG00010023241)	lpar5b (ENSLCAG00010023244)	ENSLCAG00010023246	ENSLCAG00010023250	meis3 (ENSLCAG00010023261)	mvp (ENSLCAG00010023292)	CASKIN2 (ENSLCAG00010023315)	ST6GALNAC2 (ENSLCAG00010023319)	si:ch73-366l1.5 (ENSLCAG00010023323)	jmjd6 (ENSLCAG00010023324)
Eupercaria	ANCESTRAL SPECIES	7	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000155987.b	ENSGT00450000040324.a.a.b
Tetraodontidae	ANCESTRAL SPECIES	115																ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00390000015655.a.m.a	ENSGT00560000077232.B.g.a	ENSGT00530000063811.A.a.b	ENSGT00940000158512.a	ENSGT00970000193454	ENSGT00390000011810
Fugu	MODERN SPECIES	2	igsf11 (ENSTRUG00000010310)	ENSTRUG00000021402	GIT1 (ENSTRUG00000009923)	ankrd13b (ENSTRUG00000021746)	slc6a4a (ENSTRUG00000008917)	blmh (ENSTRUG00000008761)	fat3a (ENSTRUG00000008334)	ENSTRUG00000020398	hspa13 (ENSTRUG00000022313)	ENSTRUG00000025749	MMP28 (ENSTRUG00000020202)	taf15 (ENSTRUG00000007798)	porb (ENSTRUG00000007436)	tmem120ab (ENSTRUG00000007407)	gdpd1 (ENSTRUG00000007222)	aqp11 (ENSTRUG00000007188) #22	clns1a (ENSTRUG00000007089) #23	ENSTRUG00000006905 #24	panx1a (ENSTRUG00000006765)	aamdc (ENSTRUG00000021092) #25	INTS4 (ENSTRUG00000006471) #28	nccrp1 (ENSTRUG00000022576)	KCTD14 (ENSTRUG00000022906) #29	rps3 (ENSTRUG00000023549)	CAPN5 (ENSTRUG00000005683)	ompa (ENSTRUG00000006040)	SLC35F2 (ENSTRUG00000005526)	flot2b (ENSTRUG00000005208)	FAM222B (ENSTRUG00000005106)	ENSTRUG00000004689	ENSTRUG00000028563
Eupecaria_A	ANCESTRAL SPECIES	9	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000155987.b	ENSGT00450000040324.a.a.b
Ballan wrasse	MODERN SPECIES	200		hif1al (ENSLBEG00000010994)	zgc:152863 (ENSLBEG00000010953)	pak4 (ENSLBEG00000010883)	ccdc9 (ENSLBEG00000010829)	sae1 (ENSLBEG00000010775)	ZC3H4 (ENSLBEG00000010735)	zgc:154093 (ENSLBEG00000010700)	ercc2 (ENSLBEG00000010573)	klc3 (ENSLBEG00000010476)	CKM (ENSLBEG00000010410)	MARK4 (ENSLBEG00000010272)	myo7aa (ENSLBEG00000010075)	GDPD4 (ENSLBEG00000009985)	pak1 (ENSLBEG00000009841)	aqp11 (ENSLBEG00000009767) #22	clns1a (ENSLBEG00000009737) #23	ENSLBEG00000009701 #24	panx1a (ENSLBEG00000009670)	ENSLBEG00000009526	med17 (ENSLBEG00000009459)	ech1 (ENSLBEG00000009395)	ENSLBEG00000009182	FAM222B (ENSLBEG00000009142)	flot2b (ENSLBEG00000009104)	rhbdd1 (ENSLBEG00000008984)	SLC35F2 (ENSLBEG00000008933)	CUL5 (ENSLBEG00000008869)	dcun1d5 (ENSLBEG00000008824)	ompa (ENSLBEG00000008803)	CAPN5 (ENSLBEG00000008778)
Eupecaria_B	ANCESTRAL SPECIES	9	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000155987.b	ENSGT00450000040324.a.a.b
Eupecaria_C	ANCESTRAL SPECIES	7	ENSGT00670000099420	ENSGT00940000156844.a	ENSGT00940000155478.ib	ENSGT00950000182843.a.a.a.b.a.b	ENSGT00450000040324.a.a.b	ENSGT00940000155987.b	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000164973	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00530000064359.c.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00990000204560.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000156648.c	ENSGT00390000015655.a.m.a	ENSGT00390000010744.m.d	ENSGT00560000077232.B.g.a
Gilthead seabream	MODERN SPECIES	11	RFFL (ENSSAUG00010003058)	eif4h (ENSSAUG00010003080)	ANO7 (ENSSAUG00010003089)	ece2b (ENSSAUG00010003155)	zgc:171927 (ENSSAUG00010003564)	ENSSAUG00010003567	ENSSAUG00010003573	ENSSAUG00010003576	ENSSAUG00010003578	ENSSAUG00010003580	myo7aa (ENSSAUG00010003617)	ENSSAUG00010004943	pak1 (ENSSAUG00010004958)	rhbdd1 (ENSSAUG00010005118)	ENSSAUG00010005122	aqp11 (ENSSAUG00010005126) #22	clns1a (ENSSAUG00010005127) #23	RSF1 (ENSSAUG00010005129) #24	panx1a (ENSSAUG00010005133)	aamdc (ENSSAUG00010005135) #25	INTS4 (ENSSAUG00010005143) #28	ENSSAUG00010005556	KCTD14 (ENSSAUG00010005558) #29	rps3 (ENSSAUG00010005562)	dcun1d5 (ENSSAUG00010005671)	CAPN5 (ENSSAUG00010005676)	ompa (ENSSAUG00010005720)	ENSSAUG00010005721	CUL5 (ENSSAUG00010005742)	SLC35F2 (ENSSAUG00010006242)	ENSSAUG00010006244
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	5	ENSGT01000000214804	ENSGT00940000174800	ENSGT00670000099420	ENSGT00940000156844.a	ENSGT00940000155478.ib	ENSGT00950000182843.a.a.a.b.a.b	ENSGT00450000040324.a.a.b	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00940000164973	ENSGT00940000167295	ENSGT00940000155076.b.a.a.b	ENSGT00530000064359.c.a	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b	ENSGT00940000156648.c	ENSGT00390000015655.a.m.a	ENSGT00390000010744.m.d	ENSGT00560000077232.B.g.a
European seabass	MODERN SPECIES	3	ENSDLAG00005012380	si:cabz01090165.1 (ENSDLAG00005012353)	ENSDLAG00005034310	ENSDLAG00005034071	ENSDLAG00005030844	ENSDLAG00005012104	ENSDLAG00005012093	ENSDLAG00005034976	ENSDLAG00005028926	myo7aa (ENSDLAG00005007604)	GDPD4 (ENSDLAG00005007565)	pak1 (ENSDLAG00005007216)	ENSDLAG00005015787	ENSDLAG00005006820	ENSDLAG00005003383	aqp11 (ENSDLAG00005031387) #22	clns1a (ENSDLAG00005032077) #23	ENSDLAG00005030366	RSF1 (ENSDLAG00005007153) #24	ENSDLAG00005007136	ENSDLAG00005006323 #28	ENSDLAG00005006285	ENSDLAG00005006256	KCTD14 (ENSDLAG00005006243) #29	rps3 (ENSDLAG00005006114)	ENSDLAG00005006108	ENSDLAG00005006082	ENSDLAG00005031445	ENSDLAG00005032013	ENSDLAG00005005420	ENSDLAG00005005085
Large yellow croaker	MODERN SPECIES	479	dharma (ENSLCRG00005008144)	ENSLCRG00005008141	ENSLCRG00005008139	zgc:162698 (ENSLCRG00005008138)	CAPNS1 (ENSLCRG00005008137)	zgc:101731 (ENSLCRG00005008136)	ENSLCRG00005008134	ENSLCRG00005008132	ENSLCRG00005008130	ENSLCRG00005008128	zgc:171927 (ENSLCRG00005008127)	ENSLCRG00005008126	myo7aa (ENSLCRG00005004902)	GDPD4 (ENSLCRG00005004869)	pak1 (ENSLCRG00005004795)	aqp11 (ENSLCRG00005004785) #22	clns1a (ENSLCRG00005004782) #23	panx1a (ENSLCRG00005004777)	INTS4 (ENSLCRG00005003790) #28	ENSLCRG00005003764	KCTD14 (ENSLCRG00005003749) #29	rps3 (ENSLCRG00005003658)	ENSLCRG00005003655	ENSLCRG00005003654	dcun1d5 (ENSLCRG00005003651)	ompa (ENSLCRG00005003649)	CAPN5 (ENSLCRG00005002764)	CUL5 (ENSLCRG00005002641)	SLC35F2 (ENSLCRG00005002621)	ENSLCRG00005002565	rhbdd1 (ENSLCRG00005002545)
Perciformes	ANCESTRAL SPECIES	10	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b.d	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000163299.B.b.b.h.c.a	ENSGT00450000040324.a.a.b	ENSGT00950000182843.a.a.a.b.a.b
Cottioidei	ANCESTRAL SPECIES	4	ENSGT00390000008610.a.a	ENSGT00940000160762 #29	ENSGT00940000174101	ENSGT00390000010128 #28	ENSGT00390000011958 #25	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b.d	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00940000153972.A.a	ENSGT00970000193454	ENSGT00390000011810	ENSGT00940000153123.A	ENSGT00940000159610	ENSGT00940000166085	ENSGT00390000007686.a	ENSGT00940000160308	ENSGT00390000009409	ENSGT00940000165978	ENSGT00940000159343	ENSGT00390000018436.b	ENSGT00940000158344.a.a	ENSGT00910000144115.b
Lumpfish	MODERN SPECIES	17	aamdc (ENSCLMG00005006752) #25	INTS4 (ENSCLMG00005006751) #28	ENSCLMG00005006749	KCTD14 (ENSCLMG00005006747) #29	rps3 (ENSCLMG00005006563)	FAM222B (ENSCLMG00005006558)	FLOT2 (ENSCLMG00005006552)	SLC35F2 (ENSCLMG00005006549)	CUL5 (ENSCLMG00005006228)	dcun1d5 (ENSCLMG00005006221)	CAPN5 (ENSCLMG00005005886)	ompa (ENSCLMG00005005874)	myo7aa (ENSCLMG00005005767)	GDPD4 (ENSCLMG00005005762)	pak1 (ENSCLMG00005005574)	aqp11 (ENSCLMG00005005571) #22	clns1a (ENSCLMG00005005569) #23	panx1a (ENSCLMG00005005567)	ENSCLMG00005005561	ENSCLMG00005005535	ENSCLMG00005005532	ENSCLMG00005005530	ENSCLMG00005005528	ENSCLMG00005005526	ENSCLMG00005005517	med17 (ENSCLMG00005005498)	ENSCLMG00005005491	ech1 (ENSCLMG00005005418)	hif1al (ENSCLMG00005004934)	DMWD (ENSCLMG00005004908)	MAP4K1 (ENSCLMG00005004901)
Perciformes_a	ANCESTRAL SPECIES	9	ENSGT00940000153123.A	ENSGT00390000011810	ENSGT00970000193454	ENSGT00940000158512.a	ENSGT00530000063811.A.a.b	ENSGT00560000077232.B.g.a	ENSGT00390000010744.m.d	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.b.d	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00940000153972.A.a	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000174101	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00530000064359.c.a	ENSGT00940000155076.b.a.a.b	ENSGT00940000167295	ENSGT00940000164973	ENSGT00940000174501	ENSGT00450000040324.a.a.b	ENSGT00950000182843.a.a.a.b.a.b
Pike perch	MODERN SPECIES	19	ENSSLUG00000018373	SLC35F2 (ENSSLUG00000018367)	CUL5 (ENSSLUG00000018340)	ENSSLUG00000018324	dcun1d5 (ENSSLUG00000018317)	ENSSLUG00000018314	ompa (ENSSLUG00000018310)	CAPN5 (ENSSLUG00000017823)	ENSSLUG00000017806	pak1 (ENSSLUG00000017778)	ENSSLUG00000017766	gjc4b (ENSSLUG00000017764)	myo7aa (ENSSLUG00000017628)	ENSSLUG00000017567	ZNF229 (ENSSLUG00000017559)	aqp11 (ENSSLUG00000017552) #22	clns1a (ENSSLUG00000017545) #23	ENSSLUG00000017534 #24	PANX1 (ENSSLUG00000017519)	ENSSLUG00000017451	med17 (ENSSLUG00000017389)	ENSSLUG00000017363	ech1 (ENSSLUG00000016754)	hnrnpl2 (ENSSLUG00000016429)	srsf7a (ENSSLUG00000016399)	ENSSLUG00000016142	ENSSLUG00000016105	ENSSLUG00000016101	ACTN4 (ENSSLUG00000014943)	zgc:85932 (ENSSLUG00000014858)	eif3k (ENSSLUG00000014840)
Channel bull blenny	MODERN SPECIES	4	ENSCGOG00000006041	med17 (ENSCGOG00000006060)	ENSCGOG00000006584	FAM222B (ENSCGOG00000006737)	flot2b (ENSCGOG00000006759)	SLC35F2 (ENSCGOG00000007156)	CUL5 (ENSCGOG00000007165)	dcun1d5 (ENSCGOG00000007492)	CAPN5 (ENSCGOG00000007507)	ompa (ENSCGOG00000008387)	myo7aa (ENSCGOG00000008392)	GDPD4 (ENSCGOG00000008462)	ENSCGOG00000008466	pak1 (ENSCGOG00000008467)	ENSCGOG00000008468	aqp11 (ENSCGOG00000008470) #22	clns1a (ENSCGOG00000008472) #23	RSF1 (ENSCGOG00000008475) #24	panx1a (ENSCGOG00000008497)	aamdc (ENSCGOG00000008509) #25	INTS4 (ENSCGOG00000008524) #28	ENSCGOG00000009075	KCTD14 (ENSCGOG00000009080) #29	rps3 (ENSCGOG00000009090)	ENSCGOG00000009226	ENSCGOG00000009229	zgc:171927 (ENSCGOG00000009232)	si:cabz01090165.1 (ENSCGOG00000009245)	bcas3 (ENSCGOG00000009269)	ENSCGOG00000009693	tbx2b (ENSCGOG00000009709)
Pinecone sodierfish	MODERN SPECIES	4	hif1al (ENSMMDG00005006858)	DMWD (ENSMMDG00005006861)	ENSMMDG00005006862	ENSMMDG00005006866	eif3k (ENSMMDG00005006872)	zgc:85932 (ENSMMDG00005006890)	ACTN4 (ENSMMDG00005006914)	dcun1d5 (ENSMMDG00005007816)	CUL5 (ENSMMDG00005007828)	SLC35F2 (ENSMMDG00005007945)	CAPN5 (ENSMMDG00005007977)	ompa (ENSMMDG00005009663)	myo7aa (ENSMMDG00005009670)	pak1 (ENSMMDG00005009696)	ENSMMDG00005010469	aqp11 (ENSMMDG00005010472) #22	clns1a (ENSMMDG00005001164) #23	ENSMMDG00005001178	ENSMMDG00005001203	SPTBN4 (ENSMMDG00005001948)	blvrb (ENSMMDG00005017067)	ENSMMDG00005017068	kcnk6 (ENSMMDG00005017070)	ENSMMDG00005017074	HIPK4 (ENSMMDG00005017080)	PLD3 (ENSMMDG00005017094)	foxa3 (ENSMMDG00005017101)	irf2bp1 (ENSMMDG00005017105)	polr1g (ENSMMDG00005017108)	ENSMMDG00005017111	ENSMMDG00005017118
Cod	MODERN SPECIES	7	ENSGMOG00000001656	ENSGMOG00000001631	frem2b (ENSGMOG00000001576)	trpc4b (ENSGMOG00000001551)	postnb (ENSGMOG00000001525)	spartb (ENSGMOG00000001489)	dclk1b (ENSGMOG00000001463)	mab21l1 (ENSGMOG00000029011)	NBEA (ENSGMOG00000026728)	ENSGMOG00000014281	ENSGMOG00000004486	trmt9b (ENSGMOG00000024098)	ENSGMOG00000009727	ENSGMOG00000009699	ENSGMOG00000035107	ENSGMOG00000026810 #22	ENSGMOG00000002760 #23	ENSGMOG00000002731	ENSGMOG00000019367	rasgrp4 (ENSGMOG00000019397)	ENSGMOG00000019404	opa3 (ENSGMOG00000019407)	ENSGMOG00000035950	ENSGMOG00000027778	ENSGMOG00000034209	ppp1r13l (ENSGMOG00000024946)	ENSGMOG00000029331	ENSGMOG00000032588	ENSGMOG00000037074	ENSGMOG00000034922	ENSGMOG00000036305
Protacanthopterygii	ANCESTRAL SPECIES	81	ENSGT00940000175843.b	ENSGT00950000183061.a.b.a.a	ENSGT00940000157403	ENSGT00390000004912	ENSGT00940000165563.b	ENSGT00940000171017	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000156648.c.b	ENSGT00940000156155	ENSGT00940000156536.e.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.b #24	ENSGT00390000008610.a.b.b.b	ENSGT00510000046732.A.c	ENSGT01100000263504.a.b.a.b.a.a	ENSGT00940000164977.a	ENSGT00390000002548	ENSGT00940000155573.g.b	ENSGT00510000048626	ENSGT00940000155478.hb.b	ENSGT00450000040324.a.a.a	ENSGT00940000166947	ENSGT00940000164418.a.b	ENSGT00950000182985.a.b.a	ENSGT01030000234613.b.b.h
Salmoninae	ANCESTRAL SPECIES	49			ENSGT00390000004912.b	ENSGT00940000165563.b	ENSGT00940000171017.c	ENSGT00530000063882.b.lb.b	ENSGT00940000158415	ENSGT00390000015655.a.m.a.e	ENSGT00940000156648.c.b.a	ENSGT00940000156155.l	ENSGT00390000009497.b.c	ENSGT00940000155350.g.f	ENSGT00940000156251.a.k.b	ENSGT00940000156536.e.b.a	ENSGT00950000182988.a.b.a.k	ENSGT00530000063816.c.b #22	ENSGT00390000010063.ob.b #23	ENSGT00530000064411.a.d #24	ENSGT00530000063860.b.c.d	ENSGT01060000248594.e.b.a.c	ENSGT00940000155313.g.b.f.b	ENSGT00940000155739.yb.a.b	ENSGT00940000158173.f.m	ENSGT00940000155128.a.a.a.a.c	ENSGT00950000183040.A.a.c.b.f.a	ENSGT00940000163671.a.a.b.d	ENSGT00950000182970.A.a.j	ENSGT00940000158882.c	ENSGT00940000158439.m.f	ENSGT00390000006454.l	ENSGT00390000006454.k.b.a
Huchen	MODERN SPECIES	2616														ENSHHUG00000015051	pak1 (ENSHHUG00000015072)	aqp11 (ENSHHUG00000015158) #22	clns1a (ENSHHUG00000015169) #23	ENSHHUG00000015228	ENSHHUG00000015230	ENSHHUG00000015232 #24	postnb (ENSHHUG00000015281)	ENSHHUG00000015361	frem2b (ENSHHUG00000015561)	ENSHHUG00000015569
Salmoninae_a	ANCESTRAL SPECIES	3	ENSGT00940000160762 #29	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000167717	ENSGT00940000165563.b	ENSGT00940000171017.c	ENSGT00530000063882.b.lb.b	ENSGT00940000158415	ENSGT00390000015655.a.m.a.e	ENSGT00940000156648.c.b.a	ENSGT00940000156155.l	ENSGT00940000156536.e.b.a	ENSGT00390000009497.b.c	ENSGT00940000155350.g.f	ENSGT00940000156251.a.k.b	ENSGT00950000182988.a.b.a.k	ENSGT00530000063816.c.b #22	ENSGT00390000010063.ob.b #23	ENSGT00530000064411.a.d #24	ENSGT00530000063860.b.c.d	ENSGT01060000248594.e.b.a.c	ENSGT00940000155313.g.b.f.b	ENSGT00940000155739.yb.a.b	ENSGT00940000158173.f.m	ENSGT00940000155128.a.a.a.a.c	ENSGT00950000183040.A.a.c.b.f.a	ENSGT00940000163671.a.a.b.d	ENSGT00950000182970.A.a.j	ENSGT00940000158882.c	ENSGT00940000158439.m.f	ENSGT00390000006454.l	ENSGT00390000015210.t
Salmo	ANCESTRAL SPECIES	22	ENSGT01050000244827.C.c.a.b.f	ENSGT00950000183061.a.b.a.a.c	ENSGT00390000004912.b.b	ENSGT00940000165563.b	ENSGT00940000171017.c	ENSGT00530000063882.b.lb.b	ENSGT00940000158415	ENSGT00390000015655.a.m.a.e	ENSGT00940000156648.c.b.a	ENSGT00940000156155.l	ENSGT00940000156536.e.b.a	ENSGT00390000009497.b.c	ENSGT00940000155350.g.f	ENSGT00940000156251.a.k.b	ENSGT00950000182988.a.b.a.k	ENSGT00530000063816.c.b #22	ENSGT00390000010063.ob.b #23	ENSGT00530000064411.a.d #24	ENSGT00530000063860.b.c.d	ENSGT01060000248594.e.b.a.c	ENSGT00940000155313.g.b.f.b	ENSGT00940000155739.yb.a.b	ENSGT00940000158173.f.m	ENSGT00940000155128.a.a.a.a.c	ENSGT00950000183040.A.a.c.b.f.a	ENSGT00940000163671.a.a.b.d	ENSGT00950000182970.A.a.j	ENSGT00940000158882.c	ENSGT00940000158439.m.f	ENSGT00390000006454.l	ENSGT00390000015210.t
Atlantic salmon	MODERN SPECIES	28	NBEA (ENSSSAG00000068625)	mab21l1 (ENSSSAG00000074770)	ENSSSAG00000074842	ENSSSAG00000075709	dus14 (ENSSSAG00000114256)	ENSSSAG00000075712	ENSSSAG00000116236	kbtbd3 (ENSSSAG00000038039)	ENSSSAG00000098691	dcun1d5 (ENSSSAG00000039214)	ENSSSAG00000039372	ompa (ENSSSAG00000092292)	myo7aa (ENSSSAG00000041134)	GDPD4 (ENSSSAG00000043424)	pak1 (ENSSSAG00000043512)	aqp11 (ENSSSAG00000099004) #22	ENSSSAG00000043850	RSF1 (ENSSSAG00000043901) #24	postnb (ENSSSAG00000043962)	trpc4b (ENSSSAG00000044670)	frem2b (ENSSSAG00000046296)	ENSSSAG00000046962	ENSSSAG00000047165	ENSSSAG00000088807	ENSSSAG00000051381	ENSSSAG00000051481	tbx4 (ENSSSAG00000053630)	ENSSSAG00000086327	bcas3 (ENSSSAG00000053793)	prpf8 (ENSSSAG00000063849)	ENSSSAG00000063991
River trout	MODERN SPECIES	4	NBEA (ENSSTUG00000035161)	mab21l1 (ENSSTUG00000039954)	ENSSTUG00000040028	polr2d (ENSSTUG00000041843)	ENSSTUG00000041871	ENSSTUG00000041888	ENSSTUG00000041905	KBTBD3 (ENSSTUG00000041914)	SLC35F2 (ENSSTUG00000041945)	CUL5 (ENSSTUG00000042001)	dcun1d5 (ENSSTUG00000042348)	CAPN5 (ENSSTUG00000042435)	ompa (ENSSTUG00000042678)	myo7aa (ENSSTUG00000042836)	pak1 (ENSSTUG00000044264)	aqp11 (ENSSTUG00000044749) #22	clns1a (ENSSTUG00000044753) #23	ENSSTUG00000044762 #24	ENSSTUG00000044779	postnb (ENSSTUG00000044797)	ENSSTUG00000045098	trpc4b (ENSSTUG00000045130)	frem2b (ENSSTUG00000045470)	ENSSTUG00000045972	TRIM3 (ENSSTUG00000046322)	ENSSTUG00000046406	arfip2b (ENSSTUG00000046421)	ENSSTUG00000046507	brip1 (ENSSTUG00000046703)	tbx4 (ENSSTUG00000046844)	tbx2b (ENSSTUG00000046859)
Oncorhynchus	ANCESTRAL SPECIES	14	ENSGT00950000183023.B.h.b.a	ENSGT00940000160762 #29	ENSGT00390000008610.a.b.b.a.b.a	ENSGT00940000167717	ENSGT00940000165563.b	ENSGT00940000171017.c	ENSGT00530000063882.b.lb.b	ENSGT00940000158415	ENSGT00390000015655.a.m.a.e	ENSGT00940000156648.c.b.a	ENSGT00940000156155.l	ENSGT00940000156536.e.b.a	ENSGT00390000009497.b.c	ENSGT00940000156251.a.k.b	ENSGT00950000182988.a.b.a.k	ENSGT00530000063816.c.b #22	ENSGT00390000010063.ob.b #23	ENSGT00530000064411.a.d #24	ENSGT00530000063860.b.c.d	ENSGT01060000248594.e.b.a.c	ENSGT00940000155313.g.b.f.b	ENSGT00940000155739.yb.a.b	ENSGT00940000158173.f.m	ENSGT00940000155128.a.a.a.a.c	ENSGT00950000183040.A.a.c.b.f.a	ENSGT00940000163671.a.a.b.d	ENSGT00940000158882.c	ENSGT00940000158439.m.f	ENSGT00390000006454.l	ENSGT00390000015210.t	ENSGT00940000161117.e
Oncorhynchus_a	ANCESTRAL SPECIES	32	ENSGT00950000183023.B.h.b.a	ENSGT00940000160762 #29	ENSGT00390000008610.a.b.b.a.b.a	ENSGT00940000167717	ENSGT00940000165563.b	ENSGT00940000171017.c	ENSGT00530000063882.b.lb.b	ENSGT00940000158415	ENSGT00390000015655.a.m.a.e	ENSGT00940000156648.c.b.a	ENSGT00940000156155.l	ENSGT00940000156536.e.b.a	ENSGT00390000009497.b.c	ENSGT00940000156251.a.k.b	ENSGT00950000182988.a.b.a.k	ENSGT00530000063816.c.b #22	ENSGT00390000010063.ob.b #23	ENSGT00530000064411.a.d #24	ENSGT00940000175310	ENSGT00530000063860.b.c.d	ENSGT01060000248594.e.b.a.c	ENSGT00940000155313.g.b.f.b	ENSGT00940000155739.yb.a.b	ENSGT00940000158173.f.m	ENSGT00940000155128.a.a.a.a.c	ENSGT00950000183040.A.a.c.b.f.a	ENSGT00940000163671.a.a.b.d	ENSGT00940000158882.c	ENSGT00940000158439.m.f	ENSGT00390000006454.l	ENSGT00390000015210.t
Chinook salmon	MODERN SPECIES	5	aamdc (ENSOTSG00005035887) #25	panx1a (ENSOTSG00005035890)	spartb (ENSOTSG00005035893)	dclk1b (ENSOTSG00005035911)	NBEA (ENSOTSG00005037362)	mab21l1 (ENSOTSG00005037844)	ENSOTSG00005037847	KBTBD3 (ENSOTSG00005037852)	SLC35F2 (ENSOTSG00005037853)	CUL5 (ENSOTSG00005037860)	dcun1d5 (ENSOTSG00005037874)	CAPN5 (ENSOTSG00005038107)	ompa (ENSOTSG00005038113)	GDPD4 (ENSOTSG00005038115)	pak1 (ENSOTSG00005038117)	aqp11 (ENSOTSG00005001633) #22	clns1a (ENSOTSG00005001690) #23	ENSOTSG00005001691	ENSOTSG00005001694 #24	postnb (ENSOTSG00005001703)	trpc4b (ENSOTSG00005001716)	frem2b (ENSOTSG00005001728)	ENSOTSG00005001732	ENSOTSG00005001735	TRIM3 (ENSOTSG00005001748)	ENSOTSG00005001751	ARFIP2 (ENSOTSG00005001769)	ENSOTSG00005001928	tbx4 (ENSOTSG00005002497)	tbx2b (ENSOTSG00005002498)	bcas3 (ENSOTSG00005002512)
Coho salmon	MODERN SPECIES	9	NBEA (ENSOKIG00005032089)	ENSOKIG00005031617	ENSOKIG00005031158	ENSOKIG00005031048	ENSOKIG00005031028	ENSOKIG00005031013	ENSOKIG00005020127	KBTBD3 (ENSOKIG00005020046)	SLC35F2 (ENSOKIG00005020003)	CUL5 (ENSOKIG00005019842)	dcun1d5 (ENSOKIG00005019767)	ompa (ENSOKIG00005019750)	CAPN5 (ENSOKIG00005019501)	GDPD4 (ENSOKIG00005019461)	pak1 (ENSOKIG00005018630)	aqp11 (ENSOKIG00005018552) #22	clns1a (ENSOKIG00005018540) #23	ENSOKIG00005018526 #24	ENSOKIG00005018515	postnb (ENSOKIG00005015318)	trpc4b (ENSOKIG00005015018)	frem2b (ENSOKIG00005014800)	ENSOKIG00005014710	ENSOKIG00005014676	TRIM3 (ENSOKIG00005013768)	ENSOKIG00005013653	ARFIP2 (ENSOKIG00005013577)	ENSOKIG00005012955	tbx4 (ENSOKIG00005012877)	TBX2 (ENSOKIG00005012824)	bcas3 (ENSOKIG00005012694)
Rainbow trout	MODERN SPECIES	16	ENSOMYG00000075222	ENSOMYG00000019793	ENSOMYG00000060110	ENSOMYG00000019890	ENSOMYG00000019895	ENSOMYG00000019900	ENSOMYG00000019903	ENSOMYG00000019911	ENSOMYG00000019922	ENSOMYG00000019949	dcun1d5 (ENSOMYG00000020008)	ENSOMYG00000020043	ompa (ENSOMYG00000020059)	GDPD4 (ENSOMYG00000048005)	pak1 (ENSOMYG00000020105)	aqp11 (ENSOMYG00000020274) #22	ENSOMYG00000020291 #23	ENSOMYG00000020303 #24	postnb (ENSOMYG00000020373)	trpc4b (ENSOMYG00000020525)	frem2b (ENSOMYG00000020588)	ENSOMYG00000060933	ENSOMYG00000020906	ENSOMYG00000021050	ENSOMYG00000021101	ENSOMYG00000021188	tbx4 (ENSOMYG00000021245)	ENSOMYG00000021258	bcas3 (ENSOMYG00000021401)	ENSOMYG00000048416	ENSOMYG00000021445
Northern pike	MODERN SPECIES		ilkap (ENSELUG00000005893)	polr2d (ENSELUG00000034039)	ENSELUG00000000180	ENSELUG00000001203	ENSELUG00000005955	KBTBD3 (ENSELUG00000005963)	SLC35F2 (ENSELUG00000000190)	CUL5 (ENSELUG00000005991)	dcun1d5 (ENSELUG00000006028)	ompa (ENSELUG00000006051)	CAPN5 (ENSELUG00000006067)	myo7aa (ENSELUG00000006190)	GDPD4 (ENSELUG00000000200)	ENSELUG00000027264	pak1 (ENSELUG00000006340)	aqp11 (ENSELUG00000006371) #22	clns1a (ENSELUG00000006405) #23	ENSELUG00000006420	ENSELUG00000006456 #24	postnb (ENSELUG00000006518)	trpc4b (ENSELUG00000006559)	frem2b (ENSELUG00000006617)	ENSELUG00000006742	TRIM3 (ENSELUG00000001183)	ENSELUG00000006816	arfip2b (ENSELUG00000006852)	ENSELUG00000033648	ENSELUG00000006887	ENSELUG00000006903	ENSELUG00000006918	ENSELUG00000006928
Otomorpha	ANCESTRAL SPECIES	58	ENSGT00390000016972	ENSGT00940000155470.b	ENSGT00940000160400	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a	ENSGT00940000158681.a
Otophysi	ANCESTRAL SPECIES	134	ENSGT00940000155470.b	ENSGT00940000160400	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00940000180202	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a	ENSGT00940000158681.a
Characiphysae	ANCESTRAL SPECIES	66	ENSGT00940000155470.b	ENSGT00940000160400	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00940000180202	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a	ENSGT00940000158681.a
Channel catfish	MODERN SPECIES	23	sema3ab (ENSIPUG00000006565)	sema3d (ENSIPUG00000006546)	grm3 (ENSIPUG00000006501)	elapor2a (ENSIPUG00000006479)	tmem243a (ENSIPUG00000006469)	gan (ENSIPUG00000006434)	cmip (ENSIPUG00000006302)	PLCG2 (ENSIPUG00000006196)	tldc1 (ENSIPUG00000006165)	COTL1 (ENSIPUG00000006136)	klhl36 (ENSIPUG00000006104)	zgc:56622 (ENSIPUG00000006082)	tat (ENSIPUG00000006050)	ENSIPUG00000006039	pak1 (ENSIPUG00000006002)	aqp11 (ENSIPUG00000005985) #22	clns1a (ENSIPUG00000005935) #23	RSF1 (ENSIPUG00000005914) #24	aamdc (ENSIPUG00000005882) #25	ints4 (ENSIPUG00000005782) #28	KCTD14 (ENSIPUG00000005769) #29	rps3 (ENSIPUG00000005685)	ENSIPUG00000005660	fchsd2 (ENSIPUG00000005570)	P2RY2 (ENSIPUG00000005544)	P2RY2 (ENSIPUG00000005517)	relt (ENSIPUG00000005497)	arhgef17 (ENSIPUG00000005456)	P2RY3 (ENSIPUG00000005431)	ENSIPUG00000005416	ENSIPUG00000005392
Characiphysae_b	ANCESTRAL SPECIES	72	ENSGT00940000155470.b	ENSGT00940000160400	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00940000180202	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a	ENSGT00940000158681.a
Characoidei	ANCESTRAL SPECIES	76	ENSGT00940000155470.b	ENSGT00940000160400	ENSGT00950000182903.a.a.c	ENSGT00940000159223.c	ENSGT00940000165683	ENSGT00940000157384.b	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00940000180202	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00940000157637.a
Red-bellied piranha	MODERN SPECIES	98												myo7aa (ENSPNAG00000018151)	ENSPNAG00000018200	GDPD4 (ENSPNAG00000018223)	pak1 (ENSPNAG00000018299)	aqp11 (ENSPNAG00000018325) #22	clns1a (ENSPNAG00000018394) #23	RSF1 (ENSPNAG00000018419) #24	aamdc (ENSPNAG00000018443) #25	INTS4 (ENSPNAG00000018579) #28	KCTD14 (ENSPNAG00000018601) #29	rps3 (ENSPNAG00000018641)	ENSPNAG00000018673	FCHSD2 (ENSPNAG00000018820)	P2RY2 (ENSPNAG00000018838)	relt (ENSPNAG00000018870)	ARHGEF17 (ENSPNAG00000018902)	P2RY6 (ENSPNAG00000018920)	ENSPNAG00000018929	ENSPNAG00000018960	ENSPNAG00000018977
Mexicana tetra	MODERN SPECIES	115	abcc5 (ENSAMXG00000014147)	rnpepl1 (ENSAMXG00000029654)	ENSAMXG00000031190	DVL3 (ENSAMXG00000014040)	ap2m1b (ENSAMXG00000014011)	mmp23bb (ENSAMXG00000032267)	pcyt1ab (ENSAMXG00000013963)	serp1 (ENSAMXG00000042435)	eif2a (ENSAMXG00000013924)	dcun1d5 (ENSAMXG00000013901)	ompa (ENSAMXG00000026326)	capn5a (ENSAMXG00000013893)	ENSAMXG00000030631	GDPD4 (ENSAMXG00000013818)	pak1 (ENSAMXG00000013796)	aqp11 (ENSAMXG00000031970) #22	clns1a (ENSAMXG00000013761) #23	RSF1 (ENSAMXG00000013740) #24	aamdc (ENSAMXG00000013718) #25	INTS4 (ENSAMXG00000013679) #28	ENSAMXG00000043500	KCTD14 (ENSAMXG00000030590) #29	rps3 (ENSAMXG00000013642)	ENSAMXG00000043130	ENSAMXG00000036448	FCHSD2 (ENSAMXG00000013591)	P2RY2 (ENSAMXG00000040207)	relt (ENSAMXG00000033275)	ARHGEF17 (ENSAMXG00000013562)	P2RY6 (ENSAMXG00000026325)	ENSAMXG00000013543
Electric eel	MODERN SPECIES	134				ENSEEEG00000023646	DVL3 (ENSEEEG00000023644)	ap2m1b (ENSEEEG00000023634)	mmp23bb (ENSEEEG00000023630)	pcyt1ab (ENSEEEG00000023605)	serp1 (ENSEEEG00000023601)	eif2a (ENSEEEG00000023596)	dcun1d5 (ENSEEEG00000023587)	capn5a (ENSEEEG00000023586)	myo7aa (ENSEEEG00000023580)	GDPD4 (ENSEEEG00000023572)	pak1 (ENSEEEG00000023532)	aqp11 (ENSEEEG00000023526) #22	clns1a (ENSEEEG00000023523) #23	ENSEEEG00000023518	aamdc (ENSEEEG00000023516) #25	INTS4 (ENSEEEG00000023515) #28	KCTD14 (ENSEEEG00000023513) #29	ENSEEEG00000023509	ENSEEEG00000023507	FCHSD2 (ENSEEEG00000023467)	P2RY2 (ENSEEEG00000023463)	relt (ENSEEEG00000023462)	ARHGEF17 (ENSEEEG00000023460)	P2RY6 (ENSEEEG00000023459)	ENSEEEG00000023458	ENSEEEG00000023456	SLITRK3 (ENSEEEG00000023455)
Cyprinoidei	ANCESTRAL SPECIES	138						ENSGT00940000158330	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155	ENSGT00940000180202	ENSGT00390000009497.b	ENSGT00940000156536.e.a.i	ENSGT00940000155350.g	ENSGT00940000156251.a.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b.g	ENSGT01030000234621.C.a.a.b.h	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	243	ENSGT00940000166643.d	ENSGT00940000156218.k.a	ENSGT00940000155174.f.`b.b	ENSGT00390000010760.e.b.c.a	ENSGT00390000010760.e.b.d.b.a	ENSGT00940000158330.w	ENSGT00940000161729.m.b.e.b	ENSGT00730000111053	ENSGT00940000156155.j	ENSGT00940000156536.e.a.i.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000166878	ENSGT00940000156251.a.a.a	ENSGT00950000182988.a.b.a.d	ENSGT00530000063816.c.b.a #22	ENSGT00390000010063.qb.a #23	ENSGT00530000064411.a.b #24	ENSGT00390000011958.u #25	ENSGT00390000010128.y #28	ENSGT00390000008610.a.a.c.a	ENSGT00510000046732.A.d.a	ENSGT01030000234621.C.a.a.b.h.b	ENSGT00940000160350.h
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	37	rab27a (ENSCARG00000038350)	ENSCARG00000038371	UNC13C (ENSCARG00000038514)	cdh7a (ENSCARG00000039408)	si:dkey-14d8.7 (ENSCARG00000039452)	ENSCARG00000053433	ENSCARG00000053519	serp1 (ENSCARG00000055217)	eif2a (ENSCARG00000055288)	dcun1d5 (ENSCARG00000055779)	capn5a (ENSCARG00000055845)	ompa (ENSCARG00000056164)	ENSCARG00000056175	GDPD4 (ENSCARG00000056300)	pak1 (ENSCARG00000056359)	aqp11 (ENSCARG00000056843) #22	clns1a (ENSCARG00000056853) #23	mlycd (ENSCARG00000056868)	rfx4 (ENSCARG00000056887)	ric8b (ENSCARG00000057023)	ENSCARG00000057062	ENSCARG00000057077	skor1b (ENSCARG00000057106)	ENSCARG00000057132	aagab (ENSCARG00000057137)	smad3b (ENSCARG00000057166)	smad6b (ENSCARG00000057432)	snapc5 (ENSCARG00000057463)	LCTL (ENSCARG00000057492)	rpl4 (ENSCARG00000057625)	map2k1 (ENSCARG00000057706)
Goldfish	MODERN SPECIES	336																aqp11 (ENSCARG00000039927) #22	clns1a (ENSCARG00000039937) #23	RSF1 (ENSCARG00000040091) #24	aamdc (ENSCARG00000040107) #25	rps3 (ENSCARG00000040121)	FCHSD2 (ENSCARG00000040241)	P2RY2 (ENSCARG00000040746)	P2RY2 (ENSCARG00000039671)	relt (ENSCARG00000039682)	ARHGEF17 (ENSCARG00000039710)	P2RY6 (ENSCARG00000040055)	fam168a (ENSCARG00000040062)
Cyprininae_a	ANCESTRAL SPECIES	70	ENSGT00940000155943.a.d	ENSGT00530000063948.b	ENSGT00940000156218.k.a	ENSGT00940000155174.f.`b.b	ENSGT00390000010760.e.b.c.a	ENSGT00390000010760.e.b.d.b.a	ENSGT00940000158330.w	ENSGT00940000162467.a.a	ENSGT00730000111053	ENSGT00940000156155.j	ENSGT00940000156536.e.a.i.b	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a.a.a	ENSGT00950000182988.a.b.a.d	ENSGT00530000063816.c.b.a #22	ENSGT00390000010063.qb.a #23	ENSGT00530000064411.a.b #24	ENSGT00390000011958.u #25	ENSGT00390000010128.y #28	ENSGT00390000008610.a.a.c.a	ENSGT00510000046732.A.d.a	ENSGT01030000234621.C.a.a.b.h.b	ENSGT00940000160350.h	ENSGT00940000153798.B.j	ENSGT01030000234621.C.a.b.b	ENSGT00390000005140.a.b	ENSGT00940000157637.a.b	ENSGT00940000178700	ENSGT00940000158681.a.f	ENSGT00940000164162.i.a
Common carp reference	MODERN SPECIES	9	ENSCCRG00000058915	pigb (ENSCCRG00000021788)	ENSCCRG00000021785	ENSCCRG00000056199	ENSCCRG00000074708	ENSCCRG00000039023	ENSCCRG00000038888	ENSCCRG00000038868	eif2a (ENSCCRG00000038858)	dcun1d5 (ENSCCRG00000038840)	capn5a (ENSCCRG00000045407)	ompa (ENSCCRG00000063471)	myo7aa (ENSCCRG00000067841)	GDPD4 (ENSCCRG00000037451)	pak1 (ENSCCRG00000053253)	aqp11 (ENSCCRG00000021499) #22	clns1a (ENSCCRG00000018899) #23	RSF1 (ENSCCRG00000063602) #24	aamdc (ENSCCRG00000058236) #25	INTS4 (ENSCCRG00000016334) #28	rps3 (ENSCCRG00000018292)	ENSCCRG00000018454	ENSCCRG00000076272	ENSCCRG00000079795	relt (ENSCCRG00000067376)	ENSCCRG00000051351	ARHGEF17 (ENSCCRG00000082091)	P2RY6 (ENSCCRG00000063902)	ENSCCRG00000069648	ENSCCRG00000058092	ENSCCRG00000064077
Golden-line barbel	MODERN SPECIES	3851																aqp11 (ENSSGRG00000007557) #22
Cyprininae	ANCESTRAL SPECIES	337	ENSGT00940000156218.k.b	ENSGT00950000183090.A	ENSGT00940000166643.c	ENSGT00940000168208	ENSGT00390000004930	ENSGT00940000155943.a.c	ENSGT00940000160924.d	ENSGT00390000000707.y.b.a	ENSGT00390000003210.d	ENSGT00940000154415.lb.a.a.a	ENSGT00940000159496.k.d.b	ENSGT00940000159100.g.e.a	ENSGT00940000156195.q.b.h	ENSGT00940000154743.B.o.a.h	ENSGT00950000182988.a.b.a.c	ENSGT00530000063816.c.b.b #22	ENSGT00390000010063.rb #23	ENSGT00530000064411.a.a #24	ENSGT00390000011958.v #25	ENSGT00390000010128.z #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a.d	ENSGT00940000165320	ENSGT00510000046732.A.d.b	ENSGT01030000234621.C.a.a.b.g	ENSGT01030000234621.C.a.a.b.h.a	ENSGT00940000160350.g	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b.a	ENSGT00390000005140.a.a
Cyprininae_a	ANCESTRAL SPECIES	25	ENSGT00940000156218.k.b	ENSGT00950000183090.A	ENSGT00940000166643.c	ENSGT00940000168208	ENSGT00390000004930	ENSGT00940000155943.a.c	ENSGT00940000160924.d	ENSGT00390000000707.y.b.a	ENSGT00390000003210.d	ENSGT00940000154415.lb.a.a.a	ENSGT00940000159496.k.d.b	ENSGT00940000159100.g.e.a	ENSGT00940000156195.q.b.h	ENSGT00940000154743.B.o.a.h	ENSGT00950000182988.a.b.a.c	ENSGT00530000063816.c.b.b #22	ENSGT00390000010063.rb #23	ENSGT00530000064411.a.a #24	ENSGT00390000011958.v #25	ENSGT00390000010128.z #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a.d	ENSGT00940000165320	ENSGT00510000046732.A.d.b	ENSGT01030000234621.C.a.a.b.g	ENSGT01030000234621.C.a.a.b.h.a	ENSGT00940000160350.g	ENSGT00940000153798.B.i	ENSGT01030000234621.C.a.b.a	ENSGT00390000005140.a.a	ENSGT00940000157637.a.a
Golden-line barbel	MODERN SPECIES	181	nedd4a (ENSSGRG00000048326)	wtip (ENSSGRG00000048318)	gpib (ENSSGRG00000048206)	GARRE1 (ENSSGRG00000047958)	ss18l2 (ENSSGRG00000047956)	ENSSGRG00000047955	lsm14ab (ENSSGRG00000047947)	ENSSGRG00000047943	KCTD15 (ENSSGRG00000047940)	CHST8 (ENSSGRG00000047938)	pepd (ENSSGRG00000047937)	ugt5f1 (ENSSGRG00000047935)	nptnb (ENSSGRG00000047934)	ENSSGRG00000047932	pak1 (ENSSGRG00000046226)	aqp11 (ENSSGRG00000046199) #22	clns1a (ENSSGRG00000046196) #23	RSF1 (ENSSGRG00000046193) #24	aamdc (ENSSGRG00000046192) #25	INTS4 (ENSSGRG00000046050) #28	KCTD14 (ENSSGRG00000046043) #29	rps3 (ENSSGRG00000045989)	ENSSGRG00000045979	FCHSD2 (ENSSGRG00000045924)	P2RY2 (ENSSGRG00000045921)	P2RY2 (ENSSGRG00000045920)	relt (ENSSGRG00000045919)	ARHGEF17 (ENSSGRG00000045918)	ENSSGRG00000045917	P2RY6 (ENSSGRG00000045916)	fam168a (ENSSGRG00000045914)
Common carp reference	MODERN SPECIES	19	dnaaf4 (ENSCCRG00000049321)	ENSCCRG00000049324	PRTG (ENSCCRG00000007016)	nedd4a (ENSCCRG00000002006)	wtip (ENSCCRG00000082254)	gpib (ENSCCRG00000049335)	ENSCCRG00000049696	lsm14ab (ENSCCRG00000049558)	ENSCCRG00000049526	KCTD15 (ENSCCRG00000082235)	CHST8 (ENSCCRG00000074768)	PEPD (ENSCCRG00000079116)	nptnb (ENSCCRG00000002739)	ENSCCRG00000073550	pak1 (ENSCCRG00000025855)	aqp11 (ENSCCRG00000076976) #22	clns1a (ENSCCRG00000067103) #23	RSF1 (ENSCCRG00000054713) #24	aamdc (ENSCCRG00000018471) #25	INTS4 (ENSCCRG00000018932) #28	rps3 (ENSCCRG00000018907)	ENSCCRG00000018459	ENSCCRG00000077876	ENSCCRG00000074022	ENSCCRG00000048135	relt (ENSCCRG00000021521)	ENSCCRG00000021502	P2RY6 (ENSCCRG00000072292)	ENSCCRG00000082068	ENSCCRG00000058914	ENSCCRG00000058594
Goldfish	MODERN SPECIES	9	ENSCARG00000005683	dnaaf4 (ENSCARG00000005696)	PRTG (ENSCARG00000005754)	nedd4a (ENSCARG00000006092)	wtip (ENSCARG00000009919)	gpib (ENSCARG00000009953)	GARRE1 (ENSCARG00000010023)	lsm14ab (ENSCARG00000010099)	ENSCARG00000010168	KCTD15 (ENSCARG00000010178)	CHST8 (ENSCARG00000010190)	ENSCARG00000010229	nptnb (ENSCARG00000010456)	pak1 (ENSCARG00000010506)	ENSCARG00000010691	aqp11 (ENSCARG00000010698) #22	clns1a (ENSCARG00000010708) #23	RSF1 (ENSCARG00000010736) #24	aamdc (ENSCARG00000010749) #25	INTS4 (ENSCARG00000010795) #28	KCTD14 (ENSCARG00000011600) #29	ENSCARG00000011615	ENSCARG00000011707	FCHSD2 (ENSCARG00000011798)	P2RY2 (ENSCARG00000012926)	P2RY2 (ENSCARG00000012931)	relt (ENSCARG00000012935)	ARHGEF17 (ENSCARG00000012944)	P2RY6 (ENSCARG00000012976)	fam168a (ENSCARG00000012987)	glg1b (ENSCARG00000013064)
Zebrafish	MODERN SPECIES	9	ENSDARG00000111801	serpini1 (ENSDARG00000034168)	pdcd10a (ENSDARG00000035054)	ENSDARG00000069723	LRCH3 (ENSDARG00000100679)	serp1 (ENSDARG00000099439)	ENSDARG00000111944	eif2a (ENSDARG00000101061)	dcun1d5 (ENSDARG00000100363)	ENSDARG00000101159	ompa (ENSDARG00000105218)	capn5a (ENSDARG00000103317)	myo7aa (ENSDARG00000099871)	GDPD4 (ENSDARG00000102447)	pak1 (ENSDARG00000103959)	aqp11 (ENSDARG00000100555) #22	clns1a (ENSDARG00000103027) #23	aamdc (ENSDARG00000103957) #25	INTS4 (ENSDARG00000102953) #28	KCTD14 (ENSDARG00000110240) #29	rps3 (ENSDARG00000103007)	ENSDARG00000098597	ENSDARG00000111693	fam168a (ENSDARG00000098832)	ARHGEF17 (ENSDARG00000101644)	relt (ENSDARG00000099724)	P2RY2 (ENSDARG00000104425)	P2RY2 (ENSDARG00000104927)	P2RY2 (ENSDARG00000099915)	ENSDARG00000110183	ENSDARG00000112435
Clupeiformes	ANCESTRAL SPECIES	59	ENSGT00920000149180.b.g	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT00940000162662	ENSGT00940000160033.c	ENSGT00390000012368	ENSGT00390000007046.b.a.b	ENSGT00940000166445	ENSGT00940000156536.e.a.i	ENSGT00390000009497.b	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.d	ENSGT01030000234621.C.a.a.b	ENSGT00940000160350	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a	ENSGT00940000157637.a	ENSGT00940000158681.a
Atlantic herring	MODERN SPECIES	25	LRRC75A (ENSCHAG00000008495)	crk (ENSCHAG00000008508)	ENSCHAG00000008527	ENSCHAG00000008594	ENSCHAG00000008616	itpkcb (ENSCHAG00000008682)	zgc:153119 (ENSCHAG00000008699)	snrpa (ENSCHAG00000008709)	ENSCHAG00000008734	capn5a (ENSCHAG00000008755)	ompa (ENSCHAG00000008985)	myo7aa (ENSCHAG00000009132)	GDPD4 (ENSCHAG00000013956)	ENSCHAG00000013967	pak1 (ENSCHAG00000014021)	aqp11 (ENSCHAG00000014540) #22	clns1a (ENSCHAG00000014547) #23	RSF1 (ENSCHAG00000014555) #24	aamdc (ENSCHAG00000014623) #25	INTS4 (ENSCHAG00000014647) #28	KCTD14 (ENSCHAG00000015537) #29	rps3 (ENSCHAG00000015551)	paf1 (ENSCHAG00000015847)	GMFG (ENSCHAG00000016414)	zgc:172323 (ENSCHAG00000016429)	zgc:172323 (ENSCHAG00000016487)	zgc:172323 (ENSCHAG00000016570)	ENSCHAG00000016638	zgc:172323 (ENSCHAG00000016645)	SAMD4B (ENSCHAG00000016717)	ENSCHAG00000017054
Denticle herring	MODERN SPECIES	10	dhrs13b.2 (ENSDCDG00000027527)	smtnl (ENSDCDG00000027528)	tmem199 (ENSDCDG00000027530)	poldip2 (ENSDCDG00000027539)	LRRC75A (ENSDCDG00000027781)	crk (ENSDCDG00000027784)	itpkcb (ENSDCDG00000027789)	zgc:153119 (ENSDCDG00000027799)	snrpa (ENSDCDG00000027805)	ENSDCDG00000027809	capn5a (ENSDCDG00000027848)	ompa (ENSDCDG00000028404)	myo7aa (ENSDCDG00000028451)	GDPD4 (ENSDCDG00000029741)	pak1 (ENSDCDG00000029768)	aqp11 (ENSDCDG00000030631) #22	clns1a (ENSDCDG00000030632) #23	ENSDCDG00000030635	INTS4 (ENSDCDG00000030636) #28	aamdc (ENSDCDG00000030638) #25	KCTD14 (ENSDCDG00000030639) #29	rps3 (ENSDCDG00000030642)	ENSDCDG00000030648	FCHSD2 (ENSDCDG00000030668)	P2RY2 (ENSDCDG00000031234)	relt (ENSDCDG00000031237)	ARHGEF17 (ENSDCDG00000031247)	P2RY6 (ENSDCDG00000031254)	fam168a (ENSDCDG00000031256)	ENSDCDG00000031259	ENSDCDG00000031261
Osteoglossiformes	ANCESTRAL SPECIES	14	ENSGT00940000159575	ENSGT00940000155677.b.d	ENSGT00440000039469	ENSGT00940000157765	ENSGT00940000155627	ENSGT00940000158563	ENSGT00940000158415	ENSGT00390000015655.a.m.a	ENSGT00940000159782.b	ENSGT00940000156648.a.b	ENSGT00940000156155.m	ENSGT00390000009497	ENSGT00940000155350.g	ENSGT00940000156251.a	ENSGT00950000182988.a.b.a.a	ENSGT00530000063816.c.b #22	ENSGT00390000010063 #23	ENSGT00530000064411.a #24	ENSGT00390000011958 #25	ENSGT00390000010128 #28	ENSGT00940000160762 #29	ENSGT00390000008610.a.a	ENSGT00940000165320	ENSGT00510000046732.A.c	ENSGT00940000160350	ENSGT01030000234621.C.a.a.b	ENSGT00940000153798.B	ENSGT01030000234621.C.a.b	ENSGT00390000005140.a.s	ENSGT00940000157637.a	ENSGT00940000158681
Asian bonytongue	MODERN SPECIES	1		MSANTD4 (ENSSFOG00015003258)	GUCY1A2 (ENSSFOG00015030640)	cwf19l2 (ENSSFOG00015003191)	ALKBH8 (ENSSFOG00015003173)	KBTBD3 (ENSSFOG00015003156)	elmod1 (ENSSFOG00015003065)	ENSSFOG00015003009	dcun1d5 (ENSSFOG00015002982)	ENSSFOG00015002972	ompa (ENSSFOG00015024542)	CAPN5 (ENSSFOG00015002892)	myo7aa (ENSSFOG00015002698)	GDPD4 (ENSSFOG00015002682)	pak1 (ENSSFOG00015002635)	aqp11 (ENSSFOG00015032092) #22	clns1a (ENSSFOG00015002589) #23	RSF1 (ENSSFOG00015002501) #24	aamdc (ENSSFOG00015029619) #25	INTS4 (ENSSFOG00015002354) #28	KCTD14 (ENSSFOG00015002323) #29	rps3 (ENSSFOG00015002290)	ENSSFOG00015002286	FCHSD2 (ENSSFOG00015002267)	relt (ENSSFOG00015031194)	ARHGEF17 (ENSSFOG00015027586)	P2RY6 (ENSSFOG00015033260)	fam168a (ENSSFOG00015031466)	ENSSFOG00015002162	ENSSFOG00015002120	ENSSFOG00015002099
P. kingsleyae	MODERN SPECIES	46	ENSPKIG00000023564	ENSPKIG00000023582	GUCY1A2 (ENSPKIG00000023593)	cwf19l2 (ENSPKIG00000023622)	ALKBH8 (ENSPKIG00000023662)	KBTBD3 (ENSPKIG00000023695)	SLC35F2 (ENSPKIG00000023710)	CUL5 (ENSPKIG00000023730)	dcun1d5 (ENSPKIG00000023773)	ENSPKIG00000023806	CAPN5 (ENSPKIG00000023819)	ompa (ENSPKIG00000023839)	myo7aa (ENSPKIG00000023866)	GDPD4 (ENSPKIG00000023910)	pak1 (ENSPKIG00000023941)	aqp11 (ENSPKIG00000023955) #22	clns1a (ENSPKIG00000023965) #23	RSF1 (ENSPKIG00000023983) #24	aamdc (ENSPKIG00000024002) #25	INTS4 (ENSPKIG00000024017) #28	rps3 (ENSPKIG00000024046)	KCTD14 (ENSPKIG00000024063) #29	ENSPKIG00000024081	FCHSD2 (ENSPKIG00000024091)	relt (ENSPKIG00000024107)	P2RY2 (ENSPKIG00000024120)	ARHGEF17 (ENSPKIG00000024134)	P2RY6 (ENSPKIG00000024152)	fam168a (ENSPKIG00000024158)	ENSPKIG00000024183	SLITRK3 (ENSPKIG00000024192)
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	12	ENSECRG00000002636	ALKBH8 (ENSECRG00000002603)	KBTBD3 (ENSECRG00000002576)	elmod1 (ENSECRG00000002565)	slc35f2 (ENSECRG00000002549)	ENSECRG00000002534	cul5a (ENSECRG00000002478)	dcun1d5 (ENSECRG00000002439)	ompa (ENSECRG00000002422)	ENSECRG00000002416	capn5a (ENSECRG00000002390)	myo7aa (ENSECRG00000002333)	GDPD4 (ENSECRG00000002290)	pak1 (ENSECRG00000002211)	aqp11 (ENSECRG00000002139) #22	aqp11 (ENSECRG00000002116) #22	clns1a (ENSECRG00000002093) #23	RSF1 (ENSECRG00000002059) #24	aamdc (ENSECRG00000002029) #25	INTS4 (ENSECRG00000001992) #28	KCTD14 (ENSECRG00000001975) #29	rps3 (ENSECRG00000001888)	ENSECRG00000001810	FCHSD2 (ENSECRG00000001743)	P2RY2 (ENSECRG00000001687)	ENSECRG00000001651	P2RY2 (ENSECRG00000001644)	P2RY2 (ENSECRG00000001636)	P2RY6 (ENSECRG00000001625)	dnajb13 (ENSECRG00000001431)	ARHGEF17 (ENSECRG00000001332)
Reedfish	MODERN SPECIES	12	GUCY1A2 (ENSECRG00000002651)	ENSECRG00000002636	ALKBH8 (ENSECRG00000002603)	KBTBD3 (ENSECRG00000002576)	elmod1 (ENSECRG00000002565)	slc35f2 (ENSECRG00000002549)	ENSECRG00000002534	cul5a (ENSECRG00000002478)	dcun1d5 (ENSECRG00000002439)	ompa (ENSECRG00000002422)	ENSECRG00000002416	capn5a (ENSECRG00000002390)	myo7aa (ENSECRG00000002333)	GDPD4 (ENSECRG00000002290)	pak1 (ENSECRG00000002211)	aqp11 (ENSECRG00000002139) #22	aqp11 (ENSECRG00000002116) #22	clns1a (ENSECRG00000002093) #23	RSF1 (ENSECRG00000002059) #24	aamdc (ENSECRG00000002029) #25	INTS4 (ENSECRG00000001992) #28	KCTD14 (ENSECRG00000001975) #29	rps3 (ENSECRG00000001888)	ENSECRG00000001810	FCHSD2 (ENSECRG00000001743)	P2RY2 (ENSECRG00000001687)	ENSECRG00000001651	P2RY2 (ENSECRG00000001644)	P2RY2 (ENSECRG00000001636)	P2RY6 (ENSECRG00000001625)	dnajb13 (ENSECRG00000001431)
Cyclostomata	ANCESTRAL SPECIES	717																ENSGT00530000063816.c #22	ENSGT00390000010063 #23
Hagfish	MODERN SPECIES	636	ENSEBUG00000007148	ENSEBUG00000009384	ENSEBUG00000004450	ENSEBUG00000013146	ENSEBUG00000005041	ENSEBUG00000011244	ENSEBUG00000015935	ENSEBUG00000016596	ENSEBUG00000010911	ENSEBUG00000016556	RAPGEF2 (ENSEBUG00000010166)	ENSEBUG00000005344	ENSEBUG00000010295	itm2ba (ENSEBUG00000012080)	ENSEBUG00000006266	aqp11 (ENSEBUG00000013906) #22	ENSEBUG00000002566 #23	ENSEBUG00000002371