Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00390000007219	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT00910000147012	ENSGT00390000001542 #30	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT00910000147012	ENSGT00390000001542 #30	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT00390000001542 #30	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36
Equus	ANCESTRAL SPECIES	5	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT01090000263326 #13	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT00390000001542 #30	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00940000153110.A #37
Horse	MODERN SPECIES	7	GP9 (ENSECAG00000018985) #8	ENSECAG00000029531 #9	ENSECAG00000054714	ISY1 (ENSECAG00000013768) #10	CNBP (ENSECAG00000009512) #11	COPG1 (ENSECAG00000000124) #12	ENSECAG00000044538 #13	ENSECAG00000028617	H1-10 (ENSECAG00000003332) #14	ENSECAG00000048657 #15	RAB7A (ENSECAG00000012559) #16	RPN1 (ENSECAG00000003030) #17	GATA2 (ENSECAG00000016768) #18	DNAJB8 (ENSECAG00000032630) #19	EEFSEC (ENSECAG00000016565) #21	RUVBL1 (ENSECAG00000000545) #22	SEC61A1 (ENSECAG00000013475) #23	KBTBD12 (ENSECAG00000011193) #24	ENSECAG00000059312	MGLL (ENSECAG00000007658) #25	ABTB1 (ENSECAG00000012607) #26	PODXL2 (ENSECAG00000008843) #27	MCM2 (ENSECAG00000019631) #28	TPRA1 (ENSECAG00000016300) #29	ENSECAG00000034966	ENSECAG00000037753 #30	ENSECAG00000043184	PLXNA1 (ENSECAG00000000022) #31	CHCHD6 (ENSECAG00000000017) #32	TXNRD3 (ENSECAG00000022090) #33	ENSECAG00000056170
Donkey	MODERN SPECIES	13	RAB43 (ENSEASG00005015808) #9	GP9 (ENSEASG00005015807) #8	ENSEASG00005035595	ISY1 (ENSEASG00005015810) #10	CNBP (ENSEASG00005036497) #11	COPG1 (ENSEASG00005015813) #12	ENSEASG00005015815 #13	ENSEASG00005034619 #14	ENSEASG00005006800 #16	ENSEASG00005037828 #15	RPN1 (ENSEASG00005006797) #17	GATA2 (ENSEASG00005006794) #18	ENSEASG00005006791 #19	ENSEASG00005006788 #20	EEFSEC (ENSEASG00005006786) #21	RUVBL1 (ENSEASG00005006781) #22	SEC61A1 (ENSEASG00005006778) #23	KBTBD12 (ENSEASG00005006776) #24	MGLL (ENSEASG00005024928) #25	ABTB1 (ENSEASG00005006769) #26	PODXL2 (ENSEASG00005006765) #27	MCM2 (ENSEASG00005006759) #28	ENSEASG00005006757 #29	ENSEASG00005034594 #30	PLXNA1 (ENSEASG00005006242) #31	CHCHD6 (ENSEASG00005006190) #32	TXNRD3 (ENSEASG00005006188) #33	CHST13 (ENSEASG00005006186) #34	UROC1 (ENSEASG00005006181) #35	ZXDC (ENSEASG00005006173) #36	CFAP100 (ENSEASG00005006165) #37
Chiroptera	ANCESTRAL SPECIES	76		ENSGT00390000007551	ENSGT00390000007701	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00940000153110.A #37
Microchiroptera	ANCESTRAL SPECIES	56	ENSGT00940000157865	ENSGT00390000007551	ENSGT00390000007701	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00940000153110.A #37	ENSGT00940000156977
Greater horseshoe bat	MODERN SPECIES	10			ENSRFEG00010005832	GP9 (ENSRFEG00010005877) #8	RAB43 (ENSRFEG00010005893) #9	ISY1 (ENSRFEG00010005913) #10	CNBP (ENSRFEG00010005953) #11	COPG1 (ENSRFEG00010006037) #12	HMCES (ENSRFEG00010006155)	H1-10 (ENSRFEG00010006197) #14	RAB7A (ENSRFEG00010006246) #16	RPN1 (ENSRFEG00010006310) #17	GATA2 (ENSRFEG00010006359) #18	DNAJB8 (ENSRFEG00010006393) #19	EEFSEC (ENSRFEG00010006458) #21	RUVBL1 (ENSRFEG00010006540) #22	SEC61A1 (ENSRFEG00010006596) #23	KBTBD12 (ENSRFEG00010006684) #24	ENSRFEG00010006714	MGLL (ENSRFEG00010006765) #25	ENSRFEG00010006843	PODXL2 (ENSRFEG00010006876) #27	MCM2 (ENSRFEG00010006924) #28	TPRA1 (ENSRFEG00010006977) #29	ENSRFEG00010007030	PLXNA1 (ENSRFEG00010007057) #31	CHCHD6 (ENSRFEG00010007121) #32	TXNRD3 (ENSRFEG00010007252) #33	ENSRFEG00010008188	CHST13 (ENSRFEG00010008204) #34	UROC1 (ENSRFEG00010008245) #35
Microbat	MODERN SPECIES	1027	SULF2 (ENSMLUG00000000429)	PREX1 (ENSMLUG00000016835)	ARFGEF2 (ENSMLUG00000006936)	ENSMLUG00000028217	RAB43 (ENSMLUG00000025153) #9	ISY1 (ENSMLUG00000011804) #10	ENSMLUG00000025147	CNBP (ENSMLUG00000012554) #11	COPG1 (ENSMLUG00000012542) #12	HMCES (ENSMLUG00000010630)	RAB7A (ENSMLUG00000008454) #16	RPN1 (ENSMLUG00000017213) #17	GATA2 (ENSMLUG00000005506) #18	DNAJB8 (ENSMLUG00000001820) #19	EEFSEC (ENSMLUG00000004261) #21	RUVBL1 (ENSMLUG00000004254) #22	SEC61A1 (ENSMLUG00000004248) #23	KBTBD12 (ENSMLUG00000001141) #24	MGLL (ENSMLUG00000017152) #25	ABTB1 (ENSMLUG00000017150) #26	PODXL2 (ENSMLUG00000017144) #27	MCM2 (ENSMLUG00000017140) #28	TPRA1 (ENSMLUG00000007464) #29
Megabat	MODERN SPECIES	1368															EEFSEC (ENSPVAG00000007070) #21	RUVBL1 (ENSPVAG00000007066) #22	SEC61A1 (ENSPVAG00000007062) #23
Carnivora	ANCESTRAL SPECIES	6	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT00910000147012	ENSGT00390000001542 #30	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35
Caniformia	ANCESTRAL SPECIES	4	ENSGT00940000163561	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT00910000147012	ENSGT00390000001542 #30	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00940000163561	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00940000153110.A #37
Ursidae	ANCESTRAL SPECIES	11	ENSGT00940000163561	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323.b #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00940000153110.A #37
Ursus	ANCESTRAL SPECIES	43	ENSGT00390000008330	ENSGT00940000163561	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323.b #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT01010000223084	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36
Polar bear	MODERN SPECIES	210	HDAC11 (ENSUMAG00000015867)	NUP210 (ENSUMAG00000015439)	IQSEC1 (ENSUMAG00000015296)	ACAD9 (ENSUMAG00000015181)	CFAP92 (ENSUMAG00000015150)	ENSUMAG00000015128 #9	ENSUMAG00000015120 #11	COPG1 (ENSUMAG00000015102) #12	HMCES (ENSUMAG00000015093)	ENSUMAG00000015085 #15	RAB7A (ENSUMAG00000015081) #16	RPN1 (ENSUMAG00000014970) #17	GATA2 (ENSUMAG00000014913) #18	ENSUMAG00000014901 #19	EEFSEC (ENSUMAG00000014890) #21	RUVBL1 (ENSUMAG00000014877) #22	SEC61A1 (ENSUMAG00000014866) #23	KBTBD12 (ENSUMAG00000014859) #24	MGLL (ENSUMAG00000014853) #25	ABTB1 (ENSUMAG00000014845) #26	PODXL2 (ENSUMAG00000014839) #27	MCM2 (ENSUMAG00000014421) #28	TPRA1 (ENSUMAG00000014378) #29	PLXNA1 (ENSUMAG00000014352) #31	ENSUMAG00000014342	TXNRD3 (ENSUMAG00000014041) #33	ENSUMAG00000014003	UROC1 (ENSUMAG00000013982) #35	ENSUMAG00000013976 #36	ENSUMAG00000013971 #37	KLF15 (ENSUMAG00000013967)
American black bear	MODERN SPECIES	5302																RUVBL1 (ENSUAMG00000005239) #22	SEC61A1 (ENSUAMG00000005214) #23
Giant Panda	MODERN SPECIES	14	ENSAMEG00000025541	GP9 (ENSAMEG00000015373) #8	RAB43 (ENSAMEG00000015341) #9	ISY1 (ENSAMEG00000025572) #10	ENSAMEG00000015334 #11	COPG1 (ENSAMEG00000015284) #12	ENSAMEG00000015249 #16	ENSAMEG00000015269	ENSAMEG00000026307 #14	ENSAMEG00000024109 #15	ENSAMEG00000015201 #17	GATA2 (ENSAMEG00000015180) #18	DNAJB8 (ENSAMEG00000018919) #19	ENSAMEG00000028762 #20	EEFSEC (ENSAMEG00000015165) #21	RUVBL1 (ENSAMEG00000015136) #22	SEC61A1 (ENSAMEG00000015108) #23	KBTBD12 (ENSAMEG00000015099) #24	ENSAMEG00000015086 #25	ABTB1 (ENSAMEG00000015059) #26	PODXL2 (ENSAMEG00000015046) #27	MCM2 (ENSAMEG00000014998) #28	TPRA1 (ENSAMEG00000014977) #29	ENSAMEG00000019709	PLXNA1 (ENSAMEG00000006541) #31	CHCHD6 (ENSAMEG00000026556) #32	TXNRD3 (ENSAMEG00000006480) #33	ENSAMEG00000029947 #34	UROC1 (ENSAMEG00000006448) #35	ZXDC (ENSAMEG00000006438) #36	CFAP100 (ENSAMEG00000006408) #37
Mustelinae	ANCESTRAL SPECIES	18	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00940000153110.A #37
American mink	MODERN SPECIES	147	EFCC1 (ENSNVIG00000019624) #7	GP9 (ENSNVIG00000019619) #8	RAB43 (ENSNVIG00000019614) #9	ISY1 (ENSNVIG00000019590) #10	CNBP (ENSNVIG00000019564) #11	COPG1 (ENSNVIG00000018463) #12	HMCES (ENSNVIG00000018380)	H1-10 (ENSNVIG00000018376) #14	ENSNVIG00000018366 #15	ENSNVIG00000018317 #16	RPN1 (ENSNVIG00000018278) #17	GATA2 (ENSNVIG00000018256) #18	DNAJB8 (ENSNVIG00000018251) #19	ENSNVIG00000018247 #20	EEFSEC (ENSNVIG00000018235) #21	RUVBL1 (ENSNVIG00000018223) #22	S61A1 (ENSNVIG00000018169) #23	KBTBD12 (ENSNVIG00000018133) #24	MGLL (ENSNVIG00000018064) #25	ABTB1 (ENSNVIG00000018008) #26	PODXL2 (ENSNVIG00000017970) #27	MCM2 (ENSNVIG00000017938) #28	TPRA1 (ENSNVIG00000017919) #29	PLXNA1 (ENSNVIG00000017884) #31	CHCH6 (ENSNVIG00000017817) #32	TXNRD3 (ENSNVIG00000017669) #33	ENSNVIG00000017651	ENSNVIG00000017640	SPAG17 (ENSNVIG00000017552)	WDR3 (ENSNVIG00000017483)	GDAP2 (ENSNVIG00000017448)
Ferret	MODERN SPECIES	163	ACAD9 (ENSMPUG00000017287)	CFAP92 (ENSMPUG00000017299)	ENSMPUG00000017303	GP9 (ENSMPUG00000020116) #8	RAB43 (ENSMPUG00000017305) #9	ISY1 (ENSMPUG00000017307) #10	CNBP (ENSMPUG00000017315) #11	ENSMPUG00000017316 #12	HMCES (ENSMPUG00000017327)	RAB7A (ENSMPUG00000017333) #16	RPN1 (ENSMPUG00000017335) #17	ENSMPUG00000017337	GATA2 (ENSMPUG00000017338) #18	DNAJB8 (ENSMPUG00000017339) #19	EEFSEC (ENSMPUG00000017340) #21	RUVBL1 (ENSMPUG00000017341) #22	SEC61A1 (ENSMPUG00000017342) #23	KBTBD12 (ENSMPUG00000017343) #24	MGLL (ENSMPUG00000017344) #25	ABTB1 (ENSMPUG00000017345) #26	PODXL2 (ENSMPUG00000017350) #27	MCM2 (ENSMPUG00000017353) #28	TPRA1 (ENSMPUG00000017359) #29	ENSMPUG00000017360	PLXNA1 (ENSMPUG00000017363) #31	CHCHD6 (ENSMPUG00000017366) #32	TXNRD3 (ENSMPUG00000017369) #33	ENSMPUG00000017372	CHST13 (ENSMPUG00000017374) #34	UROC1 (ENSMPUG00000017376) #35	ZXDC (ENSMPUG00000017379) #36
Canidae	ANCESTRAL SPECIES		ENSGT00390000008330	ENSGT00940000163561	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT00910000147012	ENSGT00390000001542 #30	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00900000143259 #20	ENSGT00940000162567 #19	ENSGT00940000158170 #21	ENSGT00900000143336.d.a	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT00910000147012	ENSGT00390000001542 #30	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35
Dingo	MODERN SPECIES	236	GP9 (ENSCAFG00020004876) #8	RAB43 (ENSCAFG00020004871) #9	ISY1 (ENSCAFG00020004867) #10	CNBP (ENSCAFG00020004863) #11	COPG1 (ENSCAFG00020004856) #12	HMCES (ENSCAFG00020004852)	H1-10 (ENSCAFG00020004851) #14	RAB7A (ENSCAFG00020004847) #16	RPN1 (ENSCAFG00020004839) #17	ENSCAFG00020004831	GATA2 (ENSCAFG00020004824) #18	ENSCAFG00020004821 #20	DNAJB8 (ENSCAFG00020004815) #19	EEFSEC (ENSCAFG00020004811) #21	ENSCAFG00020004807	RUVBL1 (ENSCAFG00020004803) #22	SEC61A1 (ENSCAFG00020004799) #23	KBTBD12 (ENSCAFG00020004798) #24	MGLL (ENSCAFG00020004791) #25	ABTB1 (ENSCAFG00020004789) #26	PODXL2 (ENSCAFG00020004787) #27	MCM2 (ENSCAFG00020004780) #28	TPRA1 (ENSCAFG00020004776) #29	PLXNA1 (ENSCAFG00020002883) #31	CHCHD6 (ENSCAFG00020002738) #32	TXNRD3 (ENSCAFG00020001171) #33	C3orf22 (ENSCAFG00020001002)	CHST13 (ENSCAFG00020000995) #34	UROC1 (ENSCAFG00020000941) #35	ZXDC (ENSCAFG00020000879) #36	CFAP100 (ENSCAFG00020000858) #37
Dog	MODERN SPECIES	12	GP9 (ENSCAFG00845020723) #8	RAB43 (ENSCAFG00845020687) #9	ISY1 (ENSCAFG00845020556) #10	CNBP (ENSCAFG00845020423) #11	COPG1 (ENSCAFG00845019986) #12	HMCES (ENSCAFG00845019753)	H1FX (ENSCAFG00845019714) #14	RAB7A (ENSCAFG00845019242) #16	RPN1 (ENSCAFG00845019047) #17	ENSCAFG00845019001	GATA2 (ENSCAFG00845018934) #18	ENSCAFG00845018909 #20	DNAJB8 (ENSCAFG00845018870) #19	EEFSEC (ENSCAFG00845018712) #21	ENSCAFG00845018606	RUVBL1 (ENSCAFG00845018527) #22	SEC61A1 (ENSCAFG00845018244) #23	KBTBD12 (ENSCAFG00845018022) #24	MGLL (ENSCAFG00845017684) #25	ABTB1 (ENSCAFG00845013853) #26	PODXL2 (ENSCAFG00845013813) #27	MCM2 (ENSCAFG00845013762) #28	TPRA1 (ENSCAFG00845013707) #29	ENSCAFG00845013670	ENSCAFG00845013657 #30	PLXNA1 (ENSCAFG00845013076) #31	TXNRD3 (ENSCAFG00845012644) #33	C3orf22 (ENSCAFG00845012512)	CHST13 (ENSCAFG00845012493) #34	UROC1 (ENSCAFG00845012399) #35	ZXDC (ENSCAFG00845012175) #36
Red fox	MODERN SPECIES	8	ENSVVUG00000018248	GP9 (ENSVVUG00000018250) #8	RAB43 (ENSVVUG00000018253) #9	ISY1 (ENSVVUG00000018261) #10	CNBP (ENSVVUG00000018264) #11	COPG1 (ENSVVUG00000018283) #12	HMCES (ENSVVUG00000018293)	H1-10 (ENSVVUG00000018298) #14	RAB7A (ENSVVUG00000018308) #16	RPN1 (ENSVVUG00000018354) #17	GATA2 (ENSVVUG00000018360) #18	DNAJB8 (ENSVVUG00000018364) #19	ENSVVUG00000018366 #20	EEFSEC (ENSVVUG00000018372) #21	ENSVVUG00000018375	RUVBL1 (ENSVVUG00000018377) #22	SEC61A1 (ENSVVUG00000018390) #23	KBTBD12 (ENSVVUG00000018401) #24	MGLL (ENSVVUG00000018407) #25	ABTB1 (ENSVVUG00000018416) #26	PODXL2 (ENSVVUG00000018512) #27	MCM2 (ENSVVUG00000018515) #28	TPRA1 (ENSVVUG00000018518) #29	ENSVVUG00000018521 #30	PLXNA1 (ENSVVUG00000018526) #31	CHCHD6 (ENSVVUG00000018555) #32	TXNRD3 (ENSVVUG00000018617) #33	CUNH3orf22 (ENSVVUG00000021504)	UROC1 (ENSVVUG00000021508) #35	ZXDC (ENSVVUG00000021514) #36	CFAP100 (ENSVVUG00000021517) #37
Felidae	ANCESTRAL SPECIES	17	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b.w #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00940000153110.A #37
Cat	MODERN SPECIES	1	ENSFCAG00000046514	GP9 (ENSFCAG00000028803) #8	RAB43 (ENSFCAG00000042938) #9	ISY1 (ENSFCAG00000008664) #10	CNBP (ENSFCAG00000042197) #11	COPG1 (ENSFCAG00000002080) #12	HMCES (ENSFCAG00000045478)	H1-10 (ENSFCAG00000044498) #14	ENSFCAG00000033094 #15	ENSFCAG00000022971 #16	RPN1 (ENSFCAG00000008222) #17	GATA2 (ENSFCAG00000006154) #18	DNAJB8 (ENSFCAG00000001739) #19	ENSFCAG00000045815 #20	EEFSEC (ENSFCAG00000006153) #21	RUVBL1 (ENSFCAG00000008821) #22	SEC61A1 (ENSFCAG00000008819) #23	KBTBD12 (ENSFCAG00000022102) #24	MGLL (ENSFCAG00000026204) #25	ABTB1 (ENSFCAG00000013553) #26	TPRA1 (ENSFCAG00000028259) #29	MCM2 (ENSFCAG00000013550) #28	PLXNA1 (ENSFCAG00000000976) #31	TXNRD3 (ENSFCAG00000000974) #33	ENSFCAG00000049526	CHST13 (ENSFCAG00000032669) #34	UROC1 (ENSFCAG00000015746) #35	ZXDC (ENSFCAG00000015744) #36	CFAP100 (ENSFCAG00000015734) #37	KLF15 (ENSFCAG00000015732)	ENSFCAG00000001776
Panthera	ANCESTRAL SPECIES	1	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b.w #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00940000153110.A #37
Tiger	MODERN SPECIES	564											RPN1 (ENSPTIG00000013813) #17	GATA2 (ENSPTIG00000013832) #18	DNAJB8 (ENSPTIG00000009261) #19	ENSPTIG00000013847 #20	EEFSEC (ENSPTIG00000013855) #21	RUVBL1 (ENSPTIG00000013864) #22	SEC61A1 (ENSPTIG00000013892) #23	KBTBD12 (ENSPTIG00000013942) #24	MGLL (ENSPTIG00000013965) #25	ABTB1 (ENSPTIG00000013992) #26	PODXL2 (ENSPTIG00000014008) #27	MCM2 (ENSPTIG00000014022) #28	TPRA1 (ENSPTIG00000014035) #29	PLXNA1 (ENSPTIG00000014058) #31	CHCHD6 (ENSPTIG00000014085) #32	TXNRD3 (ENSPTIG00000014110) #33	C3orf22 (ENSPTIG00000014195)	UROC1 (ENSPTIG00000014212) #35	ZXDC (ENSPTIG00000014220) #36	CFAP100 (ENSPTIG00000014234) #37	KLF15 (ENSPTIG00000014256)
Panthera_a	ANCESTRAL SPECIES		ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00390000007704 #15	ENSGT00940000155864.a.b.w #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00940000153110.A #37
lion	MODERN SPECIES	2	EFCC1 (ENSPLOG00000003589) #7	GP9 (ENSPLOG00000003607) #8	RAB43 (ENSPLOG00000003618) #9	ISY1 (ENSPLOG00000003627) #10	CNBP (ENSPLOG00000003644) #11	COPG1 (ENSPLOG00000003685) #12	HMCES (ENSPLOG00000003766)	H1-10 (ENSPLOG00000003787) #14	ENSPLOG00000003798 #15	ENSPLOG00000003821 #16	RPN1 (ENSPLOG00000003850) #17	GATA2 (ENSPLOG00000003865) #18	DNAJB8 (ENSPLOG00000003879) #19	ENSPLOG00000003882 #20	EEFSEC (ENSPLOG00000003896) #21	RUVBL1 (ENSPLOG00000003920) #22	SEC61A1 (ENSPLOG00000004023) #23	KBTBD12 (ENSPLOG00000004046) #24	MGLL (ENSPLOG00000004066) #25	ABTB1 (ENSPLOG00000004091) #26	PODXL2 (ENSPLOG00000004100) #27	MCM2 (ENSPLOG00000004115) #28	TPRA1 (ENSPLOG00000004134) #29	PLXNA1 (ENSPLOG00000004165) #31	CHCHD6 (ENSPLOG00000004177) #32	TXNRD3 (ENSPLOG00000004215) #33	C3orf22 (ENSPLOG00000004263)	CHST13 (ENSPLOG00000004278) #34	UROC1 (ENSPLOG00000004294) #35	ZXDC (ENSPLOG00000004315) #36	CFAP100 (ENSPLOG00000004337) #37
leopard	MODERN SPECIES	135	ENSPPRG00000011028 #8	RAB43 (ENSPPRG00000003497) #9	ISY1 (ENSPPRG00000003480) #10	CNBP (ENSPPRG00000003431) #11	COPG1 (ENSPPRG00000003340) #12	HMCES (ENSPPRG00000003160)	H1-10 (ENSPPRG00000011017) #14	ENSPPRG00000011010 #15	ENSPPRG00000003104 #16	RPN1 (ENSPPRG00000003007) #17	GATA2 (ENSPPRG00000002963) #18	DNAJB8 (ENSPPRG00000011004) #19	ENSPPRG00000002912 #20	EEFSEC (ENSPPRG00000002846) #21	ENSPPRG00000002794 #21	RUVBL1 (ENSPPRG00000002788) #22	SEC61A1 (ENSPPRG00000002652) #23	KBTBD12 (ENSPPRG00000002619) #24	MGLL (ENSPPRG00000002430) #25	ABTB1 (ENSPPRG00000002183) #26	PODXL2 (ENSPPRG00000002169) #27	MCM2 (ENSPPRG00000002132) #28	TPRA1 (ENSPPRG00000002097) #29	PLXNA1 (ENSPPRG00000002031) #31	TXNRD3 (ENSPPRG00000001957) #33	C3orf22 (ENSPPRG00000001767)	CHST13 (ENSPPRG00000001750) #34	UROC1 (ENSPPRG00000001664) #35	ZXDC (ENSPPRG00000001552) #36	CFAP100 (ENSPPRG00000001466) #37	KLF15 (ENSPPRG00000001430)
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00390000007219	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Suina	ANCESTRAL SPECIES	1	ENSGT00390000008330	ENSGT00940000163561	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630 #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00940000160450	ENSGT00390000017582	ENSGT01030000234667.a.a.a.b
Chacoan peccary	MODERN SPECIES	949	CFAP92 (ENSCWAG00000018972)	ENSCWAG00000019031	GP9 (ENSCWAG00000019065) #8	RAB43 (ENSCWAG00000019074) #9	ISY1 (ENSCWAG00000019087) #10	CNBP (ENSCWAG00000019116) #11	COPG1 (ENSCWAG00000019186) #12	HMCES (ENSCWAG00000019226)	H1-10 (ENSCWAG00000019275) #14	RAB7A (ENSCWAG00000019290) #16	RPN1 (ENSCWAG00000019356) #17	GATA2 (ENSCWAG00000019399) #18	DNAJB8 (ENSCWAG00000019451) #19	ENSCWAG00000019462 #20	EEFSEC (ENSCWAG00000019470) #21	RUVBL1 (ENSCWAG00000019553) #22	SEC61A1 (ENSCWAG00000019570) #23	KBTBD12 (ENSCWAG00000019608) #24	MGLL (ENSCWAG00000019660) #25	ABTB1 (ENSCWAG00000019756) #26	PODXL2 (ENSCWAG00000019774) #27	MCM2 (ENSCWAG00000019787) #28	TPRA1 (ENSCWAG00000019837) #29
Pig	MODERN SPECIES	4	CFAP92 (ENSSSCG00000024552)	ENSSSCG00000024000	GP9 (ENSSSCG00000031176) #8	RAB43 (ENSSSCG00000037568) #9	ISY1 (ENSSSCG00000038900) #10	CNBP (ENSSSCG00000040879) #11	COPG1 (ENSSSCG00000011616) #12	HMCES (ENSSSCG00000011611)	H1-10 (ENSSSCG00000061599) #14	RAB7A (ENSSSCG00000011615) #16	RPN1 (ENSSSCG00000011612) #17	GATA2 (ENSSSCG00000011618) #18	DNAJB8 (ENSSSCG00000058052) #19	ENSSSCG00000011617 #20	EEFSEC (ENSSSCG00000011619) #21	RUVBL1 (ENSSSCG00000011620) #22	SEC61A1 (ENSSSCG00000011621) #23	KBTBD12 (ENSSSCG00000011622) #24	ENSSSCG00000054607	MGLL (ENSSSCG00000024134) #25	ABTB1 (ENSSSCG00000024827) #26	PODXL2 (ENSSSCG00000021397) #27	MCM2 (ENSSSCG00000011624) #28	TPRA1 (ENSSSCG00000011623) #29	PLXNA1 (ENSSSCG00000024001) #31	CHCHD6 (ENSSSCG00000031557) #32	TXNRD3 (ENSSSCG00000023929) #33	ENSSSCG00000045066	ENSSSCG00000011626	CHST13 (ENSSSCG00000011625) #34	ENSSSCG00000056342
Artiodactyla_a	ANCESTRAL SPECIES	18	ENSGT00390000007219	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.i.a #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Camelidae	ANCESTRAL SPECIES	7	ENSGT00390000009491.d	ENSGT00940000156915	ENSGT00940000157312	ENSGT00390000007219	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.i.a #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b	ENSGT00940000160913	ENSGT00940000156977
Arabian camel	MODERN SPECIES	8	NUP210 (ENSCDRG00005005049)	IQSEC1 (ENSCDRG00005007783)	ACAD9 (ENSCDRG00005009090)	ENSCDRG00005009274	RAB43 (ENSCDRG00005009894) #9	ISY1 (ENSCDRG00005009942) #10	CNBP (ENSCDRG00005010027) #11	COPG1 (ENSCDRG00005010147) #12	HMCES (ENSCDRG00005010445)	H1-10 (ENSCDRG00005010548) #14	RAB7A (ENSCDRG00005010579) #16	RPN1 (ENSCDRG00005010840) #17	GATA2 (ENSCDRG00005010903) #18	ENSCDRG00005010941 #19	EEFSEC (ENSCDRG00005010991) #21	RUVBL1 (ENSCDRG00005011446) #22	SEC61A1 (ENSCDRG00005011502) #23	KBTBD12 (ENSCDRG00005011561) #24	MGLL (ENSCDRG00005011712) #25	ABTB1 (ENSCDRG00005012018) #26	PODXL2 (ENSCDRG00005012159) #27	MCM2 (ENSCDRG00005012229) #28	TPRA1 (ENSCDRG00005012385) #29	PLXNA1 (ENSCDRG00005012667) #31	CHCHD6 (ENSCDRG00005016897) #32	TXNRD3 (ENSCDRG00005016948) #33	UROC1 (ENSCDRG00005017069) #35	ENSCDRG00005017119 #36	SLC41A3 (ENSCDRG00005017182)	ALDH1L1 (ENSCDRG00005017361)	KLF15 (ENSCDRG00005017650)
Artiodactyla_b	ANCESTRAL SPECIES	21	ENSGT00390000007219	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.i.a #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Pecora	ANCESTRAL SPECIES	17	ENSGT00390000007219	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.i.a #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Percora_a	ANCESTRAL SPECIES	19	ENSGT00390000007219	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.i.a #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Bovidae	ANCESTRAL SPECIES	19	ENSGT00390000007219	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.i.a #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Caprinae	ANCESTRAL SPECIES	15	ENSGT00390000008330	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.i.a #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Goat	MODERN SPECIES	14	NUP210 (ENSCHIG00000018468)	IQSEC1 (ENSCHIG00000025033)	ACAD9 (ENSCHIG00000020865)	ENSCHIG00000011159	ENSCHIG00000011214	EFCC1 (ENSCHIG00000010869) #7	RAB43 (ENSCHIG00000003247) #9	ISY1 (ENSCHIG00000008237) #10	CNBP (ENSCHIG00000023083) #11	COPG1 (ENSCHIG00000010891) #12	HMCES (ENSCHIG00000018264)	RAB7A (ENSCHIG00000001138) #16	ENSCHIG00000007449 #17	GATA2 (ENSCHIG00000014779) #18	EEFSEC (ENSCHIG00000021838) #21	RUVBL1 (ENSCHIG00000019299) #22	SEC61A1 (ENSCHIG00000010014) #23	KBTBD12 (ENSCHIG00000020444) #24	MGLL (ENSCHIG00000011090) #25	ABTB1 (ENSCHIG00000015051) #26	ENSCHIG00000012154 #31	ENSCHIG00000009222 #32	TXNRD3 (ENSCHIG00000009074) #33	ENSCHIG00000024553	CHST13 (ENSCHIG00000022391) #34	UROC1 (ENSCHIG00000010303) #35	ZXDC (ENSCHIG00000007131) #36	SLC41A3 (ENSCHIG00000014946)	ALDH1L1 (ENSCHIG00000007932)	KLF15 (ENSCHIG00000022291)	CFAP100 (ENSCHIG00000013384) #37
Rambouillet Sheep	MODERN SPECIES	10	EFCC1 (ENSOARG00020015940) #7	GP9 (ENSOARG00020015968) #8	RAB43 (ENSOARG00020015993) #9	ISY1 (ENSOARG00020016029) #10	CNBP (ENSOARG00020016289) #11	COPG1 (ENSOARG00020016461) #12	HMCES (ENSOARG00020016666)	H1-10 (ENSOARG00020016747) #14	ENSOARG00020016757	RAB7A (ENSOARG00020016775) #16	ENSOARG00020017009 #17	GATA2 (ENSOARG00020017118) #18	DNAJB8 (ENSOARG00020017252) #19	ENSOARG00020017282 #20	EEFSEC (ENSOARG00020017339) #21	RUVBL1 (ENSOARG00020017524) #22	SEC61A1 (ENSOARG00020017586) #23	KBTBD12 (ENSOARG00020017695) #24	MGLL (ENSOARG00020017820) #25	ENSOARG00020018222	PODXL2 (ENSOARG00020018264) #27	MCM2 (ENSOARG00020018340) #28	TPRA1 (ENSOARG00020018474) #29	PLXNA1 (ENSOARG00020018631) #31	ENSOARG00020019013 #32	TXNRD3 (ENSOARG00020019156) #33	ENSOARG00020019263	CHST13 (ENSOARG00020019293) #34	UROC1 (ENSOARG00020019321) #35	SLC41A3 (ENSOARG00020019589)	ENSOARG00020019756
Bovinae	ANCESTRAL SPECIES	16	ENSGT00390000007219	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.i.a #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Bos	ANCESTRAL SPECIES	16	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00950000183010.a.b.a.a.a.a.a.a.a.b.a	ENSGT00390000009630.i.a #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Bos_a	ANCESTRAL SPECIES	9	ENSGT00940000156915	ENSGT00940000157312	ENSGT00390000008330	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00950000183010.a.b.a.a.a.a.a.a.a.b.a	ENSGT00390000009630.i.a #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Wild yak	MODERN SPECIES	45														ENSBMUG00000025686 #19	EEFSEC (ENSBMUG00000025680) #21	RUVBL1 (ENSBMUG00000025672) #22	SEC61A1 (ENSBMUG00000025666) #23
Domestic yak	MODERN SPECIES	14	IQSEC1 (ENSBGRG00000015000)	ACAD9 (ENSBGRG00000014463)	ENSBGRG00000014318	ENSBGRG00000014265 #9	ISY1 (ENSBGRG00000014042) #10	CNBP (ENSBGRG00000013907) #11	COPG1 (ENSBGRG00000013407) #12	HMCES (ENSBGRG00000013212)	ENSBGRG00000013189 #14	RAB7A (ENSBGRG00000013027) #16	ENSBGRG00000012940	RPN1 (ENSBGRG00000012844) #17	ENSBGRG00000012704 #18	ENSBGRG00000012674 #19	EEFSEC (ENSBGRG00000012475) #21	RUVBL1 (ENSBGRG00000012210) #22	SEC61A1 (ENSBGRG00000011620) #23	KBTBD12 (ENSBGRG00000011463) #24	ENSBGRG00000011409	ENSBGRG00000011063 #25	PODXL2 (ENSBGRG00000010818) #27	MCM2 (ENSBGRG00000010580) #28	ENSBGRG00000026549 #29	PLXNA1 (ENSBGRG00000025111) #31	CHCHD6 (ENSBGRG00000024662) #32	TXNRD3 (ENSBGRG00000023918) #33	ENSBGRG00000023833	CHST13 (ENSBGRG00000023785) #34	UROC1 (ENSBGRG00000023472) #35	ZXDC (ENSBGRG00000023297) #36	SLC41A3 (ENSBGRG00000023166)
Bos_b	ANCESTRAL SPECIES	17	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00950000183010.a.b.a.a.a.a.a.a.a.b.a	ENSGT00390000009630.i.a #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Cow	MODERN SPECIES	14	EFCC1 (ENSBTAG00000005922) #7	GP9 (ENSBTAG00000014666) #8	RAB43 (ENSBTAG00000053386) #9	ISY1 (ENSBTAG00000030915) #10	CNBP (ENSBTAG00000012159) #11	COPG1 (ENSBTAG00000013212) #12	HMCES (ENSBTAG00000030930)	H1-10 (ENSBTAG00000040116) #14	RAB7A (ENSBTAG00000010193) #16	ENSBTAG00000030941	RPN1 (ENSBTAG00000005191) #17	GATA2 (ENSBTAG00000019707) #18	DNAJB8 (ENSBTAG00000006179) #19	ENSBTAG00000051049 #20	EEFSEC (ENSBTAG00000030962) #21	RUVBL1 (ENSBTAG00000020998) #22	SEC61A1 (ENSBTAG00000004937) #23	KBTBD12 (ENSBTAG00000011547) #24	MGLL (ENSBTAG00000018248) #25	ABTB1 (ENSBTAG00000018238) #26	PODXL2 (ENSBTAG00000018031) #27	MCM2 (ENSBTAG00000014380) #28	TPRA1 (ENSBTAG00000022575) #29	PLXNA1 (ENSBTAG00000009159) #31	CHCHD6 (ENSBTAG00000030855) #32	TXNRD3 (ENSBTAG00000011795) #33	C22H3orf22 (ENSBTAG00000039194)	CHST13 (ENSBTAG00000008778) #34	UROC1 (ENSBTAG00000008774) #35	ZXDC (ENSBTAG00000009874) #36	SLC41A3 (ENSBTAG00000005617)
Hybrid Bos Indicus	MODERN SPECIES	14	EFCC1 (ENSBIXG00005028776) #7	ENSBIXG00005028788 #8	RAB43 (ENSBIXG00005005001) #9	ISY1 (ENSBIXG00005028914) #10	CNBP (ENSBIXG00005028946) #11	COPG1 (ENSBIXG00005028959) #12	HMCES (ENSBIXG00005028993)	H1-10 (ENSBIXG00005005106) #14	RAB7A (ENSBIXG00005029044) #16	ENSBIXG00005005134	RPN1 (ENSBIXG00005001966) #17	GATA2 (ENSBIXG00005010558) #18	DNAJB8 (ENSBIXG00005010579) #19	ENSBIXG00005000713 #20	EEFSEC (ENSBIXG00005010586) #21	RUVBL1 (ENSBIXG00005010629) #22	SEC61A1 (ENSBIXG00005000921) #23	KBTBD12 (ENSBIXG00005010709) #24	MGLL (ENSBIXG00005010790) #25	ENSBIXG00005010805	PODXL2 (ENSBIXG00005010863) #27	MCM2 (ENSBIXG00005010892) #28	ENSBIXG00005000580 #29	PLXNA1 (ENSBIXG00005001001) #31	ENSBIXG00005011053 #32	TXNRD3 (ENSBIXG00005011121) #33	ENSBIXG00005001025	CHST13 (ENSBIXG00005011148) #34	UROC1 (ENSBIXG00005001051) #35	ZXDC (ENSBIXG00005011270) #36	SLC41A3 (ENSBIXG00005007101)
American bison	MODERN SPECIES	2749														GATA2 (ENSBBBG00000013443) #18	EEFSEC (ENSBBBG00000002762) #21	RUVBL1 (ENSBBBG00000013546) #22	ENSBBBG00000013587 #23	KBTBD12 (ENSBBBG00000013616) #24
Siberian musk deer	MODERN SPECIES	1221	CFAP92 (ENSMMSG00000023592)	ENSMMSG00000023579	GP9 (ENSMMSG00000023574) #8	ENSMMSG00000023537 #9	ISY1 (ENSMMSG00000023521) #10	CNBP (ENSMMSG00000023497) #11	COPG1 (ENSMMSG00000023481) #12	HMCES (ENSMMSG00000023468)	H1-10 (ENSMMSG00000023463) #14	RAB7A (ENSMMSG00000023438) #16	RPN1 (ENSMMSG00000023428) #17	GATA2 (ENSMMSG00000023419) #18	ENSMMSG00000023414 #20	DNAJB8 (ENSMMSG00000023410) #19	EEFSEC (ENSMMSG00000023389) #21	RUVBL1 (ENSMMSG00000023371) #22	SEC61A1 (ENSMMSG00000023354) #23	ENSMMSG00000023346 #24	MGLL (ENSMMSG00000023285) #25	ABTB1 (ENSMMSG00000023252) #26	PODXL2 (ENSMMSG00000023244) #27	KLF15 (ENSMMSG00000023237)	ALDH1L1 (ENSMMSG00000023038)	SLC41A3 (ENSMMSG00000022992)	ZXDC (ENSMMSG00000022936) #36	UROC1 (ENSMMSG00000022908) #35	CHST13 (ENSMMSG00000022897) #34	ENSMMSG00000022891	TXNRD3 (ENSMMSG00000022805) #33	ENSMMSG00000022778 #32
Yarkand deer	MODERN SPECIES	16	CFAP92 (ENSCHYG00000020007)	ENSCHYG00000019920	GP9 (ENSCHYG00000019898) #8	RAB43 (ENSCHYG00000019854) #9	ISY1 (ENSCHYG00000019525) #10	CNBP (ENSCHYG00000019384) #11	COPG1 (ENSCHYG00000019018) #12	HMCES (ENSCHYG00000018936)	H1-10 (ENSCHYG00000018910) #14	ENSCHYG00000018740 #16	ENSCHYG00000018559 #17	GATA2 (ENSCHYG00000018476) #18	ENSCHYG00000018454	DNAJB8 (ENSCHYG00000018438) #19	EEFSEC (ENSCHYG00000018386) #21	RUVBL1 (ENSCHYG00000017903) #22	SEC61A1 (ENSCHYG00000017378) #23	ENSCHYG00000017330	KBTBD12 (ENSCHYG00000017212) #24	MGLL (ENSCHYG00000016817) #25	ABTB1 (ENSCHYG00000016715) #26	PODXL2 (ENSCHYG00000016661) #27	MCM2 (ENSCHYG00000016311) #28	TPRA1 (ENSCHYG00000016085) #29	ENSCHYG00000015704 #31	ENSCHYG00000015490 #32	TXNRD3 (ENSCHYG00000015385) #33	CHST13 (ENSCHYG00000015340) #34	UROC1 (ENSCHYG00000014990) #35	ZXDC (ENSCHYG00000014680) #36	SLC41A3 (ENSCHYG00000014509)
Cetacea	DUPLICATION
Cetacea	ANCESTRAL SPECIES																	ENSGT00940000153556.A.a #22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00940000153556.A.a #22
Sperm whale	MODERN SPECIES	743																ENSPCTG00005013988 #22
Cetacea	DUPLICATION
Cetacea	ANCESTRAL SPECIES	7	ENSGT00390000008330	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.j #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A.b.a #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00390000008330	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.j #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A.b.a #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00390000008330	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439.d	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.j #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A.b.a #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Dolphin	MODERN SPECIES	723														GATA2 (ENSTTRG00000000998) #18	EEFSEC (ENSTTRG00000000994) #21	RUVBL1 (ENSTTRG00000000993) #22	SEC61A1 (ENSTTRG00000000991) #23
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00390000008330	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439.d	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.j #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00900000143259 #20	ENSGT00940000158170 #21	ENSGT00940000153556.A.b.a #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216 #36	ENSGT00950000183042.b
Vaquita	MODERN SPECIES	2	CFAP92 (ENSPSNG00000022693)	EFCC1 (ENSPSNG00000022692) #7	GP9 (ENSPSNG00000022691) #8	RAB43 (ENSPSNG00000022690) #9	ISY1 (ENSPSNG00000022689) #10	CNBP (ENSPSNG00000022688) #11	COPG1 (ENSPSNG00000022687) #12	HMCES (ENSPSNG00000022686)	H1-10 (ENSPSNG00000022685) #14	RAB7A (ENSPSNG00000022683) #16	RPN1 (ENSPSNG00000022682) #17	GATA2 (ENSPSNG00000022681) #18	DNAJB8 (ENSPSNG00000022680) #19	ENSPSNG00000022679 #20	EEFSEC (ENSPSNG00000022678) #21	ENSPSNG00000022677 #22	SEC61A1 (ENSPSNG00000022676) #23	ENSPSNG00000022674 #24	MGLL (ENSPSNG00000022673) #25	ABTB1 (ENSPSNG00000022671) #26	PODXL2 (ENSPSNG00000022670) #27	MCM2 (ENSPSNG00000022669) #28	TPRA1 (ENSPSNG00000022668) #29	PLXNA1 (ENSPSNG00000022666) #31	ENSPSNG00000022665	TXNRD3 (ENSPSNG00000022664) #33	ENSPSNG00000022663	CHST13 (ENSPSNG00000022662) #34	UROC1 (ENSPSNG00000022661) #35	ZXDC (ENSPSNG00000022660) #36	SLC41A3 (ENSPSNG00000022659)
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00390000008330	ENSGT00940000163561	ENSGT00950000183014.f.b.a.b #7	ENSGT00530000064244.a #8	ENSGT00940000161980 #9	ENSGT00390000014109 #10	ENSGT00950000183041.A.e #11	ENSGT00390000016313.a.b #12	ENSGT00390000018439.d	ENSGT00730000111536 #14	ENSGT00940000155864.a.b #16	ENSGT00390000009630.j #17	ENSGT00940000156315 #18	ENSGT00940000162567 #19	ENSGT00940000158170 #21	ENSGT00940000153556.A.b.a #22	ENSGT00390000003721.d.a #23	ENSGT00940000156836 #24	ENSGT00390000011364 #25	ENSGT00390000017131 #26	ENSGT00730000111323 #27	ENSGT01050000244824.F #28	ENSGT00390000016807 #29	ENSGT01050000244850.A.b #31	ENSGT00390000000903.b #32	ENSGT00940000159178 #33	ENSGT00390000004778	ENSGT00940000161154 #34	ENSGT00390000015136 #35	ENSGT00940000162216.a #36	ENSGT00950000183042.b
Narwhal	MODERN SPECIES	310	CFAP92 (ENSMMNG00015013200)	EFCC1 (ENSMMNG00015013211) #7	GP9 (ENSMMNG00015013220) #8	RAB43 (ENSMMNG00015013271) #9	ISY1 (ENSMMNG00015013280) #10	ENSMMNG00015013291	CNBP (ENSMMNG00015013299) #11	COPG1 (ENSMMNG00015013321) #12	HMCES (ENSMMNG00015013354)	H1-10 (ENSMMNG00015013367) #14	RAB7A (ENSMMNG00015013387) #16	RPN1 (ENSMMNG00015013416) #17	GATA2 (ENSMMNG00015013442) #18	EEFSEC (ENSMMNG00015013459) #21	DNAJB8 (ENSMMNG00015013478) #19	ENSMMNG00015013489 #22	SEC61A1 (ENSMMNG00015013516) #23	KBTBD12 (ENSMMNG00015013549) #24	ENSMMNG00015013585 #25	ABTB1 (ENSMMNG00015013635) #26	PODXL2 (ENSMMNG00015013667) #27	MCM2 (ENSMMNG00015014295) #28	TPRA1 (ENSMMNG00015014317) #29	PLXNA1 (ENSMMNG00015014355) #31	ENSMMNG00015014396	TXNRD3 (ENSMMNG00015014461) #33	CHST13 (ENSMMNG00015014619) #34	UROC1 (ENSMMNG00015014633) #35	ENSMMNG00015014677 #36	SLC41A3 (ENSMMNG00015014716)	ALDH1L1 (ENSMMNG00015014798)
Beluga whale	MODERN SPECIES	66	CFAP92 (ENSDLEG00000010066)	ENSDLEG00000010210	GP9 (ENSDLEG00000010224) #8	RAB43 (ENSDLEG00000010230) #9	ISY1 (ENSDLEG00000010246) #10	ENSDLEG00000010293	CNBP (ENSDLEG00000010302) #11	COPG1 (ENSDLEG00000010326) #12	HMCES (ENSDLEG00000010426)	H1-10 (ENSDLEG00000010459) #14	RAB7A (ENSDLEG00000010466) #16	RPN1 (ENSDLEG00000010491) #17	GATA2 (ENSDLEG00000010521) #18	EEFSEC (ENSDLEG00000010534) #21	DNAJB8 (ENSDLEG00000010568) #19	RUVBL1 (ENSDLEG00000010575) #22	SEC61A1 (ENSDLEG00000010591) #23	KBTBD12 (ENSDLEG00000010611) #24	MGLL (ENSDLEG00000010650) #25	ABTB1 (ENSDLEG00000010723) #26	ENSDLEG00000010743	ENSDLEG00000010753 #27	MCM2 (ENSDLEG00000010766) #28	TPRA1 (ENSDLEG00000010809) #29	ENSDLEG00000010846	PLXNA1 (ENSDLEG00000010868) #31	CHCHD6 (ENSDLEG00000010964) #32	TXNRD3 (ENSDLEG00000011052) #33	ENSDLEG00000012121	CHST13 (ENSDLEG00000012133) #34	UROC1 (ENSDLEG00000012148) #35
Sperm whale	MODERN SPECIES	9	XPC (ENSPCTG00005021979)	WNT7A (ENSPCTG00005021969)	FBLN2 (ENSPCTG00005021931)	IQSEC1 (ENSPCTG00005021839)	ACAD9 (ENSPCTG00005021782)	CFAP92 (ENSPCTG00005021671)	EFCC1 (ENSPCTG00005021614) #7	GP9 (ENSPCTG00005021605) #8	RAB43 (ENSPCTG00005021593) #9	CNBP (ENSPCTG00005021559) #11	RAB7A (ENSPCTG00005021510) #16	EEFSEC (ENSPCTG00005021497) #21	RPN1 (ENSPCTG00005021424) #17	GATA2 (ENSPCTG00005021380) #18	ENSPCTG00005021354 #21	RUVBL1 (ENSPCTG00005021315) #22	SEC61A1 (ENSPCTG00005021231) #23	KBTBD12 (ENSPCTG00005021183) #24	MGLL (ENSPCTG00005021055) #25	ABTB1 (ENSPCTG00005020971) #26	ENSPCTG00005020956	PODXL2 (ENSPCTG00005020915) #27	MCM2 (ENSPCTG00005020839) #28	CFAP100 (ENSPCTG00005020699) #37	KLF15 (ENSPCTG00005020670)	ALDH1L1 (ENSPCTG00005020145)	ENSPCTG00005020094	ENSPCTG00005020054	SLC41A3 (ENSPCTG00005019856)	ZXDC (ENSPCTG00005019762) #36	UROC1 (ENSPCTG00005019468) #35
Blue whale	MODERN SPECIES	2	ACAD9 (ENSBMSG00010012123)	CFAP92 (ENSBMSG00010012178)	EFCC1 (ENSBMSG00010012255) #7	GP9 (ENSBMSG00010012325) #8	RAB43 (ENSBMSG00010012334) #9	ISY1 (ENSBMSG00010012343) #10	CNBP (ENSBMSG00010012370) #11	COPG1 (ENSBMSG00010012394) #12	HMCES (ENSBMSG00010012470)	H1-10 (ENSBMSG00010012485) #14	RAB7A (ENSBMSG00010012513) #16	RPN1 (ENSBMSG00010012549) #17	GATA2 (ENSBMSG00010012574) #18	EEFSEC (ENSBMSG00010012611) #21	DNAJB8 (ENSBMSG00010012656) #19	ENSBMSG00010012665 #22	SEC61A1 (ENSBMSG00010012693) #23	KBTBD12 (ENSBMSG00010012727) #24	MGLL (ENSBMSG00010012751) #25	ABTB1 (ENSBMSG00010012797) #26	PODXL2 (ENSBMSG00010012808) #27	MCM2 (ENSBMSG00010012822) #28	TPRA1 (ENSBMSG00010012862) #29	PLXNA1 (ENSBMSG00010012942) #31	CHCHD6 (ENSBMSG00010008862) #32	TXNRD3 (ENSBMSG00010008948) #33	ENSBMSG00010009042	CHST13 (ENSBMSG00010009052) #34	UROC1 (ENSBMSG00010009072) #35	ZXDC (ENSBMSG00010009104) #36	SLC41A3 (ENSBMSG00010009132)
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000156385	ENSGT00940000153168.C.a.a	ENSGT00940000156071	ENSGT00950000182810.A.b	ENSGT00940000158849	ENSGT00940000160067	ENSGT00940000160864	ENSGT00390000012163	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153556.A.b.b #22	ENSGT00940000153713.B.d	ENSGT00530000064228	ENSGT00420000029848.B	ENSGT00390000011484	ENSGT00510000048608	ENSGT00940000162856	ENSGT00530000064225	ENSGT00940000165308	ENSGT00400000023784	ENSGT00940000161876	ENSGT00530000064312	ENSGT00950000182965.a.b.b.a	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT00940000159538
Blue whale	MODERN SPECIES	14	ENSBMSG00010003719	KCTD16 (ENSBMSG00010003732)	PRELID2 (ENSBMSG00010003746)	GRXCR2 (ENSBMSG00010003760)	SH3RF2 (ENSBMSG00010003783)	PLAC8L1 (ENSBMSG00010003800)	LARS1 (ENSBMSG00010003837)	RBM27 (ENSBMSG00010003903)	POU4F3 (ENSBMSG00010003939)	TCERG1 (ENSBMSG00010004023)	GPR151 (ENSBMSG00010004103)	PPP2R2B (ENSBMSG00010004212)	ENSBMSG00010004370	STK32A (ENSBMSG00010000035)	DPYSL3 (ENSBMSG00010000062)	ENSBMSG00010000102 #22	JAKMIP2 (ENSBMSG00010000163)	SPINK1 (ENSBMSG00010000202)	SCGB3A2 (ENSBMSG00010000232)	C5orf46 (ENSBMSG00010000246)	SPINK5 (ENSBMSG00010000284)	ENSBMSG00010000343	ENSBMSG00010000359	SPINK6 (ENSBMSG00010000377)	ENSBMSG00010000399	SPINK13 (ENSBMSG00010000418)	SPINK7 (ENSBMSG00010000439)	FBXO38 (ENSBMSG00010000482)	HTR4 (ENSBMSG00010000543)	ADRB2 (ENSBMSG00010000651)	SH3TC2 (ENSBMSG00010000673)
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000162690.g	ENSGT00940000156071	ENSGT00950000182810.A.b	ENSGT00940000158849	ENSGT01010000228946	ENSGT00940000160067	ENSGT00940000160864	ENSGT00390000012163	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153556.A.b.b #22	ENSGT00940000153713.B.d	ENSGT00530000064228	ENSGT00420000029848.B	ENSGT00390000011484	ENSGT00510000048608	ENSGT00940000162856	ENSGT00530000064225	ENSGT00940000165308	ENSGT00400000023784	ENSGT00940000161876	ENSGT00530000064312	ENSGT00950000182965.a.b.b.a	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT00940000159538
Sperm whale	MODERN SPECIES	19	ENSPCTG00005002042	ENSPCTG00005002068	GRXCR2 (ENSPCTG00005002131)	ENSPCTG00005002139	SH3RF2 (ENSPCTG00005002153)	PLAC8L1 (ENSPCTG00005002187)	LARS (ENSPCTG00005002244)	RBM27 (ENSPCTG00005002371)	POU4F3 (ENSPCTG00005002418)	TCERG1 (ENSPCTG00005002471)	GPR151 (ENSPCTG00005002624)	PPP2R2B (ENSPCTG00005002696)	STK32A (ENSPCTG00005002874)	ENSPCTG00005002903	ENSPCTG00005002917	ENSPCTG00005002929 #22	JAKMIP2 (ENSPCTG00005002993)	SPINK1 (ENSPCTG00005003163)	SCGB3A2 (ENSPCTG00005003173)	C8H5orf46 (ENSPCTG00005003184)	SPINK5 (ENSPCTG00005003196)	SPINK14 (ENSPCTG00005003207)	SPINK6 (ENSPCTG00005003225)	ENSPCTG00005003234	SPINK13 (ENSPCTG00005003241)	SPINK7 (ENSPCTG00005003251)	SPINK9 (ENSPCTG00005003264)	ENSPCTG00005003282	FBXO38 (ENSPCTG00005003322)	HTR4 (ENSPCTG00005003439)	SH3TC2 (ENSPCTG00005003526)
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000162690.g	ENSGT00940000156071	ENSGT00950000182810.A.b	ENSGT00940000158849	ENSGT01010000228946	ENSGT00940000160067	ENSGT00940000160864	ENSGT00390000012163	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153556.A.b.b #22	ENSGT00940000153713.B.d	ENSGT00530000064228	ENSGT00420000029848.B	ENSGT00390000011484	ENSGT00510000048608	ENSGT00940000162856	ENSGT00530000064225	ENSGT00940000165308	ENSGT00400000023784	ENSGT00940000161876	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000162690.g	ENSGT00940000156071	ENSGT00950000182810.A.b	ENSGT00940000158849	ENSGT01010000228946	ENSGT00940000160067	ENSGT00940000160864	ENSGT00390000012163	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153556.A.b.b #22	ENSGT00940000153713.B.d	ENSGT00530000064228	ENSGT00420000029848.B	ENSGT00390000011484	ENSGT00510000048608	ENSGT00940000162856	ENSGT00530000064225	ENSGT00940000165308	ENSGT00400000023784	ENSGT00940000161876	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00940000162690.g	ENSGT00940000156071	ENSGT00950000182810.A.b	ENSGT00940000158849	ENSGT01010000228946	ENSGT00940000160067	ENSGT00940000160864	ENSGT00390000012163	ENSGT00510000046929.b	ENSGT00940000160880	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000158185	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000153556.A.b.b #22	ENSGT00940000153713.B.d	ENSGT00530000064228	ENSGT00420000029848.B	ENSGT00390000011484	ENSGT00510000048608	ENSGT00940000162856	ENSGT00530000064225	ENSGT00940000165308	ENSGT00400000023784	ENSGT00940000161876	ENSGT00390000013163	ENSGT00940000155983.a.a	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b
Narwhal	DUPLICATION
Narwhal	MODERN SPECIES	298	ENSMMNG00015003453	ENSMMNG00015003469	PRELID2 (ENSMMNG00015003496)	GRXCR2 (ENSMMNG00015003518)	ENSMMNG00015003539	SH3RF2 (ENSMMNG00015003555)	PLAC8L1 (ENSMMNG00015003586)	LARS1 (ENSMMNG00015003613)	RBM27 (ENSMMNG00015003667)	POU4F3 (ENSMMNG00015003731)	TCERG1 (ENSMMNG00015003797)	GPR151 (ENSMMNG00015003913)	PPP2R2B (ENSMMNG00015003975)	STK32A (ENSMMNG00015000060)	DPYSL3 (ENSMMNG00015000166)	ENSMMNG00015000321 #22	ENSMMNG00015000335 #22	JAKMIP2 (ENSMMNG00015000470)	SPINK1 (ENSMMNG00015000633)	SCGB3A2 (ENSMMNG00015000655)	C5orf46 (ENSMMNG00015000681)	SPINK14 (ENSMMNG00015000704)	SPINK6 (ENSMMNG00015000740)	ENSMMNG00015000765	SPINK13 (ENSMMNG00015000781)	SPINK7 (ENSMMNG00015000804)	FBXO38 (ENSMMNG00015000846)	HTR4 (ENSMMNG00015000986)	ADRB2 (ENSMMNG00015001090)	SH3TC2 (ENSMMNG00015001111)	ABLIM3 (ENSMMNG00015001180)
Narwhal	MODERN SPECIES	298	ENSMMNG00015003469	PRELID2 (ENSMMNG00015003496)	GRXCR2 (ENSMMNG00015003518)	ENSMMNG00015003539	SH3RF2 (ENSMMNG00015003555)	PLAC8L1 (ENSMMNG00015003586)	LARS1 (ENSMMNG00015003613)	RBM27 (ENSMMNG00015003667)	POU4F3 (ENSMMNG00015003731)	TCERG1 (ENSMMNG00015003797)	GPR151 (ENSMMNG00015003913)	PPP2R2B (ENSMMNG00015003975)	STK32A (ENSMMNG00015000060)	DPYSL3 (ENSMMNG00015000166)	ENSMMNG00015000321 #22	ENSMMNG00015000335 #22	JAKMIP2 (ENSMMNG00015000470)	SPINK1 (ENSMMNG00015000633)	SCGB3A2 (ENSMMNG00015000655)	C5orf46 (ENSMMNG00015000681)	SPINK14 (ENSMMNG00015000704)	SPINK6 (ENSMMNG00015000740)	ENSMMNG00015000765	SPINK13 (ENSMMNG00015000781)	SPINK7 (ENSMMNG00015000804)	FBXO38 (ENSMMNG00015000846)	HTR4 (ENSMMNG00015000986)	ADRB2 (ENSMMNG00015001090)	SH3TC2 (ENSMMNG00015001111)	ABLIM3 (ENSMMNG00015001180)	AFAP1L1 (ENSMMNG00015001296)
Vaquita	MODERN SPECIES	14	KCTD16 (ENSPSNG00000001468)	ENSPSNG00000001457	PRELID2 (ENSPSNG00000001434)	ENSPSNG00000001406	ENSPSNG00000001397	SH3RF2 (ENSPSNG00000001368)	ENSPSNG00000001352	LARS1 (ENSPSNG00000001219)	RBM27 (ENSPSNG00000001102)	POU4F3 (ENSPSNG00000001078)	TCERG1 (ENSPSNG00000000979)	GPR151 (ENSPSNG00000000918)	PPP2R2B (ENSPSNG00000000828)	STK32A (ENSPSNG00000000717)	DPYSL3 (ENSPSNG00000000668)	ENSPSNG00000000632 #22	JAKMIP2 (ENSPSNG00000000558)	SPINK1 (ENSPSNG00000000390)	SCGB3A2 (ENSPSNG00000000357)	C5orf46 (ENSPSNG00000000335)	ENSPSNG00000000317	SPINK6 (ENSPSNG00000000297)	SPINK13 (ENSPSNG00000000253)	SPINK7 (ENSPSNG00000000221)	FBXO38 (ENSPSNG00000000192)	HTR4 (ENSPSNG00000000133)	ADRB2 (ENSPSNG00000019879)	SH3TC2 (ENSPSNG00000019837)	ABLIM3 (ENSPSNG00000019641)	AFAP1L1 (ENSPSNG00000019557)	GRPEL2 (ENSPSNG00000019509)