Euarchontoglires_A ANCESTRAL SPECIES 12 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000154823 Glires ANCESTRAL SPECIES 11 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000154823 Rodentia ANCESTRAL SPECIES 11 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000165238 Rodentia_A ANCESTRAL SPECIES 10 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000165238 Hystricomorpha ANCESTRAL SPECIES 17 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a.c ENSGT00940000165238 Hystricomorpha_a ANCESTRAL SPECIES 16 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a.c ENSGT00940000165238 Guinea pig MODERN SPECIES 30 ENSCPOG00000008901 #7 NSUN5 (ENSCPOG00000023149) #8 TRIM50 (ENSCPOG00000013325) #9 ENSCPOG00000003350 #10 FZD9 (ENSCPOG00000038130) #11 BAZ1B (ENSCPOG00000011829) #12 BCL7B (ENSCPOG00000015110) #13 TBL2 (ENSCPOG00000030307) #14 MLXIPL (ENSCPOG00000010276) #15 VPS37D (ENSCPOG00000036296) #16 DNAJC30 (ENSCPOG00000006476) #17 BUD23 (ENSCPOG00000026365) #18 STX1A (ENSCPOG00000003386) #19 ABHD11 (ENSCPOG00000036499) #20 CLDN3 (ENSCPOG00000008619) #21 CLDN4 (ENSCPOG00000022400) #22 ENSCPOG00000034617 #23 LIMK1 (ENSCPOG00000000745) #24 EIF4H (ENSCPOG00000019301) #25 LAT2 (ENSCPOG00000022644) #26 RFC2 (ENSCPOG00000012351) #27 CLIP2 (ENSCPOG00000002853) #28 VOPP1 (ENSCPOG00000037528) #29 LANCL2 (ENSCPOG00000030899) #30 Hystricomorpha_b ANCESTRAL SPECIES 38 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a.c ENSGT00940000165238 Long-tailed chinchilla MODERN SPECIES 163 ENSCLAG00000006542 #7 NSUN5 (ENSCLAG00000005624) #8 TRIM50 (ENSCLAG00000004544) #9 FKBP6 (ENSCLAG00000006613) #10 FZD9 (ENSCLAG00000017759) #11 BAZ1B (ENSCLAG00000009400) #12 BCL7B (ENSCLAG00000012786) #13 TBL2 (ENSCLAG00000013573) #14 MLXIPL (ENSCLAG00000012704) #15 VPS37D (ENSCLAG00000006521) #16 DNAJC30 (ENSCLAG00000006310) #17 BUD23 (ENSCLAG00000004776) #18 STX1A (ENSCLAG00000005586) #19 ABHD11 (ENSCLAG00000007679) #20 CLDN3 (ENSCLAG00000017844) #21 CLDN4 (ENSCLAG00000017992) #22 METTL27 (ENSCLAG00000005194) ENSCLAG00000012225 LIMK1 (ENSCLAG00000009497) #24 EIF4H (ENSCLAG00000012003) #25 ENSCLAG00000008208 #26 RFC2 (ENSCLAG00000009716) #27 CLIP2 (ENSCLAG00000005174) #28 GTF2IRD1 (ENSCLAG00000007139) GTF2I (ENSCLAG00000004967) NCF1 (ENSCLAG00000012338) ENSCLAG00000009126 RCC1L (ENSCLAG00000006691) CASTOR2 (ENSCLAG00000006146) ENSCLAG00000017618 ENSCLAG00000007862 Degu MODERN SPECIES 76 HIP1 (ENSODEG00000016265) ENSODEG00000015346 #7 NSUN5 (ENSODEG00000015132) #8 TRIM50 (ENSODEG00000015712) #9 FKBP6 (ENSODEG00000016257) #10 FZD9 (ENSODEG00000020544) #11 BAZ1B (ENSODEG00000015361) #12 BCL7B (ENSODEG00000015813) #13 TBL2 (ENSODEG00000016440) #14 MLXIPL (ENSODEG00000015218) #15 ENSODEG00000015421 #16 DNAJC30 (ENSODEG00000015782) #17 BUD23 (ENSODEG00000015372) #18 STX1A (ENSODEG00000015835) #19 CLDN3 (ENSODEG00000020387) #21 CLDN4 (ENSODEG00000020405) #22 METTL27 (ENSODEG00000015241) ENSODEG00000015892 ELN (ENSODEG00000016045) LIMK1 (ENSODEG00000015076) #24 ENSODEG00000015854 #25 ENSODEG00000016042 #26 ENSODEG00000015354 #27 CLIP2 (ENSODEG00000015462) #28 GTF2IRD1 (ENSODEG00000015635) GTF2I (ENSODEG00000015405) NCF1 (ENSODEG00000015696) ENSODEG00000014736 RCC1L (ENSODEG00000014434) CASTOR2 (ENSODEG00000014375) ENSODEG00000015156 Naked mole-rat female MODERN SPECIES ENSHGLG00000050622 ENSHGLG00000016402 ENSHGLG00000018321 #8 TRIM50 (ENSHGLG00000043808) #9 FKBP6 (ENSHGLG00000013613) #10 FZD9 (ENSHGLG00000049075) #11 ENSHGLG00000040182 #13 ENSHGLG00000039082 #14 ENSHGLG00000048032 #15 VPS37D (ENSHGLG00000035647) #16 DNAJC30 (ENSHGLG00000049264) #17 BUD23 (ENSHGLG00000010016) #18 STX1A (ENSHGLG00000010000) #19 ABHD11 (ENSHGLG00000043301) #20 CLDN3 (ENSHGLG00000044396) #21 CLDN4 (ENSHGLG00000046697) #22 ENSHGLG00000049431 LIMK1 (ENSHGLG00000018556) #24 ENSHGLG00000037032 ENSHGLG00000040818 #26 RFC2 (ENSHGLG00000012236) #27 ENSHGLG00000037210 #28 GTF2IRD1 (ENSHGLG00000017547) ENSHGLG00000045511 GTF2I (ENSHGLG00000006657) ENSHGLG00000050966 ENSHGLG00000036828 ENSHGLG00000016041 ENSHGLG00000012588 ENSHGLG00000049448 ENSHGLG00000041566 Sciuridae ANCESTRAL SPECIES 9 ENSGT00940000153253.b.a.g.i #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000167689 Marmotini ANCESTRAL SPECIES 3 ENSGT00940000153253.b.a.g.i #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000167689 ENSGT00940000154823 Marmotini_b ANCESTRAL SPECIES 1 ENSGT00940000153253.b.a.g.i #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000154823 ENSGT00940000156014 Arctic ground squirrel MODERN SPECIES 176 ENSUPAG00010015715 #7 NSUN5 (ENSUPAG00010015725) #8 TRIM50 (ENSUPAG00010015761) #9 FKBP6 (ENSUPAG00010015780) #10 FZD9 (ENSUPAG00010015887) #11 BAZ1B (ENSUPAG00010015894) #12 BCL7B (ENSUPAG00010000037) #13 TBL2 (ENSUPAG00010000107) #14 MLXIPL (ENSUPAG00010000121) #15 VPS37D (ENSUPAG00010000183) #16 DNAJC30 (ENSUPAG00010000197) #17 BUD23 (ENSUPAG00010000219) #18 STX1A (ENSUPAG00010000313) #19 ABHD11 (ENSUPAG00010000333) #20 CLDN3 (ENSUPAG00010000350) #21 CLDN4 (ENSUPAG00010000359) #22 METTL27 (ENSUPAG00010000370) TMEM270 (ENSUPAG00010000473) LIMK1 (ENSUPAG00010000563) #24 EIF4H (ENSUPAG00010000621) #25 ENSUPAG00010000676 #26 RFC2 (ENSUPAG00010000692) #27 CLIP2 (ENSUPAG00010000723) #28 GTF2IRD1 (ENSUPAG00010000788) ENSUPAG00010001832 GTF2I (ENSUPAG00010001864) NCF1 (ENSUPAG00010004896) ENSUPAG00010004921 RCC1L (ENSUPAG00010004931) CASTOR2 (ENSUPAG00010004951) Squirrel MODERN SPECIES 143 ENSSTOG00000015016 #7 NSUN5 (ENSSTOG00000015023) #8 TRIM50 (ENSSTOG00000010973) #9 FKBP6 (ENSSTOG00000010978) #10 FZD9 (ENSSTOG00000024695) #11 BAZ1B (ENSSTOG00000010985) #12 BCL7B (ENSSTOG00000011010) #13 TBL2 (ENSSTOG00000011015) #14 MLXIPL (ENSSTOG00000027367) #15 VPS37D (ENSSTOG00000022076) #16 DNAJC30 (ENSSTOG00000009969) #17 BUD23 (ENSSTOG00000009975) #18 STX1A (ENSSTOG00000009992) #19 ABHD11 (ENSSTOG00000007711) #20 CLDN3 (ENSSTOG00000025193) #21 CLDN4 (ENSSTOG00000020536) #22 METTL27 (ENSSTOG00000021502) TMEM270 (ENSSTOG00000014579) LIMK1 (ENSSTOG00000012798) #24 EIF4H (ENSSTOG00000020777) #25 ENSSTOG00000034812 #26 RFC2 (ENSSTOG00000026992) #27 CLIP2 (ENSSTOG00000020754) #28 GTF2IRD1 (ENSSTOG00000014343) ENSSTOG00000033789 GTF2I (ENSSTOG00000009641) NCF1 (ENSSTOG00000006420) ENSSTOG00000032504 RCC1L (ENSSTOG00000014118) CASTOR2 (ENSSTOG00000020649) ENSSTOG00000031454 Alpin marmot MODERN SPECIES 28 HIP1 (ENSMMMG00000010793) ENSMMMG00000010192 #7 NSUN5 (ENSMMMG00000010167) #8 TRIM50 (ENSMMMG00000010149) #9 FZD9 (ENSMMMG00000010138) #11 BAZ1B (ENSMMMG00000010099) #12 BCL7B (ENSMMMG00000010065) #13 TBL2 (ENSMMMG00000010056) #14 MLXIPL (ENSMMMG00000009229) #15 VPS37D (ENSMMMG00000009219) #16 DNAJC30 (ENSMMMG00000009214) #17 BUD23 (ENSMMMG00000009092) #18 STX1A (ENSMMMG00000009072) #19 ABHD11 (ENSMMMG00000009063) #20 CLDN3 (ENSMMMG00000009059) #21 CLDN4 (ENSMMMG00000009056) #22 METTL27 (ENSMMMG00000008950) TMEM270 (ENSMMMG00000008933) LIMK1 (ENSMMMG00000008892) #24 EIF4H (ENSMMMG00000008869) #25 RFC2 (ENSMMMG00000008843) #27 CLIP2 (ENSMMMG00000008784) #28 GTF2IRD1 (ENSMMMG00000008400) GTF2I (ENSMMMG00000005614) NCF1 (ENSMMMG00000005562) ENSMMMG00000005542 RCC1L (ENSMMMG00000005521) CASTOR2 (ENSMMMG00000005489) ENSMMMG00000005481 AUTS2 (ENSMMMG00000005450) GALNT17 (ENSMMMG00000005419) Eurasian red squirrel MODERN SPECIES 9 NSUN5 (ENSSVLG00005022175) #8 TRIM50 (ENSSVLG00005022215) #9 FKBP6 (ENSSVLG00005022320) #10 FZD9 (ENSSVLG00005022431) #11 BAZ1B (ENSSVLG00005022468) #12 ENSSVLG00005022523 BCL7B (ENSSVLG00005022579) #13 TBL2 (ENSSVLG00005022627) #14 MLXIPL (ENSSVLG00005022686) #15 VPS37D (ENSSVLG00005022774) #16 DNAJC30 (ENSSVLG00005022814) #17 BUD23 (ENSSVLG00005022837) #18 STX1A (ENSSVLG00005022887) #19 ABHD11 (ENSSVLG00005022951) #20 CLDN3 (ENSSVLG00005023122) #21 CLDN4 (ENSSVLG00005023138) #22 METTL27 (ENSSVLG00005023181) TMEM270 (ENSSVLG00005023251) ELN (ENSSVLG00005023350) LIMK1 (ENSSVLG00005023428) #24 EIF4H (ENSSVLG00005023644) #25 ENSSVLG00005023686 #26 RFC2 (ENSSVLG00005023739) #27 CLIP2 (ENSSVLG00005023830) #28 GTF2IRD1 (ENSSVLG00005023920) GTF2I (ENSSVLG00005024130) NCF1 (ENSSVLG00005024194) ENSSVLG00005024253 RCC1L (ENSSVLG00005024314) CASTOR2 (ENSSVLG00005024427) ENSSVLG00005024452 Rodentia_B ANCESTRAL SPECIES 29 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000165238 Kangaroo rat MODERN SPECIES 483 Vps37d (ENSDORG00000025659) #16 Bud23 (ENSDORG00000001092) #18 Stx1a (ENSDORG00000001093) #19 ENSDORG00000026812 #20 Cldn3 (ENSDORG00000026883) #21 Cldn4 (ENSDORG00000007737) #22 ENSDORG00000000546 Tmem270 (ENSDORG00000008287) Eln (ENSDORG00000008812) Limk1 (ENSDORG00000000148) #24 Eif4h (ENSDORG00000008131) #25 Rfc2 (ENSDORG00000012050) #27 Clip2 (ENSDORG00000004807) #28 Gtf2ird1 (ENSDORG00000015995) Gtf2i (ENSDORG00000026097) ENSDORG00000028073 Ncf1 (ENSDORG00000007647) ENSDORG00000029575 Rcc1l (ENSDORG00000004705) Castor2 (ENSDORG00000028235) ENSDORG00000028381 Myomorpha ANCESTRAL SPECIES 31 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000165238 Lesser Egyptian jerboa MODERN SPECIES 130 Clip2 (ENSJJAG00000005724) #28 ENSJJAG00000019351 #27 Limk1 (ENSJJAG00000011905) #24 Eln (ENSJJAG00000013776) Tmem270 (ENSJJAG00000021168) Cldn4 (ENSJJAG00000001702) #22 Cldn3 (ENSJJAG00000002698) #21 Stx1a (ENSJJAG00000011983) #19 Bud23 (ENSJJAG00000022163) #18 ENSJJAG00000024021 Vps37d (ENSJJAG00000015685) #16 Tbl2 (ENSJJAG00000021022) #14 Bcl7b (ENSJJAG00000022923) #13 Baz1b (ENSJJAG00000021158) #12 Trim50 (ENSJJAG00000016334) #9 Nsun5 (ENSJJAG00000012146) #8 Pom121 (ENSJJAG00000018532) #7 ENSJJAG00000014696 Rhbdd2 (ENSJJAG00000015495) Por (ENSJJAG00000016747) Tmem120a (ENSJJAG00000022790) Muroidea ANCESTRAL SPECIES 40 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000165238 Upper Galilee mountains blind mole rat MODERN SPECIES 1433 Nsun5 (ENSNGAG00000015157) #8 Trim50 (ENSNGAG00000017778) #9 Fkbp6 (ENSNGAG00000015304) #10 Fzd9 (ENSNGAG00000006159) #11 Baz1b (ENSNGAG00000018280) #12 Bcl7b (ENSNGAG00000006692) #13 Tbl2 (ENSNGAG00000015069) #14 Mlxipl (ENSNGAG00000017474) #15 ENSNGAG00000001525 Vps37d (ENSNGAG00000018444) #16 Dnajc30 (ENSNGAG00000017300) #17 Bud23 (ENSNGAG00000019433) #18 Stx1a (ENSNGAG00000010219) #19 Abhd11 (ENSNGAG00000007296) #20 Cldn3 (ENSNGAG00000009587) #21 Cldn4 (ENSNGAG00000021470) #22 Mettl27 (ENSNGAG00000021927) Tmem270 (ENSNGAG00000022748) Eln (ENSNGAG00000012495) Muroidea_A ANCESTRAL SPECIES 21 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000163436.n.b ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a Murinae ANCESTRAL SPECIES 20 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000163436.n.b ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a Rat MODERN SPECIES 3 Trim50 (ENSRNOG00000022483) #9 Fkbp6 (ENSRNOG00000001451) #10 Fzd9 (ENSRNOG00000001452) #11 Baz1b (ENSRNOG00000001453) #12 Bcl7b (ENSRNOG00000032705) #13 Tbl2 (ENSRNOG00000046252) #14 AABR07035839.1 (ENSRNOG00000046171) #15 Vps37d (ENSRNOG00000048699) #16 Dnajc30 (ENSRNOG00000031721) #17 Bud23 (ENSRNOG00000033700) #18 Stx1a (ENSRNOG00000029165) #19 Abhd11 (ENSRNOG00000018910) #20 ENSRNOG00000067727 Cldn3 (ENSRNOG00000046007) #21 AABR07072283.2 (ENSRNOG00000059673) Cldn4 (ENSRNOG00000001476) #22 Mettl27 (ENSRNOG00000046700) Tmem270 (ENSRNOG00000001474) Eln (ENSRNOG00000001469) Limk1 (ENSRNOG00000001470) #24 Eif4h (ENSRNOG00000001454) #25 Lat2 (ENSRNOG00000021856) #26 Rfc2 (ENSRNOG00000001457) #27 Ervfrd-1 (ENSRNOG00000050672) Clip2 (ENSRNOG00000021611) #28 Gtf2ird1 (ENSRNOG00000001478) Gtf2i (ENSRNOG00000001479) Ncf1 (ENSRNOG00000001480) Gtf2ird2 (ENSRNOG00000001482) Rcc1l (ENSRNOG00000001483) Castor2 (ENSRNOG00000067286) Mus ANCESTRAL SPECIES 17 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000163436.n.b ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a Mus_A ANCESTRAL SPECIES 6 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000163436.n.b ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a Ryukyu mouse DUPLICATION Ryukyu mouse MODERN SPECIES 14 Hip1 (MGP_CAROLIEiJ_G0027837) Pom121 (MGP_CAROLIEiJ_G0027836) #7 Nsun5 (MGP_CAROLIEiJ_G0027835) #8 Trim50 (MGP_CAROLIEiJ_G0027834) #9 Fkbp6 (MGP_CAROLIEiJ_G0027833) #10 Fzd9 (MGP_CAROLIEiJ_G0027832) #11 Baz1b (MGP_CAROLIEiJ_G0027831) #12 Bcl7b (MGP_CAROLIEiJ_G0027830) #13 MGP_CAROLIEiJ_G0027828 #15 Vps37d (MGP_CAROLIEiJ_G0027827) #16 Dnajc30 (MGP_CAROLIEiJ_G0027826) #17 Bud23 (MGP_CAROLIEiJ_G0027825) #18 Stx1a (MGP_CAROLIEiJ_G0027824) #19 Abhd11 (MGP_CAROLIEiJ_G0027823) #20 Cldn3 (MGP_CAROLIEiJ_G0027822) #21 Cldn4 (MGP_CAROLIEiJ_G0027821) #22 Cldn13 (MGP_CAROLIEiJ_G0027820) #22 Tmem270 (MGP_CAROLIEiJ_G0027819) Eln (MGP_CAROLIEiJ_G0027818) Limk1 (MGP_CAROLIEiJ_G0027817) #24 Eif4h (MGP_CAROLIEiJ_G0027816) #25 Lat2 (MGP_CAROLIEiJ_G0027815) #26 Rfc2 (MGP_CAROLIEiJ_G0027814) #27 Syna (MGP_CAROLIEiJ_G0027813) Clip2 (MGP_CAROLIEiJ_G0027812) #28 Gtf2ird1 (MGP_CAROLIEiJ_G0027811) Gtf2i (MGP_CAROLIEiJ_G0027810) Ncf1 (MGP_CAROLIEiJ_G0027809) Gtf2ird2 (MGP_CAROLIEiJ_G0027808) Rcc1l (MGP_CAROLIEiJ_G0027807) Castor2 (MGP_CAROLIEiJ_G0027806) Ryukyu mouse MODERN SPECIES 14 Pom121 (MGP_CAROLIEiJ_G0027836) #7 Nsun5 (MGP_CAROLIEiJ_G0027835) #8 Trim50 (MGP_CAROLIEiJ_G0027834) #9 Fkbp6 (MGP_CAROLIEiJ_G0027833) #10 Fzd9 (MGP_CAROLIEiJ_G0027832) #11 Baz1b (MGP_CAROLIEiJ_G0027831) #12 Bcl7b (MGP_CAROLIEiJ_G0027830) #13 MGP_CAROLIEiJ_G0027828 #15 Vps37d (MGP_CAROLIEiJ_G0027827) #16 Dnajc30 (MGP_CAROLIEiJ_G0027826) #17 Bud23 (MGP_CAROLIEiJ_G0027825) #18 Stx1a (MGP_CAROLIEiJ_G0027824) #19 Abhd11 (MGP_CAROLIEiJ_G0027823) #20 Cldn3 (MGP_CAROLIEiJ_G0027822) #21 Cldn4 (MGP_CAROLIEiJ_G0027821) #22 Cldn13 (MGP_CAROLIEiJ_G0027820) #22 Tmem270 (MGP_CAROLIEiJ_G0027819) Eln (MGP_CAROLIEiJ_G0027818) Limk1 (MGP_CAROLIEiJ_G0027817) #24 Eif4h (MGP_CAROLIEiJ_G0027816) #25 Lat2 (MGP_CAROLIEiJ_G0027815) #26 Rfc2 (MGP_CAROLIEiJ_G0027814) #27 Syna (MGP_CAROLIEiJ_G0027813) Clip2 (MGP_CAROLIEiJ_G0027812) #28 Gtf2ird1 (MGP_CAROLIEiJ_G0027811) Gtf2i (MGP_CAROLIEiJ_G0027810) Ncf1 (MGP_CAROLIEiJ_G0027809) Gtf2ird2 (MGP_CAROLIEiJ_G0027808) Rcc1l (MGP_CAROLIEiJ_G0027807) Castor2 (MGP_CAROLIEiJ_G0027806) Auts2 (MGP_CAROLIEiJ_G0027805) Mus_B ANCESTRAL SPECIES 4 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000163436.n.b ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a Mus_C ANCESTRAL SPECIES 4 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000163436.n.b ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2252 Cldn3 (ENSMSIG00000009656) #21 Cldn4 (ENSMSIG00000009659) #22 Mettl27 (ENSMSIG00000009668) Cldn13 (ENSMSIG00000009719) #22 Tmem270 (ENSMSIG00000009727) Steppe mouse MODERN SPECIES 2252 Cldn3 (ENSMSIG00000009656) #21 Cldn4 (ENSMSIG00000009659) #22 Mettl27 (ENSMSIG00000009668) Cldn13 (ENSMSIG00000009719) #22 Tmem270 (ENSMSIG00000009727) spretus DUPLICATION spretus MODERN SPECIES 14 Pom121 (MGP_SPRETEiJ_G0028835) #7 Nsun5 (MGP_SPRETEiJ_G0028834) #8 Trim50 (MGP_SPRETEiJ_G0028833) #9 Fkbp6 (MGP_SPRETEiJ_G0028832) #10 Fzd9 (MGP_SPRETEiJ_G0028831) #11 Baz1b (MGP_SPRETEiJ_G0028830) #12 Bcl7b (MGP_SPRETEiJ_G0028829) #13 Tbl2 (MGP_SPRETEiJ_G0028828) #14 Mlxipl (MGP_SPRETEiJ_G0028827) #15 Vps37d (MGP_SPRETEiJ_G0028826) #16 Dnajc30 (MGP_SPRETEiJ_G0028825) #17 Bud23 (MGP_SPRETEiJ_G0028824) #18 Stx1a (MGP_SPRETEiJ_G0028823) #19 Abhd11 (MGP_SPRETEiJ_G0028822) #20 Cldn3 (MGP_SPRETEiJ_G0028821) #21 Cldn4 (MGP_SPRETEiJ_G0028820) #22 Mettl27 (MGP_SPRETEiJ_G0028819) Cldn13 (MGP_SPRETEiJ_G0028818) #22 Tmem270 (MGP_SPRETEiJ_G0028817) Eln (MGP_SPRETEiJ_G0028816) Limk1 (MGP_SPRETEiJ_G0028815) #24 Eif4h (MGP_SPRETEiJ_G0028814) #25 Lat2 (MGP_SPRETEiJ_G0028813) #26 Rfc2 (MGP_SPRETEiJ_G0028812) #27 Syna (MGP_SPRETEiJ_G0028811) Clip2 (MGP_SPRETEiJ_G0028810) #28 Gtf2ird1 (MGP_SPRETEiJ_G0028809) Gtf2i (MGP_SPRETEiJ_G0028808) Ncf1 (MGP_SPRETEiJ_G0028807) Gtf2ird2 (MGP_SPRETEiJ_G0028806) Rcc1l (MGP_SPRETEiJ_G0028805) spretus MODERN SPECIES 14 Trim50 (MGP_SPRETEiJ_G0028833) #9 Fkbp6 (MGP_SPRETEiJ_G0028832) #10 Fzd9 (MGP_SPRETEiJ_G0028831) #11 Baz1b (MGP_SPRETEiJ_G0028830) #12 Bcl7b (MGP_SPRETEiJ_G0028829) #13 Tbl2 (MGP_SPRETEiJ_G0028828) #14 Mlxipl (MGP_SPRETEiJ_G0028827) #15 Vps37d (MGP_SPRETEiJ_G0028826) #16 Dnajc30 (MGP_SPRETEiJ_G0028825) #17 Bud23 (MGP_SPRETEiJ_G0028824) #18 Stx1a (MGP_SPRETEiJ_G0028823) #19 Abhd11 (MGP_SPRETEiJ_G0028822) #20 Cldn3 (MGP_SPRETEiJ_G0028821) #21 Cldn4 (MGP_SPRETEiJ_G0028820) #22 Mettl27 (MGP_SPRETEiJ_G0028819) Cldn13 (MGP_SPRETEiJ_G0028818) #22 Tmem270 (MGP_SPRETEiJ_G0028817) Eln (MGP_SPRETEiJ_G0028816) Limk1 (MGP_SPRETEiJ_G0028815) #24 Eif4h (MGP_SPRETEiJ_G0028814) #25 Lat2 (MGP_SPRETEiJ_G0028813) #26 Rfc2 (MGP_SPRETEiJ_G0028812) #27 Syna (MGP_SPRETEiJ_G0028811) Clip2 (MGP_SPRETEiJ_G0028810) #28 Gtf2ird1 (MGP_SPRETEiJ_G0028809) Gtf2i (MGP_SPRETEiJ_G0028808) Ncf1 (MGP_SPRETEiJ_G0028807) Gtf2ird2 (MGP_SPRETEiJ_G0028806) Rcc1l (MGP_SPRETEiJ_G0028805) Castor2 (MGP_SPRETEiJ_G0028804) Auts2 (MGP_SPRETEiJ_G0028803) Mouse DUPLICATION Mouse MODERN SPECIES 14 Pom121 (ENSMUSG00000053293) #7 Nsun5 (ENSMUSG00000000916) #8 Trim50 (ENSMUSG00000053388) #9 Fkbp6 (ENSMUSG00000040013) #10 Fzd9 (ENSMUSG00000049551) #11 Baz1b (ENSMUSG00000002748) #12 Bcl7b (ENSMUSG00000029681) #13 Tbl2 (ENSMUSG00000005374) #14 Mlxipl (ENSMUSG00000005373) #15 Vps37d (ENSMUSG00000043614) #16 Dnajc30 (ENSMUSG00000061118) #17 Bud23 (ENSMUSG00000005378) #18 Stx1a (ENSMUSG00000007207) #19 Abhd11 (ENSMUSG00000040532) #20 Cldn3 (ENSMUSG00000070473) #21 Cldn4 (ENSMUSG00000047501) #22 Mettl27 (ENSMUSG00000040557) Cldn13 (ENSMUSG00000008843) #22 Tmem270 (ENSMUSG00000040576) Eln (ENSMUSG00000029675) Limk1 (ENSMUSG00000029674) #24 Eif4h (ENSMUSG00000040731) #25 Lat2 (ENSMUSG00000040751) #26 Rfc2 (ENSMUSG00000023104) #27 Syna (ENSMUSG00000085957) Clip2 (ENSMUSG00000063146) #28 Gtf2ird1 (ENSMUSG00000023079) Gtf2i (ENSMUSG00000060261) Ncf1 (ENSMUSG00000015950) Gtf2ird2 (ENSMUSG00000015942) Rcc1l (ENSMUSG00000061979) Mouse MODERN SPECIES 14 Trim50 (ENSMUSG00000053388) #9 Fkbp6 (ENSMUSG00000040013) #10 Fzd9 (ENSMUSG00000049551) #11 Baz1b (ENSMUSG00000002748) #12 Bcl7b (ENSMUSG00000029681) #13 Tbl2 (ENSMUSG00000005374) #14 Mlxipl (ENSMUSG00000005373) #15 Vps37d (ENSMUSG00000043614) #16 Dnajc30 (ENSMUSG00000061118) #17 Bud23 (ENSMUSG00000005378) #18 Stx1a (ENSMUSG00000007207) #19 Abhd11 (ENSMUSG00000040532) #20 Cldn3 (ENSMUSG00000070473) #21 Cldn4 (ENSMUSG00000047501) #22 Mettl27 (ENSMUSG00000040557) Cldn13 (ENSMUSG00000008843) #22 Tmem270 (ENSMUSG00000040576) Eln (ENSMUSG00000029675) Limk1 (ENSMUSG00000029674) #24 Eif4h (ENSMUSG00000040731) #25 Lat2 (ENSMUSG00000040751) #26 Rfc2 (ENSMUSG00000023104) #27 Syna (ENSMUSG00000085957) Clip2 (ENSMUSG00000063146) #28 Gtf2ird1 (ENSMUSG00000023079) Gtf2i (ENSMUSG00000060261) Ncf1 (ENSMUSG00000015950) Gtf2ird2 (ENSMUSG00000015942) Rcc1l (ENSMUSG00000061979) Castor2 (ENSMUSG00000015944) Auts2 (ENSMUSG00000029673) Shrew mouse DUPLICATION Shrew mouse MODERN SPECIES 15 Pom121 (MGP_PahariEiJ_G0024416) #7 Nsun5 (MGP_PahariEiJ_G0024415) #8 Trim50 (MGP_PahariEiJ_G0024414) #9 Fkbp6 (MGP_PahariEiJ_G0024413) #10 Fzd9 (MGP_PahariEiJ_G0024412) #11 Baz1b (MGP_PahariEiJ_G0024411) #12 Bcl7b (MGP_PahariEiJ_G0024410) #13 Tbl2 (MGP_PahariEiJ_G0024409) #14 Mlxipl (MGP_PahariEiJ_G0024408) #15 Vps37d (MGP_PahariEiJ_G0024407) #16 Dnajc30 (MGP_PahariEiJ_G0024406) #17 Bud23 (MGP_PahariEiJ_G0024405) #18 Stx1a (MGP_PahariEiJ_G0024404) #19 Abhd11 (MGP_PahariEiJ_G0024403) #20 Cldn3 (MGP_PahariEiJ_G0024402) #21 Cldn4 (MGP_PahariEiJ_G0024401) #22 Mettl27 (MGP_PahariEiJ_G0024400) Mrps17 (MGP_PahariEiJ_G0024399) Nipsnap2 (MGP_PahariEiJ_G0024398) Psph (MGP_PahariEiJ_G0024397) Sumf2 (MGP_PahariEiJ_G0024396) MGP_PahariEiJ_G0024395 Phkg1 (MGP_PahariEiJ_G0024394) Zbed5 (MGP_PahariEiJ_G0024393) Nupr1l (MGP_PahariEiJ_G0024392) Gusb (MGP_PahariEiJ_G0024391) Asl (MGP_PahariEiJ_G0024390) Crcp (MGP_PahariEiJ_G0024389) Tpst1 (MGP_PahariEiJ_G0024388) Kctd7 (MGP_PahariEiJ_G0024387) Rabgef1 (MGP_PahariEiJ_G0024386) Shrew mouse MODERN SPECIES 15 Tmem132c (MGP_PahariEiJ_G0024350) Slc15a4 (MGP_PahariEiJ_G0024351) Glt1d1 (MGP_PahariEiJ_G0024352) Tmem132d (MGP_PahariEiJ_G0024353) Fzd10 (MGP_PahariEiJ_G0024354) Piwil1 (MGP_PahariEiJ_G0024355) Rimbp2 (MGP_PahariEiJ_G0024356) Stx2 (MGP_PahariEiJ_G0024357) ##19 Ran (MGP_PahariEiJ_G0024358) Adgrd1 (MGP_PahariEiJ_G0024359) Sfswap (MGP_PahariEiJ_G0024360) Mmp17 (MGP_PahariEiJ_G0024361) Zfp11 (MGP_PahariEiJ_G0024362) Septin14 (MGP_PahariEiJ_G0024363) MGP_PahariEiJ_G0024364 MGP_PahariEiJ_G0024365 #22 Eln (MGP_PahariEiJ_G0024366) Limk1 (MGP_PahariEiJ_G0024367) #24 Eif4h (MGP_PahariEiJ_G0024368) #25 Lat2 (MGP_PahariEiJ_G0024369) #26 Rfc2 (MGP_PahariEiJ_G0024370) #27 Syna (MGP_PahariEiJ_G0024371) Clip2 (MGP_PahariEiJ_G0024372) #28 Gtf2ird1 (MGP_PahariEiJ_G0024373) Gtf2i (MGP_PahariEiJ_G0024374) Ncf1 (MGP_PahariEiJ_G0024375) Gtf2ird2 (MGP_PahariEiJ_G0024376) Rcc1l (MGP_PahariEiJ_G0024377) Castor2 (MGP_PahariEiJ_G0024378) MGP_PahariEiJ_G0024379 Galnt17 (MGP_PahariEiJ_G0024380) Cricetidae ANCESTRAL SPECIES 20 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000163436.n.b ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a Cricetinae ANCESTRAL SPECIES 27 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000163436.n.b ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 715 Ccl24 (ENSMAUG00000006711) Hip1 (ENSMAUG00000008357) Pom121 (ENSMAUG00000016562) #7 Nsun5 (ENSMAUG00000019013) #8 Trim50 (ENSMAUG00000007761) #9 Fzd9 (ENSMAUG00000009265) #11 Bcl7b (ENSMAUG00000016763) #13 Tbl2 (ENSMAUG00000013229) #14 Mlxipl (ENSMAUG00000019597) #15 Vps37d (ENSMAUG00000010518) #16 Dnajc30 (ENSMAUG00000013082) #17 ENSMAUG00000008632 #18 Stx1a (ENSMAUG00000022263) #19 Abhd11 (ENSMAUG00000019879) #20 Cldn3 (ENSMAUG00000008536) #21 Cldn4 (ENSMAUG00000008376) #22 ENSMAUG00000011735 Cldn13 (ENSMAUG00000010332) #22 Tmem270 (ENSMAUG00000013942) Eln (ENSMAUG00000017767) Limk1 (ENSMAUG00000013822) #24 Eif4h (ENSMAUG00000000548) #25 Clip2 (ENSMAUG00000019532) #28 ENSMAUG00000008502 ENSMAUG00000004428 ENSMAUG00000013915 Gtf2ird2 (ENSMAUG00000000584) Rcc1l (ENSMAUG00000014220) Castor2 (ENSMAUG00000008802) ENSMAUG00000008331 ENSMAUG00000020804 Golden Hamster MODERN SPECIES 715 Pom121 (ENSMAUG00000016562) #7 Nsun5 (ENSMAUG00000019013) #8 Trim50 (ENSMAUG00000007761) #9 Fzd9 (ENSMAUG00000009265) #11 Bcl7b (ENSMAUG00000016763) #13 Tbl2 (ENSMAUG00000013229) #14 Mlxipl (ENSMAUG00000019597) #15 Vps37d (ENSMAUG00000010518) #16 Dnajc30 (ENSMAUG00000013082) #17 ENSMAUG00000008632 #18 Stx1a (ENSMAUG00000022263) #19 Abhd11 (ENSMAUG00000019879) #20 Cldn3 (ENSMAUG00000008536) #21 Cldn4 (ENSMAUG00000008376) #22 ENSMAUG00000011735 Cldn13 (ENSMAUG00000010332) #22 Tmem270 (ENSMAUG00000013942) Eln (ENSMAUG00000017767) Limk1 (ENSMAUG00000013822) #24 Eif4h (ENSMAUG00000000548) #25 Clip2 (ENSMAUG00000019532) #28 ENSMAUG00000008502 ENSMAUG00000004428 ENSMAUG00000013915 Gtf2ird2 (ENSMAUG00000000584) Rcc1l (ENSMAUG00000014220) Castor2 (ENSMAUG00000008802) ENSMAUG00000008331 ENSMAUG00000020804 ENSMAUG00000009035 Galnt17 (ENSMAUG00000012645) Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 202 Pom121 (ENSCGRG00001021017) #7 Nsun5 (ENSCGRG00001006270) #8 Trim50 (ENSCGRG00001000500) #9 Fkbp6 (ENSCGRG00001021414) #10 Fzd9 (ENSCGRG00001008395) #11 Baz1b (ENSCGRG00001000343) #12 Bcl7b (ENSCGRG00001003854) #13 Tbl2 (ENSCGRG00001008911) #14 Mlxipl (ENSCGRG00001019096) #15 Vps37d (ENSCGRG00001014548) #16 Dnajc30 (ENSCGRG00001009358) #17 Bud23 (ENSCGRG00001016132) #18 Stx1a (ENSCGRG00001001855) #19 Abhd11 (ENSCGRG00001021891) #20 Cldn3 (ENSCGRG00001004756) #21 Cldn4 (ENSCGRG00001001042) #22 Mettl27 (ENSCGRG00001000493) Cldn13 (ENSCGRG00001002544) #22 Tmem270 (ENSCGRG00001016540) Eln (ENSCGRG00001021282) Limk1 (ENSCGRG00001023083) #24 ENSCGRG00001018549 Eif4h (ENSCGRG00001000916) #25 Lat2 (ENSCGRG00001015344) #26 Rfc2 (ENSCGRG00001005142) #27 Syna (ENSCGRG00001002407) Clip2 (ENSCGRG00001013708) #28 Gtf2ird1 (ENSCGRG00001010887) Gtf2i (ENSCGRG00001015705) Ncf1 (ENSCGRG00001022040) Gtf2ird2 (ENSCGRG00001017104) Chinese hamster chok1gshd MODERN SPECIES 202 Trim50 (ENSCGRG00001000500) #9 Fkbp6 (ENSCGRG00001021414) #10 Fzd9 (ENSCGRG00001008395) #11 Baz1b (ENSCGRG00001000343) #12 Bcl7b (ENSCGRG00001003854) #13 Tbl2 (ENSCGRG00001008911) #14 Mlxipl (ENSCGRG00001019096) #15 Vps37d (ENSCGRG00001014548) #16 Dnajc30 (ENSCGRG00001009358) #17 Bud23 (ENSCGRG00001016132) #18 Stx1a (ENSCGRG00001001855) #19 Abhd11 (ENSCGRG00001021891) #20 Cldn3 (ENSCGRG00001004756) #21 Cldn4 (ENSCGRG00001001042) #22 Mettl27 (ENSCGRG00001000493) Cldn13 (ENSCGRG00001002544) #22 Tmem270 (ENSCGRG00001016540) Eln (ENSCGRG00001021282) Limk1 (ENSCGRG00001023083) #24 ENSCGRG00001018549 Eif4h (ENSCGRG00001000916) #25 Lat2 (ENSCGRG00001015344) #26 Rfc2 (ENSCGRG00001005142) #27 Syna (ENSCGRG00001002407) Clip2 (ENSCGRG00001013708) #28 Gtf2ird1 (ENSCGRG00001010887) Gtf2i (ENSCGRG00001015705) Ncf1 (ENSCGRG00001022040) Gtf2ird2 (ENSCGRG00001017104) Rcc1l (ENSCGRG00001019474) Castor2 (ENSCGRG00001003009) Cricetidae_B ANCESTRAL SPECIES 19 ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000162095 #21 ENSGT00940000154762.a.b #22 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000163436.n.b ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a Prairie vole MODERN SPECIES 7 Hip1 (ENSMOCG00000012389) Pom121 (ENSMOCG00000009614) #7 Nsun5 (ENSMOCG00000021028) #8 Trim50 (ENSMOCG00000001798) #9 Fkbp6 (ENSMOCG00000017785) #10 Baz1b (ENSMOCG00000001392) #12 Bcl7b (ENSMOCG00000016410) #13 Tbl2 (ENSMOCG00000004974) #14 Mlxipl (ENSMOCG00000016840) #15 Vps37d (ENSMOCG00000021802) #16 Dnajc30 (ENSMOCG00000003535) #17 Bud23 (ENSMOCG00000020978) #18 Stx1a (ENSMOCG00000018912) #19 ENSMOCG00000021964 #20 Cldn3 (ENSMOCG00000007854) #21 Cldn4 (ENSMOCG00000007383) #22 Mettl27 (ENSMOCG00000008990) Tmem270 (ENSMOCG00000016586) Eln (ENSMOCG00000018526) Limk1 (ENSMOCG00000016343) #24 Eif4h (ENSMOCG00000003802) #25 Lat2 (ENSMOCG00000018944) #26 Rfc2 (ENSMOCG00000015610) #27 Clip2 (ENSMOCG00000007890) #28 Gtf2ird1 (ENSMOCG00000011895) Gtf2i (ENSMOCG00000018886) Ncf1 (ENSMOCG00000019150) Gtf2ird2 (ENSMOCG00000022673) Rcc1l (ENSMOCG00000018137) Castor2 (ENSMOCG00000004588) ENSMOCG00000007804 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 15 Pom121 (ENSPEMG00000007281) #7 Nsun5 (ENSPEMG00000010466) #8 Trim50 (ENSPEMG00000010927) #9 Fkbp6 (ENSPEMG00000013089) #10 Fzd9 (ENSPEMG00000015364) #11 Baz1b (ENSPEMG00000000069) #12 Bcl7b (ENSPEMG00000008749) #13 Tbl2 (ENSPEMG00000028566) #14 Mlxipl (ENSPEMG00000015757) #15 Vps37d (ENSPEMG00000020797) #16 Dnajc30 (ENSPEMG00000013658) #17 Bud23 (ENSPEMG00000000228) #18 Stx1a (ENSPEMG00000007082) #19 Abhd11 (ENSPEMG00000029413) #20 Cldn3 (ENSPEMG00000013396) #21 Cldn4 (ENSPEMG00000013607) #22 Mettl27 (ENSPEMG00000015812) ENSPEMG00000025259 #22 ENSPEMG00000027908 #22 ENSPEMG00000000427 #22 Tmem270 (ENSPEMG00000001860) Eln (ENSPEMG00000017632) Limk1 (ENSPEMG00000006190) #24 ENSPEMG00000027970 Eif4h (ENSPEMG00000018422) #25 Lat2 (ENSPEMG00000004565) #26 Rfc2 (ENSPEMG00000008890) #27 Syna (ENSPEMG00000009804) Clip2 (ENSPEMG00000014611) #28 Gtf2ird1 (ENSPEMG00000013955) Gtf2i (ENSPEMG00000011537) Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 15 Fkbp6 (ENSPEMG00000013089) #10 Fzd9 (ENSPEMG00000015364) #11 Baz1b (ENSPEMG00000000069) #12 Bcl7b (ENSPEMG00000008749) #13 Tbl2 (ENSPEMG00000028566) #14 Mlxipl (ENSPEMG00000015757) #15 Vps37d (ENSPEMG00000020797) #16 Dnajc30 (ENSPEMG00000013658) #17 Bud23 (ENSPEMG00000000228) #18 Stx1a (ENSPEMG00000007082) #19 Abhd11 (ENSPEMG00000029413) #20 Cldn3 (ENSPEMG00000013396) #21 Cldn4 (ENSPEMG00000013607) #22 Mettl27 (ENSPEMG00000015812) ENSPEMG00000025259 #22 ENSPEMG00000027908 #22 ENSPEMG00000000427 #22 Tmem270 (ENSPEMG00000001860) Eln (ENSPEMG00000017632) Limk1 (ENSPEMG00000006190) #24 ENSPEMG00000027970 Eif4h (ENSPEMG00000018422) #25 Lat2 (ENSPEMG00000004565) #26 Rfc2 (ENSPEMG00000008890) #27 Syna (ENSPEMG00000009804) Clip2 (ENSPEMG00000014611) #28 Gtf2ird1 (ENSPEMG00000013955) Gtf2i (ENSPEMG00000011537) Ncf1 (ENSPEMG00000001024) Gtf2ird2 (ENSPEMG00000030871) ENSPEMG00000026235 Northern American deer mouse MODERN SPECIES 15 Trim50 (ENSPEMG00000010927) #9 Fkbp6 (ENSPEMG00000013089) #10 Fzd9 (ENSPEMG00000015364) #11 Baz1b (ENSPEMG00000000069) #12 Bcl7b (ENSPEMG00000008749) #13 Tbl2 (ENSPEMG00000028566) #14 Mlxipl (ENSPEMG00000015757) #15 Vps37d (ENSPEMG00000020797) #16 Dnajc30 (ENSPEMG00000013658) #17 Bud23 (ENSPEMG00000000228) #18 Stx1a (ENSPEMG00000007082) #19 Abhd11 (ENSPEMG00000029413) #20 Cldn3 (ENSPEMG00000013396) #21 Cldn4 (ENSPEMG00000013607) #22 Mettl27 (ENSPEMG00000015812) ENSPEMG00000025259 #22 ENSPEMG00000027908 #22 ENSPEMG00000000427 #22 Tmem270 (ENSPEMG00000001860) Eln (ENSPEMG00000017632) Limk1 (ENSPEMG00000006190) #24 ENSPEMG00000027970 Eif4h (ENSPEMG00000018422) #25 Lat2 (ENSPEMG00000004565) #26 Rfc2 (ENSPEMG00000008890) #27 Syna (ENSPEMG00000009804) Clip2 (ENSPEMG00000014611) #28 Gtf2ird1 (ENSPEMG00000013955) Gtf2i (ENSPEMG00000011537) Ncf1 (ENSPEMG00000001024) Gtf2ird2 (ENSPEMG00000030871) Northern American deer mouse MODERN SPECIES 15 Fzd9 (ENSPEMG00000015364) #11 Baz1b (ENSPEMG00000000069) #12 Bcl7b (ENSPEMG00000008749) #13 Tbl2 (ENSPEMG00000028566) #14 Mlxipl (ENSPEMG00000015757) #15 Vps37d (ENSPEMG00000020797) #16 Dnajc30 (ENSPEMG00000013658) #17 Bud23 (ENSPEMG00000000228) #18 Stx1a (ENSPEMG00000007082) #19 Abhd11 (ENSPEMG00000029413) #20 Cldn3 (ENSPEMG00000013396) #21 Cldn4 (ENSPEMG00000013607) #22 Mettl27 (ENSPEMG00000015812) ENSPEMG00000025259 #22 ENSPEMG00000027908 #22 ENSPEMG00000000427 #22 Tmem270 (ENSPEMG00000001860) Eln (ENSPEMG00000017632) Limk1 (ENSPEMG00000006190) #24 ENSPEMG00000027970 Eif4h (ENSPEMG00000018422) #25 Lat2 (ENSPEMG00000004565) #26 Rfc2 (ENSPEMG00000008890) #27 Syna (ENSPEMG00000009804) Clip2 (ENSPEMG00000014611) #28 Gtf2ird1 (ENSPEMG00000013955) Gtf2i (ENSPEMG00000011537) Ncf1 (ENSPEMG00000001024) Gtf2ird2 (ENSPEMG00000030871) ENSPEMG00000026235 Rcc1l (ENSPEMG00000015254) Lagomorpha ANCESTRAL SPECIES 89 ENSGT00940000153594.d ENSGT00940000153253.b.a.g #7 ENSGT00940000155974 #8 ENSGT00940000161467 #9 ENSGT00940000158514 #10 ENSGT00940000161226 #11 ENSGT00940000156831 #12 ENSGT00390000002172.A.a #13 ENSGT00390000013836 #14 ENSGT00940000159210 #15 ENSGT00950000183012.B.a #16 ENSGT00510000048685 #17 ENSGT00390000014737 #18 ENSGT01030000234627.a.a.c #19 ENSGT00390000015880 #20 ENSGT00940000154762.a.b #22 ENSGT00940000162095 #21 ENSGT00530000063975 ENSGT00390000009243 ENSGT00730000111510 ENSGT00940000156345 #24 ENSGT00940000155414 #25 ENSGT00390000006821 #26 ENSGT00550000075050 #27 ENSGT00940000159426 #28 ENSGT00940000159414 ENSGT00940000160349 ENSGT00940000160014 ENSGT00940000162266 ENSGT00940000157317 ENSGT00390000006208.a Rabbit MODERN SPECIES 498 ENSOCUG00000024475 HIP1 (ENSOCUG00000002760) ENSOCUG00000013328 #7 ENSOCUG00000013325 #8 TRIM50 (ENSOCUG00000012196) #9 ENSOCUG00000026157 #10 FZD9 (ENSOCUG00000011195) #11 BAZ1B (ENSOCUG00000011202) #12 BCL7B (ENSOCUG00000001782) #13 TBL2 (ENSOCUG00000001783) #14 ENSOCUG00000004554 #15 DNAJC30 (ENSOCUG00000017294) #17 BUD23 (ENSOCUG00000017297) #18 STX1A (ENSOCUG00000017306) #19 ABHD11 (ENSOCUG00000011326) #20 CLDN4 (ENSOCUG00000010358) #22 ENSOCUG00000030473 #21 METTL27 (ENSOCUG00000039017) ENSOCUG00000005132 LIMK1 (ENSOCUG00000025224) #24 ENSOCUG00000031506 EIF4H (ENSOCUG00000017685) #25 RFC2 (ENSOCUG00000022152) #27 CLIP2 (ENSOCUG00000017663) #28 GTF2IRD1 (ENSOCUG00000026916) GTF2I (ENSOCUG00000002063) ENSOCUG00000021213 ENSOCUG00000022131 RCC1L (ENSOCUG00000001170) CASTOR2 (ENSOCUG00000011366) Tree shrew MODERN SPECIES 8470 CLDN4 (ENSTBEG00000002458) #22 METTL27 (ENSTBEG00000001786)