Perciformes	ANCESTRAL SPECIES	16	ENSGT00940000161347.a.a.d #9	ENSGT00940000161347.a.b #10	ENSGT00940000154422.d #11	ENSGT00940000155770.b.b #12	ENSGT00940000170274	ENSGT00390000013415.b #13	ENSGT00940000155227.a #14	ENSGT00390000018729.a.f	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #31	ENSGT00940000156880.c.a	ENSGT00390000013040	ENSGT00940000162230	ENSGT00940000162727.a.b	ENSGT00950000183190.a.b.b	ENSGT00390000005742.x	ENSGT00390000004067	ENSGT00390000006287
Cottioidei	ANCESTRAL SPECIES	18	ENSGT00940000153434.c.b #8	ENSGT00940000161347.a.a.d #9	ENSGT00940000161347.a.b #10	ENSGT00940000154422.d #11	ENSGT00940000155770.b.b #12	ENSGT00390000013415.b #13	ENSGT00940000155227.a #14	ENSGT00390000018729.a.f	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #31	ENSGT00940000156880.c.a	ENSGT00940000163466	ENSGT00950000183190.a.b.b	ENSGT00390000005742.x	ENSGT00390000004067	ENSGT00390000006287	ENSGT00940000154043.A.j.b	ENSGT00390000008220
Lumpfish	MODERN SPECIES	3	ntrk2b (ENSCLMG00005022322) #7	hnrpkl (ENSCLMG00005022318) #8	ENSCLMG00005022316 #9	gna14 (ENSCLMG00005022315) #10	prune2 (ENSCLMG00005022314) #11	ENSCLMG00005022313 #12	zgc:73226 (ENSCLMG00005022312) #13	thbs4b (ENSCLMG00005020990) #14	zgc:122979 (ENSCLMG00005020907) #15	hwa (ENSCLMG00005020905) #16	atp5fa1 (ENSCLMG00005020748) #17	zgc:77838 (ENSCLMG00005020738) #18	RNF165 (ENSCLMG00005020736) #19	LOXHD1 (ENSCLMG00005020728) #20	st8sia5 (ENSCLMG00005020716) #21	rpl37 (ENSCLMG00005020708) #22	PTGS1 (ENSCLMG00005019625) #23	pdcl (ENSCLMG00005019619) #24	rpl28 (ENSCLMG00005019618) #25	ENSCLMG00005019617 #26	ENSCLMG00005019139 #27	notch1a (ENSCLMG00005018745) #28	ENSCLMG00005018730 #29	ENSCLMG00005018729 #30	ENSCLMG00005018727 #31	srek1 (ENSCLMG00005018725) #32	ankra2 (ENSCLMG00005018718) #33	btf3 (ENSCLMG00005018714) #34	foxd1 (ENSCLMG00005018713) #35	fcho2 (ENSCLMG00005017607) #36	TNPO1 (ENSCLMG00005017598) #37
Stickleback	MODERN SPECIES	13	hnrpkl (ENSGACG00000016211) #8	ENSGACG00000016186 #9	ENSGACG00000016180	prune2 (ENSGACG00000016173) #11	ENSGACG00000016171 #12	ENSGACG00000016170	zgc:73226 (ENSGACG00000016169) #13	thbs4b (ENSGACG00000016162) #14	ENSGACG00000016160	zgc:122979 (ENSGACG00000016157) #15	atp5fa1 (ENSGACG00000016142) #17	zgc:77838 (ENSGACG00000016140) #18	RNF165 (ENSGACG00000016138) #19	LOXHD1 (ENSGACG00000016133) #20	st8sia5 (ENSGACG00000016126) #21	rpl37 (ENSGACG00000016123) #22	PTGS1 (ENSGACG00000016097) #23	pdcl (ENSGACG00000016094) #24	rpl28 (ENSGACG00000016089) #25	SEC16A (ENSGACG00000016085) #27	notch1a (ENSGACG00000016083) #28	camsap1a (ENSGACG00000016079) #31	KCNT1 (ENSGACG00000016074)	ENSGACG00000016062	ENSGACG00000016058	NUP188 (ENSGACG00000016051)	phyhd1 (ENSGACG00000016040)	lrrc8aa (ENSGACG00000016038)	dnlz (ENSGACG00000016036)	uck1 (ENSGACG00000016027)	rapgef1b (ENSGACG00000016022)
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00940000161347.a.a.c.b ##9	ENSGT00940000161347.a.b #10	ENSGT00940000154422.d #11	ENSGT00940000155770.b.b #12	ENSGT00940000170274	ENSGT00390000013415.b #13	ENSGT00940000155227.a #14	ENSGT00390000018729.a.f	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #31	ENSGT00940000156880.c.a	ENSGT00390000013040	ENSGT00940000162230	ENSGT00940000162727.a.b	ENSGT00950000183190.a.b.b	ENSGT00390000005742.x	ENSGT00390000004067	ENSGT00390000006287
Pike perch	MODERN SPECIES	33	ENSSLUG00000017076 #9	ENSSLUG00000017079	prune2 (ENSSLUG00000017092) #11	ENSSLUG00000017129 #12	ENSSLUG00000017225	zgc:73226 (ENSSLUG00000005332) #13	thbs4b (ENSSLUG00000005766) #14	ENSSLUG00000012975	zgc:122979 (ENSSLUG00000013034) #15	hwa (ENSSLUG00000013038) #16	atp5fa1 (ENSSLUG00000013047) #17	zgc:77838 (ENSSLUG00000013069) #18	RNF165 (ENSSLUG00000013083) #19	LOXHD1 (ENSSLUG00000013122) #20	st8sia5 (ENSSLUG00000013165) #21	rpl37 (ENSSLUG00000013190) #22	ptgs1 (ENSSLUG00000013244) #23	pdcl (ENSSLUG00000014454) #24	rpl28 (ENSSLUG00000014460) #25	ENSSLUG00000014465 #26	SEC16A (ENSSLUG00000014475) #27	notch1a (ENSSLUG00000014616) #28	camsap1a (ENSSLUG00000015272) #31	KCNT1 (ENSSLUG00000015334)	psmd5 (ENSSLUG00000015606)	B3GALT9 (ENSSLUG00000015634)	ENSSLUG00000015642	cdk5rap2 (ENSSLUG00000015650)	ENSSLUG00000015677	NUP188 (ENSSLUG00000015753)	dolk (ENSSLUG00000015946)