Osteoglossocephalai	ANCESTRAL SPECIES	8	ENSGT00940000168229	ENSGT00940000161260	ENSGT01050000244968.c.c	ENSGT00940000156730.b	ENSGT00940000156183	ENSGT00940000157286	ENSGT00940000158788	ENSGT00550000074846 #17	ENSGT00390000006029	ENSGT00390000016167 #18	ENSGT00940000156997 #19	ENSGT00390000018830.b ##20	ENSGT00940000164047.c.b	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00940000158865	ENSGT00390000017462	ENSGT01050000244902.a.a.a.a.a.a	ENSGT00940000155897	ENSGT00390000007246	ENSGT00390000009329	ENSGT00940000155498	ENSGT00940000155389	ENSGT00940000157105	ENSGT00390000004161	ENSGT00940000157140.b.a.b.b	ENSGT00940000153288.b	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831
Clupeocephala	ANCESTRAL SPECIES	254					ENSGT00940000155227.a #13	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846 #17	ENSGT00390000006029	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.b ##20	ENSGT00940000164047.c.b	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000167622	ENSGT00940000162727.a.b #33	ENSGT00940000163466	ENSGT00950000183190.a.b.b #34
Euteleosteomorpha	ANCESTRAL SPECIES	208						ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00390000006029	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.b ##20	ENSGT00940000164047.c.b	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000167622	ENSGT00940000162727.a.b #33	ENSGT00940000163466	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.w.b ##35
Acanthomorphata	ANCESTRAL SPECIES	15							ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00940000164047.c.b	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Euacanthomorphacea	ANCESTRAL SPECIES	12	ENSGT00940000154422.d #9	ENSGT00940000176240	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00940000164047.c.b	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36
Percomorphaceae	ANCESTRAL SPECIES	16	ENSGT00940000154422.d #9	ENSGT00940000176240	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00940000164047.c.b	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Perciformes	ANCESTRAL SPECIES	16	ENSGT00940000161347.a.a.d #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT00940000161347.a.a.c.b #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Pike perch	MODERN SPECIES	33	ENSSLUG00000017076 #7	ENSSLUG00000017079	prune2 (ENSSLUG00000017092) #9	ENSSLUG00000017129 #10	ENSSLUG00000017225 #11	zgc:73226 (ENSSLUG00000005332) #12	thbs4b (ENSSLUG00000005766) #13	ENSSLUG00000012975 #14	zgc:122979 (ENSSLUG00000013034) #15	hwa (ENSSLUG00000013038) #16	atp5fa1 (ENSSLUG00000013047) #17	zgc:77838 (ENSSLUG00000013069) #18	RNF165 (ENSSLUG00000013083) #19	LOXHD1 (ENSSLUG00000013122) #20	st8sia5 (ENSSLUG00000013165) #21	rpl37 (ENSSLUG00000013190) #22	ptgs1 (ENSSLUG00000013244) #23	pdcl (ENSSLUG00000014454) #24	rpl28 (ENSSLUG00000014460) #25	ENSSLUG00000014465 #26	SEC16A (ENSSLUG00000014475) #27	notch1a (ENSSLUG00000014616) #28	camsap1a (ENSSLUG00000015272) #29	KCNT1 (ENSSLUG00000015334) #30	psmd5 (ENSSLUG00000015606) #31	B3GALT9 (ENSSLUG00000015634) #32	ENSSLUG00000015642	cdk5rap2 (ENSSLUG00000015650) #34	ENSSLUG00000015677 #34	NUP188 (ENSSLUG00000015753) #35	dolk (ENSSLUG00000015946) #36
Cottioidei	ANCESTRAL SPECIES	18	ENSGT00940000153434.c.b	ENSGT00940000161347.a.a.d #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00940000163466	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37	ENSGT00940000154043.A.j.b	ENSGT00390000008220
Lumpfish	MODERN SPECIES	3	ntrk2b (ENSCLMG00005022322)	hnrpkl (ENSCLMG00005022318)	ENSCLMG00005022316 #7	gna14 (ENSCLMG00005022315) #8	prune2 (ENSCLMG00005022314) #9	ENSCLMG00005022313 #10	zgc:73226 (ENSCLMG00005022312) #12	thbs4b (ENSCLMG00005020990) #13	zgc:122979 (ENSCLMG00005020907) #15	hwa (ENSCLMG00005020905) #16	atp5fa1 (ENSCLMG00005020748) #17	zgc:77838 (ENSCLMG00005020738) #18	RNF165 (ENSCLMG00005020736) #19	LOXHD1 (ENSCLMG00005020728) #20	st8sia5 (ENSCLMG00005020716) #21	rpl37 (ENSCLMG00005020708) #22	PTGS1 (ENSCLMG00005019625) #23	pdcl (ENSCLMG00005019619) #24	rpl28 (ENSCLMG00005019618) #25	ENSCLMG00005019617 #26	ENSCLMG00005019139 #27	notch1a (ENSCLMG00005018745) #28	ENSCLMG00005018730	ENSCLMG00005018729	ENSCLMG00005018727 #29	srek1 (ENSCLMG00005018725)	ankra2 (ENSCLMG00005018718)	btf3 (ENSCLMG00005018714)	foxd1 (ENSCLMG00005018713)	fcho2 (ENSCLMG00005017607)	TNPO1 (ENSCLMG00005017598)
Stickleback	MODERN SPECIES	13	hnrpkl (ENSGACG00000016211)	ENSGACG00000016186 #7	ENSGACG00000016180	prune2 (ENSGACG00000016173) #9	ENSGACG00000016171 #10	ENSGACG00000016170	zgc:73226 (ENSGACG00000016169) #12	thbs4b (ENSGACG00000016162) #13	ENSGACG00000016160 #14	zgc:122979 (ENSGACG00000016157) #15	atp5fa1 (ENSGACG00000016142) #17	zgc:77838 (ENSGACG00000016140) #18	RNF165 (ENSGACG00000016138) #19	LOXHD1 (ENSGACG00000016133) #20	st8sia5 (ENSGACG00000016126) #21	rpl37 (ENSGACG00000016123) #22	PTGS1 (ENSGACG00000016097) #23	pdcl (ENSGACG00000016094) #24	rpl28 (ENSGACG00000016089) #25	SEC16A (ENSGACG00000016085) #27	notch1a (ENSGACG00000016083) #28	camsap1a (ENSGACG00000016079) #29	KCNT1 (ENSGACG00000016074) #30	ENSGACG00000016062 #33	ENSGACG00000016058 #34	NUP188 (ENSGACG00000016051) #35	phyhd1 (ENSGACG00000016040) #37	lrrc8aa (ENSGACG00000016038)	dnlz (ENSGACG00000016036)	uck1 (ENSGACG00000016027)	rapgef1b (ENSGACG00000016022)
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Gilthead seabream	MODERN SPECIES	3	ENSSAUG00010006214 #7	ENSSAUG00010006208	prune2 (ENSSAUG00010006201) #9	ENSSAUG00010006192 #10	ENSSAUG00010006188 #11	zgc:73226 (ENSSAUG00010006180) #12	thbs4b (ENSSAUG00010001952) #13	ENSSAUG00010001870 #14	zgc:122979 (ENSSAUG00010001865) #15	hwa (ENSSAUG00010001860) #16	atp5fa1 (ENSSAUG00010001552) #17	zgc:77838 (ENSSAUG00010001499) #18	RNF165 (ENSSAUG00010021687) #19	LOXHD1 (ENSSAUG00010021665) #20	st8sia5 (ENSSAUG00010021660) #21	rpl37 (ENSSAUG00010021655) #22	PTGS1 (ENSSAUG00010021005) #23	pdcl (ENSSAUG00010020998) #24	rpl28 (ENSSAUG00010020997) #25	ENSSAUG00010020994 #26	SEC16A (ENSSAUG00010019069) #27	notch1a (ENSSAUG00010015439) #28	camsap1a (ENSSAUG00010015121) #29	KCNT1 (ENSSAUG00010014789) #30	psmd5 (ENSSAUG00010014769) #31	B3GALT9 (ENSSAUG00010014763) #32	ENSSAUG00010014760 #33	ENSSAUG00010014714 #34	NUP188 (ENSSAUG00010014672) #35	dolk (ENSSAUG00010014663) #36	phyhd1 (ENSSAUG00010014352) #37
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT00940000153434.c.b	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
European seabass	MODERN SPECIES	9	kcmf1 (ENSDLAG00005009910)	ntrk2b (ENSDLAG00005009848)	hnrpkl (ENSDLAG00005009780)	ENSDLAG00005009025 #10	ENSDLAG00005031069 #11	gna14 (ENSDLAG00005009757) #8	ENSDLAG00005008973 #12	ENSDLAG00005007696 #14	ENSDLAG00005007831 #13	ENSDLAG00005007671 #16	atp5fa1 (ENSDLAG00005007330) #17	C18orf25 (ENSDLAG00005027206) #18	RNF165 (ENSDLAG00005007267) #19	LOXHD1 (ENSDLAG00005006888) #20	ST8SIA5 (ENSDLAG00005006845) #21	rpl37 (ENSDLAG00005006838) #22	ENSDLAG00005006673 #23	ENSDLAG00005006661 #24	ENSDLAG00005006652 #25	ENSDLAG00005030236 #26	ENSDLAG00005004755 #27	ENSDLAG00005001449 #28	ENSDLAG00005001124 #29	ENSDLAG00005000746 #30	ENSDLAG00005000700 #31	ENSDLAG00005000680	ENSDLAG00005000683	ENSDLAG00005030041	ENSDLAG00005000610	spout1 (ENSDLAG00005000535)	ENSDLAG00005000515
Large yellow croaker	MODERN SPECIES	4	kyat1 (ENSLCRG00005002729)	spout1 (ENSLCRG00005002200)	ST6GALNAC6 (ENSLCRG00005002196)	st6galnac4 (ENSLCRG00005002193)	miga2 (ENSLCRG00005002192)	dolpp1 (ENSLCRG00005002189)	NTNG2 (ENSLCRG00005002186)	ENSLCRG00005002183	rapgef1b (ENSLCRG00005000470)	uck1 (ENSLCRG00005000456)	dnlz (ENSLCRG00005000450)	zgc:77838 (ENSLCRG00005000446) #18	RNF165 (ENSLCRG00005000440) #19	LOXHD1 (ENSLCRG00005000408) #20	st8sia5 (ENSLCRG00005000384) #21	rpl37 (ENSLCRG00005000370) #22	PTGS1 (ENSLCRG00005000266) #23	pdcl (ENSLCRG00005019859) #24	ENSLCRG00005019858	ENSLCRG00005019857	rpl28 (ENSLCRG00005019856) #25	ENSLCRG00005019853 #26	ENSLCRG00005019752 #27	notch1a (ENSLCRG00005018363) #28	camsap1a (ENSLCRG00005017883) #29	KCNT1 (ENSLCRG00005017821) #30	psmd5 (ENSLCRG00005017758) #31	B3GALT9 (ENSLCRG00005017749) #32	ENSLCRG00005017715 #34	NUP188 (ENSLCRG00005016511) #35	dolk (ENSLCRG00005016504) #36
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	488					ENSLBEG00000028254 #11	zgc:73226 (ENSLBEG00000028250) #12	thbs4b (ENSLBEG00000028228) #13	ENSLBEG00000028186 #14	zgc:122979 (ENSLBEG00000028149) #15	hwa (ENSLBEG00000028143) #16	atp5fa1 (ENSLBEG00000028138) #17	zgc:77838 (ENSLBEG00000028122) #18	RNF165 (ENSLBEG00000028102) #19	LOXHD1 (ENSLBEG00000028016) #20	st8sia5 (ENSLBEG00000027946) #21	rpl37 (ENSLBEG00000027894) #22	PTGS1 (ENSLBEG00000027881) #23	pdcl (ENSLBEG00000027867) #24	rpl28 (ENSLBEG00000027857) #25	ENSLBEG00000027847 #26	ENSLBEG00000027808 #27	notch1a (ENSLBEG00000027769) #28	ENSLBEG00000027747	ENSLBEG00000027743 #29	KCNT1 (ENSLBEG00000027725) #30
Ballan wrasse	MODERN SPECIES	2645																rpl37 (ENSLBEG00000005693) #22
Tetraodontidae	ANCESTRAL SPECIES	19	ENSGT00940000153434.c.b	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Tetraodon	MODERN SPECIES	19	kcmf1 (ENSTNIG00000007552)	ntrk2b (ENSTNIG00000007553)	hnrpkl (ENSTNIG00000007554)	gna14 (ENSTNIG00000007555) #8	prune2 (ENSTNIG00000007556) #9	ENSTNIG00000007557 #10	ENSTNIG00000000733 #11	zgc:73226 (ENSTNIG00000014273) #12	thbs4b (ENSTNIG00000014272) #13	zgc:122979 (ENSTNIG00000014271) #15	atp5fa1 (ENSTNIG00000007010) #17	zgc:77838 (ENSTNIG00000007009) #18	RNF165 (ENSTNIG00000006462) #19	LOXHD1 (ENSTNIG00000006461) #20	st8sia5 (ENSTNIG00000006460) #21	rpl37 (ENSTNIG00000006459) #22	ptgs1 (ENSTNIG00000006458) #23	ENSTNIG00000001070 #24	rpl28 (ENSTNIG00000002577) #25	ENSTNIG00000002576 #26	SEC16A (ENSTNIG00000002575) #27	notch1a (ENSTNIG00000007203) #28	camsap1a (ENSTNIG00000018750) #29	KCNT1 (ENSTNIG00000018751) #30	psmd5 (ENSTNIG00000018752) #31	ENSTNIG00000018753 #33	ENSTNIG00000018754 #34	NUP188 (ENSTNIG00000018755) ##35	dolk (ENSTNIG00000018757) #36	phyhd1 (ENSTNIG00000018758) #37	lrrc8aa (ENSTNIG00000018759)
Fugu	MODERN SPECIES	18	ENSTRUG00000033321	hnrpkl (ENSTRUG00000000535)	ENSTRUG00000000423 #7	gna14 (ENSTRUG00000025929) #8	prune2 (ENSTRUG00000017951) #9	ENSTRUG00000025919 #10	ENSTRUG00000028846 #11	zgc:73226 (ENSTRUG00000017987) #12	thbs4b (ENSTRUG00000017990) #13	zgc:122979 (ENSTRUG00000018029) #15	hwa (ENSTRUG00000024774) #16	atp5fa1 (ENSTRUG00000018034) #17	zgc:77838 (ENSTRUG00000025151) #18	RNF165 (ENSTRUG00000018046) #19	st8sia5 (ENSTRUG00000018059) #21	rpl37 (ENSTRUG00000018067) #22	PTGS1 (ENSTRUG00000018069) #23	pdcl (ENSTRUG00000024706) #24	rpl28 (ENSTRUG00000025383) #25	ENSTRUG00000031543 #26	ENSTRUG00000018095 #27	notch1a (ENSTRUG00000018113) #28	KCNT1 (ENSTRUG00000021073) #30	psmd5 (ENSTRUG00000018185) #31	B3GALT9 (ENSTRUG00000018190) #32	ENSTRUG00000027922 #33	ENSTRUG00000018229 #34	NUP188 (ENSTRUG00000018293) #35	dolk (ENSTRUG00000018325) #36	lrrc8aa (ENSTRUG00000018330)	dnlz (ENSTRUG00000032319)
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Anabantaria	ANCESTRAL SPECIES	12	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Zig-zag eel	MODERN SPECIES	3	ENSMAMG00000017014 #7	gna14 (ENSMAMG00000017019) #8	prune2 (ENSMAMG00000017035) #9	ENSMAMG00000017069	ENSMAMG00000017089 #10	ENSMAMG00000017146 #12	thbs4b (ENSMAMG00000017169) #13	ENSMAMG00000017218 #14	ENSMAMG00000017288 #15	hwa (ENSMAMG00000017297) #16	atp5fa1 (ENSMAMG00000017312) #17	C18orf25 (ENSMAMG00000017338) #18	RNF165 (ENSMAMG00000017346) #19	LOXHD1 (ENSMAMG00000017376) #20	ST8SIA5 (ENSMAMG00000017453) #21	rpl37 (ENSMAMG00000025959) #22	ENSMAMG00000017493 #23	ENSMAMG00000017513 #24	ENSMAMG00000017519 #25	ENSMAMG00000017628 #26	ENSMAMG00000017538 #27	ENSMAMG00000017642 #28	ENSMAMG00000017705 #29	ENSMAMG00000017747 #30	ENSMAMG00000017804 #31	ENSMAMG00000017843 #32	ENSMAMG00000027166 #33	cdk5rap2 (ENSMAMG00000017869) #34	NUP188 (ENSMAMG00000017976) #35	dolk (ENSMAMG00000018058) #36	phyhd1 (ENSMAMG00000018063) #37
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37	ENSGT00940000154043.A.j.b
Siamese fighting fish	MODERN SPECIES	3	ntrk2b (ENSBSLG00000002567)	hnrpkl (ENSBSLG00000002500)	gna14 (ENSBSLG00000002432) #8	prune2 (ENSBSLG00000020016) #9	ENSBSLG00000019298 #10	ENSBSLG00000019281 #11	zgc:73226 (ENSBSLG00000019274) #12	thbs4b (ENSBSLG00000018097) #13	ENSBSLG00000018074 #14	zgc:122979 (ENSBSLG00000018070) #15	hwa (ENSBSLG00000018063) #16	atp5fa1 (ENSBSLG00000018010) #17	zgc:77838 (ENSBSLG00000017996) #18	RNF165 (ENSBSLG00000017988) #19	st8sia5 (ENSBSLG00000017697) #21	rpl37 (ENSBSLG00000017665) #22	PTGS1 (ENSBSLG00000016014) #23	pdcl (ENSBSLG00000015987) #24	rpl28 (ENSBSLG00000015979) #25	ENSBSLG00000015976 #26	SEC16A (ENSBSLG00000015741) #27	notch1a (ENSBSLG00000012905) #28	camsap1a (ENSBSLG00000012780) #29	KCNT1 (ENSBSLG00000012710) #30	psmd5 (ENSBSLG00000012692) #31	B3GALT9 (ENSBSLG00000012689) #32	ENSBSLG00000012589 #34	NUP188 (ENSBSLG00000011267) #35	dolk (ENSBSLG00000011240) #36	phyhd1 (ENSBSLG00000011217) #37	lrrc8aa (ENSBSLG00000011213)
Climbing perch	MODERN SPECIES	3	gna14 (ENSATEG00000014393) #8	prune2 (ENSATEG00000014366) #9	ENSATEG00000014327 #10	ENSATEG00000029519 #11	ENSATEG00000014305 #12	thbs4b (ENSATEG00000014243) #13	ENSATEG00000014122 #14	ENSATEG00000014105 #15	hwa (ENSATEG00000014095) #16	atp5fa1 (ENSATEG00000014074) #17	C18orf25 (ENSATEG00000014053) #18	RNF165 (ENSATEG00000014022) #19	ENSATEG00000014014 #20	ENSATEG00000013978 #20	ST8SIA5 (ENSATEG00000028585) #21	rpl37 (ENSATEG00000013933) #22	ENSATEG00000013897 #23	ENSATEG00000013860 #24	ENSATEG00000013839 #25	ENSATEG00000013831 #26	ENSATEG00000013761 #27	ENSATEG00000013629 #28	ENSATEG00000029256 #29	ENSATEG00000013502 #30	ENSATEG00000013483 #31	ENSATEG00000013473 #32	cdk5rap2 (ENSATEG00000013264) #34	NUP188 (ENSATEG00000013129) #35	dolk (ENSATEG00000013104) #36	phyhd1 (ENSATEG00000013069) #37	lrrc8aa (ENSATEG00000013062)
Carangaria	ANCESTRAL SPECIES	17	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Carangaria_A	ANCESTRAL SPECIES	18	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Seriola	ANCESTRAL SPECIES	19	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00600000085659.b	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24
Yellowtail amberjack	MODERN SPECIES	2796	gna14 (ENSSLDG00000005622) #8	prune2 (ENSSLDG00000005588) #9	ENSSLDG00000005501 #10	ENSSLDG00000005480 #11	zgc:73226 (ENSSLDG00000005473) #12	thbs4b (ENSSLDG00000005407) #13	ENSSLDG00000005269 #14	ENSSLDG00000005223	zgc:122979 (ENSSLDG00000005215) #15	hwa (ENSSLDG00000005194) #16	ATP5F1A (ENSSLDG00000005152) #17	zgc:77838 (ENSSLDG00000005097) #18	RNF165 (ENSSLDG00000005052) #19	LOXHD1 (ENSSLDG00000004940) #20	st8sia5 (ENSSLDG00000004842) #21	rpl37 (ENSSLDG00000004788) #22	ptgs1 (ENSSLDG00000004750) #23	pdcl (ENSSLDG00000004736) #24
Barramundi perch	MODERN SPECIES	101	hnrpkl (ENSLCAG00010002964)	ENSLCAG00010002954 #7	ENSLCAG00010002949	prune2 (ENSLCAG00010002946) #9	ENSLCAG00010002896 #10	ENSLCAG00010002878 #11	zgc:73226 (ENSLCAG00010002874) #12	thbs4b (ENSLCAG00010002473) #13	ENSLCAG00010002380 #14	zgc:122979 (ENSLCAG00010002377) #15	atp5fa1 (ENSLCAG00010002375) #17	zgc:77838 (ENSLCAG00010002371) #18	RNF165 (ENSLCAG00010002367) #19	LOXHD1 (ENSLCAG00010002359) #20	st8sia5 (ENSLCAG00010002346) #21	rpl37 (ENSLCAG00010002333) #22	ptgs1 (ENSLCAG00010002329) #23	pdcl (ENSLCAG00010002322) #24	rpl28 (ENSLCAG00010002317) #25	ENSLCAG00010002313 #26	ENSLCAG00010002099 #27	notch1a (ENSLCAG00010001977) #28	camsap1a (ENSLCAG00010001967) #29	KCNT1 (ENSLCAG00010001943) #30	psmd5 (ENSLCAG00010001921) #31	B3GALT9 (ENSLCAG00010001917) #32	ENSLCAG00010001866 #33	ENSLCAG00010001771 #34	NUP188 (ENSLCAG00010001675) #35	dolk (ENSLCAG00010001654) #36	phyhd1 (ENSLCAG00010001651) #37
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT00940000153434.c.b	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37	ENSGT00940000154043.A.j.b
Turbot	MODERN SPECIES	7	hnrpkl (ENSSMAG00000007969)	ENSSMAG00000008012 #7	gna14 (ENSSMAG00000008031) #8	prune2 (ENSSMAG00000008036) #9	ENSSMAG00000008072 #10	ENSSMAG00000008084 #11	ENSSMAG00000008091 #12	thbs4b (ENSSMAG00000008125) #13	ENSSMAG00000008185 #15	hwa (ENSSMAG00000008544) #16	atp5fa1 (ENSSMAG00000008519) #17	C18orf25 (ENSSMAG00000008557) #18	RNF165 (ENSSMAG00000032415) #19	LOXHD1 (ENSSMAG00000008589) #20	ST8SIA5 (ENSSMAG00000008655) #21	rpl37 (ENSSMAG00000008688) #22	ENSSMAG00000008708 #23	ENSSMAG00000008737 #24	ENSSMAG00000008756 #25	ENSSMAG00000008778	ENSSMAG00000008794 #27	ENSSMAG00000008857 #28	ENSSMAG00000008955 #29	ENSSMAG00000008991 #30	ENSSMAG00000009172 #31	ENSSMAG00000028675 #32	ENSSMAG00000009277 #34	NUP188 (ENSSMAG00000009352) #35	dolk (ENSSMAG00000009434) #36	phyhd1 (ENSSMAG00000009440) #37	lrrc8aa (ENSSMAG00000009462)
Tongue sole	MODERN SPECIES	5	gna14 (ENSCSEG00000001032) #8	prune2 (ENSCSEG00000001044) #9	ENSCSEG00000001049	ENSCSEG00000001055 #10	ENSCSEG00000001087 #11	zgc:73226 (ENSCSEG00000001089) #12	thbs4b (ENSCSEG00000001095) #13	ENSCSEG00000001109	zgc:122979 (ENSCSEG00000001112) #15	hwa (ENSCSEG00000001116) #16	atp5fa1 (ENSCSEG00000001126) #17	zgc:77838 (ENSCSEG00000001156) #18	RNF165 (ENSCSEG00000001163) #19	LOXHD1 (ENSCSEG00000001178) #20	st8sia5 (ENSCSEG00000001273) #21	rpl37 (ENSCSEG00000001286) #22	ptgs1 (ENSCSEG00000001302) #23	pdcl (ENSCSEG00000001308) #24	rpl28 (ENSCSEG00000001312) #25	ENSCSEG00000001317 #26	ENSCSEG00000001326 #27	ENSCSEG00000001345	notch1a (ENSCSEG00000001351) #28	camsap1a (ENSCSEG00000001372) #29	KCNT1 (ENSCSEG00000001395) #30	psmd5 (ENSCSEG00000001432) #31	ENSCSEG00000001439	ENSCSEG00000001443 #33	ENSCSEG00000001446	ENSCSEG00000001451 ##34	setd1ba (ENSCSEG00000001458)
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000163466.g.a	ENSGT00940000167622	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000163466.g.a	ENSGT00940000167622.a	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35
Oryzias	ANCESTRAL SPECIES	9	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT01100000264989	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000158788	ENSGT00940000157286	ENSGT00940000156183	ENSGT00940000156730.b	ENSGT01050000244968.c.c
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT01100000264989	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000158788	ENSGT00940000157286	ENSGT00940000156183	ENSGT00940000156730.b	ENSGT01050000244968.c.c
Javanese ricefish	MODERN SPECIES	3	ENSOJAG00000020754 #7	gna14 (ENSOJAG00000020728) #8	prune2 (ENSOJAG00000020711) #9	ENSOJAG00000020258 #10	ENSOJAG00000020231 #11	zgc:73226 (ENSOJAG00000020227) #12	thbs4b (ENSOJAG00000018504) #13	ENSOJAG00000018401 #14	zgc:122979 (ENSOJAG00000018394) #15	hwa (ENSOJAG00000018370) #16	atp5fa1 (ENSOJAG00000018308) #17	zgc:77838 (ENSOJAG00000018287) #18	RNF165 (ENSOJAG00000018268) #19	LOXHD1 (ENSOJAG00000017805) #20	st8sia5 (ENSOJAG00000017763) #21	rpl37 (ENSOJAG00000017750) #22	PTGS1 (ENSOJAG00000017650) #23	pdcl (ENSOJAG00000017635) #24	rpl28 (ENSOJAG00000017615) #25	rpl28 (ENSOJAG00000015806) #25	ENSOJAG00000015796	SEC16A (ENSOJAG00000015472) #27	notch1a (ENSOJAG00000011572) #28	camsap1a (ENSOJAG00000011262) #29	KCNT1 (ENSOJAG00000009198) #30	psmd5 (ENSOJAG00000008893) #31	B3GALT9 (ENSOJAG00000008859) #32	ENSOJAG00000008824	mtrex (ENSOJAG00000006917)	PLPP1 (ENSOJAG00000006897)	CSGALNACT1 (ENSOJAG00000006876)
Indian medaka	MODERN SPECIES	30	gna14 (ENSOMEG00000010524) #8	prune2 (ENSOMEG00000010475) #9	ENSOMEG00000010420	ENSOMEG00000010389 #10	ENSOMEG00000010335 #11	zgc:73226 (ENSOMEG00000010315) #12	thbs4b (ENSOMEG00000010286) #13	ENSOMEG00000010200 #14	zgc:122979 (ENSOMEG00000010133) #15	hwa (ENSOMEG00000010118) #16	atp5fa1 (ENSOMEG00000010085) #17	zgc:77838 (ENSOMEG00000010042) #18	RNF165 (ENSOMEG00000009998) #19	LOXHD1 (ENSOMEG00000009953) #20	st8sia5 (ENSOMEG00000009902) #21	rpl37 (ENSOMEG00000009843) #22	PTGS1 (ENSOMEG00000009787) #23	pdcl (ENSOMEG00000009734) #24	rpl28 (ENSOMEG00000009716) #25	ENSOMEG00000009696	ENSOMEG00000009643 #27	notch1a (ENSOMEG00000009528) #28	CAMSAP1 (ENSOMEG00000009410) #29	KCNT1 (ENSOMEG00000009245) #30	psmd5 (ENSOMEG00000009035) #31	B3GALT9 (ENSOMEG00000009001) #32	ENSOMEG00000008984	DHX29 (ENSOMEG00000008943)	mtrex (ENSOMEG00000008825)	PLPP1 (ENSOMEG00000008698)	CSGALNACT1 (ENSOMEG00000008659)
Oryzias_a	ANCESTRAL SPECIES	12	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000176240	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT01100000264989	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000158788	ENSGT00940000157286	ENSGT00940000156183	ENSGT00940000156730.b	ENSGT01050000244968.c.c
Japanese Medaka HdrR	MODERN SPECIES	3	gna14 (ENSORLG00000004772) #8	prune2 (ENSORLG00000004782) #9	ENSORLG00000030222	ENSORLG00000004853 #10	ENSORLG00000028770	ENSORLG00000024862 #11	zgc:73226 (ENSORLG00000004862) #12	thbs4b (ENSORLG00000004949) #13	ENSORLG00000004960 #14	zgc:122979 (ENSORLG00000004974) #15	atp5fa1 (ENSORLG00000005012) #17	zgc:77838 (ENSORLG00000005021) #18	RNF165 (ENSORLG00000005031) #19	LOXHD1 (ENSORLG00000005066) #20	st8sia5 (ENSORLG00000005048) #21	rpl37 (ENSORLG00000027763) #22	ENSORLG00000021941	ptgs1 (ENSORLG00000005095) #23	pdcl (ENSORLG00000005100) #24	ENSORLG00000024897	rpl28 (ENSORLG00000005108) #25	ENSORLG00000005113	ENSORLG00000005139 #27	notch1a (ENSORLG00000005182) #28	camsap1a (ENSORLG00000005234) #29	ENSORLG00000005264 #30	psmd5 (ENSORLG00000005294) #31	B3GALT9 (ENSORLG00000005306) #32	ENSORLG00000005320	DHX29 (ENSORLG00000005364)	mtrex (ENSORLG00000005443)
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	1685																rpl37 (ENSOSIG00000012106) #22
Chinese medaka	MODERN SPECIES	1664																rpl37 (ENSOSIG00000012078) #22
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00940000167622.a	ENSGT00940000163466.g.a	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35
Aplocheiloidei	ANCESTRAL SPECIES	5	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000163466.g.a	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Mangrove rivulus	MODERN SPECIES	9	ENSKMAG00000012188 #7	gna14 (ENSKMAG00000012176) #8	gna14 (ENSKMAG00000012157) #8	prune2 (ENSKMAG00000012116) #9	ENSKMAG00000012050 #10	ENSKMAG00000012025 #11	zgc:73226 (ENSKMAG00000011993) #12	thbs4b (ENSKMAG00000011927) #13	zgc:122979 (ENSKMAG00000011895) #15	hwa (ENSKMAG00000011880) #16	atp5fa1 (ENSKMAG00000011837) #17	zgc:77838 (ENSKMAG00000011757) #18	RNF165 (ENSKMAG00000011715) #19	LOXHD1 (ENSKMAG00000011600) #20	st8sia5 (ENSKMAG00000011551) #21	rpl37 (ENSKMAG00000011480) #22	ptgs1 (ENSKMAG00000011446) #23	pdcl (ENSKMAG00000011429) #24	rpl28 (ENSKMAG00000011412) #25	ENSKMAG00000011397 #26	ENSKMAG00000011196 #27	notch1a (ENSKMAG00000011050) #28	camsap1a (ENSKMAG00000010972) #29	KCNT1 (ENSKMAG00000010894) #30	psmd5 (ENSKMAG00000010852) #31	B3GALT9 (ENSKMAG00000010840) #32	cdk5rap2 (ENSKMAG00000010733) #34	NUP188 (ENSKMAG00000010645) #35	dolk (ENSKMAG00000010614) #36	phyhd1 (ENSKMAG00000010595) #37	lrrc8aa (ENSKMAG00000010580)
Turquoise killifish	MODERN SPECIES	1611	gna14 (ENSNFUG00015003936) #8	PRUNE2 (ENSNFUG00015003938) #9	ENSNFUG00015003987 #10	Nfu_g_1_006391 (ENSNFUG00015004098) #11	ENSNFUG00015004099	zgc:73226 (ENSNFUG00015004102) #12	thbs4b (ENSNFUG00015004154) #13	ENSNFUG00015004431 #14	DNAJB5 (ENSNFUG00015004497) #15	hwa (ENSNFUG00015004500) #16	atp5fa1 (ENSNFUG00015003380) #17	C21H18ORF25 (ENSNFUG00015003393) #18	RNF165 (ENSNFUG00015003400) #19	ENSNFUG00015003407	ST8SIA5 (ENSNFUG00015003451) #20	RPL37 (ENSNFUG00015003531) #22	PTGS1 (ENSNFUG00015003556) #23	PDCL (ENSNFUG00015003618) #24	rpl28 (ENSNFUG00015003622) #25	ENSNFUG00015003627 #26	SEC16A (ENSNFUG00015003654) #27	notch1a (ENSNFUG00015003776) #28	CAMSAP1 (ENSNFUG00015004050) #29	KCNT1 (ENSNFUG00015004125) #30	psmd5 (ENSNFUG00015004192) #31	ENSNFUG00015004211	ENSNFUG00015004235	ENSNFUG00015004241	B3GALT9 (ENSNFUG00015004245) #32	ENSNFUG00015004252	CDK5RAP2 (ENSNFUG00015004279) #34
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT00940000161347.a.b.g.a #8	ENSGT00940000161347.a.b.h #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00940000167622.a	ENSGT00940000163466.g.a	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00940000161347.a.b.g.a #8	ENSGT00940000161347.a.b.h #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00940000167622.a	ENSGT00940000163466.g.a	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35
Poecilia	ANCESTRAL SPECIES	12	ENSGT00940000161347.a.b.g.a #8	ENSGT00940000161347.a.b.h #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
NAME_6	ANCESTRAL SPECIES	13	ENSGT00940000161347.a.b.g.a #8	ENSGT00940000161347.a.b.h #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a.b #13	ENSGT00390000018729.a.f.b #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Sailfin molly	MODERN SPECIES	1484												zgc:77838 (ENSPLAG00000003491) #18	RNF165 (ENSPLAG00000003477) #19	LOXHD1 (ENSPLAG00000003440) #20	st8sia5 (ENSPLAG00000003262) #21	rpl37 (ENSPLAG00000003255) #22	ptgs1 (ENSPLAG00000003244) #23	pdcl (ENSPLAG00000003222) #24	rpl28 (ENSPLAG00000003206) #25	ENSPLAG00000003198 #26	ENSPLAG00000003190 #27	notch1a (ENSPLAG00000003180) #28
Amazon molly	MODERN SPECIES	532														LOXHD1 (ENSPFOG00000001476) #20	st8sia5 (ENSPFOG00000001809) #21	rpl37 (ENSPFOG00000001911) #22	ptgs1 (ENSPFOG00000001976) #23	pdcl (ENSPFOG00000002177) #24	rpl28 (ENSPFOG00000002206) #25	ENSPFOG00000023453 #26	ENSPFOG00000002239 #27	notch1a (ENSPFOG00000002502) #28	camsap1a (ENSPFOG00000003292) #29	KCNT1 (ENSPFOG00000003473) #30	psmd5 (ENSPFOG00000003886) #31	B3GALT9 (ENSPFOG00000020425) #32	ENSPFOG00000004100 #33	cdk5rap2 (ENSPFOG00000005000) #34	NUP188 (ENSPFOG00000005437) #35	phyhd1 (ENSPFOG00000024517) #37	dolk (ENSPFOG00000020426) #36
Platyfish	MODERN SPECIES	22	gna14 (ENSXMAG00000022637) #8	prune2 (ENSXMAG00000026292) #9	ENSXMAG00000004957 #10	ENSXMAG00000026071 #11	zgc:73226 (ENSXMAG00000028910) #12	ENSXMAG00000023621	thbs4b (ENSXMAG00000005071) #13	ENSXMAG00000005101 #14	zgc:122979 (ENSXMAG00000001193) #15	hwa (ENSXMAG00000021928) #16	atp5fa1 (ENSXMAG00000001160) #17	zgc:77838 (ENSXMAG00000005105) #18	RNF165 (ENSXMAG00000029477) #19	LOXHD1 (ENSXMAG00000005112) #20	st8sia5 (ENSXMAG00000025801) #21	rpl37 (ENSXMAG00000005141) #22	ptgs1 (ENSXMAG00000005144) #23	pdcl (ENSXMAG00000005181) #24	rpl28 (ENSXMAG00000005190) #25	ENSXMAG00000021863 #26	ENSXMAG00000005198 #27	notch1a (ENSXMAG00000005227) #28	camsap1a (ENSXMAG00000005317) #29	KCNT1 (ENSXMAG00000005325) #30	psmd5 (ENSXMAG00000005375) #31	B3GALT9 (ENSXMAG00000005391) #32	ENSXMAG00000028819	ENSXMAG00000026533	cdk5rap2 (ENSXMAG00000005618) #34	NUP188 (ENSXMAG00000005642) #35	phyhd1 (ENSXMAG00000005677) #37
NAME_4	ANCESTRAL SPECIES		ENSGT00940000161347.a.b.g.b #8	ENSGT00940000161347.a.b.g.a #8	ENSGT00940000161347.a.b.h #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Mummichog	MODERN SPECIES	2246					ENSFHEG00000007033 #10	ENSFHEG00000007045 #11	zgc:73226 (ENSFHEG00000007078) #12	thbs4b (ENSFHEG00000007172) #13	zgc:122979 (ENSFHEG00000007284) #15	hwa (ENSFHEG00000007312) #16	atp5fa1 (ENSFHEG00000007366) #17	zgc:77838 (ENSFHEG00000007405) #18	RNF165 (ENSFHEG00000007448) #19	LOXHD1 (ENSFHEG00000007574) #20	st8sia5 (ENSFHEG00000000701) #21	rpl37 (ENSFHEG00000007607) #22	ptgs1 (ENSFHEG00000007674) #23	pdcl (ENSFHEG00000007709) #24	rpl28 (ENSFHEG00000007732) #25	ENSFHEG00000007741 #26	ENSFHEG00000007759 #27	notch1a (ENSFHEG00000007960) #28	CAMSAP1 (ENSFHEG00000008000) #29	KCNT1 (ENSFHEG00000008076) #30	psmd5 (ENSFHEG00000008091) #31	B3GALT9 (ENSFHEG00000008106) #32	ENSFHEG00000008119	ENSFHEG00000008127	ENSFHEG00000008137	cdk5rap2 (ENSFHEG00000008160) #34	ENSFHEG00000008188 #34
Sheepshead minnow	MODERN SPECIES	346	gna14 (ENSCVAG00000023115) #8	gna14 (ENSCVAG00000023110) #8	gna14 (ENSCVAG00000023097) #8	gna14 (ENSCVAG00000023089) #8	prune2 (ENSCVAG00000023071) #9	ENSCVAG00000023053 #10	ENSCVAG00000022974 #11	zgc:73226 (ENSCVAG00000022967) #12	thbs4b (ENSCVAG00000022928) #13	zgc:122979 (ENSCVAG00000022880) #15	hwa (ENSCVAG00000022877) #16	atp5fa1 (ENSCVAG00000022871) #17	zgc:77838 (ENSCVAG00000022863) #18	LOXHD1 (ENSCVAG00000022832) #20	st8sia5 (ENSCVAG00000022606) #21	rpl37 (ENSCVAG00000022561) #22	ptgs1 (ENSCVAG00000022549) #23	pdcl (ENSCVAG00000022482) #24	rpl28 (ENSCVAG00000022473) #25	ENSCVAG00000000578 #26	ENSCVAG00000022453 #27	notch1a (ENSCVAG00000022372) #28	camsap1a (ENSCVAG00000000572) #29
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000167622	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35
Cichlidae	ANCESTRAL SPECIES	10	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000180069	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000167622	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000153434.c.b	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000180069	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000167622	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000155181.c.b	ENSGT00940000153434.c.b	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00940000156090.b #15	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000180069	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000167622	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000155181.c.b	ENSGT00940000153434.c.b	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00940000156090.b #15	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000180069	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000167622	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34
Burton s mouthbrooder	MODERN SPECIES	287	ntrk2b (ENSHBUG00000006471)	hnrpkl (ENSHBUG00000006535)	ENSHBUG00000006568 #7	gna14 (ENSHBUG00000006601) #8	prune2 (ENSHBUG00000006630) #9	ENSHBUG00000006716 #10	ENSHBUG00000006728 #11	zgc:73226 (ENSHBUG00000006735) #12	thbs4b (ENSHBUG00000006807) #13	zgc:122979 (ENSHBUG00000006957) #15	atp5fa1 (ENSHBUG00000006988) #17	zgc:77838 (ENSHBUG00000007043) #18	RNF165 (ENSHBUG00000007084) #19	LOXHD1 (ENSHBUG00000007211) #20	st8sia5 (ENSHBUG00000007237) #21	rpl37 (ENSHBUG00000007271) #22	ptgs1 (ENSHBUG00000007346) #23	pdcl (ENSHBUG00000000181) #24	rpl28 (ENSHBUG00000007390) #25	ENSHBUG00000000185 #26	ENSHBUG00000007455 #27	notch1a (ENSHBUG00000007562) #28	camsap1a (ENSHBUG00000007594) #29	KCNT1 (ENSHBUG00000007657) #30	psmd5 (ENSHBUG00000007664) #31	B3GALT9 (ENSHBUG00000007682) #32	ENSHBUG00000007803 #33	cdk5rap2 (ENSHBUG00000008049) #34	NUP188 (ENSHBUG00000008224) #35	dolk (ENSHBUG00000008248) #36	phyhd1 (ENSHBUG00000008290) #37
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000155181.c.b	ENSGT00940000153434.c.b	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00940000156090.b #15	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00940000177433	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000180069	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000167622.d	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34
P. nyererei	MODERN SPECIES	297	kcmf1 (ENSPNYG00000005968)	ntrk2b (ENSPNYG00000005928)	hnrpkl (ENSPNYG00000005907)	ENSPNYG00000005729 #7	gna14 (ENSPNYG00000005542) #8	prune2 (ENSPNYG00000005490) #9	ENSPNYG00000005424 #10	zgc:73226 (ENSPNYG00000005402) #12	thbs4b (ENSPNYG00000005339) #13	zgc:122979 (ENSPNYG00000005251) #15	atp5fa1 (ENSPNYG00000005220) #17	zgc:77838 (ENSPNYG00000005206) #18	RNF165 (ENSPNYG00000005178) #19	LOXHD1 (ENSPNYG00000005032) #20	st8sia5 (ENSPNYG00000004999) #21	rpl37 (ENSPNYG00000004836) #22	ptgs1 (ENSPNYG00000004794) #23	pdcl (ENSPNYG00000004774) #24	rpl28 (ENSPNYG00000004757) #25	ENSPNYG00000004740 #26	ENSPNYG00000004590 #27	notch1a (ENSPNYG00000004505) #28	ENSPNYG00000004495	ENSPNYG00000004482 #29	ENSPNYG00000004470	KCNT1 (ENSPNYG00000004382) #30	psmd5 (ENSPNYG00000004358) #31	B3GALT9 (ENSPNYG00000004354) #32	ENSPNYG00000004339	ENSPNYG00000004289 #33	ENSPNYG00000004106 #34
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00940000155181.c.b	ENSGT00940000153434.c.b	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00940000156090.b #15	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000167622.d	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36
Zebra mbuna	MODERN SPECIES	1110	kcmf1 (ENSMZEG00005000748)	ntrk2b (ENSMZEG00005000780)	hnrpkl (ENSMZEG00005000835)	ENSMZEG00005000847 #7	gna14 (ENSMZEG00005000859) #8	ENSMZEG00005000914 #10	ENSMZEG00005000995	zgc:73226 (ENSMZEG00005001030) #12	thbs4b (ENSMZEG00005001057) #13	zgc:122979 (ENSMZEG00005001139) #15	atp5fa1 (ENSMZEG00005001795) #17	zgc:77838 (ENSMZEG00005001835) #18	RNF165 (ENSMZEG00005001861) #19	LOXHD1 (ENSMZEG00005001886) #20	st8sia5 (ENSMZEG00005002037) #21	rpl37 (ENSMZEG00005002074) #22	ptgs1 (ENSMZEG00005002096) #23	pdcl (ENSMZEG00005002137) #24	rpl28 (ENSMZEG00005002151) #25	ENSMZEG00005002172 #27	notch1a (ENSMZEG00005002211) #28	camsap1a (ENSMZEG00005002300) #29	KCNT1 (ENSMZEG00005002333) #30	psmd5 (ENSMZEG00005002391) #31	B3GALT9 (ENSMZEG00005002398) #32	ENSMZEG00005002418 #33	ENSMZEG00005002525	cdk5rap2 (ENSMZEG00005002555) #34	NUP188 (ENSMZEG00005002658) #35	dolk (ENSMZEG00005002745) #36	phyhd1 (ENSMZEG00005002750) #37
Eastern happy	MODERN SPECIES	19	ntrk2b (ENSACLG00000001565)	hnrpkl (ENSACLG00000001537)	ENSACLG00000000953 #7	gna14 (ENSACLG00000000940) #8	prune2 (ENSACLG00000000900) #9	ENSACLG00000000639 #10	ENSACLG00000000628 #11	zgc:73226 (ENSACLG00000000619) #12	thbs4b (ENSACLG00000000559) #13	zgc:122979 (ENSACLG00000000342) #15	atp5fa1 (ENSACLG00000000300) #17	zgc:77838 (ENSACLG00000000247) #18	RNF165 (ENSACLG00000000204) #19	LOXHD1 (ENSACLG00000027936) #20	st8sia5 (ENSACLG00000027929) #21	rpl37 (ENSACLG00000027921) #22	ptgs1 (ENSACLG00000027920) #23	pdcl (ENSACLG00000027918) #24	rpl28 (ENSACLG00000027917) #25	ENSACLG00000027916 #26	ENSACLG00000027914 #27	notch1a (ENSACLG00000027910) #28	camsap1a (ENSACLG00000027907) #29	ENSACLG00000027906	KCNT1 (ENSACLG00000027904) #30	psmd5 (ENSACLG00000027903) #31	B3GALT9 (ENSACLG00000027902) #32	ENSACLG00000027895	ENSACLG00000027892 #33	cdk5rap2 (ENSACLG00000027883) #34	NUP188 (ENSACLG00000027877) #35
Lyretail cichlid	MODERN SPECIES	336	kcmf1 (ENSNBRG00000005528)	ntrk2b (ENSNBRG00000005565)	hnrpkl (ENSNBRG00000005627)	ENSNBRG00000005658 #7	gna14 (ENSNBRG00000005690) #8	prune2 (ENSNBRG00000005724) #9	ENSNBRG00000005780 #10	zgc:73226 (ENSNBRG00000006016) #12	thbs4b (ENSNBRG00000006050) #13	zgc:122979 (ENSNBRG00000006134) #15	atp5fa1 (ENSNBRG00000006291) #17	zgc:77838 (ENSNBRG00000006337) #18	RNF165 (ENSNBRG00000006346) #19	LOXHD1 (ENSNBRG00000006392) #20	st8sia5 (ENSNBRG00000006603) #21	rpl37 (ENSNBRG00000006627) #22	ptgs1 (ENSNBRG00000006683) #23	pdcl (ENSNBRG00000006719) #24	rpl28 (ENSNBRG00000006729) #25	ENSNBRG00000006752 #26	ENSNBRG00000006772 #27	notch1a (ENSNBRG00000006798) #28	ENSNBRG00000006872	ENSNBRG00000006878	ENSNBRG00000006885 #29	KCNT1 (ENSNBRG00000006901) #30	ENSNBRG00000006956	psmd5 (ENSNBRG00000006970) #31	B3GALT9 (ENSNBRG00000006983) #32	ENSNBRG00000007008 #33	cdk5rap2 (ENSNBRG00000007141) #34
Nile tilapia	MODERN SPECIES	19	hnrpkl (ENSONIG00000007565)	ENSONIG00000007564 #7	gna14 (ENSONIG00000007563) #8	prune2 (ENSONIG00000007562) #9	ENSONIG00000007540 #10	ENSONIG00000042771 #11	zgc:73226 (ENSONIG00000007539) #12	thbs4b (ENSONIG00000007533) #13	zgc:122979 (ENSONIG00000007532) #15	hwa (ENSONIG00000036146) #16	atp5fa1 (ENSONIG00000007531) #17	zgc:77838 (ENSONIG00000042524) #18	RNF165 (ENSONIG00000028971) #19	LOXHD1 (ENSONIG00000007521) #20	st8sia5 (ENSONIG00000007511) #21	rpl37 (ENSONIG00000007508) #22	ptgs1 (ENSONIG00000007497) #23	pdcl (ENSONIG00000028580) #24	rpl28 (ENSONIG00000007486) #25	ENSONIG00000043037 #26	ENSONIG00000007476 #27	notch1a (ENSONIG00000007454) #28	camsap1a (ENSONIG00000007450) #29	KCNT1 (ENSONIG00000007444) #30	psmd5 (ENSONIG00000007437) #31	B3GALT9 (ENSONIG00000007435) #32	ENSONIG00000007416 #33	ENSONIG00000028088	ENSONIG00000007403 #34	NUP188 (ENSONIG00000007388) #35	dolk (ENSONIG00000007387) #36
Midas cichlid	MODERN SPECIES	213	hnrpkl (ENSACIG00000014814)	ENSACIG00000014795 #7	gna14 (ENSACIG00000014767) #8	prune2 (ENSACIG00000014725) #9	ENSACIG00000014705	ENSACIG00000014647 #10	zgc:73226 (ENSACIG00000014631) #12	thbs4b (ENSACIG00000014596) #13	ENSACIG00000014575 #14	zgc:122979 (ENSACIG00000014559) #15	atp5fa1 (ENSACIG00000014539) #17	zgc:77838 (ENSACIG00000014514) #18	RNF165 (ENSACIG00000014503) #19	LOXHD1 (ENSACIG00000014444) #20	st8sia5 (ENSACIG00000014425) #21	rpl37 (ENSACIG00000014406) #22	ptgs1 (ENSACIG00000014389) #23	pdcl (ENSACIG00000014381) #24	rpl28 (ENSACIG00000014369) #25	SEC16A (ENSACIG00000014331) #27	notch1a (ENSACIG00000014093) #28
Pomacentridae	ANCESTRAL SPECIES	12	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Bicolor damselfish	MODERN SPECIES	521	GID4 (ENSSPAG00000014380)	atpaf2 (ENSSPAG00000014388)	tom1l2 (ENSSPAG00000014401)	foxl3 (ENSSPAG00000014447)	ENSSPAG00000014463 #10	zgc:73226 (ENSSPAG00000014522) #12	thbs4b (ENSSPAG00000014550) #13	ENSSPAG00000014657 #14	zgc:122979 (ENSSPAG00000014793) #15	hwa (ENSSPAG00000014803) #16	atp5fa1 (ENSSPAG00000014814) #17	zgc:77838 (ENSSPAG00000014861) #18	RNF165 (ENSSPAG00000014892) #19	LOXHD1 (ENSSPAG00000014928) #20	st8sia5 (ENSSPAG00000014993) #21	rpl37 (ENSSPAG00000015034) #22	PTGS1 (ENSSPAG00000015087) #23	pdcl (ENSSPAG00000015112) #24	rpl28 (ENSSPAG00000015122) #25	ENSSPAG00000015141 #26	ENSSPAG00000015161 #27	notch1a (ENSSPAG00000015298) #28	camsap1a (ENSSPAG00000015476) #29
Pomacentridae_A	ANCESTRAL SPECIES	10	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Spiny chromis	MODERN SPECIES	334												zgc:77838 (ENSAPOG00000024334) #18	RNF165 (ENSAPOG00000024306) #19	LOXHD1 (ENSAPOG00000024272) #20	st8sia5 (ENSAPOG00000024093) #21	rpl37 (ENSAPOG00000024046) #22	PTGS1 (ENSAPOG00000024020) #23	pdcl (ENSAPOG00000023946) #24	rpl28 (ENSAPOG00000023913) #25	ENSAPOG00000023881 #26	ENSAPOG00000023858 #27	notch1a (ENSAPOG00000023753) #28	camsap1a (ENSAPOG00000023617) #29	KCNT1 (ENSAPOG00000023556) #30	psmd5 (ENSAPOG00000023499) #31	B3GALT9 (ENSAPOG00000023434) #32	ENSAPOG00000023419 #33	ENSAPOG00000023397	NUP188 (ENSAPOG00000023370) #35	dolk (ENSAPOG00000023235) #36	phyhd1 (ENSAPOG00000023215) #37
Amphiprion	ANCESTRAL SPECIES	5	ENSGT00940000161347.a.a #7	ENSGT00940000161347.a.b #8	ENSGT00940000154422.d #9	ENSGT00940000155770.b.b #10	ENSGT00940000170274 #11	ENSGT00390000013415.b #12	ENSGT00940000155227.a #13	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846.jb.b #17	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00390000010743.b.a #23	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00390000011509 #26	ENSGT00940000159324 #27	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000156880.c.a #30	ENSGT00390000013040 #31	ENSGT00940000162230 #32	ENSGT00940000162727.a.b #33	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742.x #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Orange clownfish	MODERN SPECIES	7	ENSAPEG00000019918 #7	gna14 (ENSAPEG00000019943) #8	prune2 (ENSAPEG00000019954) #9	ENSAPEG00000019977 #10	ENSAPEG00000020056 #11	zgc:73226 (ENSAPEG00000020066) #12	thbs4b (ENSAPEG00000020097) #13	ENSAPEG00000020192 #14	zgc:122979 (ENSAPEG00000020524) #15	hwa (ENSAPEG00000020540) #16	atp5fa1 (ENSAPEG00000020567) #17	zgc:77838 (ENSAPEG00000020629) #18	RNF165 (ENSAPEG00000020663) #19	LOXHD1 (ENSAPEG00000020703) #20	st8sia5 (ENSAPEG00000020803) #21	rpl37 (ENSAPEG00000020900) #22	PTGS1 (ENSAPEG00000020917) #23	pdcl (ENSAPEG00000020955) #24	rpl28 (ENSAPEG00000020972) #25	ENSAPEG00000020987 #26	ENSAPEG00000021030 #27	notch1a (ENSAPEG00000021342) #28	camsap1a (ENSAPEG00000021431) #29	KCNT1 (ENSAPEG00000021479) #30	psmd5 (ENSAPEG00000021521) #31	B3GALT9 (ENSAPEG00000021536) #32	ENSAPEG00000021550 #33	cdk5rap2 (ENSAPEG00000021595) #34	NUP188 (ENSAPEG00000021846) #35	dolk (ENSAPEG00000021930) #36	phyhd1 (ENSAPEG00000021937) #37
Clown anemonefish	MODERN SPECIES	1020								ENSAOCG00000019490 #14	zgc:122979 (ENSAOCG00000019527) #15	hwa (ENSAOCG00000019537) #16	atp5fa1 (ENSAOCG00000019574) #17	zgc:77838 (ENSAOCG00000019608) #18	RNF165 (ENSAOCG00000019627) #19	LOXHD1 (ENSAOCG00000019719) #20	st8sia5 (ENSAOCG00000019779) #21	rpl37 (ENSAOCG00000019804) #22	PTGS1 (ENSAOCG00000019827) #23	pdcl (ENSAOCG00000019840) #24	rpl28 (ENSAOCG00000019874) #25	ENSAOCG00000019884 #26	ENSAOCG00000019910 #27	notch1a (ENSAOCG00000020039) #28	camsap1a (ENSAOCG00000020074) #29	KCNT1 (ENSAOCG00000020284) #30	psmd5 (ENSAOCG00000020321) #31	B3GALT9 (ENSAOCG00000002752) #32	ENSAOCG00000020350 #33	cdk5rap2 (ENSAOCG00000020578) #34	kdm4c (ENSAOCG00000020617)	ecpas (ENSAOCG00000020767)	ENSAOCG00000002160
Tiger tail seahorse	MODERN SPECIES	265	coq4 (ENSHCOG00000003729)	ENSHCOG00000003712	fbxw5 (ENSHCOG00000003688)	prdm12b (ENSHCOG00000003663)	fubp3 (ENSHCOG00000003639)	ASS1 (ENSHCOG00000003559)	surf4 (ENSHCOG00000003528)	psmd5 (ENSHCOG00000003505) #31	timm10b (ENSHCOG00000003495)	st8sia5 (ENSHCOG00000003484) #21	ENSHCOG00000003464 #20	ENSHCOG00000003424	RNF165 (ENSHCOG00000003403) #19	zgc:77838 (ENSHCOG00000003384) #18	CAMSAP1 (ENSHCOG00000003358) #29	rpl37 (ENSHCOG00000003192) #22	ptgs1 (ENSHCOG00000000092) #23	pdcl (ENSHCOG00000003158) #24	ENSHCOG00000003153	rpl28 (ENSHCOG00000003134) #25	ENSHCOG00000003117	ENSHCOG00000003107 #27	ENSHCOG00000003085	notch1a (ENSHCOG00000003070) #28	atp5fa1 (ENSHCOG00000003031) #17
Pinecone sodierfish	MODERN SPECIES	3	psmd5 (ENSMMDG00005001982) #31	KCNT1 (ENSMMDG00005001404) #30	ENSMMDG00005001363 #29	ENSMMDG00005001360	ENSMMDG00005001356 #28	ENSMMDG00005001348 #28	ENSMMDG00005001340 #28	ENSMMDG00005001334 #28	ENSMMDG00005001329 #28	SEC16A (ENSMMDG00005001257) #27	ENSMMDG00005001229 #26	rpl28 (ENSMMDG00005001219) #25	pdcl (ENSMMDG00005001207) #24	ptgs1 (ENSMMDG00005001191) #23	ENSMMDG00005001184	rpl37 (ENSMMDG00005001165) #22	st8sia5 (ENSMMDG00005017273) #21	LOXHD1 (ENSMMDG00005017260) #20	RNF165 (ENSMMDG00005017252) #19	zgc:77838 (ENSMMDG00005017237) #18	atp5fa1 (ENSMMDG00005017102) #17	hwa (ENSMMDG00005017090) #16	zgc:122979 (ENSMMDG00005016924) #15	ENSMMDG00005016917 #14	thbs4b (ENSMMDG00005016916) #13	zgc:73226 (ENSMMDG00005016912) #12	ENSMMDG00005016908 #10	ENSMMDG00005016905	prune2 (ENSMMDG00005016902) #9	gna14 (ENSMMDG00005016818) #8	ENSMMDG00005016807 #7
Cod	MODERN SPECIES	10	paqr3b (ENSGMOG00000001789)	ENSGMOG00000001759	ENSGMOG00000025634	ENSGMOG00000030243	ENSGMOG00000036386	ENSGMOG00000022716	ENSGMOG00000008869	ENSGMOG00000027072	ENSGMOG00000027513	ENSGMOG00000034454 #15	ENSGMOG00000028287 #16	C18orf25 (ENSGMOG00000028549) #18	RNF165 (ENSGMOG00000017068) #19	LOXHD1 (ENSGMOG00000017024) #20	ST8SIA5 (ENSGMOG00000017008) #21	rpl37 (ENSGMOG00000016997) #22	ENSGMOG00000016986 #24	ENSGMOG00000027855	ENSGMOG00000015325 #25	ENSGMOG00000035073 #26	ENSGMOG00000016912 #27	ENSGMOG00000016873 #28	ENSGMOG00000022832 #29	ENSGMOG00000016593 #31	ENSGMOG00000029706	ENSGMOG00000016735 #30	ENSGMOG00000025145 #32	ENSGMOG00000034109 #33	cdk5rap2 (ENSGMOG00000016387) #34	ENSGMOG00000022660 ##34	ENSGMOG00000027526
Protacanthopterygii	DUPLICATION
Protacanthopterygii	DUPLICATION
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	17	ENSGT00940000157321	ENSGT00940000156290.b	ENSGT01070000253744.b.b.f	ENSGT00940000154821.a.a	ENSGT00940000154886.a.b	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00900000141071.b.d	ENSGT00550000074846.mb.a #17	ENSGT00390000006029	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254.c.a.a #22	ENSGT01080000257489	ENSGT00940000154290.b	ENSGT00940000167011.a	ENSGT00940000156317.w.a	ENSGT00940000161102	ENSGT01060000248847	ENSGT00900000140979.b	ENSGT00940000167350	ENSGT00940000158490	ENSGT00940000165439	ENSGT00390000011179	ENSGT00940000158444	ENSGT00940000158973.a.b	ENSGT00950000183125.b.a.a.a.a.a	ENSGT00390000003652.d
Salmoninae	ANCESTRAL SPECIES	78	ENSGT00940000157321.e.a	ENSGT00940000156290.b.d	ENSGT01070000253744.b.b.f.b	ENSGT00940000154821.a.a.e.a	ENSGT00940000154886.a.b	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b.c #15	ENSGT01000000214630 #16	ENSGT00900000141071.b.d.b	ENSGT00550000074846.mb.a.a #17	ENSGT00390000006029	ENSGT00390000016167.j #18	ENSGT00940000156997.b.a #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C.a #21	ENSGT00390000005254.c.a.a #22	ENSGT01080000257489.f	ENSGT00940000163461.a.a.a.b.c.b.b.b.b	ENSGT00940000154290.b.f	ENSGT00940000167011.a	ENSGT00940000156317.w.a.e	ENSGT00940000161102.h	ENSGT01060000248847.e	ENSGT00950000183162.a.b.j.a	ENSGT00900000140979.b	ENSGT00940000167350.f	ENSGT00940000158490	ENSGT00940000165439	ENSGT00390000011179.g	ENSGT00940000158444.i	ENSGT00940000158973.a.b.c.b
Huchen	MODERN SPECIES	896		ENSHHUG00000030164	ENSHHUG00000030166	ENSHHUG00000030169	ENSHHUG00000030186 #14	zgc:122979 (ENSHHUG00000030193) #15	vcp (ENSHHUG00000030200)	ENSHHUG00000030275	atp5fa1 (ENSHHUG00000030282) #17	haus1 (ENSHHUG00000030305)	zgc:77838 (ENSHHUG00000030360) #18	RNF165 (ENSHHUG00000000042) #19	ENSHHUG00000000056 #20	ENSHHUG00000000065 #20	st8sia5 (ENSHHUG00000000124) #21	rpl37 (ENSHHUG00000000137) #22	ENSHHUG00000000156	ENSHHUG00000000174	ENSHHUG00000005138	ENSHHUG00000005185
Salmoninae_a	ANCESTRAL SPECIES	7	ENSGT00940000157321.e.a	ENSGT00940000156290.b.d	ENSGT01070000253744.b.b.f.b	ENSGT00940000154821.a.a.e.a	ENSGT00940000154886.a.b	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b.c #15	ENSGT01000000214630.b #16	ENSGT00900000141071.b.d.b	ENSGT00550000074846.mb.a.a #17	ENSGT00390000006029	ENSGT00390000016167.j #18	ENSGT00940000156997.b.a #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C.a #21	ENSGT00390000005254.c.a.a #22	ENSGT01080000257489.f	ENSGT00940000163461.a.a.a.b.c.b.b.b.b	ENSGT00940000154290.b.f	ENSGT00940000167011.a	ENSGT00940000156317.w.a.e	ENSGT00940000161102.h	ENSGT01060000248847.e	ENSGT00950000183162.a.b.j.a	ENSGT00900000140979.b.b	ENSGT00940000167350.f	ENSGT00940000158490	ENSGT00940000165439	ENSGT00390000011179.g	ENSGT00940000158444.i	ENSGT00940000158973.a.b.c.b
Oncorhynchus	ANCESTRAL SPECIES	19	ENSGT00940000157321.e.a	ENSGT00940000156290.b.d	ENSGT01070000253744.b.b.f.b	ENSGT00940000154821.a.a.e.a	ENSGT00940000154886.a.b	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b.c #15	ENSGT01000000214630.b #16	ENSGT00900000141071.b.d.b	ENSGT00550000074846.mb.a.a #17	ENSGT00390000006029	ENSGT00390000016167.j #18	ENSGT00940000156997.b.a #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C.a #21	ENSGT00390000005254.c.a.a #22	ENSGT01080000257489.f	ENSGT00940000163461.a.a.a.b.c.b.b.b.b	ENSGT00940000154290.b.f	ENSGT00940000167011.a	ENSGT00940000156317.w.a.e	ENSGT00940000161102.h	ENSGT01060000248847.e	ENSGT00950000183162.a.b.j.a	ENSGT00900000140979.b.b	ENSGT00940000167350.f	ENSGT00940000158490	ENSGT00940000165439	ENSGT00940000158444.i	ENSGT00940000158973.a.b.c.b	ENSGT00950000183125.b.a.a.a.a.a.f
Rainbow trout	MODERN SPECIES	26	SLC4A4 (ENSOMYG00000040169)	NPFFR2 (ENSOMYG00000039927)	ENSOMYG00000053809	ENSOMYG00000039923	ENSOMYG00000039914	ENSOMYG00000039907 #14	ENSOMYG00000039905 #15	ENSOMYG00000039902 #16	ENSOMYG00000037945	atp5fa1 (ENSOMYG00000037593) #17	haus1 (ENSOMYG00000037541)	zgc:77838 (ENSOMYG00000037519) #18	RNF165 (ENSOMYG00000037497) #19	LOXHD1 (ENSOMYG00000037456) #20	ST8SIA5 (ENSOMYG00000037328) #21	rpl37 (ENSOMYG00000037290) #22	ENSOMYG00000028244	ENSOMYG00000026078	ENSOMYG00000025926	ENSOMYG00000076627	ENSOMYG00000058981	ENSOMYG00000058576	ENSOMYG00000049902	ENSOMYG00000025893	ENSOMYG00000025840	ENSOMYG00000025803	ENSOMYG00000025789	ENSOMYG00000071242	polm (ENSOMYG00000025652)	ENSOMYG00000025611	ENSOMYG00000025573
Oncorhynchus_a	ANCESTRAL SPECIES	12	ENSGT00940000157321.e.a	ENSGT00940000156290.b.d	ENSGT01070000253744.b.b.f.b	ENSGT00940000154821.a.a.e.a	ENSGT00940000154886.a.b	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b.c #15	ENSGT01000000214630.b #16	ENSGT00900000141071.b.d.b	ENSGT00550000074846.mb.a.a #17	ENSGT00390000006029	ENSGT00390000016167.j #18	ENSGT00940000156997.b.a #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C.a #21	ENSGT00390000005254.c.a.a #22	ENSGT01080000257489.f	ENSGT00940000163461.a.a.a.b.c.b.b.b.b	ENSGT00940000154290.b.f	ENSGT00940000167011.a	ENSGT00940000156317.w.a.e	ENSGT00940000161102.h	ENSGT01060000248847.e	ENSGT00950000183162.a.b.j.a	ENSGT00900000140979.b.b	ENSGT00940000167350.f	ENSGT00940000158490	ENSGT00940000165439	ENSGT00940000158444.i	ENSGT00940000158973.a.b.c.b	ENSGT00950000183125.b.a.a.a.a.a.f
Coho salmon	MODERN SPECIES	15	SLC4A4 (ENSOKIG00005034421)	NPFFR2 (ENSOKIG00005034757)	ENSOKIG00005034769	ENSOKIG00005034791	ENSOKIG00005034808	ENSOKIG00005034840 #14	zgc:122979 (ENSOKIG00005034942) #15	hwa (ENSOKIG00005034955) #16	VCP (ENSOKIG00005035117)	atp5fa1 (ENSOKIG00005037113) #17	haus1 (ENSOKIG00005037213)	zgc:77838 (ENSOKIG00005037328) #18	RNF165 (ENSOKIG00005037349) #19	LOXHD1 (ENSOKIG00005037390) #20	ST8SIA5 (ENSOKIG00005037795) #21	rpl37 (ENSOKIG00005037836) #22	ENSOKIG00005037864	ENSOKIG00005038606	ENSOKIG00005049068	ENSOKIG00005049229	CNNM4 (ENSOKIG00005049262)	ENSOKIG00005049335	PURB (ENSOKIG00005049338)	ENSOKIG00005049346	ved (ENSOKIG00005049352)	polm (ENSOKIG00005049357)	gnsb (ENSOKIG00005049371)	nudcd3 (ENSOKIG00005049416)	ENSOKIG00005049624	OGDH (ENSOKIG00005050184)	ENSOKIG00005050396
Salmo	ANCESTRAL SPECIES		ENSGT00940000157321.e.a	ENSGT00940000156290.b.d	ENSGT01070000253744.b.b.f.b	ENSGT00940000154821.a.a.e.a	ENSGT00940000154886.a.b	ENSGT00390000018729.a.f #14	ENSGT00940000156090.b.c #15	ENSGT01000000214630.b #16	ENSGT00900000141071.b.d.b	ENSGT00550000074846.mb.a.a #17	ENSGT00390000006029	ENSGT00390000016167.j #18	ENSGT00940000156997.b.a #19	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C.a #21	ENSGT00390000005254.c.a.a #22	ENSGT00940000163461.a.a.a.b.c.b.b.b.b	ENSGT00940000154290.b.f	ENSGT00940000167011.a	ENSGT00940000156317.w.a.e	ENSGT00940000161102.h	ENSGT00950000183162.a.b.j.a	ENSGT00900000140979.b.b	ENSGT00940000167350.f	ENSGT00940000158490	ENSGT00940000165439	ENSGT00390000011179.g	ENSGT00940000158444.i	ENSGT00940000158973.a.b.c.b	ENSGT00950000183125.b.a.a.a.a.a.f	ENSGT00390000003652.d
Atlantic salmon	MODERN SPECIES		DCK (ENSSSAG00000001721)	SLC4A4 (ENSSSAG00000001818)	ENSSSAG00000002614	NPFFR2 (ENSSSAG00000002602)	ENSSSAG00000002628	ENSSSAG00000002639 #14	ENSSSAG00000002660 #15	ENSSSAG00000107725 #16	ENSSSAG00000002698	ATPA (ENSSSAG00000002781) #17	haus1 (ENSSSAG00000002850)	zgc:77838 (ENSSSAG00000119651) #18	RNF165 (ENSSSAG00000002893) #19	LOXHD1 (ENSSSAG00000002953) #20	ST8SIA5 (ENSSSAG00000095774) #21	rpl37 (ENSSSAG00000003215) #22	ENSSSAG00000003651	ENSSSAG00000100685	ENSSSAG00000015691	ENSSSAG00000121259	ENSSSAG00000035592	ENSSSAG00000036024	purb (ENSSSAG00000113117)	h2az2b (ENSSSAG00000039042)	ved (ENSSSAG00000103886)	polm (ENSSSAG00000039392)	gnsb (ENSSSAG00000039467)	nudcd3 (ENSSSAG00000091881)	mrps24 (ENSSSAG00000119544)	ENSSSAG00000107947	OGDH (ENSSSAG00000043149)
Northern pike	MODERN SPECIES	13	dck (ENSELUG00000002787)	SLC4A4 (ENSELUG00000002753)	NPFFR2 (ENSELUG00000002622)	ENSELUG00000000069	ENSELUG00000002592	ENSELUG00000002574 #14	zgc:122979 (ENSELUG00000002557) #15	hwa (ENSELUG00000001275) #16	vcp (ENSELUG00000002541)	atp5fa1 (ENSELUG00000002526) #17	haus1 (ENSELUG00000002516)	zgc:77838 (ENSELUG00000002487) #18	RNF165 (ENSELUG00000002469) #19	LOXHD1 (ENSELUG00000002422) #20	st8sia5 (ENSELUG00000024561) #21	rpl37 (ENSELUG00000024481) #22	ENSELUG00000024465	ENSELUG00000024412	ENSELUG00000024396	CNNM4 (ENSELUG00000024299)	ENSELUG00000024220	ENSELUG00000024202	PURB (ENSELUG00000024165)	h2az2b (ENSELUG00000024156)	ved (ENSELUG00000024130)	polm (ENSELUG00000024125)	gnsb (ENSELUG00000024113)	mrps24 (ENSELUG00000023900)	nudcd3 (ENSELUG00000024088)	CAMK2B (ENSELUG00000023881)	OGDH (ENSELUG00000023799)
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00390000005254.c.a.b #22
Salmoninae	ANCESTRAL SPECIES	118	ENSGT00940000157140.b.a.b.b.c	ENSGT00390000004161	ENSGT00940000157105.d.a	ENSGT00940000155389.x	ENSGT01050000244898.b.b.a	ENSGT00940000157321.e.b	ENSGT00940000156290.b.c	ENSGT01070000253744.b.b.f.a	ENSGT00940000154821.a.a.e.b	ENSGT00940000156090.b.d #15	ENSGT00550000074846.lb #17	ENSGT00390000016167.i #18	ENSGT00940000156997.b.b #19	ENSGT00390000018830.b ##20	ENSGT01030000234535.C.b #21	ENSGT00390000005254.c.a.b #22	ENSGT01080000257489.e	ENSGT00940000154290.b.e	ENSGT00940000167011.b	ENSGT00940000156317.w.a.f	ENSGT00940000161102.g	ENSGT00950000182943.o	ENSGT00950000183162.a.b.j.b	ENSGT00940000167350.e	ENSGT00940000156921.h	ENSGT00390000011179.h	ENSGT00940000158444.j	ENSGT00940000158973.a.b.c.a	ENSGT00950000183125.b.a.a.a.a.a.e	ENSGT01030000234539.b.b.a.i.m.b	ENSGT00940000165894.b.d
Huchen	MODERN SPECIES	2025															st8sia5 (ENSHHUG00000026786) #21	rpl37 (ENSHHUG00000026835) #22	ENSHHUG00000026856	ENSHHUG00000026860	ENSHHUG00000026864	CNNM4 (ENSHHUG00000026876)	CNNM3 (ENSHHUG00000026885)	ENSHHUG00000026896
Salmoninae_a	ANCESTRAL SPECIES	80	ENSGT00390000004161.g	ENSGT00940000157105.d.a	ENSGT00940000155389.x	ENSGT01050000244898.b.b.a	ENSGT00940000157321.e.b	ENSGT00940000156290.b.c	ENSGT01070000253744.b.b.f.a	ENSGT00940000154821.a.a.e.b	ENSGT00940000156090.b.d #15	ENSGT01000000214630.a #16	ENSGT00900000141071.b.d.a	ENSGT00550000074846.mb.a.b #17	ENSGT00390000016167.i #18	ENSGT00940000156997.b.b #19	ENSGT01030000234535.C.b #21	ENSGT00390000005254.c.a.b #22	ENSGT01080000257489.e	ENSGT00940000154290.b.e	ENSGT00940000167011.b	ENSGT00940000156317.w.a.f	ENSGT00940000161102.g	ENSGT00950000182943.o	ENSGT00950000183162.a.b.j.b	ENSGT00940000167350.e	ENSGT00940000156921.h	ENSGT00390000011179.h	ENSGT00940000158444.j	ENSGT00940000158973.a.b.c.a	ENSGT00950000183125.b.a.a.a.a.a.e	ENSGT01030000234539.b.b.a.i.m.b	ENSGT00940000165894.b.d
Salmo	ANCESTRAL SPECIES	1	ENSGT00390000004161.g	ENSGT00940000157105.d.a	ENSGT00940000155389.x	ENSGT01050000244898.b.b.a	ENSGT00940000157321.e.b	ENSGT00940000156290.b.c	ENSGT01070000253744.b.b.f.a	ENSGT00940000154821.a.a.e.b	ENSGT00940000156090.b.d #15	ENSGT01000000214630.a #16	ENSGT00900000141071.b.d.a	ENSGT00550000074846.mb.a.b #17	ENSGT00390000016167.i #18	ENSGT00940000156997.b.b #19	ENSGT01030000234535.C.b #21	ENSGT00390000005254.c.a.b #22	ENSGT01080000257489.e	ENSGT00940000154290.b.e	ENSGT00940000167011.b	ENSGT00940000156317.w.a.f	ENSGT00940000161102.g	ENSGT00950000182943.o	ENSGT00950000183162.a.b.j.b	ENSGT00940000167350.e	ENSGT00940000156921.h	ENSGT00390000011179.h	ENSGT00940000158973.a.b.c.a	ENSGT00950000183125.b.a.a.a.a.a.e	ENSGT01030000234539.b.b.a.i.m.b	ENSGT00940000165894.b.c.a	ENSGT00930000151016.bb
Atlantic salmon	MODERN SPECIES	2	TMEM174 (ENSSSAG00000069497)	fcho2 (ENSSSAG00000000898)	TNPO1 (ENSSSAG00000068062)	MOB1B (ENSSSAG00000100755)	DCK (ENSSSAG00000068041)	SLC4A4 (ENSSSAG00000067184)	NPFFR2 (ENSSSAG00000034609)	ENSSSAG00000067132	ENSSSAG00000067134 #15	ENSSSAG00000104832 #16	ENSSSAG00000063064	atp5fa1 (ENSSSAG00000061907) #17	C18orf25 (ENSSSAG00000061825) #18	RNF165 (ENSSSAG00000121000) #19	ST8SIA5 (ENSSSAG00000098370) #21	RL37 (ENSSSAG00000061468) #22	ENSSSAG00000109975	CXL10 (ENSSSAG00000061390)	ENSSSAG00000107205	ENSSSAG00000061191	ENSSSAG00000061150	ENSSSAG00000061123	cnnm3 (ENSSSAG00000061036)	IL-1b3 (ENSSSAG00000060993)	ENSSSAG00000039327	ENSSSAG00000118660	ENSSSAG00000112305	ENSSSAG00000005164	ENSSSAG00000047952	ENSSSAG00000009471	OGDH (ENSSSAG00000007455)
Protacanthopterygii	ANCESTRAL SPECIES	102	ENSGT00940000158323.h	ENSGT00390000009488	ENSGT00940000155477	ENSGT00940000164321.c	ENSGT00730000111133.w	ENSGT00940000158936	ENSGT00940000158107.a.b	ENSGT00490000043388.a	ENSGT00940000159152.d.j.b	ENSGT01050000244968.c.d	ENSGT00940000156730.a	ENSGT00550000074846.mb.b #17	ENSGT00940000156997.a ##19	ENSGT00390000018830.a.a ##20	ENSGT00940000165146	ENSGT00390000005254.c.b #22	ENSGT01050000244902.a.a.a.a.a.b	ENSGT00390000007246	ENSGT00940000155498	ENSGT00390000004511.c.b.c	ENSGT00940000156114.d	ENSGT00940000154078.b.b	ENSGT00510000049555	ENSGT00390000004511.c.a.a	ENSGT01010000222762.a	ENSGT00940000160237	ENSGT00670000098074	ENSGT00520000055591.b	ENSGT00940000157299.d	ENSGT00950000182964.a.b.a.a.b.e	ENSGT00950000182964.a.b.a.a.b.f
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	315	ENSGT00390000015164.bb.b	ENSGT00390000006780	ENSGT00940000158323.h.l	ENSGT00390000009488.d	ENSGT00940000155477.g	ENSGT00940000164321.c.h	ENSGT00730000111133.w.b	ENSGT00940000158936.e	ENSGT00940000158107.a.b	ENSGT00490000043388.a.e	ENSGT00940000159152.d.j.b	ENSGT01050000244968.c.d	ENSGT00940000156730.a.d	ENSGT00550000074846.mb.b.b #17	ENSGT00940000156997.a.f ##19	ENSGT00390000005254.c.b.a #22	ENSGT01050000244902.a.a.a.a.a.b.f
Huchen	MODERN SPECIES	2248			ENSHHUG00000042287	ENSHHUG00000042296	star (ENSHHUG00000042309)	ENSHHUG00000042583	lsm1 (ENSHHUG00000042622)	bag4 (ENSHHUG00000042629)	DUSP26 (ENSHHUG00000042635)	ENSHHUG00000042648	RNF122 (ENSHHUG00000042658)	ENSHHUG00000042666	PLPP1 (ENSHHUG00000042687)	atp5fa1 (ENSHHUG00000042702) #17	RNF165 (ENSHHUG00000043190) ##19	rpl37 (ENSHHUG00000043201) #22	ptger4a (ENSHHUG00000043205)
Salmoninae_a	ANCESTRAL SPECIES	31	ENSGT00390000015164.bb.b	ENSGT00390000006780	ENSGT00940000158323.h.l	ENSGT00390000009488.d	ENSGT00940000155477.g	ENSGT00940000164321.c.h	ENSGT00730000111133.w.b	ENSGT00940000158936.e	ENSGT00940000158107.a.b	ENSGT00490000043388.a.e	ENSGT00940000159152.d.j.b	ENSGT01050000244968.c.d	ENSGT00940000156730.a.d	ENSGT00550000074846.mb.b.b #17	ENSGT00940000156997.a.f ##19	ENSGT00390000005254.c.b.a #22	ENSGT01050000244902.a.a.a.a.a.b.f	ENSGT00390000007246.i	ENSGT00940000155498.f.b	ENSGT00390000004511.c.b.c.a	ENSGT00940000156114.d	ENSGT00940000154078.b.b.d	ENSGT00940000165543.h	ENSGT00940000160343.d	ENSGT00950000182964.a.b.a.a.a.d	ENSGT01080000257756.b	ENSGT00940000157299.c.f	ENSGT00940000179359.b
Salmo	ANCESTRAL SPECIES	19	ENSGT00390000015164.bb.b	ENSGT00390000006780	ENSGT00940000158323.h.l	ENSGT00390000009488.d	ENSGT00940000155477.g	ENSGT00940000164321.c.h	ENSGT00730000111133.w.b	ENSGT00940000158936.e	ENSGT00940000158107.a.b	ENSGT00490000043388.a.e	ENSGT00940000159152.d.j.b	ENSGT01050000244968.c.d	ENSGT00940000156730.a.d	ENSGT00550000074846.mb.b.b #17	ENSGT00940000156997.a.f ##19	ENSGT00390000005254.c.b.a #22	ENSGT01050000244902.a.a.a.a.a.b.f	ENSGT00390000007246.i	ENSGT00940000155498.f.b	ENSGT00390000004511.c.b.c.a	ENSGT00940000156114.d	ENSGT00940000154078.b.b.d	ENSGT00940000165543.h	ENSGT00940000160343.d	ENSGT00950000182964.a.b.a.a.a.d	ENSGT01080000257756.b	ENSGT00390000002172.B.a.a.b	ENSGT00940000157299.c.f	ENSGT00940000156973.z	ENSGT00510000048363	ENSGT00940000155899.f.a
Atlantic salmon	MODERN SPECIES	12	pold2 (ENSSSAG00000074050)	ENSSSAG00000086039	ENSSSAG00000074092	star (ENSSSAG00000074097)	ENSSSAG00000074132	lsm1 (ENSSSAG00000074566)	bag4 (ENSSSAG00000085578)	ENSSSAG00000074573	ENSSSAG00000074579	ENSSSAG00000112259	ENSSSAG00000059101	ENSSSAG00000074591	ENSSSAG00000086212	ENSSSAG00000074629 #17	ENSSSAG00000104912 ##19	RL37 (ENSSSAG00000074883) #22	ptger4a (ENSSSAG00000116650)	ENSSSAG00000074892	ENSSSAG00000074911	ENSSSAG00000074930	smyd1b (ENSSSAG00000074939)	ENSSSAG00000074978	ENSSSAG00000085275	ENSSSAG00000074981	ga45g (ENSSSAG00000074990)	ENSSSAG00000074995	ENSSSAG00000074997	ENSSSAG00000117984	ENSSSAG00000117711	efna5b (ENSSSAG00000081531)	ENSSSAG00000075026
River trout	MODERN SPECIES	39	YKT6 (ENSSTUG00000028077)	pold2 (ENSSTUG00000028097)	AEBP1 (ENSSTUG00000028168)	ELMOD3 (ENSSTUG00000028216)	star (ENSSTUG00000028236)	ENSSTUG00000028275	lsm1 (ENSSTUG00000028860)	bag4 (ENSSTUG00000028877)	DUSP26 (ENSSTUG00000028885)	ENSSTUG00000028900	RNF122 (ENSSTUG00000028953)	ENSSTUG00000028961	ENSSTUG00000028990	atp5fa1 (ENSSTUG00000029001) #17	RNF165 (ENSSTUG00000029167) ##19	rpl37 (ENSSTUG00000029177) #22	ptger4a (ENSSTUG00000029208)	mrps27 (ENSSTUG00000029213)	ZNF366 (ENSSTUG00000029222)	oxt (ENSSTUG00000029280)	smyd1b (ENSSTUG00000029303)	LZTS3 (ENSSTUG00000029433)	ENSSTUG00000029456	creb3l3l (ENSSTUG00000029460)	gadd45ga (ENSSTUG00000015655)	ENSSTUG00000016010	ENSSTUG00000016034	efna5b (ENSSTUG00000016066)	ENSSTUG00000016135	PRXL2C (ENSSTUG00000016157)	ENSSTUG00000016176
Oncorhynchus	ANCESTRAL SPECIES	12	ENSGT00390000015164.bb.b	ENSGT00390000006780	ENSGT00940000158323.h.l	ENSGT00390000009488.d	ENSGT00940000155477.g	ENSGT00940000164321.c.h	ENSGT00730000111133.w.b	ENSGT00940000158936.e	ENSGT00940000158107.a.b	ENSGT00490000043388.a.e	ENSGT00940000159152.d.j.b	ENSGT01050000244968.c.d	ENSGT00940000156730.a.d	ENSGT00550000074846.mb.b.b.a.a #17	ENSGT00940000156997.a.f ##19	ENSGT00390000005254.c.b.a #22	ENSGT01050000244902.a.a.a.a.a.b.f	ENSGT00950000185750	ENSGT00940000155498.f.b	ENSGT00390000004511.c.b.c.a	ENSGT00940000156114.d	ENSGT00940000154078.b.b.d	ENSGT00940000165543.h	ENSGT00940000160343.d	ENSGT00950000182964.a.b.a.a.a.d	ENSGT01080000257756.b	ENSGT00940000157299.c.f	ENSGT00940000179359.b	ENSGT00510000048363	ENSGT00940000155899.f.a	ENSGT00520000055591.b.d
Rainbow trout	MODERN SPECIES	2	ENSOMYG00000018755	ENSOMYG00000018796	star (ENSOMYG00000061703)	ENSOMYG00000022324	ENSOMYG00000018823	lsm1 (ENSOMYG00000018837)	bag4 (ENSOMYG00000018847)	ENSOMYG00000018849	ENSOMYG00000018868	ENSOMYG00000018899	ENSOMYG00000018911	ENSOMYG00000018943	ENSOMYG00000019010 #17	ENSOMYG00000053341 #17	ENSOMYG00000019088 ##19	ENSOMYG00000019105 #22	ENSOMYG00000067799	ENSOMYG00000019109	ENSOMYG00000040202	ENSOMYG00000019290	ENSOMYG00000019360	ENSOMYG00000019374	ENSOMYG00000019390	gadd45ga (ENSOMYG00000019408)	ENSOMYG00000061178	efna5b (ENSOMYG00000019435)	ENSOMYG00000019445	ENSOMYG00000051359	prxl2c (ENSOMYG00000019471)	ENSOMYG00000019502	ENSOMYG00000058833
Oncorhynchus_a	ANCESTRAL SPECIES	15	ENSGT00950000182787.E.d.e.b.g	ENSGT00390000015164.bb.b	ENSGT00390000006780	ENSGT00940000158323.h.l	ENSGT00390000009488.d	ENSGT00940000164321.c.h	ENSGT00730000111133.w.b	ENSGT00940000158936.e	ENSGT00940000158107.a.b	ENSGT00490000043388.a.e	ENSGT00940000159152.d.j.b	ENSGT01050000244968.c.d	ENSGT00940000156730.a.d	ENSGT00550000074846.mb.b.b.a.a #17	ENSGT00940000156997.a.f ##19	ENSGT00390000005254.c.b.a #22	ENSGT01050000244902.a.a.a.a.a.b.f	ENSGT00950000185750	ENSGT00940000155498.f.b	ENSGT00390000004511.c.b.c.a	ENSGT00940000156114.d	ENSGT00940000154078.b.b.d	ENSGT00940000165543.h	ENSGT00940000160343.d	ENSGT00950000182964.a.b.a.a.a.d	ENSGT01080000257756.b	ENSGT00990000212678.b.a	ENSGT00940000157299.c.f	ENSGT00510000048363	ENSGT00940000155899.f.a	ENSGT00520000055591.b.d
Coho salmon	MODERN SPECIES	28	YKT6 (ENSOKIG00005041266)	pold2 (ENSOKIG00005041189)	ENSOKIG00005041172	ELMOD3 (ENSOKIG00005041120)	ENSOKIG00005041043	lsm1 (ENSOKIG00005041009)	bag4 (ENSOKIG00005041005)	ENSOKIG00005040971	DUSP26 (ENSOKIG00005040960)	ENSOKIG00005040860	RNF122 (ENSOKIG00005040732)	ENSOKIG00005040522	ENSOKIG00005040496	ATP5F1A (ENSOKIG00005039491) #17	RNF165 (ENSOKIG00005039369) ##19	RPL37 (ENSOKIG00005039355) #22	ptger4a (ENSOKIG00005039345)	ENSOKIG00005039334	ENSOKIG00005039304	ZNF366 (ENSOKIG00005039262)	ENSOKIG00005039234	smyd1b (ENSOKIG00005039072)	LZTS3 (ENSOKIG00005039035)	ENSOKIG00005039014	ENSOKIG00005039000	gadd45ga (ENSOKIG00005038979)	ENSOKIG00005038949	ENSOKIG00005038943	ENSOKIG00005038921	ENSOKIG00005038915	efna5b (ENSOKIG00005038906)
Chinook salmon	MODERN SPECIES	3	YKT6 (ENSOTSG00005027890)	pold2 (ENSOTSG00005027888)	AEBP1 (ENSOTSG00005027885)	ELMOD3 (ENSOTSG00005018979)	ENSOTSG00005018977	lsm1 (ENSOTSG00005018976)	bag4 (ENSOTSG00005018975)	DUSP26 (ENSOTSG00005018974)	ENSOTSG00005018973	RNF122 (ENSOTSG00005018971)	ENSOTSG00005018970	ENSOTSG00005018964	ENSOTSG00005018963	atp5fa1 (ENSOTSG00005018541) #17	RNF165 (ENSOTSG00005018537) ##19	rpl37 (ENSOTSG00005018536) #22	ptger4a (ENSOTSG00005018535)	ENSOTSG00005018533	ENSOTSG00005018530	ZNF366 (ENSOTSG00005018527)	oxt (ENSOTSG00005018523)	smyd1b (ENSOTSG00005018384)	LZTS3 (ENSOTSG00005018381)	ENSOTSG00005018379	creb3l3l (ENSOTSG00005018376)	gadd45ga (ENSOTSG00005018373)	ENSOTSG00005018371	ENSOTSG00005018369	efna5b (ENSOTSG00005018367)	PRXL2C (ENSOTSG00005018363)	ENSOTSG00005018360
Salmoninae	ANCESTRAL SPECIES	37	ENSGT00950000182787.E.d.e.b.h	ENSGT00390000015164.bb.a	ENSGT00940000159904	ENSGT00940000158323.h.k	ENSGT00390000009488.c	ENSGT00940000155477.h	ENSGT00940000164321.c.g	ENSGT00730000111133.w.a	ENSGT00940000158936.f	ENSGT00490000043388.a.f	ENSGT00940000159152.d.j.a	ENSGT00940000156730.a.c	ENSGT00550000074846.mb.b.a #17	ENSGT00940000156997.a.e ##19	ENSGT00390000018830.a.a ##20	ENSGT00390000005254.c.b.b #22	ENSGT01050000244902.a.a.a.a.a.b.e	ENSGT00390000007246.j	ENSGT00940000155498.f.a	ENSGT00390000004511.c.b.c.b	ENSGT00940000155135.w.b	ENSGT00940000154078.b.b.c	ENSGT00510000049555.e	ENSGT00390000004511.c.a.a	ENSGT01010000222762.a.a	ENSGT00940000160237.a	ENSGT00670000098074.g	ENSGT00940000155950
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00390000005254.c.b.b #22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00390000005254.c.b.b #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00390000005254.c.b.b #22
Coho salmon	MODERN SPECIES	22	myl7 (ENSOKIG00005016595)	gck (ENSOKIG00005016659)	YKT6 (ENSOKIG00005016913)	NPC1L1 (ENSOKIG00005017077)	ENSOKIG00005019898	ELMOD3 (ENSOKIG00005019932)	ENSOKIG00005019969	ENSOKIG00005020514	lsm1 (ENSOKIG00005020519)	bag4 (ENSOKIG00005020535)	ENSOKIG00005020545	ENSOKIG00005020566	ATP5F1A (ENSOKIG00005020591) #17	RNF165 (ENSOKIG00005020790) ##19	LOXHD1 (ENSOKIG00005020822) ##20	ENSOKIG00005021045 #22	ptger4a (ENSOKIG00005021072)	mrps27 (ENSOKIG00005021084)	ZNF366 (ENSOKIG00005021188)	ENSOKIG00005021210	FABP1 (ENSOKIG00005021232)	FABP1 (ENSOKIG00005021281)	LZTS3 (ENSOKIG00005021314)	ubox5 (ENSOKIG00005021334)	avp (ENSOKIG00005021373)	ENSOKIG00005021384	SLC35D2 (ENSOKIG00005021402)	znf367 (ENSOKIG00005021453)	ENSOKIG00005021493	FBXL17 (ENSOKIG00005021683)	EFNA5 (ENSOKIG00005021749)
Salmo	ANCESTRAL SPECIES																	ENSGT00390000005254.c.b.b #22
River trout	MODERN SPECIES	19	gck (ENSSTUG00000028305)	YKT6 (ENSSTUG00000028282)	NPC1L1 (ENSSTUG00000023727)	AEBP1 (ENSSTUG00000023548)	AEBP1 (ENSSTUG00000023503)	ELMOD3 (ENSSTUG00000023475)	star (ENSSTUG00000023455)	ENSSTUG00000023332	lsm1 (ENSSTUG00000023306)	bag4 (ENSSTUG00000023297)	RNF122 (ENSSTUG00000023291)	ENSSTUG00000023280	atp5fa1 (ENSSTUG00000021824) #17	RNF165 (ENSSTUG00000021753) ##19	LOXHD1 (ENSSTUG00000021308) ##20	rpl37 (ENSSTUG00000021262) #22	ptger4a (ENSSTUG00000021259)	mrps27 (ENSSTUG00000021230)	ZNF366 (ENSSTUG00000021211)	oxt (ENSSTUG00000021204)	FABP1 (ENSSTUG00000021152)	FABP1 (ENSSTUG00000021102)	ENSSTUG00000021086	LZTS3 (ENSSTUG00000021076)	ubox5 (ENSSTUG00000021062)	avp (ENSSTUG00000021052)	ENSSTUG00000021038	SLC35D2 (ENSSTUG00000021012)	znf367 (ENSSTUG00000020998)	ENSSTUG00000020820	FBXL17 (ENSSTUG00000020739)
Huchen	MODERN SPECIES	213	YKT6 (ENSHHUG00000005821)	NPC1L1 (ENSHHUG00000005877)	ENSHHUG00000006785	ELMOD3 (ENSHHUG00000006820)	star (ENSHHUG00000006835)	ENSHHUG00000006880	lsm1 (ENSHHUG00000006919)	bag4 (ENSHHUG00000006925)	ENSHHUG00000006940	RNF122 (ENSHHUG00000006953)	ENSHHUG00000006964	atp5fa1 (ENSHHUG00000006983) #17	RNF165 (ENSHHUG00000007320) ##19	ENSHHUG00000007328 ##20	ENSHHUG00000007379	rpl37 (ENSHHUG00000007381) #22	ptger4a (ENSHHUG00000007429)	mrps27 (ENSHHUG00000007435)	ZNF366 (ENSHHUG00000007456)	oxt (ENSHHUG00000007505)	FABP1 (ENSHHUG00000007511)	ENSHHUG00000007545
Northern pike	MODERN SPECIES	12	ENSELUG00000029031	ercc6l2 (ENSELUG00000002272)	hsd17b3 (ENSELUG00000002287)	star (ENSELUG00000002291)	ENSELUG00000002312	lsm1 (ENSELUG00000002322)	bag4 (ENSELUG00000002331)	DUSP26 (ENSELUG00000002325)	ENSELUG00000002335	RNF122 (ENSELUG00000002338)	ENSELUG00000002345	PLPP1 (ENSELUG00000002355)	atp5fa1 (ENSELUG00000002365) #17	RNF165 (ENSELUG00000002377) ##19	LOXHD1 (ENSELUG00000002386) ##20	RL37 (ENSELUG00000034681) #22	ptger4a (ENSELUG00000002394)	mrps27 (ENSELUG00000002400)	ZNF366 (ENSELUG00000002403)	oxt (ENSELUG00000002407)	smyd1b (ENSELUG00000002415)	LZTS3 (ENSELUG00000002420)	ENSELUG00000002427	creb3l3l (ENSELUG00000002440)	gadd45g (ENSELUG00000002447)	EFNA5 (ENSELUG00000002457)	FBXL17 (ENSELUG00000002467)	ENSELUG00000029469	prxl2c (ENSELUG00000002485)	cdc14b (ENSELUG00000002536)	znf367 (ENSELUG00000002552)
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00390000005254.d #22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00390000005254.d #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00390000005254.d #22
Oncorhynchus	ANCESTRAL SPECIES	18	ENSGT00940000157140.b.a.b.b.c	ENSGT00390000004161.g	ENSGT00940000157105.d.a	ENSGT00940000155389.x	ENSGT01050000244898.b.b.a	ENSGT00940000157321.e.b	ENSGT00940000156290.b.c	ENSGT01070000253744.b.b.f.a	ENSGT00940000154821.a.a.e.b	ENSGT00940000156090.b.d #15	ENSGT01000000214630.a #16	ENSGT00900000141071.b.d.a	ENSGT00390000016167.i #18	ENSGT00940000156997.b.b #19	ENSGT01030000234535.C.b #21	ENSGT00390000005254.d #22
Oncorhynchus_a	ANCESTRAL SPECIES	47	ENSGT00940000157140.b.a.b.b.c	ENSGT00390000004161.g	ENSGT00940000157105.d.a	ENSGT00940000155389.x	ENSGT01050000244898.b.b.a	ENSGT00940000157321.e.b	ENSGT00940000156290.b.c	ENSGT01070000253744.b.b.f.a	ENSGT00940000154821.a.a.e.b	ENSGT00940000156090.b.d #15	ENSGT01000000214630.a #16	ENSGT00900000141071.b.d.a	ENSGT00390000016167.i #18	ENSGT00940000156997.b.b #19	ENSGT01030000234535.C.b #21	ENSGT00390000005254.d #22
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	26	foxd1 (ENSOTSG00005024694)	TMEM174 (ENSOTSG00005024696)	fcho2 (ENSOTSG00005024700)	TNPO1 (ENSOTSG00005027517)	MOB1B (ENSOTSG00005028267)	dck (ENSOTSG00005028395)	SLC4A4 (ENSOTSG00005028448)	NPFFR2 (ENSOTSG00005039750)	ENSOTSG00005039766	zgc:122979 (ENSOTSG00005039767) #15	hwa (ENSOTSG00005039768) #16	vcp (ENSOTSG00005039772)	zgc:77838 (ENSOTSG00005039830) #18	RNF165 (ENSOTSG00005039832) #19	st8sia5 (ENSOTSG00005039835) #21	rpl37 (ENSOTSG00005039836) #22	ENSOTSG00005039846	NSMF (ENSOTSG00005039849)	zgc:113162 (ENSOTSG00005039850)	ENSOTSG00005039852	ENSOTSG00005039853	ADORA2A (ENSOTSG00005039855)	SPECC1L (ENSOTSG00005039858)	BCR (ENSOTSG00005039880)	ENSOTSG00005043229	pus1 (ENSOTSG00005045709)	noc4l (ENSOTSG00005045713)	vps29 (ENSOTSG00005045714)	vps29 (ENSOTSG00005045716)	gpn3 (ENSOTSG00005045719)	arpc3 (ENSOTSG00005045720)
Chinook salmon	MODERN SPECIES	12	MOB1B (ENSOTSG00005036446)	dck (ENSOTSG00005036445)	SLC4A4 (ENSOTSG00005032168)	NPFFR2 (ENSOTSG00005032160)	ENSOTSG00005032159	ENSOTSG00005032157 #14	zgc:122979 (ENSOTSG00005032156) #15	hwa (ENSOTSG00005032155) #16	vcp (ENSOTSG00005030302)	atp5fa1 (ENSOTSG00005029651) #17	haus1 (ENSOTSG00005029648)	zgc:77838 (ENSOTSG00005029647) #18	RNF165 (ENSOTSG00005029646) #19	LOXHD1 (ENSOTSG00005029645) #20	st8sia5 (ENSOTSG00005029642) #21	rpl37 (ENSOTSG00005029640) #22	ENSOTSG00005029639	ENSOTSG00005013173	ENSOTSG00005012768	ENSOTSG00005012761	CNNM4 (ENSOTSG00005012760)	ENSOTSG00005023664	ENSOTSG00005023661	ENSOTSG00005023657	ENSOTSG00005023654	SH2D4A (ENSOTSG00005023652)	slc38a9 (ENSOTSG00005022506)	ddx4 (ENSOTSG00005018312)	ENSOTSG00005018273	il6st (ENSOTSG00005018268)	ANKRD55 (ENSOTSG00005018164)
Rainbow trout	MODERN SPECIES	364	foxd1 (ENSOMYG00000037563)	TMEM174 (ENSOMYG00000037558)	ENSOMYG00000036506	FCHO2 (ENSOMYG00000069297)	TNPO1 (ENSOMYG00000035081)	MOB1B (ENSOMYG00000034906)	DCK (ENSOMYG00000034882)	SLC4A4 (ENSOMYG00000034651)	NPFFR2 (ENSOMYG00000034453)	ENSOMYG00000034446	ENSOMYG00000034435 #15	ENSOMYG00000034424 #16	C18orf25 (ENSOMYG00000034406) #18	ENSOMYG00000034366 #19	ST8SIA5 (ENSOMYG00000034302) #21	ENSOMYG00000057258 #22	ENSOMYG00000056085	ENSOMYG00000054492	ENSOMYG00000067853	ENSOMYG00000076326	ENSOMYG00000031753	ENSOMYG00000049821	ENSOMYG00000071258	ENSOMYG00000067890	sdy (ENSOMYG00000068768)	ENSOMYG00000017222	ENSOMYG00000038603	ENSOMYG00000054442	ENSOMYG00000074455	ENSOMYG00000026520	ENSOMYG00000026389
Salmo	ANCESTRAL SPECIES																	ENSGT00390000005254.d #22
River trout	MODERN SPECIES	3	fcho2 (ENSSTUG00000019513)	TNPO1 (ENSSTUG00000019248)	MOB1B (ENSSTUG00000019143)	dck (ENSSTUG00000019125)	ENSSTUG00000019120	SLC4A4 (ENSSTUG00000016091)	NPFFR2 (ENSSTUG00000015842)	zgc:122979 (ENSSTUG00000015838) #15	ENSSTUG00000015826	hwa (ENSSTUG00000015819) #16	vcp (ENSSTUG00000014383)	atp5fa1 (ENSSTUG00000014277) #17	zgc:77838 (ENSSTUG00000014266) #18	RNF165 (ENSSTUG00000014249) #19	st8sia5 (ENSSTUG00000014209) #21	rpl37 (ENSSTUG00000014178) #22	ENSSTUG00000014169	ENSSTUG00000013884	CNNM4 (ENSSTUG00000013836)	ENSSTUG00000013763	il1b (ENSSTUG00000013720)	PURB (ENSSTUG00000013715)	h2az2b (ENSSTUG00000013663)	ved (ENSSTUG00000013629)	ece2b (ENSSTUG00000010008)	mrps24 (ENSSTUG00000009834)	CAMK2B (ENSSTUG00000009551)	OGDH (ENSSTUG00000009049)	ZMIZ2 (ENSSTUG00000008944)	ppiab (ENSSTUG00000008907)	RNF122 (ENSSTUG00000008894)
Otomorpha	ANCESTRAL SPECIES	396														ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00980000199895	ENSGT00940000159324 #27	ENSGT00940000156997.b #19	ENSGT00390000016167 #18	ENSGT00390000006029	ENSGT00550000074846 #17	ENSGT01000000214630 #16	ENSGT00940000156090.b #15	ENSGT00940000155227.a #13
Clupeiformes	ANCESTRAL SPECIES	362														ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00940000159569 #24	ENSGT00390000008732.b #25	ENSGT00980000199895	ENSGT00940000159324 #27	ENSGT00940000156997.b #19	ENSGT00390000016167 #18	ENSGT00390000006029	ENSGT00550000074846 #17	ENSGT01000000214630 #16	ENSGT00940000156090.b #15	ENSGT00940000155227.a #13
Atlantic herring	MODERN SPECIES	3	med22 (ENSCHAG00000022804)	zgc:103692 (ENSCHAG00000022825)	usp20 (ENSCHAG00000022910)	ptges (ENSCHAG00000023799)	thbs4b (ENSCHAG00000023900) #13	zgc:122979 (ENSCHAG00000025640) #15	hwa (ENSCHAG00000025643) #16	ENSCHAG00000025652 #27	ENSCHAG00000025721 #20	tor1 (ENSCHAG00000025847)	nsa2 (ENSCHAG00000025862)	spout1 (ENSCHAG00000025865)	ENSCHAG00000025891	rpl28 (ENSCHAG00000025897) #25	pdcl (ENSCHAG00000025906) #24	rpl37 (ENSCHAG00000025911) #22	st8sia5 (ENSCHAG00000025920) #21	ENSCHAG00000025936 #20	LOXHD1 (ENSCHAG00000025959) ##20	zgc:77838 (ENSCHAG00000025971) #18	ENSCHAG00000025974	spout1 (ENSCHAG00000025977)	nsa2 (ENSCHAG00000025990)	tor1 (ENSCHAG00000025993)	ST6GALNAC6 (ENSCHAG00000025999)	miga2 (ENSCHAG00000026011)	dolpp1 (ENSCHAG00000026063)	ENSCHAG00000026067	ENSCHAG00000026083	zbtb43 (ENSCHAG00000002356)	RALGPS1 (ENSCHAG00000002473)
Denticle herring	MODERN SPECIES	13	SDK1 (ENSDCDG00000005539)	ENSDCDG00000010843	ENSDCDG00000010850	ENSDCDG00000010859	ENSDCDG00000010863	ENSDCDG00000010870	ENSDCDG00000010876	ENSDCDG00000010881	f2rl1.1 (ENSDCDG00000010882)	LOXHD1 (ENSDCDG00000010896) #20	RNF165 (ENSDCDG00000010944) #19	zgc:77838 (ENSDCDG00000010949) #18	haus1 (ENSDCDG00000010956)	atp5fa1 (ENSDCDG00000010991) #17	st8sia5 (ENSDCDG00000011738) #21	rpl37 (ENSDCDG00000011745) #22	pdcl (ENSDCDG00000011751) #24	rpl28 (ENSDCDG00000011753) #25	ENSDCDG00000011754	ENSDCDG00000011796 #27	camsap1a (ENSDCDG00000012916) #29	notch1a (ENSDCDG00000012926) #28	tor1 (ENSDCDG00000012982)	nsa2 (ENSDCDG00000012992)	spout1 (ENSDCDG00000013004)	ST6GALNAC6 (ENSDCDG00000013067)	st6galnac4 (ENSDCDG00000013111)	miga2 (ENSDCDG00000013121)	dolpp1 (ENSDCDG00000013148)	ENSDCDG00000013160	NTNG2 (ENSDCDG00000013171)
Otophysi	ANCESTRAL SPECIES	124	ENSGT00940000156423.j	ENSGT00940000154827	ENSGT00950000183003.a.a.a.a.a	ENSGT00940000157778	ENSGT00390000007731	ENSGT00940000159569 #24	ENSGT00940000159324 #27	ENSGT00980000199895	ENSGT00390000008732.b #25	ENSGT00940000162727.a.b #33	ENSGT00940000163466	ENSGT00940000167622	ENSGT00390000013040 #31	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00940000155227.a #13	ENSGT00940000156090.b #15	ENSGT01000000214630 #16	ENSGT00550000074846 #17	ENSGT00390000006029	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00940000162230 #32	ENSGT00940000156880.c.a #30	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742 #35	ENSGT00390000004067 #36	ENSGT00390000006287 #37
Cyprinoidei	ANCESTRAL SPECIES	102								ENSGT00940000159569 #24	ENSGT00940000159324 #27	ENSGT00980000199895	ENSGT00390000008732.b #25	ENSGT00940000162727.a.b #33	ENSGT00390000013040 #31	ENSGT00390000018830.a.b #20	ENSGT01030000234535.C.c #21	ENSGT00390000005254 #22	ENSGT01000000214630 #16	ENSGT00940000156090.b #15	ENSGT00940000155227.a #13	ENSGT00550000074846 #17	ENSGT00390000006029	ENSGT00390000016167 #18	ENSGT00940000156997.b #19	ENSGT00940000162230 #32	ENSGT00940000156880.d ##30	ENSGT00940000155199.e.b	ENSGT00940000156880.c.a #30	ENSGT00940000157157.b.a.b #28	ENSGT00950000182975.a.a.b.l #29	ENSGT00950000183190.a.b.b #34	ENSGT00390000005742 #35
Zebrafish	MODERN SPECIES	13	ENSDARG00000096310	ccng2 (ENSDARG00000017602)	ccni (ENSDARG00000068214)	SHROOM3 (ENSDARG00000102180)	ENSDARG00000098408	ENSDARG00000103060	ENSDARG00000101786	ly6m6 (ENSDARG00000102159)	ENSDARG00000099332	ENSDARG00000098616	ENSDARG00000099416	ENSDARG00000104775	psmd5 (ENSDARG00000059046) #31	LOXHD1 (ENSDARG00000094738) #20	st8sia5 (ENSDARG00000036584) #21	rpl37 (ENSDARG00000034291) #22	hwa (ENSDARG00000094542) #16	zgc:122979 (ENSDARG00000004187) #15	thbs4b (ENSDARG00000020072) #13	atp5fa1 (ENSDARG00000010149) #17	haus1 (ENSDARG00000058968)	C21H18orf25 (ENSDARG00000046071) #18	RNF165 (ENSDARG00000077906) #19	B3GALT9 (ENSDARG00000094253) #32	ENSDARG00000090948	KCNT1 (ENSDARG00000079484) #30	notch1a (ENSDARG00000103554) #28	camsap1a (ENSDARG00000019208) #29	ENSDARG00000086337	cdk5rap2 (ENSDARG00000024219) #34	NUP188 (ENSDARG00000030022) #35
Cyprininae	ANCESTRAL SPECIES	535	ENSGT00390000008732.b.g #25	ENSGT00940000163304.j.a.a.g.a.b.a.a.a.a.b	ENSGT00940000159569.l #24	ENSGT00940000159324.a #27	ENSGT00980000199895.b	ENSGT00390000008732.b.h #25	ENSGT00940000162727.a.b #33	ENSGT00390000013040.o #31	ENSGT00390000018830.a.b.g #20	ENSGT01030000234535.C.c.b #21	ENSGT00940000165146	ENSGT01000000214630.c #16	ENSGT00390000013040.p #31	ENSGT00390000018830.a.b.h #20	ENSGT01030000234535.C.c.a #21	ENSGT00390000005254 #22
Cyprininae_a	ANCESTRAL SPECIES	227												ENSGT00940000162727.a.b.d #33	ENSGT00390000013040.p #31	ENSGT00390000018830.a.b.h #20	ENSGT01030000234535.C.c.a #21	ENSGT00390000005254 #22	ENSGT01030000234535.C.d #21	ENSGT00940000165146	ENSGT01000000214630.c #16	ENSGT00940000156090.b.f #15	ENSGT00940000155227.a.f #13	ENSGT00550000074846.fb.b #17	ENSGT00390000006029.z	ENSGT00390000016167.n.a #18	ENSGT00940000156997.b.c #19	ENSGT00940000162230.d #32	ENSGT00940000156880.c.a.d #30	ENSGT00940000157157.b.a.b.c #28	ENSGT00950000182975.a.a.b.l.e #29	ENSGT00950000183190.a.b.b.b #34	ENSGT00390000005742.u.a #35
Golden-line barbel	MODERN SPECIES	264													psmd5 (ENSSGRG00000019866) #31	ENSSGRG00000019988 #20	st8sia5 (ENSSGRG00000019989) #21	rpl37 (ENSSGRG00000019990) #22	zgc:122979 (ENSSGRG00000019994) #15	thbs4b (ENSSGRG00000020038) #13	atp5fa1 (ENSSGRG00000022577) #17	haus1 (ENSSGRG00000023222)	zgc:77838 (ENSSGRG00000023223) #18	RNF165 (ENSSGRG00000023224) #19	B3GALT9 (ENSSGRG00000023225) #32	KCNT1 (ENSSGRG00000023227) #30	notch1a (ENSSGRG00000023297) #28	camsap1a (ENSSGRG00000025920) #29	cdk5rap2 (ENSSGRG00000025936) #34	ENSSGRG00000025937 ##34	dolk (ENSSGRG00000026028) #36	phyhd1 (ENSSGRG00000026030) #37	ENSSGRG00000026038
Common carp reference	MODERN SPECIES	45	ENSCCRG00000072168	SHROOM3 (ENSCCRG00000039684)	ENSCCRG00000046640	ENSCCRG00000063249	ENSCCRG00000060320	ENSCCRG00000033526	ENSCCRG00000081971	ENSCCRG00000033546 #24	ENSCCRG00000033563 #27	ENSCCRG00000033536	ENSCCRG00000033586 #25	ENSCCRG00000055123 #33	psmd5 (ENSCCRG00000025255) #31	ENSCCRG00000025239 #20	st8sia5 (ENSCCRG00000025234) #21	rpl37 (ENSCCRG00000074601) #22	hwa (ENSCCRG00000025229) #16	zgc:122979 (ENSCCRG00000077918) #15	thbs4b (ENSCCRG00000053509) #13	atp5fa1 (ENSCCRG00000067873) #17	haus1 (ENSCCRG00000063333)	zgc:77838 (ENSCCRG00000042938) #18	RNF165 (ENSCCRG00000075967) #19	ENSCCRG00000035293 #32	ENSCCRG00000055216	ENSCCRG00000019257 #30	notch1a (ENSCCRG00000019731) #28	ENSCCRG00000020122	ENSCCRG00000019835	ENSCCRG00000019824 #29	ENSCCRG00000020126
Characiphysae	ANCESTRAL SPECIES	68	ENSGT00390000006287 #37	ENSGT00390000004067 #36	ENSGT00390000005742 #35	ENSGT00950000183190.a.b.b #34	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000157157.b.a.b #28	ENSGT00940000156880.c.a #30	ENSGT00940000162230 #32	ENSGT00940000156997.b #19	ENSGT00390000016167 #18	ENSGT00390000006029	ENSGT00550000074846 #17	ENSGT01000000214630 #16	ENSGT00940000156090.b #15	ENSGT00940000155227.a #13	ENSGT00390000005254 #22	ENSGT01030000234535.C #21	ENSGT00390000018830.a.b #20	ENSGT00390000013040 #31	ENSGT00940000162727.a.b #33	ENSGT00390000008732.b #25	ENSGT00980000199895	ENSGT00940000159324.c #27	ENSGT00940000159569 #24	ENSGT00390000007731	ENSGT00940000157778	ENSGT00950000183003.a.a.a.a.a	ENSGT00940000154827	ENSGT00940000156423.j	ENSGT00390000010767	ENSGT01050000244840.A.b.b.b
Channel catfish	MODERN SPECIES	9	gnrh2 (ENSIPUG00000005968)	gcnt4 (ENSIPUG00000005958)	cdk5rap2 (ENSIPUG00000005846) #34	ENSIPUG00000005821 #29	camsap1a (ENSIPUG00000005748) #29	notch1a (ENSIPUG00000005717) #28	KCNT1 (ENSIPUG00000005645) #30	B3GALT9 (ENSIPUG00000005634) #32	rnf165 (ENSIPUG00000005596) #19	c18h18orf25 (ENSIPUG00000005582) #18	haus1 (ENSIPUG00000005565)	atp5a1 (ENSIPUG00000005528) #17	hwa (ENSIPUG00000005509) #16	Dnajb5 (ENSIPUG00000005496) #15	thbs4b (ENSIPUG00000005393) #13	rpl37 (ENSIPUG00000005347) #22	st8sia5 (ENSIPUG00000005289) #21	LOXHD1 (ENSIPUG00000005125) #20	ENSIPUG00000005098	ENSIPUG00000005079	psmd5 (ENSIPUG00000004988) #31	rpl28 (ENSIPUG00000004935) #25	ENSIPUG00000004683 #27	PDCL (ENSIPUG00000004638) #24	ENSIPUG00000022292	ENSIPUG00000022286	ENSIPUG00000022274	ENSIPUG00000022269	ccni (ENSIPUG00000022251)	CCNG2 (ENSIPUG00000022244)	ENSIPUG00000022239
Characiphysae_b	ANCESTRAL SPECIES	73	ENSGT00390000006287 #37	ENSGT00390000004067 #36	ENSGT00390000005742 #35	ENSGT00950000183190.a.b.b #34	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000157157.b.a.b #28	ENSGT00940000156880.c.a #30	ENSGT00940000162230 #32	ENSGT00940000156997.b #19	ENSGT00390000016167 #18	ENSGT00390000006029	ENSGT00550000074846 #17	ENSGT01000000214630 #16	ENSGT00940000156090.b #15	ENSGT00940000155227.a #13	ENSGT00390000005254 #22	ENSGT01030000234535.C #21	ENSGT00390000018830.a.b #20	ENSGT00390000013040 #31	ENSGT00940000162727.a.b #33	ENSGT00390000008732.b #25	ENSGT00980000199895	ENSGT00940000159324.c #27	ENSGT00940000159569 #24	ENSGT00390000007731	ENSGT00940000157778	ENSGT00950000183003.a.a.a.a.a	ENSGT00940000154827	ENSGT00940000156423.j	ENSGT00390000010767	ENSGT01050000244840.A.b.b.b
Electric eel	MODERN SPECIES	817													atp5fa1 (ENSEEEG00000010092) #17	zgc:122979 (ENSEEEG00000010175) #15	thbs4b (ENSEEEG00000010178) #13	rpl37 (ENSEEEG00000010180) #22	st8sia5 (ENSEEEG00000010181) #21	LOXHD1 (ENSEEEG00000010183) #20	psmd5 (ENSEEEG00000010186) #31
Characoidei	ANCESTRAL SPECIES	67	ENSGT00390000006287 #37	ENSGT00390000004067 #36	ENSGT00390000005742 #35	ENSGT00950000183190.a.b.b #34	ENSGT00950000182975.a.a.b.l #29	ENSGT00940000157157.b.a.b #28	ENSGT00940000156880.c.a #30	ENSGT00940000162230 #32	ENSGT00940000156997.b #19	ENSGT00390000016167 #18	ENSGT00390000006029	ENSGT00550000074846 #17	ENSGT01000000214630 #16	ENSGT00940000156090.b #15	ENSGT00940000155227.a #13	ENSGT00390000005254 #22	ENSGT01030000234535.C #21	ENSGT00390000018830.a.b #20	ENSGT00390000013040 #31	ENSGT00940000162727.a.b #33	ENSGT00390000008732.b #25	ENSGT00980000199895	ENSGT00940000159324.c #27	ENSGT00940000159569 #24	ENSGT00390000007731	ENSGT00940000157778	ENSGT00950000183003.a.a.a.a.a	ENSGT00940000154827	ENSGT00940000156423.j	ENSGT00390000010767	ENSGT01050000244840.A.b.b.b
Red-bellied piranha	MODERN SPECIES	315							KCNT1 (ENSPNAG00000018034) #30	B3GALT9 (ENSPNAG00000018047) #32	RNF165 (ENSPNAG00000018081) #19	zgc:77838 (ENSPNAG00000018095) #18	haus1 (ENSPNAG00000018116)	atp5fa1 (ENSPNAG00000018169) #17	hwa (ENSPNAG00000003510) #16	zgc:122979 (ENSPNAG00000003513) #15	thbs4b (ENSPNAG00000018315) #13	rpl37 (ENSPNAG00000018334) #22	st8sia5 (ENSPNAG00000018393) #21	LOXHD1 (ENSPNAG00000018553) #20	psmd5 (ENSPNAG00000018581) #31	ENSPNAG00000003545 #33	rpl28 (ENSPNAG00000003547) #25	ENSPNAG00000018692	ENSPNAG00000003550 #27	pdcl (ENSPNAG00000018760) #24	ENSPNAG00000018770	SHROOM3 (ENSPNAG00000018824)	ENSPNAG00000018843	ccni (ENSPNAG00000006596)	ccng2 (ENSPNAG00000003557)	ENSPNAG00000018927	F2RL2 (ENSPNAG00000018937)
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	5	ENSAMXG00000039991	ENSAMXG00000030624 #29	ENSAMXG00000031682	camsap1a (ENSAMXG00000014589) #29	notch1a (ENSAMXG00000014597) #28	KCNT1 (ENSAMXG00000014615) #30	ENSAMXG00000014641	B3GALT9 (ENSAMXG00000026355) #32	RNF165 (ENSAMXG00000042584) #19	zgc:77838 (ENSAMXG00000014654) #18	haus1 (ENSAMXG00000014661)	atp5fa1 (ENSAMXG00000014670) #17	hwa (ENSAMXG00000014677) #16	zgc:122979 (ENSAMXG00000014680) #15	thbs4b (ENSAMXG00000014685) #13	rpl37 (ENSAMXG00000014690) #22	st8sia5 (ENSAMXG00000014692) #21	LOXHD1 (ENSAMXG00000014698) #20	psmd5 (ENSAMXG00000014727) #31	ENSAMXG00000039920	ENSAMXG00000040284	ENSAMXG00000043097	ENSAMXG00000014809	rpl28 (ENSAMXG00000042541) #25	ENSAMXG00000041484	SEC16A (ENSAMXG00000014823) #27	ENSAMXG00000041650	ENSAMXG00000042374	pdcl (ENSAMXG00000035184) #24	ENSAMXG00000034570	SHROOM3 (ENSAMXG00000013226)
Mexicana tetra	MODERN SPECIES	1052															ENSAMXG00000034071	RPL37 (ENSAMXG00000040983) #22
Osteoglossiformes	ANCESTRAL SPECIES	39	ENSGT00940000156081	ENSGT00940000168229	ENSGT00950000182925.A.h	ENSGT00940000161260	ENSGT01050000244968.c.c	ENSGT00940000156730.b	ENSGT00940000156183	ENSGT00940000157286	ENSGT00940000158788	ENSGT00550000074846 #17	ENSGT00390000006029	ENSGT00390000016167 #18	ENSGT00940000156997.c #19	ENSGT00390000018830.a.a.d ##20	ENSGT01030000234535.C #21	ENSGT00390000005254 #22	ENSGT00940000158865	ENSGT00390000017462	ENSGT01050000244902.a.a.a.a.a.a	ENSGT00390000009329	ENSGT00940000155498	ENSGT00940000155389	ENSGT00940000157105	ENSGT00390000004161	ENSGT00940000157140.b.a.b.b	ENSGT00940000153288.b.d	ENSGT00940000157156	ENSGT00390000004228	ENSGT00940000155831	ENSGT00950000182983.B.a.b	ENSGT00390000008107.c.a
P. kingsleyae	MODERN SPECIES	2	MFSD14B (ENSPKIG00000021197)	ENSPKIG00000021125	ENSPKIG00000021087	nxnl2 (ENSPKIG00000021060)	CSGALNACT1 (ENSPKIG00000021027)	PLPP1 (ENSPKIG00000020958)	mtrex (ENSPKIG00000020833)	DHX29 (ENSPKIG00000020627)	PSTPIP2 (ENSPKIG00000020526)	atp5fa1 (ENSPKIG00000020441) #17	haus1 (ENSPKIG00000020381)	zgc:77838 (ENSPKIG00000020329) #18	RNF165 (ENSPKIG00000020264) #19	LOXHD1 (ENSPKIG00000020216) ##20	st8sia5 (ENSPKIG00000020159) #21	rpl37 (ENSPKIG00000020129) #22	prkaa1 (ENSPKIG00000020098)	ttc33 (ENSPKIG00000020064)	PTGER4 (ENSPKIG00000020041)	ENSPKIG00000019996	MAP1B (ENSPKIG00000019941)	ptcd2 (ENSPKIG00000019896)	ZNF366 (ENSPKIG00000019857)	TNPO1 (ENSPKIG00000019795)	fcho2 (ENSPKIG00000019676)	TMEM174 (ENSPKIG00000019625)	foxd1 (ENSPKIG00000019613)	ENSPKIG00000019488	ankra2 (ENSPKIG00000019426)	utp15 (ENSPKIG00000019386)	ARHGEF28 (ENSPKIG00000019115)
Asian bonytongue	MODERN SPECIES	21	ENSSFOG00015014224	ENSSFOG00015014244	ENSSFOG00015024232	nxnl2 (ENSSFOG00015014298)	CSGALNACT1 (ENSSFOG00015029556)	PLPP1 (ENSSFOG00015014334)	mtrex (ENSSFOG00015014355)	DHX29 (ENSSFOG00015014445)	PSTPIP2 (ENSSFOG00015014582)	atp5fa1 (ENSSFOG00015014613) #17	haus1 (ENSSFOG00015014680)	zgc:77838 (ENSSFOG00015014742) #18	RNF165 (ENSSFOG00015014787) #19	LOXHD1 (ENSSFOG00015014859) ##20	st8sia5 (ENSSFOG00015015127) #21	rpl37 (ENSSFOG00015024291) #22	prkaa1 (ENSSFOG00015015200)	ttc33 (ENSSFOG00015031811)	ptger4b (ENSSFOG00015029378)	MAP1B (ENSSFOG00015015263)	ptcd2 (ENSSFOG00015031685)	ZNF366 (ENSSFOG00015015427)	TNPO1 (ENSSFOG00015015448)	fcho2 (ENSSFOG00015015583)	TMEM174 (ENSSFOG00015015636)	foxd1 (ENSSFOG00015030211)	BTF3 (ENSSFOG00015015647)	ankra2 (ENSSFOG00015015678)	utp15 (ENSSFOG00015015712)	ARHGEF28 (ENSSFOG00015015817)	ENC1 (ENSSFOG00015025627)