Murinae	ANCESTRAL SPECIES	35	ENSGT00940000157678	ENSGT00940000157234 #7	ENSGT00940000161024 #8	ENSGT00390000000917 #9	ENSGT00390000006347.b #10	ENSGT00940000155401.j ##11	ENSGT00940000156564 #12	ENSGT00940000155360.B #14	ENSGT00510000049560 #15	ENSGT00940000162479 #16	ENSGT00640000092035 #17	ENSGT00390000018090 #13	ENSGT00940000157872 #19	ENSGT00940000157849 #20	ENSGT00940000157874 #21	ENSGT00940000154474.A #22	ENSGT00940000157694 #23	ENSGT00940000154505.A #24	ENSGT00390000001101 #25	ENSGT00940000156905 #27	ENSGT00950000182899.B.a #28	ENSGT00940000154927	ENSGT00530000063627.a #29	ENSGT00940000157453 #30	ENSGT00390000001394 #31	ENSGT00940000154652 #32	ENSGT01030000234579.B.b #33	ENSGT00940000159927 #34	ENSGT00940000160889 #35	ENSGT00940000161271 #36	ENSGT00390000016480 #37
Rat	MODERN SPECIES	7	Col4a2 (ENSRNOG00000023972) #7	Rab20 (ENSRNOG00000023991) #8	Naxd (ENSRNOG00000015021) #9	Cars2 (ENSRNOG00000014526) #10	Ing1 (ENSRNOG00000014520) #11	Ankrd10 (ENSRNOG00000064616) #12	AABR07026557.1 (ENSRNOG00000053136) #13	Arhgef7 (ENSRNOG00000012934) #14	Tex29 (ENSRNOG00000033585) #15	Sox1 (ENSRNOG00000064976) #16	LOC102553495 (ENSRNOG00000031681) #17	Spaca7 (ENSRNOG00000054006) #18	Tubgcp3 (ENSRNOG00000017085) #19	Atp11a (ENSRNOG00000017154) #20	Mcf2l (ENSRNOG00000028426) #21	F7 (ENSRNOG00000032737) #22	F10 (ENSRNOG00000033444) #23	Proz (ENSRNOG00000019700) #24	Pcid2 (ENSRNOG00000025222) #25	ENSRNOG00000064057 #26	Cul4a (ENSRNOG00000019649) #27	Lamp1 (ENSRNOG00000019629) #28	Adprhl1 (ENSRNOG00000019504) #29	Dcun1d2 (ENSRNOG00000019473) #30	Tmco3 (ENSRNOG00000046973) #31	Tfdp1 (ENSRNOG00000019222) #32	Atp4b (ENSRNOG00000018543) #33	Grk1 (ENSRNOG00000018430) #34	Tmem255b (ENSRNOG00000026336) #35	Gas6 (ENSRNOG00000018233) #36	LOC290876 (ENSRNOG00000026740) #37
Mus	ANCESTRAL SPECIES	6	ENSGT00940000157234 #7	ENSGT00940000161024 #8	ENSGT00390000000917 #9	ENSGT00390000006347.b #10	ENSGT00940000155401.j ##11	ENSGT00940000156564 #12	ENSGT00940000155360.B #14	ENSGT00510000049560 #15	ENSGT00860000135683	ENSGT00940000162479 #16	ENSGT00900000143323.A	ENSGT00390000018090 #13	ENSGT00940000157872 #19	ENSGT00940000157849 #20	ENSGT00940000157874 #21	ENSGT00940000154474.A #22	ENSGT00940000157694 #23	ENSGT00940000154505.A #24	ENSGT00390000001101 #25	ENSGT00940000156905 #27	ENSGT00950000182899.B.a #28	ENSGT00940000154927	ENSGT00530000063627.a #29	ENSGT00940000157453 #30	ENSGT00390000001394 #31	ENSGT00940000154652.i #32	ENSGT01030000234579.B.b #33	ENSGT00940000159927 #34	ENSGT00940000160889 #35	ENSGT00940000161271 #36	ENSGT00390000016480 #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000157234 #7	ENSGT00940000161024 #8	ENSGT00390000000917 #9	ENSGT00390000006347.b #10	ENSGT00940000155401.j ##11	ENSGT00940000156564 #12	ENSGT00940000155360.B #14	ENSGT00510000049560 #15	ENSGT00860000135683	ENSGT00940000162479 #16	ENSGT00900000143323.A	ENSGT00390000018090 #13	ENSGT00940000157872 #19	ENSGT00940000157849 #20	ENSGT00940000157874 #21	ENSGT00940000154474.A #22	ENSGT00940000157694 #23	ENSGT00940000154505.A #24	ENSGT00390000001101 #25	ENSGT00940000156905 #27	ENSGT00950000182899.B.a #28	ENSGT00940000154927	ENSGT00530000063627.a #29	ENSGT00940000157453 #30	ENSGT00390000001394 #31	ENSGT00940000154652.i #32	ENSGT01030000234579.B.b #33	ENSGT00940000159927 #34	ENSGT00940000160889 #35	ENSGT00940000161271 #36	ENSGT00390000016480 #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000157234 #7	ENSGT00940000161024 #8	ENSGT00390000000917 #9	ENSGT00390000006347.b #10	ENSGT00940000155401.j ##11	ENSGT00940000156564 #12	ENSGT00940000155360.B #14	ENSGT00510000049560 #15	ENSGT00860000135683	ENSGT00940000162479 #16	ENSGT00900000143323.A	ENSGT00390000018090 #13	ENSGT00940000157872 #19	ENSGT00940000157849 #20	ENSGT00940000157874 #21	ENSGT00940000154474.A #22	ENSGT00940000157694 #23	ENSGT00940000154505.A #24	ENSGT00390000001101 #25	ENSGT00940000156905 #27	ENSGT00950000182899.B.a #28	ENSGT00940000154927	ENSGT00530000063627.a #29	ENSGT00940000157453 #30	ENSGT00390000001394 #31	ENSGT00940000154652.i #32	ENSGT01030000234579.B.b #33	ENSGT00940000159927 #34	ENSGT00940000160889 #35	ENSGT00940000161271 #36	ENSGT00390000016480 #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000157234 #7	ENSGT00940000161024 #8	ENSGT00390000000917 #9	ENSGT00390000006347.b #10	ENSGT00940000155401.j ##11	ENSGT00940000156564 #12	ENSGT00940000155360.B #14	ENSGT00510000049560 #15	ENSGT00860000135683	ENSGT00940000162479 #16	ENSGT00900000143323.A	ENSGT00390000018090 #13	ENSGT00940000157872 #19	ENSGT00940000157849 #20	ENSGT00940000157874 #21	ENSGT00940000154474.A #22	ENSGT00940000157694 #23	ENSGT00940000154505.A #24	ENSGT00390000001101 #25	ENSGT00940000156905 #27	ENSGT00950000182899.B.a #28	ENSGT00940000154927	ENSGT00530000063627.a #29	ENSGT00940000157453 #30	ENSGT00390000001394 #31	ENSGT00940000154652.i #32	ENSGT01030000234579.B.b #33	ENSGT00940000159927 #34	ENSGT00940000160889 #35	ENSGT00940000161271 #36	ENSGT00390000016480 #37
spretus	MODERN SPECIES	17	Rab20 (MGP_SPRETEiJ_G0031924) #8	Naxd (MGP_SPRETEiJ_G0031925) #9	Cars2 (MGP_SPRETEiJ_G0031926) #10	Ing1 (MGP_SPRETEiJ_G0031927) ##11	Ankrd10 (MGP_SPRETEiJ_G0031928) #12	Spaca7b (MGP_SPRETEiJ_G0031929) #13	Arhgef7 (MGP_SPRETEiJ_G0031930) #14	Tex29 (MGP_SPRETEiJ_G0031931) #15	MGP_SPRETEiJ_G0031932	Sox1 (MGP_SPRETEiJ_G0031933) #16	MGP_SPRETEiJ_G0031934	Spaca7 (MGP_SPRETEiJ_G0031935) #13	Tubgcp3 (MGP_SPRETEiJ_G0031936) #19	Atp11a (MGP_SPRETEiJ_G0031937) #20	Mcf2l (MGP_SPRETEiJ_G0031938) #21	F7 (MGP_SPRETEiJ_G0031939) #22	F10 (MGP_SPRETEiJ_G0031940) #23	Proz (MGP_SPRETEiJ_G0031941) #24	Pcid2 (MGP_SPRETEiJ_G0031942) #25	Cul4a (MGP_SPRETEiJ_G0031943) #27	Lamp1 (MGP_SPRETEiJ_G0031944) #28	Grtp1 (MGP_SPRETEiJ_G0031945)	Adprhl1 (MGP_SPRETEiJ_G0031946) #29	Dcun1d2 (MGP_SPRETEiJ_G0031947) #30	Tmco3 (MGP_SPRETEiJ_G0031948) #31	Tfdp1 (MGP_SPRETEiJ_G0031949) #32	Atp4b (MGP_SPRETEiJ_G0031950) #33	Grk1 (MGP_SPRETEiJ_G0031951) #34	Tmem255b (MGP_SPRETEiJ_G0031952) #35	Gas6 (MGP_SPRETEiJ_G0031953) #36	1700029H14Rik (MGP_SPRETEiJ_G0031954) #37
Steppe mouse	MODERN SPECIES	3344	Ankrd10 (ENSMSIG00000009467) #12	Spaca7b (ENSMSIG00000009444) #13	ENSMSIG00000009432	ENSMSIG00000009425	ENSMSIG00000009396	Arhgef7 (ENSMSIG00000009198) #14	Tex29 (ENSMSIG00000009088) #15	ENSMSIG00000009060	ENSMSIG00000009016 #17	ENSMSIG00000009009	Spaca7 (ENSMSIG00000008969) #13	ENSMSIG00000007709 #19	ENSMSIG00000007686	Atp11a (ENSMSIG00000007316) #20	Mcf2l (ENSMSIG00000006777) #21	F7 (ENSMSIG00000006688) #22	F10 (ENSMSIG00000006622) #23	ENSMSIG00000006611 #24	Pcid2 (ENSMSIG00000006579) #25	Cul4a (ENSMSIG00000006476) #27	Lamp1 (ENSMSIG00000006411) #28	Grtp1 (ENSMSIG00000006285)	Adprhl1 (ENSMSIG00000006243) #29	ENSMSIG00000006071 #30	Tmco3 (ENSMSIG00000006023) #31	ENSMSIG00000005980 #32	Atp4b (ENSMSIG00000005950) #33	Grk1 (ENSMSIG00000005917) #34	Tmem255b (ENSMSIG00000005845) #35	Gas6 (ENSMSIG00000005788) #36	1700029H14Rik (ENSMSIG00000005649) #37
Mouse	MODERN SPECIES	17	Col4a1 (ENSMUSG00000031502)	Col4a2 (ENSMUSG00000031503) #7	Rab20 (ENSMUSG00000031504) #8	Naxd (ENSMUSG00000031505) #9	Cars2 (ENSMUSG00000056228) #10	Ing1 (ENSMUSG00000045969) ##11	Ankrd10 (ENSMUSG00000031508) #12	Spaca7b (ENSMUSG00000031509) #13	Arhgef7 (ENSMUSG00000031511) #14	Tex29 (ENSMUSG00000031512) #15	Sox1 (ENSMUSG00000096014) #16	Spaca7 (ENSMUSG00000010435) #13	Tubgcp3 (ENSMUSG00000000759) #19	Atp11a (ENSMUSG00000031441) #20	Mcf2l (ENSMUSG00000031442) #21	F7 (ENSMUSG00000031443) #22	F10 (ENSMUSG00000031444) #23	Proz (ENSMUSG00000031445) #24	Pcid2 (ENSMUSG00000038542) #25	Cul4a (ENSMUSG00000031446) #27	Lamp1 (ENSMUSG00000031447) #28	Grtp1 (ENSMUSG00000038515)	Adprhl1 (ENSMUSG00000031448) #29	Dcun1d2 (ENSMUSG00000038506) #30	Tmco3 (ENSMUSG00000038497) #31	Tfdp1 (ENSMUSG00000038482) #32	Atp4b (ENSMUSG00000031449) #33	Grk1 (ENSMUSG00000031450) #34	Tmem255b (ENSMUSG00000038457) #35	Gas6 (ENSMUSG00000031451) #36	1700029H14Rik (ENSMUSG00000031452) #37
Ryukyu mouse	MODERN SPECIES	17	Col4a2 (MGP_CAROLIEiJ_G0030815) #7	Rab20 (MGP_CAROLIEiJ_G0030816) #8	Naxd (MGP_CAROLIEiJ_G0030817) #9	Cars2 (MGP_CAROLIEiJ_G0030818) #10	Ing1 (MGP_CAROLIEiJ_G0030819) ##11	MGP_CAROLIEiJ_G0030820 #13	MGP_CAROLIEiJ_G0030821 #14	MGP_CAROLIEiJ_G0030822 #15	MGP_CAROLIEiJ_G0030823	Sox1 (MGP_CAROLIEiJ_G0030824) #16	MGP_CAROLIEiJ_G0030825	Spaca7 (MGP_CAROLIEiJ_G0030826) #13	MGP_CAROLIEiJ_G0030827	Atp11a (MGP_CAROLIEiJ_G0030828) #20	Mcf2l (MGP_CAROLIEiJ_G0030829) #21	F7 (MGP_CAROLIEiJ_G0030830) #22	MGP_CAROLIEiJ_G0030831 #23	Proz (MGP_CAROLIEiJ_G0030832) #24	Pcid2 (MGP_CAROLIEiJ_G0030833) #25	MGP_CAROLIEiJ_G0030834 #27	Lamp1 (MGP_CAROLIEiJ_G0030835) #28	Grtp1 (MGP_CAROLIEiJ_G0030836)	Adprhl1 (MGP_CAROLIEiJ_G0030837) #29	MGP_CAROLIEiJ_G0030838 #30	Tmco3 (MGP_CAROLIEiJ_G0030839) #31	Atp4b (MGP_CAROLIEiJ_G0030840) #33	MGP_CAROLIEiJ_G0030841 #34	Tmem255b (MGP_CAROLIEiJ_G0030842) #35	Gas6 (MGP_CAROLIEiJ_G0030843) #36	1700029H14Rik (MGP_CAROLIEiJ_G0030844) #37	Rasa3 (MGP_CAROLIEiJ_G0030845)
Shrew mouse	MODERN SPECIES	10	Rab20 (MGP_PahariEiJ_G0021277) #8	Naxd (MGP_PahariEiJ_G0021278) #9	Cars2 (MGP_PahariEiJ_G0021279) #10	Ing1 (MGP_PahariEiJ_G0021280) ##11	Ankrd10 (MGP_PahariEiJ_G0021281) #12	Spaca7b (MGP_PahariEiJ_G0021282) #13	Arhgef7 (MGP_PahariEiJ_G0021283) #14	MGP_PahariEiJ_G0021284 #15	MGP_PahariEiJ_G0021285	Sox1 (MGP_PahariEiJ_G0021286) #16	MGP_PahariEiJ_G0021287	Spaca7 (MGP_PahariEiJ_G0021288) #13	Tubgcp3 (MGP_PahariEiJ_G0021289) #19	Atp11a (MGP_PahariEiJ_G0021290) #20	Mcf2l (MGP_PahariEiJ_G0021291) #21	F7 (MGP_PahariEiJ_G0021292) #22	F10 (MGP_PahariEiJ_G0021293) #23	Proz (MGP_PahariEiJ_G0021294) #24	Pcid2 (MGP_PahariEiJ_G0021295) #25	Cul4a (MGP_PahariEiJ_G0021296) #27	Lamp1 (MGP_PahariEiJ_G0021297) #28	Grtp1 (MGP_PahariEiJ_G0021298)	MGP_PahariEiJ_G0021299 #29	Dcun1d2 (MGP_PahariEiJ_G0021300) #30	Tmco3 (MGP_PahariEiJ_G0021301) #31	Tfdp1 (MGP_PahariEiJ_G0021302) #32	Atp4b (MGP_PahariEiJ_G0021303) #33	Grk1 (MGP_PahariEiJ_G0021304) #34	Tmem255b (MGP_PahariEiJ_G0021305) #35	Gas6 (MGP_PahariEiJ_G0021306) #36	1700029H14Rik (MGP_PahariEiJ_G0021307) #37