Vertebrata	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Euteleostomi	ANCESTRAL SPECIES	1060															ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22
Sarcopterygii	ANCESTRAL SPECIES	352						ENSGT00940000153231.A	ENSGT00940000159633	ENSGT00940000161081	ENSGT00940000165688	ENSGT00940000153634.a #21	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22
Tetrapoda	ANCESTRAL SPECIES	260										ENSGT00730000111146 #16	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22
Amniota	ANCESTRAL SPECIES	65										ENSGT00730000111146 #16	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00940000155317.a.a	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00390000017352	ENSGT00390000006665.b	ENSGT00940000164289.a	ENSGT00940000153231.A	ENSGT00390000012929	ENSGT00390000016016.B	ENSGT00940000160369
Mammalia	ANCESTRAL SPECIES	46	ENSGT00390000008631.b	ENSGT00940000154102.b	ENSGT00940000157503 #37	ENSGT00720000108868 #36	ENSGT00940000158963 #34	ENSGT00940000161689 #33	ENSGT00950000182827.B #32	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30	ENSGT00940000159128	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00940000155317.a.a	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00390000017352	ENSGT00390000006665.b	ENSGT00940000164289.a	ENSGT00940000153231.A	ENSGT00390000012929	ENSGT00940000160369	ENSGT00390000003022
Theria	ANCESTRAL SPECIES	68							ENSGT00940000159633	ENSGT00940000161978	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00390000017352	ENSGT00390000006665.b	ENSGT00940000153231.A	ENSGT00390000012929
Eutheria	ANCESTRAL SPECIES	26	ENSGT00940000161978	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Primates	ANCESTRAL SPECIES	19	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.b.ab.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Haplorrhini	ANCESTRAL SPECIES	18	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.b.ab.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Simiiformes	ANCESTRAL SPECIES	9	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00910000145701	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484.e.a #10	ENSGT00390000012484.f.a.b.a ##13	ENSGT00390000012484.f.a.b.b.b ##13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00910000145701	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Hominoidea	ANCESTRAL SPECIES	16	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484.f.a.b.b.b ##13	ENSGT00630000089895.x #14	ENSGT00390000012484.f.a.b.b.a.b.b ##13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484.f.a.b.b.b ##13	ENSGT00630000089895.x #14	ENSGT00390000012484.f.a.b.b.a.b.b.a ##13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00950000182962.b.a.g	ENSGT00910000147902	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484.f.a.b.b.b ##13	ENSGT00630000089895.x #14	ENSGT00390000012484.f.a.b.b.a.b.b.a ##13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT01030000234626.D.l #25	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484.e.a.b #10	ENSGT00390000012484.f.a.b.b.a.b.a #12	ENSGT00390000012484.f.a.b.b.a.a.a.b.a #13	ENSGT00390000012484.f.a.b.b.a.b.b.a ##13	ENSGT00630000089895.x #14	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063.a #23	ENSGT00940000153941.a.b #24	ENSGT01030000234626.D.l #25	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Pan	ANCESTRAL SPECIES	6	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484.e.a.b #10	ENSGT00390000012484.f.a.b.b.a.b.a #12	ENSGT00390000012484.f.a.b.b.a.a.a.b.a #13	ENSGT00390000012484.f.a.b.b.a.b.b.a ##13	ENSGT00630000089895.x #14	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063.a #23	ENSGT00940000153941.a.b #24	ENSGT01030000234626.D.l #25	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Bonobo	MODERN SPECIES	369	ZNF81 (ENSPPAG00000027628) #7	ZNF630 (ENSPPAG00000036338) #8	ENSPPAG00000037481 #9	ENSPPAG00000029279 #10	ENSPPAG00000034188 #11	ENSPPAG00000035462 #12	SSX3 (ENSPPAG00000043286) #13	ENSPPAG00000030049 #14	SLC38A5 (ENSPPAG00000037376) #15	FTSJ1 (ENSPPAG00000028540) #16	PORCN (ENSPPAG00000032866) #17	ENSPPAG00000041670 #18	TBC1D25 (ENSPPAG00000038374) #19	RBM3 (ENSPPAG00000034179) #20	WDR13 (ENSPPAG00000030357) #21	WAS (ENSPPAG00000032465) #22	SUV39H1 (ENSPPAG00000030054) #23	GLOD5 (ENSPPAG00000042162) #24	ENSPPAG00000035139 #25	GATA1 (ENSPPAG00000034872) #26	HDAC6 (ENSPPAG00000033426) #27	ERAS (ENSPPAG00000026637) #28	PCSK1N (ENSPPAG00000034344) #29	ENSPPAG00000036547 #30	PQBP1 (ENSPPAG00000038832) #31	SLC35A2 (ENSPPAG00000026694) #32	PIM2 (ENSPPAG00000041108) #33	ENSPPAG00000043025 #34	KCND1 (ENSPPAG00000035010) #35	GRIPAP1 (ENSPPAG00000040230) #36	TFE3 (ENSPPAG00000028832) #37
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	862																ENSPTRG00000050143 #22	SUV39H1 (ENSPTRG00000050015) #23
Chimpanzee	MODERN SPECIES	972	ENSPTRG00000021853 #9	ENSPTRG00000041924 #8	ENSPTRG00000021919 #10	ENSPTRG00000021921 ##13	ENSPTRG00000042703 #12	ENSPTRG00000051358 #13	ENSPTRG00000023969 ##13	ENSPTRG00000049383 #14	SLC38A5 (ENSPTRG00000021860) #15	FTSJ1 (ENSPTRG00000049433) #16	PORCN (ENSPTRG00000047836) #17	EBP (ENSPTRG00000044865) #18	TBC1D25 (ENSPTRG00000048815) #19	RBM3 (ENSPTRG00000021864) #20	WDR13 (ENSPTRG00000021865) #21	ENSPTRG00000045037 #22	ENSPTRG00000021867 ##23	GLOD5 (ENSPTRG00000045013) #24	ENSPTRG00000049494 #25	GATA1 (ENSPTRG00000048542) #26	ENSPTRG00000021870	ERAS (ENSPTRG00000049150) #28	PCSK1N (ENSPTRG00000049734) #29	TIMM17B (ENSPTRG00000021872) #30	PQBP1 (ENSPTRG00000021873) #31	SLC35A2 (ENSPTRG00000021874) #32	PIM2 (ENSPTRG00000021875) #33	OTUD5 (ENSPTRG00000021876) #34	KCND1 (ENSPTRG00000021877) #35	GRIPAP1 (ENSPTRG00000051549) #36	TFE3 (ENSPTRG00000021879) #37
Human	MODERN SPECIES	1827	SPACA5 (ENSG00000171489) #9	SPACA5B (ENSG00000171478) #9	SSX5 (ENSG00000165583) ##13	SSX1 (ENSG00000126752) #10	SSX3 (ENSG00000165584) #13	SSX4 (ENSG00000268009) ##13	SSX4B (ENSG00000269791) ##13	SLC38A5 (ENSG00000017483) #15	FTSJ1 (ENSG00000068438) #16	PORCN (ENSG00000102312) #17	EBP (ENSG00000147155) #18	ENSG00000286268	TBC1D25 (ENSG00000068354) #19	RBM3 (ENSG00000102317) #20	WDR13 (ENSG00000101940) #21	WAS (ENSG00000015285) #22	SUV39H1 (ENSG00000101945) #23	GLOD5 (ENSG00000171433) #24	GATA1 (ENSG00000102145) #26	HDAC6 (ENSG00000094631) #27	ERAS (ENSG00000187682) #28	PCSK1N (ENSG00000102109) #29	PQBP1 (ENSG00000102103) #31	TIMM17B (ENSG00000126768) #30	SLC35A2 (ENSG00000102100) #32	PIM2 (ENSG00000102096) #33	OTUD5 (ENSG00000068308) #34	KCND1 (ENSG00000102057) #35	GRIPAP1 (ENSG00000068400) #36	TFE3 (ENSG00000068323) #37	CCDC120 (ENSG00000147144)
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	523	ZNF81 (ENSGGOG00000042509) #7	ZNF182 (ENSGGOG00000002384)	ENSGGOG00000026765 #9	ENSGGOG00000024103 ##13	ENSGGOG00000010688 ##13	ENSGGOG00000026107 ##13	ENSGGOG00000042305 #14	SLC38A5 (ENSGGOG00000013314) #15	FTSJ1 (ENSGGOG00000028552) #16	PORCN (ENSGGOG00000004796) #17	ENSGGOG00000043092 #18	TBC1D25 (ENSGGOG00000039233) #19	RBM3 (ENSGGOG00000005864) #20	WDR13 (ENSGGOG00000005870) #21	ENSGGOG00000004622 #22	WAS (ENSGGOG00000039779) #22	SUV39H1 (ENSGGOG00000027774) #23	GLOD5 (ENSGGOG00000007330) #24	ENSGGOG00000040202 #25	GATA1 (ENSGGOG00000023559) #26	HDAC6 (ENSGGOG00000004525) #27	ERAS (ENSGGOG00000004536) #28	PCSK1N (ENSGGOG00000004538) #29	ENSGGOG00000011427 #30	PQBP1 (ENSGGOG00000011431) #31	SLC35A2 (ENSGGOG00000011437) #32	PIM2 (ENSGGOG00000011440) #33	ENSGGOG00000002727 #35	GRIPAP1 (ENSGGOG00000023074) #36	TFE3 (ENSGGOG00000014023) #37	CCDC120 (ENSGGOG00000000586)
Gorilla	MODERN SPECIES	523	ENSGGOG00000024165	ZNF81 (ENSGGOG00000042509) #7	ZNF182 (ENSGGOG00000002384)	ENSGGOG00000026765 #9	ENSGGOG00000024103 ##13	ENSGGOG00000010688 ##13	ENSGGOG00000026107 ##13	ENSGGOG00000042305 #14	SLC38A5 (ENSGGOG00000013314) #15	FTSJ1 (ENSGGOG00000028552) #16	PORCN (ENSGGOG00000004796) #17	ENSGGOG00000043092 #18	TBC1D25 (ENSGGOG00000039233) #19	RBM3 (ENSGGOG00000005864) #20	WDR13 (ENSGGOG00000005870) #21	ENSGGOG00000004622 #22	WAS (ENSGGOG00000039779) #22	SUV39H1 (ENSGGOG00000027774) #23	GLOD5 (ENSGGOG00000007330) #24	ENSGGOG00000040202 #25	GATA1 (ENSGGOG00000023559) #26	HDAC6 (ENSGGOG00000004525) #27	ERAS (ENSGGOG00000004536) #28	PCSK1N (ENSGGOG00000004538) #29	ENSGGOG00000011427 #30	PQBP1 (ENSGGOG00000011431) #31	SLC35A2 (ENSGGOG00000011437) #32	PIM2 (ENSGGOG00000011440) #33	ENSGGOG00000002727 #35	GRIPAP1 (ENSGGOG00000023074) #36	TFE3 (ENSGGOG00000014023) #37
Orangutan	MODERN SPECIES	242	ENSPPYG00000040299 ##13	ENSPPYG00000038500 #10	ENSPPYG00000035614 ##13	ENSPPYG00000034709 ##13	ENSPPYG00000030665 ##13	ENSPPYG00000037125 ##13	ENSPPYG00000035792 #13	ENSPPYG00000037009 ##13	SLC38A5 (ENSPPYG00000020308) #15	FTSJ1 (ENSPPYG00000020309) #16	PORCN (ENSPPYG00000020310) #17	EBP (ENSPPYG00000020311) #18	TBC1D25 (ENSPPYG00000038579) #19	RBM3 (ENSPPYG00000020314)	WDR13 (ENSPPYG00000020315) #21	WAS (ENSPPYG00000020316) #22	SUV39H1 (ENSPPYG00000020317) #23	GLOD5 (ENSPPYG00000020318) #24	GATA1 (ENSPPYG00000020319) #26	HDAC6 (ENSPPYG00000020320) #27	ERAS (ENSPPYG00000020321) #28	PCSK1N (ENSPPYG00000020322) #29	ENSPPYG00000020323 #30	PQBP1 (ENSPPYG00000035767) #31	SLC35A2 (ENSPPYG00000041299) #32	PIM2 (ENSPPYG00000020326) #33	OTUD5 (ENSPPYG00000020327) #34	KCND1 (ENSPPYG00000020328) #35	GRIPAP1 (ENSPPYG00000020330) #36	TFE3 (ENSPPYG00000029376) #37	CCDC120 (ENSPPYG00000020331)
Gibbon	MODERN SPECIES	449	ZNF182 (ENSNLEG00000003482)	ENSNLEG00000003487 #9	ZNF630 (ENSNLEG00000003503) #8	ENSNLEG00000032650 #10	ENSNLEG00000003612 #11	ENSNLEG00000003614 #15	ENSNLEG00000028121 #14	ENSNLEG00000036118 ##13	ENSNLEG00000032683 #11	FTSJ1 (ENSNLEG00000007816) #16	PORCN (ENSNLEG00000007822) #17	EBP (ENSNLEG00000007836) #18	ENSNLEG00000007838 #19	ENSNLEG00000028027 #20	WDR13 (ENSNLEG00000007843) #21	WAS (ENSNLEG00000007859) #22	SUV39H1 (ENSNLEG00000007864) #23	GLOD5 (ENSNLEG00000007868) #24	GATA1 (ENSNLEG00000007871) #26	ENSNLEG00000027392	ERAS (ENSNLEG00000018585) #28	PCSK1N (ENSNLEG00000007899) #29	ENSNLEG00000007902 #30	PQBP1 (ENSNLEG00000007912) #31	SLC35A2 (ENSNLEG00000007922) #32	PIM2 (ENSNLEG00000007927) #33	OTUD5 (ENSNLEG00000031362) #34	KCND1 (ENSNLEG00000007958) #35	GRIPAP1 (ENSNLEG00000007939) #36	TFE3 (ENSNLEG00000007963) #37	CCDC120 (ENSNLEG00000007975)
Cercopithecidae	ANCESTRAL SPECIES	27	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484.e.b.a ##13	ENSGT00390000012484.f.a.b.b.a.b.b ##13	ENSGT00390000012484.f.a.b.b.b.a ##13	ENSGT00630000089895.x #14	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00910000145701	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Rhinopithecus	ANCESTRAL SPECIES	311					ENSGT00390000012484.f.a.b.b.a.b.b ##13	ENSGT00390000012484.f.a.b.b.b.a ##13	ENSGT00630000089895.x #14	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00410000028756	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29
Golden snub-nosed monkey	MODERN SPECIES	929						ENSRROG00000005525 ##13	ENSRROG00000041177 ##13	ENSRROG00000030999 #14	SLC38A5 (ENSRROG00000040266) #15	FTSJ1 (ENSRROG00000029757) #16	PORCN (ENSRROG00000034839) #17	EBP (ENSRROG00000044857) #18	TBC1D25 (ENSRROG00000028357) #19	RBM3 (ENSRROG00000034767) #20	WDR13 (ENSRROG00000041479) #21	WAS (ENSRROG00000041272) #22	SUV39H1 (ENSRROG00000031547) #23	GLOD5 (ENSRROG00000043719) #24	GATA1 (ENSRROG00000035063) #26	HDAC6 (ENSRROG00000043682) #27	ERAS (ENSRROG00000037990) #28	PCSK1N (ENSRROG00000042291) #29
Black snub-nosed monkey	MODERN SPECIES	1769																WAS (ENSRBIG00000044530) #22	SUV39H1 (ENSRBIG00000038736) #23	GLOD5 (ENSRBIG00000041226) #24	GATA1 (ENSRBIG00000026904) #26	HDAC6 (ENSRBIG00000029142) #27	ERAS (ENSRBIG00000026594) #28	PCSK1N (ENSRBIG00000033130) #29
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT00390000012484.f.a.b.b.a.a #13	ENSGT00390000012484.e.a #10	ENSGT00390000012484.f.a.b.a ##13	ENSGT00390000012484.f.a.b.b.a.b.b ##13	ENSGT00390000012484.f.a.b.b.b.a ##13	ENSGT00630000089895.x #14	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00910000145701	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Vervet Monkey	MODERN SPECIES	203	ENSCSAG00000013527 ##13	ENSCSAG00000013463 ##13	ENSCSAG00000013441 ##13	ENSCSAG00000013411 #13	SSX1 (ENSCSAG00000013387) #10	ENSCSAG00000013354 ##13	ENSCSAG00000013341 ##13	ENSCSAG00000013311 ##13	SLC38A5 (ENSCSAG00000013284) #15	FTSJ1 (ENSCSAG00000013278) #16	PORCN (ENSCSAG00000013270) #17	EBP (ENSCSAG00000013263) #18	TBC1D25 (ENSCSAG00000013246) #19	RBM3 (ENSCSAG00000013242) #20	WDR13 (ENSCSAG00000013235) #21	WAS (ENSCSAG00000013227) #22	SUV39H1 (ENSCSAG00000013221) #23	GLOD5 (ENSCSAG00000013213) #24	GATA1 (ENSCSAG00000013203) #26	HDAC6 (ENSCSAG00000013197) #27	ERAS (ENSCSAG00000019564) #28	PCSK1N (ENSCSAG00000013181) #29	TIMM17B (ENSCSAG00000013171) #30	PQBP1 (ENSCSAG00000013159) #31	SLC35A2 (ENSCSAG00000013155) #32	PIM2 (ENSCSAG00000013149) #33	OTUD5 (ENSCSAG00000013145) #34	KCND1 (ENSCSAG00000013138) #35	GRIPAP1 (ENSCSAG00000013107) #36	TFE3 (ENSCSAG00000013021) #37	CCDC120 (ENSCSAG00000013004)
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00390000012484.f.a.b.b.b.b ##13	ENSGT00390000012484.f.a.b.a ##13	ENSGT00390000012484.f.a.b.b.a.b.b ##13	ENSGT00390000012484.f.a.b.b.b.a ##13	ENSGT00630000089895.x #14	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a.l #20	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.a.a.k.b #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00910000145701	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Cercopithecinae_b	ANCESTRAL SPECIES	44	ENSGT00940000163698 #8	ENSGT00390000012484.e.b.a ##13	ENSGT00390000012484.e.a #10	ENSGT00390000012484.f.a.a.a.b ##13	ENSGT00390000012484.f.a.b.b.b.b ##13	ENSGT00390000012484.f.a.b.a ##13	ENSGT00390000012484.f.a.b.b.a.b.b ##13	ENSGT00390000012484.f.a.b.b.b.a ##13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a.l #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Olive baboon	MODERN SPECIES	792	ZNF630 (ENSPANG00000035496) #8	ENSPANG00000037381 ##13	ENSPANG00000044111 #10	ENSPANG00000038999 #10	ENSPANG00000016327 ##13	ENSPANG00000045359 ##13	ENSPANG00000031810 ##13	ENSPANG00000048115 ##13	SLC38A5 (ENSPANG00000002527) #15	FTSJ1 (ENSPANG00000010102) #16	PORCN (ENSPANG00000003150) #17	EBP (ENSPANG00000012369) #18	TBC1D25 (ENSPANG00000010723) #19	RBM3 (ENSPANG00000034727) #20	WDR13 (ENSPANG00000012952) #21	WAS (ENSPANG00000005276) #22	SUV39H1 (ENSPANG00000004841) #23	GLOD5 (ENSPANG00000035690) #24	GATA1 (ENSPANG00000017368) #26	HDAC6 (ENSPANG00000007274) #27	ERAS (ENSPANG00000018181) #28	PCSK1N (ENSPANG00000015256) #29	TIMM17B (ENSPANG00000015318) #30	PQBP1 (ENSPANG00000013632) #31	SLC35A2 (ENSPANG00000003149) #32	PIM2 (ENSPANG00000009952) #33	OTUD5 (ENSPANG00000023327) #34	KCND1 (ENSPANG00000003598) #35	GRIPAP1 (ENSPANG00000013631) #36	TFE3 (ENSPANG00000013676) #37	CCDC120 (ENSPANG00000003148)
Cercopithecinae_d	ANCESTRAL SPECIES	76	ENSGT00940000163698 #8	ENSGT00390000012484.e.b.a ##13	ENSGT00390000012484.e.a #10	ENSGT00390000012484.f.a.a.a.b ##13	ENSGT00390000012484.f.a.b.b.b.b ##13	ENSGT00390000012484.f.a.a.a.a ##13	ENSGT00390000012484.f.a.b.a ##13	ENSGT00390000012484.f.a.b.b.b.a ##13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a.l #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Sooty mangabey	MODERN SPECIES	404															ENSCATG00000023593	WAS (ENSCATG00000044972) #22	SUV39H1 (ENSCATG00000036142) #23	GLOD5 (ENSCATG00000037814) #24	GATA1 (ENSCATG00000025362) #26	HDAC6 (ENSCATG00000043307) #27	ERAS (ENSCATG00000015662) #28	PCSK1N (ENSCATG00000036843) #29	TIMM17B (ENSCATG00000035492) #30	PQBP1 (ENSCATG00000044182) #31	SLC35A2 (ENSCATG00000040690) #32	PIM2 (ENSCATG00000038525) #33	OTUD5 (ENSCATG00000033103) #34	KCND1 (ENSCATG00000011996) #35	GRIPAP1 (ENSCATG00000024072) #36	TFE3 (ENSCATG00000029548) #37	CCDC120 (ENSCATG00000030130)
Drill	MODERN SPECIES	1065			ENSMLEG00000039250 #10	ENSMLEG00000024868 ##13	ENSMLEG00000043485 ##13	ENSMLEG00000027842 ##13	ENSMLEG00000036553 ##13	ENSMLEG00000012610 ##13	SLC38A5 (ENSMLEG00000029237) #15	FTSJ1 (ENSMLEG00000016789) #16	PORCN (ENSMLEG00000043224) #17	EBP (ENSMLEG00000037407) #18	TBC1D25 (ENSMLEG00000029669) #19	RBM3 (ENSMLEG00000041745) #20	WDR13 (ENSMLEG00000037784) #21	WAS (ENSMLEG00000032594) #22	SUV39H1 (ENSMLEG00000036097) #23	GLOD5 (ENSMLEG00000041222) #24	GATA1 (ENSMLEG00000031222) #26	HDAC6 (ENSMLEG00000036773) #27	ERAS (ENSMLEG00000027363) #28	TIMM17B (ENSMLEG00000039526) #30	PQBP1 (ENSMLEG00000028927) #31	SLC35A2 (ENSMLEG00000038781) #32	PIM2 (ENSMLEG00000029129) #33	OTUD5 (ENSMLEG00000041141) #34	KCND1 (ENSMLEG00000043942) #35	GRIPAP1 (ENSMLEG00000043249) #36	TFE3 (ENSMLEG00000037046) #37	ENSMLEG00000021075	CCDC120 (ENSMLEG00000035115)
Macaca	ANCESTRAL SPECIES	13	ENSGT00390000012484.f.a.a.a.b ##13	ENSGT00390000012484.f.a.b.b.b.b ##13	ENSGT00390000012484.f.a.b.a ##13	ENSGT00390000012484.f.a.b.b.a.b.b ##13	ENSGT00390000012484.f.a.b.b.b.a ##13	ENSGT00630000089895.x #14	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a.l #20	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00910000145701	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Pig-tailed macaque	MODERN SPECIES	207	ENSMNEG00000035857 ##13	ENSMNEG00000044952 ##13	ENSMNEG00000044669 #12	ENSMNEG00000004758 ##13	ENSMNEG00000025570 ##13	ENSMNEG00000043125 ##13	ENSMNEG00000037873 ##13	ENSMNEG00000031459 #14	SLC38A5 (ENSMNEG00000040455) #15	FTSJ1 (ENSMNEG00000044348) #16	PORCN (ENSMNEG00000031731) #17	EBP (ENSMNEG00000028360) #18	TBC1D25 (ENSMNEG00000044146) #19	RBM3 (ENSMNEG00000042115) #20	WDR13 (ENSMNEG00000033698) #21	WAS (ENSMNEG00000034263) #22	SUV39H1 (ENSMNEG00000013732) #23	GLOD5 (ENSMNEG00000029463) #24	GATA1 (ENSMNEG00000043842) #26	HDAC6 (ENSMNEG00000045060) #27	ERAS (ENSMNEG00000004089) #28	PCSK1N (ENSMNEG00000035990) #29	TIMM17B (ENSMNEG00000038509) #30	PQBP1 (ENSMNEG00000035279) #31	SLC35A2 (ENSMNEG00000033235) #32	PIM2 (ENSMNEG00000036646) #33	OTUD5 (ENSMNEG00000042421) #34	KCND1 (ENSMNEG00000044552) #35	GRIPAP1 (ENSMNEG00000028228) #36	TFE3 (ENSMNEG00000034885) #37	CCDC120 (ENSMNEG00000033523)
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484.e.b.a ##13	ENSGT00390000012484.f.a.a.a.b ##13	ENSGT00390000012484.f.a.b.b.b.b ##13	ENSGT00390000012484.f.a.b.a ##13	ENSGT00390000012484.f.a.b.b.a.b.b ##13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00910000145701	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e.e.a #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Rhesus	MODERN SPECIES	327	ZNF81 (ENSMMUG00000014066) #7	ZNF182 (ENSMMUG00000001258)	ENSMMUG00000010883 #9	ENSMMUG00000014463 ##13	ENSMMUG00000041263 ##13	ENSMMUG00000010112 ##13	ENSMMUG00000046387 ##13	ENSMMUG00000056352 ##13	ENSMMUG00000058139 ##13	SLC38A5 (ENSMMUG00000016975) #15	FTSJ1 (ENSMMUG00000018894) #16	PORCN (ENSMMUG00000018895) #17	TBC1D25 (ENSMMUG00000018335) #19	ENSMMUG00000057508	WDR13 (ENSMMUG00000015396) #21	WAS (ENSMMUG00000019767) #22	SUV39H1 (ENSMMUG00000019768) #23	GLOD5 (ENSMMUG00000007505) #24	GATA1 (ENSMMUG00000016464) #26	HDAC6 (ENSMMUG00000016465) #27	ERAS (ENSMMUG00000016467) #28	PCSK1N (ENSMMUG00000016469) #29	TIMM17B (ENSMMUG00000004547) #30	PQBP1 (ENSMMUG00000004548) #31	SLC35A2 (ENSMMUG00000004553) #32	PIM2 (ENSMMUG00000053345) #33	OTUD5 (ENSMMUG00000004558) #34	KCND1 (ENSMMUG00000004559) #35	GRIPAP1 (ENSMMUG00000020059) #36	TFE3 (ENSMMUG00000023494) #37	CCDC120 (ENSMMUG00000010617)
Crab-eating macaque	MODERN SPECIES	175	ENSMFAG00000033029 ##13	ENSMFAG00000035694 ##13	ENSMFAG00000000046 ##13	ENSMFAG00000055371 ##13	ENSMFAG00000045384 ##13	ENSMFAG00000061797 ##13	ENSMFAG00000044497 ##13	SLC38A5 (ENSMFAG00000000065) #15	FTSJ1 (ENSMFAG00000003467) #16	PORCN (ENSMFAG00000035976) #17	EBP (ENSMFAG00000037811) #18	TBC1D25 (ENSMFAG00000045738) #19	ENSMFAG00000049521	ENSMFAG00000003694	WDR13 (ENSMFAG00000038642) #21	WAS (ENSMFAG00000034169) #22	SUV39H1 (ENSMFAG00000042131) #23	GLOD5 (ENSMFAG00000042609) #24	GATA1 (ENSMFAG00000031953) #26	ENSMFAG00000047907	HDAC6 (ENSMFAG00000044074) #27	ERAS (ENSMFAG00000018924) #28	TIMM17B (ENSMFAG00000000862) #30	PQBP1 (ENSMFAG00000029786) #31	SLC35A2 (ENSMFAG00000046212) #32	PIM2 (ENSMFAG00000032689) #33	ENSMFAG00000061294	OTUD5 (ENSMFAG00000039347) #34	ENSMFAG00000032065 #35	GRIPAP1 (ENSMFAG00000002305) #36	ENSMFAG00000055468
Platyrrhini	ANCESTRAL SPECIES	28	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484.g #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00910000145701.b	ENSGT00940000159563.m #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C.i #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Cebidae	ANCESTRAL SPECIES	18	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484.g #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00910000145701.b	ENSGT00940000159563.m #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C.i #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Marmoset	MODERN SPECIES	78	ELK1 (ENSCJAG00000034978)	UXT (ENSCJAG00000015636)	ZNF81 (ENSCJAG00000015620) #7	ZNF182 (ENSCJAG00000048633)	ENSCJAG00000015593 #9	ENSCJAG00000081387 #8	ENSCJAG00000014776 #13	SLC38A5 (ENSCJAG00000014797) #15	FTSJ1 (ENSCJAG00000002256) #16	PORCN (ENSCJAG00000002259) #17	EBP (ENSCJAG00000002295) #18	TBC1D25 (ENSCJAG00000002300) #19	RBM3 (ENSCJAG00000047341) #20	WDR13 (ENSCJAG00000002328) #21	ENSCJAG00000073077	WAS (ENSCJAG00000002365) #22	SUV39H1 (ENSCJAG00000002376) #23	GLOD5 (ENSCJAG00000042238) #24	GATA1 (ENSCJAG00000040521) #26	ENSCJAG00000077383	HDAC6 (ENSCJAG00000002395) #27	ERAS (ENSCJAG00000040987) #28	PCSK1N (ENSCJAG00000047969) #29	TIMM17B (ENSCJAG00000002426) #30	PQBP1 (ENSCJAG00000002452) #31	SLC35A2 (ENSCJAG00000002479) #32	OTUD5 (ENSCJAG00000002507) #34	KCND1 (ENSCJAG00000002523) #35	GRIPAP1 (ENSCJAG00000002531) #36	ENSCJAG00000084243	CCDC120 (ENSCJAG00000002605)
Cebidae_a	ANCESTRAL SPECIES	64	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484.g #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563.m #27	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C.i #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00940000155657
Capuchin	MODERN SPECIES	30	TM4SF18 (ENSCCAG00000024188)	TM4SF1 (ENSCCAG00000033032)	TM4SF4 (ENSCCAG00000028225)	WWTR1 (ENSCCAG00000033257)	COMMD2 (ENSCCAG00000030153)	ENSCCAG00000024462	ANKUB1 (ENSCCAG00000032570)	ENSCCAG00000020698 #13	SLC38A5 (ENSCCAG00000032976) #15	FTSJ1 (ENSCCAG00000027731) #16	PORCN (ENSCCAG00000035069) #17	EBP (ENSCCAG00000027079) #18	TBC1D25 (ENSCCAG00000033507) #19	RBM3 (ENSCCAG00000038019) #20	WDR13 (ENSCCAG00000038091) #21	WAS (ENSCCAG00000036792) #22	ENSCCAG00000001345	SUV39H1 (ENSCCAG00000004739) #23	GLOD5 (ENSCCAG00000033598) #24	GATA1 (ENSCCAG00000032671) #26	ENSCCAG00000037521 #27	PCSK1N (ENSCCAG00000032016) #29	TIMM17B (ENSCCAG00000030275) #30	PQBP1 (ENSCCAG00000034951) #31	SLC35A2 (ENSCCAG00000025257) #32	PIM2 (ENSCCAG00000024329) #33	OTUD5 (ENSCCAG00000033387) #34	KCND1 (ENSCCAG00000037150) #35	GRIPAP1 (ENSCCAG00000003776) #36
Bolivian squirrel monkey	MODERN SPECIES	157	ELK1 (ENSSBOG00000027047)	UXT (ENSSBOG00000021707)	ENSSBOG00000021078	ZNF81 (ENSSBOG00000020798) #7	ZNF182 (ENSSBOG00000020007)	ENSSBOG00000027716 #9	ZNF630 (ENSSBOG00000026832) #8	ENSSBOG00000031724 #13	SLC38A5 (ENSSBOG00000028771) #15	FTSJ1 (ENSSBOG00000028146) #16	PORCN (ENSSBOG00000023287) #17	EBP (ENSSBOG00000032355) #18	TBC1D25 (ENSSBOG00000032876) #19	ENSSBOG00000032527	WDR13 (ENSSBOG00000035999) #21	WAS (ENSSBOG00000032308) #22	SUV39H1 (ENSSBOG00000003145) #23	GLOD5 (ENSSBOG00000035107) #24	GATA1 (ENSSBOG00000020278) #26	ENSSBOG00000023772 #27	PCSK1N (ENSSBOG00000035004) #29	TIMM17B (ENSSBOG00000029876) #30	PQBP1 (ENSSBOG00000024905) #31	SLC35A2 (ENSSBOG00000025776) #32	PIM2 (ENSSBOG00000013515) #33	OTUD5 (ENSSBOG00000006541) #34	KCND1 (ENSSBOG00000026039) #35	GRIPAP1 (ENSSBOG00000036112) #36	TFE3 (ENSSBOG00000035668) #37	CCDC120 (ENSSBOG00000017789)	WDR45 (ENSSBOG00000020972)
Mas night monkey	MODERN SPECIES	1206									SLC38A5 (ENSANAG00000019713) #15	ENSANAG00000030571 #16	PORCN (ENSANAG00000035750) #17	EBP (ENSANAG00000037612) #18	TBC1D25 (ENSANAG00000024436) #19	ENSANAG00000028883 #20	WDR13 (ENSANAG00000029097) #21	WAS (ENSANAG00000007111) #22	SUV39H1 (ENSANAG00000022001) #23	GLOD5 (ENSANAG00000022210) #24	GATA1 (ENSANAG00000032139) #26	HDAC6 (ENSANAG00000021233) #27	PCSK1N (ENSANAG00000031176) #29	TIMM17B (ENSANAG00000030275) #30	ENSANAG00000027490 #31	SLC35A2 (ENSANAG00000037954) #32	PIM2 (ENSANAG00000025623) #33	OTUD5 (ENSANAG00000033729) #34	KCND1 (ENSANAG00000027103) #35	GRIPAP1 (ENSANAG00000036795) #36	TFE3 (ENSANAG00000037525) #37	CCDC120 (ENSANAG00000021812)	WDR45 (ENSANAG00000036620)
Tarsier	MODERN SPECIES	2960																WAS (ENSTSYG00000035826) #22	SUV39H1 (ENSTSYG00000004616) #23
Strepsirrhini	ANCESTRAL SPECIES	23	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b.ab.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT01100000263546.d.b.a.a.a.b	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Lemuriformes	ANCESTRAL SPECIES	46	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146.o #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b.ab.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT01100000263546.d.b.a.a.a.b	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Lemuriformes_a	ANCESTRAL SPECIES	85	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146.o #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b.ab.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT01100000263546.d.b.a.a.a.b	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Coquerels sifaka	MODERN SPECIES	532	ELK1 (ENSPCOG00000002923)	UXT (ENSPCOG00000017019)	ZNF81 (ENSPCOG00000019656) #7	ENSPCOG00000021977	ZNF182 (ENSPCOG00000017106)	ENSPCOG00000028526	ENSPCOG00000025673 #9	ZNF630 (ENSPCOG00000014197) #8	SLC38A5 (ENSPCOG00000028146) #15	ENSPCOG00000018822 #16	PORCN (ENSPCOG00000016355) #17	EBP (ENSPCOG00000019080) #18	TBC1D25 (ENSPCOG00000015204) #19	ENSPCOG00000014346 ##20	WDR13 (ENSPCOG00000010396) #21	WAS (ENSPCOG00000028712) #22	SUV39H1 (ENSPCOG00000025042) #23	BPIFA3 (ENSPCOG00000012476)	GLOD5 (ENSPCOG00000012991) #24	GATA1 (ENSPCOG00000021788) #26	HDAC6 (ENSPCOG00000027534) #27	PCSK1N (ENSPCOG00000012912) #29	ENSPCOG00000013555 #30	PQBP1 (ENSPCOG00000013610) #31	SLC35A2 (ENSPCOG00000023683) #32	PIM2 (ENSPCOG00000016885) #33	OTUD5 (ENSPCOG00000015759) #34	KCND1 (ENSPCOG00000020985) #35	GRIPAP1 (ENSPCOG00000020199) #36	TFE3 (ENSPCOG00000027417) #37	CCDC120 (ENSPCOG00000014281)
Mouse lemur	MODERN SPECIES	169	ENSMICG00000001433	ZNF81 (ENSMICG00000037260) #7	ENSMICG00000032436	ZNF182 (ENSMICG00000037147)	ENSMICG00000042910	ENSMICG00000044570 #9	ENSMICG00000034553	ENSMICG00000045282 #13	SLC38A5 (ENSMICG00000013083) #15	PORCN (ENSMICG00000013105) #17	EBP (ENSMICG00000037008) #18	TBC1D25 (ENSMICG00000013126) #19	ENSMICG00000030860	ENSMICG00000047440 ##20	WDR13 (ENSMICG00000012548) #21	WAS (ENSMICG00000035528) #22	SUV39H1 (ENSMICG00000014379) #23	BPIFA3 (ENSMICG00000045437)	GLOD5 (ENSMICG00000029182) #24	ENSMICG00000046068	GATA1 (ENSMICG00000032208) #26	HDAC6 (ENSMICG00000005955) #27	PCSK1N (ENSMICG00000030219) #29	ENSMICG00000045125	ENSMICG00000042454	TIMM17B (ENSMICG00000005971) #30	PQBP1 (ENSMICG00000005973) #31	SLC35A2 (ENSMICG00000005976) #32	PIM2 (ENSMICG00000043000) #33	OTUD5 (ENSMICG00000005989) #34	KCND1 (ENSMICG00000033913) #35
Bushbaby	MODERN SPECIES	268	CFP (ENSOGAG00000011605)	ELK1 (ENSOGAG00000011608)	UXT (ENSOGAG00000011611)	ZNF81 (ENSOGAG00000014983) #7	ENSOGAG00000030385	ENSOGAG00000004403	ENSOGAG00000030057 #9	ENSOGAG00000034309 #13	SLC38A5 (ENSOGAG00000026543) #15	ENSOGAG00000016174 #16	PORCN (ENSOGAG00000030340) #17	EBP (ENSOGAG00000016187) #18	TBC1D25 (ENSOGAG00000034911) #19	RBM3 (ENSOGAG00000026654) ##20	WDR13 (ENSOGAG00000016193) #21	WAS (ENSOGAG00000003288) #22	SUV39H1 (ENSOGAG00000033074) #23	BPIFA3 (ENSOGAG00000027244)	GLOD5 (ENSOGAG00000013859) #24	GATA1 (ENSOGAG00000025595) #26	HDAC6 (ENSOGAG00000013860) #27	ERAS (ENSOGAG00000008196) #28	PCSK1N (ENSOGAG00000034785) #29	TIMM17B (ENSOGAG00000009604) #30	PQBP1 (ENSOGAG00000009606) #31	SLC35A2 (ENSOGAG00000009610) #32	PIM2 (ENSOGAG00000009613) #33	ENSOGAG00000009614 #34	KCND1 (ENSOGAG00000026877) #35	GRIPAP1 (ENSOGAG00000032089) #36	TFE3 (ENSOGAG00000031330) #37
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Glires	ANCESTRAL SPECIES	10	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Lagomorpha	ANCESTRAL SPECIES	43	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b
Rabbit	MODERN SPECIES	1401	ENSOCUG00000023087	ZNF81 (ENSOCUG00000029071) #7	ZNF182 (ENSOCUG00000017226)	ENSOCUG00000022732	LYZE (ENSOCUG00000002990) #9	ENSOCUG00000038971	ENSOCUG00000007996 #13	SLC38A5 (ENSOCUG00000008001) #15	ENSOCUG00000008009 #16	PORCN (ENSOCUG00000015293) #17	EBP (ENSOCUG00000015316) #18	TBC1D25 (ENSOCUG00000009251) #19	ENSOCUG00000002271 ##20	ENSOCUG00000000559	WDR13 (ENSOCUG00000014470) #21	WAS (ENSOCUG00000015393) #22	SUV39H1 (ENSOCUG00000003807) #23	GLOD5 (ENSOCUG00000008902) #24	GATA1 (ENSOCUG00000025597) #26	HDAC6 (ENSOCUG00000010141) #27	PCSK1N (ENSOCUG00000009021) #29	TIMM17B (ENSOCUG00000027418) #30	PQBP1 (ENSOCUG00000011703) #31	SLC35A2 (ENSOCUG00000011709) #32	ENSOCUG00000015757 #33	OTUD5 (ENSOCUG00000015767) #34	KCND1 (ENSOCUG00000015777) #35	GRIPAP1 (ENSOCUG00000015788) #36	TFE3 (ENSOCUG00000015807) #37	CCDC120 (ENSOCUG00000004644)	PRAF2 (ENSOCUG00000035406)
Rodentia	ANCESTRAL SPECIES	10	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Rodentia_B	ANCESTRAL SPECIES	31	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Muroidea	ANCESTRAL SPECIES	30	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00390000012484.c #13	ENSGT00390000012484.d #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000160244	ENSGT00390000003231.b	ENSGT00530000063186.a	ENSGT00950000182841.b.a.a.a.i.b	ENSGT00940000163515.j	ENSGT00950000182841.b.a.a.a.i.a	ENSGT00940000166424	ENSGT00390000012484.d #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00940000160244	ENSGT00390000003231.b	ENSGT00530000063186.a	ENSGT00950000182841.b.a.a.a.i.b	ENSGT00940000163515.j	ENSGT00950000182841.b.a.a.a.i.a	ENSGT00940000166424	ENSGT00390000012484.d #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Cricetinae	ANCESTRAL SPECIES	17	ENSGT00940000160244	ENSGT00390000003231.b	ENSGT00530000063186.a	ENSGT00950000182841.b.a.a.a.i.b	ENSGT00940000163515.j	ENSGT00950000182841.b.a.a.a.i.a	ENSGT00940000166424	ENSGT00390000012484.d #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Chinese hamster chok1gshd	MODERN SPECIES	175	Xk (ENSCGRG00001022297)	Lancl3 (ENSCGRG00001020578)	ENSCGRG00001001938	ENSCGRG00001004165	ENSCGRG00001010971	B630019K06Rik (ENSCGRG00001021404)	ENSCGRG00001021892 #13	ENSCGRG00001018882	Slc38a5 (ENSCGRG00001016687) #15	Ftsj1 (ENSCGRG00001023654) #16	Porcn (ENSCGRG00001021670) #17	Ebp (ENSCGRG00001001031) #18	Tbc1d25 (ENSCGRG00001018227) #19	Rbm3 (ENSCGRG00001018909) #20	Wdr13 (ENSCGRG00001001328) #21	Was (ENSCGRG00001012275) #22	Suv39h1 (ENSCGRG00001023557) #23	Glod5 (ENSCGRG00001014309) #24	ENSCGRG00001009581	Gata1 (ENSCGRG00001017719) #26	Hdac6 (ENSCGRG00001011507) #27	ENSCGRG00001001303 #28	Pcsk1n (ENSCGRG00001013577) #29	Timm17b (ENSCGRG00001010270) #30	Pqbp1 (ENSCGRG00001001371) #31	Slc35a2 (ENSCGRG00001000798) #32	Pim2 (ENSCGRG00001010240) #33	Otud5 (ENSCGRG00001016496) #34	Kcnd1 (ENSCGRG00001004134) #35	Gripap1 (ENSCGRG00001010183) #36	Tfe3 (ENSCGRG00001000716) #37
Golden Hamster	MODERN SPECIES	799									ENSMAUG00000017912	Slc38a5 (ENSMAUG00000000379) #15	Porcn (ENSMAUG00000004437) #17	ENSMAUG00000015656 #18	Tbc1d25 (ENSMAUG00000004232) #19	ENSMAUG00000016488 #20	Wdr13 (ENSMAUG00000009779) #21	Was (ENSMAUG00000000519) #22	Suv39h1 (ENSMAUG00000011289) #23	Glod5 (ENSMAUG00000008099) #24	ENSMAUG00000020294 #26	Hdac6 (ENSMAUG00000022133) #27	Eras (ENSMAUG00000003962) #28	Pcsk1n (ENSMAUG00000015797) #29	ENSMAUG00000016716 #30	ENSMAUG00000013093 #31	Slc35a2 (ENSMAUG00000015557) #32	Pim2 (ENSMAUG00000009222) #33	Otud5 (ENSMAUG00000015273) #34	Kcnd1 (ENSMAUG00000008332) #35	Gripap1 (ENSMAUG00000009161) #36	Tfe3 (ENSMAUG00000002865) #37	Ccdc120 (ENSMAUG00000000888)
Cricetidae_B	ANCESTRAL SPECIES	45	ENSGT00940000160244	ENSGT00390000003231.b	ENSGT00530000063186.a	ENSGT00950000182841.b.a.a.a.i.b	ENSGT00940000163515.j	ENSGT00950000182841.b.a.a.a.i.a	ENSGT00940000166424	ENSGT00390000012484.d #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Northern American deer mouse	MODERN SPECIES	475	Chst7 (ENSPEMG00000022504)	ENSPEMG00000001616	ENSPEMG00000001590	ENSPEMG00000025989	ENSPEMG00000026731	Dipk2b (ENSPEMG00000026275)	Kdm6a (ENSPEMG00000011007)	ENSPEMG00000028355	Slc38a5 (ENSPEMG00000012763) #15	ENSPEMG00000015698 #16	Porcn (ENSPEMG00000018381) #17	Ebp (ENSPEMG00000019215) #18	Tbc1d25 (ENSPEMG00000000481) #19	Rbm3 (ENSPEMG00000012411) #20	Wdr13 (ENSPEMG00000030841) #21	Was (ENSPEMG00000017673) #22	Suv39h1 (ENSPEMG00000012820) #23	Glod5 (ENSPEMG00000014471) #24	Gata1 (ENSPEMG00000010138) #26	Hdac6 (ENSPEMG00000002814) #27	Eras (ENSPEMG00000018814) #28	Pcsk1n (ENSPEMG00000017215) #29	Timm17b (ENSPEMG00000000361) #30	Pqbp1 (ENSPEMG00000015122) #31	Slc35a2 (ENSPEMG00000011729) #32	Pim2 (ENSPEMG00000010225) #33	Otud5 (ENSPEMG00000025054) #34	Kcnd1 (ENSPEMG00000003794) #35	Gripap1 (ENSPEMG00000010836) #36	Tfe3 (ENSPEMG00000013183) #37	Ccdc120 (ENSPEMG00000027723)
Prairie vole	MODERN SPECIES	1	Sytl5 (ENSMOCG00000020078)	Dynlt3 (ENSMOCG00000013937)	ENSMOCG00000005328	ENSMOCG00000002347	Xk (ENSMOCG00000021048)	Lancl3 (ENSMOCG00000018888)	ENSMOCG00000015166 #13	Slc38a5 (ENSMOCG00000015897) #15	ENSMOCG00000000507 #16	ENSMOCG00000008118	Porcn (ENSMOCG00000012499) #17	Ebp (ENSMOCG00000010008) #18	Tbc1d25 (ENSMOCG00000006324) #19	Rbm3 (ENSMOCG00000001511) #20	Wdr13 (ENSMOCG00000000752) #21	Was (ENSMOCG00000022215) #22	Suv39h1 (ENSMOCG00000013532) #23	Glod5 (ENSMOCG00000018812) #24	Gata1 (ENSMOCG00000018101) #26	Hdac6 (ENSMOCG00000022461) #27	Eras (ENSMOCG00000017489) #28	Pcsk1n (ENSMOCG00000016403) #29	Timm17b (ENSMOCG00000022137) #30	Pqbp1 (ENSMOCG00000020123) #31	Slc35a2 (ENSMOCG00000015110) #32	Pim2 (ENSMOCG00000005351) #33	Otud5 (ENSMOCG00000011416) #34	ENSMOCG00000018971	Kcnd1 (ENSMOCG00000002342) #35	Gripap1 (ENSMOCG00000007615) #36	Tfe3 (ENSMOCG00000013907) #37
Murinae	ANCESTRAL SPECIES	33	ENSGT00940000162492	ENSGT00390000003231.b	ENSGT00530000063186.a	ENSGT00950000182841.b.a.a.a.i.b	ENSGT00940000163515.j	ENSGT00950000182841.b.a.a.a.i.a.a	ENSGT00940000166424	ENSGT00390000012484.d #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Mus	ANCESTRAL SPECIES	9	ENSGT00940000155009	ENSGT00940000160244	ENSGT00940000162492	ENSGT00390000003231.b	ENSGT00530000063186.a	ENSGT00950000182841.b.a.a.a.i.a.a	ENSGT00940000166424	ENSGT00390000012484.d #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Mus_A	ANCESTRAL SPECIES	15	ENSGT00940000160244	ENSGT00940000162492.h	ENSGT00390000003231.b	ENSGT00530000063186.a	ENSGT00940000169466	ENSGT00950000182841.b.a.a.a.i.a.a	ENSGT00940000166424	ENSGT00390000012484.d #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Mus_B	ANCESTRAL SPECIES	14	ENSGT00940000162492.g.b.a.a.a.a	ENSGT00390000003231.b	ENSGT00530000063186.a	ENSGT00940000169466	ENSGT00950000182841.b.a.a.a.i.a.a	ENSGT00940000166424	ENSGT00390000012484.d.e.a.b #13	ENSGT00390000012484.d.e.a.a.a.a.a.a.a.a.a #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Mouse	MODERN SPECIES	37	Ssxb8 (ENSMUSG00000079703) #13	Ssxb3 (ENSMUSG00000079701) #13	Ssxb6 (ENSMUSG00000079702) #13	Gm14459 (ENSMUSG00000079704) #13	Ssxb2 (ENSMUSG00000023165) #13	Ssxb1 (ENSMUSG00000079705) #13	Ssxb9 (ENSMUSG00000068218) #13	Ssxb10 (ENSMUSG00000068219) #13	Slc38a5 (ENSMUSG00000031170) #15	Ftsj1 (ENSMUSG00000031171) #16	Porcn (ENSMUSG00000031169) #17	Ebp (ENSMUSG00000031168) #18	Tbc1d25 (ENSMUSG00000039201) #19	Rbm3 (ENSMUSG00000031167) #20	Wdr13 (ENSMUSG00000031166) #21	Was (ENSMUSG00000031165) #22	Suv39h1 (ENSMUSG00000039231) #23	Glod5 (ENSMUSG00000031163) #24	Gata1 (ENSMUSG00000031162) #26	Hdac6 (ENSMUSG00000031161) #27	Eras (ENSMUSG00000031160) #28	Pcsk1n (ENSMUSG00000039278) #29	Timm17b (ENSMUSG00000031158) #30	Pqbp1 (ENSMUSG00000031157) #31	Slc35a2 (ENSMUSG00000031156) #32	Pim2 (ENSMUSG00000031155) #33	Otud5 (ENSMUSG00000031154) #34	Kcnd1 (ENSMUSG00000009731) #35	Gripap1 (ENSMUSG00000031153) #36	Tfe3 (ENSMUSG00000000134) #37	Ccdc120 (ENSMUSG00000031150)
Mus_C	ANCESTRAL SPECIES	27	ENSGT00940000162492.h	ENSGT00940000160244	ENSGT00390000003231.b	ENSGT00860000135843	ENSGT00530000063186.a	ENSGT00940000169466	ENSGT00950000182841.b.a.a.a.i.a.a	ENSGT00940000166424	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
spretus	MODERN SPECIES	19	Cybb (MGP_SPRETEiJ_G0034076)	Xk (MGP_SPRETEiJ_G0034075)	MGP_SPRETEiJ_G0034074	Lancl3 (MGP_SPRETEiJ_G0034073)	4930402K13Rik (MGP_SPRETEiJ_G0034072)	MGP_SPRETEiJ_G0034071	MGP_SPRETEiJ_G0034070	B630019K06Rik (MGP_SPRETEiJ_G0034069)	Slc38a5 (MGP_SPRETEiJ_G0034068) #15	Ftsj1 (MGP_SPRETEiJ_G0034067) #16	Porcn (MGP_SPRETEiJ_G0034066) #17	Ebp (MGP_SPRETEiJ_G0034065) #18	Tbc1d25 (MGP_SPRETEiJ_G0034064) #19	Rbm3 (MGP_SPRETEiJ_G0034063) #20	Wdr13 (MGP_SPRETEiJ_G0034062) #21	Was (MGP_SPRETEiJ_G0034061) #22	Suv39h1 (MGP_SPRETEiJ_G0034060) #23	Glod5 (MGP_SPRETEiJ_G0034059) #24	Gata1 (MGP_SPRETEiJ_G0034058) #26	Hdac6 (MGP_SPRETEiJ_G0034057) #27	Eras (MGP_SPRETEiJ_G0034056) #28	Pcsk1n (MGP_SPRETEiJ_G0034055) #29	MGP_SPRETEiJ_G0034054	MGP_SPRETEiJ_G0034053	Timm17b (MGP_SPRETEiJ_G0034052) #30	Pqbp1 (MGP_SPRETEiJ_G0034051) #31	MGP_SPRETEiJ_G0034050 #32	Pim2 (MGP_SPRETEiJ_G0034049) #33	Otud5 (MGP_SPRETEiJ_G0034048) #34	Kcnd1 (MGP_SPRETEiJ_G0034047) #35	Gripap1 (MGP_SPRETEiJ_G0034046) #36
Ryukyu mouse	MODERN SPECIES	19	H2ap (MGP_CAROLIEiJ_G0032927)	Dynlt3 (MGP_CAROLIEiJ_G0032926)	Cybb (MGP_CAROLIEiJ_G0032925)	MGP_CAROLIEiJ_G0032924	MGP_CAROLIEiJ_G0032923	Lancl3 (MGP_CAROLIEiJ_G0032922)	4930402K13Rik (MGP_CAROLIEiJ_G0032921)	B630019K06Rik (MGP_CAROLIEiJ_G0032920)	Slc38a5 (MGP_CAROLIEiJ_G0032919) #15	Ftsj1 (MGP_CAROLIEiJ_G0032918) #16	Porcn (MGP_CAROLIEiJ_G0032917) #17	Ebp (MGP_CAROLIEiJ_G0032916) #18	Tbc1d25 (MGP_CAROLIEiJ_G0032915) #19	MGP_CAROLIEiJ_G0032914 #20	Wdr13 (MGP_CAROLIEiJ_G0032913) #21	Was (MGP_CAROLIEiJ_G0032912) #22	Suv39h1 (MGP_CAROLIEiJ_G0032911) #23	Glod5 (MGP_CAROLIEiJ_G0032910) #24	Gata1 (MGP_CAROLIEiJ_G0032909) #26	Hdac6 (MGP_CAROLIEiJ_G0032908) #27	Eras (MGP_CAROLIEiJ_G0032907) #28	Pcsk1n (MGP_CAROLIEiJ_G0032906) #29	MGP_CAROLIEiJ_G0032905	Timm17b (MGP_CAROLIEiJ_G0032904) #30	Pqbp1 (MGP_CAROLIEiJ_G0032903) #31	Slc35a2 (MGP_CAROLIEiJ_G0032902) #32	Pim2 (MGP_CAROLIEiJ_G0032901) #33	Otud5 (MGP_CAROLIEiJ_G0032900) #34	Kcnd1 (MGP_CAROLIEiJ_G0032899) #35	Gripap1 (MGP_CAROLIEiJ_G0032898) #36	Tfe3 (MGP_CAROLIEiJ_G0032897) #37
Shrew mouse	MODERN SPECIES	23	Sytl5 (MGP_PahariEiJ_G0031476)	MGP_PahariEiJ_G0031475	H2ap (MGP_PahariEiJ_G0031474)	Dynlt3 (MGP_PahariEiJ_G0031473)	Cybb (MGP_PahariEiJ_G0031472)	MGP_PahariEiJ_G0031471	Lancl3 (MGP_PahariEiJ_G0031470)	B630019K06Rik (MGP_PahariEiJ_G0031469)	Slc38a5 (MGP_PahariEiJ_G0031468) #15	Ftsj1 (MGP_PahariEiJ_G0031467) #16	Porcn (MGP_PahariEiJ_G0031466) #17	Ebp (MGP_PahariEiJ_G0031465) #18	Tbc1d25 (MGP_PahariEiJ_G0031464) #19	Rbm3 (MGP_PahariEiJ_G0031463) #20	Wdr13 (MGP_PahariEiJ_G0031462) #21	Was (MGP_PahariEiJ_G0031461) #22	Suv39h1 (MGP_PahariEiJ_G0031460) #23	Glod5 (MGP_PahariEiJ_G0031459) #24	Gata1 (MGP_PahariEiJ_G0031458) #26	Hdac6 (MGP_PahariEiJ_G0031457) #27	Eras (MGP_PahariEiJ_G0031456) #28	Pcsk1n (MGP_PahariEiJ_G0031455) #29	MGP_PahariEiJ_G0031453	Pqbp1 (MGP_PahariEiJ_G0031451) #31	Slc35a2 (MGP_PahariEiJ_G0031450) #32	Pim2 (MGP_PahariEiJ_G0031449) #33	Otud5 (MGP_PahariEiJ_G0031448) #34	Kcnd1 (MGP_PahariEiJ_G0031447) #35	Gripap1 (MGP_PahariEiJ_G0031446) #36	Tfe3 (MGP_PahariEiJ_G0031445) #37	Ccdc120 (MGP_PahariEiJ_G0031444)
Rat	MODERN SPECIES	46	RGD1561106 (ENSRNOG00000063120)	LOC120099305 (ENSRNOG00000063778)	LOC102552474 (ENSRNOG00000039615)	LOC120099271 (ENSRNOG00000066456)	LOC691895 (ENSRNOG00000063709)	ENSRNOG00000063832	RGD1560784 (ENSRNOG00000032522)	Ssx1 (ENSRNOG00000027850) #13	Slc38a5 (ENSRNOG00000027767) #15	Ftsj1 (ENSRNOG00000004776) #16	Porcn (ENSRNOG00000004819) #17	Ebp (ENSRNOG00000004903) #18	Tbc1d25 (ENSRNOG00000005303) #19	Rbm3 (ENSRNOG00000005387) #20	Wdr13 (ENSRNOG00000039587) #21	Was (ENSRNOG00000031058) #22	Suv39h1 (ENSRNOG00000039576) #23	Glod5 (ENSRNOG00000039571) #24	ENSRNOG00000064215	Gata1 (ENSRNOG00000047663) #26	Hdac6 (ENSRNOG00000048738) #27	Eras (ENSRNOG00000042470) #28	Pcsk1n (ENSRNOG00000046021) #29	Timm17b (ENSRNOG00000063664) #30	Pqbp1 (ENSRNOG00000007766) #31	Slc35a2 (ENSRNOG00000024801) #32	Pim2 (ENSRNOG00000008177) #33	Otud5 (ENSRNOG00000008764) #34	Kcnd1 (ENSRNOG00000039544) #35	Gripap1 (ENSRNOG00000009071) #36	Tfe3 (ENSRNOG00000009605) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1197	Timp1 (ENSNGAG00000012630)	Cfp (ENSNGAG00000014488)	ENSNGAG00000000443	Uxt (ENSNGAG00000000648)	ENSNGAG00000019509 #7	Zfp182 (ENSNGAG00000015598)	Spaca5 (ENSNGAG00000017226) #9	Zfp300 (ENSNGAG00000017614)	ENSNGAG00000018992 #13	ENSNGAG00000018629 #16	Porcn (ENSNGAG00000013300) #17	Ebp (ENSNGAG00000011873) #18	Tbc1d25 (ENSNGAG00000015501) #19	Rbm3 (ENSNGAG00000012951) ##20	Wdr13 (ENSNGAG00000020114) #21	Was (ENSNGAG00000021049) #22	Suv39h1 (ENSNGAG00000006669) #23	ENSNGAG00000009725	Glod5 (ENSNGAG00000012845) #24	ENSNGAG00000001174	Gata1 (ENSNGAG00000006537) #26	ENSNGAG00000011503	Hdac6 (ENSNGAG00000012074) #27	Eras (ENSNGAG00000014397) #28	Pcsk1n (ENSNGAG00000014688) #29	Timm17b (ENSNGAG00000016630) #30	ENSNGAG00000019854 #31	Slc35a2 (ENSNGAG00000020201) #32	Pim2 (ENSNGAG00000001210) #33	Otud5 (ENSNGAG00000020154) #34	Kcnd1 (ENSNGAG00000013998) #35
Lesser Egyptian jerboa	MODERN SPECIES	260										ENSJJAG00000014517 #16	Porcn (ENSJJAG00000013295) #17	Ebp (ENSJJAG00000012561) #18	Tbc1d25 (ENSJJAG00000011492) #19	Rbm3 (ENSJJAG00000012962) #20	Wdr13 (ENSJJAG00000012912) #21	Was (ENSJJAG00000012369) #22	Suv39h1 (ENSJJAG00000012070) #23
Kangaroo rat	MODERN SPECIES	473										Ftsj1 (ENSDORG00000000074) #16	Porcn (ENSDORG00000003798) #17	ENSDORG00000026687 #18	Tbc1d25 (ENSDORG00000000180) #19	Rbm3 (ENSDORG00000000182) #20	Wdr13 (ENSDORG00000026630) #21	Was (ENSDORG00000004951) #22	Suv39h1 (ENSDORG00000025898) #23	Glod5 (ENSDORG00000027963) #24	Gata1 (ENSDORG00000028973) #26	Pcsk1n (ENSDORG00000007957) #29	Timm17b (ENSDORG00000002655) #30	Pqbp1 (ENSDORG00000002656) #31	Slc35a2 (ENSDORG00000002657) #32	Pim2 (ENSDORG00000023524) #33	Otud5 (ENSDORG00000002659) #34	Kcnd1 (ENSDORG00000002661) #35	Gripap1 (ENSDORG00000002663) #36	Tfe3 (ENSDORG00000026289) #37	Ccdc120 (ENSDORG00000013934)	Praf2 (ENSDORG00000024385)	ENSDORG00000013938
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Hystricomorpha	ANCESTRAL SPECIES	11	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a.ab #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b
Hystricomorpha_a	ANCESTRAL SPECIES	56	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a.ab #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b
Hystricomorpha_b	ANCESTRAL SPECIES	81	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a.ab #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b
Long-tailed chinchilla	MODERN SPECIES	250								SLC38A5 (ENSCLAG00000004049) #15	FTSJ1 (ENSCLAG00000011582) #16	PORCN (ENSCLAG00000015764) #17	EBP (ENSCLAG00000002404) #18	TBC1D25 (ENSCLAG00000002644) #19	RBM3 (ENSCLAG00000002908) #20	WDR13 (ENSCLAG00000003526) #21	ENSCLAG00000003016	WAS (ENSCLAG00000003232) #22	SUV39H1 (ENSCLAG00000004044) #23	GLOD5 (ENSCLAG00000002227) #24	GATA1 (ENSCLAG00000002473) #26	HDAC6 (ENSCLAG00000002563) #27	PCSK1N (ENSCLAG00000003392) #29	TIMM17B (ENSCLAG00000003552) #30	PQBP1 (ENSCLAG00000004380) #31	SLC35A2 (ENSCLAG00000004591) #32	PIM2 (ENSCLAG00000005773) #33	OTUD5 (ENSCLAG00000006102) #34	KCND1 (ENSCLAG00000002203) #35	GRIPAP1 (ENSCLAG00000002364) #36	ENSCLAG00000017539	TFE3 (ENSCLAG00000002396) #37	CCDC120 (ENSCLAG00000003931)
Degu	MODERN SPECIES	96	UXT (ENSODEG00000009123)	ZNF81 (ENSODEG00000009602) #7	ENSODEG00000009466	ZNF182 (ENSODEG00000010486)	ENSODEG00000009058 #9	ENSODEG00000009360	ENSODEG00000019635	FTSJ1 (ENSODEG00000009855) #16	PORCN (ENSODEG00000008780) #17	ENSODEG00000009371 #18	TBC1D25 (ENSODEG00000009376) #19	ENSODEG00000019740	ENSODEG00000009372 #20	WDR13 (ENSODEG00000009758) #21	ENSODEG00000009972	WAS (ENSODEG00000009320) #22	SUV39H1 (ENSODEG00000010079) #23	ENSODEG00000009872 #24	ENSODEG00000011241	GATA1 (ENSODEG00000008814) #26	ENSODEG00000009461	PCSK1N (ENSODEG00000010528) #29	TIMM17B (ENSODEG00000010704) #30	ENSODEG00000008988 #31	SLC35A2 (ENSODEG00000009076) #32	PIM2 (ENSODEG00000009339) #33	OTUD5 (ENSODEG00000009050) #34	KCND1 (ENSODEG00000010342) #35	GRIPAP1 (ENSODEG00000009943) #36	ENSODEG00000009729
Guinea pig	MODERN SPECIES	132	CFP (ENSCPOG00000007256)	ELK1 (ENSCPOG00000009149)	UXT (ENSCPOG00000009154)	ZNF81 (ENSCPOG00000031196) #7	ZNF182 (ENSCPOG00000031427)	ENSCPOG00000032054 #9	ENSCPOG00000030434	ENSCPOG00000026336	ENSCPOG00000035952	FTSJ1 (ENSCPOG00000030576) #16	PORCN (ENSCPOG00000003541) #17	EBP (ENSCPOG00000014151) #18	TBC1D25 (ENSCPOG00000003548) #19	RBM3 (ENSCPOG00000003553) #20	WDR13 (ENSCPOG00000005101) #21	WAS (ENSCPOG00000023506) #22	SUV39H1 (ENSCPOG00000013555) #23	GLOD5 (ENSCPOG00000003997) #24	GATA1 (ENSCPOG00000007573) #26	HDAC6 (ENSCPOG00000008955) #27	PCSK1N (ENSCPOG00000007567) #29	TIMM17B (ENSCPOG00000008768) #30	PQBP1 (ENSCPOG00000032410) #31	SLC35A2 (ENSCPOG00000020236) #32	PIM2 (ENSCPOG00000006111) #33	OTUD5 (ENSCPOG00000027082) #34	KCND1 (ENSCPOG00000013271) #35	GRIPAP1 (ENSCPOG00000013274) #36	TFE3 (ENSCPOG00000012410) #37	CCDC120 (ENSCPOG00000012416)	PRAF2 (ENSCPOG00000030120)
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000047315	ENSHGLG00000037561	ENSHGLG00000037959	ENSHGLG00000035322	ENSHGLG00000048980	ENSHGLG00000043694 #13	ENSHGLG00000002944 #15	FTSJ1 (ENSHGLG00000003132) #16	PORCN (ENSHGLG00000001865) #17	EBP (ENSHGLG00000003626) #18	ENSHGLG00000043943	TBC1D25 (ENSHGLG00000005178) #19	ENSHGLG00000042246 ##20	WDR13 (ENSHGLG00000013774) #21	ENSHGLG00000037346	ENSHGLG00000019572 #22	SUV39H1 (ENSHGLG00000007605) #23	ENSHGLG00000008268	GLOD5 (ENSHGLG00000035331) #24	GATA1 (ENSHGLG00000009775) #26	HDAC6 (ENSHGLG00000010523) #27	PCSK1N (ENSHGLG00000002975) #29	ENSHGLG00000020012	TIMM17B (ENSHGLG00000040054) #30	PQBP1 (ENSHGLG00000001252) #31	SLC35A2 (ENSHGLG00000001312) #32	PIM2 (ENSHGLG00000001519) #33	ENSHGLG00000001569 #34	KCND1 (ENSHGLG00000001895) #35	GRIPAP1 (ENSHGLG00000002058) #36	TFE3 (ENSHGLG00000001383) #37
Sciuridae	ANCESTRAL SPECIES	28	ENSGT00390000018078	ENSGT00940000163107	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Eurasian red squirrel	MODERN SPECIES	156	CFP (ENSSVLG00005010884)	ELK1 (ENSSVLG00005010829)	ENSSVLG00005010750	ZNF81 (ENSSVLG00005010677) #7	ZNF182 (ENSSVLG00005010624)	ENSSVLG00005010573 #9	ENSSVLG00005010552	ENSSVLG00005010511 #8	ENSSVLG00005010403 #13	FTSJ1 (ENSSVLG00005010314) #16	PORCN (ENSSVLG00005021517) #17	EBP (ENSSVLG00005021464) #18	TBC1D25 (ENSSVLG00005021446) #19	RBM3 (ENSSVLG00005021391) #20	WDR13 (ENSSVLG00005021358) #21	WAS (ENSSVLG00005021256) #22	SUV39H1 (ENSSVLG00005021209) #23	GLOD5 (ENSSVLG00005021145) #24	GATA1 (ENSSVLG00005021013) #26	HDAC6 (ENSSVLG00005020953) #27	ERAS (ENSSVLG00005020927) #28	PCSK1N (ENSSVLG00005020895) #29	TIMM17B (ENSSVLG00005020828) #30	PQBP1 (ENSSVLG00005020775) #31	SLC35A2 (ENSSVLG00005020649) #32	PIM2 (ENSSVLG00005020572) #33	OTUD5 (ENSSVLG00005020359) #34	KCND1 (ENSSVLG00005020301) #35	GRIPAP1 (ENSSVLG00005020144) #36	TFE3 (ENSSVLG00005020065) #37	CCDC120 (ENSSVLG00005019933)
Marmotini	ANCESTRAL SPECIES	81					ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901.c #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Marmotini_b	ANCESTRAL SPECIES	120					ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000162921	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901.c #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Arctic ground squirrel	MODERN SPECIES	341							ZNF182 (ENSUPAG00010002470)	ENSUPAG00010002478 #9	ENSUPAG00010002488	SLC38A5 (ENSUPAG00010002495) #15	FTSJ1 (ENSUPAG00010002545) #16	PORCN (ENSUPAG00010002577) #17	EBP (ENSUPAG00010002710) #18	TBC1D25 (ENSUPAG00010002723) #19	WDR13 (ENSUPAG00010002757) #21	WAS (ENSUPAG00010002779) #22	SUV39H1 (ENSUPAG00010002798) #23	ENSUPAG00010002821	GLOD5 (ENSUPAG00010002824) #24	GATA1 (ENSUPAG00010002837) #26	HDAC6 (ENSUPAG00010002848) #27	ERAS (ENSUPAG00010002926) #28	PCSK1N (ENSUPAG00010002932) #29	TIMM17B (ENSUPAG00010002940) #30	PQBP1 (ENSUPAG00010002947) #31	SLC35A2 (ENSUPAG00010002977) #32	PIM2 (ENSUPAG00010002998) #33	OTUD5 (ENSUPAG00010003005) #34	KCND1 (ENSUPAG00010003047) #35	GRIPAP1 (ENSUPAG00010003056) #36	ENSUPAG00010003193 #37
Squirrel	MODERN SPECIES	321				ENSSTOG00000028170	ZNF182 (ENSSTOG00000020030)	ENSSTOG00000006249 #9	ENSSTOG00000034288	ENSSTOG00000015375 #13	SLC38A5 (ENSSTOG00000001034) #15	FTSJ1 (ENSSTOG00000027717) #16	PORCN (ENSSTOG00000001047) #17	EBP (ENSSTOG00000001055) #18	TBC1D25 (ENSSTOG00000026006) #19	ENSSTOG00000027493 #20	WDR13 (ENSSTOG00000014866) #21	WAS (ENSSTOG00000028043) #22	SUV39H1 (ENSSTOG00000015328) #23	GLOD5 (ENSSTOG00000014150) #24	GATA1 (ENSSTOG00000026993) #26	HDAC6 (ENSSTOG00000014156) #27	PCSK1N (ENSSTOG00000025546) #29	ERAS (ENSSTOG00000028430) #28	TIMM17B (ENSSTOG00000014173) #30	PQBP1 (ENSSTOG00000034920) #31	SLC35A2 (ENSSTOG00000014179) #32	PIM2 (ENSSTOG00000014191) #33	OTUD5 (ENSSTOG00000014202) #34	KCND1 (ENSSTOG00000019883) #35	GRIPAP1 (ENSSTOG00000014221) #36	TFE3 (ENSSTOG00000014237) #37	CCDC120 (ENSSTOG00000020841)
Alpin marmot	MODERN SPECIES	120					ZNF182 (ENSMMMG00000012687)	ENSMMMG00000012682 #9	ENSMMMG00000012670	ENSMMMG00000012648 #13	SLC38A5 (ENSMMMG00000012638) #15	FTSJ1 (ENSMMMG00000012579) #16	PORCN (ENSMMMG00000012383) #17	EBP (ENSMMMG00000012370) #18	TBC1D25 (ENSMMMG00000012349) #19	RBM3 (ENSMMMG00000012319) #20	WDR13 (ENSMMMG00000012299) #21	WAS (ENSMMMG00000012285) #22	SUV39H1 (ENSMMMG00000012267) #23	ENSMMMG00000012261	ENSMMMG00000012256	GLOD5 (ENSMMMG00000012244) #24	GATA1 (ENSMMMG00000012237) #26	HDAC6 (ENSMMMG00000012161) #27	ENSMMMG00000012156 #28	PCSK1N (ENSMMMG00000012151) #29	TIMM17B (ENSMMMG00000012146) #30	PQBP1 (ENSMMMG00000012121) #31	OTUD5 (ENSMMMG00000012061) #34	KCND1 (ENSMMMG00000012055) #35	GRIPAP1 (ENSMMMG00000011943) #36	TFE3 (ENSMMMG00000011726) #37	ENSMMMG00000011713
Tree shrew	MODERN SPECIES	135																WAS (ENSTBEG00000000531) #22	SUV39H1 (ENSTBEG00000002199) #23
Laurasiatheria	ANCESTRAL SPECIES	16	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Suina	ANCESTRAL SPECIES	7	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Pig	MODERN SPECIES	300	ELK1 (ENSSSCG00000055891)	UXT (ENSSSCG00000012280)	ENSSSCG00000057005	ZNF81 (ENSSSCG00000012283) #7	ZNF182 (ENSSSCG00000012284)	SPACA5 (ENSSSCG00000012285) #9	ZNF630 (ENSSSCG00000012286) #8	ENSSSCG00000047914 #13	SLC38A5 (ENSSSCG00000025981) #15	FTSJ1 (ENSSSCG00000025599) #16	PORCN (ENSSSCG00000024793) #17	EBP (ENSSSCG00000032768) #18	TBC1D25 (ENSSSCG00000040599) #19	RBM3 (ENSSSCG00000021591) ##20	WDR13 (ENSSSCG00000023759) #21	WAS (ENSSSCG00000036747) #22	SUV39H1 (ENSSSCG00000032453) #23	GLOD5 (ENSSSCG00000031477) #24	GATA1 (ENSSSCG00000027237) #26	HDAC6 (ENSSSCG00000025545) #27	ERAS (ENSSSCG00000042563) #28	PCSK1N (ENSSSCG00000021328) #29	TIMM17B (ENSSSCG00000022647) #30	PQBP1 (ENSSSCG00000025264) #31	SLC35A2 (ENSSSCG00000024841) #32	PIM2 (ENSSSCG00000028964) #33	OTUD5 (ENSSSCG00000021934) #34	KCND1 (ENSSSCG00000028284) #35	GRIPAP1 (ENSSSCG00000021106) #36	TFE3 (ENSSSCG00000012287) #37	CCDC120 (ENSSSCG00000012288)
Chacoan peccary	MODERN SPECIES	107	ENSCWAG00000013342	ZNF81 (ENSCWAG00000013271) #7	ENSCWAG00000013242	ENSCWAG00000013190	ZNF182 (ENSCWAG00000013120)	ENSCWAG00000013071 #9	ZNF630 (ENSCWAG00000013003) #8	ENSCWAG00000012946 #13	SLC38A5 (ENSCWAG00000012878) #15	FTSJ1 (ENSCWAG00000012698) #16	PORCN (ENSCWAG00000012490) #17	EBP (ENSCWAG00000012439) #18	TBC1D25 (ENSCWAG00000012417) #19	ENSCWAG00000012360 ##20	WDR13 (ENSCWAG00000012281) #21	WAS (ENSCWAG00000012161) #22	SUV39H1 (ENSCWAG00000012092) #23	GLOD5 (ENSCWAG00000012021) #24	GATA1 (ENSCWAG00000011923) #26	HDAC6 (ENSCWAG00000011826) #27	ERAS (ENSCWAG00000011794) #28	PCSK1N (ENSCWAG00000011786) #29	TIMM17B (ENSCWAG00000011732) #30	PQBP1 (ENSCWAG00000011665) #31	SLC35A2 (ENSCWAG00000011361) #32	PIM2 (ENSCWAG00000011270) #33	OTUD5 (ENSCWAG00000011041) #34	KCND1 (ENSCWAG00000010930) #35	GRIPAP1 (ENSCWAG00000010204) #36	TFE3 (ENSCWAG00000010121) #37	CCDC120 (ENSCWAG00000009998)
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000164959.g.b	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Camelidae	ANCESTRAL SPECIES	45	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000164959.g.b	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Arabian camel	MODERN SPECIES	204	CFP (ENSCDRG00005016016)	ELK1 (ENSCDRG00005016075)	UXT (ENSCDRG00005016167)	ENSCDRG00005016197	ZNF81 (ENSCDRG00005016226) #7	ZNF182 (ENSCDRG00005016242)	ENSCDRG00005016290 #9	ENSCDRG00005016342 #13	SLC38A5 (ENSCDRG00005016431) #15	FTSJ1 (ENSCDRG00005016527) #16	PORCN (ENSCDRG00005016745) #17	EBP (ENSCDRG00005017019) #18	TBC1D25 (ENSCDRG00005017043) #19	RBM3 (ENSCDRG00005017079) ##20	WDR13 (ENSCDRG00005017129) #21	WAS (ENSCDRG00005017181) #22	SUV39H1 (ENSCDRG00005017272) #23	GLOD5 (ENSCDRG00005017341) #24	GATA1 (ENSCDRG00005017373) #26	HDAC6 (ENSCDRG00005017433) #27	ERAS (ENSCDRG00005017547) #28	PCSK1N (ENSCDRG00005017560) #29	TIMM17B (ENSCDRG00005017597) #30	PQBP1 (ENSCDRG00005017618) #31	SLC35A2 (ENSCDRG00005017693) #32	PIM2 (ENSCDRG00005017861) #33	OTUD5 (ENSCDRG00005017909) #34	KCND1 (ENSCDRG00005017937) #35	GRIPAP1 (ENSCDRG00005018016) #36	TFE3 (ENSCDRG00005018293) #37	CCDC120 (ENSCDRG00005018336)
Alpaca	MODERN SPECIES	3472																ENSVPAG00000005140 #22	GLOD5 (ENSVPAG00000005142) #24
Artiodactyla_b	ANCESTRAL SPECIES	24	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000164959.g.b	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Cetacea	ANCESTRAL SPECIES	21	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000164959.g.b	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963.e #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Odontoceti	ANCESTRAL SPECIES	22	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000164959.g.b	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963.e #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Odontoceti_a	ANCESTRAL SPECIES	20	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963.e #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Odontoceti_b	ANCESTRAL SPECIES	22	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963.e #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Monodontidae	ANCESTRAL SPECIES	25	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963.e #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Beluga whale	MODERN SPECIES	58	CFP (ENSDLEG00000014332)	ELK1 (ENSDLEG00000014353)	UXT (ENSDLEG00000014371)	ENSDLEG00000014393	ZNF81 (ENSDLEG00000014408) #7	ZNF182 (ENSDLEG00000014423)	ENSDLEG00000014443 #9	ENSDLEG00000014456	SLC38A5 (ENSDLEG00000014476) #15	FTSJ1 (ENSDLEG00000014522) #16	PORCN (ENSDLEG00000014587) #17	EBP (ENSDLEG00000014898) #18	TBC1D25 (ENSDLEG00000014913) #19	RBM3 (ENSDLEG00000014932) #20	WDR13 (ENSDLEG00000014950) #21	WAS (ENSDLEG00000014970) #22	SUV39H1 (ENSDLEG00000015013) #23	GLOD5 (ENSDLEG00000015027) #24	GATA1 (ENSDLEG00000015042) #26	HDAC6 (ENSDLEG00000015075) #27	ERAS (ENSDLEG00000015182) #28	PCSK1N (ENSDLEG00000015194) #29	TIMM17B (ENSDLEG00000015207) #30	PQBP1 (ENSDLEG00000015219) #31	SLC35A2 (ENSDLEG00000015242) #32	PIM2 (ENSDLEG00000015254) #33	OTUD5 (ENSDLEG00000015262) #34	KCND1 (ENSDLEG00000015277) #35	GRIPAP1 (ENSDLEG00000015299) #36	TFE3 (ENSDLEG00000015379) #37	CCDC120 (ENSDLEG00000015399)
Narwhal	MODERN SPECIES	309	ELK1 (ENSMMNG00015011767)	UXT (ENSMMNG00015011777)	ENSMMNG00015011805	ZNF81 (ENSMMNG00015011815) #7	ZNF182 (ENSMMNG00015011831)	ENSMMNG00015011846 #9	ENSMMNG00015011855	ENSMMNG00015011884 #13	SLC38A5 (ENSMMNG00015011941) #15	FTSJ1 (ENSMMNG00015011978) #16	PORCN (ENSMMNG00015012054) #17	EBP (ENSMMNG00015012106) #18	TBC1D25 (ENSMMNG00015012127) #19	ENSMMNG00015012149 ##20	WDR13 (ENSMMNG00015012173) #21	WAS (ENSMMNG00015012198) #22	SUV39H1 (ENSMMNG00015013434) #23	GLOD5 (ENSMMNG00015013445) #24	GATA1 (ENSMMNG00015013455) #26	HDAC6 (ENSMMNG00015013491) #27	ERAS (ENSMMNG00015013571) #28	PCSK1N (ENSMMNG00015013577) #29	TIMM17B (ENSMMNG00015013591) #30	PQBP1 (ENSMMNG00015013604) #31	SLC35A2 (ENSMMNG00015013653) #32	PIM2 (ENSMMNG00015013727) #33	OTUD5 (ENSMMNG00015013743) #34	KCND1 (ENSMMNG00015013766) #35	GRIPAP1 (ENSMMNG00015013812) #36	TFE3 (ENSMMNG00015013885) #37	CCDC120 (ENSMMNG00015013919)
Vaquita	MODERN SPECIES	34	ENSPSNG00000021035	ZNF81 (ENSPSNG00000021075) #7	ENSPSNG00000021106	ZNF182 (ENSPSNG00000021143)	ENSPSNG00000021166 #9	ENSPSNG00000021187	ENSPSNG00000021205 #13	SLC38A5 (ENSPSNG00000021233) #15	FTSJ1 (ENSPSNG00000021369) #16	PORCN (ENSPSNG00000021437) #17	EBP (ENSPSNG00000021503) #18	TBC1D25 (ENSPSNG00000021530) #19	ENSPSNG00000021553 ##20	WDR13 (ENSPSNG00000021582) #21	ENSPSNG00000021604	WAS (ENSPSNG00000021678) #22	SUV39H1 (ENSPSNG00000021699) #23	GLOD5 (ENSPSNG00000021717) #24	GATA1 (ENSPSNG00000021730) #26	HDAC6 (ENSPSNG00000021767) #27	ERAS (ENSPSNG00000021824) #28	PCSK1N (ENSPSNG00000021831) #29	ENSPSNG00000021876 #30	PQBP1 (ENSPSNG00000021929) #31	PIM2 (ENSPSNG00000021950) #33	OTUD5 (ENSPSNG00000021991) #34	KCND1 (ENSPSNG00000022071) #35	GRIPAP1 (ENSPSNG00000022119) #36	TFE3 (ENSPSNG00000022162) #37	CCDC120 (ENSPSNG00000022188)	PRAF2 (ENSPSNG00000022219)
Dolphin	MODERN SPECIES	3258																ENSTTRG00000004590 #22	SUV39H1 (ENSTTRG00000004638) #23	GLOD5 (ENSTTRG00000004651) #24	GATA1 (ENSTTRG00000004670) #26	HDAC6 (ENSTTRG00000004685) #27	ERAS (ENSTTRG00000004724) #28	PCSK1N (ENSTTRG00000004727) #29	TIMM17B (ENSTTRG00000004732) #30	PQBP1 (ENSTTRG00000004738) #31	SLC35A2 (ENSTTRG00000004744) #32	PIM2 (ENSTTRG00000004747) #33	OTUD5 (ENSTTRG00000004758) #34
Sperm whale	MODERN SPECIES	13	SYN1 (ENSPCTG00005008810)	UXT (ENSPCTG00005008724)	ENSPCTG00005008677	ENSPCTG00005008646	ZNF81 (ENSPCTG00005008580) #7	ZNF182 (ENSPCTG00005008390)	ENSPCTG00005008237 #9	ENSPCTG00005008039 #13	SLC38A5 (ENSPCTG00005007935) #15	FTSJ1 (ENSPCTG00005007848) #16	PORCN (ENSPCTG00005007329) #17	EBP (ENSPCTG00005007244) #18	TBC1D25 (ENSPCTG00005007191) #19	RBM3 (ENSPCTG00005007146) ##20	WDR13 (ENSPCTG00005007072) #21	WAS (ENSPCTG00005007021) #22	SUV39H1 (ENSPCTG00005006907) #23	GLOD5 (ENSPCTG00005006856) #24	GATA1 (ENSPCTG00005006811) #26	HDAC6 (ENSPCTG00005006652) #27	ERAS (ENSPCTG00005006613) #28	PCSK1N (ENSPCTG00005006586) #29	ENSPCTG00005006559 #30	PQBP1 (ENSPCTG00005006511) #31	SLC35A2 (ENSPCTG00005006418) #32	PIM2 (ENSPCTG00005006393) #33	OTUD5 (ENSPCTG00005006316) #34	KCND1 (ENSPCTG00005006272) #35	GRIPAP1 (ENSPCTG00005006138) #36	TFE3 (ENSPCTG00005006092) #37	CCDC120 (ENSPCTG00005005953)
Blue whale	MODERN SPECIES	40	ELK1 (ENSBMSG00010019572)	UXT (ENSBMSG00010019601)	ENSBMSG00010019626	ZNF81 (ENSBMSG00010019647) #7	ENSBMSG00010019667	ZNF182 (ENSBMSG00010019679)	ENSBMSG00010019691 #9	ENSBMSG00010019705 #13	SLC38A5 (ENSBMSG00010019738) #15	FTSJ1 (ENSBMSG00010013830) #16	PORCN (ENSBMSG00010013964) #17	EBP (ENSBMSG00010014081) #18	TBC1D25 (ENSBMSG00010014115) #19	ENSBMSG00010014141 ##20	WDR13 (ENSBMSG00010014163) #21	WAS (ENSBMSG00010014198) #22	SUV39H1 (ENSBMSG00010014243) #23	GLOD5 (ENSBMSG00010014293) #24	GATA1 (ENSBMSG00010014317) #26	HDAC6 (ENSBMSG00010014376) #27	ERAS (ENSBMSG00010014416) #28	PCSK1N (ENSBMSG00010014426) #29	TIMM17B (ENSBMSG00010014450) #30	PQBP1 (ENSBMSG00010014494) #31	SLC35A2 (ENSBMSG00010014560) #32	PIM2 (ENSBMSG00010014679) #33	ENSBMSG00010014732 #34	KCND1 (ENSBMSG00010014802) #35	GRIPAP1 (ENSBMSG00010014874) #36	TFE3 (ENSBMSG00010014969) #37	CCDC120 (ENSBMSG00010015009)
Pecora	ANCESTRAL SPECIES	27	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000153700.ub.b.a	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146.db.a #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000006247.e.b	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Yarkand deer	MODERN SPECIES	1323	PFKFB1 (ENSCHYG00000013428)	APEX2 (ENSCHYG00000013314)	ALAS2 (ENSCHYG00000013150)	ENSCHYG00000013116	ZNF81 (ENSCHYG00000013067) #7	ZNF182 (ENSCHYG00000013010)	ENSCHYG00000012978 #9	ENSCHYG00000012946 #13	SLC38A5 (ENSCHYG00000012767) #15	ENSCHYG00000012549 #16	PORCN (ENSCHYG00000012176) #17	EBP (ENSCHYG00000012133) #18	TBC1D25 (ENSCHYG00000012073) #19	RBM3 (ENSCHYG00000011980) ##20	WDR13 (ENSCHYG00000011832) #21	WAS (ENSCHYG00000011572) #22	SUV39H1 (ENSCHYG00000011530) #23	ENSCHYG00000011491	GLOD5 (ENSCHYG00000011409) #24	GATA1 (ENSCHYG00000011351) #26	HDAC6 (ENSCHYG00000011007) #27	ERAS (ENSCHYG00000010970) #28	PCSK1N (ENSCHYG00000010927) #29	ENSCHYG00000010894	TIMM17B (ENSCHYG00000010797) #30	PQBP1 (ENSCHYG00000010724) #31	SLC35A2 (ENSCHYG00000010376) #32	PIM2 (ENSCHYG00000010311) #33	OTUD5 (ENSCHYG00000010124) #34	KCND1 (ENSCHYG00000010050) #35	ENSCHYG00000009761 #36
Percora_a	ANCESTRAL SPECIES	22	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000153700.ub.b.a	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146.db.a #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000006247.e.b	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Bovidae	ANCESTRAL SPECIES	23	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000153700.ub.b.a	ENSGT00940000164993	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146.db.a #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000006247.e.b	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Caprinae	ANCESTRAL SPECIES	40	ENSGT00390000018078	ENSGT00940000164993	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484.n #13	ENSGT00940000163698 #8	ENSGT00390000012484.m #13	ENSGT00940000161233 #15	ENSGT00730000111146.db.a #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a.n #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000006247.e.b	ENSGT00390000017780.e.s #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Rambouillet Sheep	MODERN SPECIES	205	ENSOARG00020021917	ENSOARG00020021900	ENSOARG00020021854	ZNF81 (ENSOARG00020021768) #7	ZNF182 (ENSOARG00020021721)	ENSOARG00020021683 #9	ENSOARG00020021616 #13	ENSOARG00020021587 #13	SLC38A5 (ENSOARG00020021490) #15	FTSJ1 (ENSOARG00020021373) #16	PORCN (ENSOARG00020020147) #17	EBP (ENSOARG00020020086) #18	TBC1D25 (ENSOARG00020020035) #19	RBM3 (ENSOARG00020019997) ##20	WDR13 (ENSOARG00020019947) #21	WAS (ENSOARG00020019858) #22	SUV39H1 (ENSOARG00020019775) #23	GLOD5 (ENSOARG00020019731) #24	GATA1 (ENSOARG00020019687) #26	HDAC6 (ENSOARG00020019522) #27	ERAS (ENSOARG00020019493) #28	PCSK1N (ENSOARG00020019460) #29	ENSOARG00020019438	TIMM17B (ENSOARG00020019398) #30	PQBP1 (ENSOARG00020019308) #31	SLC35A2 (ENSOARG00020018735) #32	PIM2 (ENSOARG00020018673) #33	OTUD5 (ENSOARG00020018505) #34	KCND1 (ENSOARG00020018421) #35	GRIPAP1 (ENSOARG00020017638) #36	TFE3 (ENSOARG00020017512) #37
Goat	MODERN SPECIES	66									SLC38A5 (ENSCHIG00000000197) #15	ENSCHIG00000000441 #16	PORCN (ENSCHIG00000016040) #17	ENSCHIG00000021522 #18	TBC1D25 (ENSCHIG00000024605) #19	RBM3 (ENSCHIG00000009007) ##20	WDR13 (ENSCHIG00000016907) #21	WAS (ENSCHIG00000024081) #22	SUV39H1 (ENSCHIG00000010138) #23
Bovinae	ANCESTRAL SPECIES	38	ENSGT00940000153700.ub.b.a.d	ENSGT00940000153700.ub.b.a.c	ENSGT00940000164993	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484.k #13	ENSGT00390000012484.l #13	ENSGT00940000161233 #15	ENSGT00730000111146.db.a #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000006247.e.b	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Bos	ANCESTRAL SPECIES	30	ENSGT00940000153700.ub.b.a.c	ENSGT00940000164993.e	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484.k #13	ENSGT00390000012484.l #13	ENSGT00940000161233 #15	ENSGT00730000111146.db.a #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00950000182891.a.a.b.a.a.a.b.a.a	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000006247.e.b	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Bos_a	ANCESTRAL SPECIES	26	ENSGT00940000153700.ub.b.a.c	ENSGT00940000164993.e	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484.k #13	ENSGT00390000012484.l #13	ENSGT00940000161233 #15	ENSGT00730000111146.db.a #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00950000182891.a.a.b.a.a.a.b.a.a	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000006247.e.b	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Domestic yak	MODERN SPECIES	69	ENSBGRG00000016619	ENSBGRG00000016643	ENSBGRG00000016683 #7	ZNF182 (ENSBGRG00000016702)	ENSBGRG00000016915 #9	ENSBGRG00000016947 #13	ENSBGRG00000017067 #13	ENSBGRG00000017186	SLC38A5 (ENSBGRG00000017235) #15	FTSJ1 (ENSBGRG00000017760) #16	PORCN (ENSBGRG00000018078) #17	EBP (ENSBGRG00000018809) #18	TBC1D25 (ENSBGRG00000018856) #19	ENSBGRG00000018988	WDR13 (ENSBGRG00000019030) #21	WAS (ENSBGRG00000019207) #22	SUV39H1 (ENSBGRG00000019464) #23	GLOD5 (ENSBGRG00000019638) #24	GATA1 (ENSBGRG00000019786) #26	HDAC6 (ENSBGRG00000019900) #27	ERAS (ENSBGRG00000017973) #28	PCSK1N (ENSBGRG00000017992) #29	ENSBGRG00000018026	TIMM17B (ENSBGRG00000018055) #30	PQBP1 (ENSBGRG00000018132) #31	SLC35A2 (ENSBGRG00000018196) #32	PIM2 (ENSBGRG00000018477) #33	OTUD5 (ENSBGRG00000018572) #34	KCND1 (ENSBGRG00000018827) #35	GRIPAP1 (ENSBGRG00000018956) #36	TFE3 (ENSBGRG00000019914) #37
Wild yak	MODERN SPECIES	100							ENSBMUG00000005640	SLC38A5 (ENSBMUG00000005627) #15	FTSJ1 (ENSBMUG00000005590) #16	PORCN (ENSBMUG00000005520) #17	EBP (ENSBMUG00000005432) #18	ENSBMUG00000005424	TBC1D25 (ENSBMUG00000005413) #19	RBM3 (ENSBMUG00000005406) ##20	WDR13 (ENSBMUG00000005394) #21	WAS (ENSBMUG00000005376) #22	SUV39H1 (ENSBMUG00000005366) #23	GLOD5 (ENSBMUG00000005358) #24	GATA1 (ENSBMUG00000005353) #26	HDAC6 (ENSBMUG00000005294) #27	ERAS (ENSBMUG00000005191) #28	ENSBMUG00000005166	TIMM17B (ENSBMUG00000005154) #30	PQBP1 (ENSBMUG00000005136) #31	SLC35A2 (ENSBMUG00000005102) #32	PIM2 (ENSBMUG00000005005) #33	OTUD5 (ENSBMUG00000004985) #34	KCND1 (ENSBMUG00000004963) #35	GRIPAP1 (ENSBMUG00000004899) #36	TFE3 (ENSBMUG00000004711) #37	CCDC120 (ENSBMUG00000004689)
Bos_b	ANCESTRAL SPECIES	12	ENSGT00940000164993.e	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484.k #13	ENSGT00390000012484.l #13	ENSGT00940000161233 #15	ENSGT00730000111146.db.a #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00950000182891.a.a.b.a.a.a.b.a.a	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.b ##20	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000006247.e.b	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Hybrid Bos Indicus	MODERN SPECIES	315	ENSBIXG00005006086	ENSBIXG00005000260	ZNF81 (ENSBIXG00005008791) #7	ZNF182 (ENSBIXG00005008809)	ENSBIXG00005008829 #9	ENSBIXG00005008850 #13	ENSBIXG00005000308 #13	SLC38A5 (ENSBIXG00005008903) #15	FTSJ1 (ENSBIXG00005008955) #16	PORCN (ENSBIXG00005009012) #17	EBP (ENSBIXG00005006089) #18	ENSBIXG00005009063	TBC1D25 (ENSBIXG00005009079) #19	ENSBIXG00005009118 ##20	WDR13 (ENSBIXG00005009138) #21	WAS (ENSBIXG00005009177) #22	SUV39H1 (ENSBIXG00005009201) #23	ENSBIXG00005000431	GLOD5 (ENSBIXG00005009242) #24	GATA1 (ENSBIXG00005009261) #26	HDAC6 (ENSBIXG00005000532) #27	ERAS (ENSBIXG00005009662) #28	PCSK1N (ENSBIXG00005009686) #29	ENSBIXG00005007464	TIMM17B (ENSBIXG00005009725) #30	PQBP1 (ENSBIXG00005009781) #31	SLC35A2 (ENSBIXG00005009832) #32	PIM2 (ENSBIXG00005009846) #33	OTUD5 (ENSBIXG00005009869) #34	KCND1 (ENSBIXG00005009897) #35	GRIPAP1 (ENSBIXG00005010105) #36
Cow	MODERN SPECIES	177	ZNF81 (ENSBTAG00000005866) #7	ENSBTAG00000047194	ENSBTAG00000017660	ZNF182 (ENSBTAG00000046774)	SPACA5 (ENSBTAG00000046069) #9	ENSBTAG00000054604 #13	SSX5 (ENSBTAG00000048817) #13	SLC38A5 (ENSBTAG00000011854) #15	FTSJ1 (ENSBTAG00000031829) #16	PORCN (ENSBTAG00000009282) #17	EBP (ENSBTAG00000009287) #18	TBC1D25 (ENSBTAG00000009288) #19	ENSBTAG00000051063	RBM3 (ENSBTAG00000025848) ##20	WDR13 (ENSBTAG00000018060) #21	WAS (ENSBTAG00000046555) #22	SUV39H1 (ENSBTAG00000004706) #23	GLOD5 (ENSBTAG00000052110) #24	GATA1 (ENSBTAG00000003184) #26	HDAC6 (ENSBTAG00000013244) #27	ERAS (ENSBTAG00000012954) #28	PCSK1N (ENSBTAG00000013250) #29	ENSBTAG00000049284	TIMM17B (ENSBTAG00000018496) #30	PQBP1 (ENSBTAG00000018498) #31	SLC35A2 (ENSBTAG00000002768) #32	PIM2 (ENSBTAG00000004597) #33	OTUD5 (ENSBTAG00000004600) #34	KCND1 (ENSBTAG00000009024) #35	GRIPAP1 (ENSBTAG00000007788) #36	TFE3 (ENSBTAG00000008523) #37
Siberian musk deer	MODERN SPECIES	140	ENSMMSG00000013919	ZNF81 (ENSMMSG00000013952) #7	ENSMMSG00000013995	ENSMMSG00000014008	ENSMMSG00000014027	ZNF182 (ENSMMSG00000014060)	ENSMMSG00000014089 #9	ENSMMSG00000014111 #13	SLC38A5 (ENSMMSG00000014145) #15	ENSMMSG00000014231 #16	PORCN (ENSMMSG00000014343) #17	EBP (ENSMMSG00000014479) #18	TBC1D25 (ENSMMSG00000014487) #19	RBM3 (ENSMMSG00000014505) ##20	WDR13 (ENSMMSG00000014527) #21	WAS (ENSMMSG00000014556) #22	SUV39H1 (ENSMMSG00000014578) #23	ENSMMSG00000014613	GATA1 (ENSMMSG00000014634) #26	HDAC6 (ENSMMSG00000014675) #27	ERAS (ENSMMSG00000014709) #28	PCSK1N (ENSMMSG00000014718) #29	ENSMMSG00000014734	ENSMMSG00000014746	ENSMMSG00000014758 #30	PQBP1 (ENSMMSG00000014787) #31	SLC35A2 (ENSMMSG00000014825) #32	PIM2 (ENSMMSG00000014885) #33	OTUD5 (ENSMMSG00000014915) #34	KCND1 (ENSMMSG00000014993) #35	GRIPAP1 (ENSMMSG00000015045) #36
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Carnivora	ANCESTRAL SPECIES	11	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Caniformia	ANCESTRAL SPECIES	26	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Caniformia_b	ANCESTRAL SPECIES	24	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Ursidae	ANCESTRAL SPECIES	28	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Ursus	ANCESTRAL SPECIES	122	ENSGT00940000159633.c	ENSGT00940000159633.d	ENSGT00940000161978	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000163698 #8	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000017780.e #30	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00940000158528.y.a.e
American black bear	MODERN SPECIES	5395																WAS (ENSUAMG00000022093) #22	ENSUAMG00000022095
Polar bear	MODERN SPECIES	91	ENSUMAG00000008147	ENSUMAG00000008141	ZNF157 (ENSUMAG00000008138)	ZNF41 (ENSUMAG00000008129)	ARAF (ENSUMAG00000008085)	UXT (ENSUMAG00000008053)	ENSUMAG00000008043	ZNF81 (ENSUMAG00000008037) #7	ENSUMAG00000008019 #9	ZNF182 (ENSUMAG00000008013)	FTSJ1 (ENSUMAG00000007966) #16	PORCN (ENSUMAG00000007862) #17	EBP (ENSUMAG00000007841) #18	TBC1D25 (ENSUMAG00000007791) #19	RBM3 (ENSUMAG00000007785) ##20	WAS (ENSUMAG00000007712) #22	GLOD5 (ENSUMAG00000007692) #24	GATA1 (ENSUMAG00000007684) #26	HDAC6 (ENSUMAG00000007294) #27	ENSUMAG00000007252	ENSUMAG00000007251 #32	OTUD5 (ENSUMAG00000007218) #34	ENSUMAG00000007168 #36	TFE3 (ENSUMAG00000007096) #37	ENSUMAG00000007076	GPKOW (ENSUMAG00000007072)	ENSUMAG00000007070	ENSUMAG00000007062	ENSUMAG00000007052	CACNA1F (ENSUMAG00000006984)	FOXP3 (ENSUMAG00000006966)
Giant Panda	MODERN SPECIES	2288	CFP (ENSAMEG00000012869)	ELK1 (ENSAMEG00000012855)	UXT (ENSAMEG00000026374)	ZNF81 (ENSAMEG00000012840) #7	ZNF182 (ENSAMEG00000012837)	ENSAMEG00000012812 #9	ZNF630 (ENSAMEG00000029800) #8	ENSAMEG00000012801 #13	SLC38A5 (ENSAMEG00000012758) #15	ENSAMEG00000012735 #16	PORCN (ENSAMEG00000012689) #17	EBP (ENSAMEG00000012679) #18	TBC1D25 (ENSAMEG00000012666) #19	RBM3 (ENSAMEG00000012653) ##20	WDR13 (ENSAMEG00000012633) #21	WAS (ENSAMEG00000012609) #22	SUV39H1 (ENSAMEG00000012595) #23	GLOD5 (ENSAMEG00000026965) #24	GATA1 (ENSAMEG00000012588) #26	HDAC6 (ENSAMEG00000012489) #27	ERAS (ENSAMEG00000019682) #28	PCSK1N (ENSAMEG00000023496) #29	TIMM17B (ENSAMEG00000024786) #30	PQBP1 (ENSAMEG00000012460) #31	SLC35A2 (ENSAMEG00000012448) #32	PIM2 (ENSAMEG00000012433) #33	OTUD5 (ENSAMEG00000012420) #34	KCND1 (ENSAMEG00000012403) #35	GRIPAP1 (ENSAMEG00000012366) #36	TFE3 (ENSAMEG00000012353) #37	CCDC120 (ENSAMEG00000012341)
Mustelinae	ANCESTRAL SPECIES	62	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Ferret	MODERN SPECIES	209	UXT (ENSMPUG00000013405)	ENSMPUG00000013417	ZNF81 (ENSMPUG00000013422) #7	ZNF182 (ENSMPUG00000013426)	ENSMPUG00000013430 #9	ENSMPUG00000013455 #8	ENSMPUG00000013459	ENSMPUG00000013469 #13	SLC38A5 (ENSMPUG00000013487) #15	FTSJ1 (ENSMPUG00000013493) #16	PORCN (ENSMPUG00000013546) #17	EBP (ENSMPUG00000013608) #18	TBC1D25 (ENSMPUG00000013612) #19	RBM3 (ENSMPUG00000013632) ##20	WDR13 (ENSMPUG00000013638) #21	WAS (ENSMPUG00000013645) #22	SUV39H1 (ENSMPUG00000013648) #23	ENSMPUG00000013647	GLOD5 (ENSMPUG00000013652) #24	ENSMPUG00000018972	GATA1 (ENSMPUG00000013656) #26	HDAC6 (ENSMPUG00000013660) #27	PCSK1N (ENSMPUG00000013669) #29	TIMM17B (ENSMPUG00000013675) #30	PQBP1 (ENSMPUG00000013699) #31	SLC35A2 (ENSMPUG00000013719) #32	PIM2 (ENSMPUG00000013731) #33	OTUD5 (ENSMPUG00000013747) #34	KCND1 (ENSMPUG00000013750) #35	GRIPAP1 (ENSMPUG00000013785) #36	TFE3 (ENSMPUG00000013794) #37
American mink	MODERN SPECIES	349				ZNF81 (ENSNVIG00000006098) #7	ZNF182 (ENSNVIG00000006120)	ENSNVIG00000006138 #9	ZNF630 (ENSNVIG00000006158) #8	ENSNVIG00000006180 #13	SLC38A5 (ENSNVIG00000006225) #15	FTSJ1 (ENSNVIG00000006249) #16	PORCN (ENSNVIG00000006270) #17	EBP (ENSNVIG00000006482) #18	TBC1D25 (ENSNVIG00000006496) #19	ENSNVIG00000006510 ##20	WDR13 (ENSNVIG00000006529) #21	WAS (ENSNVIG00000006554) #22	SUV39H1 (ENSNVIG00000006587) #23	GLOD5 (ENSNVIG00000006614) #24	GATA1 (ENSNVIG00000006621) #26	HDAC6 (ENSNVIG00000006646) #27	ERAS (ENSNVIG00000006780) #28	TIMM17B (ENSNVIG00000006794) #30	PQBP1 (ENSNVIG00000006825) #31	SLC35A2 (ENSNVIG00000006862) #32	PIM2 (ENSNVIG00000006922) #33	OTUD5 (ENSNVIG00000006935) #34	KCND1 (ENSNVIG00000006987) #35	GRIPAP1 (ENSNVIG00000007030) #36	TFE3 (ENSNVIG00000007224) #37	CCDC120 (ENSNVIG00000007235)	WDR45 (ENSNVIG00000007299)
Canidae	ANCESTRAL SPECIES	26	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a.p #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Canis_lupus	ANCESTRAL SPECIES	26	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a.p #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.b.j.a ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT01080000259842	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37
Dingo	MODERN SPECIES	247	CFP (ENSCAFG00020021367)	ELK1 (ENSCAFG00020021365)	UXT (ENSCAFG00020021364)	ZNF81 (ENSCAFG00020021363) #7	ENSCAFG00020021361 #9	ZNF182 (ENSCAFG00020021360)	ENSCAFG00020021356 #13	SLC38A5 (ENSCAFG00020021352) #15	FTSJ1 (ENSCAFG00020021351) #16	PORCN (ENSCAFG00020021349) #17	ENSCAFG00020021346 #18	TBC1D25 (ENSCAFG00020021345) #19	ENSCAFG00020021344 #20	ENSCAFG00020021343	WDR13 (ENSCAFG00020021341) #21	WAS (ENSCAFG00020021337) #22	SUV39H1 (ENSCAFG00020021335) #23	GLOD5 (ENSCAFG00020021332) #24	GATA1 (ENSCAFG00020021331) #26	HDAC6 (ENSCAFG00020020385) #27	ERAS (ENSCAFG00020020329) #28	PCSK1N (ENSCAFG00020020325) #29	ENSCAFG00020020323	TIMM17B (ENSCAFG00020020319) #30	PQBP1 (ENSCAFG00020020314) #31	SLC35A2 (ENSCAFG00020020311) #32	PIM2 (ENSCAFG00020020303) #33	OTUD5 (ENSCAFG00020020300) #34	KCND1 (ENSCAFG00020020294) #35	GRIPAP1 (ENSCAFG00020020285) #36	TFE3 (ENSCAFG00020020278) #37
Dog	MODERN SPECIES	144	VSIG4 (ENSCAFG00845027388)	MSN (ENSCAFG00845027053)	ENSCAFG00845026989	ENSCAFG00845026959	ENSCAFG00845026919	ENSCAFG00845026875	LAS1L (ENSCAFG00845026712)	ENSCAFG00845026660	ENSCAFG00845026510	ENSCAFG00845026476	ZC4H2 (ENSCAFG00845026387)	ENSCAFG00845026204	ENSCAFG00845026166 #19	ENSCAFG00845026005 ##20	WDR13 (ENSCAFG00845025857) #21	ENSCAFG00845025658 #22	MAGED2 (ENSCAFG00845025395)	ENSCAFG00845025339	ASB12 (ENSCAFG00845025270)	AMER1 (ENSCAFG00845025237)	ARHGEF9 (ENSCAFG00845024964)	ENSCAFG00845024862	ENSCAFG00845024814	ENSCAFG00845024775	ENSCAFG00845024656	ENSCAFG00845024625	ENSCAFG00845024592	ENSCAFG00845024513	ENSCAFG00845024474	ENSCAFG00845030453	ENSCAFG00845030432
Red fox	MODERN SPECIES	171	CFP (ENSVVUG00000017556)	ELK1 (ENSVVUG00000017571)	UXT (ENSVVUG00000017576)	ENSVVUG00000017583	ZNF81 (ENSVVUG00000017593) #7	ZNF182 (ENSVVUG00000017595)	ENSVVUG00000017597 #9	ZNF630 (ENSVVUG00000017598) #8	ENSVVUG00000017602 #13	SLC38A5 (ENSVVUG00000017611) #15	FTSJ1 (ENSVVUG00000017640) #16	PORCN (ENSVVUG00000017648) #17	TBC1D25 (ENSVVUG00000017664) #19	RBM3 (ENSVVUG00000017670) ##20	WDR13 (ENSVVUG00000017695) #21	WAS (ENSVVUG00000017704) #22	SUV39H1 (ENSVVUG00000017748) #23	GLOD5 (ENSVVUG00000017754) #24	GATA1 (ENSVVUG00000017758) #26	HDAC6 (ENSVVUG00000017760) #27	ERAS (ENSVVUG00000017770) #28	PCSK1N (ENSVVUG00000017773) #29	ENSVVUG00000017774	TIMM17B (ENSVVUG00000017777) #30	PQBP1 (ENSVVUG00000017780) #31	SLC35A2 (ENSVVUG00000017783) #32	PIM2 (ENSVVUG00000017785) #33	OTUD5 (ENSVVUG00000017789) #34	KCND1 (ENSVVUG00000017790) #35	GRIPAP1 (ENSVVUG00000017793) #36	TFE3 (ENSVVUG00000017798) #37
Felidae	ANCESTRAL SPECIES	12	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Panthera	ANCESTRAL SPECIES	39	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000165768	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Tiger	MODERN SPECIES	213															WDR13 (ENSPTIG00000008576) #21	WAS (ENSPTIG00000007456) #22	SUV39H1 (ENSPTIG00000006678) #23	GLOD5 (ENSPTIG00000005943) #24	GATA1 (ENSPTIG00000005667) #26	ENSPTIG00000004413 #27	ENSPTIG00000020781 #27	ERAS (ENSPTIG00000003826) #28	TIMM17B (ENSPTIG00000020403) #30	PQBP1 (ENSPTIG00000019101) #31	ENSPTIG00000017671 #32	PIM2 (ENSPTIG00000017127) #33	OTUD5 (ENSPTIG00000016746) #34	ENSPTIG00000016518 #35	GRIPAP1 (ENSPTIG00000014563) #36	TFE3 (ENSPTIG00000013893) #37	PRAF2 (ENSPTIG00000013572)
Panthera_a	ANCESTRAL SPECIES	39	ENSGT00940000162553 #7	ENSGT00940000165768	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a #20	ENSGT00940000153524.b.a.b.j.a ##20	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
leopard	MODERN SPECIES	69	UXT (ENSPPRG00000003608)	ENSPPRG00000002650	ZNF81 (ENSPPRG00000002587) #7	ENSPPRG00000001691	ZNF182 (ENSPPRG00000001597)	ENSPPRG00000001440 #9	ZNF630 (ENSPPRG00000001282) #8	SLC38A5 (ENSPPRG00000000636) #15	FTSJ1 (ENSPPRG00000000249) #16	PORCN (ENSPPRG00000023093) #17	EBP (ENSPPRG00000016220) #18	TBC1D25 (ENSPPRG00000016058) #19	ENSPPRG00000013361 #20	ENSPPRG00000013315 ##20	WDR13 (ENSPPRG00000012943) #21	WAS (ENSPPRG00000012043) #22	SUV39H1 (ENSPPRG00000011651) #23	GLOD5 (ENSPPRG00000011142) #24	GATA1 (ENSPPRG00000010828) #26	HDAC6 (ENSPPRG00000010597) #27	ERAS (ENSPPRG00000022016) #28	PCSK1N (ENSPPRG00000010202) #29	TIMM17B (ENSPPRG00000010152) #30	PQBP1 (ENSPPRG00000009961) #31	SLC35A2 (ENSPPRG00000007850) #32	PIM2 (ENSPPRG00000005796) #33	OTUD5 (ENSPPRG00000005742) #34	KCND1 (ENSPPRG00000003846) #35	GRIPAP1 (ENSPPRG00000003589) #36	TFE3 (ENSPPRG00000001116) #37	CCDC120 (ENSPPRG00000000745)
lion	MODERN SPECIES	88	CFP (ENSPLOG00000022710)	ELK1 (ENSPLOG00000022712)	UXT (ENSPLOG00000022713)	ZNF81 (ENSPLOG00000022714) #7	ENSPLOG00000022716	ZNF182 (ENSPLOG00000014582)	ZNF630 (ENSPLOG00000014667) #8	ENSPLOG00000014780 #13	SLC38A5 (ENSPLOG00000015071) #15	FTSJ1 (ENSPLOG00000015169) #16	PORCN (ENSPLOG00000015411) #17	EBP (ENSPLOG00000015923) #18	TBC1D25 (ENSPLOG00000015966) #19	ENSPLOG00000016016 ##20	WDR13 (ENSPLOG00000016052) #21	WAS (ENSPLOG00000016098) #22	SUV39H1 (ENSPLOG00000016147) #23	GLOD5 (ENSPLOG00000016225) #24	GATA1 (ENSPLOG00000016279) #26	HDAC6 (ENSPLOG00000016347) #27	ERAS (ENSPLOG00000016421) #28	PCSK1N (ENSPLOG00000016448) #29	TIMM17B (ENSPLOG00000016478) #30	PQBP1 (ENSPLOG00000016512) #31	SLC35A2 (ENSPLOG00000016600) #32	PIM2 (ENSPLOG00000016754) #33	OTUD5 (ENSPLOG00000016836) #34	KCND1 (ENSPLOG00000016999) #35	GRIPAP1 (ENSPLOG00000017133) #36	TFE3 (ENSPLOG00000017261) #37	CCDC120 (ENSPLOG00000017322)
Cat	MODERN SPECIES	252	ELK1 (ENSFCAG00000008192)	UXT (ENSFCAG00000028638)	ENSFCAG00000049210	ZNF81 (ENSFCAG00000044281) #7	ZNF182 (ENSFCAG00000030362)	ENSFCAG00000037221 #9	ZNF630 (ENSFCAG00000044726) #8	ENSFCAG00000047414 #13	SLC38A5 (ENSFCAG00000008530) #15	FTSJ1 (ENSFCAG00000026453) #16	PORCN (ENSFCAG00000008533) #17	EBP (ENSFCAG00000031944) #18	TBC1D25 (ENSFCAG00000008538) #19	ENSFCAG00000002245 ##20	WDR13 (ENSFCAG00000008539) #21	WAS (ENSFCAG00000018126) #22	SUV39H1 (ENSFCAG00000002566) #23	GLOD5 (ENSFCAG00000002567) #24	GATA1 (ENSFCAG00000010904) #26	HDAC6 (ENSFCAG00000002568) #27	ERAS (ENSFCAG00000052277) #28	PCSK1N (ENSFCAG00000011223) #29	TIMM17B (ENSFCAG00000002569) #30	PQBP1 (ENSFCAG00000002570) #31	SLC35A2 (ENSFCAG00000002571) #32	PIM2 (ENSFCAG00000022467) #33	OTUD5 (ENSFCAG00000002572) #34	KCND1 (ENSFCAG00000002579) #35	GRIPAP1 (ENSFCAG00000002573) #36	TFE3 (ENSFCAG00000002574) #37	CCDC120 (ENSFCAG00000028936)
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Equus	ANCESTRAL SPECIES	27	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Horse	MODERN SPECIES	480	ELK1 (ENSECAG00000008421)	UXT (ENSECAG00000013253)	ENSECAG00000056361	ZNF81 (ENSECAG00000019179) #7	ZNF182 (ENSECAG00000021056)	ENSECAG00000022175 #9	ZNF630 (ENSECAG00000002226) #8	ENSECAG00000005068 #13	SLC38A5 (ENSECAG00000006306) #15	FTSJ1 (ENSECAG00000019260) #16	PORCN (ENSECAG00000008645) #17	EBP (ENSECAG00000022178) #18	TBC1D25 (ENSECAG00000023474) #19	RBM3 (ENSECAG00000024257) ##20	WDR13 (ENSECAG00000010542) #21	WAS (ENSECAG00000000253) #22	ENSECAG00000057249	SUV39H1 (ENSECAG00000015438) #23	GLOD5 (ENSECAG00000020516) #24	GATA1 (ENSECAG00000037888) #26	HDAC6 (ENSECAG00000000227) #27	ERAS (ENSECAG00000003691) #28	PCSK1N (ENSECAG00000038828) #29	PQBP1 (ENSECAG00000017372) #31	TIMM17B (ENSECAG00000045908) #30	SLC35A2 (ENSECAG00000000263) #32	PIM2 (ENSECAG00000007505) #33	OTUD5 (ENSECAG00000010819) #34	KCND1 (ENSECAG00000014802) #35	GRIPAP1 (ENSECAG00000019987) #36	TFE3 (ENSECAG00000020642) #37
Donkey	MODERN SPECIES	36	ELK1 (ENSEASG00005033281)	UXT (ENSEASG00005036125)	ZNF81 (ENSEASG00005011135) #7	ZNF182 (ENSEASG00005008334)	ENSEASG00005027313 #9	ENSEASG00005010957	ENSEASG00005008331 #8	ENSEASG00005008327 #13	SLC38A5 (ENSEASG00005008319) #15	ENSEASG00005008272 #16	PORCN (ENSEASG00005029924) #17	EBP (ENSEASG00005033865) #18	TBC1D25 (ENSEASG00005008258) #19	ENSEASG00005008251 ##20	WDR13 (ENSEASG00005008241) #21	WAS (ENSEASG00005008232) #22	SUV39H1 (ENSEASG00005032520) #23	GLOD5 (ENSEASG00005019767) #24	GATA1 (ENSEASG00005019766) #26	HDAC6 (ENSEASG00005019298) #27	ERAS (ENSEASG00005024513) #28	PCSK1N (ENSEASG00005019237) #29	TIMM17B (ENSEASG00005036033) #30	PQBP1 (ENSEASG00005036427) #31	SLC35A2 (ENSEASG00005028169) #32	PIM2 (ENSEASG00005019217) #33	OTUD5 (ENSEASG00005019209) #34	KCND1 (ENSEASG00005019201) #35	GRIPAP1 (ENSEASG00005019166) #36	TFE3 (ENSEASG00005014881) #37	CCDC120 (ENSEASG00005003438)
Chiroptera	ANCESTRAL SPECIES	25	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00940000163698 #8	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Microchiroptera	ANCESTRAL SPECIES	25	ENSGT00940000161081	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553 #7	ENSGT00940000162614	ENSGT00940000162205 #9	ENSGT00390000012484 #13	ENSGT00940000161233 #15	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.b ##20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153941.a.b #24	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT00940000162901 #28	ENSGT00390000013488 #29	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000162057 #35	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b
Greater horseshoe bat	MODERN SPECIES		TIMP1 (ENSRFEG00010001520)	SYN1 (ENSRFEG00010001477)	CFP (ENSRFEG00010001425)	ELK1 (ENSRFEG00010001406)	UXT (ENSRFEG00010001368)	ENSRFEG00010001344	ZNF81 (ENSRFEG00010001320) #7	ENSRFEG00010001197 #9	SLC38A5 (ENSRFEG00010001152) #15	FTSJ1 (ENSRFEG00010001062) #16	PORCN (ENSRFEG00010000961) #17	EBP (ENSRFEG00010000910) #18	TBC1D25 (ENSRFEG00010000893) #19	ENSRFEG00010000843 ##20	WDR13 (ENSRFEG00010000820) #21	WAS (ENSRFEG00010000800) #22	SUV39H1 (ENSRFEG00010000760) #23	GLOD5 (ENSRFEG00010000744) #24	GATA1 (ENSRFEG00010000723) #26	HDAC6 (ENSRFEG00010000672) #27	ERAS (ENSRFEG00010000648) #28	PCSK1N (ENSRFEG00010000636) #29	ENSRFEG00010000594 #30	PQBP1 (ENSRFEG00010000576) #31	SLC35A2 (ENSRFEG00010000550) #32	PIM2 (ENSRFEG00010000535) #33	OTUD5 (ENSRFEG00010000513) #34	KCND1 (ENSRFEG00010000496) #35	GRIPAP1 (ENSRFEG00010000438) #36	TFE3 (ENSRFEG00010000384) #37	CCDC120 (ENSRFEG00010000349)
Microbat	MODERN SPECIES	1133	TIMP1 (ENSMLUG00000004075)	CFP (ENSMLUG00000028893)	ELK1 (ENSMLUG00000001776)	ENSMLUG00000000341	ZNF81 (ENSMLUG00000011734) #7	ZNF182 (ENSMLUG00000000480)	ENSMLUG00000030438 #9	ENSMLUG00000001798 #13	SLC38A5 (ENSMLUG00000003966) #15	FTSJ1 (ENSMLUG00000003977) #16	PORCN (ENSMLUG00000003981) #17	EBP (ENSMLUG00000023969) #18	ENSMLUG00000003989 #19	RBM3 (ENSMLUG00000003996) ##20	WDR13 (ENSMLUG00000004001) #21	WAS (ENSMLUG00000016537) #22	SUV39H1 (ENSMLUG00000016544) #23	GLOD5 (ENSMLUG00000030029) #24	ENSMLUG00000009063 #26	HDAC6 (ENSMLUG00000009081) #27	ERAS (ENSMLUG00000028170) #28	PCSK1N (ENSMLUG00000009125) #29	ENSMLUG00000009148 #30	PQBP1 (ENSMLUG00000009159) #31	SLC35A2 (ENSMLUG00000025042) #32	PIM2 (ENSMLUG00000009174) #33	OTUD5 (ENSMLUG00000009195) #34	KCND1 (ENSMLUG00000009225) #35	GRIPAP1 (ENSMLUG00000009232) #36	TFE3 (ENSMLUG00000030217) #37	CCDC120 (ENSMLUG00000010924)
Megabat	MODERN SPECIES	3995									SLC38A5 (ENSPVAG00000015619) #15	FTSJ1 (ENSPVAG00000015621) #16	PORCN (ENSPVAG00000015624) #17	EBP (ENSPVAG00000015627) #18	TBC1D25 (ENSPVAG00000015628) #19	RBM3 (ENSPVAG00000015630) ##20	WDR13 (ENSPVAG00000015631) #21	WAS (ENSPVAG00000015632) #22	SUV39H1 (ENSPVAG00000015633) #23
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Common shrew	MODERN SPECIES	734																WAS (ENSSARG00000001438) #22
Hedgehog	MODERN SPECIES	1190																WAS (ENSEEUG00000005462) #22
Atlantogenata	ANCESTRAL SPECIES	59	ENSGT00390000008631.b	ENSGT00940000154102.b	ENSGT00940000157503 #37	ENSGT00720000108868 #36	ENSGT00940000162057 #35	ENSGT00940000158963 #34	ENSGT00940000161689 #33	ENSGT00950000182827.B #32	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30	ENSGT00390000013488 #29	ENSGT00940000162901 #28	ENSGT00940000159563 #27	ENSGT00940000161156 #26	ENSGT00940000153941.a.b #24	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00940000153524.b.a.a #20	ENSGT00940000159173 #19	ENSGT00530000063715.a #18	ENSGT01030000234564.a.a.b.a #17	ENSGT00730000111146 #16	ENSGT00940000161233 #15	ENSGT00390000012484 #13	ENSGT00940000162921	ENSGT00940000162205 #9	ENSGT00940000162614	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000161209
Xenarthra	ANCESTRAL SPECIES	800												ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000153524.b.a.a.bb.a #20	ENSGT00940000153634.a #21	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23
Armadillo	MODERN SPECIES	2193										ENSDNOG00000041551 #18	TBC1D25 (ENSDNOG00000007135) #19	ENSDNOG00000010420 #20	WDR13 (ENSDNOG00000012751) #21	ENSDNOG00000043712	ENSDNOG00000031239	WAS (ENSDNOG00000034763) #22	SUV39H1 (ENSDNOG00000024286) #23	ENSDNOG00000010600	ENSDNOG00000040933	GATA1 (ENSDNOG00000046529) #26	HDAC6 (ENSDNOG00000002754) #27	ERAS (ENSDNOG00000014657) #28	PCSK1N (ENSDNOG00000045077) #29	TIMM17B (ENSDNOG00000047305) #30	PQBP1 (ENSDNOG00000015637) #31	SLC35A2 (ENSDNOG00000015641) #32	PIM2 (ENSDNOG00000015644) #33	OTUD5 (ENSDNOG00000032210) #34	KCND1 (ENSDNOG00000033902) #35	GRIPAP1 (ENSDNOG00000038321) #36	TFE3 (ENSDNOG00000039173) #37
Afrotheria	ANCESTRAL SPECIES	72	ENSGT00390000008631.b	ENSGT00940000154102.b	ENSGT00940000157503 #37	ENSGT00720000108868 #36	ENSGT00940000162057 #35	ENSGT00940000158963 #34	ENSGT00940000161689 #33	ENSGT00950000182827.B #32	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30	ENSGT00390000013488 #29	ENSGT00940000162901 #28	ENSGT00940000159563 #27	ENSGT00940000161156 #26	ENSGT00940000153941.a.b #24	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00940000153524.b.a.a #20	ENSGT00940000159173 #19	ENSGT00530000063715.a #18	ENSGT01030000234564.a.a.b.a #17	ENSGT00730000111146 #16	ENSGT00940000161233 #15	ENSGT00390000012484 #13	ENSGT00940000162205 #9	ENSGT00940000162614	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000161209	ENSGT00940000161081
Afrotheria_a	ANCESTRAL SPECIES	69	ENSGT00390000008631.b	ENSGT00940000154102.b	ENSGT00940000157503 #37	ENSGT00720000108868 #36	ENSGT00940000162057 #35	ENSGT00940000158963 #34	ENSGT00940000161689 #33	ENSGT00950000182827.B #32	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30	ENSGT00390000013488 #29	ENSGT00940000162901 #28	ENSGT00940000159563 #27	ENSGT00940000161156 #26	ENSGT00940000153941.a.b #24	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00940000153524.b.a.a #20	ENSGT00940000159173 #19	ENSGT00530000063715.a #18	ENSGT01030000234564.a.a.b.a #17	ENSGT00730000111146 #16	ENSGT00940000161233 #15	ENSGT00390000012484 #13	ENSGT00940000162205 #9	ENSGT00940000162614	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000161209	ENSGT00940000161081
Elephant	MODERN SPECIES	453	PRAF2 (ENSLAFG00000010856)	CCDC120 (ENSLAFG00000027582)	TFE3 (ENSLAFG00000025585) #37	GRIPAP1 (ENSLAFG00000032036) #36	KCND1 (ENSLAFG00000010111) #35	OTUD5 (ENSLAFG00000012103) #34	PIM2 (ENSLAFG00000007542) #33	SLC35A2 (ENSLAFG00000007537) #32	PQBP1 (ENSLAFG00000007534) #31	TIMM17B (ENSLAFG00000007531) #30	PCSK1N (ENSLAFG00000030200) #29	ERAS (ENSLAFG00000003828) #28	HDAC6 (ENSLAFG00000003822) #27	GATA1 (ENSLAFG00000029714) #26	GLOD5 (ENSLAFG00000011866) #24	WAS (ENSLAFG00000010329) #22	SUV39H1 (ENSLAFG00000005118) #23	WDR13 (ENSLAFG00000004716) #21	RBM3 (ENSLAFG00000007003) #20	TBC1D25 (ENSLAFG00000004899) #19	PORCN (ENSLAFG00000010030) #17	ENSLAFG00000005437 #18	FTSJ1 (ENSLAFG00000032618) #16	ENSLAFG00000030834 #15	ENSLAFG00000004535 #13	ENSLAFG00000009001 #9	ZNF182 (ENSLAFG00000004532)	UXT (ENSLAFG00000006884)	ELK1 (ENSLAFG00000015524)	CFP (ENSLAFG00000003998)	SYN1 (ENSLAFG00000018085)
Hyrax	MODERN SPECIES	812																WAS (ENSPCAG00000009323) #22
Tenrec	MODERN SPECIES	923																WAS (ENSETEG00000016070) #22
Marsupialia	ANCESTRAL SPECIES	29	ENSGT00940000157503 #37	ENSGT00720000108868 #36	ENSGT00940000162057 #35	ENSGT00940000158963 #34	ENSGT00940000161689 #33	ENSGT00950000182827.B #32	ENSGT00950000183102.C.f #31	ENSGT00390000017780.e #30	ENSGT00940000159128	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00390000017352.a	ENSGT00390000006665.b	ENSGT00940000153231.A	ENSGT00390000012929	ENSGT00940000160369	ENSGT00940000158975	ENSGT00940000160485	ENSGT00940000156963.a.b
Opossum	MODERN SPECIES	627	TFE3 (ENSMODG00000009925) #37	GRIPAP1 (ENSMODG00000010018) #36	ENSMODG00000010033 #35	PIM2 (ENSMODG00000010037) #33	SLC35A2 (ENSMODG00000010048) #32	ENSMODG00000010063 #31	TIMM17B (ENSMODG00000010069) #30	CDK20 (ENSMODG00000010092)	GATA1 (ENSMODG00000010099) #26	ENSMODG00000044553	HDAC6 (ENSMODG00000010166) #27	PORCN (ENSMODG00000010236) #17	EBP (ENSMODG00000010248) #18	TBC1D25 (ENSMODG00000010259) #19	ENSMODG00000010292 #15	WAS (ENSMODG00000010317) #22	SUV39H1 (ENSMODG00000010324) #23	WDR13 (ENSMODG00000010303) #21	ENSMODG00000043220	GRM6 (ENSMODG00000010422)	ABT1 (ENSMODG00000010429)	ENSMODG00000010534	CXXC1 (ENSMODG00000010555)	ENSMODG00000037413	MON1B (ENSMODG00000010558)	ENSMODG00000010588	IMP4 (ENSMODG00000010577)	RBM10 (ENSMODG00000010640)	UBA1 (ENSMODG00000010677)	USP11 (ENSMODG00000010726)	CDK16 (ENSMODG00000010767)
Marsupialia_b	ANCESTRAL SPECIES	31				ENSGT00940000158963.c #34	ENSGT00940000161689 #33	ENSGT00950000182827.B #32	ENSGT00950000183102.C.f #31	ENSGT00390000017780.e #30	ENSGT00940000159128	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044.a	ENSGT00730000111044.b	ENSGT00390000017352.a	ENSGT00390000006665.b	ENSGT00940000153231.A	ENSGT00940000160369.a	ENSGT00940000158975.e	ENSGT00940000160485	ENSGT00940000156963.a.b
Diprotodontia	ANCESTRAL SPECIES	60				ENSGT00940000158963.c #34	ENSGT00940000161689 #33	ENSGT00950000182827.B #32	ENSGT00950000183102.C.f #31	ENSGT00390000017780.e #30	ENSGT00940000159128	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b.g	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044.a	ENSGT00390000006665.b	ENSGT00940000153231.A	ENSGT00940000160369.a	ENSGT00940000158975.e	ENSGT00940000160485	ENSGT00940000156963.a.b	ENSGT00390000018078	ENSGT00940000157571
Diprotodontia_a	ANCESTRAL SPECIES	58				ENSGT00940000158963.c #34	ENSGT00940000161689 #33	ENSGT00950000182827.B #32	ENSGT00950000183102.C.f #31	ENSGT00390000017780.e #30	ENSGT00940000159128	ENSGT00940000161156 #26	ENSGT00940000159563 #27	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b.g	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044.a	ENSGT00390000006665.b	ENSGT00940000153231.A	ENSGT00940000160369.a	ENSGT00940000158975.e	ENSGT00940000160485	ENSGT00940000156963.a.b	ENSGT00390000018078	ENSGT00940000157571
Common wonbat	MODERN SPECIES	1079	TFE3 (ENSVURG00010010649) #37	GRIPAP1 (ENSVURG00010010555) #36	ENSVURG00010010519	ENSVURG00010010507 #34	PIM2 (ENSVURG00010010500) #33	SLC35A2 (ENSVURG00010010497) #32	ENSVURG00010010494 #31	TIMM17B (ENSVURG00010010486) #30	CDK20 (ENSVURG00010010475)	GATA1 (ENSVURG00010010465) #26	HDAC6 (ENSVURG00010010455) #27	PORCN (ENSVURG00010010369) #17	EBP (ENSVURG00010010353) #18	TBC1D25 (ENSVURG00010010343) #19	SLC38A5 (ENSVURG00010010329) #15	WAS (ENSVURG00010010322) #22	ENSVURG00010010306	ABT1 (ENSVURG00010010299)
Wallaby	MODERN SPECIES	2103															SLC38A5 (ENSMEUG00000009588) #15	ENSMEUG00000009617 #22
Tasmanian devil	MODERN SPECIES	21	ENSSHAG00000027473	ENSSHAG00000031604	TFE3 (ENSSHAG00000003327) #37	GRIPAP1 (ENSSHAG00000003080) #36	ENSSHAG00000002843	PIM2 (ENSSHAG00000022404) #33	OTUD5 (ENSSHAG00000024529) #34	ENSSHAG00000021727	ENSSHAG00000001555 #30	ENSSHAG00000021486	ENSSHAG00000021720 #26	ENSSHAG00000001040 #27	ENSSHAG00000001709 #31	ENSSHAG00000032369 #17	ENSSHAG00000000940 #19	ENSSHAG00000002882 #22	ENSSHAG00000022637 #15	ENSSHAG00000000138 #23	ENSSHAG00000001207 #21	ENSSHAG00000028465	ENSSHAG00000003137	ENSSHAG00000003493	ENSSHAG00000003661	ENSSHAG00000003967	ENSSHAG00000008525	ENSSHAG00000008415	ENSSHAG00000008267	ENSSHAG00000007724	ENSSHAG00000007608	ENSSHAG00000007468	ENSSHAG00000007378
Platypus	MODERN SPECIES	17	ENSOANG00000013573	OTUD5 (ENSOANG00000043640) #34	ENSOANG00000038972 #33	SLC35A2 (ENSOANG00000048927) #32	PQBP1 (ENSOANG00000031396) #31	TIMM17B (ENSOANG00000014281) #30	CDK20 (ENSOANG00000010766)	GATA1 (ENSOANG00000010765) #26	HDAC6 (ENSOANG00000002256) #27	ENSOANG00000047880 #16	PORCN (ENSOANG00000005775) #17	EBP (ENSOANG00000012972) #18	TBC1D25 (ENSOANG00000038580) #19	ENSOANG00000014584	SLC38A5 (ENSOANG00000036935) #15	WAS (ENSOANG00000015230) #22	SUV39H1 (ENSOANG00000015959) #23	WDR13 (ENSOANG00000006932) #21	ENSOANG00000038903	GRM6 (ENSOANG00000014586)	ABT1 (ENSOANG00000014590)	ENSOANG00000051319	ENSOANG00000042027	CXXC1 (ENSOANG00000014594)	MON1B (ENSOANG00000039235)	ENSOANG00000014597	IMP4 (ENSOANG00000014598)	ENSOANG00000047650	ENSOANG00000004774	ENSOANG00000004550	RBM10 (ENSOANG00000004552)
Sauria	ANCESTRAL SPECIES	56										ENSGT00730000111146 #16	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00390000017352	ENSGT00390000006665.b	ENSGT00940000153231.A	ENSGT00390000012929	ENSGT00390000016016.B	ENSGT00940000160369	ENSGT00390000003022	ENSGT00940000165541
Lepidosauria	ANCESTRAL SPECIES	38	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00730000111146 #16	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062
Episquamata	ANCESTRAL SPECIES	23	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000155472.a.a	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00730000111146 #16	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00940000153524.b.b ##20	ENSGT00940000165391	ENSGT00940000159227	ENSGT00950000184155.a.b
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00730000111146 #16	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00940000153524.b.b ##20	ENSGT00940000165391	ENSGT00940000159227	ENSGT00950000184155.a.b
Elapidae	ANCESTRAL SPECIES	21	ENSGT00940000158963 #34	ENSGT00940000155472.a.a	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00730000111146 #16	ENSGT00940000166825	ENSGT00530000063715.a.t #18	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a.s #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00940000153524.b.b ##20	ENSGT00940000165391	ENSGT00940000161810.a.b	ENSGT00940000159227	ENSGT00950000184155.a.b
Indian cobra	MODERN SPECIES	1	OTUD5 (ENSNNAG00000011281) #34	ENSNNAG00000011249	GRIPAP1 (ENSNNAG00000010983) #36	TFE3 (ENSNNAG00000010930) #37	CCDC120 (ENSNNAG00000010874)	PRAF2 (ENSNNAG00000010800)	WDR45 (ENSNNAG00000010759)	GPKOW (ENSNNAG00000010730)	FTSJ1 (ENSNNAG00000010700) #16	ENSNNAG00000010677 #18	ENSNNAG00000010633 #18	PORCN (ENSNNAG00000010535) #17	ENSNNAG00000010495 #18	TBC1D25 (ENSNNAG00000010438) #19	SLC38A5 (ENSNNAG00000009453) #15	WAS (ENSNNAG00000009371) #22	SUV39H1 (ENSNNAG00000009353) #23	WDR13 (ENSNNAG00000009312) #21	GRM6 (ENSNNAG00000008590)	ABT1 (ENSNNAG00000008508)	ENSNNAG00000008480 ##20	RBM3 (ENSNNAG00000008459) ##20	ENSNNAG00000008430	ENSNNAG00000008413	ENSNNAG00000008382	ENSNNAG00000007772	ENSNNAG00000007634	OR1N2 (ENSNNAG00000007596)	ENSNNAG00000007556	ENSNNAG00000007534	ENSNNAG00000007519
Elapidae_a	ANCESTRAL SPECIES	23	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000155472.a.a	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00730000111146 #16	ENSGT00530000063715.a.t #18	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a.s #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00940000153524.b.b ##20	ENSGT00940000165391	ENSGT00940000161810.a.b	ENSGT00940000159227	ENSGT00950000184155.a.b	ENSGT00940000161810.a.a	ENSGT00940000163103	ENSGT00940000153683.a.b	ENSGT00940000162852.b.a.a.b.a.e	ENSGT00940000162852.b.a.a.b.a.f	ENSGT00940000162852.b.a.a.b.b.a
Acanthophiinae	ANCESTRAL SPECIES	23	ENSGT00950000182827.B #32	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00730000111146 #16	ENSGT00530000063715.a.t #18	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a.s #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00940000153524.b.b ##20	ENSGT00940000165391	ENSGT00940000161810.a.b	ENSGT00940000159227	ENSGT00950000184155.a.b	ENSGT00940000161810.a.a	ENSGT00940000163103	ENSGT00940000153683.a.b	ENSGT00940000162852.b.a.a.b.a.e	ENSGT00940000162852.b.a.a.b.a.f	ENSGT00940000162852.b.a.a.b.b.a
Eastern brown snake	MODERN SPECIES	52	OTUD5 (ENSPTXG00000008201) #34	ENSPTXG00000008205	GRIPAP1 (ENSPTXG00000008207) #36	TFE3 (ENSPTXG00000008211) #37	CCDC120 (ENSPTXG00000008213)	PRAF2 (ENSPTXG00000008251)	WDR45 (ENSPTXG00000008253)	GPKOW (ENSPTXG00000008255)	FTSJ1 (ENSPTXG00000008257) #16	ENSPTXG00000008258 #18	ENSPTXG00000008259	PORCN (ENSPTXG00000008260) #17	ENSPTXG00000008261 #18	TBC1D25 (ENSPTXG00000008263) #19	SLC38A5 (ENSPTXG00000008266) #15	WAS (ENSPTXG00000008271) #22	SUV39H1 (ENSPTXG00000008273) #23	WDR13 (ENSPTXG00000008274) #21	GRM6 (ENSPTXG00000008284)	ABT1 (ENSPTXG00000008493)	ENSPTXG00000008494 ##20	RBM3 (ENSPTXG00000008495) ##20	ENSPTXG00000008496	ENSPTXG00000008497	ENSPTXG00000008498	ENSPTXG00000008499	ENSPTXG00000008953	OR1N2 (ENSPTXG00000008954)	ENSPTXG00000008955	ENSPTXG00000008956	ENSPTXG00000008958
Mainland tiger snake	MODERN SPECIES	81	PIM2 (ENSNSUG00000019823) #33	OTUD5 (ENSNSUG00000019824) #34	ENSNSUG00000019825	GRIPAP1 (ENSNSUG00000019826) #36	TFE3 (ENSNSUG00000019827) #37	CCDC120 (ENSNSUG00000019828)	PRAF2 (ENSNSUG00000019829)	WDR45 (ENSNSUG00000019830)	GPKOW (ENSNSUG00000019831)	FTSJ1 (ENSNSUG00000019832) #16	ENSNSUG00000019833 #18	PORCN (ENSNSUG00000019834) #17	ENSNSUG00000019865 #18	TBC1D25 (ENSNSUG00000000006) #19	SLC38A5 (ENSNSUG00000000035) #15	WAS (ENSNSUG00000000092) #22	SUV39H1 (ENSNSUG00000000131) #23	WDR13 (ENSNSUG00000000218) #21	GRM6 (ENSNSUG00000000257)	ABT1 (ENSNSUG00000001065)	ENSNSUG00000001066 ##20	RBM3 (ENSNSUG00000001070) ##20	ENSNSUG00000001072	ENSNSUG00000001075	ENSNSUG00000001078	ENSNSUG00000001080	SPACA3 (ENSNSUG00000001171)	OR1K1 (ENSNSUG00000001179)	ENSNSUG00000001181	ENSNSUG00000001188	ENSNSUG00000001192
Blue-lipped sea krait	MODERN SPECIES	7045														TBC1D25 (ENSLLTG00000005034) #19	SLC38A5 (ENSLLTG00000004982) #15	WAS (ENSLLTG00000004871) #22	SUV39H1 (ENSLLTG00000004853) #23	WDR13 (ENSLLTG00000004833) #21
Lizard	MODERN SPECIES	1	ENSACAG00000005821	ccdc115 (ENSACAG00000041874)	ENSACAG00000005882	ENSACAG00000005949	ENSACAG00000006058	ENSACAG00000006080	ENSACAG00000006087	ENSACAG00000041420	ENSACAG00000036991	ENSACAG00000006125	ENSACAG00000006169	ENSACAG00000025194	ENSACAG00000044448	ENSACAG00000006227 #19	ENSACAG00000006254 #15	WAS (ENSACAG00000006303) #22	ENSACAG00000006321 #23	ENSACAG00000006342 #21	ENSACAG00000036004	ENSACAG00000006403	ENSACAG00000006406	ENSACAG00000006636	ESPL1 (ENSACAG00000006650)	ENSACAG00000006758	MFSD5 (ENSACAG00000006761)	ENSACAG00000044779	ENSACAG00000006765	ENSACAG00000006796	RARG (ENSACAG00000006832)	ITGB7 (ENSACAG00000006931)	ZNF740 (ENSACAG00000006993)
Laterata	ANCESTRAL SPECIES	7	ENSGT00940000161689 #33	ENSGT00940000158963 #34	ENSGT00940000155472.a.a	ENSGT00720000108868 #36	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00730000111146 #16	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00940000153524.b.b ##20	ENSGT00940000159227	ENSGT00950000184155.a.b	ENSGT00940000153683.a.b	ENSGT00940000162852.b.a.a.b.a.d	ENSGT00940000162852.b.a.a.b.b.a	ENSGT00940000153683.a.a
Common wall lizard	MODERN SPECIES	8	GRIPAP1 (ENSPMRG00000018908) #36	TFE3 (ENSPMRG00000018894) #37	CCDC120 (ENSPMRG00000018879)	ENSPMRG00000018863	PRAF2 (ENSPMRG00000018857)	WDR45 (ENSPMRG00000018757)	GPKOW (ENSPMRG00000018732)	FTSJ1 (ENSPMRG00000018723) #16	ENSPMRG00000018717	PORCN (ENSPMRG00000018707) #17	EBP (ENSPMRG00000018698) #18	ENSPMRG00000018690	ENSPMRG00000018683 #19	SLC38A5 (ENSPMRG00000018673) #15	ENSPMRG00000018667	WAS (ENSPMRG00000018659) #22	SUV39H1 (ENSPMRG00000018649) #23	WDR13 (ENSPMRG00000018635) #21	ENSPMRG00000018623	GRM6 (ENSPMRG00000018607)	ABT1 (ENSPMRG00000018603)	ENSPMRG00000018593 ##20	ENSPMRG00000018587 ##20	ENSPMRG00000018585	ENSPMRG00000018579	ENSPMRG00000018574	ENSPMRG00000018568	SPACA3 (ENSPMRG00000018537)	ENSPMRG00000018521	ENSPMRG00000018519	ENSPMRG00000018507
tuatara	MODERN SPECIES	288																WAS (ENSSPUG00000016915) #22	SUV39H1 (ENSSPUG00000016950) #23	WDR13 (ENSSPUG00000016962) #21
Archelosauria	ANCESTRAL SPECIES	68											ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00390000017352	ENSGT00390000006665.b	ENSGT00940000153231.A	ENSGT00390000012929
Archosauria	ANCESTRAL SPECIES	116															ENSGT00940000159173 #19	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21
Aves	ANCESTRAL SPECIES	112															ENSGT00940000159173 #19	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21
Neognathae	ANCESTRAL SPECIES	76															ENSGT00940000159173 #19	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000018621	ENSGT00390000011863.c
Neognathae_b	ANCESTRAL SPECIES	70															ENSGT00940000159173 #19	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000018621	ENSGT00390000011863.c
Passeriformes	ANCESTRAL SPECIES	89															ENSGT00940000159173 #19	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000018621	ENSGT00390000011863.c
Passeriformes_d	ANCESTRAL SPECIES	83															ENSGT00940000159173 #19	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000018621	ENSGT00390000011863.c
Passeriformes_g	ANCESTRAL SPECIES	94															ENSGT00940000159173 #19	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000018621	ENSGT00390000011863.c
Passeroidea	ANCESTRAL SPECIES	101															ENSGT00940000159173 #19	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000018621	ENSGT00390000011863.c
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	38	ENSTGUG00000018838	IQSEC2 (ENSTGUG00000028800)	ENSTGUG00000020652	ENSTGUG00000027792	ENSTGUG00000029115	ENSTGUG00000022468	ENSTGUG00000020448	ENSTGUG00000023731	ENSTGUG00000015458	ENSTGUG00000015465	ENSTGUG00000021389	ENSTGUG00000028745	ENSTGUG00000028409	ENSTGUG00000026008	ENSTGUG00000019864 #19	ENSTGUG00000019181 #22	ENSTGUG00000016885 #23	ENSTGUG00000028534 #21	ENSTGUG00000023830	ENSTGUG00000022053	ENSTGUG00000019600	ENSTGUG00000024745	ENSTGUG00000021254	ENSTGUG00000020036	ENSTGUG00000021834	ENSTGUG00000028475	ENSTGUG00000017464	ENSTGUG00000021680	ENSTGUG00000029006	ENSTGUG00000029370	ENSTGUG00000019992
Zebra finch	MODERN SPECIES	38	ENSTGUG00000020652	IQSEC2 (ENSTGUG00000028800)	ENSTGUG00000018838	ENSTGUG00000023365	CACNA1F (ENSTGUG00000029419)	ENSTGUG00000029683	ENSTGUG00000021437	ENSTGUG00000015447	ENSTGUG00000025749	ENSTGUG00000020537	ENSTGUG00000028948	TRMT112 (ENSTGUG00000026050)	ENSTGUG00000026133	ENSTGUG00000023429 #36	ENSTGUG00000025676 #19	ENSTGUG00000028030 #22	ENSTGUG00000026708 #23	ENSTGUG00000023010 #21	ENSTGUG00000020916	ENSTGUG00000020650	ENSTGUG00000023057	ENSTGUG00000019880	ENSTGUG00000019525	ENSTGUG00000019253	ENSTGUG00000025859	ENSTGUG00000023188	SWS2 (ENSTGUG00000026520)	LWS (ENSTGUG00000020605)	ENSTGUG00000022784	ENSTGUG00000026390	ENSTGUG00000024305 ##18
Neognathae_c	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Kakapo	MODERN SPECIES	27	UBL4A (ENSSHBG00005007963)	ENSSHBG00005007944	ATP6AP1 (ENSSHBG00005007878)	SYP (ENSSHBG00005007854)	MECP2 (ENSSHBG00005007709)	CCDC120 (ENSSHBG00005007693)	ENSSHBG00005007668 ##18	OTUD5 (ENSSHBG00005007642) #34	SRPK3 (ENSSHBG00005007575)	IDH3G (ENSSHBG00005007512)	SSR4 (ENSSHBG00005007493)	L1CAM (ENSSHBG00005007471)	PDZD4 (ENSSHBG00005007435)	ENSSHBG00005007409	GRIPAP1 (ENSSHBG00005007370) #36	WAS (ENSSHBG00005007327) #22	ENSSHBG00005007307
Galloanserae	ANCESTRAL SPECIES	79															ENSGT00940000159173 #19	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000018621	ENSGT00390000011863.c
Phasianidae	ANCESTRAL SPECIES	55															ENSGT00940000159173 #19	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000018621	ENSGT00390000011863.c
Japanese quail	MODERN SPECIES	71													ENSCJPG00005003856 #34	ENSCJPG00005003857 ##18	TBC1D25 (ENSCJPG00005003862) #19	WAS (ENSCJPG00005003863) #22	SUV39H1 (ENSCJPG00005003870) #23	WDR13 (ENSCJPG00005003871) #21	TAFAZZIN (ENSCJPG00005003875)	BCAP31 (ENSCJPG00005003883)
Cryptodira	ANCESTRAL SPECIES	81								ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00390000017352	ENSGT00390000006665.b	ENSGT00940000153231.A	ENSGT00390000012929
Testudinoidea	ANCESTRAL SPECIES	40	ENSGT00940000155614	ENSGT00950000185120	ENSGT00940000159667	ENSGT00940000164196	ENSGT00390000002034	ENSGT00390000012715.a	ENSGT01030000234637.b.c	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b.e	ENSGT01030000234648.a.b.a.b.f	ENSGT00390000002062	ENSGT00940000153832.e.b	ENSGT00940000153832.e.a	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00390000006665.b	ENSGT00940000158975	ENSGT00940000165541	ENSGT00390000003022	ENSGT00940000160369.g
Testudinidae	ANCESTRAL SPECIES	46	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000159667	ENSGT00940000164196	ENSGT00390000002034	ENSGT00390000012715.a	ENSGT01030000234637.b.c	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b.e	ENSGT01030000234648.a.b.a.b.f	ENSGT00390000002062	ENSGT00940000153832.e.b	ENSGT00940000153832.e.a	ENSGT00930000151076	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00390000006665.b	ENSGT00940000158975	ENSGT00940000165541	ENSGT00390000003022
Goode s thornscrub tortoise	MODERN SPECIES	169	SMC1A (ENSGEVG00005019651)	IQSEC2 (ENSGEVG00005019635)	ENSGEVG00005019622	ENSGEVG00005017400	ENSGEVG00005016743	TREX2 (ENSGEVG00005016725)	SYP (ENSGEVG00005016630)	TFE3 (ENSGEVG00005016568) #37	PRAF2 (ENSGEVG00005016535)	ENSGEVG00005016522	FTSJ1 (ENSGEVG00005016503) #16	PORCN (ENSGEVG00005016430) #17	EBP (ENSGEVG00005016402) #18	TBC1D25 (ENSGEVG00005016385) #19	SLC38A5 (ENSGEVG00005016347) #15	WAS (ENSGEVG00005016334) #22	SUV39H1 (ENSGEVG00005016238) #23	WDR13 (ENSGEVG00005016183) #21	ENSGEVG00005016121	GRM6 (ENSGEVG00005015118)	ABT1 (ENSGEVG00005014911)	ENSGEVG00005014832	ENSGEVG00005014706	ENSGEVG00005014664	ENSGEVG00005014600	ENSGEVG00005014403	CXXC1 (ENSGEVG00005014332)	ENSGEVG00005014316	ENSGEVG00005014031	ENSGEVG00005013936	ENSGEVG00005013905
Abingdon island giant tortoise	MODERN SPECIES	2751	GPKOW (ENSCABG00000014748)	HSD17B10 (ENSCABG00000014750)	RIBC1 (ENSCABG00000014752)	SMC1A (ENSCABG00000014810)	IQSEC2 (ENSCABG00000016172)	ENSCABG00000016173	SYP (ENSCABG00000016175)	TFE3 (ENSCABG00000016176) #37	CCDC120 (ENSCABG00000016178)	PRAF2 (ENSCABG00000016179)	FTSJ1 (ENSCABG00000016180) #16	PORCN (ENSCABG00000016181) #17	EBP (ENSCABG00000016236) #18	TBC1D25 (ENSCABG00000016239) #19	SLC38A5 (ENSCABG00000016241) #15	WAS (ENSCABG00000016243) #22	SUV39H1 (ENSCABG00000016244) #23	ENSCABG00000016250 #21	GRM6 (ENSCABG00000016254)	ENSCABG00000016396	ENSCABG00000016401	ENSCABG00000016405	ENSCABG00000016413	ENSCABG00000016414	ENSCABG00000016418	CXXC1 (ENSCABG00000016437)	MON1B (ENSCABG00000016441)	ENSCABG00000016443	ENSCABG00000016444	IMP4 (ENSCABG00000016445)	ENSCABG00000016446
Emydidae	ANCESTRAL SPECIES	59	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00950000185120	ENSGT00940000159667	ENSGT00940000164196	ENSGT00390000012715.a	ENSGT01030000234637.b.c	ENSGT00940000157503 #37	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00730000111146 #16	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a.q #18	ENSGT00940000159173 #19	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT01030000234648.a.b.a.b.f	ENSGT00390000002062	ENSGT00940000153832.e.b	ENSGT00940000153832.e.a	ENSGT00730000111044	ENSGT00390000006665.b	ENSGT00940000153231.A	ENSGT00390000012929
painted turtle	MODERN SPECIES	1396											ENSCPBG00000007462	PORCN (ENSCPBG00000007475) #17	EBP (ENSCPBG00000007481) #18	TBC1D25 (ENSCPBG00000007487) #19	SLC38A5 (ENSCPBG00000007493) #15	WAS (ENSCPBG00000007499) #22	SUV39H1 (ENSCPBG00000007510) #23	WDR13 (ENSCPBG00000007697) #21
Anura	ANCESTRAL SPECIES	270							ENSGT00390000017352	ENSGT00390000018525.b	ENSGT00730000111146 #16	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a #17	ENSGT00530000063715.a #18	ENSGT00940000159173 #19	ENSGT00940000163461.a.a.b.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22
Leishan spiny toad	MODERN SPECIES	1514																WAS (ENSLLEG00000025577) #22
Frog	MODERN SPECIES	8	rhoa.2 (ENSXETG00000009241)	ENSXETG00000041659	arhgef3.1 (ENSXETG00000025462)	imp4 (ENSXETG00000045525)	XB5795058 [provisional] (ENSXETG00000036260)	sft2d3 (ENSXETG00000045709)	ENSXETG00000043115	ENSXETG00000044331 #16	syce1 (ENSXETG00000041899)	ENSXETG00000042195	ENSXETG00000045103	ENSXETG00000046518 #19	myh2 (ENSXETG00000045699)	ENSXETG00000044448	slc38a5 (ENSXETG00000011939) #15	was (ENSXETG00000046239) #22	ENSXETG00000046491	ENSXETG00000045063	hdac6 (ENSXETG00000023355) #27	cxxc1 (ENSXETG00000021938)	ENSXETG00000046390	gata1 (ENSXETG00000018547) #26	ENSXETG00000042105	mbd1 (ENSXETG00000040845)	ENSXETG00000046264	ENSXETG00000045668	ENSXETG00000037593	ENSXETG00000049290	ENSXETG00000031005	ENSXETG00000021909	ENSXETG00000049034
Actinopterygii	ANCESTRAL SPECIES	293										ENSGT01100000265223	ENSGT00940000159667	ENSGT00940000164196	ENSGT00940000161807	ENSGT00390000003809	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000166378	ENSGT00940000165056	ENSGT00530000063540.a	ENSGT00940000154471.a.a	ENSGT00940000164911	ENSGT00390000013740
Neopterygii	ANCESTRAL SPECIES	221										ENSGT00530000063715.a #18	ENSGT01030000234564.a.a.b.a #17	ENSGT00940000166825	ENSGT00940000153634.a #21	ENSGT00390000003809	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000166378	ENSGT00940000165056	ENSGT00530000063540.a	ENSGT00940000154471.a.a	ENSGT00940000164911	ENSGT00390000011228.b.a	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00390000013740	ENSGT00940000161131.a.a
Osteoglossocephalai	ANCESTRAL SPECIES	536														ENSGT00390000003809	ENSGT00940000166636	ENSGT00730000110895.b.b #22	ENSGT00940000165056.a
Clupeocephala	ANCESTRAL SPECIES	367											ENSGT00940000159173 #19	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000160063.g.b #23	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00950000183062.a.b.b.a
Euteleosteomorpha	ANCESTRAL SPECIES	2	ENSGT00390000008714.a	ENSGT00940000162660.a	ENSGT00940000155311.C.d	ENSGT00940000164248.b.a	ENSGT00940000153541.B	ENSGT00390000016016.B	ENSGT00950000182945.b.a.a.a.b.b.c.b	ENSGT00950000182945.b.a.a.a.b.b.d	ENSGT00390000003022	ENSGT00440000038972	ENSGT00940000159173 #19	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000160063.g.b #23	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00940000164755.C	ENSGT00940000164755.B
Acanthomorphata	ANCESTRAL SPECIES	3	ENSGT00940000159408	ENSGT00860000133842.n	ENSGT00940000167132	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.C	ENSGT00940000164755.B	ENSGT00940000164755.D	ENSGT00390000015154
Euacanthomorphacea	ANCESTRAL SPECIES	2	ENSGT00940000159408	ENSGT00860000133842.n	ENSGT00940000167132	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.C	ENSGT00940000164755.B	ENSGT00940000164755.D	ENSGT00390000015154
Percomorphaceae	ANCESTRAL SPECIES	7	ENSGT00940000159408	ENSGT00860000133842.n	ENSGT00940000167132	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00940000164755.C	ENSGT00940000164755.B	ENSGT00390000015154
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00940000159408.u.b	ENSGT00860000133842.n	ENSGT00940000167132	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.C	ENSGT00940000164755.B	ENSGT00940000164755.D	ENSGT00390000015154
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00940000159408.u.b	ENSGT00860000133842.n	ENSGT00940000167132	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00970000193554	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000167132	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00770000121758	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000167132	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00970000193554	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00770000121758	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31
Cyprinodontoidei	ANCESTRAL SPECIES	3	ENSGT00940000159408.v.m	ENSGT00860000133842.n	ENSGT00940000167132	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00770000121758	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00940000159408.v.m.a	ENSGT00860000133842.n	ENSGT00940000167132	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b.f	ENSGT00940000178145	ENSGT00940000165056.b.e	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00770000121758	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154
Poecilia	ANCESTRAL SPECIES	14	ENSGT00940000159408.v.m.b	ENSGT00940000159408.v.m.a	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b.f	ENSGT00940000178145	ENSGT00940000165056.b.e	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00770000121758	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154
NAME_6	ANCESTRAL SPECIES	23	ENSGT00940000159408.v.m.b	ENSGT00940000159408.v.m.a	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b.f	ENSGT00940000178145	ENSGT00940000165056.b.e	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00770000121758	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154
Sailfin molly	MODERN SPECIES	36	ENSPLAG00000002171	dnajc11a (ENSPLAG00000002151)	CAMTA1 (ENSPLAG00000002110)	ENSPLAG00000002085	uts2a (ENSPLAG00000002067)	ENSPLAG00000002052	tnfrsf9a (ENSPLAG00000002044)	dvl1b (ENSPLAG00000002028)	mxra8b (ENSPLAG00000002002)	aurkaip1 (ENSPLAG00000001993)	rap1gapa (ENSPLAG00000000502)	nt5dc2 (ENSPLAG00000023918)	zgc:162200 (ENSPLAG00000023863)	apex2 (ENSPLAG00000023814)	SLC38A5 (ENSPLAG00000023773) #15	ENSPLAG00000023747 #22	sema3ga (ENSPLAG00000023725)	ENSPLAG00000023572	tspy (ENSPLAG00000023554)	ENSPLAG00000023533	gpr173 (ENSPLAG00000023524)	wdr13 (ENSPLAG00000023493) #21	si:ch211-255g12.6 (ENSPLAG00000023454)	porcn (ENSPLAG00000023438) #17	PDZD4 (ENSPLAG00000023406)	kdm5c (ENSPLAG00000023378)	IQSEC2 (ENSPLAG00000023345)	ENSPLAG00000023106	gpkow (ENSPLAG00000023097)	pqbp1 (ENSPLAG00000023087) #31	timm17b (ENSPLAG00000023052) #30
Amazon molly	MODERN SPECIES	308							tnfrsf9a (ENSPFOG00000000105)	DVL1 (ENSPFOG00000000114)	mxra8b (ENSPFOG00000023930)	aurkaip1 (ENSPFOG00000000146)	rap1gapa (ENSPFOG00000000156)	nt5dc2 (ENSPFOG00000000278)	zgc:162200 (ENSPFOG00000000351)	apex2 (ENSPFOG00000000408)	SLC38A5 (ENSPFOG00000000455) #15	WAS (ENSPFOG00000000587) #22	sema3ga (ENSPFOG00000000716)	sema3ga (ENSPFOG00000000996)	tspy (ENSPFOG00000001084)	ENSPFOG00000001127	gpr173 (ENSPFOG00000024213)	wdr13 (ENSPFOG00000001197) #21	si:ch211-255g12.6 (ENSPFOG00000001369)	porcn (ENSPFOG00000001427) #17	ENSPFOG00000022082	PDZD4 (ENSPFOG00000001555)	kdm5c (ENSPFOG00000001947)	IQSEC2 (ENSPFOG00000024284)	ENSPFOG00000002949	gpkow (ENSPFOG00000003065)	pqbp1 (ENSPFOG00000003147) #31
Guppy	MODERN SPECIES	459	ENSPREG00000003864	ENSPREG00000003812	ENSPREG00000003789	dnajc11a (ENSPREG00000003758)	CAMTA1 (ENSPREG00000003688)	uts2a (ENSPREG00000003617)	ccdc187 (ENSPREG00000003586)	tnfrsf9a (ENSPREG00000003503)	dvl1b (ENSPREG00000003439)	mxra8b (ENSPREG00000003404)	aurkaip1 (ENSPREG00000003352)	rap1gapa (ENSPREG00000003273)	nt5dc2 (ENSPREG00000003225)	zgc:162200 (ENSPREG00000003203)	SLC38A5 (ENSPREG00000003094) #15	WAS (ENSPREG00000003049) #22	ENSPREG00000003039	sema3ga (ENSPREG00000002971)	tspy (ENSPREG00000002941)	ENSPREG00000002925	gpr173 (ENSPREG00000002919)	wdr13 (ENSPREG00000002898) #21	si:ch211-255g12.6 (ENSPREG00000002889)	porcn (ENSPREG00000002862) #17	ENSPREG00000002849	PDZD4 (ENSPREG00000002792)	kdm5c (ENSPREG00000002759)	IQSEC2 (ENSPREG00000002735)	ENSPREG00000002687	gpkow (ENSPREG00000002671)	pqbp1 (ENSPREG00000002645) #31
Platyfish	MODERN SPECIES		ENSXMAG00000016206	dnajc11a (ENSXMAG00000016178)	ENSXMAG00000025080	CAMTA1 (ENSXMAG00000016167)	uts2a (ENSXMAG00000016163)	ENSXMAG00000016154	tnfrsf9a (ENSXMAG00000016152)	dvl1b (ENSXMAG00000016128)	mxra8b (ENSXMAG00000012814)	aurkaip1 (ENSXMAG00000029102)	rap1gapa (ENSXMAG00000012787)	nt5dc2 (ENSXMAG00000016109)	zgc:162200 (ENSXMAG00000016097)	apex2 (ENSXMAG00000025740)	SLC38A5 (ENSXMAG00000018421) #15	WAS (ENSXMAG00000018412) #22	sema3ga (ENSXMAG00000018358)	ENSXMAG00000028222	tspy (ENSXMAG00000018350)	ENSXMAG00000021637	gpr173 (ENSXMAG00000018346)	wdr13 (ENSXMAG00000018325) #21	si:ch211-255g12.6 (ENSXMAG00000018322)	porcn (ENSXMAG00000018319) #17	PDZD4 (ENSXMAG00000018310)	kdm5c (ENSXMAG00000018246)	IQSEC2 (ENSXMAG00000027672)	ENSXMAG00000027551	gpkow (ENSXMAG00000018216)	pqbp1 (ENSXMAG00000018212) #31	timm17b (ENSXMAG00000018200) #30
Oryzias	ANCESTRAL SPECIES	4	ENSGT00940000153675.a.b.b	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00770000121758	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D.p	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30
Oryzias_a	ANCESTRAL SPECIES		ENSGT00940000153675.a.a.a.b	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00770000121758	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D.p	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30
Japanese Medaka HdrR	MODERN SPECIES	21	ENSORLG00000022371	fbxo44.3 (ENSORLG00000013772)	dnajc11a (ENSORLG00000013823)	CAMTA1 (ENSORLG00000013886)	uts2a (ENSORLG00000013890)	ENSORLG00000013900	ENSORLG00000013910	dvl1b (ENSORLG00000013944)	mxra8b (ENSORLG00000013955)	aurkaip1 (ENSORLG00000013963)	rap1gapa (ENSORLG00000013991)	nt5dc2 (ENSORLG00000014013)	zgc:162200 (ENSORLG00000014036)	apex2 (ENSORLG00000014053)	ENSORLG00000014108 #15	WAS (ENSORLG00000014142) #22	sema3ga (ENSORLG00000014173)	tspy (ENSORLG00000014193)	ENSORLG00000014198	ENSORLG00000014205	wdr13 (ENSORLG00000014232) #21	porcn (ENSORLG00000014269) #17	si:ch211-255g12.6 (ENSORLG00000028016)	ENSORLG00000014279	PDZD4 (ENSORLG00000014289)	kdm5c (ENSORLG00000014361)	IQSEC2 (ENSORLG00000014384)	ENSORLG00000014419	ENSORLG00000022586	gpkow (ENSORLG00000014442)	pqbp1 (ENSORLG00000014458) #31
Chinese medaka	MODERN SPECIES	38	ENSOSIG00000004161	ENSOSIG00000004166	dnajc11a (ENSOSIG00000004197)	CAMTA1 (ENSOSIG00000004284)	uts2a (ENSOSIG00000004543)	ENSOSIG00000004551	tnfrsf9a (ENSOSIG00000004560)	dvl1b (ENSOSIG00000004570)	mxra8b (ENSOSIG00000004601)	aurkaip1 (ENSOSIG00000004602)	rap1gapa (ENSOSIG00000004629)	nt5dc2 (ENSOSIG00000006355)	zgc:162200 (ENSOSIG00000008492)	apex2 (ENSOSIG00000008495)	ENSOSIG00000008513 #15	WAS (ENSOSIG00000010972) #22	sema3ga (ENSOSIG00000010988)	tspy (ENSOSIG00000014696)	ENSOSIG00000014699	wdr13 (ENSOSIG00000014704) #21	porcn (ENSOSIG00000014823) #17	PDZD4 (ENSOSIG00000014828)	kdm5c (ENSOSIG00000014863)	IQSEC2 (ENSOSIG00000017819)	ENSOSIG00000017890	ENSOSIG00000017892	gpkow (ENSOSIG00000017896)	pqbp1 (ENSOSIG00000017899) #31	ENSOSIG00000018017	sypb (ENSOSIG00000019358)	PRICKLE3 (ENSOSIG00000019360)
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Cichlidae	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Midas cichlid	MODERN SPECIES	531	ENSACIG00000009539	dnajc11a (ENSACIG00000009565)	ENSACIG00000009606	CAMTA1 (ENSACIG00000009623)	uts2a (ENSACIG00000009730)	ccdc187 (ENSACIG00000009742)	tnfrsf9a (ENSACIG00000009783)	dvl1b (ENSACIG00000009802)	mxra8b (ENSACIG00000009844)	aurkaip1 (ENSACIG00000009870)	rap1gapa (ENSACIG00000009893)	nt5dc2 (ENSACIG00000009937)	zgc:162200 (ENSACIG00000009969)	apex2 (ENSACIG00000010000)	SLC38A5 (ENSACIG00000010034) #15	WAS (ENSACIG00000010190) #22	sema3ga (ENSACIG00000010215)	tspy (ENSACIG00000010271)	ENSACIG00000010370	ENSACIG00000010375	wdr13 (ENSACIG00000010381) #21	si:ch211-255g12.6 (ENSACIG00000010400)	porcn (ENSACIG00000010418) #17	PDZD4 (ENSACIG00000010452)	kdm5c (ENSACIG00000010559)	IQSEC2 (ENSACIG00000010622)	ENSACIG00000010736	gpkow (ENSACIG00000010755)	pqbp1 (ENSACIG00000010832) #31	timm17b (ENSACIG00000010854) #30	ENSACIG00000010877
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Nile tilapia	MODERN SPECIES	12	ENSONIG00000016916	ENSONIG00000016914	fbxo44.3 (ENSONIG00000016911)	dnajc11a (ENSONIG00000016906)	uts2a (ENSONIG00000016900)	ENSONIG00000016899	tnfrsf9a (ENSONIG00000016898)	dvl1b (ENSONIG00000016892)	mxra8b (ENSONIG00000016890)	aurkaip1 (ENSONIG00000016889)	rap1gapa (ENSONIG00000016887)	nt5dc2 (ENSONIG00000016884)	zgc:162200 (ENSONIG00000016883)	apex2 (ENSONIG00000016881)	SLC38A5 (ENSONIG00000016876) #15	WAS (ENSONIG00000016875) #22	sema3ga (ENSONIG00000016871)	tspy (ENSONIG00000016867)	ENSONIG00000021139	wdr13 (ENSONIG00000016865) #21	porcn (ENSONIG00000016858) #17	PDZD4 (ENSONIG00000033066)	kdm5c (ENSONIG00000016838)	IQSEC2 (ENSONIG00000016837)	ENSONIG00000016835	gpkow (ENSONIG00000016834)	pqbp1 (ENSONIG00000030368) #31	timm17b (ENSONIG00000037655) #30	ENSONIG00000016822	syp (ENSONIG00000027188)	ENSONIG00000036333
Pomacentridae	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Spiny chromis	MODERN SPECIES	54									mxra8b (ENSAPOG00000006077)	aurkaip1 (ENSAPOG00000006066)	rap1gapa (ENSAPOG00000006024)	nt5dc2 (ENSAPOG00000005921)	zgc:162200 (ENSAPOG00000005862)	apex2 (ENSAPOG00000005805)	SLC38A5 (ENSAPOG00000005796) #15	WAS (ENSAPOG00000005777) #22	sema3ga (ENSAPOG00000005751)	tspy (ENSAPOG00000005680)	ENSAPOG00000005654	ENSAPOG00000005627	wdr13 (ENSAPOG00000005610) #21	si:ch211-255g12.6 (ENSAPOG00000005553)	porcn (ENSAPOG00000005522) #17	PDZD4 (ENSAPOG00000005424)	kdm5c (ENSAPOG00000005366)	IQSEC2 (ENSAPOG00000005173)	ENSAPOG00000004998	gpkow (ENSAPOG00000004970)	pqbp1 (ENSAPOG00000004957) #31	timm17b (ENSAPOG00000004939) #30	ENSAPOG00000000125
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00940000159408.u.b	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.C	ENSGT00940000164755.B	ENSGT00940000164755.D	ENSGT00390000015154
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00940000153675.a.a.b	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30
Tetraodontidae	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Tetraodon	MODERN SPECIES	26	emc4 (ENSTNIG00000003688)	lpcat4 (ENSTNIG00000003689)	nop10 (ENSTNIG00000000971)	SLC12A6 (ENSTNIG00000003690)	tox4b (ENSTNIG00000003691)	supt16h (ENSTNIG00000003692)	MSANTD2 (ENSTNIG00000003697)	ENSTNIG00000003698	ENSTNIG00000003716	ENSTNIG00000003717	ENSTNIG00000003718	ENSTNIG00000003720	rad23aa (ENSTNIG00000003723)	apex2 (ENSTNIG00000003725)	SLC38A5 (ENSTNIG00000003726) #15	WAS (ENSTNIG00000003727) #22	ENSTNIG00000003734	MYH9 (ENSTNIG00000003735)	ENSTNIG00000003736	CALHM3 (ENSTNIG00000003737)	hells (ENSTNIG00000003738)	ENSTNIG00000000118	ENSTNIG00000003740	ENSTNIG00000003743	si:cabz01090165.1 (ENSTNIG00000003744)	ENSTNIG00000000531	ENSTNIG00000003745	ENSTNIG00000003746	ENSTNIG00000003747	ENSTNIG00000003752	ENSTNIG00000003755
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00940000153675.a.a.b	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30	ENSGT00940000166169
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00940000159408.u.a	ENSGT00940000159408.u.b	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00940000181320	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30
Perciformes	ANCESTRAL SPECIES	4	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000165359.b	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00940000181320	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000159408.u.a	ENSGT00940000159408.u.b	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30	ENSGT00940000166169	ENSGT01030000234637.b.c.h
Pike perch	MODERN SPECIES	83	CDC42 (ENSSLUG00000022757)	fbxo44.3 (ENSSLUG00000022770)	dhfr (ENSSLUG00000022772)	dnajc11a (ENSSLUG00000022788)	uts2a (ENSSLUG00000022889)	ccdc187 (ENSSLUG00000022893)	tnfrsf9a (ENSSLUG00000022905)	dvl1b (ENSSLUG00000022938)	mxra8b (ENSSLUG00000023002)	aurkaip1 (ENSSLUG00000001478)	rap1gapa (ENSSLUG00000001852)	nt5dc2 (ENSSLUG00000002660)	zgc:162200 (ENSSLUG00000003126)	apex2 (ENSSLUG00000003261)	SLC38A5 (ENSSLUG00000003521) #15	ENSSLUG00000005590 #22	sema3ga (ENSSLUG00000005727)	tspy (ENSSLUG00000007675)	ENSSLUG00000007685	wdr13 (ENSSLUG00000007700) #21	porcn (ENSSLUG00000007785) #17	PDZD4 (ENSSLUG00000007816)	kdm5c (ENSSLUG00000008168)	IQSEC2 (ENSSLUG00000015259)	ENSSLUG00000015291	ENSSLUG00000015296	gpkow (ENSSLUG00000015311)	pqbp1 (ENSSLUG00000015333) #31	timm17b (ENSSLUG00000015357) #30	ENSSLUG00000015369	sypb (ENSSLUG00000015386)
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00860000133842.n	ENSGT00940000165359.b	ENSGT00940000155203.a	ENSGT01010000230163	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00940000181320	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30
Stickleback	MODERN SPECIES	11	ENSGACG00000012439	ENSGACG00000012433	ENSGACG00000012425	dnajc11a (ENSGACG00000012391)	ENSGACG00000012384	uts2a (ENSGACG00000012378)	ccdc187 (ENSGACG00000012372)	dvl1b (ENSGACG00000012365)	mxra8b (ENSGACG00000012362)	aurkaip1 (ENSGACG00000012359)	rap1gapa (ENSGACG00000012353)	nt5dc2 (ENSGACG00000012314)	zgc:162200 (ENSGACG00000012309)	apex2 (ENSGACG00000012307)	SLC38A5 (ENSGACG00000012263) #15	WAS (ENSGACG00000012237) #22	sema3ga (ENSGACG00000012228)	tspy (ENSGACG00000012214)	ENSGACG00000012210	ENSGACG00000012208	wdr13 (ENSGACG00000012202) #21	si:ch211-255g12.6 (ENSGACG00000012198)	porcn (ENSGACG00000012184) #17	ENSGACG00000012179	PDZD4 (ENSGACG00000012172)	ENSGACG00000012170	kdm5c (ENSGACG00000012163)	IQSEC2 (ENSGACG00000012157)	ENSGACG00000012146	gpkow (ENSGACG00000012127)	pqbp1 (ENSGACG00000012123) #31
Eupecaria_C	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Gilthead seabream	MODERN SPECIES	21	mapkapk2b (ENSSAUG00010019349)	FMOD (ENSSAUG00010019342)	csf1b (ENSSAUG00010019341)	ren (ENSSAUG00010019322)	MAGI1 (ENSSAUG00010018307)	rho (ENSSAUG00010018292)	prickle2a (ENSSAUG00010018288)	ENSSAUG00010018286	QRICH1 (ENSSAUG00010018281)	qars1 (ENSSAUG00010016081)	ogg1 (ENSSAUG00010016056)	ENSSAUG00010016055	zgc:162200 (ENSSAUG00010016049)	apex2 (ENSSAUG00010016046)	SLC38A5 (ENSSAUG00010015749) #15	WAS (ENSSAUG00010015723) #22	sema3ga (ENSSAUG00010014522)	tspy (ENSSAUG00010014505)	ENSSAUG00010014504	wdr13 (ENSSAUG00010014496) #21	porcn (ENSSAUG00010014451) #17	PDZD4 (ENSSAUG00010014439)	kdm5c (ENSSAUG00010013400)	IQSEC2 (ENSSAUG00010013364)	IQSEC2 (ENSSAUG00010013380)	ENSSAUG00010013356	gpkow (ENSSAUG00010013349)	pqbp1 (ENSSAUG00010013347) #31	timm17b (ENSSAUG00010013345) #30	ENSSAUG00010013064	sypb (ENSSAUG00010013046)
Ballan wrasse	MODERN SPECIES	4	ENSLBEG00000011042	fbxo44.3 (ENSLBEG00000011094)	dnajc11a (ENSLBEG00000011155)	CAMTA1 (ENSLBEG00000011296)	uts2a (ENSLBEG00000011403)	ccdc187 (ENSLBEG00000011439)	tnfrsf9a (ENSLBEG00000011509)	dvl1b (ENSLBEG00000011552)	mxra8b (ENSLBEG00000011625)	aurkaip1 (ENSLBEG00000011649)	rap1gapa (ENSLBEG00000011749)	nt5dc2 (ENSLBEG00000012012)	zgc:162200 (ENSLBEG00000012086)	apex2 (ENSLBEG00000012139)	SLC38A5 (ENSLBEG00000012169) #15	WAS (ENSLBEG00000012225) #22	sema3ga (ENSLBEG00000012273)	tspy (ENSLBEG00000012359)	ENSLBEG00000012391	ENSLBEG00000012404	wdr13 (ENSLBEG00000012421) #21	si:ch211-255g12.6 (ENSLBEG00000012456)	porcn (ENSLBEG00000012498) #17	PDZD4 (ENSLBEG00000012588)	kdm5c (ENSLBEG00000012712)	IQSEC2 (ENSLBEG00000012945)	ENSLBEG00000013190	gpkow (ENSLBEG00000013238)	pqbp1 (ENSLBEG00000013265) #31	timm17b (ENSLBEG00000013294) #30	ENSLBEG00000013344
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00940000153675.a.a.a.b	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00940000164755.C	ENSGT00940000164755.B	ENSGT00390000015154
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00940000153675.a.b.b	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00940000164755.C	ENSGT00940000164755.B	ENSGT00390000015154	ENSGT00950000183102.C #31
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000024206	ENSMAMG00000024207	dnajc11a (ENSMAMG00000024208)	ENSMAMG00000024210	uts2a (ENSMAMG00000024211)	ENSMAMG00000024212	tnfrsf9a (ENSMAMG00000024213)	DVL1 (ENSMAMG00000024214)	mxra8b (ENSMAMG00000024215)	aurkaip1 (ENSMAMG00000024216)	ENSMAMG00000024217	ENSMAMG00000024218	ENSMAMG00000024219	ENSMAMG00000024220	ENSMAMG00000024221 #15	ENSMAMG00000024222 #22	sema3ga (ENSMAMG00000024223)	tspy (ENSMAMG00000024224)	ENSMAMG00000025736	ENSMAMG00000024227 #21	ENSMAMG00000024229 #17	ENSMAMG00000028426	ENSMAMG00000024231	kdm5c (ENSMAMG00000024232)	ENSMAMG00000024233	gpkow (ENSMAMG00000024235)	pqbp1 (ENSMAMG00000024236) #31	ENSMAMG00000024237 #30	ENSMAMG00000024239	sypb (ENSMAMG00000024241)	plp2b (ENSMAMG00000024242)
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00940000153675.a.b.b	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00940000164755.C	ENSGT00940000164755.B	ENSGT00390000015154	ENSGT00950000183102.C #31
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000013974	ENSBSLG00000013983	fbxo44.3 (ENSBSLG00000014001)	dnajc11a (ENSBSLG00000014019)	uts2a (ENSBSLG00000014775)	ENSBSLG00000014786	tnfrsf9a (ENSBSLG00000014808)	dvl1b (ENSBSLG00000014833)	mxra8b (ENSBSLG00000015070)	aurkaip1 (ENSBSLG00000015074)	rap1gapa (ENSBSLG00000015120)	nt5dc2 (ENSBSLG00000017746)	zgc:162200 (ENSBSLG00000018155)	apex2 (ENSBSLG00000018221)	SLC38A5 (ENSBSLG00000018262) #15	WAS (ENSBSLG00000018616) #22	sema3ga (ENSBSLG00000018634)	tspy (ENSBSLG00000019401)	ENSBSLG00000019425	ENSBSLG00000019437	wdr13 (ENSBSLG00000019455) #21	porcn (ENSBSLG00000019551) #17	PDZD4 (ENSBSLG00000019769)	kdm5c (ENSBSLG00000019835)	IQSEC2 (ENSBSLG00000020070)	ENSBSLG00000020996	ENSBSLG00000021105	gpkow (ENSBSLG00000021123)	pqbp1 (ENSBSLG00000021150) #31	timm17b (ENSBSLG00000021160) #30	sypb (ENSBSLG00000021453)
Carangaria	ANCESTRAL SPECIES	2	ENSGT00940000153675.a.a.a.b	ENSGT00940000159408.u.a	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30	ENSGT00940000166169
Carangaria_A	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Seriola	ANCESTRAL SPECIES	25	ENSGT00950000182977.A.i.a.d	ENSGT00940000159408.u.a	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00390000011058.a	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30	ENSGT00940000166169
Greater amberjack	MODERN SPECIES	145	CDC42 (ENSSDUG00000022753)	fbxo44.3 (ENSSDUG00000022760)	dnajc11a (ENSSDUG00000022768)	CAMTA1 (ENSSDUG00000022781)	uts2a (ENSSDUG00000022794)	ccdc187 (ENSSDUG00000022801)	tnfrsf9a (ENSSDUG00000022808)	dvl1b (ENSSDUG00000022814)	mxra8b (ENSSDUG00000022829)	aurkaip1 (ENSSDUG00000022835)	rap1gapa (ENSSDUG00000022842)	nt5dc2 (ENSSDUG00000022874)	zgc:162200 (ENSSDUG00000022884)	apex2 (ENSSDUG00000022892)	SLC38A5 (ENSSDUG00000022896) #15	WAS (ENSSDUG00000022908) #22	sema3ga (ENSSDUG00000022918)	tspy (ENSSDUG00000022970)	ENSSDUG00000022972	ENSSDUG00000022973	wdr13 (ENSSDUG00000022978) #21	si:ch211-255g12.6 (ENSSDUG00000022988)	porcn (ENSSDUG00000022990) #17	PDZD4 (ENSSDUG00000022998)	kdm5c (ENSSDUG00000023016)	IQSEC2 (ENSSDUG00000023073)	ENSSDUG00000023130	gpkow (ENSSDUG00000023134)	pqbp1 (ENSSDUG00000023139) #31	timm17b (ENSSDUG00000023143) #30	ENSSDUG00000023145
Pleuronectoidei	ANCESTRAL SPECIES	24	ENSGT00940000153675.a.a.a.b	ENSGT00940000159408.v	ENSGT00860000133842.n	ENSGT00940000155203.a	ENSGT00510000049583	ENSGT00940000181663	ENSGT00940000166327	ENSGT00950000182903.b.a.z	ENSGT00390000001509.b	ENSGT00390000012802	ENSGT00940000156138.c	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00950000183062.a.b.b.a	ENSGT00940000164196.d	ENSGT00940000159667.b	ENSGT00940000164755.D	ENSGT00390000015154	ENSGT00950000183102.C #31	ENSGT00390000017780.e #30	ENSGT00940000166169
Tongue sole	MODERN SPECIES	1	fbxo44.3 (ENSCSEG00000019475)	dnajc11a (ENSCSEG00000019480)	ENSCSEG00000019494	ENSCSEG00000019498	uts2a (ENSCSEG00000019502)	ENSCSEG00000019517	tnfrsf9a (ENSCSEG00000019519)	dvl1b (ENSCSEG00000019526)	mxra8b (ENSCSEG00000019547)	aurkaip1 (ENSCSEG00000019801)	rap1gapa (ENSCSEG00000019809)	nt5dc2 (ENSCSEG00000019886)	zgc:162200 (ENSCSEG00000019892)	apex2 (ENSCSEG00000019900)	SLC38A5 (ENSCSEG00000019903) #15	WAS (ENSCSEG00000019910) #22	sema3ga (ENSCSEG00000019964)	tspy (ENSCSEG00000019977)	ENSCSEG00000019986	ENSCSEG00000019990	wdr13 (ENSCSEG00000019991) #21	si:ch211-255g12.6 (ENSCSEG00000020016)	porcn (ENSCSEG00000020020) #17	PDZD4 (ENSCSEG00000020029)	kdm5c (ENSCSEG00000020038)	IQSEC2 (ENSCSEG00000020080)	ENSCSEG00000020567	gpkow (ENSCSEG00000020569)	pqbp1 (ENSCSEG00000020573) #31	timm17b (ENSCSEG00000020576) #30	ENSCSEG00000020579
Turbot	MODERN SPECIES	2	ENSSMAG00000012064	dnajc11a (ENSSMAG00000012070)	ENSSMAG00000012153	uts2a (ENSSMAG00000012331)	ENSSMAG00000012355	tnfrsf9a (ENSSMAG00000012478)	DVL1 (ENSSMAG00000012499)	mxra8b (ENSSMAG00000012535)	aurkaip1 (ENSSMAG00000012542)	ENSSMAG00000012551	ENSSMAG00000012680	ENSSMAG00000012708	ENSSMAG00000025548	ENSSMAG00000012753	ENSSMAG00000012778 #15	ENSSMAG00000012879 #22	sema3ga (ENSSMAG00000012905)	tspy (ENSSMAG00000012931)	ENSSMAG00000012951	ENSSMAG00000012952	ENSSMAG00000012960 #21	ENSSMAG00000013020 #17	ENSSMAG00000032329	kdm5c (ENSSMAG00000013114)	ENSSMAG00000013159	ENSSMAG00000034672	ENSSMAG00000013280	ENSSMAG00000034498	gpkow (ENSSMAG00000013323)	pqbp1 (ENSSMAG00000013340) #31	ENSSMAG00000013357 #30
Cod	MODERN SPECIES		ENSGMOG00000019693	ENSGMOG00000019692	dnajc11a (ENSGMOG00000019691)	ENSGMOG00000034652	uts2a (ENSGMOG00000019689)	ENSGMOG00000019688	tnfrsf9a (ENSGMOG00000022486)	DVL1 (ENSGMOG00000019687)	mxra8b (ENSGMOG00000019686)	aurkaip1 (ENSGMOG00000019685)	ENSGMOG00000033289	ENSGMOG00000019683	ENSGMOG00000019682	ENSGMOG00000019681	ENSGMOG00000019680 #15	ENSGMOG00000019679 #22	sema3ga (ENSGMOG00000019678)	tspy (ENSGMOG00000031414)	ENSGMOG00000026186	ENSGMOG00000019675	ENSGMOG00000019674 #21	ENSGMOG00000019671	ENSGMOG00000019672 #17	ENSGMOG00000030983	kdm5c (ENSGMOG00000019666)	ENSGMOG00000019665	ENSGMOG00000031241	gpkow (ENSGMOG00000019661)	pqbp1 (ENSGMOG00000019660) #31	ENSGMOG00000019658 #30	ENSGMOG00000019651
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00730000110895.b.b #22
Oncorhynchus	ANCESTRAL SPECIES	7	ENSGT00940000153675.a.a.a.b.c.a	ENSGT00940000159408.r	ENSGT00940000162344	ENSGT00860000133842.n.c	ENSGT00940000155203.a.f	ENSGT00510000049583.k.b	ENSGT00390000011058.a.a	ENSGT00940000166327.f	ENSGT00950000182903.b.a.z.e.a	ENSGT00390000001509.b.c	ENSGT00390000012802	ENSGT00940000156138.c.c	ENSGT00940000164911.e.a	ENSGT00940000154471.a.a.d	ENSGT00940000161233.b #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b.c	ENSGT00940000166378.a	ENSGT00890000139436.A.b.b.a	ENSGT00940000160063.g.b.d #23	ENSGT00940000153634.a.h #21	ENSGT01030000234564.a.a.b.a.f.b #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a.b	ENSGT00940000164196.d.c.a	ENSGT00940000159667.b.c	ENSGT00940000164755.B	ENSGT00390000015154.d	ENSGT00950000183102.C.a #31	ENSGT00390000017780.e.y #30	ENSGT00390000008631.b.e
Oncorhynchus_a	ANCESTRAL SPECIES	9	ENSGT00940000153675.a.a.a.b.c.a	ENSGT00940000159408.r	ENSGT00940000162344	ENSGT00860000133842.n.c	ENSGT00940000155203.a.f	ENSGT00510000049583.k.b	ENSGT00390000011058.a.a	ENSGT00940000166327.f	ENSGT00950000182903.b.a.z.e.a	ENSGT00390000001509.b.c	ENSGT00390000012802	ENSGT00940000156138.c.c	ENSGT00940000164911.e.a	ENSGT00940000154471.a.a.d	ENSGT00940000161233.b.a #15	ENSGT00730000110895.b.b #22	ENSGT00940000165056.b.c	ENSGT00940000166378.a	ENSGT00890000139436.A.b.b.a	ENSGT00940000160063.g.b.d #23	ENSGT00940000153634.a.h #21	ENSGT01030000234564.a.a.b.a.f.b #17	ENSGT00990000211391	ENSGT00950000183062.a.b.b.a.b	ENSGT00940000164196.d.c.a	ENSGT00940000159667.b.c	ENSGT00940000164755.B	ENSGT00390000015154.d	ENSGT00950000183102.C.a #31	ENSGT00390000017780.e.y #30	ENSGT00390000008631.b.e
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	14	CDC42 (ENSOTSG00005037186)	ENSOTSG00005037149	THAP3 (ENSOTSG00005037145)	dnajc11a (ENSOTSG00005037101)	ENSOTSG00005037100	uts2a (ENSOTSG00005037081)	ENSOTSG00005037080	tnfrsf9a (ENSOTSG00005037079)	DVL1 (ENSOTSG00005037074)	mxra8b (ENSOTSG00005037073)	aurkaip1 (ENSOTSG00005037071)	rap1gapa (ENSOTSG00005036678)	ENSOTSG00005036263	zgc:162200 (ENSOTSG00005036260)	ENSOTSG00005036112 #15	WAS (ENSOTSG00005036108) #22	sema3ga (ENSOTSG00005035763)	tspy (ENSOTSG00005035761)	ENSOTSG00005035760	suv39h1b (ENSOTSG00005035758) #23	wdr13 (ENSOTSG00005035755) #21	porcn (ENSOTSG00005035751) #17	ENSOTSG00005035750	PDZD4 (ENSOTSG00005035749)	kdm5c (ENSOTSG00005035204)	IQSEC2 (ENSOTSG00005035200)	ENSOTSG00005035198	gpkow (ENSOTSG00005035197)	pqbp1 (ENSOTSG00005035194) #31	timm17b (ENSOTSG00005035191) #30	praf2 (ENSOTSG00005035189)
Chinook salmon	MODERN SPECIES	2955	ENSOTSG00005033021	ENSOTSG00005033023	ENSOTSG00005033024	ENSOTSG00005033025	ENSOTSG00005033026	uts2a (ENSOTSG00005033028)	ENSOTSG00005033030	tnfrsf9a (ENSOTSG00005033032)	DVL1 (ENSOTSG00005033033)	mxra8b (ENSOTSG00005033034)	aurkaip1 (ENSOTSG00005033035)	rap1gapa (ENSOTSG00005033036)	ENSOTSG00005033073	zgc:162200 (ENSOTSG00005033421)	SLC38A5 (ENSOTSG00005033424) #15	WAS (ENSOTSG00005033699) #22	sema3ga (ENSOTSG00005033706)	tspy (ENSOTSG00005034745)	ENSOTSG00005034747	wdr13 (ENSOTSG00005034748) #21	porcn (ENSOTSG00005034922) #17	PDZD4 (ENSOTSG00005034940)	kdm5c (ENSOTSG00005034987)	IQSEC2 (ENSOTSG00005035165)	ENSOTSG00005035167	gpkow (ENSOTSG00005035168)	pqbp1 (ENSOTSG00005035169) #31	timm17b (ENSOTSG00005035170) #30	praf2 (ENSOTSG00005035171)
Coho salmon	MODERN SPECIES	8	ENSOKIG00005043352	dnajc11a (ENSOKIG00005043362)	CAMTA1 (ENSOKIG00005043430)	ENSOKIG00005043562	uts2a (ENSOKIG00005004278)	ENSOKIG00005004336	tnfrsf9a (ENSOKIG00005004394)	DVL1 (ENSOKIG00005004436)	mxra8b (ENSOKIG00005004467)	ENSOKIG00005004493	RAP1GAP (ENSOKIG00005004697)	ENSOKIG00005006254	zgc:162200 (ENSOKIG00005006308)	apex2 (ENSOKIG00005006331)	ENSOKIG00005006360 #15	WAS (ENSOKIG00005006523) #22	sema3ga (ENSOKIG00005006715)	tspy (ENSOKIG00005009194)	ENSOKIG00005009212	ENSOKIG00005009220	suv39h1b (ENSOKIG00005009233) #23	WDR13 (ENSOKIG00005009272) #21	PORCN (ENSOKIG00005009370) #17	PDZD4 (ENSOKIG00005009420)	kdm5c (ENSOKIG00005009474)	IQSEC2 (ENSOKIG00005009608)	gpkow (ENSOKIG00005009642)	pqbp1 (ENSOKIG00005009696) #31	timm17b (ENSOKIG00005009734) #30	PRAF2 (ENSOKIG00005009746)	ENSOKIG00005009818
Northern pike	MODERN SPECIES	11	dnajc11a (ENSELUG00000020680)	ENSELUG00000026270	CAMTA1 (ENSELUG00000020819)	uts2a (ENSELUG00000020866)	ENSELUG00000020944	tnfrsf9a (ENSELUG00000020962)	dvl1b (ENSELUG00000021053)	mxra8b (ENSELUG00000021093)	aurkaip1 (ENSELUG00000021118)	rap1gapa (ENSELUG00000021235)	ENSELUG00000021314	zgc:162200 (ENSELUG00000021400)	apex2 (ENSELUG00000021417)	SLC38A5 (ENSELUG00000021464) #15	ENSELUG00000026688	WAS (ENSELUG00000021483) #22	sema3ga (ENSELUG00000021552)	tspy (ENSELUG00000021580)	ENSELUG00000021593	ENSELUG00000021597	suv39h1b (ENSELUG00000021619) #23	wdr13 (ENSELUG00000021692) #21	porcn (ENSELUG00000021803) #17	PDZD4 (ENSELUG00000021896)	kdm5c (ENSELUG00000022025)	IQSEC2 (ENSELUG00000022188)	ENSELUG00000026234	ENSELUG00000032149	gpkow (ENSELUG00000022223)	pqbp1 (ENSELUG00000022215) #31	timm17b (ENSELUG00000001072) #30
Otomorpha	DUPLICATION
Otomorpha	ANCESTRAL SPECIES	83														ENSGT00390000003809	ENSGT00940000166636	ENSGT00730000110895.b.b.c #22	ENSGT00940000165056.a	ENSGT00940000165955.a	ENSGT00890000139436.A.b.a	ENSGT00940000160063.g.a #23	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a.e #17	ENSGT00950000183062.a.b.b.b	ENSGT00940000159667.a	ENSGT00940000164755.A	ENSGT00940000159855	ENSGT01030000234637.b.c.g	ENSGT00990000203541.b	ENSGT00940000159563 #27	ENSGT00940000166313.b	ENSGT00940000159128
Otophysi	ANCESTRAL SPECIES	205														ENSGT00390000003809	ENSGT00940000166636	ENSGT00730000110895.b.b.c #22	ENSGT00940000165056.a	ENSGT00940000165955.a	ENSGT00890000139436.A.b.a	ENSGT00940000160063.g.a #23	ENSGT00940000166825	ENSGT00980000199713	ENSGT00490000043329.a.a.a.vb.b	ENSGT00940000166425	ENSGT00940000165632	ENSGT00390000009113.d	ENSGT00940000155572.a.b	ENSGT00980000199610	ENSGT00940000155597.u.a	ENSGT00940000158186.h	ENSGT00390000015162.c
Characiphysae	ANCESTRAL SPECIES	43														ENSGT00390000003809	ENSGT00940000166636	ENSGT00730000110895.b.b.c #22	ENSGT00940000165056.a	ENSGT00940000165955.a	ENSGT00890000139436.A.b.a	ENSGT00940000160063.g.a #23	ENSGT00940000166825	ENSGT00980000199713	ENSGT00490000043329.a.a.a.vb.b	ENSGT00940000166425	ENSGT00940000165632	ENSGT00940000161218	ENSGT00390000009113.d	ENSGT00940000155572.a.b	ENSGT00980000199610	ENSGT00940000155597.u.a	ENSGT00940000158186.h
Channel catfish	MODERN SPECIES	24	srpk1a (ENSIPUG00000000830)	MAPK14 (ENSIPUG00000000798)	kiaa1324 (ENSIPUG00000000782)	c5h1orf194 (ENSIPUG00000000768)	ENSIPUG00000000762	rpl10a (ENSIPUG00000000731)	fance (ENSIPUG00000000720)	mkrn4 (ENSIPUG00000000711)	ppard (ENSIPUG00000000702)	cfp (ENSIPUG00000000699)	tbc1d25 (ENSIPUG00000000683) #19	nt5dc2 (ENSIPUG00000000667)	ccdc22 (ENSIPUG00000000650)	ENSIPUG00000000644	SLC38A3 (ENSIPUG00000000602)	WAS (ENSIPUG00000000568) #22	sema3gb (ENSIPUG00000000541)	foxp3 (ENSIPUG00000000533)	gpr173 (ENSIPUG00000000531)	suv39h1a (ENSIPUG00000000530) #23	ENSIPUG00000000523	ENSIPUG00000000522	ENSIPUG00000000518	mapre1a (ENSIPUG00000000511)	dnmt3ba (ENSIPUG00000000469)	ENSIPUG00000000456	ppdpfa (ENSIPUG00000000453)	tpd52l2 (ENSIPUG00000000440)	csp (ENSIPUG00000000434)	gid8a (ENSIPUG00000000429)	ENSIPUG00000000427
Characiphysae_b	ANCESTRAL SPECIES	42														ENSGT00390000003809	ENSGT00940000166636	ENSGT00730000110895.b.b.c #22	ENSGT00940000165056.a	ENSGT00940000165955.a	ENSGT00890000139436.A.b.a	ENSGT00940000160063.g.a #23	ENSGT00940000166825	ENSGT00980000199713	ENSGT00490000043329.a.a.a.vb.b	ENSGT00940000166425	ENSGT00940000165632	ENSGT00390000009113.d	ENSGT00940000155572.a.b	ENSGT00980000199610	ENSGT00940000155597.u.a	ENSGT00940000158186.h	ENSGT00390000015162.c
Electric eel	MODERN SPECIES	191	ogfod1 (ENSEEEG00000016581)	fbxl8 (ENSEEEG00000016579)	tradd (ENSEEEG00000016578)	gnao1b (ENSEEEG00000016567)	mtbl (ENSEEEG00000016564)	tmppe (ENSEEEG00000016563)	exosc6 (ENSEEEG00000016561)	SLC38A8 (ENSEEEG00000016558)	aph1b (ENSEEEG00000016557)	HERC1 (ENSEEEG00000016423)	dapk2a (ENSEEEG00000016415)	ENSEEEG00000016414	cacna1fb (ENSEEEG00000016331)	sypa (ENSEEEG00000016328)	ENSEEEG00000016326	wasb (ENSEEEG00000016324) #22	sema3gb (ENSEEEG00000016309)	ENSEEEG00000016307	gpr173 (ENSEEEG00000016306)	suv39h1a (ENSEEEG00000016305) #23	ENSEEEG00000016304	mapre1a (ENSEEEG00000016303)	dnmt3ba (ENSEEEG00000016125)	ENSEEEG00000016120	ppdpfa (ENSEEEG00000016118)	tpd52l2a (ENSEEEG00000016116)	ENSEEEG00000016114	dnajc5aa (ENSEEEG00000016112)	gid8a (ENSEEEG00000016105)	ythdf1 (ENSEEEG00000016103)	nkain5 (ENSEEEG00000016086)
Characoidei	ANCESTRAL SPECIES	237														ENSGT00390000003809	ENSGT00940000166636	ENSGT00730000110895.b.b.c #22	ENSGT00940000165056.a	ENSGT00940000165955.a	ENSGT00890000139436.A.b.a	ENSGT00940000160063.g.a #23	ENSGT00940000166825	ENSGT00980000199713	ENSGT00490000043329.a.a.a.vb.b	ENSGT00940000166425	ENSGT00940000165632	ENSGT00390000009113.d	ENSGT00940000155572.a.b	ENSGT00980000199610	ENSGT00940000155597.u.a	ENSGT00940000158186.h	ENSGT00390000015162.c
Mexicana tetra	MODERN SPECIES	21	ELAPOR1 (ENSAMXG00000007684)	si:ch211-163l21.7 (ENSAMXG00000036004)	zgc:195245 (ENSAMXG00000007681)	ENSAMXG00000007680	ENSAMXG00000007679	rpl10a (ENSAMXG00000032692)	fance (ENSAMXG00000007675)	mkrn4 (ENSAMXG00000007674)	ppardb (ENSAMXG00000041846)	ENSAMXG00000042885	cfp (ENSAMXG00000007669)	tbc1d25 (ENSAMXG00000033614) #19	nt5dc2 (ENSAMXG00000031562)	ccdc22 (ENSAMXG00000007656)	slc38a5b (ENSAMXG00000007651)	wasb (ENSAMXG00000007647) #22	sema3gb (ENSAMXG00000007641)	ENSAMXG00000007635	gpr173 (ENSAMXG00000025164)	suv39h1a (ENSAMXG00000031011) #23	ENSAMXG00000041265	mapre1a (ENSAMXG00000039425)	dnmt3ba (ENSAMXG00000007591)	ENSAMXG00000007583	PTK6 (ENSAMXG00000038820)	ppdpfa (ENSAMXG00000007577)	tpd52l2a (ENSAMXG00000035353)	ENSAMXG00000038876	dnajc5aa (ENSAMXG00000036203)	uckl1a (ENSAMXG00000007505)	samd10a (ENSAMXG00000040883)
Cyprinoidei	ANCESTRAL SPECIES	7	ENSGT00940000166975	ENSGT00940000155325.a.a.b	ENSGT00940000156861	ENSGT01030000234625.A	ENSGT00390000011228.a.a	ENSGT00940000154102.a.g	ENSGT00390000008767	ENSGT00390000000705	ENSGT00950000183077.b	ENSGT00940000156676.d	ENSGT00940000161209	ENSGT00940000159173 #19	ENSGT00940000164911	ENSGT00390000003809	ENSGT00940000166636	ENSGT00730000110895.b.b.c #22	ENSGT00940000165056.a	ENSGT00940000165955.a	ENSGT00890000139436.A.b.a	ENSGT00940000160063.g.a #23	ENSGT00940000166825	ENSGT00980000199713	ENSGT00490000043329.a.a.a.vb.b	ENSGT00940000166425	ENSGT00940000165632	ENSGT00390000009113.d	ENSGT00940000155572.a.b	ENSGT00940000155597.u.a	ENSGT00940000158186.h	ENSGT00390000015162.c	ENSGT00940000162992.h
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	37	ENSGT00940000166975.h	ENSGT00940000155325.a.a.b.b	ENSGT00940000156861.b	ENSGT01030000234625.A.c.b	ENSGT00390000011228.a.a.a	ENSGT00940000154102.a.g.a.b	ENSGT00390000008767.q	ENSGT00390000000705.b	ENSGT00950000183077.b.a	ENSGT00940000156676.d.b	ENSGT00940000161209.c	ENSGT00940000159173.f #19	ENSGT00940000164911.j	ENSGT00390000003809.e	ENSGT00940000166636.d	ENSGT00730000110895.b.b.c.a #22	ENSGT00940000165056.a.a	ENSGT00940000165955.a.a	ENSGT00890000139436.A.b.a.b	ENSGT00490000043329.a.a.a.vb.b.b	ENSGT00940000166425.a	ENSGT00940000165632.a	ENSGT00940000161218.i.a	ENSGT00390000009113.d.c	ENSGT00940000155572.a.b.a	ENSGT00940000155597.u.a.b	ENSGT00940000158186.h.a	ENSGT00390000015162.c.a	ENSGT00940000156911.i.a	ENSGT00940000157989.a.a.a	ENSGT00940000168127.a.a.b
Goldfish	MODERN SPECIES	873	lhfpl5b (ENSCARG00000067237)	srpk1a (ENSCARG00000066292)	mapk14a (ENSCARG00000066190)	ELAPOR1 (ENSCARG00000066029)	si:ch211-163l21.7 (ENSCARG00000066008)	zgc:195245 (ENSCARG00000065994)	ENSCARG00000065988	rpl10a (ENSCARG00000065941)	mkrn4 (ENSCARG00000065925)	ppardb (ENSCARG00000065852)	ENSCARG00000065790	tbc1d25 (ENSCARG00000065776) #19	nt5dc2 (ENSCARG00000065692)	ccdc22 (ENSCARG00000065617)	slc38a5b (ENSCARG00000065580)	wasb (ENSCARG00000065567) #22	sema3gb (ENSCARG00000065529)	ENSCARG00000065517	gpr173 (ENSCARG00000065512)	mapre1a (ENSCARG00000065487)	dnmt3ba (ENSCARG00000065289)	ENSCARG00000065251	PTK6 (ENSCARG00000065241)	ppdpfa (ENSCARG00000065234)	tpd52l2a (ENSCARG00000065221)	dnajc5aa (ENSCARG00000065180)	gid8a (ENSCARG00000065166)	ythdf1 (ENSCARG00000065145)	nkain5 (ENSCARG00000065137)	si:dkey-70p6.1 (ENSCARG00000065130)	samd10a (ENSCARG00000065114)
Cyprininae_a	ANCESTRAL SPECIES	39	ENSGT00990000203541.a.a.b.g.d	ENSGT00940000166975.h	ENSGT00940000155325.a.a.b.b	ENSGT00940000156861.b	ENSGT00390000011228.a.a.a	ENSGT00940000154102.a.g.a.b	ENSGT00390000008767.q	ENSGT00390000000705.b	ENSGT00950000183077.b.a	ENSGT00940000156676.d.b	ENSGT00940000161209.c	ENSGT00940000159173.f #19	ENSGT00940000164911.j	ENSGT00390000003809.e	ENSGT00940000166636.d	ENSGT00730000110895.b.b.c.a #22	ENSGT00940000165056.a.a	ENSGT00940000165955.a.a	ENSGT00890000139436.A.b.a.b	ENSGT00490000043329.a.a.a.vb.b.b	ENSGT00940000166425.a	ENSGT00940000165632.a	ENSGT00940000161218.i.a	ENSGT00390000009113.d.c	ENSGT00940000155572.a.b.a	ENSGT00940000155597.u.a.b	ENSGT00940000158186.h.a	ENSGT00390000015162.c.a	ENSGT00940000156911.i.a	ENSGT00940000157989.a.a.b.a	ENSGT00940000168127.a.a.a
Common carp reference	MODERN SPECIES	17	cpne5a (ENSCCRG00000010993)	lhfpl5b (ENSCCRG00000001353)	srpk1a (ENSCCRG00000050970)	ENSCCRG00000050911	ENSCCRG00000056041	ENSCCRG00000050235	ENSCCRG00000050980	rpl10a (ENSCCRG00000057255)	mkrn4 (ENSCCRG00000050163)	ppardb (ENSCCRG00000050977)	ENSCCRG00000050094	tbc1d25 (ENSCCRG00000050086) #19	nt5dc2 (ENSCCRG00000050032)	ccdc22 (ENSCCRG00000002130)	slc38a5b (ENSCCRG00000002161)	wasb (ENSCCRG00000005377) #22	sema3gb (ENSCCRG00000014199)	ENSCCRG00000014166	gpr173 (ENSCCRG00000082903)	suv39h1a (ENSCCRG00000014181) #23	ENSCCRG00000041189	mapre1a (ENSCCRG00000008742)	dnmt3ba (ENSCCRG00000008779)	ENSCCRG00000000695	ENSCCRG00000054955	tpd52l2a (ENSCCRG00000013991)	dnajc5aa (ENSCCRG00000076837)	ENSCCRG00000014028	gid8a (ENSCCRG00000014036)	ENSCCRG00000070277	ythdf1 (ENSCCRG00000014046)
Golden-line barbel	MODERN SPECIES	15													nt5dc2 (ENSSGRG00000032090)	ccdc22 (ENSSGRG00000031755)	slc38a5b (ENSSGRG00000031740)	wasb (ENSSGRG00000031737) #22	sema3gb (ENSSGRG00000031654)	ENSSGRG00000031649	gpr173 (ENSSGRG00000031648)	mapre1a (ENSSGRG00000031647)	dnmt3ba (ENSSGRG00000030373)	ENSSGRG00000030347	PTK6 (ENSSGRG00000030346)	ppdpfa (ENSSGRG00000030343)	tpd52l2a (ENSSGRG00000030342)	dnajc5aa (ENSSGRG00000030338)	ENSSGRG00000030337	gid8a (ENSSGRG00000030335)	ythdf1 (ENSSGRG00000030333)	nkain5 (ENSSGRG00000030330)	ENSSGRG00000030328
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00940000155325.a.a.b.a	ENSGT00940000154427.A.e	ENSGT00940000156861.a	ENSGT01030000234625.A.c.a	ENSGT00390000011228.a.a.b	ENSGT00940000154102.a.g.a.a	ENSGT00390000008767.r	ENSGT00390000000705.a	ENSGT00950000183077.b.b	ENSGT00940000156676.d.a	ENSGT00940000161209.d	ENSGT00940000159173.e #19	ENSGT00940000164911.i	ENSGT00390000003809.f	ENSGT00940000166636.c	ENSGT00730000110895.b.b.c.b #22	ENSGT00940000165056.a.b	ENSGT00940000165955.a.b	ENSGT00890000139436.A.b.a.a	ENSGT00940000160063.g.a #23	ENSGT00940000166825	ENSGT00980000199713	ENSGT00490000043329.a.a.a.vb.b.a	ENSGT00940000166425.b	ENSGT00940000165632.b	ENSGT00940000161218.i.b	ENSGT00390000009113.d.d	ENSGT00940000155572.a.b.b	ENSGT00940000155597.u.a.a	ENSGT00940000158186.h.b	ENSGT00390000015162.c.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2352														ccdc22 (ENSCARG00000040199)	slc38a5b (ENSCARG00000040065)	wasb (ENSCARG00000039996) #22
Goldfish	MODERN SPECIES	48	srpk1a (ENSCARG00000005839)	ENSCARG00000006124	ELAPOR1 (ENSCARG00000006626)	si:ch211-163l21.7 (ENSCARG00000006842)	zgc:195245 (ENSCARG00000006850)	ENSCARG00000006865	rpl10a (ENSCARG00000006880)	fance (ENSCARG00000006949)	mkrn4 (ENSCARG00000006980)	ppardb (ENSCARG00000007004)	ENSCARG00000007044	tbc1d25 (ENSCARG00000007058) #19	nt5dc2 (ENSCARG00000007099)	ccdc22 (ENSCARG00000007317)	slc38a5b (ENSCARG00000007935)	wasb (ENSCARG00000007976) #22	sema3gb (ENSCARG00000008013)	ENSCARG00000008057	gpr173 (ENSCARG00000008061)	suv39h1a (ENSCARG00000008068) #23	mapre1a (ENSCARG00000008088)	dnmt3ba (ENSCARG00000008145)	ENSCARG00000008360	PTK6 (ENSCARG00000008399)	ppdpfa (ENSCARG00000008404)	tpd52l2a (ENSCARG00000008419)	dnajc5aa (ENSCARG00000008451)	ENSCARG00000008439	gid8a (ENSCARG00000008455)	ENSCARG00000008466	BHLHE23 (ENSCARG00000008470)
Cyprininae_a	ANCESTRAL SPECIES	190	ENSGT01030000234625.A.d	ENSGT00390000011228.a.a.b	ENSGT00940000154102.a.g.b	ENSGT00530000063722.a.eb	ENSGT01030000234625.A.c.a	ENSGT00940000154102.a.g.a.a	ENSGT00390000008767.r	ENSGT00390000000705.a	ENSGT00950000183077.b.b	ENSGT00940000156676.d.a	ENSGT00940000161209.d	ENSGT00940000159173.e #19	ENSGT00940000164911.i	ENSGT00390000003809.f	ENSGT00940000166636.c	ENSGT00730000110895.b.b.c.b #22	ENSGT00940000165056.a.b	ENSGT00940000165955.a.b	ENSGT00890000139436.A.b.a.a	ENSGT00940000160063.g.a #23	ENSGT00940000166825	ENSGT00980000199713	ENSGT00490000043329.a.a.a.vb.b.a	ENSGT00940000166425.b	ENSGT00940000165632.b	ENSGT00940000161218.i.b	ENSGT00390000009113.d.d	ENSGT00940000155572.a.b.b	ENSGT00940000155597.u.a.a	ENSGT00940000158186.h.b	ENSGT00390000015162.c.b
Common carp reference	MODERN SPECIES	23	srpk1a (ENSCCRG00000012836)	ENSCCRG00000011952	ENSCCRG00000061142	ENSCCRG00000008100	si:ch211-163l21.7 (ENSCCRG00000008050)	ENSCCRG00000050215	rpl10a (ENSCCRG00000073150)	fance (ENSCCRG00000050167)	mkrn4 (ENSCCRG00000058734)	ppardb (ENSCCRG00000050104)	ENSCCRG00000074591	tbc1d25 (ENSCCRG00000081033) #19	nt5dc2 (ENSCCRG00000001386)	ccdc22 (ENSCCRG00000050028)	slc38a5b (ENSCCRG00000048683)	wasb (ENSCCRG00000048673) #22	sema3gb (ENSCCRG00000047754)	ENSCCRG00000074175	gpr173 (ENSCCRG00000065599)	suv39h1a (ENSCCRG00000041194) #23	ENSCCRG00000014191	mapre1a (ENSCCRG00000047695)	dnmt3ba (ENSCCRG00000041848)	ENSCCRG00000013944	ppdpfa (ENSCCRG00000078472)	ENSCCRG00000013965	tpd52l2a (ENSCCRG00000075132)	dnajc5aa (ENSCCRG00000054068)	ENSCCRG00000014139	gid8a (ENSCCRG00000060312)	BHLHE23 (ENSCCRG00000008738)
Golden-line barbel	MODERN SPECIES	383	srpk1a (ENSSGRG00000002309)	MAPK14 (ENSSGRG00000003893)	ELAPOR1 (ENSSGRG00000008161)	si:ch211-163l21.7 (ENSSGRG00000008201)	zgc:195245 (ENSSGRG00000008204)	ENSSGRG00000008206	ENSSGRG00000008208	rpl10a (ENSSGRG00000008214)	fance (ENSSGRG00000008303)	mkrn4 (ENSSGRG00000008304)	ppardb (ENSSGRG00000008305)	ENSSGRG00000008330	tbc1d25 (ENSSGRG00000008331) #19	ccdc22 (ENSSGRG00000008335)	slc38a5b (ENSSGRG00000008606)	wasb (ENSSGRG00000009595) #22	sema3gb (ENSSGRG00000009605)	ENSSGRG00000009840	gpr173 (ENSSGRG00000009842)	suv39h1a (ENSSGRG00000009843) #23	ENSSGRG00000009846	ENSSGRG00000009848	mapre1a (ENSSGRG00000009850)	dnmt3ba (ENSSGRG00000009887)	ENSSGRG00000011910	ENSSGRG00000011912	PTK6 (ENSSGRG00000011914)	ppdpfa (ENSSGRG00000011917)	tpd52l2a (ENSSGRG00000011920)	dnajc5aa (ENSSGRG00000011937)	ENSSGRG00000011951
Zebrafish	MODERN SPECIES	23	ELAPOR1 (ENSDARG00000042899)	si:ch211-163l21.7 (ENSDARG00000034457)	zgc:195245 (ENSDARG00000078917)	ENSDARG00000078155	ENSDARG00000095855	rpl10a (ENSDARG00000042905)	fance (ENSDARG00000068870)	mkrn4 (ENSDARG00000028295)	ppardb (ENSDARG00000009473)	si:ch73-237c6.1 (ENSDARG00000078114)	cfp (ENSDARG00000094451)	tbc1d25 (ENSDARG00000075333) #19	nt5dc2 (ENSDARG00000059646)	ccdc22 (ENSDARG00000052379)	slc38a5b (ENSDARG00000014587)	wasb (ENSDARG00000026350) #22	sema3gb (ENSDARG00000013607)	ENSDARG00000078279	gpr173 (ENSDARG00000042922)	suv39h1a (ENSDARG00000026799) #23	ENSDARG00000095805	mapre1a (ENSDARG00000042927)	dnmt3ba (ENSDARG00000052402)	ENSDARG00000074902	ENSDARG00000094197	ENSDARG00000017947	ppdpfa (ENSDARG00000007682)	tpd52l2a (ENSDARG00000027154)	ENSDARG00000095724	dnajc5aa (ENSDARG00000042948)	ENSDARG00000042954
Clupeiformes	ANCESTRAL SPECIES	80														ENSGT00390000003809	ENSGT00940000166636	ENSGT00730000110895.b.b.c #22	ENSGT00940000165056.a	ENSGT00940000165955.a	ENSGT00890000139436.A.b.a	ENSGT00940000160063.g.a #23	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a.e #17	ENSGT00950000183062.a.b.b.b	ENSGT00940000164755.C	ENSGT00940000164755.A	ENSGT00940000159855	ENSGT01030000234637.b.c.g	ENSGT00990000203541.b	ENSGT00940000159563 #27	ENSGT00940000166313.b	ENSGT00940000159128
Atlantic herring	MODERN SPECIES	20	acot7 (ENSCHAG00000026796)	hes2.2 (ENSCHAG00000026777)	HES2 (ENSCHAG00000026775)	espn (ENSCHAG00000026767)	qars1 (ENSCHAG00000026024)	ENSCHAG00000025895	ENSCHAG00000025886	ENSCHAG00000025879	ENSCHAG00000025875	rho (ENSCHAG00000025873)	MAGI1 (ENSCHAG00000025774)	tbc1d25 (ENSCHAG00000025739) #19	nt5dc2 (ENSCHAG00000025665)	ccdc22 (ENSCHAG00000025621)	slc38a5b (ENSCHAG00000024776)	wasb (ENSCHAG00000024714) #22	sema3gb (ENSCHAG00000023679)	ENSCHAG00000023582	gpr173 (ENSCHAG00000023579)	suv39h1a (ENSCHAG00000023568) #23	ENSCHAG00000023563	porcnl (ENSCHAG00000023537) #17	PDZD4 (ENSCHAG00000023531)	IQSEC2 (ENSCHAG00000023492)	ENSCHAG00000023482	ENSCHAG00000023470	ENSCHAG00000023464	cacna1fb (ENSCHAG00000018435)	sypa (ENSCHAG00000018272)	plp2a (ENSCHAG00000018231)	ENSCHAG00000018208
Denticle herring	MODERN SPECIES	1	wdr13 (ENSDCDG00000029274) #21	IQSEC2 (ENSDCDG00000029322)	ENSDCDG00000030111	ENSDCDG00000030116	gpkow (ENSDCDG00000030122)	pqbp1 (ENSDCDG00000030126) #31	mkrn4 (ENSDCDG00000030129)	timm17b (ENSDCDG00000030131) #30	praf2 (ENSDCDG00000030134)	jph2 (ENSDCDG00000030136)	GDAP1L1 (ENSDCDG00000030139)	fitm2 (ENSDCDG00000030141)	nt5dc2 (ENSDCDG00000030150)	ccdc22 (ENSDCDG00000030414)	slc38a5b (ENSDCDG00000030450)	wasb (ENSDCDG00000031292) #22	sema3gb (ENSDCDG00000031324)	ENSDCDG00000031488	gpr173 (ENSDCDG00000031490)	suv39h1a (ENSDCDG00000031494) #23	porcnl (ENSDCDG00000003101) #17	PDZD4 (ENSDCDG00000003239)	IQSEC2 (ENSDCDG00000003279)	ENSDCDG00000003333	ENSDCDG00000003340	cacna1fb (ENSDCDG00000003632)	sypa (ENSDCDG00000007864)	ENSDCDG00000007895	HDAC6 (ENSDCDG00000008185) #27	ENSDCDG00000012998	cdk20 (ENSDCDG00000013012)
Otomorpha	ANCESTRAL SPECIES	144	ENSGT00940000166169	ENSGT00390000008631.b	ENSGT00390000017780.e #30	ENSGT00950000183102.C #31	ENSGT00390000015154	ENSGT00940000164755.D	ENSGT00940000159667.b	ENSGT00940000164196.d	ENSGT00390000013740	ENSGT00390000011228.b.a.f	ENSGT00940000159173 #19	ENSGT00940000164911	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233 #15	ENSGT00730000110895.b.b.d #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000165955.b	ENSGT00940000157682.A	ENSGT00940000160063.g.b #23	ENSGT00940000153634.a #21	ENSGT00980000198631	ENSGT01030000234564.a.a.b.a.f #17	ENSGT00950000183062.a.b.b.a
Otophysi	ANCESTRAL SPECIES	65	ENSGT00950000183146.a.b.b	ENSGT00950000182998.C.a.k	ENSGT00940000153567.b.b	ENSGT00940000158399	ENSGT00950000183011.d.c	ENSGT00940000157663	ENSGT00940000158169.b	ENSGT00390000001958	ENSGT00940000160260	ENSGT00950000182846.a.a.a.a.b	ENSGT00940000160093.b	ENSGT00940000159925	ENSGT00390000006349	ENSGT00940000153544.a.i.b	ENSGT00940000161233 #15	ENSGT00730000110895.b.b.d #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000165955.b	ENSGT00940000157682.A	ENSGT00940000160063.g.b #23	ENSGT00390000000819.b	ENSGT00940000158289.a.b.b	ENSGT00390000009368	ENSGT00390000012058.c.b	ENSGT00940000154171.A	ENSGT01030000234528.B.a.a.b.a	ENSGT01030000234528.B.a.a.a	ENSGT00940000159912	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a
Characiphysae	ANCESTRAL SPECIES	30	ENSGT00950000183146.a.b.b	ENSGT00950000182998.C.a.k	ENSGT00940000153567.b.b	ENSGT00940000158399	ENSGT00950000183011.d.c.i	ENSGT00940000157663	ENSGT00940000158169.b	ENSGT00390000001958	ENSGT00940000160260	ENSGT00950000182846.a.a.a.a.b	ENSGT00940000160093.b	ENSGT00940000159925	ENSGT00390000006349	ENSGT00940000153544.a.i.b	ENSGT00940000161233 #15	ENSGT00730000110895.b.b.d #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000165955.b	ENSGT00940000157682.A	ENSGT00940000160063.g.b #23	ENSGT00390000000819.b	ENSGT00940000158289.a.b.b	ENSGT00390000009368	ENSGT00390000012058.c.b	ENSGT00940000154171.A	ENSGT01030000234528.B.a.a.b.a	ENSGT01030000234528.B.a.a.a	ENSGT00940000159912	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a
Characiphysae_b	ANCESTRAL SPECIES	34	ENSGT00950000183146.a.b.b	ENSGT00950000182998.C.a.k	ENSGT00940000153567.b.b	ENSGT00940000158399	ENSGT00950000183011.d.c.i	ENSGT00940000157663	ENSGT00940000158169.b	ENSGT00390000001958	ENSGT00940000160260	ENSGT00950000182846.a.a.a.a.b	ENSGT00940000160093.b	ENSGT00940000159925	ENSGT00390000006349	ENSGT00940000153544.a.i.b	ENSGT00940000161233 #15	ENSGT00730000110895.b.b.d #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000165955.b	ENSGT00940000157682.A	ENSGT00940000160063.g.b #23	ENSGT00390000000819.b	ENSGT00940000158289.a.b.b	ENSGT00390000009368	ENSGT00390000012058.c.b	ENSGT00940000154171.A	ENSGT01030000234528.B.a.a.b.a	ENSGT01030000234528.B.a.a.a	ENSGT00940000159912	ENSGT00940000157078	ENSGT01100000263518.B.b.a.a
Characoidei	ANCESTRAL SPECIES	221					ENSGT00950000183011.d.c.i	ENSGT00940000157663	ENSGT00940000158169.b	ENSGT00390000001958	ENSGT00940000160260	ENSGT00950000182846.a.a.a.a.b	ENSGT00940000160093.b	ENSGT00940000159925	ENSGT00390000006349	ENSGT00940000153544.a.i.b	ENSGT00940000161233 #15	ENSGT00730000110895.b.b.d #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000165955.b	ENSGT00940000157682.A	ENSGT00940000160063.g.b #23	ENSGT00390000000819.b	ENSGT00940000158289.a.b.b	ENSGT00390000009368	ENSGT00390000012058.c.b
Red-bellied piranha	MODERN SPECIES	458			ENSPNAG00000023126	AMPD2 (ENSPNAG00000023171)	gstm.1 (ENSPNAG00000023190)	eps8l3b (ENSPNAG00000023279)	atp5pb (ENSPNAG00000023325)	ENSPNAG00000023359	dnase1l1l (ENSPNAG00000023384)	ENSPNAG00000023400	kcnq2a (ENSPNAG00000023453)	PREX1 (ENSPNAG00000006762)	ENSPNAG00000023688	stk38a (ENSPNAG00000023726)	ENSPNAG00000006045 #15	ENSPNAG00000003783 #22	sema3ga (ENSPNAG00000023790)	tspy (ENSPNAG00000023832)	foxp3a (ENSPNAG00000023850)	ENSPNAG00000023867	suv39h1b (ENSPNAG00000023883) #23	tmem9 (ENSPNAG00000023912)	cacna1sb (ENSPNAG00000024050)	taf10 (ENSPNAG00000024074)	efhd2 (ENSPNAG00000024103)
Mexicana tetra	MODERN SPECIES	8	ENSAMXG00000010059	ZEB1 (ENSAMXG00000010069)	ENSAMXG00000010078	ENSAMXG00000038324	GSTM3 (ENSAMXG00000000228)	ENSAMXG00000039582	eps8l3b (ENSAMXG00000033958)	atp5pb (ENSAMXG00000029023)	ENSAMXG00000040859	dnase1l1l (ENSAMXG00000041037)	kcnq2a (ENSAMXG00000042966)	PREX1 (ENSAMXG00000000207)	ENSAMXG00000032531	stk38a (ENSAMXG00000000197)	ENSAMXG00000000193 #15	ENSAMXG00000000189 #22	sema3ga (ENSAMXG00000000186)	tspy (ENSAMXG00000031294)	foxp3a (ENSAMXG00000000184)	ENSAMXG00000000183	suv39h1b (ENSAMXG00000029969) #23	tmem9 (ENSAMXG00000033186)	cacna1sb (ENSAMXG00000000179)	taf10 (ENSAMXG00000039831)	efhd2 (ENSAMXG00000000175)	ENSAMXG00000031109	ENSAMXG00000043735
Channel catfish	MODERN SPECIES	24	GPR61 (ENSIPUG00000004141)	GNAI3 (ENSIPUG00000004075)	gnat2 (ENSIPUG00000004057)	ampd2 (ENSIPUG00000004023)	GSTM3 (ENSIPUG00000004002)	eps8l3b (ENSIPUG00000003958)	atp5pb (ENSIPUG00000003892)	ENSIPUG00000003875	dnase1l1l (ENSIPUG00000003858)	kcnq2a (ENSIPUG00000003814)	PREX1 (ENSIPUG00000003623)	ENSIPUG00000003586	STK38 (ENSIPUG00000003521)	dnali1 (ENSIPUG00000003501)	SLC38A3 (ENSIPUG00000003443) #15	WAS (ENSIPUG00000003426) #22	sema3ga (ENSIPUG00000003414)	tspy (ENSIPUG00000003393)	foxp3a (ENSIPUG00000003361)	ENSIPUG00000003351	suv39h1b (ENSIPUG00000003345) #23	tmem9 (ENSIPUG00000003332)	CAC1S (ENSIPUG00000003092)	TAF10 (ENSIPUG00000003048)	efhd2 (ENSIPUG00000003034)	ENSIPUG00000003009	ela2 (ENSIPUG00000002982)	ela2l (ENSIPUG00000002910)	alas2 (ENSIPUG00000002878)	itpr3 (ENSIPUG00000002672)	GPR37L1 (ENSIPUG00000002651)
Cyprinoidei	ANCESTRAL SPECIES	7	ENSGT00950000182998.C.a.k	ENSGT00940000153567.b.b	ENSGT00940000158399	ENSGT00950000183011.d.c	ENSGT00940000154679	ENSGT00940000158169.b	ENSGT00940000157663.w	ENSGT00390000001958	ENSGT00940000160260	ENSGT00950000182846.a.a.a.a.b	ENSGT00940000160093.b	ENSGT00940000159925	ENSGT00390000006349	ENSGT00940000153544.a.i.b	ENSGT00940000161233 #15	ENSGT00730000110895.b.b.d #22	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000165955.b	ENSGT00940000157682.A	ENSGT00940000160063.g.b #23	ENSGT00390000000819.b	ENSGT00940000158289.a.b.b	ENSGT00390000009368	ENSGT00390000012058.c.b	ENSGT01100000263524.B.b.a.b.b	ENSGT00390000002470	ENSGT00950000182945.b.a.a.a.b.a.b	ENSGT00940000166389	ENSGT00490000043453	ENSGT01030000234817
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	37	ENSGT00940000158399.j	ENSGT00950000183011.d.c.g	ENSGT00940000154679	ENSGT00940000158169.b.k.b	ENSGT00940000157663.w.a.b	ENSGT00940000158169.b.k.a.a	ENSGT00390000001958.bc	ENSGT00940000160260.n	ENSGT00950000182846.a.a.a.a.b.b	ENSGT00940000160093.b.a	ENSGT00940000159925.b	ENSGT00390000006349	ENSGT00940000153544.a.i.b.e	ENSGT00940000161233.c.a.b #15	ENSGT00940000161233.c.a.a #15	ENSGT00730000110895.b.b.d.a #22	ENSGT00940000165056.b.b	ENSGT00940000166378.c	ENSGT00940000165955.b.b	ENSGT00940000157682.A.a	ENSGT00940000160063.g.b.a #23	ENSGT00390000000819.b.a.b	ENSGT00940000158289.a.b.b.b	ENSGT00390000009368.f	ENSGT00390000012058.c.b.g	ENSGT01100000263524.B.b.a.b.b.a	ENSGT00390000002470.c	ENSGT00950000182945.b.a.a.a.b.a.b.b	ENSGT00940000166389.e	ENSGT00490000043453.i	ENSGT01020000230364.a.a.a.a.a.b.d
Cyprininae_a	ANCESTRAL SPECIES	39	ENSGT00940000153567.b.b.d	ENSGT00940000158399.j	ENSGT00950000183011.d.c.g	ENSGT00940000154679	ENSGT00940000158169.b.k.b	ENSGT00390000001958.bc	ENSGT00940000160260.n	ENSGT00940000158169.b.k.a.a	ENSGT00950000182846.a.a.a.a.b.b	ENSGT00940000160093.b.a	ENSGT00940000159925.b	ENSGT00390000006349	ENSGT00940000153544.a.i.b.e	ENSGT00940000161233.c.a.b #15	ENSGT00940000161233.c.b #15	ENSGT00730000110895.b.b.d.a #22	ENSGT00940000165056.b.b	ENSGT00940000166378.c	ENSGT00940000165955.b.b	ENSGT00940000157682.A.a	ENSGT00940000160063.g.b.a #23	ENSGT00390000000819.b.a.b	ENSGT00940000158289.a.b.b.b	ENSGT00390000009368.f	ENSGT00390000012058.c.b.g	ENSGT01100000263524.B.b.a.b.b.a	ENSGT00390000002470.c
Golden-line barbel	MODERN SPECIES	398	atxn7l2b (ENSSGRG00000006469)	AMIGO1 (ENSSGRG00000006471)	GPR61 (ENSSGRG00000006473)	gnai3 (ENSSGRG00000006486)	gnat2 (ENSSGRG00000006893)	AMPD2 (ENSSGRG00000007068)	gstm.3 (ENSSGRG00000009828)	eps8l3b (ENSSGRG00000011828)	ENSSGRG00000011829	dnase1l1l (ENSSGRG00000011836)	kcnq2a (ENSSGRG00000011841)	PREX1 (ENSSGRG00000011901)	ENSSGRG00000013279	stk38a (ENSSGRG00000013280)	ENSSGRG00000013441 #15	ENSSGRG00000014381 #22	sema3ga (ENSSGRG00000014384)	tspy (ENSSGRG00000014452)	foxp3a (ENSSGRG00000014455)	suv39h1b (ENSSGRG00000014457) #23	cacna1sb (ENSSGRG00000014482)	taf10 (ENSSGRG00000015614)	efhd2 (ENSSGRG00000015619)	opn7c (ENSSGRG00000015620)	tmem115 (ENSSGRG00000015621)
Common carp reference	MODERN SPECIES	23	AMIGO1 (ENSCCRG00000065377)	GPR61 (ENSCCRG00000061349)	gnai3 (ENSCCRG00000026983)	gnat2 (ENSCCRG00000080572)	AMPD2 (ENSCCRG00000026998)	GSTM4 (ENSCCRG00000021819)	eps8l3b (ENSCCRG00000001873)	atp5pb (ENSCCRG00000054042)	ENSCCRG00000021800	dnase1l1l (ENSCCRG00000021676)	kcnq2a (ENSCCRG00000020396)	ENSCCRG00000017510	ENSCCRG00000020188	stk38a (ENSCCRG00000017390)	ENSCCRG00000020117 #15	ENSCCRG00000074288 #22	sema3ga (ENSCCRG00000020091)	tspy (ENSCCRG00000057702)	foxp3a (ENSCCRG00000017214)	ENSCCRG00000017211	suv39h1b (ENSCCRG00000077932) #23	tmem9 (ENSCCRG00000072089)	cacna1sb (ENSCCRG00000017260)	taf10 (ENSCCRG00000017003)	efhd2 (ENSCCRG00000075498)	opn7c (ENSCCRG00000016965)	tmem115 (ENSCCRG00000016963)	rhoab (ENSCCRG00000016922)	sema3h (ENSCCRG00000016938)	borcs6 (ENSCCRG00000016929)	si:dkey-72l14.3 (ENSCCRG00000016927)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	48	gnai3 (ENSCARG00000002946)	gnat2 (ENSCARG00000002924)	AMPD2 (ENSCARG00000002305)	gstm.3 (ENSCARG00000002036)	gstm.3 (ENSCARG00000001989)	ENSCARG00000001964	eps8l3b (ENSCARG00000001949)	atp5pb (ENSCARG00000001932)	ENSCARG00000001914	dnase1l1l (ENSCARG00000001910)	kcnq2a (ENSCARG00000001530)	PREX1 (ENSCARG00000001360)	ENSCARG00000001256	stk38a (ENSCARG00000001251)	ENSCARG00000001215 #15	ENSCARG00000001197 #22	sema3ga (ENSCARG00000001134)	tspy (ENSCARG00000001097)	foxp3a (ENSCARG00000001090)	ENSCARG00000001086	suv39h1b (ENSCARG00000001081) #23	tmem9 (ENSCARG00000001073)	taf10 (ENSCARG00000000998)	efhd2 (ENSCARG00000000993)	opn7c (ENSCARG00000000986)	tmem115 (ENSCARG00000000984)	rhoab (ENSCARG00000000980)	gnat2 (ENSCARG00000000977)	gnai3 (ENSCARG00000000969)	GPR61 (ENSCARG00000000965)	AMIGO1 (ENSCARG00000000962)
Goldfish	MODERN SPECIES	350														ENSCARG00000057788 #15	ENSCARG00000057870 #15	ENSCARG00000058366 #22	sema3ga (ENSCARG00000058401)	tspy (ENSCARG00000058901)
Cyprininae	ANCESTRAL SPECIES	27	ENSGT00940000159736.a.d	ENSGT00950000183146.a.b.b.a	ENSGT00950000182998.C.a.k.d	ENSGT00940000153567.b.b.c	ENSGT00940000158399.i	ENSGT00950000183011.d.c.h	ENSGT00940000157663.w.b	ENSGT00940000158169.b.l	ENSGT00390000001958.ac	ENSGT00940000160260.m	ENSGT00950000182846.a.a.a.a.b.a	ENSGT00940000160093.b.b	ENSGT00940000159925.a	ENSGT00940000153544.a.i.b.f	ENSGT00940000161233.d #15	ENSGT00730000110895.b.b.d.b #22	ENSGT00940000165056.b.a	ENSGT00940000166378.d	ENSGT00940000165955.b.a	ENSGT00940000157682.A.b	ENSGT00940000160063.g.b.b #23	ENSGT00390000000819.b.a.a	ENSGT00940000158289.a.b.b.a	ENSGT00390000009368.e	ENSGT00390000012058.c.b.h	ENSGT01100000263524.B.b.a.b.b.b	ENSGT00390000002470.d	ENSGT00950000182945.b.a.a.a.b.a.b.a	ENSGT00940000166389.f	ENSGT00490000043453.j	ENSGT01030000234817
Goldfish	MODERN SPECIES	1243	sort1b (ENSCARG00000057460)	sypl2b (ENSCARG00000057795)	AMIGO1 (ENSCARG00000057897)	GPR61 (ENSCARG00000057904)	gnai3 (ENSCARG00000057914)	gnat2 (ENSCARG00000057999)	AMPD2 (ENSCARG00000058135)	gstm.3 (ENSCARG00000058947)	eps8l3b (ENSCARG00000059030)	atp5pb (ENSCARG00000059060)	ENSCARG00000059130	kcnq2a (ENSCARG00000059225)	PREX1 (ENSCARG00000061470)	stk38a (ENSCARG00000062915)	ENSCARG00000062969 #15	ENSCARG00000063055 #22	sema3ga (ENSCARG00000063095)	tspy (ENSCARG00000063417)	foxp3a (ENSCARG00000063522)	ENSCARG00000063603	suv39h1b (ENSCARG00000063616) #23	tmem9 (ENSCARG00000063658)	cacna1sb (ENSCARG00000063839)	taf10 (ENSCARG00000065568)	efhd2 (ENSCARG00000065583)	opn7c (ENSCARG00000065588)	tmem115 (ENSCARG00000065595)	rhoab (ENSCARG00000065601)	sema3h (ENSCARG00000065623)	borcs6 (ENSCARG00000065662)	ENSCARG00000065673
Cyprininae_a	ANCESTRAL SPECIES	45	ENSGT00950000182998.C.a.k.d	ENSGT00940000153567.b.b.c	ENSGT00940000158399.i	ENSGT00950000183011.d.c.h	ENSGT00940000158169.b.l	ENSGT00940000157663.w.b	ENSGT00940000157663.w.a.b	ENSGT00940000158169.b.k.a.b	ENSGT00390000001958.ac	ENSGT00940000160260.m	ENSGT00950000182846.a.a.a.a.b.a	ENSGT00940000160093.b.b	ENSGT00940000159925.a	ENSGT00940000153544.a.i.b.f	ENSGT00940000161233.d #15	ENSGT00730000110895.b.b.d.b #22	ENSGT00940000165056.b.a	ENSGT00940000166378.d	ENSGT00940000165955.b.a	ENSGT00940000157682.A.b	ENSGT00940000160063.g.b.b #23	ENSGT00390000000819.b.a.a	ENSGT00940000158289.a.b.b.a	ENSGT00390000009368.e	ENSGT00390000012058.c.b.h	ENSGT01100000263524.B.b.a.b.b.b	ENSGT00390000002470.d	ENSGT00950000182945.b.a.a.a.b.a.b.a	ENSGT00940000166389.f	ENSGT00490000043453.j	ENSGT01020000230364.a.a.a.a.a.b.c
Common carp reference	MODERN SPECIES	17	atxn7l2b (ENSCCRG00000042829)	AMIGO1 (ENSCCRG00000052795)	GPR61 (ENSCCRG00000073898)	gnai3 (ENSCCRG00000065198)	gnat2 (ENSCCRG00000026969)	AMPD2 (ENSCCRG00000027416)	gstm.3 (ENSCCRG00000027424)	eps8l3b (ENSCCRG00000021792)	atp5pb (ENSCCRG00000021686)	ENSCCRG00000021678	dnase1l1l (ENSCCRG00000070074)	kcnq2a (ENSCCRG00000020074)	ENSCCRG00000020214	stk38a (ENSCCRG00000020185)	ENSCCRG00000015171 #15	ENSCCRG00000064091 #22	sema3ga (ENSCCRG00000006401)	tspy (ENSCCRG00000006392)	foxp3a (ENSCCRG00000006389)	ENSCCRG00000073286	ENSCCRG00000060756	suv39h1b (ENSCCRG00000017203) #23	tmem9 (ENSCCRG00000057086)	cacna1sb (ENSCCRG00000017038)	taf10 (ENSCCRG00000008696)	efhd2 (ENSCCRG00000071003)	opn7c (ENSCCRG00000032504)	tmem115 (ENSCCRG00000032502)	rhoab (ENSCCRG00000071054)	sema3h (ENSCCRG00000010520)	borcs6 (ENSCCRG00000010527)
Golden-line barbel	MODERN SPECIES	145	ENSSGRG00000032804	atxn7l2b (ENSSGRG00000032803)	AMIGO1 (ENSSGRG00000032802)	GPR61 (ENSSGRG00000032801)	gnai3 (ENSSGRG00000031972)	gnat2 (ENSSGRG00000031926)	AMPD2 (ENSSGRG00000031925)	gstm.3 (ENSSGRG00000031916)	ENSSGRG00000031914	eps8l3b (ENSSGRG00000031912)	atp5pb (ENSSGRG00000031911)	dnase1l1l (ENSSGRG00000031901)	kcnq2a (ENSSGRG00000031891)	PREX1 (ENSSGRG00000031772)	ENSSGRG00000031720 #15	ENSSGRG00000031717 #22	sema3ga (ENSSGRG00000031349)	tspy (ENSSGRG00000031348)	foxp3a (ENSSGRG00000031347)	suv39h1b (ENSSGRG00000031345) #23	cacna1sb (ENSSGRG00000031318)	taf10 (ENSSGRG00000031314)	efhd2 (ENSSGRG00000031313)	opn7c (ENSSGRG00000031312)	tmem115 (ENSSGRG00000031311)	rhoab (ENSSGRG00000031292)	sema3h (ENSSGRG00000031290)	borcs6 (ENSSGRG00000031288)	si:dkey-72l14.3 (ENSSGRG00000031272)	ENSSGRG00000031270	arih2 (ENSSGRG00000031120)
Zebrafish	MODERN SPECIES	23	gnat2 (ENSDARG00000042529)	AMPD2 (ENSDARG00000029952)	gstm.1 (ENSDARG00000042533)	gstm.2 (ENSDARG00000029473)	gstm.3 (ENSDARG00000088116)	eps8l3b (ENSDARG00000005704)	atp5pb (ENSDARG00000011553)	ENSDARG00000086708	dnase1l1l (ENSDARG00000023861)	ENSDARG00000077907	kcnq2a (ENSDARG00000075307)	PREX1 (ENSDARG00000075793)	ENSDARG00000042536	stk38a (ENSDARG00000019973)	SLC38A5 (ENSDARG00000009901) #15	ENSDARG00000015149 #22	sema3ga (ENSDARG00000042545)	tspy (ENSDARG00000005015)	foxp3a (ENSDARG00000055750)	ENSDARG00000097877	suv39h1b (ENSDARG00000055753) #23	tmem9 (ENSDARG00000055757)	cacna1sb (ENSDARG00000042552)	taf10 (ENSDARG00000068641)	efhd2 (ENSDARG00000055759)	opn7c (ENSDARG00000030867)	tmem115 (ENSDARG00000055763)	rhoab (ENSDARG00000094673)	sema3h (ENSDARG00000042616)	borcs6 (ENSDARG00000061023)	si:dkey-72l14.3 (ENSDARG00000061044)
Osteoglossiformes	ANCESTRAL SPECIES	285											ENSGT00940000159173 #19	ENSGT00940000164911	ENSGT00940000154471.a.a.b	ENSGT00390000003809	ENSGT00940000166636	ENSGT00730000110895.b.b #22	ENSGT00940000165056.a	ENSGT00940000166378	ENSGT00940000165955	ENSGT00890000139436.A.b.a.i	ENSGT00940000160063 #23	ENSGT00940000153634.a #21	ENSGT00940000166825	ENSGT01030000234564.a.a.b.a #17	ENSGT00950000183062.a.b.b.a.f	ENSGT00940000164196.c.a.a	ENSGT00940000159667.a	ENSGT00940000164755.D.a	ENSGT01030000234637.b.c.g	ENSGT00940000153629.a.b.c
Asian bonytongue	MODERN SPECIES		kmt5ab (ENSSFOG00015019013)	sbno1 (ENSSFOG00015019025)	CDK2AP1 (ENSSFOG00015019104)	mtrfr (ENSSFOG00015026668)	MPHOSPH9 (ENSSFOG00015019131)	PITPNM2 (ENSSFOG00015019153)	arl6ip4 (ENSSFOG00015030592)	mthfd2 (ENSSFOG00015019212)	mob1a (ENSSFOG00015019239)	dguok (ENSSFOG00015019257)	ENSSFOG00015029722	EIF4EBP1 (ENSSFOG00015027221)	ANK1 (ENSSFOG00015019367)	ccdc22 (ENSSFOG00015019957)	slc38a5b (ENSSFOG00015019972)	wasb (ENSSFOG00015019997) #22	sema3gb (ENSSFOG00015020068)	tspy (ENSSFOG00015020119)	foxp3a (ENSSFOG00015020151)	gpr173 (ENSSFOG00015020173)	suv39h1b (ENSSFOG00015020184) #23	wdr13 (ENSSFOG00015020215) #21	ENSSFOG00015031785	porcnl (ENSSFOG00015000133) #17	ENSSFOG00015000272	PDZD4 (ENSSFOG00015000289)	kdm5c (ENSSFOG00015000299)	IQSEC2 (ENSSFOG00015000482)	ENSSFOG00015000499	timm17b (ENSSFOG00015000513) #30	cacna1fb (ENSSFOG00015000557)
P. kingsleyae	MODERN SPECIES	171	wdr46 (ENSPKIG00000011681)	ENSPKIG00000011646	ENSPKIG00000011614	ENSPKIG00000011563	ENSPKIG00000011530	ENSPKIG00000011505	ogg1 (ENSPKIG00000011480)	ENSPKIG00000011455	QRICH1 (ENSPKIG00000011401)	tbc1d25 (ENSPKIG00000011364) #19	ENSPKIG00000011338	nt5dc2 (ENSPKIG00000011294)	zgc:162200 (ENSPKIG00000011259)	ccdc22 (ENSPKIG00000011235)	slc38a5b (ENSPKIG00000011198)	wasb (ENSPKIG00000011135) #22	sema3gb (ENSPKIG00000011058)	tspy (ENSPKIG00000010967)	gpr173 (ENSPKIG00000010918)	suv39h1b (ENSPKIG00000010905) #23	wdr13 (ENSPKIG00000010852) #21	ENSPKIG00000010800	porcnl (ENSPKIG00000010726) #17	ENSPKIG00000010683	PDZD4 (ENSPKIG00000010638)	kdm5c (ENSPKIG00000010475)	IQSEC2 (ENSPKIG00000010321)	ENSPKIG00000010214	ENSPKIG00000010181	cacna1fb (ENSPKIG00000010113)	sypa (ENSPKIG00000010067)
Spotted gar	MODERN SPECIES	647	alas2 (ENSLOCG00000014541)	ENSLOCG00000014538	ENSLOCG00000014533	kcnd1 (ENSLOCG00000014523)	gripap1 (ENSLOCG00000014510) #36	MON1B (ENSLOCG00000014503)	ptpn18 (ENSLOCG00000014499)	ENSLOCG00000014494	renbp (ENSLOCG00000014488)	FAM107A (ENSLOCG00000014487)	nt5dc2 (ENSLOCG00000014477)	zgc:162200 (ENSLOCG00000014473)	apex2 (ENSLOCG00000014467)	ccdc22 (ENSLOCG00000014464)	SLC38A5 (ENSLOCG00000014448) #15	wasb (ENSLOCG00000014446) #22	tspy (ENSLOCG00000014443)	sema3ga (ENSLOCG00000014436)	ENSLOCG00000014427	ENSLOCG00000014425	gpr173 (ENSLOCG00000017977)	ENSLOCG00000014423	suv39h1b (ENSLOCG00000014420) #23	ENSLOCG00000014418	ccdc115 (ENSLOCG00000014417)	vgll4l (ENSLOCG00000014414)	ENSLOCG00000014410	syn1 (ENSLOCG00000014401)	imp4 (ENSLOCG00000014398)	ENSLOCG00000014394	araf (ENSLOCG00000014384)
Reedfish	MODERN SPECIES	2	ENSECRG00000020187	tfe3a (ENSECRG00000020165) #37	ccdc120b (ENSECRG00000020130)	abcd1 (ENSECRG00000020092)	ENSECRG00000020026	SRPK3 (ENSECRG00000019992)	opn1lw1 (ENSECRG00000019957)	opn1sw2 (ENSECRG00000019604)	suv39h1b (ENSECRG00000019506) #23	ENSECRG00000019467	gpr173 (ENSECRG00000019448)	ENSECRG00000019430	ENSECRG00000019376	ccdc22 (ENSECRG00000019320)	ENSECRG00000019275 #15	wasb (ENSECRG00000019242) #22	tspy (ENSECRG00000019185)	sema3ga (ENSECRG00000019132)	ENSECRG00000019105	apex2 (ENSECRG00000019086)	zgc:162200 (ENSECRG00000019059)	nt5dc2 (ENSECRG00000019029)	ENSECRG00000019006	renbp (ENSECRG00000018978)	emd (ENSECRG00000018947)	FLNA (ENSECRG00000018908)	rpl10 (ENSECRG00000018805)	dnase1l1l (ENSECRG00000018657)	atp6ap1a (ENSECRG00000018605)	ENSECRG00000018583	tafazzin (ENSECRG00000018534)