Amniota	ANCESTRAL SPECIES	11	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT00390000014156
Mammalia	ANCESTRAL SPECIES	11	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT00390000014547 #36	ENSGT00960000187139
Theria	ANCESTRAL SPECIES	10	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547 #36
Eutheria	ANCESTRAL SPECIES	22	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139
Boreoeutheria	ANCESTRAL SPECIES	12	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36
Euarchontoglires	ANCESTRAL SPECIES	12	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36
Primates	ANCESTRAL SPECIES	11	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139
Haplorrhini	ANCESTRAL SPECIES	26	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a
Simiiformes	ANCESTRAL SPECIES	26	ENSGT00510000046986.n #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a.k.a.a
Platyrrhini	ANCESTRAL SPECIES	19	ENSGT00510000046986.n #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300.`b #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b.z.b ##13	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B.i.a #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a.c #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.d	ENSGT00390000015826 #29	ENSGT00940000157605.c #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a.k.a.a	ENSGT00940000156486
Cebidae	ANCESTRAL SPECIES	24	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300.`b #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b.z.b ##13	ENSGT00950000183183.b.b.z.a ##13	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B.i.a #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a.c #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.d	ENSGT00390000015826 #29	ENSGT00940000157605.c #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a.k.a.a	ENSGT00940000156486
Cebidae_a	ANCESTRAL SPECIES	19	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300.`b #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b.z.b ##13	ENSGT00950000183183.b.b.y #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B.i.a #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a.c #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00950000183000.c.a.a.i.a.a.b.a.a.d	ENSGT00390000015826 #29	ENSGT00940000157605.c #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a.k.b.b	ENSGT00940000153500.a.a.k.a.a	ENSGT00940000156486
Capuchin	MODERN SPECIES	82	ENSCCAG00000017059 #7	CPSF4 (ENSCCAG00000028291) #8	PTCD1 (ENSCCAG00000034025) #9	BUD31 (ENSCCAG00000021788) #10	PDAP1 (ENSCCAG00000031892) #11	ENSCCAG00000037322 #12	ARPC1A (ENSCCAG00000019780) #13	ENSCCAG00000024944 #14	ENSCCAG00000037962 #15	SMURF1 (ENSCCAG00000037956) #16	TRRAP (ENSCCAG00000031555) #17	TMEM130 (ENSCCAG00000021884) #18	NPTX2 (ENSCCAG00000021986) #19	BAIAP2L1 (ENSCCAG00000022124) #20	BRI3 (ENSCCAG00000022002) #21	TECPR1 (ENSCCAG00000022147) #22	LMTK2 (ENSCCAG00000021992) #23	ENSCCAG00000027694 #24	ENSCCAG00000008446 #25	ENSCCAG00000000590 #26	ENSCCAG00000023211 #27	PMS2 (ENSCCAG00000034137) #28	AIMP2 (ENSCCAG00000029971) #29	EIF2AK1 (ENSCCAG00000038031) #30	ANKRD61 (ENSCCAG00000016823) #31	ENSCCAG00000024128 #32	USP42 (ENSCCAG00000033459) #33	ENSCCAG00000033290 #34	CYTH3 (ENSCCAG00000023188) #35	ENSCCAG00000023146 #36	ENSCCAG00000030315 #37
Bolivian squirrel monkey	MODERN SPECIES	104	ZNF394 (ENSSBOG00000026184)	ATP5MF (ENSSBOG00000032284) #7	CPSF4 (ENSSBOG00000020493) #8	PTCD1 (ENSSBOG00000024114) #9	BUD31 (ENSSBOG00000027048) #10	ENSSBOG00000035146 #11	ARPC1B (ENSSBOG00000017784) ##13	ENSSBOG00000035988 #14	ENSSBOG00000032329 #15	SMURF1 (ENSSBOG00000026488) #16	TRRAP (ENSSBOG00000022151) #17	TMEM130 (ENSSBOG00000023597) #18	NPTX2 (ENSSBOG00000029192) #19	ENSSBOG00000018064 #20	ENSSBOG00000032858 #21	TECPR1 (ENSSBOG00000018971) #22	LMTK2 (ENSSBOG00000035095) #23	ENSSBOG00000021103 #24	ENSSBOG00000032415 #25	ENSSBOG00000031799 #27	PMS2 (ENSSBOG00000028728) #28	ENSSBOG00000027924	AIMP2 (ENSSBOG00000024906) #29	EIF2AK1 (ENSSBOG00000026446) #30	ANKRD61 (ENSSBOG00000024193) #31	USP42 (ENSSBOG00000032011) #33	CYTH3 (ENSSBOG00000026269) #35	ENSSBOG00000024828	DAGLB (ENSSBOG00000034747)	KDELR2 (ENSSBOG00000025326)	GRID2IP (ENSSBOG00000029841)
Marmoset	MODERN SPECIES	11	ATP5MF (ENSCJAG00000045628) #7	CPSF4 (ENSCJAG00000015826) #8	PTCD1 (ENSCJAG00000015815) #9	BUD31 (ENSCJAG00000015836) #10	PDAP1 (ENSCJAG00000015838) #11	ENSCJAG00000015849 ##13	ENSCJAG00000015859 #13	KPNA7 (ENSCJAG00000015943) #15	SMURF1 (ENSCJAG00000046325) #16	TRRAP (ENSCJAG00000016008) #17	TMEM130 (ENSCJAG00000016109) #18	ENSCJAG00000078860	NPTX2 (ENSCJAG00000015220) #19	BAIAP2L1 (ENSCJAG00000031937) #20	BRI3 (ENSCJAG00000071589) #21	TECPR1 (ENSCJAG00000033050) #22	BHLHA15 (ENSCJAG00000023085)	LMTK2 (ENSCJAG00000015240) #23	ENSCJAG00000015258 #24	ENSCJAG00000015269 #25	ENSCJAG00000015308 #27	PMS2 (ENSCJAG00000015340) #28	AIMP2 (ENSCJAG00000015370) #29	EIF2AK1 (ENSCJAG00000015372) #30	ANKRD61 (ENSCJAG00000015402) #31	USP42 (ENSCJAG00000015403) #33	CYTH3 (ENSCJAG00000046741) #35	ENSCJAG00000084892 #36	RAC1 (ENSCJAG00000015455)	DAGLB (ENSCJAG00000015461)	KDELR2 (ENSCJAG00000015474)
Mas night monkey	MODERN SPECIES	556	ATP5MF (ENSANAG00000021638) #7	CPSF4 (ENSANAG00000021360) #8	PTCD1 (ENSANAG00000035790) #9	ENSANAG00000027119 #10	PDAP1 (ENSANAG00000035351) #11	ENSANAG00000023601 ##13	ARPC1A (ENSANAG00000038029) #13	ENSANAG00000019992 #14	ENSANAG00000024791 #15	SMURF1 (ENSANAG00000031906) #16	TRRAP (ENSANAG00000031335) #17	TMEM130 (ENSANAG00000034905) #18	NPTX2 (ENSANAG00000037968) #19	ENSANAG00000024350 #20	BRI3 (ENSANAG00000027654) #21	TECPR1 (ENSANAG00000034833) #22	LMTK2 (ENSANAG00000030215) #23	ENSANAG00000024814 #24	ENSANAG00000034191 #25	ENSANAG00000008157 #27	PMS2 (ENSANAG00000030348) #28	ENSANAG00000009006	AIMP2 (ENSANAG00000029275) #29	ENSANAG00000030962 #30	ANKRD61 (ENSANAG00000030693) #31	USP42 (ENSANAG00000033749) #33	CYTH3 (ENSANAG00000018615) #35	ENSANAG00000036757 #36	ENSANAG00000019572	ENSANAG00000035216	DAGLB (ENSANAG00000036166)
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.m #11	ENSGT00390000018509.a.n #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.c #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a.k.b	ENSGT00390000014156.c
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00390000002944.e.b	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.n.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.d #25	ENSGT00940000154303.B	ENSGT00940000162728	ENSGT00940000156663.B	ENSGT00390000011370	ENSGT00910000146965	ENSGT00920000149163	ENSGT00940000157625.b	ENSGT00390000004010.a.b.a	ENSGT00940000156486	ENSGT00940000153500.a.a.k.a.a	ENSGT00390000014156.c
Hominidae	ANCESTRAL SPECIES	26	ENSGT00390000002944.e.b	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.n.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486.g.a #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.d #25	ENSGT00940000155974.i.a	ENSGT00940000153253.b.a.g	ENSGT00940000154303.C.g.b	ENSGT00940000154173.A.a.c.a	ENSGT00940000154303.B	ENSGT00940000162728	ENSGT00940000156663.B	ENSGT00390000011370	ENSGT00910000146965	ENSGT00920000149163	ENSGT00940000157625.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.n.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00950000183087.A.a.b.a.g.b.a.b	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486.g.a #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875.c.b #24	ENSGT00390000004713.d.a #25	ENSGT00390000001994.u	ENSGT00390000002457	ENSGT00390000010029	ENSGT00940000159188	ENSGT00940000157683	ENSGT00910000146930	ENSGT00940000163409	ENSGT00390000002695	ENSGT00940000162732	ENSGT00940000159344	ENSGT00940000156032
Homo/Pan group	ANCESTRAL SPECIES	15	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.n.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00950000183087.A.a.b.a.g.b.a.b	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486.g.a #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875.c.b #24	ENSGT00390000004713.d.a #25	ENSGT00390000001994.u	ENSGT00390000002457	ENSGT00390000010029	ENSGT00940000159188	ENSGT00940000157683	ENSGT00910000146930	ENSGT00940000163409	ENSGT00390000002695	ENSGT00940000162732	ENSGT00940000159344	ENSGT00940000156032
Pan	ANCESTRAL SPECIES	13	ENSGT00390000002944.e.b	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.n.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486.g.a #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875.c.b #24	ENSGT00390000004713.d.a #25	ENSGT00390000001994.u	ENSGT00390000002457	ENSGT00390000010029	ENSGT00940000159188	ENSGT00940000157683	ENSGT00910000146930	ENSGT00940000163409	ENSGT00390000002695	ENSGT00940000159344	ENSGT00940000156032	ENSGT01030000234646.B.a.a.a.b
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	20	CPSF4 (ENSPTRG00000019453) #8	PTCD1 (ENSPTRG00000019452) #9	BUD31 (ENSPTRG00000019451) #10	PDAP1 (ENSPTRG00000041711) #11	ARPC1B (ENSPTRG00000019449) #12	ARPC1A (ENSPTRG00000033819) #13	MYH16 (ENSPTRG00000052047) #14	KPNA7 (ENSPTRG00000019446) #15	SMURF1 (ENSPTRG00000019444) #16	TRRAP (ENSPTRG00000019442) #17	TMEM130 (ENSPTRG00000045055) #18	NPTX2 (ENSPTRG00000019440) #19	ENSPTRG00000049708	BAIAP2L1 (ENSPTRG00000019438) #20	BRI3 (ENSPTRG00000019436) #21	TECPR1 (ENSPTRG00000028478) #22	BHLHA15 (ENSPTRG00000019434)	LMTK2 (ENSPTRG00000019433) #23	OCM2 (ENSPTRG00000019432) #24	ENSPTRG00000046532 #25	ASNS (ENSPTRG00000019429)	TAC1 (ENSPTRG00000019428)	SDHAF3 (ENSPTRG00000019427)	DLX5 (ENSPTRG00000019426)	DLX6 (ENSPTRG00000019425)	ENSPTRG00000046969	ENSPTRG00000019424	ENSPTRG00000046820	SLC25A13 (ENSPTRG00000019423)	DYNC1I1 (ENSPTRG00000019422)	PDK4 (ENSPTRG00000019421)
Chimpanzee	MODERN SPECIES	559														ENSPTRG00000043653 #20	ENSPTRG00000043928 #21	ENSPTRG00000044396 #22	ENSPTRG00000046476	ENSPTRG00000046742 #23	ENSPTRG00000043094 #24	ENSPTRG00000043462 #25	ENSPTRG00000043847
Bonobo	MODERN SPECIES	20	ENSPPAG00000042587	CPSF4 (ENSPPAG00000043355) #8	PTCD1 (ENSPPAG00000036024) #9	BUD31 (ENSPPAG00000040700) #10	PDAP1 (ENSPPAG00000031378) #11	ARPC1B (ENSPPAG00000029449) #12	ARPC1A (ENSPPAG00000032222) #13	ENSPPAG00000032160 #14	KPNA7 (ENSPPAG00000040756) #15	SMURF1 (ENSPPAG00000031727) #16	TRRAP (ENSPPAG00000036292) #17	TMEM130 (ENSPPAG00000016661) #18	ENSPPAG00000032935 #19	BAIAP2L1 (ENSPPAG00000037144) #20	ENSPPAG00000031565 #21	TECPR1 (ENSPPAG00000036532) #22	BHLHA15 (ENSPPAG00000038305)	LMTK2 (ENSPPAG00000032735) #23	ENSPPAG00000027488 #25	ASNS (ENSPPAG00000033201)	TAC1 (ENSPPAG00000033152)	SDHAF3 (ENSPPAG00000037725)	DLX5 (ENSPPAG00000031068)	ENSPPAG00000030516	ENSPPAG00000005986	ENSPPAG00000043520	ENSPPAG00000036367	SLC25A13 (ENSPPAG00000035337)	DYNC1I1 (ENSPPAG00000043387)	PDK4 (ENSPPAG00000027188)	ASB4 (ENSPPAG00000042126)
Human	MODERN SPECIES	19	CPSF4 (ENSG00000160917) #8	ATP5MF-PTCD1 (ENSG00000248919)	PTCD1 (ENSG00000106246) #9	BUD31 (ENSG00000106245) #10	PDAP1 (ENSG00000106244) #11	ARPC1B (ENSG00000130429) #12	ARPC1A (ENSG00000241685) #13	ENSG00000284292	KPNA7 (ENSG00000185467) #15	SMURF1 (ENSG00000198742) #16	TRRAP (ENSG00000196367) #17	TMEM130 (ENSG00000166448) #18	NPTX2 (ENSG00000106236) #19	BAIAP2L1 (ENSG00000006453) #20	BRI3 (ENSG00000164713) #21	TECPR1 (ENSG00000205356) #22	BHLHA15 (ENSG00000180535)	LMTK2 (ENSG00000164715) #23	OCM2 (ENSG00000135175) #24	ASNS (ENSG00000070669)	TAC1 (ENSG00000006128)	SDHAF3 (ENSG00000196636)	DLX5 (ENSG00000105880)	DLX6 (ENSG00000006377)	SEM1 (ENSG00000127922)	SLC25A13 (ENSG00000004864)	DYNC1I1 (ENSG00000158560)	PDK4 (ENSG00000004799)	ASB4 (ENSG00000005981)	PON2 (ENSG00000105854)	PON3 (ENSG00000105852)
Gorilla	MODERN SPECIES	20	ENSGGOG00000041309	BUD31 (ENSGGOG00000015119) #10	PDAP1 (ENSGGOG00000025196) #11	ARPC1B (ENSGGOG00000013186) #12	ARPC1A (ENSGGOG00000039217) #13	ENSGGOG00000036592 #13	ENSGGOG00000016797 #14	KPNA7 (ENSGGOG00000000414) #15	SMURF1 (ENSGGOG00000011481) #16	TRRAP (ENSGGOG00000002928) #17	TMEM130 (ENSGGOG00000016665) #18	NPTX2 (ENSGGOG00000014713) #19	ENSGGOG00000023648	BAIAP2L1 (ENSGGOG00000022920) #20	ENSGGOG00000009646 #21	TECPR1 (ENSGGOG00000003065) #22	LMTK2 (ENSGGOG00000003052) #23	OCM2 (ENSGGOG00000022595) #24	ENSGGOG00000038206 #25	ASNS (ENSGGOG00000005662)	TAC1 (ENSGGOG00000014091)	ENSGGOG00000014829	DLX5 (ENSGGOG00000004399)	DLX6 (ENSGGOG00000004398)	ENSGGOG00000043164	ENSGGOG00000023289	ENSGGOG00000000042	SLC25A13 (ENSGGOG00000005803)	DYNC1I1 (ENSGGOG00000000228)	PDK4 (ENSGGOG00000002467)	ASB4 (ENSGGOG00000006509)
Orangutan	MODERN SPECIES	20	ATP5MF (ENSPPYG00000017379) #7	ENSPPYG00000041797	CPSF4 (ENSPPYG00000017378) #8	PTCD1 (ENSPPYG00000017377) #9	BUD31 (ENSPPYG00000017376) #10	ENSPPYG00000017375 #11	ARPC1B (ENSPPYG00000017374) #12	ARPC1A (ENSPPYG00000025816) #13	KPNA7 (ENSPPYG00000017369) #15	SMURF1 (ENSPPYG00000017368) #16	TRRAP (ENSPPYG00000017366) #17	TMEM130 (ENSPPYG00000017365) #18	NPTX2 (ENSPPYG00000029795) #19	BAIAP2L1 (ENSPPYG00000017363) #20	ENSPPYG00000037940 #21	TECPR1 (ENSPPYG00000017362) #22	BHLHA15 (ENSPPYG00000017361)	LMTK2 (ENSPPYG00000017360) #23	ENSPPYG00000017340 #24	ZNF12 (ENSPPYG00000030303)	ZNF316 (ENSPPYG00000033506)	ZNF853 (ENSPPYG00000040545)	INTS15 (ENSPPYG00000017353)	ZDHHC4 (ENSPPYG00000017352)	GRID2IP (ENSPPYG00000017351)	KDELR2 (ENSPPYG00000017350)	DAGLB (ENSPPYG00000017349)	RAC1 (ENSPPYG00000017348)	ENSPPYG00000036565 #36	FAM220A (ENSPPYG00000017347)	CYTH3 (ENSPPYG00000017346) #35
Gibbon	MODERN SPECIES	7	ENSNLEG00000011100	PTCD1 (ENSNLEG00000011060) #9	BUD31 (ENSNLEG00000011020) #10	PDAP1 (ENSNLEG00000011017) #11	ENSNLEG00000026790 #12	ARPC1A (ENSNLEG00000010852) #13	ENSNLEG00000032444 #14	KPNA7 (ENSNLEG00000010827) #15	SMURF1 (ENSNLEG00000010717) #16	TRRAP (ENSNLEG00000027081) #17	TMEM130 (ENSNLEG00000010699) #18	ENSNLEG00000010697 #19	BAIAP2L1 (ENSNLEG00000033877) #20	ENSNLEG00000035321 #21	ENSNLEG00000012944	TECPR1 (ENSNLEG00000010642) #22	BHLHA15 (ENSNLEG00000018875)	ENSNLEG00000027958	LMTK2 (ENSNLEG00000010627) #23	ENSNLEG00000035464	ENSNLEG00000000939 #28	AIMP2 (ENSNLEG00000035742) #29	ANKRD61 (ENSNLEG00000001091) #31	EIF2AK1 (ENSNLEG00000000992) #30	USP42 (ENSNLEG00000001092) #33	CYTH3 (ENSNLEG00000001145) #35	ENSNLEG00000001188 #36	ENSNLEG00000015697	DAGLB (ENSNLEG00000015668)	KDELR2 (ENSNLEG00000015662)	GRID2IP (ENSNLEG00000015646)
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00510000046986.n.a.d #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.m #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.c #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156.c	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a.k.a.a
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00510000046986.n.a.c.b #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.m #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.c.h #25	ENSGT00940000170143	ENSGT00390000004713.c.g #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156.c	ENSGT00390000014547.c #36
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00510000046986.n.a.c.b #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.m #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.c.h #25	ENSGT00940000170143	ENSGT00390000004713.c.g #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156.c	ENSGT00390000014547.c #36
Macaca	ANCESTRAL SPECIES	3	ENSGT00510000046986.n.a.c.a.b #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.m #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.c.g #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a.k.a.a	ENSGT00940000156486	ENSGT00390000004010.a.b.a
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.m #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT01100000263539.b.a.a.a.a.a.a.a.b.b.b.a.b.b	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT01080000257579.b.b.b.a.b	ENSGT00950000183188.A.b #18	ENSGT01100000263539.b.a.a.a.a.b.a.b.b.a.d.a	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00940000167990.a	ENSGT00510000047886.a #22	ENSGT00940000158475 #23
Rhesus	MODERN SPECIES	13	PTCD1 (ENSMMUG00000030408) #9	BUD31 (ENSMMUG00000000427) #10	PDAP1 (ENSMMUG00000001460) #11	ARPC1A (ENSMMUG00000001458) #13	ENSMMUG00000056270	KPNA7 (ENSMMUG00000019445) #15	ENSMMUG00000054851	SMURF1 (ENSMMUG00000009183) #16	TRRAP (ENSMMUG00000023318) #17	ENSMMUG00000055827	TMEM130 (ENSMMUG00000012377) #18	ENSMMUG00000059873	NPTX2 (ENSMMUG00000011970) #19	BAIAP2L1 (ENSMMUG00000013276) #20	BRI3 (ENSMMUG00000049558)	TECPR1 (ENSMMUG00000015479) #22	LMTK2 (ENSMMUG00000015477) #23	ENSMMUG00000054767	ENSMMUG00000064257	OCM (ENSMMUG00000049706) #24	ENSMMUG00000007970 #25	ENSMMUG00000030422 #27	PMS2 (ENSMMUG00000030421) #28	AIMP2 (ENSMMUG00000030420) #29	ANKRD61 (ENSMMUG00000045015) #31	EIF2AK1 (ENSMMUG00000030419) #30	USP42 (ENSMMUG00000020321) #33	CYTH3 (ENSMMUG00000003167) #35	FAM220A (ENSMMUG00000014753)	RAC1 (ENSMMUG00000021075)	DAGLB (ENSMMUG00000010292)
Pig-tailed macaque	MODERN SPECIES	80	ENSMNEG00000044753 #7	CPSF4 (ENSMNEG00000032306) #8	PTCD1 (ENSMNEG00000043786) #9	BUD31 (ENSMNEG00000034239) #10	ENSMNEG00000038469 #11	ARPC1B (ENSMNEG00000032941) #12	ARPC1A (ENSMNEG00000045309) #13	ENSMNEG00000043344 #14	KPNA7 (ENSMNEG00000043325) #15	SMURF1 (ENSMNEG00000030527) #16	TRRAP (ENSMNEG00000011245) #17	TMEM130 (ENSMNEG00000034143) #18	NPTX2 (ENSMNEG00000031035) #19	BAIAP2L1 (ENSMNEG00000027564) #20	BRI3 (ENSMNEG00000000029) #21	TECPR1 (ENSMNEG00000039715) #22	BHLHA15 (ENSMNEG00000021350)	LMTK2 (ENSMNEG00000038154) #23	ENSMNEG00000036828 #24	ENSMNEG00000031130 #25	ENSMNEG00000034328 #27	PMS2 (ENSMNEG00000039965) #28	AIMP2 (ENSMNEG00000030339) #29	EIF2AK1 (ENSMNEG00000033109) #30	USP42 (ENSMNEG00000038408) #33	CYTH3 (ENSMNEG00000031782) #35	ENSMNEG00000041902 #36	RAC1 (ENSMNEG00000039059)	DAGLB (ENSMNEG00000042196)	KDELR2 (ENSMNEG00000045050)	GRID2IP (ENSMNEG00000036441)
Cercopithecinae_b	ANCESTRAL SPECIES	36	ENSGT00390000002944.e.b	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.m #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.c.h #25	ENSGT00390000004713.c.g #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156.c	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a.k.b
Cercopithecinae_d	ANCESTRAL SPECIES	75	ENSGT00390000002944.e.b	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.m #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.c.g #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a.k.b	ENSGT00940000156486	ENSGT00390000004010.a.b.a
Sooty mangabey	MODERN SPECIES	630	ENSCATG00000030778	CPSF4 (ENSCATG00000038440) #8	PTCD1 (ENSCATG00000040859) #9	BUD31 (ENSCATG00000042456) #10	ENSCATG00000037918 #11	ARPC1B (ENSCATG00000037261) #12	ARPC1A (ENSCATG00000034511) #13	ENSCATG00000045237 #14	KPNA7 (ENSCATG00000016098) #15	SMURF1 (ENSCATG00000019164) #16	TRRAP (ENSCATG00000032049) #17	TMEM130 (ENSCATG00000034901) #18	NPTX2 (ENSCATG00000035885) #19	BAIAP2L1 (ENSCATG00000033297) #20	BRI3 (ENSCATG00000039656) #21	TECPR1 (ENSCATG00000043836) #22	BHLHA15 (ENSCATG00000021737)	ENSCATG00000017491	LMTK2 (ENSCATG00000037130) #23	ENSCATG00000042940 #24	ENSCATG00000011606 #25	ENSCATG00000034408 #27	ZNF12 (ENSCATG00000036359)	ZNF316 (ENSCATG00000039607)	ZNF853 (ENSCATG00000034604)	INTS15 (ENSCATG00000030108)	ENSCATG00000028674	ZDHHC4 (ENSCATG00000025695)	GRID2IP (ENSCATG00000034128)	KDELR2 (ENSCATG00000036365)	DAGLB (ENSCATG00000033180)
Drill	MODERN SPECIES	930	CPSF4 (ENSMLEG00000034721) #8	PTCD1 (ENSMLEG00000031179) #9	BUD31 (ENSMLEG00000035118) #10	ENSMLEG00000029041 #11	ENSMLEG00000031168 #12	ENSMLEG00000041405 #12	ARPC1A (ENSMLEG00000031614) #13	ENSMLEG00000036464 #14	KPNA7 (ENSMLEG00000041680) #15	SMURF1 (ENSMLEG00000041278) #16	TRRAP (ENSMLEG00000020926) #17	TMEM130 (ENSMLEG00000024016) #18	NPTX2 (ENSMLEG00000034636) #19	BAIAP2L1 (ENSMLEG00000030011) #20	BRI3 (ENSMLEG00000038264) #21	TECPR1 (ENSMLEG00000033546) #22	BHLHA15 (ENSMLEG00000005175)	LMTK2 (ENSMLEG00000033242) #23	ENSMLEG00000037262 #24	ENSMLEG00000030378 #25	ENSMLEG00000030927 #27	ENSMLEG00000039444	ZNF12 (ENSMLEG00000033128)	ENSMLEG00000037708	INTS15 (ENSMLEG00000030493)	ENSMLEG00000042420	ZDHHC4 (ENSMLEG00000014952)
Olive baboon	MODERN SPECIES	14	ENSPANG00000009919	ENSPANG00000030778 #7	CPSF4 (ENSPANG00000023123) #8	PTCD1 (ENSPANG00000016730) #9	BUD31 (ENSPANG00000006779) #10	ENSPANG00000025132 #11	ARPC1B (ENSPANG00000023245) #12	ARPC1A (ENSPANG00000032757) #13	KPNA7 (ENSPANG00000021499) #15	SMURF1 (ENSPANG00000023126) #16	TRRAP (ENSPANG00000006931) #17	TMEM130 (ENSPANG00000009013) #18	NPTX2 (ENSPANG00000009445) #19	BAIAP2L1 (ENSPANG00000024563) #20	BRI3 (ENSPANG00000015667) #21	TECPR1 (ENSPANG00000020539) #22	BHLHA15 (ENSPANG00000010823)	LMTK2 (ENSPANG00000023289) #23	ENSPANG00000033390 #24	ENSPANG00000035903	ENSPANG00000008247 #27	ENSPANG00000051135	ENSPANG00000009446 #24	ENSPANG00000018760 #25	PMS2 (ENSPANG00000000879) #28	AIMP2 (ENSPANG00000010693) #29	EIF2AK1 (ENSPANG00000004605) #30	ANKRD61 (ENSPANG00000009970) #31	USP42 (ENSPANG00000000532) #33	CYTH3 (ENSPANG00000015584) #35	MMD2 (ENSPANG00000015670)
Vervet Monkey	MODERN SPECIES	20	ZKSCAN5 (ENSCSAG00000017802)	ZNF394 (ENSCSAG00000017799)	ZNF789 (ENSCSAG00000017796)	CPSF4 (ENSCSAG00000017795) #8	PTCD1 (ENSCSAG00000017794) #9	BUD31 (ENSCSAG00000017793) #10	ENSCSAG00000017792 #11	ARPC1A (ENSCSAG00000017788) #13	KPNA7 (ENSCSAG00000017780) #15	SMURF1 (ENSCSAG00000017771) #16	TRRAP (ENSCSAG00000017767) #17	TMEM130 (ENSCSAG00000017759) #18	NPTX2 (ENSCSAG00000017758) #19	BAIAP2L1 (ENSCSAG00000017756) #20	BRI3 (ENSCSAG00000017754) #21	TECPR1 (ENSCSAG00000017751) #22	BHLHA15 (ENSCSAG00000019492)	LMTK2 (ENSCSAG00000017746) #23	PMS2 (ENSCSAG00000017741) #28	AIMP2 (ENSCSAG00000017739) #29	EIF2AK1 (ENSCSAG00000017735) #30	ANKRD61 (ENSCSAG00000017721) #31	USP42 (ENSCSAG00000017719) #33	CYTH3 (ENSCSAG00000017714) #35	FAM220A (ENSCSAG00000019493)	RAC1 (ENSCSAG00000017712)	DAGLB (ENSCSAG00000017706)	KDELR2 (ENSCSAG00000017700)	GRID2IP (ENSCSAG00000017697)	ZDHHC4 (ENSCSAG00000017695)	INTS15 (ENSCSAG00000017692)
Rhinopithecus	ANCESTRAL SPECIES	46	ENSGT00510000046986.n.a.d.d #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.m #11	ENSGT00950000183183.b.b.`b #12	ENSGT00950000183183.b.a.y.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00910000148510	ENSGT00390000017980.hb
Golden snub-nosed monkey	MODERN SPECIES	760													NPTX2 (ENSRROG00000037440) #19	BAIAP2L1 (ENSRROG00000035829) #20	BRI3 (ENSRROG00000030198) #21	TECPR1 (ENSRROG00000035128) #22	BHLHA15 (ENSRROG00000042722)	LMTK2 (ENSRROG00000039527) #23	ENSRROG00000030165	ENSRROG00000035764
Black snub-nosed monkey	MODERN SPECIES	2216														BAIAP2L1 (ENSRBIG00000030192) #20	BRI3 (ENSRBIG00000040061) #21	TECPR1 (ENSRBIG00000032301) #22	BHLHA15 (ENSRBIG00000034788)	ENSRBIG00000041919	ENSRBIG00000020659	LMTK2 (ENSRBIG00000033161) #23
Tarsier	MODERN SPECIES	7056											SMURF1 (ENSTSYG00000010619) #16	TRRAP (ENSTSYG00000002471) #17	TMEM130 (ENSTSYG00000030925) #18	NPTX2 (ENSTSYG00000004435) #19	BAIAP2L1 (ENSTSYG00000012150) #20	TECPR1 (ENSTSYG00000035790) #22	LMTK2 (ENSTSYG00000004417) #23	ENSTSYG00000009390 #24	CCZ1 (ENSTSYG00000009426) #25	ENSTSYG00000014172 #27	PMS2 (ENSTSYG00000002501) #28	AIMP2 (ENSTSYG00000002508) #29	EIF2AK1 (ENSTSYG00000003197) #30	ANKRD61 (ENSTSYG00000025929) #31	ENSTSYG00000036182	ENSTSYG00000028563 #33	CYTH3 (ENSTSYG00000005125) #35
Strepsirrhini	ANCESTRAL SPECIES	14	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139
Lemuriformes	ANCESTRAL SPECIES	6	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.s.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b.db #33	ENSGT00940000154596.b.eb #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36
Lemuriformes_a	ANCESTRAL SPECIES	16	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.s.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b.db #33	ENSGT00940000154596.b.eb #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36
Greater bamboo lemur	MODERN SPECIES	522	ATP5MF (ENSPSMG00000004717) #7	CPSF4 (ENSPSMG00000004691) #8	PTCD1 (ENSPSMG00000004631) #9	BUD31 (ENSPSMG00000004621) #10	PDAP1 (ENSPSMG00000004603) #11	ARPC1B (ENSPSMG00000004575) #12	ARPC1A (ENSPSMG00000004536) #13	KPNA7 (ENSPSMG00000004499) #15	SMURF1 (ENSPSMG00000004395) #16	TRRAP (ENSPSMG00000004004) #17	TMEM130 (ENSPSMG00000003560) #18	ENSPSMG00000003514	NPTX2 (ENSPSMG00000003510) #19	BAIAP2L1 (ENSPSMG00000003502) #20	BRI3 (ENSPSMG00000003477) #21	TECPR1 (ENSPSMG00000003451) #22	BHLHA15 (ENSPSMG00000003426)	LMTK2 (ENSPSMG00000003391) #23	ENSPSMG00000003348 #24	ENSPSMG00000003259 #25	ENSPSMG00000003157	ENSPSMG00000003153 #27	PMS2 (ENSPSMG00000002935) #28	AIMP2 (ENSPSMG00000002869) #29	ANKRD61 (ENSPSMG00000002858) #31	EIF2AK1 (ENSPSMG00000002851) #30	ENSPSMG00000002814 #33	CYTH3 (ENSPSMG00000002677) #35	FAM220A (ENSPSMG00000002627)	ENSPSMG00000002622 #36	ENSPSMG00000002616
Coquerels sifaka	MODERN SPECIES	155	ATP5MF (ENSPCOG00000027298) #7	CPSF4 (ENSPCOG00000012771) #8	PTCD1 (ENSPCOG00000018596) #9	BUD31 (ENSPCOG00000016931) #10	PDAP1 (ENSPCOG00000024638) #11	ARPC1B (ENSPCOG00000010552) #12	ENSPCOG00000013572 #13	ENSPCOG00000017933 #14	KPNA7 (ENSPCOG00000026168) #15	SMURF1 (ENSPCOG00000023089) #16	TRRAP (ENSPCOG00000021914) #17	TMEM130 (ENSPCOG00000025459) #18	NPTX2 (ENSPCOG00000024897) #19	BAIAP2L1 (ENSPCOG00000022611) #20	BRI3 (ENSPCOG00000000280) #21	TECPR1 (ENSPCOG00000015825) #22	LMTK2 (ENSPCOG00000025104) #23	ENSPCOG00000017766 #24	ENSPCOG00000025277 #25	ENSPCOG00000024104 #27	PMS2 (ENSPCOG00000019462) #28	AIMP2 (ENSPCOG00000024068) #29	EIF2AK1 (ENSPCOG00000024245) #30	ANKRD61 (ENSPCOG00000015357) #31	USP42 (ENSPCOG00000018641) #33	CYTH3 (ENSPCOG00000024782) #35	ENSPCOG00000024195 #36	RAC1 (ENSPCOG00000020411)	DAGLB (ENSPCOG00000001509)	KDELR2 (ENSPCOG00000019889)	GRID2IP (ENSPCOG00000025659)
Mouse lemur	MODERN SPECIES	8	ENSMICG00000044867 #7	CPSF4 (ENSMICG00000017429) #8	PTCD1 (ENSMICG00000017428) #9	ENSMICG00000017426 #10	PDAP1 (ENSMICG00000017425) #11	ARPC1B (ENSMICG00000017424) #12	ENSMICG00000017423 #13	ENSMICG00000017421 #14	KPNA7 (ENSMICG00000017420) #15	SMURF1 (ENSMICG00000042244) #16	TRRAP (ENSMICG00000002909) #17	TMEM130 (ENSMICG00000002904) #18	NPTX2 (ENSMICG00000002901) #19	BAIAP2L1 (ENSMICG00000002891) #20	ENSMICG00000043223 #21	TECPR1 (ENSMICG00000002874) #22	BHLHA15 (ENSMICG00000036615)	LMTK2 (ENSMICG00000002866) #23	ENSMICG00000046401	ENSMICG00000042503 #24	ENSMICG00000012751 #25	ENSMICG00000012768 #27	PMS2 (ENSMICG00000012794) #28	AIMP2 (ENSMICG00000012810) #29	ANKRD61 (ENSMICG00000012853) #31	EIF2AK1 (ENSMICG00000012815) #30	ENSMICG00000044799 #33	ENSMICG00000037327 #33	CYTH3 (ENSMICG00000004355) #35	ENSMICG00000004365 #36	RAC1 (ENSMICG00000047004)
Bushbaby	MODERN SPECIES	257	ENSOGAG00000032002	CPSF4 (ENSOGAG00000010884) #8	PTCD1 (ENSOGAG00000010877) #9	BUD31 (ENSOGAG00000010875) #10	ENSOGAG00000010874 #11	ARPC1B (ENSOGAG00000010872) #12	ARPC1A (ENSOGAG00000010870) #13	ENSOGAG00000028575 #14	ENSOGAG00000031106 #15	SMURF1 (ENSOGAG00000009903) #16	TRRAP (ENSOGAG00000000643) #17	TMEM130 (ENSOGAG00000000642) #18	NPTX2 (ENSOGAG00000000640) #19	BAIAP2L1 (ENSOGAG00000000639) #20	ENSOGAG00000000638 #21	TECPR1 (ENSOGAG00000010108) #22	BHLHA15 (ENSOGAG00000010106)	LMTK2 (ENSOGAG00000010100) #23	ENSOGAG00000007674 #24	ENSOGAG00000027379 #25	ENSOGAG00000001126 #27	PMS2 (ENSOGAG00000001128) #28	AIMP2 (ENSOGAG00000001129) #29	EIF2AK1 (ENSOGAG00000001130) #30	ANKRD61 (ENSOGAG00000024824) #31	USP42 (ENSOGAG00000003758) #33	CYTH3 (ENSOGAG00000003763) #35	ENSOGAG00000026127	MANEA (ENSOGAG00000011468)	ENSOGAG00000032263
Euarchontoglires_A	ANCESTRAL SPECIES	12	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a
Glires	ANCESTRAL SPECIES	11	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a
Rodentia	ANCESTRAL SPECIES	11	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a
Rodentia_B	ANCESTRAL SPECIES	29	ENSGT00940000162347	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Myomorpha	ANCESTRAL SPECIES	31	ENSGT00940000162347	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Muroidea	ANCESTRAL SPECIES	51	ENSGT00940000162347	ENSGT00510000046986.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Muroidea_A	ANCESTRAL SPECIES	27	ENSGT00940000162347	ENSGT00510000046986.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Murinae	ANCESTRAL SPECIES	28	ENSGT00940000162347	ENSGT00510000046986.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Mus	ANCESTRAL SPECIES	17	ENSGT00940000162347	ENSGT00510000046986.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00940000153500.a.a	ENSGT00940000156486	ENSGT00390000004010.a.b.a
Mus_A	ANCESTRAL SPECIES	6	ENSGT00510000046986.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b.w #12	ENSGT00950000183183.b.a #13	ENSGT00940000156012.q	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00940000153500.a.a	ENSGT00940000156486	ENSGT00390000004010.a.b.a
Mus_B	ANCESTRAL SPECIES	4	ENSGT00510000046986.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b.w #12	ENSGT00950000183183.b.a #13	ENSGT00940000156012.q	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156.e	ENSGT00940000153500.a.a	ENSGT00940000156486	ENSGT00390000004010.a.b.a
Mus_C	ANCESTRAL SPECIES	4	ENSGT00510000046986.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b.w #12	ENSGT00950000183183.b.a #13	ENSGT00940000156012.q	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00940000153500.a.a	ENSGT00940000156486	ENSGT00390000004010.a.b.a	ENSGT00940000157625.b
Steppe mouse	MODERN SPECIES	3370	Ptcd1 (ENSMSIG00000028962) #9	Bud31 (ENSMSIG00000028973) #10	Pdap1 (ENSMSIG00000028982) #11	Arpc1b (ENSMSIG00000028992) #12	ENSMSIG00000029006	Arpc1a (ENSMSIG00000029008) #13	ENSMSIG00000029019	ENSMSIG00000029026 #15	Smurf1 (ENSMSIG00000029028) #16	Trrap (ENSMSIG00000029078) #17	Tmem130 (ENSMSIG00000029228) #18	Nptx2 (ENSMSIG00000029233) #19	ENSMSIG00000029239	Baiap2l1 (ENSMSIG00000029242) #20	ENSMSIG00000029259	Tecpr1 (ENSMSIG00000029264) #22	Bhlha15 (ENSMSIG00000029278)	Lmtk2 (ENSMSIG00000029281) #23	Ocm (ENSMSIG00000029288) #24	ENSMSIG00000029291 #25	Rsph10b (ENSMSIG00000029304) #27	Pms2 (ENSMSIG00000029318) #28	Aimp2 (ENSMSIG00000029346) #29	Eif2ak1 (ENSMSIG00000029351) #30	Ankrd61 (ENSMSIG00000029390) #31	Usp42 (ENSMSIG00000029396) #33	Cyth3 (ENSMSIG00000029403) #35	ENSMSIG00000029411	ENSMSIG00000029413	ENSMSIG00000029415 #36	ENSMSIG00000029417
spretus	MODERN SPECIES	14	Zkscan14 (MGP_SPRETEiJ_G0029015)	Atp5j2 (MGP_SPRETEiJ_G0029014) #7	Cpsf4 (MGP_SPRETEiJ_G0029013) #8	Ptcd1 (MGP_SPRETEiJ_G0029012) #9	Bud31 (MGP_SPRETEiJ_G0029011) #10	Pdap1 (MGP_SPRETEiJ_G0029010) #11	MGP_SPRETEiJ_G0029009 #12	Arpc1a (MGP_SPRETEiJ_G0029008) #13	Kpna7 (MGP_SPRETEiJ_G0029007) #15	Smurf1 (MGP_SPRETEiJ_G0029006) #16	Trrap (MGP_SPRETEiJ_G0029005) #17	Tmem130 (MGP_SPRETEiJ_G0029004) #18	Nptx2 (MGP_SPRETEiJ_G0029003) #19	Baiap2l1 (MGP_SPRETEiJ_G0029002) #20	Bri3 (MGP_SPRETEiJ_G0029001) #21	Tecpr1 (MGP_SPRETEiJ_G0029000) #22	Bhlha15 (MGP_SPRETEiJ_G0028999)	Lmtk2 (MGP_SPRETEiJ_G0028998) #23	Ocm (MGP_SPRETEiJ_G0028997) #24	Ccz1 (MGP_SPRETEiJ_G0028996) #25	Rsph10b (MGP_SPRETEiJ_G0028995) #27	MGP_SPRETEiJ_G0028994 #28	Pms2 (MGP_SPRETEiJ_G0028993) #28	Aimp2 (MGP_SPRETEiJ_G0028992) #29	MGP_SPRETEiJ_G0028991 #31	Eif2ak1 (MGP_SPRETEiJ_G0028990) #30	Usp42 (MGP_SPRETEiJ_G0028989) #33	Cyth3 (MGP_SPRETEiJ_G0028988) #35	MGP_SPRETEiJ_G0028987	Rac1 (MGP_SPRETEiJ_G0028986)	Daglb (MGP_SPRETEiJ_G0028985)
Mouse	MODERN SPECIES	14	Cpsf4 (ENSMUSG00000029625) #8	Ptcd1 (ENSMUSG00000029624) #9	Bud31 (ENSMUSG00000038722) #10	Pdap1 (ENSMUSG00000029623) #11	Arpc1b (ENSMUSG00000029622) #12	Arpc1a (ENSMUSG00000029621) #13	1700018F24Rik (ENSMUSG00000029620)	Gm4871 (ENSMUSG00000061707)	Kpna7 (ENSMUSG00000038770) #15	Smurf1 (ENSMUSG00000038780) #16	Trrap (ENSMUSG00000045482) #17	Tmem130 (ENSMUSG00000043388) #18	Nptx2 (ENSMUSG00000059991) #19	Baiap2l1 (ENSMUSG00000038859) #20	Bri3 (ENSMUSG00000047843) #21	Tecpr1 (ENSMUSG00000066621) #22	Bhlha15 (ENSMUSG00000052271)	Lmtk2 (ENSMUSG00000038970) #23	Ocm (ENSMUSG00000029618) #24	Ccz1 (ENSMUSG00000029617) #25	Rsph10b (ENSMUSG00000075569) #27	Pms2 (ENSMUSG00000079109) #28	Aimp2 (ENSMUSG00000029610) #29	Ankrd61 (ENSMUSG00000029607) #31	Eif2ak1 (ENSMUSG00000029613) #30	Usp42 (ENSMUSG00000051306) #33	Cyth3 (ENSMUSG00000018001) #35	Fam220a (ENSMUSG00000083012)	Fam220a (ENSMUSG00000118332)	Rac1 (ENSMUSG00000001847)	Daglb (ENSMUSG00000039206)
Ryukyu mouse	MODERN SPECIES	14	Cpsf4 (MGP_CAROLIEiJ_G0028012) #8	Ptcd1 (MGP_CAROLIEiJ_G0028011) #9	Bud31 (MGP_CAROLIEiJ_G0028010) #10	Pdap1 (MGP_CAROLIEiJ_G0028009) #11	Arpc1b (MGP_CAROLIEiJ_G0028008) #12	Arpc1a (MGP_CAROLIEiJ_G0028007) #13	MGP_CAROLIEiJ_G0028006	MGP_CAROLIEiJ_G0028005	Kpna7 (MGP_CAROLIEiJ_G0028004) #15	Smurf1 (MGP_CAROLIEiJ_G0028003) #16	Trrap (MGP_CAROLIEiJ_G0028002) #17	Tmem130 (MGP_CAROLIEiJ_G0028001) #18	Nptx2 (MGP_CAROLIEiJ_G0028000) #19	Baiap2l1 (MGP_CAROLIEiJ_G0027999) #20	Bri3 (MGP_CAROLIEiJ_G0027998) #21	Tecpr1 (MGP_CAROLIEiJ_G0027997) #22	Bhlha15 (MGP_CAROLIEiJ_G0027996)	Lmtk2 (MGP_CAROLIEiJ_G0027995) #23	Ocm (MGP_CAROLIEiJ_G0027994) #24	Fpr-rs3 (MGP_CAROLIEiJ_G0027993)	Ccz1 (MGP_CAROLIEiJ_G0027992) #25	Rsph10b (MGP_CAROLIEiJ_G0027991) #27	MGP_CAROLIEiJ_G0027990 #28	Pms2 (MGP_CAROLIEiJ_G0027989) #28	Aimp2 (MGP_CAROLIEiJ_G0027988) #29	Ankrd61 (MGP_CAROLIEiJ_G0027987) #31	Eif2ak1 (MGP_CAROLIEiJ_G0027986) #30	Usp42 (MGP_CAROLIEiJ_G0027985) #33	Cyth3 (MGP_CAROLIEiJ_G0027984) #35	MGP_CAROLIEiJ_G0027983	Rac1 (MGP_CAROLIEiJ_G0027982)
Shrew mouse	MODERN SPECIES	15	Zkscan14 (MGP_PahariEiJ_G0024583)	Atp5j2 (MGP_PahariEiJ_G0024582) #7	Cpsf4 (MGP_PahariEiJ_G0024581) #8	Ptcd1 (MGP_PahariEiJ_G0024580) #9	Bud31 (MGP_PahariEiJ_G0024579) #10	Pdap1 (MGP_PahariEiJ_G0024578) #11	Arpc1b (MGP_PahariEiJ_G0024577) #12	MGP_PahariEiJ_G0024576 #13	Kpna7 (MGP_PahariEiJ_G0024575) #15	Smurf1 (MGP_PahariEiJ_G0024574) #16	Trrap (MGP_PahariEiJ_G0024573) #17	Tmem130 (MGP_PahariEiJ_G0024572) #18	Nptx2 (MGP_PahariEiJ_G0024571) #19	Baiap2l1 (MGP_PahariEiJ_G0024570) #20	Bri3 (MGP_PahariEiJ_G0024569) #21	Tecpr1 (MGP_PahariEiJ_G0024568) #22	Bhlha15 (MGP_PahariEiJ_G0024567)	Lmtk2 (MGP_PahariEiJ_G0024566) #23	Ocm (MGP_PahariEiJ_G0024565) #24	Ccz1 (MGP_PahariEiJ_G0024564) #25	Rsph10b (MGP_PahariEiJ_G0024563) #27	MGP_PahariEiJ_G0024562	Pms2 (MGP_PahariEiJ_G0024561) #28	Aimp2 (MGP_PahariEiJ_G0024560) #29	Ankrd61 (MGP_PahariEiJ_G0024559) #31	Eif2ak1 (MGP_PahariEiJ_G0024558) #30	Usp42 (MGP_PahariEiJ_G0024557) #33	Cyth3 (MGP_PahariEiJ_G0024556) #35	MGP_PahariEiJ_G0024555	Rac1 (MGP_PahariEiJ_G0024554)	Daglb (MGP_PahariEiJ_G0024553)
Rat	MODERN SPECIES	3	Cpsf4 (ENSRNOG00000000985) #8	Ptcd1 (ENSRNOG00000000987) #9	Bud31 (ENSRNOG00000000989) #10	Pdap1 (ENSRNOG00000000990) #11	Arpc1b (ENSRNOG00000000991) #12	Arpc1a (ENSRNOG00000000996) #13	Kpna7 (ENSRNOG00000042296) #15	Smurf1 (ENSRNOG00000000999) #16	Trrap (ENSRNOG00000025244) #17	Tmem130 (ENSRNOG00000025235) #18	Nptx2 (ENSRNOG00000001006) #19	LOC100360200 (ENSRNOG00000025217) #8	RGD1565131 (ENSRNOG00000025212)	Baiap2l1 (ENSRNOG00000001007) #20	Bri3 (ENSRNOG00000001009) #21	Tecpr1 (ENSRNOG00000001010) #22	Bhlha15 (ENSRNOG00000025164)	Lmtk2 (ENSRNOG00000025155) #23	Ocm (ENSRNOG00000001031) #24	Ccz1b (ENSRNOG00000001032) #25	Rsph10b (ENSRNOG00000001036) #27	Pms2 (ENSRNOG00000001040) #28	Aimp2 (ENSRNOG00000001044) #29	Eif2ak1 (ENSRNOG00000001050) #30	Ankrd61 (ENSRNOG00000001048) #31	Usp42 (ENSRNOG00000001059) #33	Cyth3 (ENSRNOG00000001065) #35	Fam220a (ENSRNOG00000024605)	ENSRNOG00000065731	Rac1 (ENSRNOG00000001068)	Daglb (ENSRNOG00000001079)
Cricetidae	ANCESTRAL SPECIES	27	ENSGT00940000162347	ENSGT00510000046986.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.g #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Cricetidae_B	ANCESTRAL SPECIES	46	ENSGT00940000162347	ENSGT00510000046986.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.g #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Prairie vole	MODERN SPECIES	110	ENSMOCG00000016192	Cpsf4 (ENSMOCG00000014901) #8	Atp5j2 (ENSMOCG00000003786) #7	Zkscan5 (ENSMOCG00000011909)	Zfp655 (ENSMOCG00000019962)	Pdap1 (ENSMOCG00000015800) #11	Arpc1b (ENSMOCG00000010471) #12	Arpc1a (ENSMOCG00000020844) #13	Kpna7 (ENSMOCG00000012853) #15	Smurf1 (ENSMOCG00000010176) #16	Trrap (ENSMOCG00000000272) #17	Tmem130 (ENSMOCG00000015764) #18	Nptx2 (ENSMOCG00000011501) #19	Baiap2l1 (ENSMOCG00000002763) #20	Bri3 (ENSMOCG00000007653) #21	Tecpr1 (ENSMOCG00000021771) #22	Lmtk2 (ENSMOCG00000019505) #23	Ocm (ENSMOCG00000005057) #24	Ccz1 (ENSMOCG00000018777) #25	Rsph10b (ENSMOCG00000018506) #27	ENSMOCG00000010177 #28	Aimp2 (ENSMOCG00000014024) #29	Ankrd61 (ENSMOCG00000005764) #31	Eif2ak1 (ENSMOCG00000006374) #30	Usp42 (ENSMOCG00000012009) #33	Cyth3 (ENSMOCG00000000807) #35	ENSMOCG00000019877	ENSMOCG00000013507 #36	Rac1 (ENSMOCG00000016374)	Daglb (ENSMOCG00000000178)	Kdelr2 (ENSMOCG00000013926)
Northern American deer mouse	MODERN SPECIES	15	Atp5j2 (ENSPEMG00000013672) #7	Cpsf4 (ENSPEMG00000004508) #8	Ptcd1 (ENSPEMG00000013736) #9	Bud31 (ENSPEMG00000010947) #10	ENSPEMG00000015747 #11	Arpc1b (ENSPEMG00000017147) #12	Arpc1a (ENSPEMG00000013996) #13	Kpna7 (ENSPEMG00000017218) #15	Smurf1 (ENSPEMG00000004784) #16	Trrap (ENSPEMG00000007905) #17	Tmem130 (ENSPEMG00000017312) #18	ENSPEMG00000030777	Nptx2 (ENSPEMG00000004530) #19	Baiap2l1 (ENSPEMG00000016921) #20	Bri3 (ENSPEMG00000009259) #21	Tecpr1 (ENSPEMG00000002374) #22	Bhlha15 (ENSPEMG00000009777)	Lmtk2 (ENSPEMG00000002227) #23	Ocm (ENSPEMG00000023404) #24	Ccz1 (ENSPEMG00000007600) #25	Rsph10b (ENSPEMG00000017010) #27	Pms2 (ENSPEMG00000009009) #28	Aimp2 (ENSPEMG00000023504) #29	Ankrd61 (ENSPEMG00000023381) #31	Eif2ak1 (ENSPEMG00000023964) #30	Usp42 (ENSPEMG00000023210) #33	Cyth3 (ENSPEMG00000023607) #35	ENSPEMG00000024425	ENSPEMG00000024276	ENSPEMG00000028777 #36	ENSPEMG00000024532
Cricetinae	ANCESTRAL SPECIES	19	ENSGT00940000162347	ENSGT00510000046986.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713.g #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a	ENSGT00940000156486
Golden Hamster	MODERN SPECIES	712	Atp5j2 (ENSMAUG00000018419) #7	Cpsf4 (ENSMAUG00000021253) #8	ENSMAUG00000011008	Bud31 (ENSMAUG00000016405) #10	Pdap1 (ENSMAUG00000011742) #11	ENSMAUG00000003299 #12	ENSMAUG00000014235 #13	Kpna7 (ENSMAUG00000019165) #15	Smurf1 (ENSMAUG00000000511) #16	Trrap (ENSMAUG00000015855) #17	Tmem130 (ENSMAUG00000020273) #18	ENSMAUG00000000660	Nptx2 (ENSMAUG00000017629) #19	Baiap2l1 (ENSMAUG00000008280) #20	Bri3 (ENSMAUG00000000701) #21	Tecpr1 (ENSMAUG00000008072) #22	Lmtk2 (ENSMAUG00000014353) #23	Ocm (ENSMAUG00000016041) #24	Ccz1 (ENSMAUG00000004705) #25	ENSMAUG00000011345 #27	ENSMAUG00000014015 #28	Aimp2 (ENSMAUG00000008325) #29	Eif2ak1 (ENSMAUG00000020353) #30	Ankrd61 (ENSMAUG00000007269) #31	Usp42 (ENSMAUG00000014275) #33	Cyth3 (ENSMAUG00000022079) #35	ENSMAUG00000016388	ENSMAUG00000004039 #36	Rac1 (ENSMAUG00000017557)	Daglb (ENSMAUG00000020489)	Kdelr2 (ENSMAUG00000019623)
Chinese hamster chok1gshd	MODERN SPECIES	130	Cpsf4 (ENSCGRG00001024184) #8	Ptcd1 (ENSCGRG00001023686) #9	Bud31 (ENSCGRG00001012044) #10	Pdap1 (ENSCGRG00001016829) #11	ENSCGRG00001021035 #12	ENSCGRG00001021831 #13	Kpna7 (ENSCGRG00001007501) #15	Smurf1 (ENSCGRG00001020132) #16	Trrap (ENSCGRG00001015326) #17	ENSCGRG00001014941	Tmem130 (ENSCGRG00001017171) #18	Nptx2 (ENSCGRG00001001038) #19	ENSCGRG00001012810	Baiap2l1 (ENSCGRG00001018597) #20	Bri3 (ENSCGRG00001003030) #21	Tecpr1 (ENSCGRG00001010075) #22	Bhlha15 (ENSCGRG00001003090)	Lmtk2 (ENSCGRG00001005742) #23	Ocm (ENSCGRG00001020230) #24	Ccz1 (ENSCGRG00001021911) #25	Rsph10b (ENSCGRG00001001878) #27	Pms2 (ENSCGRG00001007988) #28	AIMP2 (ENSCGRG00001017144) #29	Eif2ak1 (ENSCGRG00001018205) #30	Ankrd61 (ENSCGRG00001021200) #31	Usp42 (ENSCGRG00001024720) #33	Cyth3 (ENSCGRG00001002265) #35	ENSCGRG00001022741	ENSCGRG00001016103 #36	Rac1 (ENSCGRG00001014453)	Daglb (ENSCGRG00001016453)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1850	ENSNGAG00000018916 #7	Cpsf4 (ENSNGAG00000001567) #8	ENSNGAG00000015871	ENSNGAG00000002694 #10	Pdap1 (ENSNGAG00000017370) #11	Arpc1b (ENSNGAG00000015329) #12	ENSNGAG00000018383 #13	Kpna7 (ENSNGAG00000021193) #15	Smurf1 (ENSNGAG00000008962) #16	Trrap (ENSNGAG00000022892) #17	Tmem130 (ENSNGAG00000017786) #18	Nptx2 (ENSNGAG00000013356) #19	ENSNGAG00000014139	Baiap2l1 (ENSNGAG00000018325) #20	Bri3 (ENSNGAG00000013902) #21	Tecpr1 (ENSNGAG00000013589) #22	Bhlha15 (ENSNGAG00000011836)	Lmtk2 (ENSNGAG00000012019) #23	Ocm (ENSNGAG00000008617) #24	Ccz1 (ENSNGAG00000004053) #25	Rsph10b (ENSNGAG00000023731) #27	ENSNGAG00000010571 #28	Aimp2 (ENSNGAG00000019038) #29	Ankrd61 (ENSNGAG00000017533) #31	Eif2ak1 (ENSNGAG00000022444) #30	Usp42 (ENSNGAG00000007453) #33	Cyth3 (ENSNGAG00000019742) #35	ENSNGAG00000024023 #36	ENSNGAG00000022224	Rac1 (ENSNGAG00000011813)	Daglb (ENSNGAG00000022378)
Lesser Egyptian jerboa	MODERN SPECIES	130	Zfand2a (ENSJJAG00000020639)	Uncx (ENSJJAG00000013064)	Micall2 (ENSJJAG00000009752)	ENSJJAG00000007745	ENSJJAG00000015541	Mafk (ENSJJAG00000021515)	Tmem184a (ENSJJAG00000023761)	Psmg3 (ENSJJAG00000022933)	Mad1l1 (ENSJJAG00000023227)	Mrm2 (ENSJJAG00000012625)	Nudt1 (ENSJJAG00000018201)	Snx8 (ENSJJAG00000019543)	Nptx2 (ENSJJAG00000011310) #19	Baiap2l1 (ENSJJAG00000010366) #20	Bri3 (ENSJJAG00000022483) #21	Tecpr1 (ENSJJAG00000013577) #22	Lmtk2 (ENSJJAG00000013256) #23	Ocm (ENSJJAG00000018779) #24	Ccz1 (ENSJJAG00000009367) #25	ENSJJAG00000019007 #28	Aimp2 (ENSJJAG00000023308) #29	Eif2ak1 (ENSJJAG00000007006) #30	Ankrd61 (ENSJJAG00000018483) #31	ENSJJAG00000016570 #33	Cyth3 (ENSJJAG00000018590) #35	ENSJJAG00000011580	Daglb (ENSJJAG00000013208)	Kdelr2 (ENSJJAG00000009130)	Grid2ip (ENSJJAG00000023779)	Zdhhc4 (ENSJJAG00000004494)	Ints15 (ENSJJAG00000021512)
Kangaroo rat	MODERN SPECIES	387	Zkscan14 (ENSDORG00000006843)	Atp5j2 (ENSDORG00000000743) #7	Cpsf4 (ENSDORG00000000742) #8	Ptcd1 (ENSDORG00000000740) #9	ENSDORG00000000739 #10	Pdap1 (ENSDORG00000000738) #11	Arpc1b (ENSDORG00000000737) #12	ENSDORG00000016059 #13	Kpna7 (ENSDORG00000001481) #15	Smurf1 (ENSDORG00000001289) #16	Trrap (ENSDORG00000016733) #17	Tmem130 (ENSDORG00000008927) #18	Nptx2 (ENSDORG00000002048) #19	Baiap2l1 (ENSDORG00000007704) #20	ENSDORG00000027487	Tecpr1 (ENSDORG00000003936) #22	Bhlha15 (ENSDORG00000026874)	Lmtk2 (ENSDORG00000003934) #23	Ocm (ENSDORG00000012852) #24	Ccz1 (ENSDORG00000013281) #25	ENSDORG00000028983	Rsph10b (ENSDORG00000027674) #27	ENSDORG00000026010 #28	Aimp2 (ENSDORG00000029049) #29	Ankrd61 (ENSDORG00000016272) #31	Eif2ak1 (ENSDORG00000016271) #30	ENSDORG00000025319 #33	Cyth3 (ENSDORG00000024524) #35	ENSDORG00000028442 #36	Rac1 (ENSDORG00000014388)	Daglb (ENSDORG00000002646)
Rodentia_A	ANCESTRAL SPECIES	10	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Sciuridae	ANCESTRAL SPECIES	9	ENSGT00510000046986.e.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300.ib #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Marmotini	ANCESTRAL SPECIES	85	ENSGT00510000046986.e.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300.ib #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Marmotini_b	ANCESTRAL SPECIES	131	ENSGT00510000046986.e.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300.ib #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826.w #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Arctic ground squirrel	MODERN SPECIES	300	CPSF4 (ENSUPAG00010007865) #8	PTCD1 (ENSUPAG00010007850) #9	BUD31 (ENSUPAG00010007837) #10	PDAP1 (ENSUPAG00010007814) #11	ARPC1B (ENSUPAG00010007793) #12	ARPC1A (ENSUPAG00010007778) #13	ENSUPAG00010007740 #14	KPNA7 (ENSUPAG00010007717) #15	SMURF1 (ENSUPAG00010007614) #16	ENSUPAG00010007610	TRRAP (ENSUPAG00010006983) #17	TMEM130 (ENSUPAG00010006958) #18	NPTX2 (ENSUPAG00010006944) #19	BAIAP2L1 (ENSUPAG00010006906) #20	BRI3 (ENSUPAG00010006894) #21	TECPR1 (ENSUPAG00010006865) #22	BHLHA15 (ENSUPAG00010006858)	LMTK2 (ENSUPAG00010006825) #23	ENSUPAG00010006809 #24	ENSUPAG00010006347 #25	ENSUPAG00010006316 #27	PMS2 (ENSUPAG00010006292) #28	ENSUPAG00010006282 #29	ANKRD61 (ENSUPAG00010006253) #31	EIF2AK1 (ENSUPAG00010006214) #30	USP42 (ENSUPAG00010006190) #33	CYTH3 (ENSUPAG00010006163) #35	FAM220A (ENSUPAG00010006158)	ENSUPAG00010006155 #36	ENSUPAG00010006147	RAC1 (ENSUPAG00010006103)
Squirrel	MODERN SPECIES	350	ENSSTOG00000034172	ATP5MF (ENSSTOG00000023928) #7	CPSF4 (ENSSTOG00000001688) #8	PTCD1 (ENSSTOG00000001682) #9	BUD31 (ENSSTOG00000023828) #10	PDAP1 (ENSSTOG00000001679) #11	ARPC1B (ENSSTOG00000001668) #12	ARPC1A (ENSSTOG00000001660) #13	KPNA7 (ENSSTOG00000032733) #15	SMURF1 (ENSSTOG00000015427) #16	TRRAP (ENSSTOG00000028392) #17	TMEM130 (ENSSTOG00000010723) #18	NPTX2 (ENSSTOG00000003631) #19	BAIAP2L1 (ENSSTOG00000020782) #20	BRI3 (ENSSTOG00000021622) #21	TECPR1 (ENSSTOG00000009733) #22	BHLHA15 (ENSSTOG00000009728)	LMTK2 (ENSSTOG00000009706) #23	ENSSTOG00000010731 #24	ENSSTOG00000006071 #25	ENSSTOG00000026631 #27	ENSSTOG00000006111 #28	ENSSTOG00000029156 #29	ANKRD61 (ENSSTOG00000009292) #31	EIF2AK1 (ENSSTOG00000009274) #30	USP42 (ENSSTOG00000001211) #33	CYTH3 (ENSSTOG00000014555) #35	ENSSTOG00000033124	FAM220A (ENSSTOG00000033953)	ENSSTOG00000028517 #36	RAC1 (ENSSTOG00000006784)
Alpin marmot	MODERN SPECIES	77	ENSMMMG00000005390	PTCD1 (ENSMMMG00000005393) #9	BUD31 (ENSMMMG00000005402) #10	PDAP1 (ENSMMMG00000005448) #11	ARPC1B (ENSMMMG00000005459) #12	ARPC1A (ENSMMMG00000005477) #13	ENSMMMG00000005492 #14	KPNA7 (ENSMMMG00000005564) #15	SMURF1 (ENSMMMG00000005602) #16	TRRAP (ENSMMMG00000005650) #17	TMEM130 (ENSMMMG00000006225) #18	NPTX2 (ENSMMMG00000006236) #19	BAIAP2L1 (ENSMMMG00000006242) #20	BRI3 (ENSMMMG00000006279) #21	ENSMMMG00000006285	TECPR1 (ENSMMMG00000006293) #22	BHLHA15 (ENSMMMG00000006320)	LMTK2 (ENSMMMG00000006321) #23	ENSMMMG00000006340 #24	ENSMMMG00000006346 #25	ENSMMMG00000006369 #27	ENSMMMG00000006406 #28	AIMP2 (ENSMMMG00000006437) #29	EIF2AK1 (ENSMMMG00000006468) #30	ANKRD61 (ENSMMMG00000006880) #31	USP42 (ENSMMMG00000006895) #33	CYTH3 (ENSMMMG00000006920) #35	FAM220A (ENSMMMG00000006949)	ENSMMMG00000006952 #36	ENSMMMG00000006962	RAC1 (ENSMMMG00000006966)
Eurasian red squirrel	MODERN SPECIES	9	CPSF4 (ENSSVLG00005022210) #8	PTCD1 (ENSSVLG00005022169) #9	BUD31 (ENSSVLG00005022102) #10	ENSSVLG00005022058 #11	ARPC1B (ENSSVLG00005021982) #12	ENSSVLG00005021905 #13	ENSSVLG00005021650 #14	KPNA7 (ENSSVLG00005021513) #15	SMURF1 (ENSSVLG00005021442) #16	TRRAP (ENSSVLG00005021317) #17	TMEM130 (ENSSVLG00005021101) #18	NPTX2 (ENSSVLG00005021028) #19	BAIAP2L1 (ENSSVLG00005021009) #20	BRI3 (ENSSVLG00005020971) #21	ENSSVLG00005020936	TECPR1 (ENSSVLG00005020896) #22	BHLHA15 (ENSSVLG00005020870)	LMTK2 (ENSSVLG00005020820) #23	ENSSVLG00005020777 #24	ENSSVLG00005020724 #25	ENSSVLG00005020563 #27	PMS2 (ENSSVLG00005020367) #28	ENSSVLG00005020254 #29	ANKRD61 (ENSSVLG00005020185) #31	EIF2AK1 (ENSSVLG00005020146) #30	ENSSVLG00005020095 #33	CYTH3 (ENSSVLG00005020027) #35	ENSSVLG00005020002	ENSSVLG00005019953 #36	ENSSVLG00005019810	DAGLB (ENSSVLG00005019691)
Hystricomorpha	ANCESTRAL SPECIES	17	ENSGT00940000162347	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825.h.a #35	ENSGT00390000014156	ENSGT00940000155825.h.b #35	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	16	ENSGT00940000162347	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825.h.a #35	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a	ENSGT00940000156486	ENSGT00390000004010.a.b.a
Hystricomorpha_b	ANCESTRAL SPECIES	55	ENSGT00940000162347	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825.h.b #35	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a	ENSGT00940000156486	ENSGT00390000004010.a.b.a
Long-tailed chinchilla	MODERN SPECIES	167	ZNF394 (ENSCLAG00000005098)	ATP5MF (ENSCLAG00000004636) #7	CPSF4 (ENSCLAG00000007050) #8	PTCD1 (ENSCLAG00000006354) #9	BUD31 (ENSCLAG00000008079) #10	PDAP1 (ENSCLAG00000007628) #11	ARPC1B (ENSCLAG00000006996) #12	ARPC1A (ENSCLAG00000006964) #13	KPNA7 (ENSCLAG00000006067) #15	SMURF1 (ENSCLAG00000005211) #16	TRRAP (ENSCLAG00000007110) #17	TMEM130 (ENSCLAG00000006489) #18	NPTX2 (ENSCLAG00000013930) #19	BAIAP2L1 (ENSCLAG00000013528) #20	BRI3 (ENSCLAG00000012095) #21	TECPR1 (ENSCLAG00000006941) #22	BHLHA15 (ENSCLAG00000006581)	LMTK2 (ENSCLAG00000005806) #23	ENSCLAG00000007617 #24	ENSCLAG00000006812 #25	ENSCLAG00000004477 #27	ENSCLAG00000009853 #28	AIMP2 (ENSCLAG00000009734) #29	ANKRD61 (ENSCLAG00000008441) #31	EIF2AK1 (ENSCLAG00000007600) #30	ENSCLAG00000006764	USP42 (ENSCLAG00000004585) #33	ENSCLAG00000007268 #35	ENSCLAG00000007013 #35	ENSCLAG00000006763 #36	RAC1 (ENSCLAG00000009375)
Degu	MODERN SPECIES	72	ZNF655 (ENSODEG00000011702)	ZKSCAN5 (ENSODEG00000012014)	ENSODEG00000012299	ENSODEG00000011181 #8	BUD31 (ENSODEG00000011226) #10	ENSODEG00000012197 #11	ARPC1B (ENSODEG00000011865) #12	ENSODEG00000010891 #13	SMURF1 (ENSODEG00000012098) #16	TRRAP (ENSODEG00000013196) #17	TMEM130 (ENSODEG00000010706) #18	NPTX2 (ENSODEG00000011311) #19	ENSODEG00000012635	BAIAP2L1 (ENSODEG00000010504) #20	BRI3 (ENSODEG00000010514) #21	TECPR1 (ENSODEG00000011578) #22	LMTK2 (ENSODEG00000012233) #23	ENSODEG00000011077 #24	ENSODEG00000011251 #25	ENSODEG00000012084 #28	ENSODEG00000011718 #29	EIF2AK1 (ENSODEG00000011509) #30	ENSODEG00000019832	ENSODEG00000012213 #33	ENSODEG00000012217	CYTH3 (ENSODEG00000011710) #35	ENSODEG00000010243	ENSODEG00000010724 #36	ENSODEG00000010508	DAGLB (ENSODEG00000010099)	KDELR2 (ENSODEG00000009858)
Guinea pig	MODERN SPECIES	30	ZNF394 (ENSCPOG00000013321)	ENSCPOG00000034651	CPSF4 (ENSCPOG00000001783) #8	PTCD1 (ENSCPOG00000001780) #9	BUD31 (ENSCPOG00000001779) #10	PDAP1 (ENSCPOG00000023217) #11	ARPC1B (ENSCPOG00000020413) #12	ENSCPOG00000001777 #13	KPNA7 (ENSCPOG00000014326) #15	SMURF1 (ENSCPOG00000000124) #16	TRRAP (ENSCPOG00000007298) #17	TMEM130 (ENSCPOG00000010669) #18	NPTX2 (ENSCPOG00000012135) #19	BAIAP2L1 (ENSCPOG00000009274) #20	BRI3 (ENSCPOG00000025281) #21	TECPR1 (ENSCPOG00000010430) #22	BHLHA15 (ENSCPOG00000033368)	LMTK2 (ENSCPOG00000009408) #23	ENSCPOG00000031560	ENSCPOG00000011911 #24	ENSCPOG00000014787 #25	ENSCPOG00000019836 #27	PMS2 (ENSCPOG00000000555) #28	AIMP2 (ENSCPOG00000014855) #29	EIF2AK1 (ENSCPOG00000014860) #30	ANKRD61 (ENSCPOG00000014869) #31	ENSCPOG00000013717 #33	CYTH3 (ENSCPOG00000010827) #35	ENSCPOG00000031545 #36	RAC1 (ENSCPOG00000008590)	DAGLB (ENSCPOG00000008596)
Naked mole-rat female	MODERN SPECIES		PDAP1 (ENSHGLG00000013857) #11	ARPC1B (ENSHGLG00000017816) #12	ENSHGLG00000017246 #13	ENSHGLG00000043221	ENSHGLG00000009628 #15	SMURF1 (ENSHGLG00000006003) #16	TRRAP (ENSHGLG00000013805) #17	TMEM130 (ENSHGLG00000008380) #18	ENSHGLG00000042548	ENSHGLG00000007737 #19	ENSHGLG00000044552	BAIAP2L1 (ENSHGLG00000017707) #20	ENSHGLG00000032492	ENSHGLG00000013687	ENSHGLG00000015104	TECPR1 (ENSHGLG00000018344) #22	BHLHA15 (ENSHGLG00000033900)	LMTK2 (ENSHGLG00000013780) #23	ENSHGLG00000013637	ENSHGLG00000020676	ENSHGLG00000009254 #24	ENSHGLG00000007267 #25	ENSHGLG00000010064 #27	ENSHGLG00000038861	PMS2 (ENSHGLG00000007741) #28	AIMP2 (ENSHGLG00000041958) #29	ANKRD61 (ENSHGLG00000005518) #31	EIF2AK1 (ENSHGLG00000015194) #30	ENSHGLG00000035813	USP42 (ENSHGLG00000018062) #33	ENSHGLG00000017988 #35
Lagomorpha	ANCESTRAL SPECIES	54	ENSGT00940000162347	ENSGT00940000154488.A.b.a.b	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31
Rabbit	MODERN SPECIES	606															BAIAP2L1 (ENSOCUG00000000730) #20	TECPR1 (ENSOCUG00000024513) #22	BHLHA15 (ENSOCUG00000025058)	LMTK2 (ENSOCUG00000017282) #23	ENSOCUG00000007419 #24	ENSOCUG00000007103 #25	ENSOCUG00000022342 #27	PMS2 (ENSOCUG00000012590) #28	AIMP2 (ENSOCUG00000012599) #29	EIF2AK1 (ENSOCUG00000012606) #30	ANKRD61 (ENSOCUG00000012623) #31	ENSOCUG00000035023	USP42 (ENSOCUG00000004654) #33
Pika	MODERN SPECIES	4638																TECPR1 (ENSOPRG00000005250) #22
Tree shrew	MODERN SPECIES	3251																ENSTBEG00000016701 #22	LMTK2 (ENSTBEG00000016375) #23
Laurasiatheria	ANCESTRAL SPECIES	10	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00510000047886.a #22
Hedgehog	MODERN SPECIES	8625																TECPR1 (ENSEEUG00000010202) #22
Laurasiatheria_a	ANCESTRAL SPECIES	12	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36
Artiodactyla	ANCESTRAL SPECIES	10	ENSGT00510000046986.x.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a
Suina	ANCESTRAL SPECIES	46	ENSGT00510000046986.x.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a	ENSGT00940000156486
Pig	MODERN SPECIES	11	ENSSSCG00000034019 #7	CPSF4 (ENSSSCG00000026896) #8	PTCD1 (ENSSSCG00000007622) #9	BUD31 (ENSSSCG00000007623) #10	PDAP1 (ENSSSCG00000033450) #11	ARPC1A (ENSSSCG00000007609) #13	ENSSSCG00000035534 #14	ARPC1B (ENSSSCG00000007625) #12	KPNA7 (ENSSSCG00000007607) #15	SMURF1 (ENSSSCG00000030153) #16	TRRAP (ENSSSCG00000007606) #17	TMEM130 (ENSSSCG00000007605) #18	NPTX2 (ENSSSCG00000007603) #19	BAIAP2L1 (ENSSSCG00000007602) #20	BRI3 (ENSSSCG00000037605) #21	TECPR1 (ENSSSCG00000007601) #22	BHLHA15 (ENSSSCG00000038489)	LMTK2 (ENSSSCG00000007599) #23	ENSSSCG00000007596 #24	ENSSSCG00000025940 #25	ENSSSCG00000007589 #27	PMS2 (ENSSSCG00000007590) #28	AIMP2 (ENSSSCG00000024245) #29	ANKRD61 (ENSSSCG00000007593) #31	EIF2AK1 (ENSSSCG00000007592) #30	USP42 (ENSSSCG00000032705) #33	CYTH3 (ENSSSCG00000034768) #35	ENSSSCG00000047832 #36	RAC1 (ENSSSCG00000035090)	DAGLB (ENSSSCG00000027288)	KDELR2 (ENSSSCG00000031432)
Chacoan peccary	MODERN SPECIES	833	ENSCWAG00000012721 #7	CPSF4 (ENSCWAG00000012575) #8	PTCD1 (ENSCWAG00000012549) #9	BUD31 (ENSCWAG00000012494) #10	PDAP1 (ENSCWAG00000012444) #11	ARPC1B (ENSCWAG00000012397) #12	ARPC1A (ENSCWAG00000012355) #13	ENSCWAG00000011967 #14	KPNA7 (ENSCWAG00000011846) #15	SMURF1 (ENSCWAG00000011777) #16	TRRAP (ENSCWAG00000011543) #17	TMEM130 (ENSCWAG00000011040) #18	NPTX2 (ENSCWAG00000010978) #19	BAIAP2L1 (ENSCWAG00000010874) #20	BRI3 (ENSCWAG00000010841) #21	TECPR1 (ENSCWAG00000010756) #22	BHLHA15 (ENSCWAG00000010732)	LMTK2 (ENSCWAG00000010619) #23	ENSCWAG00000010569 #24	ENSCWAG00000010481 #25	ENSCWAG00000010359 #27	PMS2 (ENSCWAG00000010164) #28	AIMP2 (ENSCWAG00000010081) #29	ANKRD61 (ENSCWAG00000010045) #31	EIF2AK1 (ENSCWAG00000010001) #30	USP42 (ENSCWAG00000009829) #33	CYTH3 (ENSCWAG00000009772) #35	FAM220A (ENSCWAG00000009757)	ENSCWAG00000009732 #36	RAC1 (ENSCWAG00000009644)	DAGLB (ENSCWAG00000009568)
Artiodactyla_a	ANCESTRAL SPECIES	10	ENSGT00510000046986.x.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a
Artiodactyla_b	ANCESTRAL SPECIES	9	ENSGT00510000046986.x.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.q.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a
Cetacea	ANCESTRAL SPECIES	3	ENSGT00510000046986.x.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.q.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00510000046986.x.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.q.a.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a	ENSGT00940000156486
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00510000046986.x.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.q.a.b.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a	ENSGT00940000156486
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00510000046986.x.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.q.a.b.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000154277.a.b.b.m.a.a.b	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00940000154509	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00510000046986.x.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.q.a.b.b #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000154277.a.b.b.m.a.a.b	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a	ENSGT00940000156486
Beluga whale	MODERN SPECIES	48	ENSDLEG00000015761 #7	CPSF4 (ENSDLEG00000015772) #8	PTCD1 (ENSDLEG00000015782) #9	BUD31 (ENSDLEG00000015820) #10	PDAP1 (ENSDLEG00000015839) #11	ARPC1B (ENSDLEG00000015861) #12	ARPC1A (ENSDLEG00000015896) #13	ENSDLEG00000015938 #14	KPNA7 (ENSDLEG00000016100) #15	SMURF1 (ENSDLEG00000016179) #16	TRRAP (ENSDLEG00000016992) #17	TMEM130 (ENSDLEG00000020386) #18	NPTX2 (ENSDLEG00000020388) #19	BAIAP2L1 (ENSDLEG00000020393) #20	BRI3 (ENSDLEG00000020405) #21	TECPR1 (ENSDLEG00000020413) #22	BHLHA15 (ENSDLEG00000020448)	LMTK2 (ENSDLEG00000020452) #23	ENSDLEG00000020471 #24	ENSDLEG00000020475 #25	ENSDLEG00000020481	ENSDLEG00000020484	PMS2 (ENSDLEG00000020496) #28	AIMP2 (ENSDLEG00000020551) #29	EIF2AK1 (ENSDLEG00000020556) #30	USP42 (ENSDLEG00000020630) #33	CYTH3 (ENSDLEG00000020671) #35	RPL22L1 (ENSDLEG00000020716)	FAM220A (ENSDLEG00000020719)	ENSDLEG00000020721 #36	RAC1 (ENSDLEG00000020724)
Narwhal	MODERN SPECIES	299	ENSMMNG00015002418 #7	CPSF4 (ENSMMNG00015002457) #8	PTCD1 (ENSMMNG00015002519) #9	BUD31 (ENSMMNG00015002560) #10	PDAP1 (ENSMMNG00015002587) #11	ARPC1B (ENSMMNG00015002613) #12	ENSMMNG00015002635 #13	ENSMMNG00015002693 #14	KPNA7 (ENSMMNG00015002759) #15	SMURF1 (ENSMMNG00015002854) #16	TRRAP (ENSMMNG00015003087) #17	TMEM130 (ENSMMNG00015003509) #18	NPTX2 (ENSMMNG00015003563) #19	BAIAP2L1 (ENSMMNG00015003589) #20	BRI3 (ENSMMNG00015003639) #21	TECPR1 (ENSMMNG00015003675) #22	BHLHA15 (ENSMMNG00015003745)	LMTK2 (ENSMMNG00015003763) #23	ENSMMNG00015003789 #24	ENSMMNG00015003818 #25	ENSMMNG00015003873 #27	ENSMMNG00015003915	PMS2 (ENSMMNG00015003939) #28	AIMP2 (ENSMMNG00015003978) #29	EIF2AK1 (ENSMMNG00015004004) #30	USP42 (ENSMMNG00015004036) #33	CYTH3 (ENSMMNG00015004066) #35	ENSMMNG00015004084	FAM220A (ENSMMNG00015004094)	ENSMMNG00015004103 #36	RAC1 (ENSMMNG00015004118)
Vaquita	MODERN SPECIES	6	ENSPSNG00000010232 #7	CPSF4 (ENSPSNG00000010306) #8	PTCD1 (ENSPSNG00000010406) #9	BUD31 (ENSPSNG00000010482) #10	PDAP1 (ENSPSNG00000010590) #11	ARPC1B (ENSPSNG00000010674) #12	ENSPSNG00000010796 #13	ENSPSNG00000010917 #14	KPNA7 (ENSPSNG00000011346) #15	SMURF1 (ENSPSNG00000011505) #16	TRRAP (ENSPSNG00000011688) #17	TMEM130 (ENSPSNG00000011895) #18	NPTX2 (ENSPSNG00000012212) #19	BAIAP2L1 (ENSPSNG00000012292) #20	ENSPSNG00000012465 #21	TECPR1 (ENSPSNG00000012533) #22	BHLHA15 (ENSPSNG00000012595)	LMTK2 (ENSPSNG00000012631) #23	ENSPSNG00000012777 #24	ENSPSNG00000012850 #25	ENSPSNG00000013097 #27	ENSPSNG00000013383	PMS2 (ENSPSNG00000013449) #28	AIMP2 (ENSPSNG00000013573) #29	EIF2AK1 (ENSPSNG00000013745) #30	ENSPSNG00000013966	USP42 (ENSPSNG00000013999) #33	CYTH3 (ENSPSNG00000014047) #35	ENSPSNG00000014115	FAM220A (ENSPSNG00000014179)	ENSPSNG00000014218 #36
Dolphin	MODERN SPECIES	1549														BAIAP2L1 (ENSTTRG00000015706) #20	BRI3 (ENSTTRG00000015705) #21	TECPR1 (ENSTTRG00000015702) #22	BHLHA15 (ENSTTRG00000015701)	LMTK2 (ENSTTRG00000015697) #23
Sperm whale	MODERN SPECIES	5	ENSPCTG00005011057	TMEM225B (ENSPCTG00005011436)	FAM200A (ENSPCTG00005011475)	ZNF789 (ENSPCTG00005011499)	ZKSCAN5 (ENSPCTG00005011547)	ZNF394 (ENSPCTG00005011596)	TMEM130 (ENSPCTG00005011667) #18	TRRAP (ENSPCTG00005012036) #17	SMURF1 (ENSPCTG00005012298) #16	KPNA7 (ENSPCTG00005012406) #15	ENSPCTG00005012809 #14	ENSPCTG00005013240 #13	NPTX2 (ENSPCTG00005013455) #19	BAIAP2L1 (ENSPCTG00005013574) #20	BRI3 (ENSPCTG00005013964) #21	TECPR1 (ENSPCTG00005014032) #22	BHLHA15 (ENSPCTG00005014363)	LMTK2 (ENSPCTG00005014425) #23	OCM2 (ENSPCTG00005014893) #24	CCZ1 (ENSPCTG00005014972) #25	ENSPCTG00005015255 #27	PMS2 (ENSPCTG00005015618) #28	AIMP2 (ENSPCTG00005015738) #29	EIF2AK1 (ENSPCTG00005015824) #30	ENSPCTG00005015924	USP42 (ENSPCTG00005016015) #33	CYTH3 (ENSPCTG00005016072) #35	FAM220A (ENSPCTG00005016247)	ENSPCTG00005016265 #36	RAC1 (ENSPCTG00005016300)	DAGLB (ENSPCTG00005016386)
Blue whale	MODERN SPECIES	6	ENSBMSG00010012514 #7	ENSBMSG00010012551 #8	PTCD1 (ENSBMSG00010013917) #9	ENSBMSG00010013970 #10	PDAP1 (ENSBMSG00010014018) #11	ARPC1B (ENSBMSG00010014056) #12	ENSBMSG00010014113 #13	ENSBMSG00010014169 #14	KPNA7 (ENSBMSG00010014304) #15	SMURF1 (ENSBMSG00010014386) #16	TRRAP (ENSBMSG00010014624) #17	TMEM130 (ENSBMSG00010015649) #18	NPTX2 (ENSBMSG00010015873) #19	BAIAP2L1 (ENSBMSG00010015891) #20	ENSBMSG00010015916	TECPR1 (ENSBMSG00010015935) #22	BHLHA15 (ENSBMSG00010015945)	LMTK2 (ENSBMSG00010015958) #23	ENSBMSG00010015991 #24	ENSBMSG00010016031 #25	PMS2 (ENSBMSG00010016204) #28	ENSBMSG00010016495	AIMP2 (ENSBMSG00010016522) #29	EIF2AK1 (ENSBMSG00010016567) #30	ANKRD61 (ENSBMSG00010016589) #31	ENSBMSG00010016626 #33	CYTH3 (ENSBMSG00010016657) #35	FAM220A (ENSBMSG00010016767)	ENSBMSG00010016778 #36	ENSBMSG00010016792	RAC1 (ENSBMSG00010016821)
Pecora	ANCESTRAL SPECIES	10	ENSGT00940000154488.A.b.a.b	ENSGT00510000046986.x.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.q.a.c.a.b #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000004552.c.a	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36
Percora_a	ANCESTRAL SPECIES	9	ENSGT00940000154488.A.b.a.b	ENSGT00510000046986.x.a.d #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.q.a.c.a.b #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014547.c.l #36	ENSGT00390000004552.c.a	ENSGT00390000014156	ENSGT00960000187139
Bovidae	ANCESTRAL SPECIES	11	ENSGT00940000154488.A.b.a.b	ENSGT00510000046986.x.a.d #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.q.a.c.a.b #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000004552.c.a	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c.k #36
Bovinae	ANCESTRAL SPECIES	7	ENSGT00940000154488.A.b.a.b	ENSGT00510000046986.x.a.d #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b.m #12	ENSGT00950000183183.b.a.q.a.c.a.b #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000004552.c.a	ENSGT00390000014547.c.k #36	ENSGT00940000153500.a.a	ENSGT00940000156486
Bos	ANCESTRAL SPECIES	9	ENSGT00940000154488.A.b.a.b	ENSGT00510000046986.x.a.d #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b.m #12	ENSGT00950000183183.b.a.q.a.c.a.b #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000004552.c.a	ENSGT00390000014547.c.k #36	ENSGT00960000187139	ENSGT00390000014547.c.l #36
Bos_a	ANCESTRAL SPECIES	35	ENSGT00510000046986.x.a.d #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b.m #12	ENSGT00950000183183.b.a.q.b #13	ENSGT00950000183183.b.a.q.a.c.b.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000004552.c.a	ENSGT00390000014547.c.k #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Wild yak	MODERN SPECIES	1481								ENSBMUG00000015109 #13	KPNA7 (ENSBMUG00000015095) #15	SMURF1 (ENSBMUG00000015064) #16	TRRAP (ENSBMUG00000014924) #17	TMEM130 (ENSBMUG00000014663) #18	NPTX2 (ENSBMUG00000014653) #19	BAIAP2L1 (ENSBMUG00000014648) #20	BRI3 (ENSBMUG00000014621) #21	TECPR1 (ENSBMUG00000014611) #22	BHLHA15 (ENSBMUG00000014568)	LMTK2 (ENSBMUG00000014553) #23	ENSBMUG00000014529 #24	ENSBMUG00000014511	ENSBMUG00000014499 #25	ENSBMUG00000014408 #27	PMS2 (ENSBMUG00000014299) #28	AIMP2 (ENSBMUG00000014263) #29	ANKRD61 (ENSBMUG00000014242) #31	EIF2AK1 (ENSBMUG00000014219) #30	USP42 (ENSBMUG00000014180) #33	CYTH3 (ENSBMUG00000014119) #35	ENSBMUG00000014102	ENSBMUG00000014095	ENSBMUG00000014076
Domestic yak	MODERN SPECIES	18	CPSF4 (ENSBGRG00000024142) #8	PTCD1 (ENSBGRG00000024303) #9	BUD31 (ENSBGRG00000024361) #10	PDAP1 (ENSBGRG00000024415) #11	ENSBGRG00000024483 #12	ENSBGRG00000024499 #13	ENSBGRG00000024515 #13	KPNA7 (ENSBGRG00000024547) #15	SMURF1 (ENSBGRG00000024646) #16	ENSBGRG00000024800	TRRAP (ENSBGRG00000024841) #17	TMEM130 (ENSBGRG00000024946) #18	NPTX2 (ENSBGRG00000025022) #19	BAIAP2L1 (ENSBGRG00000025058) #20	BRI3 (ENSBGRG00000025097) #21	TECPR1 (ENSBGRG00000025127) #22	BHLHA15 (ENSBGRG00000025237)	LMTK2 (ENSBGRG00000025270) #23	ENSBGRG00000025381 #24	ENSBGRG00000025431 #25	ENSBGRG00000025625 #27	PMS2 (ENSBGRG00000025668) #28	AIMP2 (ENSBGRG00000025683) #29	EIF2AK1 (ENSBGRG00000025699) #30	ANKRD61 (ENSBGRG00000025716) #31	USP42 (ENSBGRG00000025739) #33	ENSBGRG00000025761	CYTH3 (ENSBGRG00000025775) #35	ENSBGRG00000025810	ENSBGRG00000025813 #36	ENSBGRG00000025818 #36
Bos_b	ANCESTRAL SPECIES	6	ENSGT00940000162347	ENSGT00510000046986.x.a.d #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b.m #12	ENSGT00950000183183.b.a.q.a.c.a.b #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000004552.c.a	ENSGT00390000014547.c.k #36	ENSGT00960000187139	ENSGT00390000014547.c.l #36
Hybrid Bos Indicus	MODERN SPECIES	17	ENSBIXG00005001905	ENSBIXG00005014375	ENSBIXG00005014397 #7	CPSF4 (ENSBIXG00005014471) #8	PTCD1 (ENSBIXG00005014503) #9	BUD31 (ENSBIXG00005014534) #10	PDAP1 (ENSBIXG00005014563) #11	ENSBIXG00005014625 #12	ENSBIXG00005002057 #13	KPNA7 (ENSBIXG00005014735) #15	SMURF1 (ENSBIXG00005005409) #16	TRRAP (ENSBIXG00005015045) #17	TMEM130 (ENSBIXG00005015225) #18	NPTX2 (ENSBIXG00005015270) #19	BRI3 (ENSBIXG00005015306) #21	TECPR1 (ENSBIXG00005015345) #22	BHLHA15 (ENSBIXG00005015363)	BAIAP2L1 (ENSBIXG00005015423) #20	LMTK2 (ENSBIXG00005002294) #23	ENSBIXG00005015523 #24	ENSBIXG00005015615 #25	ENSBIXG00005015885 #27	PMS2 (ENSBIXG00005002516) #28	AIMP2 (ENSBIXG00005015986) #29	ANKRD61 (ENSBIXG00005016000) #31	EIF2AK1 (ENSBIXG00005016011) #30	ENSBIXG00005016025	USP42 (ENSBIXG00005016049) #33	CYTH3 (ENSBIXG00005016102) #35	ENSBIXG00005007461	ENSBIXG00005016165 #36
Cow	MODERN SPECIES	17	ZNF394 (ENSBTAG00000016190)	ATP5MF (ENSBTAG00000002094) #7	CPSF4 (ENSBTAG00000002090) #8	PTCD1 (ENSBTAG00000020440) #9	BUD31 (ENSBTAG00000020439) #10	PDAP1 (ENSBTAG00000044040) #11	ARPC1B (ENSBTAG00000046248) #12	ARPC1A (ENSBTAG00000004242) #13	KPNA7 (ENSBTAG00000015737) #15	SMURF1 (ENSBTAG00000007118) #16	TRRAP (ENSBTAG00000007113) #17	TMEM130 (ENSBTAG00000005679) #18	NPTX2 (ENSBTAG00000045896) #19	BAIAP2L1 (ENSBTAG00000019181) #20	BRI3 (ENSBTAG00000022825) #21	TECPR1 (ENSBTAG00000051678) #22	BHLHA15 (ENSBTAG00000046010)	LMTK2 (ENSBTAG00000004135) #23	ENSBTAG00000046943 #24	CCZ1 (ENSBTAG00000003288) #25	RSPH10B (ENSBTAG00000005908) #27	PMS2 (ENSBTAG00000007364) #28	AIMP2 (ENSBTAG00000007367) #29	EIF2AK1 (ENSBTAG00000007370) #30	ANKRD61 (ENSBTAG00000007372) #31	USP42 (ENSBTAG00000000725) #33	CYTH3 (ENSBTAG00000007384) #35	ENSBTAG00000046517	ENSBTAG00000051511	ENSBTAG00000053719 #36	RAC1 (ENSBTAG00000053390)
Caprinae	ANCESTRAL SPECIES	7	ENSGT00940000154488.A.b.a.b	ENSGT00510000046986.y #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.q.a.c.a.b.a.a.a #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000004552.c.a	ENSGT00390000014156	ENSGT00390000014547.c.k.b #36	ENSGT00390000014547.c.l #36
Rambouillet Sheep	MODERN SPECIES	16	ZKSCAN5 (ENSOARG00020022085)	ZNF394 (ENSOARG00020022119)	ENSOARG00020022141 #7	CPSF4 (ENSOARG00020022199) #8	BUD31 (ENSOARG00020022312) #10	PDAP1 (ENSOARG00020022360) #11	ARPC1B (ENSOARG00020022406) #12	ENSOARG00020022442 #13	KPNA7 (ENSOARG00020022480) #15	SMURF1 (ENSOARG00020022545) #16	TRRAP (ENSOARG00020022843) #17	TMEM130 (ENSOARG00020023081) #18	NPTX2 (ENSOARG00020023277) #19	BAIAP2L1 (ENSOARG00020023297) #20	BRI3 (ENSOARG00020023331) #21	TECPR1 (ENSOARG00020023364) #22	BHLHA15 (ENSOARG00020023426)	ENSOARG00020023523 #24	ENSOARG00020023544 #25	ENSOARG00020023637 #27	PMS2 (ENSOARG00020023689) #28	AIMP2 (ENSOARG00020023890) #29	EIF2AK1 (ENSOARG00020023922) #30	ANKRD61 (ENSOARG00020023934) #31	ENSOARG00020023952	CYTH3 (ENSOARG00020023985) #35	ENSOARG00020024042	ENSOARG00020024050	ENSOARG00020024065 #36	RAC1 (ENSOARG00020006453)	DAGLB (ENSOARG00020006576)
Goat	MODERN SPECIES	17	ENSCHIG00000005075	ENSCHIG00000021771 #7	CPSF4 (ENSCHIG00000014313) #8	PTCD1 (ENSCHIG00000027000) #9	BUD31 (ENSCHIG00000015455) #10	PDAP1 (ENSCHIG00000024190) #11	ARPC1B (ENSCHIG00000021068) #12	ENSCHIG00000013674 #13	KPNA7 (ENSCHIG00000026332) #15	SMURF1 (ENSCHIG00000017881) #16	TRRAP (ENSCHIG00000025236) #17	TMEM130 (ENSCHIG00000025196) #18	NPTX2 (ENSCHIG00000016145) #19	BAIAP2L1 (ENSCHIG00000003641) #20	BRI3 (ENSCHIG00000005545) #21	TECPR1 (ENSCHIG00000025300) #22	BHLHA15 (ENSCHIG00000008225)	LMTK2 (ENSCHIG00000023995) #23	ENSCHIG00000026637 #24	ENSCHIG00000016566 #25	ENSCHIG00000021579 #27	PMS2 (ENSCHIG00000017062) #28	AIMP2 (ENSCHIG00000014822) #29	EIF2AK1 (ENSCHIG00000014254) #30	ANKRD61 (ENSCHIG00000014423) #31	USP42 (ENSCHIG00000017502) #33	CYTH3 (ENSCHIG00000025012) #35	ENSCHIG00000013157	ENSCHIG00000012626 #36	RAC1 (ENSCHIG00000023897)	DAGLB (ENSCHIG00000025751)
Siberian musk deer	MODERN SPECIES	1230	ZNF394 (ENSMMSG00000014499)	ENSMMSG00000014510 #7	CPSF4 (ENSMMSG00000014539) #8	PTCD1 (ENSMMSG00000014637) #9	BUD31 (ENSMMSG00000014656) #10	PDAP1 (ENSMMSG00000014684) #11	ARPC1B (ENSMMSG00000014707) #12	ENSMMSG00000014733 #13	ENSMMSG00000014765 #15	SMURF1 (ENSMMSG00000014815) #16	TRRAP (ENSMMSG00000014927) #17	TMEM130 (ENSMMSG00000015018) #18	NPTX2 (ENSMMSG00000015078) #19	BAIAP2L1 (ENSMMSG00000015095) #20	BRI3 (ENSMMSG00000015142) #21	TECPR1 (ENSMMSG00000015173) #22	BHLHA15 (ENSMMSG00000015278)	LMTK2 (ENSMMSG00000015302) #23	ENSMMSG00000015375 #24	ENSMMSG00000015402 #25	ENSMMSG00000015506 #27	ENSMMSG00000015595	PMS2 (ENSMMSG00000015622) #28	AIMP2 (ENSMMSG00000015780) #29	EIF2AK1 (ENSMMSG00000015821) #30	ANKRD61 (ENSMMSG00000015862) #31	USP42 (ENSMMSG00000015893) #33	CYTH3 (ENSMMSG00000016610) #35	ENSMMSG00000016775 #36	ENSMMSG00000016833	ENSMMSG00000016866
Yarkand deer	MODERN SPECIES	1	ENSCHYG00000012361	ENSCHYG00000012401 #7	CPSF4 (ENSCHYG00000012568) #8	PTCD1 (ENSCHYG00000012720) #9	BUD31 (ENSCHYG00000012781) #10	PDAP1 (ENSCHYG00000012875) #11	ARPC1B (ENSCHYG00000012964) #12	ENSCHYG00000013066 #13	KPNA7 (ENSCHYG00000013180) #15	SMURF1 (ENSCHYG00000013359) #16	TRRAP (ENSCHYG00000013971) #17	TMEM130 (ENSCHYG00000016668) #18	NPTX2 (ENSCHYG00000016997) #19	BAIAP2L1 (ENSCHYG00000017061) #20	BRI3 (ENSCHYG00000017314) #21	TECPR1 (ENSCHYG00000017360) #22	BHLHA15 (ENSCHYG00000017555)	LMTK2 (ENSCHYG00000017591) #23	ENSCHYG00000017762 #24	ENSCHYG00000017835 #25	ENSCHYG00000018095 #27	PMS2 (ENSCHYG00000018507) #28	AIMP2 (ENSCHYG00000018933) #29	EIF2AK1 (ENSCHYG00000019050) #30	ANKRD61 (ENSCHYG00000019492) #31	USP42 (ENSCHYG00000019582) #33	CYTH3 (ENSCHYG00000019827) #35	ENSCHYG00000020209	ENSCHYG00000020241	ENSCHYG00000020267 #36	ENSCHYG00000020298
Camelidae	ANCESTRAL SPECIES	24	ENSGT00940000162347	ENSGT00940000154488.A.b.a.b	ENSGT00510000046986.x.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a	ENSGT00940000156486
Arabian camel	MODERN SPECIES	9	ENSCDRG00005011387	ENSCDRG00005011410 #7	CPSF4 (ENSCDRG00005011554) #8	PTCD1 (ENSCDRG00005011961) #9	BUD31 (ENSCDRG00005012145) #10	PDAP1 (ENSCDRG00005012264) #11	ARPC1B (ENSCDRG00005012372) #12	KPNA7 (ENSCDRG00005012622) #15	SMURF1 (ENSCDRG00005012771) #16	ENSCDRG00005012884 #17	ENSCDRG00005013327 #17	TMEM130 (ENSCDRG00005013368) #18	NPTX2 (ENSCDRG00005013554) #19	BAIAP2L1 (ENSCDRG00005013606) #20	BRI3 (ENSCDRG00005013667) #21	TECPR1 (ENSCDRG00005013716) #22	LMTK2 (ENSCDRG00005013925) #23	ENSCDRG00005014012 #24	ENSCDRG00005014080 #25	ENSCDRG00005014255 #27	PMS2 (ENSCDRG00005014320) #28	AIMP2 (ENSCDRG00005014622) #29	EIF2AK1 (ENSCDRG00005014748) #30	ANKRD61 (ENSCDRG00005014835) #31	USP42 (ENSCDRG00005014885) #33	CYTH3 (ENSCDRG00005015343) #35	ENSCDRG00005015633	ENSCDRG00005015668 #36	ENSCDRG00005015699	RAC1 (ENSCDRG00005015728)	DAGLB (ENSCDRG00005015756)
Laurasiatheria_b	ANCESTRAL SPECIES	12	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36
Carnivora	ANCESTRAL SPECIES	12	ENSGT00510000046986.v.b.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36
Caniformia	ANCESTRAL SPECIES	8	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00390000006548.b.k.j.b	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a
Caniformia_b	ANCESTRAL SPECIES	7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00390000006548.b.k.j.b	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Ursidae	ANCESTRAL SPECIES	3	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.b #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690.b #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00390000006548.b.k.j.b	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Ursus	ANCESTRAL SPECIES	32	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a.b #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690.b #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00390000006548.b.k.j.b	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00390000014156	ENSGT00940000153500.a.a	ENSGT00940000156486	ENSGT00390000004010.a.b.a	ENSGT00940000157625.b	ENSGT00920000149163
Polar bear	MODERN SPECIES	212	CPSF4 (ENSUMAG00000009474) #8	PTCD1 (ENSUMAG00000009455) #9	BUD31 (ENSUMAG00000009451) #10	PDAP1 (ENSUMAG00000009448) #11	ARPC1B (ENSUMAG00000009445) #12	ARPC1A (ENSUMAG00000009440) #13	ENSUMAG00000009433 #14	KPNA7 (ENSUMAG00000009427) #15	SMURF1 (ENSUMAG00000009290) #16	ENSUMAG00000009153 #17	TMEM130 (ENSUMAG00000009146) #18	NPTX2 (ENSUMAG00000009137) #19	ENSUMAG00000009130	BAIAP2L1 (ENSUMAG00000009124) #20	BRI3 (ENSUMAG00000009119) #21	TECPR1 (ENSUMAG00000009072) #22	LMTK2 (ENSUMAG00000009057) #23	ENSUMAG00000009054 #24	ENSUMAG00000009052 #25	ENSUMAG00000009008 #27	PMS2 (ENSUMAG00000008992) #28	AIMP2 (ENSUMAG00000008984) #29	ANKRD61 (ENSUMAG00000008978) #31	EIF2AK1 (ENSUMAG00000008793) #30	ENSUMAG00000008783 #33	ENSUMAG00000008780	ENSUMAG00000008775	RAC1 (ENSUMAG00000008742)	DAGLB (ENSUMAG00000008562)	KDELR2 (ENSUMAG00000008508)	ZDHHC4 (ENSUMAG00000008503)
American black bear	MODERN SPECIES	70												NPTX2 (ENSUAMG00000018821) #19	ENSUAMG00000018824	BAIAP2L1 (ENSUAMG00000018828) #20	BRI3 (ENSUAMG00000018829) #21	TECPR1 (ENSUAMG00000018830) #22	BHLHA15 (ENSUAMG00000018831)	LMTK2 (ENSUAMG00000018833) #23	ENSUAMG00000018834 #24	ENSUAMG00000018835 #25	ENSUAMG00000018836 #27
Giant Panda	MODERN SPECIES	1	ENSAMEG00000027254 #7	CPSF4 (ENSAMEG00000006252) #8	PTCD1 (ENSAMEG00000006224) #9	BUD31 (ENSAMEG00000006269) #10	PDAP1 (ENSAMEG00000006274) #11	ARPC1B (ENSAMEG00000006289) #12	ARPC1A (ENSAMEG00000006322) #13	ENSAMEG00000006326 #14	KPNA7 (ENSAMEG00000006691) #15	SMURF1 (ENSAMEG00000006728) #16	TRRAP (ENSAMEG00000006794) #17	TMEM130 (ENSAMEG00000006881) #18	NPTX2 (ENSAMEG00000006901) #19	BAIAP2L1 (ENSAMEG00000008876) #20	BRI3 (ENSAMEG00000025389) #21	TECPR1 (ENSAMEG00000008910) #22	ENSAMEG00000008945 #23	ENSAMEG00000008965 #24	ENSAMEG00000008970 #25	ENSAMEG00000009007 #27	PMS2 (ENSAMEG00000009032) #28	AIMP2 (ENSAMEG00000009065) #29	ANKRD61 (ENSAMEG00000025422) #31	EIF2AK1 (ENSAMEG00000009072) #30	USP42 (ENSAMEG00000006853) #33	CYTH3 (ENSAMEG00000006768) #35	FAM220A (ENSAMEG00000019181)	ENSAMEG00000025057 #36	ENSAMEG00000023754	RAC1 (ENSAMEG00000006764)	DAGLB (ENSAMEG00000006734)
Mustelinae	ANCESTRAL SPECIES	64	ENSGT00510000046986.v.b.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a	ENSGT00940000156486
Ferret	MODERN SPECIES	366	ENSMPUG00000016506	CPSF4 (ENSMPUG00000016508) #8	PTCD1 (ENSMPUG00000016518) #9	BUD31 (ENSMPUG00000016519) #10	PDAP1 (ENSMPUG00000016521) #11	ARPC1B (ENSMPUG00000016522) #12	ENSMPUG00000016523 #14	KPNA7 (ENSMPUG00000016543) #15	SMURF1 (ENSMPUG00000016554) #16	TRRAP (ENSMPUG00000016556) #17	TMEM130 (ENSMPUG00000016558) #18	NPTX2 (ENSMPUG00000016559) #19	ENSMPUG00000016560	BAIAP2L1 (ENSMPUG00000016561) #20	BRI3 (ENSMPUG00000016562) #21	TECPR1 (ENSMPUG00000016564) #22	BHLHA15 (ENSMPUG00000020102)	LMTK2 (ENSMPUG00000016567) #23	ENSMPUG00000016568 #24	ENSMPUG00000016569 #25	ENSMPUG00000016571 #27	PMS2 (ENSMPUG00000016574) #28	AIMP2 (ENSMPUG00000016575) #29	EIF2AK1 (ENSMPUG00000016576) #30	USP42 (ENSMPUG00000016577) #33	CYTH3 (ENSMPUG00000016578) #35	RAC1 (ENSMPUG00000016579)	DAGLB (ENSMPUG00000016581)	KDELR2 (ENSMPUG00000016583)	GRID2IP (ENSMPUG00000016585)	ZDHHC4 (ENSMPUG00000016586)
American mink	MODERN SPECIES	113													NPTX2 (ENSNVIG00000006869) #19	BAIAP2L1 (ENSNVIG00000006833) #20	BRI3 (ENSNVIG00000006807) #21	TECPR1 (ENSNVIG00000006455) #22	BHLHA15 (ENSNVIG00000006444)	LMTK2 (ENSNVIG00000006430) #23	ENSNVIG00000006417 #24	ENSNVIG00000006396 #25	ENSNVIG00000006329 #27	PMS2 (ENSNVIG00000006302) #28	AIMP2 (ENSNVIG00000006284) #29	ANKRD61 (ENSNVIG00000006278) #31	EIF2AK1 (ENSNVIG00000006253) #30	ENSNVIG00000006235	USP42 (ENSNVIG00000006223) #33	CYTH3 (ENSNVIG00000006203) #35	ENSNVIG00000006191	ENSNVIG00000006188 #36	RAC1 (ENSNVIG00000006036)
Canidae	ANCESTRAL SPECIES	3	ENSGT00510000046986.w #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300.w #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B.p.a #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00390000014547.c #36	ENSGT00940000153500.a.a
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00940000153974.A #9	ENSGT00390000014300.w #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B.p.a #15	ENSGT00940000158690 #16	ENSGT00940000161804.c.a.a	ENSGT00940000153096.b.c.b.b.h	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00960000187139	ENSGT00940000153500.a.a	ENSGT00940000156486
Dog	MODERN SPECIES	34	ARPC1B (ENSCAFG00845003541) #12	PTCD1 (ENSCAFG00845003559) #9	BUD31 (ENSCAFG00845003589) #10	PDAP1 (ENSCAFG00845003605) #11	ARPC1A (ENSCAFG00845003616) #13	MYH16 (ENSCAFG00845003682) #14	ENSCAFG00845003829 #15	SMURF1 (ENSCAFG00845003851) #16	ENSCAFG00845003878	ENSCAFG00845003892	TRRAP (ENSCAFG00845003973) #17	TMEM130 (ENSCAFG00845004094) #18	NPTX2 (ENSCAFG00845004136) #19	BAIAP2L1 (ENSCAFG00845009005) #20	BRI3 (ENSCAFG00845009124) #21	TECPR1 (ENSCAFG00845009230) #22	LMTK2 (ENSCAFG00845009531) #23	ENSCAFG00845009599	OCM2 (ENSCAFG00845009625) #24	ENSCAFG00845009703 #25	ENSCAFG00845009924 #27	PMS2 (ENSCAFG00845010093) #28	AIMP2 (ENSCAFG00845010261) #29	EIF2AK1 (ENSCAFG00845010328) #30	ANKRD61 (ENSCAFG00845010423) #31	USP42 (ENSCAFG00845010465) #33	CYTH3 (ENSCAFG00845010607) #35	FAM220A (ENSCAFG00845010882)	ENSCAFG00845010907	RAC1 (ENSCAFG00845010961)	DAGLB (ENSCAFG00845011183)
Dingo	MODERN SPECIES	351	PTCD1 (ENSCAFG00020014480) #9	BUD31 (ENSCAFG00020014486) #10	PDAP1 (ENSCAFG00020014491) #11	ARPC1B (ENSCAFG00020014497) #12	ARPC1A (ENSCAFG00020014569) #13	ENSCAFG00020014574 #14	KPNA7 (ENSCAFG00020014578) #15	SMURF1 (ENSCAFG00020014606) #16	ENSCAFG00020015606	ENSCAFG00020015608	TRRAP (ENSCAFG00020015718) #17	TMEM130 (ENSCAFG00020016766) #18	NPTX2 (ENSCAFG00020016774) #19	BAIAP2L1 (ENSCAFG00020016786) #20	BRI3 (ENSCAFG00020016791) #21	TECPR1 (ENSCAFG00020016803) #22	BHLHA15 (ENSCAFG00020016879)	LMTK2 (ENSCAFG00020016884) #23	ENSCAFG00020016887	ENSCAFG00020016892 #24	ENSCAFG00020016895 #25	ENSCAFG00020016898	PMS2 (ENSCAFG00020016904) #28	AIMP2 (ENSCAFG00020016908) #29	EIF2AK1 (ENSCAFG00020016916) #30	ANKRD61 (ENSCAFG00020016919) #31	USP42 (ENSCAFG00020016923) #33	CYTH3 (ENSCAFG00020016945) #35	FAM220A (ENSCAFG00020017096)	ENSCAFG00020017098	ENSCAFG00020017100 #36
Red fox	MODERN SPECIES	218	PTCD1 (ENSVVUG00000008836) #9	BUD31 (ENSVVUG00000008841) #10	PDAP1 (ENSVVUG00000008843) #11	ARPC1B (ENSVVUG00000008857) #12	ARPC1A (ENSVVUG00000008994) #13	ENSVVUG00000009006 #14	ENSVVUG00000009096 #15	SMURF1 (ENSVVUG00000009130) #16	TRRAP (ENSVVUG00000011404) #17	ENSVVUG00000015052	TMEM130 (ENSVVUG00000015055) #18	ENSVVUG00000015058	NPTX2 (ENSVVUG00000015063) #19	BAIAP2L1 (ENSVVUG00000015091) #20	BRI3 (ENSVVUG00000015104) #21	TECPR1 (ENSVVUG00000015112) #22	BHLHA15 (ENSVVUG00000015125)	LMTK2 (ENSVVUG00000015127) #23	OCM2 (ENSVVUG00000015131) #24	CCZ1 (ENSVVUG00000015134) #25	ENSVVUG00000015144 #27	PMS2 (ENSVVUG00000015191) #28	AIMP2 (ENSVVUG00000015196) #29	EIF2AK1 (ENSVVUG00000015198) #30	ANKRD61 (ENSVVUG00000015203) #31	USP42 (ENSVVUG00000015208) #33	CYTH3 (ENSVVUG00000015297) #35	FAM220A (ENSVVUG00000015524)	ENSVVUG00000015527	ENSVVUG00000015529 #36	RAC1 (ENSVVUG00000015534)
Felidae	ANCESTRAL SPECIES	19	ENSGT00510000046986.v.b.a #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139
Panthera	ANCESTRAL SPECIES	27	ENSGT00510000046986.v.b.a.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000170143	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139
Tiger	MODERN SPECIES	155	ZNF789 (ENSPTIG00000001790)	ENSPTIG00000004326 #7	CPSF4 (ENSPTIG00000005604) #8	PTCD1 (ENSPTIG00000010617) #9	BUD31 (ENSPTIG00000011324) #10	PDAP1 (ENSPTIG00000012964) #11	ARPC1B (ENSPTIG00000014065) #12	ARPC1A (ENSPTIG00000015204) #13	ENSPTIG00000015791 #14	KPNA7 (ENSPTIG00000019265) #15	SMURF1 (ENSPTIG00000019948) #16	ENSPTIG00000016839	TMEM130 (ENSPTIG00000017143) #18	NPTX2 (ENSPTIG00000019675) #19	BAIAP2L1 (ENSPTIG00000020036) #20	TECPR1 (ENSPTIG00000005029) #22	LMTK2 (ENSPTIG00000008096) #23	ENSPTIG00000009441 #24	ENSPTIG00000010995 #25	ENSPTIG00000013267	ENSPTIG00000014426 #27	PMS2 (ENSPTIG00000015503) #28	AIMP2 (ENSPTIG00000018361) #29	EIF2AK1 (ENSPTIG00000019095) #30	ANKRD61 (ENSPTIG00000021190) #31	ENSPTIG00000021548 #33	FAM220A (ENSPTIG00000007251)	RAC1 (ENSPTIG00000002902)	DAGLB (ENSPTIG00000007110)	KDELR2 (ENSPTIG00000009649)	GRID2IP (ENSPTIG00000010978)
Panthera_a	ANCESTRAL SPECIES	27	ENSGT00510000046986.v.b.a.c #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
lion	MODERN SPECIES	16	CPSF4 (ENSPLOG00000022084) #8	PTCD1 (ENSPLOG00000022137) #9	BUD31 (ENSPLOG00000022188) #10	PDAP1 (ENSPLOG00000022211) #11	ARPC1B (ENSPLOG00000022242) #12	ARPC1A (ENSPLOG00000022304) #13	ENSPLOG00000022335 #14	KPNA7 (ENSPLOG00000022405) #15	SMURF1 (ENSPLOG00000022456) #16	TRRAP (ENSPLOG00000022523) #17	TMEM130 (ENSPLOG00000011537) #18	NPTX2 (ENSPLOG00000011785) #19	ENSPLOG00000011906	BAIAP2L1 (ENSPLOG00000011965) #20	BRI3 (ENSPLOG00000012123) #21	TECPR1 (ENSPLOG00000012232) #22	BHLHA15 (ENSPLOG00000012274)	LMTK2 (ENSPLOG00000012296) #23	ENSPLOG00000012444 #24	ENSPLOG00000012512 #25	ENSPLOG00000012710 #27	PMS2 (ENSPLOG00000012941) #28	AIMP2 (ENSPLOG00000013418) #29	EIF2AK1 (ENSPLOG00000013489) #30	ANKRD61 (ENSPLOG00000013627) #31	USP42 (ENSPLOG00000013674) #33	CYTH3 (ENSPLOG00000013721) #35	ENSPLOG00000013780	FAM220A (ENSPLOG00000013819)	ENSPLOG00000013840 #36	ENSPLOG00000013878
leopard	MODERN SPECIES	91	PTCD1 (ENSPPRG00000003478) #9	BUD31 (ENSPPRG00000004354) #10	PDAP1 (ENSPPRG00000007263) #11	ARPC1B (ENSPPRG00000007519) #12	ARPC1A (ENSPPRG00000008068) #13	ENSPPRG00000010473 #14	KPNA7 (ENSPPRG00000011372) #15	SMURF1 (ENSPPRG00000013759) #16	ENSPPRG00000003908	TRRAP (ENSPPRG00000024644) #17	TMEM130 (ENSPPRG00000024166) #18	NPTX2 (ENSPPRG00000024054) #19	ENSPPRG00000023746	BAIAP2L1 (ENSPPRG00000023080) #20	BRI3 (ENSPPRG00000022966) #21	TECPR1 (ENSPPRG00000000441) #22	BHLHA15 (ENSPPRG00000022063)	LMTK2 (ENSPPRG00000001646) #23	ENSPPRG00000001866 #24	ENSPPRG00000003334 #25	ENSPPRG00000004186 #27	PMS2 (ENSPPRG00000005984) #28	ENSPPRG00000006879 #29	ANKRD61 (ENSPPRG00000007144) #31	EIF2AK1 (ENSPPRG00000008945) #30	ENSPPRG00000009316 #33	CYTH3 (ENSPPRG00000010324) #35	FAM220A (ENSPPRG00000010389)	ENSPPRG00000010644 #36	RAC1 (ENSPPRG00000011136)	DAGLB (ENSPPRG00000013174)
Cat	MODERN SPECIES	247	ZNF789 (ENSFCAG00000015072)	ENSFCAG00000037096 #7	CPSF4 (ENSFCAG00000015070) #8	PTCD1 (ENSFCAG00000015069) #9	BUD31 (ENSFCAG00000027449) #10	PDAP1 (ENSFCAG00000015067) #11	ARPC1A (ENSFCAG00000015065) #13	MYH16 (ENSFCAG00000015064) #14	KPNA7 (ENSFCAG00000015063) #15	SMURF1 (ENSFCAG00000015062) #16	TRRAP (ENSFCAG00000015061) #17	TMEM130 (ENSFCAG00000036518) #18	NPTX2 (ENSFCAG00000004394) #19	BAIAP2L1 (ENSFCAG00000000317) #20	BRI3 (ENSFCAG00000045373) #21	TECPR1 (ENSFCAG00000000316) #22	LMTK2 (ENSFCAG00000030546) #23	OCM (ENSFCAG00000000313) #24	ENSFCAG00000031938 #25	ENSFCAG00000018906 #27	PMS2 (ENSFCAG00000008459) #28	AIMP2 (ENSFCAG00000022896) #29	ANKRD61 (ENSFCAG00000027842) #31	EIF2AK1 (ENSFCAG00000008465) #30	USP42 (ENSFCAG00000048499) #33	CYTH3 (ENSFCAG00000024088) #35	FAM220A (ENSFCAG00000053347)	ENSFCAG00000042468 #36	RAC1 (ENSFCAG00000011361)	DAGLB (ENSFCAG00000011362)	KDELR2 (ENSFCAG00000031430)
Laurasiatheria_c	ANCESTRAL SPECIES	12	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Equus	ANCESTRAL SPECIES	22	ENSGT00940000154488.A.b.a.b.a	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a.o #13	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00940000163089.b	ENSGT00940000153500.a.a
Donkey	MODERN SPECIES	5		ENSEASG00005030979 #7	ENSEASG00005002487 #8	PTCD1 (ENSEASG00005002480) #9	BUD31 (ENSEASG00005032549) #10	PDAP1 (ENSEASG00005033136) #11	ARPC1B (ENSEASG00005002462) #12	ENSEASG00005002444 #13	KPNA7 (ENSEASG00005002435) #15	SMURF1 (ENSEASG00005002115) #16	TRRAP (ENSEASG00005001513) #17	TMEM130 (ENSEASG00005001296) #18	NPTX2 (ENSEASG00005001282) #19	BAIAP2L1 (ENSEASG00005001273) #20	ENSEASG00005023687	TECPR1 (ENSEASG00005000888) #22	BHLHA15 (ENSEASG00005000829)	LMTK2 (ENSEASG00005000819) #23	ENSEASG00005000807 #24	ENSEASG00005000796 #25	ENSEASG00005000768 #27	PMS2 (ENSEASG00005000763) #28	AIMP2 (ENSEASG00005000759) #29	EIF2AK1 (ENSEASG00005000749) #30	ANKRD61 (ENSEASG00005000753) #31	USP42 (ENSEASG00005000742) #33	CYTH3 (ENSEASG00005000673) #35	FAM220A (ENSEASG00005035343)	ENSEASG00005000661 #36	ENSEASG00005000651	RAC1 (ENSEASG00005035702)
Horse	MODERN SPECIES	4	ENSECAG00000036787	ATP5MF (ENSECAG00000002088) #7	CPSF4 (ENSECAG00000007525) #8	PTCD1 (ENSECAG00000016617) #9	BUD31 (ENSECAG00000024151) #10	PDAP1 (ENSECAG00000024426) #11	ARPC1B (ENSECAG00000024991) #12	ENSECAG00000050899 #13	KPNA7 (ENSECAG00000000554) #15	SMURF1 (ENSECAG00000017400) #16	TRRAP (ENSECAG00000010540) #17	TMEM130 (ENSECAG00000009541) #18	NPTX2 (ENSECAG00000012370) #19	BAIAP2L1 (ENSECAG00000012734) #20	ENSECAG00000031100 #21	TECPR1 (ENSECAG00000003104) #22	LMTK2 (ENSECAG00000019598) #23	OCM (ENSECAG00000000243) #24	ENSECAG00000011387 #25	ENSECAG00000004548 #27	PMS2 (ENSECAG00000014072) #28	AIMP2 (ENSECAG00000000053) #29	ANKRD61 (ENSECAG00000021190) #31	EIF2AK1 (ENSECAG00000007200) #30	ENSECAG00000054928	USP42 (ENSECAG00000021875) #33	CYTH3 (ENSECAG00000025034) #35	FAM220A (ENSECAG00000038168)	ENSECAG00000037465 #36	ENSECAG00000034396	RAC1 (ENSECAG00000009727)
Chiroptera	ANCESTRAL SPECIES	51												ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Microchiroptera	ANCESTRAL SPECIES	48												ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547.c #36	ENSGT00960000187139	ENSGT00940000153500.a.a
Microbat	MODERN SPECIES	1145	NSG2 (ENSMLUG00000014650)	MSX2 (ENSMLUG00000017046)	DRD1 (ENSMLUG00000017069)	SFXN1 (ENSMLUG00000000202)	HRH2 (ENSMLUG00000007517)	CPLX2 (ENSMLUG00000025060)	ENSMLUG00000005412	SIMC1 (ENSMLUG00000003490)	KIAA1191 (ENSMLUG00000003498)	ARL10 (ENSMLUG00000026666)	NOP16 (ENSMLUG00000003504)	TMEM130 (ENSMLUG00000003206) #18	NPTX2 (ENSMLUG00000030756) #19	BAIAP2L1 (ENSMLUG00000005124) #20	BRI3 (ENSMLUG00000029697) #21	TECPR1 (ENSMLUG00000009865) #22	BHLHA15 (ENSMLUG00000009476)	LMTK2 (ENSMLUG00000009437) #23	ENSMLUG00000009432 #24	ENSMLUG00000025192 #25	ENSMLUG00000009111 #27	PMS2 (ENSMLUG00000003795) #28	AIMP2 (ENSMLUG00000003807) #29	EIF2AK1 (ENSMLUG00000003813) #30	ANKRD61 (ENSMLUG00000003826) #31	USP42 (ENSMLUG00000003835) #33	CYTH3 (ENSMLUG00000003845) #35	RAC1 (ENSMLUG00000009701)	DAGLB (ENSMLUG00000009722)	KDELR2 (ENSMLUG00000009766)	ENSMLUG00000017011
Greater horseshoe bat	MODERN SPECIES	16	C5orf47 (ENSRFEG00010007860)	NSG2 (ENSRFEG00010007915)	MSX2 (ENSRFEG00010007947)	DRD1 (ENSRFEG00010007981)	SFXN1 (ENSRFEG00010007993)	HRH2 (ENSRFEG00010008040)	CPLX2 (ENSRFEG00010008067)	THOC3 (ENSRFEG00010008126)	SIMC1 (ENSRFEG00010008176)	KIAA1191 (ENSRFEG00010008281)	ARL10 (ENSRFEG00010008335)	TMEM130 (ENSRFEG00010008383) #18	NPTX2 (ENSRFEG00010008539) #19	BAIAP2L1 (ENSRFEG00010008602) #20	ENSRFEG00010008631 #21	TECPR1 (ENSRFEG00010008694) #22	BHLHA15 (ENSRFEG00010008759)	LMTK2 (ENSRFEG00010008774) #23	ENSRFEG00010008833 #24	ENSRFEG00010008890 #25	ENSRFEG00010009090 #27	PMS2 (ENSRFEG00010009339) #28	AIMP2 (ENSRFEG00010009618) #29	ANKRD61 (ENSRFEG00010009693) #31	ENSRFEG00010009735	USP42 (ENSRFEG00010009774) #33	CYTH3 (ENSRFEG00010009801) #35	FAM220A (ENSRFEG00010009862)	ENSRFEG00010009875 #36	ENSRFEG00010009899	RAC1 (ENSRFEG00010009950)
Megabat	MODERN SPECIES	1918																TECPR1 (ENSPVAG00000012907) #22	LMTK2 (ENSPVAG00000012904) #23
Atlantogenata	ANCESTRAL SPECIES	21	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00940000153500.a.a	ENSGT00940000156486
Xenarthra	ANCESTRAL SPECIES	97										ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000047886.a #22	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00940000153500.a.a	ENSGT00940000156486	ENSGT00390000004010.a.b.a	ENSGT00940000157625.b	ENSGT00920000149163
Armadillo	MODERN SPECIES	1664							KPNA7 (ENSDNOG00000044061) #15	SMURF1 (ENSDNOG00000047849) #16	ENSDNOG00000048930	TRRAP (ENSDNOG00000007163) #17	TMEM130 (ENSDNOG00000007154) #18	ENSDNOG00000032700	ENSDNOG00000040578	NPTX2 (ENSDNOG00000012420) #19	BAIAP2L1 (ENSDNOG00000039104) #20	TECPR1 (ENSDNOG00000048784) #22	LMTK2 (ENSDNOG00000036745) #23	ENSDNOG00000007139 #24	ENSDNOG00000024536 #25	ENSDNOG00000042571 #27	PMS2 (ENSDNOG00000042543) #28	AIMP2 (ENSDNOG00000043945) #29	ANKRD61 (ENSDNOG00000016956) #31	EIF2AK1 (ENSDNOG00000016950) #30	USP42 (ENSDNOG00000031362) #33	CYTH3 (ENSDNOG00000019655) #35	ENSDNOG00000015574	DAGLB (ENSDNOG00000017587)	KDELR2 (ENSDNOG00000047978)	GRID2IP (ENSDNOG00000048258)	ZDHHC4 (ENSDNOG00000009165)
Afrotheria	ANCESTRAL SPECIES	18	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00940000153500.a.a	ENSGT00940000156486
Afrotheria_a	ANCESTRAL SPECIES	65	ENSGT00510000046986 #7	ENSGT00940000155520 #8	ENSGT00940000153974.A #9	ENSGT00390000014300 #10	ENSGT00390000018509.a #11	ENSGT00950000183183.b.b #12	ENSGT00950000183183.b.a #13	ENSGT00940000160705.C.b #14	ENSGT01050000244891.B #15	ENSGT00940000158690 #16	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000161875 #24	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00940000153500.a.a	ENSGT00940000156486
Elephant	MODERN SPECIES	403	CPSF4 (ENSLAFG00000000159) #8	PTCD1 (ENSLAFG00000002588) #9	ENSLAFG00000012201 #10	PDAP1 (ENSLAFG00000014038) #11	ARPC1B (ENSLAFG00000014031) #12	ARPC1A (ENSLAFG00000014024) #13	ENSLAFG00000008336 #14	KPNA7 (ENSLAFG00000005116) #15	SMURF1 (ENSLAFG00000012470) #16	ENSLAFG00000013536 #17	ENSLAFG00000027562 #17	TMEM130 (ENSLAFG00000030396) #18	NPTX2 (ENSLAFG00000008442) #19	BAIAP2L1 (ENSLAFG00000011959) #20	BRI3 (ENSLAFG00000031280) #21	TECPR1 (ENSLAFG00000021861) #22	BHLHA15 (ENSLAFG00000000139)	LMTK2 (ENSLAFG00000000137) #23	ENSLAFG00000027808 #24	ENSLAFG00000026343 #25	ENSLAFG00000011948 #27	PMS2 (ENSLAFG00000018588) #28	AIMP2 (ENSLAFG00000018590) #29	ANKRD61 (ENSLAFG00000012703) #31	EIF2AK1 (ENSLAFG00000012693) #30	USP42 (ENSLAFG00000013305) #33	ENSLAFG00000028040	CYTH3 (ENSLAFG00000010832) #35	ENSLAFG00000003150	RAC1 (ENSLAFG00000012844)	ENSLAFG00000004986
Hyrax	MODERN SPECIES	4803																TECPR1 (ENSPCAG00000003647) #22	LMTK2 (ENSPCAG00000003527) #23
Tenrec	MODERN SPECIES	8558																ENSETEG00000011987 #22
Marsupialia	ANCESTRAL SPECIES	6	ENSGT00390000017838	ENSGT00940000161956	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547 #36	ENSGT00940000153500.a.a
Marsupialia_b	ANCESTRAL SPECIES	18	ENSGT00390000016895	ENSGT00390000018209.b	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547 #36	ENSGT00940000153500.a.a
Diprotodontia	ANCESTRAL SPECIES	14	ENSGT00390000016895	ENSGT00390000018209.b	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547 #36	ENSGT00940000153500.a.a
Diprotodontia_a	ANCESTRAL SPECIES	13	ENSGT00390000016895	ENSGT00390000018209.b	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547 #36	ENSGT00940000153500.a.a
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1043	ENSVURG00010019419	ENSVURG00010019425	ENSVURG00010019428	ENSVURG00010019435	ENSVURG00010019450	ENSVURG00010019456	ENSVURG00010019475	ENSVURG00010019483	ENSVURG00010019494	ENSVURG00010019512	ENSVURG00010019531 #17	ENSVURG00010019566 #18	ENSVURG00010019583 #19	ENSVURG00010019607 #20	ENSVURG00010019625 #21	ENSVURG00010019640 #22	ENSVURG00010019668	ENSVURG00010019676 #23	ENSVURG00010019693	ENSVURG00010019699	ENSVURG00010019709 #25	ENSVURG00010019734 #27	ENSVURG00010019748	ENSVURG00010019752 #28	ENSVURG00010019767 #29	ENSVURG00010019776 #30	ENSVURG00010019789 #31	ENSVURG00010019798 #33	ENSVURG00010019813 #35	ENSVURG00010019838	ENSVURG00010019849
Common wonbat	MODERN SPECIES	1043	ENSVURG00010017340	ENSVURG00010017349	ENSVURG00010017351	ENSVURG00010017368	ENSVURG00010017386	ENSVURG00010017400	ENSVURG00010017422	ENSVURG00010017430	ENSVURG00010017434	ENSVURG00010017455	ENSVURG00010017472 #17	ENSVURG00010017512 #18	ENSVURG00010017528 #19	ENSVURG00010017543 #20	ENSVURG00010017562 #21	ENSVURG00010017572 #22	ENSVURG00010017604	ENSVURG00010017613 #23	ENSVURG00010017628	ENSVURG00010017631 #24	ENSVURG00010017641 #25	ENSVURG00010017659 #27	ENSVURG00010017664	ENSVURG00010017670 #28	ENSVURG00010017682 #29	ENSVURG00010017687 #30	ENSVURG00010017699 #31	ENSVURG00010017704 #33	ENSVURG00010017709 #33	ENSVURG00010017715 #35	ENSVURG00010017722
koala	MODERN SPECIES	159								ENSPCIG00000013807	TRRAP (ENSPCIG00000013776) #17	ENSPCIG00000037465	ENSPCIG00000032376 #18	NPTX2 (ENSPCIG00000016692) #19	BAIAP2L1 (ENSPCIG00000030300) #20	BRI3 (ENSPCIG00000030298) #21	ENSPCIG00000030294	TECPR1 (ENSPCIG00000030290) #22	BHLHA15 (ENSPCIG00000030288)	LMTK2 (ENSPCIG00000030286) #23	ENSPCIG00000030285	ENSPCIG00000030283	ENSPCIG00000030282 #25	ENSPCIG00000030281 #27	PMS2 (ENSPCIG00000030280) #28	AIMP2 (ENSPCIG00000030279) #29	EIF2AK1 (ENSPCIG00000030277) #30	ANKRD61 (ENSPCIG00000030278) #31	USP42 (ENSPCIG00000030275) #33	CYTH3 (ENSPCIG00000030271) #35	ENSPCIG00000030274	ENSPCIG00000030272	RAC1 (ENSPCIG00000030270)
Wallaby	MODERN SPECIES	10161																TECPR1 (ENSMEUG00000000241) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000014630	ENSSHAG00000031189	ADAP1 (ENSSHAG00000031041)	GET4 (ENSSHAG00000013266)	SUN1 (ENSSHAG00000012971)	DNAAF5 (ENSSHAG00000012309)	PRKAR1B (ENSSHAG00000010512)	ENSSHAG00000026804	ENSSHAG00000031248	ENSSHAG00000015241	ENSSHAG00000027284	ENSSHAG00000000321 #17	NPTX2 (ENSSHAG00000017053) #19	BAIAP2L1 (ENSSHAG00000016126) #20	ENSSHAG00000027321 #21	TECPR1 (ENSSHAG00000015638) #22	BHLHA15 (ENSSHAG00000031719)	ENSSHAG00000024069 #23	ENSSHAG00000014808	ENSSHAG00000014562	ENSSHAG00000014374 #25	ENSSHAG00000014136 #27	PMS2 (ENSSHAG00000013933) #28	AIMP2 (ENSSHAG00000013868) #29	EIF2AK1 (ENSSHAG00000013711) #30	ANKRD61 (ENSSHAG00000013772) #31	USP42 (ENSSHAG00000013089) #33	CYTH3 (ENSSHAG00000023428) #35	ENSSHAG00000012025	RAC1 (ENSSHAG00000011057)	DAGLB (ENSSHAG00000010735)
Opossum	MODERN SPECIES	5	ADAP1 (ENSMODG00000008667)	GET4 (ENSMODG00000008643)	SUN1 (ENSMODG00000008621)	DNAAF5 (ENSMODG00000008601)	ENSMODG00000008582	PRKAR1B (ENSMODG00000008572)	PDGFA (ENSMODG00000036514)	FOXL3 (ENSMODG00000025014)	FAM20C (ENSMODG00000008498)	TRRAP (ENSMODG00000008449) #17	ENSMODG00000028886 #18	NPTX2 (ENSMODG00000008390) #19	ENSMODG00000008380	BAIAP2L1 (ENSMODG00000008375) #20	BRI3 (ENSMODG00000041144) #21	TECPR1 (ENSMODG00000008338) #22	BHLHA15 (ENSMODG00000025044)	LMTK2 (ENSMODG00000008276) #23	ENSMODG00000008249	ENSMODG00000008239	ENSMODG00000008225 #25	ENSMODG00000008200 #27	PMS2 (ENSMODG00000008178) #28	AIMP2 (ENSMODG00000008128) #29	ANKRD61 (ENSMODG00000008105) #31	EIF2AK1 (ENSMODG00000008099) #30	USP42 (ENSMODG00000008055) #33	CYTH3 (ENSMODG00000008046) #35	ENSMODG00000025051 #36	RAC1 (ENSMODG00000007914)	ENSMODG00000007919
Platypus	MODERN SPECIES	11	ENSOANG00000004537	COX19 (ENSOANG00000004538)	ADAP1 (ENSOANG00000006994)	GET4 (ENSOANG00000045227)	SUN1 (ENSOANG00000006996)	DNAAF5 (ENSOANG00000006999)	PRKAR1B (ENSOANG00000006998)	PDGFA (ENSOANG00000007001)	FOXL3 (ENSOANG00000007002)	FAM20C (ENSOANG00000007003)	TRRAP (ENSOANG00000001930) #17	ENSOANG00000001933 #18	NPTX2 (ENSOANG00000001934) #19	BAIAP2L1 (ENSOANG00000001935) #20	BRI3 (ENSOANG00000047574) #21	TECPR1 (ENSOANG00000001936) #22	BHLHA15 (ENSOANG00000001937)	LMTK2 (ENSOANG00000001939) #23	ENSOANG00000001942	ENSOANG00000000763	ENSOANG00000000762 #25	PMS2 (ENSOANG00000001944) #28	AIMP2 (ENSOANG00000043994) #29	EIF2AK1 (ENSOANG00000002795) #30	USP42 (ENSOANG00000003278) #33	CYTH3 (ENSOANG00000003277) #35	ENSOANG00000003276	ENSOANG00000048802	RAC1 (ENSOANG00000045665)	DAGLB (ENSOANG00000003274)	KDELR2 (ENSOANG00000003273)
Sauria	ANCESTRAL SPECIES	12	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT00390000014156
Lepidosauria	ANCESTRAL SPECIES	22	ENSGT00940000167116	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT00390000014156
Episquamata	ANCESTRAL SPECIES	8	ENSGT00940000167116	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547 #36	ENSGT00960000187139
Laterata	ANCESTRAL SPECIES	22	ENSGT00940000167116	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825.i #35	ENSGT00390000014156	ENSGT00390000014547 #36	ENSGT00940000153500.a.a
Argentine black and white tegu	MODERN SPECIES	102		ADAP1 (ENSSMRG00000020105)	GET4 (ENSSMRG00000020104)	SUN1 (ENSSMRG00000020103)	DNAAF5 (ENSSMRG00000020102)	PRKAR1B (ENSSMRG00000020101)	PDGFA (ENSSMRG00000020100)	FOXL3 (ENSSMRG00000020099)	FAM20C (ENSSMRG00000020098)	ENSSMRG00000020084 #17	ENSSMRG00000020083 #17	TMEM130 (ENSSMRG00000020082) #18	NPTX2 (ENSSMRG00000020081) #19	BAIAP2L1 (ENSSMRG00000020080) #20	BRI3 (ENSSMRG00000020079) #21	TECPR1 (ENSSMRG00000020078) #22	BHLHA15 (ENSSMRG00000020077)	LMTK2 (ENSSMRG00000020076) #23	ENSSMRG00000020075	ENSSMRG00000020074	ENSSMRG00000020073 #25	ENSSMRG00000020069 #27	PMS2 (ENSSMRG00000020068) #28	AIMP2 (ENSSMRG00000020067) #29	ANKRD61 (ENSSMRG00000020066) #31	EIF2AK1 (ENSSMRG00000020065) #30	USP42 (ENSSMRG00000020064) #33	CYTH3 (ENSSMRG00000020063) #35	ENSSMRG00000020060	ENSSMRG00000020059 #36	RAC1 (ENSSMRG00000020058)
Common wall lizard	MODERN SPECIES	5	ENSPMRG00000022431	COX19 (ENSPMRG00000022434)	ADAP1 (ENSPMRG00000022443)	GET4 (ENSPMRG00000022464)	SUN1 (ENSPMRG00000022475)	DNAAF5 (ENSPMRG00000022488)	PRKAR1B (ENSPMRG00000022498)	PDGFA (ENSPMRG00000022503)	FOXL3 (ENSPMRG00000022510)	FAM20C (ENSPMRG00000022516)	TRRAP (ENSPMRG00000022547) #17	TMEM130 (ENSPMRG00000022670) #18	NPTX2 (ENSPMRG00000022676) #19	BAIAP2L1 (ENSPMRG00000022679) #20	BRI3 (ENSPMRG00000022688) #21	TECPR1 (ENSPMRG00000022700) #22	BHLHA15 (ENSPMRG00000022708)	LMTK2 (ENSPMRG00000022711) #23	ENSPMRG00000022716	ENSPMRG00000022718	ENSPMRG00000022724 #25	ENSPMRG00000022729	ENSPMRG00000022733 #27	PMS2 (ENSPMRG00000022739) #28	AIMP2 (ENSPMRG00000022742) #29	EIF2AK1 (ENSPMRG00000022745) #30	ANKRD61 (ENSPMRG00000022754) #31	USP42 (ENSPMRG00000022758) #33	ENSPMRG00000022766 #35	ENSPMRG00000022771 #35	ENSPMRG00000022774
Toxicofera	ANCESTRAL SPECIES	14	ENSGT00940000167116	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00950000182951.A.a.a	ENSGT00390000017961.cc.b #17	ENSGT00390000017961.bc #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547 #36	ENSGT00960000187139
Lizard	MODERN SPECIES	1782														BAIAP2L1 (ENSACAG00000001902) #20	BRI3 (ENSACAG00000001948) #21	TECPR1 (ENSACAG00000001975) #22
Elapidae	ANCESTRAL SPECIES	1	ENSGT00940000167116	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00950000182951.A.a.a	ENSGT00390000017961.cc.a #17	ENSGT00390000017961.bc #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381.m #28	ENSGT00390000015826.m.b #29	ENSGT00390000015826.n #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00980000198850
Indian cobra	MODERN SPECIES	15	DHRS7B (ENSNNAG00000016027)	USP22 (ENSNNAG00000015976)	ENSNNAG00000015960	ENSNNAG00000015935	GET4 (ENSNNAG00000015914)	SUN1 (ENSNNAG00000015884)	DNAAF5 (ENSNNAG00000015816)	PRKAR1B (ENSNNAG00000015791)	PDGFA (ENSNNAG00000015774)	ENSNNAG00000015761	ENSNNAG00000015731 #17	ENSNNAG00000015698 #18	NPTX2 (ENSNNAG00000015674) #19	BAIAP2L1 (ENSNNAG00000015635) #20	BRI3 (ENSNNAG00000015632) #21	TECPR1 (ENSNNAG00000015591) #22	BHLHA15 (ENSNNAG00000015579)	LMTK2 (ENSNNAG00000015557) #23	ENSNNAG00000015537	ENSNNAG00000015521	ENSNNAG00000015499 #25	ENSNNAG00000015464 #27	PMS2 (ENSNNAG00000015295) #28	AIMP2 (ENSNNAG00000015266) #29	ANKRD61 (ENSNNAG00000015256) #31	EIF2AK1 (ENSNNAG00000015234) #30	USP42 (ENSNNAG00000015212) #33	ENSNNAG00000015187	ENSNNAG00000015145	RAC1 (ENSNNAG00000015130)	DAGLB (ENSNNAG00000015089)
Elapidae_a	ANCESTRAL SPECIES	3	ENSGT00940000158171	ENSGT00940000156623	ENSGT00390000013910	ENSGT00940000167116	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00950000182951.A.a.a	ENSGT00390000017961.cc.a #17	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381.m #28	ENSGT00390000015826.m.a #29	ENSGT00390000015826.n #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00980000198850
Blue-lipped sea krait	MODERN SPECIES	2355																TECPR1 (ENSLLTG00000009433) #22	BHLHA15 (ENSLLTG00000009419)	LMTK2 (ENSLLTG00000009402) #23
Archelosauria	ANCESTRAL SPECIES	12	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT00390000014156
Archosauria	ANCESTRAL SPECIES	8	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT01040000244002	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00950000184989	ENSGT00940000155825 #35
Aves	ANCESTRAL SPECIES	11	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT01040000244002	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b.w #33	ENSGT00950000184989	ENSGT00940000155825 #35
Neognathae	ANCESTRAL SPECIES	10	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT01040000244002	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b.w #33	ENSGT00950000184989	ENSGT00940000155825 #35
Neognathae_b	ANCESTRAL SPECIES	12	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT01040000244002	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00940000154596.b.w #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT01070000254102
Passeriformes	ANCESTRAL SPECIES	11	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT01040000244002	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00940000154596.b.w #33	ENSGT00950000184989	ENSGT00940000155825 #35	ENSGT00390000014547 #36
Great tit	MODERN SPECIES	5	ADAP1 (ENSPMJG00000017265)	GET4 (ENSPMJG00000017264)	SUN1 (ENSPMJG00000017263)	DNAAF5 (ENSPMJG00000017262)	PRKAR1B (ENSPMJG00000017261)	PDGFA (ENSPMJG00000017260)	FOXL3 (ENSPMJG00000017256)	FAM20C (ENSPMJG00000017254)	ENSPMJG00000017253	ENSPMJG00000017247 #17	ENSPMJG00000017246 #17	TMEM130 (ENSPMJG00000017245) #18	NPTX2 (ENSPMJG00000017244) #19	BAIAP2L1 (ENSPMJG00000017243) #20	BRI3 (ENSPMJG00000017242) #21	TECPR1 (ENSPMJG00000017241) #22	BHLHA15 (ENSPMJG00000017240)	LMTK2 (ENSPMJG00000017238) #23	ENSPMJG00000017237	ENSPMJG00000017236	ENSPMJG00000017235	ENSPMJG00000017234 #25	ENSPMJG00000017233 #27	PMS2 (ENSPMJG00000017189) #28	AIMP2 (ENSPMJG00000017188) #29	EIF2AK1 (ENSPMJG00000017187) #30	ENSPMJG00000017186 #33	ENSPMJG00000017185	CYTH3 (ENSPMJG00000017184) #35	ENSPMJG00000017183 #36	ENSPMJG00000017182
Passeriformes_d	ANCESTRAL SPECIES	11	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750.e	ENSGT00390000015750.f	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT01040000244002	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00940000154596.b.w #33	ENSGT00940000155825 #35	ENSGT00390000014547 #36	ENSGT00940000153500.a.a
Flycatcher	MODERN SPECIES	5	ENSFALG00000026635	GET4 (ENSFALG00000028823)	SUN1 (ENSFALG00000013951)	DNAAF5 (ENSFALG00000013955)	PRKAR1B (ENSFALG00000024672)	PDGFA (ENSFALG00000024884)	ENSFALG00000024004	FOXL3 (ENSFALG00000027671)	FAM20C (ENSFALG00000013961)	ENSFALG00000025226	TRRAP (ENSFALG00000013964) #17	TMEM130 (ENSFALG00000013965) #18	NPTX2 (ENSFALG00000013966) #19	BAIAP2L1 (ENSFALG00000013967) #20	BRI3 (ENSFALG00000013968) #21	TECPR1 (ENSFALG00000013969) #22	BHLHA15 (ENSFALG00000026150)	LMTK2 (ENSFALG00000013970) #23	ENSFALG00000013971	ENSFALG00000013972	ENSFALG00000013973	ENSFALG00000013974 #25	ENSFALG00000013975 #27	PMS2 (ENSFALG00000013976) #28	AIMP2 (ENSFALG00000023978) #29	EIF2AK1 (ENSFALG00000013978) #30	ENSFALG00000013980 #33	CYTH3 (ENSFALG00000013981) #35	ENSFALG00000025194 #36	RAC1 (ENSFALG00000013983)	DAGLB (ENSFALG00000013985)
Passeriformes_g	ANCESTRAL SPECIES	12	ENSGT00940000162649	ENSGT00960000189925	ENSGT00940000155698.A	ENSGT00390000015750.e	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT01040000244002	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00940000154596.b.w #33	ENSGT00940000155825 #35	ENSGT00940000153500.a.a	ENSGT00940000156486
Passeroidea	ANCESTRAL SPECIES	11	ENSGT00940000162649	ENSGT00960000189925	ENSGT00940000155698.A	ENSGT00390000015750.e	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00990000204962	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT01040000244002	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00940000154596.b.w #33	ENSGT00940000155825 #35	ENSGT00940000153500.a.a	ENSGT00940000156486
Common canary	MODERN SPECIES	17	ENSSCAG00000009804	ADAP1 (ENSSCAG00000009806)	ENSSCAG00000009814	SUN1 (ENSSCAG00000009822)	DNAAF5 (ENSSCAG00000009850)	PRKAR1B (ENSSCAG00000009859)	PDGFA (ENSSCAG00000009863)	FOXL3 (ENSSCAG00000009869)	FAM20C (ENSSCAG00000009875)	ENSSCAG00000009904 #17	ENSSCAG00000010093 #17	TMEM130 (ENSSCAG00000010130) #18	NPTX2 (ENSSCAG00000010132) #19	BAIAP2L1 (ENSSCAG00000010136) #20	ENSSCAG00000010139	TECPR1 (ENSSCAG00000010142) #22	BHLHA15 (ENSSCAG00000010147)	LMTK2 (ENSSCAG00000010161) #23	ENSSCAG00000010190	ENSSCAG00000010195	ENSSCAG00000010201	ENSSCAG00000010212 #25	ENSSCAG00000010234	ENSSCAG00000010238 #27	PMS2 (ENSSCAG00000010260) #28	AIMP2 (ENSSCAG00000010433) #29	EIF2AK1 (ENSSCAG00000010434) #30	ENSSCAG00000010437 #33	CYTH3 (ENSSCAG00000010492) #35	RAC1 (ENSSCAG00000010511)	DAGLB (ENSSCAG00000010521)
Zebra finch	MODERN SPECIES	5	ENSTGUG00000025851	ENSTGUG00000008352	ADAP1 (ENSTGUG00000008402)	GET4 (ENSTGUG00000008424)	SUN1 (ENSTGUG00000008442)	DNAAF5 (ENSTGUG00000008484)	PRKAR1B (ENSTGUG00000008496)	PDGFA (ENSTGUG00000025490)	FOXL3 (ENSTGUG00000028582)	FAM20C (ENSTGUG00000008535)	TRRAP (ENSTGUG00000008547) #17	TMEM130 (ENSTGUG00000008611) #18	NPTX2 (ENSTGUG00000008623) #19	BAIAP2L1 (ENSTGUG00000008652) #20	ENSTGUG00000008663	TECPR1 (ENSTGUG00000008666) #22	BHLHA15 (ENSTGUG00000026002)	LMTK2 (ENSTGUG00000008720) #23	ENSTGUG00000008734	ENSTGUG00000026871	ENSTGUG00000018409	ENSTGUG00000008740 #25	ENSTGUG00000023675 #27	PMS2 (ENSTGUG00000008778) #28	AIMP2 (ENSTGUG00000008804) #29	EIF2AK1 (ENSTGUG00000008807) #30	ENSTGUG00000008831 #33	CYTH3 (ENSTGUG00000008849) #35	RAC1 (ENSTGUG00000008876)	DAGLB (ENSTGUG00000008882)	KDELR2 (ENSTGUG00000008903)
Medium ground finch	MODERN SPECIES	22	ENSGFOG00000011530	ENSGFOG00000011550	ADAP1 (ENSGFOG00000011552)	GET4 (ENSGFOG00000011559)	SUN1 (ENSGFOG00000011570)	DNAAF5 (ENSGFOG00000011598)	PRKAR1B (ENSGFOG00000011607)	PDGFA (ENSGFOG00000011612)	FOXL3 (ENSGFOG00000011619)	FAM20C (ENSGFOG00000011628)	TRRAP (ENSGFOG00000011649) #17	TMEM130 (ENSGFOG00000000050) #18	NPTX2 (ENSGFOG00000000058) #19	BAIAP2L1 (ENSGFOG00000000061) #20	BRI3 (ENSGFOG00000000066) #21	TECPR1 (ENSGFOG00000000070) #22	BHLHA15 (ENSGFOG00000000072)	LMTK2 (ENSGFOG00000000075) #23	ENSGFOG00000000082	ENSGFOG00000000083	ENSGFOG00000000088	ENSGFOG00000000096 #25	ENSGFOG00000000110 #27	PMS2 (ENSGFOG00000000145) #28	AIMP2 (ENSGFOG00000000260) #29	EIF2AK1 (ENSGFOG00000000271) #30	ENSGFOG00000000289 #33	CYTH3 (ENSGFOG00000000298) #35	RAC1 (ENSGFOG00000000305)	DAGLB (ENSGFOG00000000312)	KDELR2 (ENSGFOG00000000322)
Neognathae_c	ANCESTRAL SPECIES	14	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00940000154596.b.w #33	ENSGT00940000155825 #35	ENSGT01070000254102	ENSGT00390000014547 #36	ENSGT00940000153500.a.a
Kakapo	MODERN SPECIES	21	ENSSHBG00005006113	ENSSHBG00005006083	ADAP1 (ENSSHBG00005006033)	GET4 (ENSSHBG00005006005)	SUN1 (ENSSHBG00005005727)	DNAAF5 (ENSSHBG00005005614)	PRKAR1B (ENSSHBG00005005592)	PDGFA (ENSSHBG00005005546)	FOXL3 (ENSSHBG00005005505)	FAM20C (ENSSHBG00005005488)	TRRAP (ENSSHBG00005005103) #17	TMEM130 (ENSSHBG00005005018) #18	NPTX2 (ENSSHBG00005005013) #19	BAIAP2L1 (ENSSHBG00005005002) #20	BRI3 (ENSSHBG00005004995) #21	TECPR1 (ENSSHBG00005004982) #22	BHLHA15 (ENSSHBG00005004972)	LMTK2 (ENSSHBG00005004964) #23	ENSSHBG00005004961	ENSSHBG00005004956	ENSSHBG00005004952 #25	ENSSHBG00005004917 #27	PMS2 (ENSSHBG00005004899) #28	AIMP2 (ENSSHBG00005004893) #29	EIF2AK1 (ENSSHBG00005004878) #30	CYTH3 (ENSSHBG00005004871) #35	ENSSHBG00005004837	RAC1 (ENSSHBG00005004829)	DAGLB (ENSSHBG00005004793)	KDELR2 (ENSSHBG00005004759)	OTOA (ENSSHBG00005004742)
Golden eagle	MODERN SPECIES	17	ENSACCG00020014603	COX19 (ENSACCG00020014619)	ADAP1 (ENSACCG00020014631)	GET4 (ENSACCG00020014647)	SUN1 (ENSACCG00020014701)	DNAAF5 (ENSACCG00020014802)	ENSACCG00020014871	PRKAR1B (ENSACCG00020014893)	PDGFA (ENSACCG00020014927)	FAM20C (ENSACCG00020014979)	TRRAP (ENSACCG00020015355) #17	TMEM130 (ENSACCG00020015787) #18	NPTX2 (ENSACCG00020015801) #19	BAIAP2L1 (ENSACCG00020015814) #20	ENSACCG00020015830	TECPR1 (ENSACCG00020015854) #22	BHLHA15 (ENSACCG00020015884)	LMTK2 (ENSACCG00020015896) #23	ENSACCG00020015922	ENSACCG00020015936	ENSACCG00020008783	ENSACCG00020008809 #25	ENSACCG00020008831 #27	PMS2 (ENSACCG00020008879) #28	AIMP2 (ENSACCG00020008909) #29	EIF2AK1 (ENSACCG00020008927) #30	ENSACCG00020008962 #33	CYTH3 (ENSACCG00020008998) #35	ENSACCG00020009023	ENSACCG00020009032 #36	RAC1 (ENSACCG00020009045)
Galloanserae	ANCESTRAL SPECIES	9	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b.w #33	ENSGT00940000155825 #35	ENSGT00390000014547 #36	ENSGT01070000254102
Anatidae	ANCESTRAL SPECIES	7	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830.h	ENSGT00940000155830.g	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b.w #33	ENSGT00940000155825 #35	ENSGT01070000254102	ENSGT00390000014547 #36	ENSGT00940000153500.a.a
Duck	MODERN SPECIES	6	ENSAPLG00000010224	COX19 (ENSAPLG00000020331)	ADAP1 (ENSAPLG00000009732)	GET4 (ENSAPLG00000009577)	SUN1 (ENSAPLG00000008834)	DNAAF5 (ENSAPLG00000008703)	PRKAR1B (ENSAPLG00000007819)	PDGFA (ENSAPLG00000007507)	FOXL3 (ENSAPLG00000007505)	FAM20C (ENSAPLG00000007305)	TRRAP (ENSAPLG00000006552) #17	TMEM130 (ENSAPLG00000006450) #18	NPTX2 (ENSAPLG00000006430) #19	BAIAP2L1 (ENSAPLG00000006154) #20	BRI3 (ENSAPLG00000006151) #21	TECPR1 (ENSAPLG00000005628) #22	LMTK2 (ENSAPLG00000005439) #23	ENSAPLG00000005423	ENSAPLG00000028327	ENSAPLG00000005393	ENSAPLG00000004993 #25	ENSAPLG00000004779 #27	PMS2 (ENSAPLG00000004599) #28	AIMP2 (ENSAPLG00000004525) #29	EIF2AK1 (ENSAPLG00000004173) #30	ANKRD61 (ENSAPLG00000018460) #31	ENSAPLG00000026175 #33	CYTH3 (ENSAPLG00000003580) #35	RAC1 (ENSAPLG00000003568)	DAGLB (ENSAPLG00000003340)	ENSAPLG00000026279
Pink-footed goose	MODERN SPECIES	176					ENSABRG00000005017	DNAAF5 (ENSABRG00000005032)	PRKAR1B (ENSABRG00000005049)	PDGFA (ENSABRG00000005078)	FOXL3 (ENSABRG00000005097)	FAM20C (ENSABRG00000005108)	TRRAP (ENSABRG00000005380) #17	TMEM130 (ENSABRG00000011111) #18	NPTX2 (ENSABRG00000011115) #19	BAIAP2L1 (ENSABRG00000011122) #20	BRI3 (ENSABRG00000011161) #21	TECPR1 (ENSABRG00000011226) #22	BHLHA15 (ENSABRG00000011538)	LMTK2 (ENSABRG00000011547) #23	ENSABRG00000011599	ENSABRG00000011606	ENSABRG00000011620 #25	ENSABRG00000011761 #27	PMS2 (ENSABRG00000011884) #28	AIMP2 (ENSABRG00000012647) #29	EIF2AK1 (ENSABRG00000012654) #30	ENSABRG00000012674 #31	USP42 (ENSABRG00000012713) #33	CYTH3 (ENSABRG00000012839) #35	ENSABRG00000012852	ENSABRG00000012860 #36	RAC1 (ENSABRG00000012870)
Phasianidae	ANCESTRAL SPECIES	10	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b.w #33	ENSGT00940000155366.a	ENSGT00390000009447	ENSGT00910000147704
Japanese quail	MODERN SPECIES	5	COX19 (ENSCJPG00005014126)	ADAP1 (ENSCJPG00005014125)	GET4 (ENSCJPG00005014090)	ENSCJPG00005014086	SUN1 (ENSCJPG00005014072)	DNAAF5 (ENSCJPG00005014065)	PRKAR1B (ENSCJPG00005014063)	PDGFA (ENSCJPG00005014060)	FOXL3 (ENSCJPG00005014052)	FAM20C (ENSCJPG00005014049)	TRRAP (ENSCJPG00005013616) #17	TMEM130 (ENSCJPG00005013598) #18	NPTX2 (ENSCJPG00005013595) #19	BAIAP2L1 (ENSCJPG00005013584) #20	BRI3 (ENSCJPG00005013582) #21	TECPR1 (ENSCJPG00005013580) #22	BHLHA15 (ENSCJPG00005013578)	ENSCJPG00005013576	ENSCJPG00005013574	LMTK2 (ENSCJPG00005013572) #23	ENSCJPG00005013570	ENSCJPG00005013568 #25	ENSCJPG00005013564 #27	PMS2 (ENSCJPG00005013505) #28	AIMP2 (ENSCJPG00005013504) #29	ANKRD61 (ENSCJPG00005013503) #31	EIF2AK1 (ENSCJPG00005013502) #30	ENSCJPG00005013501 #33	LITAF (ENSCJPG00005013499)	SNN (ENSCJPG00005013498)	TXNDC11 (ENSCJPG00005013497)
Phasianidae_b	ANCESTRAL SPECIES	10	ENSGT00940000162649	ENSGT00940000164238	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00990000204962	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b.w #33	ENSGT00940000155366.a	ENSGT00390000009447	ENSGT00910000147704
Chicken	MODERN SPECIES	5	COX19 (ENSGALG00010022326)	ENSGALG00010022321	ADAP1 (ENSGALG00010022304)	GET4 (ENSGALG00010022259)	SUN1 (ENSGALG00010022237)	DNAAF5 (ENSGALG00010022203)	PRKAR1B (ENSGALG00010022184)	PDGFA (ENSGALG00010022164)	FOXL3 (ENSGALG00010022120)	FAM20C (ENSGALG00010022117)	TRRAP (ENSGALG00010022090) #17	TMEM130 (ENSGALG00010022067) #18	NPTX2 (ENSGALG00010022059) #19	BAIAP2L1 (ENSGALG00010022051) #20	ENSGALG00010022034	TECPR1 (ENSGALG00010022021) #22	BHLHA15 (ENSGALG00010021958)	OCM3 (ENSGALG00010021943)	ENSGALG00010021928	OCM1 (ENSGALG00010021918)	LMTK2 (ENSGALG00010021902) #23	CCZ1 (ENSGALG00010021827) #25	ENSGALG00010021794 #27	PMS2 (ENSGALG00010021776) #28	ANKRD61 (ENSGALG00010021771) #31	EIF2AK1 (ENSGALG00010021765) #30	USP42 (ENSGALG00010021756) #33	LITAF (ENSGALG00010021744)	SNN (ENSGALG00010020781)	TXNDC11 (ENSGALG00010020760)	ZC3H7A (ENSGALG00010020712)
Turkey	MODERN SPECIES	7	ENSMGAG00000018120	ENSMGAG00000001208	ENSMGAG00000001273 #33	ENSMGAG00000001262	ENSMGAG00000001399 #29	ANKRD61 (ENSMGAG00000001397) #31	ENSMGAG00000001322 #30	ENSMGAG00000001410 #28	ENSMGAG00000001444 #25	ENSMGAG00000021671	ENSMGAG00000001506	ENSMGAG00000017959	ENSMGAG00000018311	ENSMGAG00000015527	ENSMGAG00000001523 #23	TECPR1 (ENSMGAG00000001540) #22	ENSMGAG00000001571 #20	ENSMGAG00000001643 #19	ENSMGAG00000001657 #18	ENSMGAG00000001667 #17	ENSMGAG00000001726	ENSMGAG00000001733	ENSMGAG00000001759	ENSMGAG00000019164	ENSMGAG00000002058	ENSMGAG00000002073	ENSMGAG00000002197	ENSMGAG00000002172	ENSMGAG00000020713	ENSMGAG00000002239	ENSMGAG00000022488
African ostrich	MODERN SPECIES	918														BAIAP2L1 (ENSSCUG00000015205) #20	ENSSCUG00000015208	TECPR1 (ENSSCUG00000015213) #22	BHLHA15 (ENSSCUG00000015220)	LMTK2 (ENSSCUG00000015228) #23	ENSSCUG00000015238	ENSSCUG00000015241	ENSSCUG00000015246	ENSSCUG00000015249 #25	ENSSCUG00000015254 #27	PMS2 (ENSSCUG00000015258) #28	AIMP2 (ENSSCUG00000015260) #29	EIF2AK1 (ENSSCUG00000015261) #30	ANKRD61 (ENSSCUG00000015264) #31	ENSSCUG00000015268 #33	CYTH3 (ENSSCUG00000015271) #35	RAC1 (ENSSCUG00000015275)	DAGLB (ENSSCUG00000015280)
Australian saltwater crocodile	MODERN SPECIES	46														BAIAP2L1 (ENSCPRG00005004969) #20	BRI3 (ENSCPRG00005004979) #21	TECPR1 (ENSCPRG00005004984) #22	BHLHA15 (ENSCPRG00005004996)	LMTK2 (ENSCPRG00005005004) #23	ENSCPRG00005005008	ENSCPRG00005005012	ENSCPRG00005005024	ENSCPRG00005005048 #25	ENSCPRG00005005130	ENSCPRG00005005131 #27	PMS2 (ENSCPRG00005005175) #28	AIMP2 (ENSCPRG00005005507) #29	EIF2AK1 (ENSCPRG00005005534) #30	ANKRD61 (ENSCPRG00005005545) #31	USP42 (ENSCPRG00005005561) #33	CYTH3 (ENSCPRG00005005598) #35	ENSCPRG00005005757
Cryptodira	ANCESTRAL SPECIES	12	ENSGT00940000164238	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961 #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547 #36
Testudinoidea	ANCESTRAL SPECIES	6	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961.tb #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547 #36
Emydidae	ANCESTRAL SPECIES	12	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00940000157224.s.a	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00940000162800	ENSGT00950000182951.A.a.a	ENSGT00390000017961.tb #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163144	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00940000157605 #30	ENSGT00840000130004 #31	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT01070000254102
Three-toed box turtle	MODERN SPECIES	37	ENSTMTG00000016583	GET4 (ENSTMTG00000016613)	SUN1 (ENSTMTG00000016633)	ENSTMTG00000016793	DNAAF5 (ENSTMTG00000016807)	PRKAR1B (ENSTMTG00000016896)	PDGFA (ENSTMTG00000016922)	FOXL3 (ENSTMTG00000016944)	FAM20C (ENSTMTG00000016981)	ENSTMTG00000017018 #17	ENSTMTG00000017127 #17	TMEM130 (ENSTMTG00000017149) #18	NPTX2 (ENSTMTG00000017178) #19	BAIAP2L1 (ENSTMTG00000017194) #20	BRI3 (ENSTMTG00000017212) #21	TECPR1 (ENSTMTG00000017223) #22	BHLHA15 (ENSTMTG00000017279)	LMTK2 (ENSTMTG00000017283) #23	ENSTMTG00000017314	ENSTMTG00000017329	ENSTMTG00000017346 #25	ENSTMTG00000017382 #27	ENSTMTG00000017429 #28	ENSTMTG00000017435 #28	AIMP2 (ENSTMTG00000017441) #29	EIF2AK1 (ENSTMTG00000017453) #30	ANKRD61 (ENSTMTG00000017473) #31	USP42 (ENSTMTG00000017492) #33	CYTH3 (ENSTMTG00000017525) #35	FAM220A (ENSTMTG00000017673)	ENSTMTG00000017683
painted turtle	MODERN SPECIES	2421	COX19 (ENSCPBG00000020566)	ADAP1 (ENSCPBG00000020562)	GET4 (ENSCPBG00000020559)	SUN1 (ENSCPBG00000020536)	ENSCPBG00000020527	DNAAF5 (ENSCPBG00000020524)	PRKAR1B (ENSCPBG00000020522)	PDGFA (ENSCPBG00000020517)	FOXL3 (ENSCPBG00000020509)	FAM20C (ENSCPBG00000020506)	TRRAP (ENSCPBG00000020088) #17	TMEM130 (ENSCPBG00000020013) #18	NPTX2 (ENSCPBG00000020011) #19	BAIAP2L1 (ENSCPBG00000020006) #20	BRI3 (ENSCPBG00000020004) #21	TECPR1 (ENSCPBG00000020001) #22	BHLHA15 (ENSCPBG00000019998)	LMTK2 (ENSCPBG00000019995) #23	ENSCPBG00000019992	ENSCPBG00000019990	ENSCPBG00000019986 #25	ENSCPBG00000019972 #27	AIMP2 (ENSCPBG00000019964) #29	ANKRD61 (ENSCPBG00000019961) #31	EIF2AK1 (ENSCPBG00000019958) #30	USP42 (ENSCPBG00000019954) #33	CYTH3 (ENSCPBG00000019371) #35	ENSCPBG00000019331	ENSCPBG00000019334 #36	RAC1 (ENSCPBG00000019327)	DAGLB (ENSCPBG00000019318)
Testudinidae	ANCESTRAL SPECIES	13	ENSGT00940000167116	ENSGT00940000162649	ENSGT00390000016895	ENSGT00940000155698.A	ENSGT00390000015750	ENSGT00940000155830	ENSGT00390000005666	ENSGT00940000157513	ENSGT00940000159039	ENSGT00950000182951.A.a.a	ENSGT00390000017961.tb #17	ENSGT00950000183188.A.b #18	ENSGT01060000248591.a.a.a.a #19	ENSGT00940000153560.b.b.a #20	ENSGT00510000048486 #21	ENSGT00510000047886.a #22	ENSGT00940000161824	ENSGT00940000158475 #23	ENSGT00940000165760	ENSGT00940000163861	ENSGT00390000004713 #25	ENSGT00940000159899 #27	ENSGT00940000155381 #28	ENSGT00390000015826 #29	ENSGT00840000130004 #31	ENSGT00940000157605 #30	ENSGT00940000154596.b #33	ENSGT00940000155825 #35	ENSGT00390000014156	ENSGT00390000014547 #36	ENSGT01070000254102
Goode s thornscrub tortoise	MODERN SPECIES	1	ENSGEVG00005008751	ENSGEVG00005008650	COX19 (ENSGEVG00005008616)	ADAP1 (ENSGEVG00005008595)	GET4 (ENSGEVG00005008572)	SUN1 (ENSGEVG00005008400)	DNAAF5 (ENSGEVG00005008246)	PRKAR1B (ENSGEVG00005008095)	PDGFA (ENSGEVG00005007950)	FAM20C (ENSGEVG00005007865)	TRRAP (ENSGEVG00005007612) #17	TMEM130 (ENSGEVG00005007524) #18	NPTX2 (ENSGEVG00005007487) #19	BAIAP2L1 (ENSGEVG00005007420) #20	BRI3 (ENSGEVG00005007397) #21	TECPR1 (ENSGEVG00005007358) #22	LMTK2 (ENSGEVG00005007310) #23	ENSGEVG00005007284	ENSGEVG00005007262	ENSGEVG00005007222 #25	ENSGEVG00005006943 #27	PMS2 (ENSGEVG00005006849) #28	AIMP2 (ENSGEVG00005006828) #29	ANKRD61 (ENSGEVG00005006803) #31	EIF2AK1 (ENSGEVG00005006770) #30	USP42 (ENSGEVG00005006731) #33	CYTH3 (ENSGEVG00005006632) #35	ENSGEVG00005006610 #36	ENSGEVG00005006589	ENSGEVG00005006554	RAC1 (ENSGEVG00005006535)
Abingdon island giant tortoise	MODERN SPECIES	670															NYAP2 (ENSCABG00000003369)	TECPR1 (ENSCABG00000003405) #22	BHLHA15 (ENSCABG00000003663)	LMTK2 (ENSCABG00000003667) #23	ENSCABG00000003674	ENSCABG00000003675	ENSCABG00000003678 #25
Chinese turtle	MODERN SPECIES	264	GET4 (ENSPSIG00000004695)	SUN1 (ENSPSIG00000004554)	DNAAF5 (ENSPSIG00000004368)	PRKAR1B (ENSPSIG00000004363)	PDGFA (ENSPSIG00000004292)	FOXL3 (ENSPSIG00000004256)	FAM20C (ENSPSIG00000004178)	ENSPSIG00000001258	TRRAP (ENSPSIG00000003984) #17	TMEM130 (ENSPSIG00000003848) #18	ENSPSIG00000001250	ENSPSIG00000001243	NPTX2 (ENSPSIG00000003817) #19	BAIAP2L1 (ENSPSIG00000015327) #20	BRI3 (ENSPSIG00000015097) #21	TECPR1 (ENSPSIG00000015002) #22	BHLHA15 (ENSPSIG00000001236)	LMTK2 (ENSPSIG00000014987) #23	ENSPSIG00000014979	ENSPSIG00000014977	ENSPSIG00000014109 #25	ENSPSIG00000013713 #27	PMS2 (ENSPSIG00000013504) #28	AIMP2 (ENSPSIG00000013497) #29	ANKRD61 (ENSPSIG00000001228) #31	EIF2AK1 (ENSPSIG00000013413) #30	USP42 (ENSPSIG00000013406) #33	CYTH3 (ENSPSIG00000012850) #35	ENSPSIG00000012837	RAC1 (ENSPSIG00000012649)	DAGLB (ENSPSIG00000012043)