Glires	ANCESTRAL SPECIES	4	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00910000148800	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35	ENSGT00940000155609 #36
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT01090000261933	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT01090000261933	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35
Kangaroo rat	MODERN SPECIES	322	ENSDORG00000028332 #7	ENSDORG00000027513 #8	ENSDORG00000024387 #9	ENSDORG00000009511 #10	ENSDORG00000023572 #11	Avil (ENSDORG00000007274) #12	Tsfm (ENSDORG00000007272) #13	Eef1akmt3 (ENSDORG00000027331) #14	Mettl1 (ENSDORG00000007270) #15	Cyp27b1 (ENSDORG00000007269) #16	Marchf9 (ENSDORG00000007268) #17	Cdk4 (ENSDORG00000007267) #18	Tspan31 (ENSDORG00000007266) #19	Agap2 (ENSDORG00000007265) #20	Os9 (ENSDORG00000007263) #21	B4galnt1 (ENSDORG00000004816) #22	Slc26a10 (ENSDORG00000027396) #23	Arhgef25 (ENSDORG00000014405) #24	Dtx3 (ENSDORG00000000412) #25	Pip4k2c (ENSDORG00000026517) #26	Kif5a (ENSDORG00000007141) #27	Dctn2 (ENSDORG00000007137) #28	Mbd6 (ENSDORG00000007136) #29	Ddit3 (ENSDORG00000007132) #30	Mars1 (ENSDORG00000007127) #31	Arhgap9 (ENSDORG00000007126) #32	Gli1 (ENSDORG00000007124) #33	Inhbe (ENSDORG00000007123) #34	Inhbc (ENSDORG00000000632) #35	R3hdm2 (ENSDORG00000011462) #36	Stac3 (ENSDORG00000011461) #37
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT01090000261933	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT01090000261933	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT01090000261933	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770.w.b #18	ENSGT00940000154770.w.a #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT01090000261933	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35
Cricetidae_B	ANCESTRAL SPECIES	35	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770.w.a #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT01090000261933	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35
Northern American deer mouse	MODERN SPECIES	9	Tafa2 (ENSPEMG00000012757)	Slc16a7 (ENSPEMG00000011696)	Lrig3 (ENSPEMG00000008787)	Atp23 (ENSPEMG00000007916) #10	Ctdsp2 (ENSPEMG00000029308) #11	Avil (ENSPEMG00000003557) #12	Tsfm (ENSPEMG00000000414) #13	Eef1akmt3 (ENSPEMG00000027288) #14	Mettl1 (ENSPEMG00000030468) #15	Cyp27b1 (ENSPEMG00000016226) #16	Marchf9 (ENSPEMG00000017943) #17	ENSPEMG00000015354 #18	Tspan31 (ENSPEMG00000000054) #19	Agap2 (ENSPEMG00000017050) #20	Os9 (ENSPEMG00000015919) #21	B4galnt1 (ENSPEMG00000015244) #22	ENSPEMG00000025878 #23	ENSPEMG00000013550 #23	Arhgef25 (ENSPEMG00000011625) #24	Dtx3 (ENSPEMG00000010078) #25	Pip4k2c (ENSPEMG00000009463) #26	Kif5a (ENSPEMG00000007193) #27	ENSPEMG00000024880	Dctn2 (ENSPEMG00000003096) #28	Mbd6 (ENSPEMG00000000952) #29	Ddit3 (ENSPEMG00000025876)	Ddit3 (ENSPEMG00000000565) #30	Mars1 (ENSPEMG00000000046) #31	Arhgap9 (ENSPEMG00000018745) #32	Gli1 (ENSPEMG00000018514) #33	Inhbe (ENSPEMG00000028054) #34
Prairie vole	MODERN SPECIES	10	Tafa2 (ENSMOCG00000002084)	Slc16a7 (ENSMOCG00000013757)	Lrig3 (ENSMOCG00000015216)	Atp23 (ENSMOCG00000007960) #10	Ctdsp2 (ENSMOCG00000020720) #11	Avil (ENSMOCG00000012599) #12	Tsfm (ENSMOCG00000006104) #13	Eef1akmt3 (ENSMOCG00000011230) #14	Mettl1 (ENSMOCG00000020233) #15	Cyp27b1 (ENSMOCG00000018353) #16	Marchf9 (ENSMOCG00000002354) #17	ENSMOCG00000008699 #18	Tspan31 (ENSMOCG00000012333) #19	Agap2 (ENSMOCG00000015636) #20	Os9 (ENSMOCG00000004512) #21	B4galnt1 (ENSMOCG00000020319) #22	Slc26a10 (ENSMOCG00000003649) #23	Arhgef25 (ENSMOCG00000013132) #24	Dtx3 (ENSMOCG00000010598) #25	Pip4k2c (ENSMOCG00000014405) #26	Kif5a (ENSMOCG00000004701) #27	Dctn2 (ENSMOCG00000000594) #28	Mbd6 (ENSMOCG00000012812) #29	Ddit3 (ENSMOCG00000002751) #30	Mars1 (ENSMOCG00000010941) #31	Arhgap9 (ENSMOCG00000002227) #32	Gli1 (ENSMOCG00000015523) #33	Inhbe (ENSMOCG00000021734) #34	Inhbc (ENSMOCG00000001463) #35	R3hdm2 (ENSMOCG00000014425) #36	Stac3 (ENSMOCG00000014255) #37
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770.w.a #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35	ENSGT00940000155609 #36	ENSGT00950000183092.a #37
Chinese hamster chok1gshd	MODERN SPECIES	352	Slc16a7 (ENSCGRG00001016918)	Lrig3 (ENSCGRG00001012777)	ENSCGRG00001007637	Atp23 (ENSCGRG00001013234) #10	Ctdsp2 (ENSCGRG00001005659) #11	Avil (ENSCGRG00001012627) #12	TSFM (ENSCGRG00001023000) #13	Eef1akmt3 (ENSCGRG00001022247) #14	Mettl1 (ENSCGRG00001017652) #15	Cyp27b1 (ENSCGRG00001021985) #16	Marchf9 (ENSCGRG00001012220) #17	ENSCGRG00001014084 #18	Tspan31 (ENSCGRG00001020219) #19	Agap2 (ENSCGRG00001013372) #20	Os9 (ENSCGRG00001020659) #21	B4galnt1 (ENSCGRG00001003379) #22	Slc26a10 (ENSCGRG00001023769) #23	Arhgef25 (ENSCGRG00001022612) #24	Dtx3 (ENSCGRG00001000914) #25	Pip4k2c (ENSCGRG00001011872) #26	Kif5a (ENSCGRG00001017636) #27	Dctn2 (ENSCGRG00001015007) #28	Mbd6 (ENSCGRG00001017943) #29	Ddit3 (ENSCGRG00001015590) #30	Mars1 (ENSCGRG00001019238) #31	Arhgap9 (ENSCGRG00001021134) #32	Gli1 (ENSCGRG00001019686) #33	Inhbe (ENSCGRG00001023439) #34	Inhbc (ENSCGRG00001017014) #35	R3hdm2 (ENSCGRG00001017324) #36	Stac3 (ENSCGRG00001021668) #37
Golden Hamster	MODERN SPECIES	710	ENSMAUG00000000577	ENSMAUG00000019840	Tafa2 (ENSMAUG00000016370)	ENSMAUG00000014402	Slc16a7 (ENSMAUG00000013959)	ENSMAUG00000012985	ENSMAUG00000016897 #11	Avil (ENSMAUG00000012739) #12	Tsfm (ENSMAUG00000011705) #13	Eef1akmt3 (ENSMAUG00000010832) #14	Cyp27b1 (ENSMAUG00000008020) #16	Cdk4 (ENSMAUG00000010648) #18	Marchf9 (ENSMAUG00000010248) #17	Agap2 (ENSMAUG00000007077) #20	Os9 (ENSMAUG00000019379) #21	ENSMAUG00000017551 #22	Arhgef25 (ENSMAUG00000016660) #24	Dtx3 (ENSMAUG00000019649) #25	Pip4k2c (ENSMAUG00000019443) #26	Kif5a (ENSMAUG00000013563) #27	Dctn2 (ENSMAUG00000013335) #28	Mbd6 (ENSMAUG00000010881) #29	Mars1 (ENSMAUG00000011482) #31	Arhgap9 (ENSMAUG00000013068) #32	Gli1 (ENSMAUG00000010937) #33	Inhbe (ENSMAUG00000008071) #34	Inhbc (ENSMAUG00000013085) #35	ENSMAUG00000012480	Stac3 (ENSMAUG00000017379) #37	ENSMAUG00000016907	Shmt2 (ENSMAUG00000014511)
Murinae	ANCESTRAL SPECIES	22	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35	ENSGT00940000155609 #36
Mus	ANCESTRAL SPECIES	23	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35	ENSGT00940000155609 #36	ENSGT00950000183092.a #37
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35	ENSGT00940000155609 #36	ENSGT00950000183092.a #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35	ENSGT00940000155609 #36	ENSGT00950000183092.a #37
Mouse	MODERN SPECIES	1	Tafa2 (ENSMUSG00000044071)	Slc16a7 (ENSMUSG00000020102)	Lrig3 (ENSMUSG00000020105)	Atp23 (ENSMUSG00000025436) #10	Ctdsp2 (ENSMUSG00000078429) #11	Avil (ENSMUSG00000025432) #12	Tsfm (ENSMUSG00000040521) #13	Eef1akmt3 (ENSMUSG00000080115) #14	Mettl1 (ENSMUSG00000006732) #15	Cyp27b1 (ENSMUSG00000006724) #16	Marchf9 (ENSMUSG00000040502) #17	Cdk4 (ENSMUSG00000006728) #18	Tspan31 (ENSMUSG00000006736) #19	Agap2 (ENSMUSG00000025422) #20	Os9 (ENSMUSG00000040462) #21	B4galnt1 (ENSMUSG00000006731) #22	Slc26a10 (ENSMUSG00000040441) #23	Arhgef25 (ENSMUSG00000019467) #24	Dtx3 (ENSMUSG00000040415) #25	Pip4k2c (ENSMUSG00000025417) #26	Kif5a (ENSMUSG00000074657) #27	Dctn2 (ENSMUSG00000025410) #28	Mbd6 (ENSMUSG00000025409) #29	Ddit3 (ENSMUSG00000025408) #30	Ddit3 (ENSMUSG00000116429)	Mars1 (ENSMUSG00000040354) #31	Arhgap9 (ENSMUSG00000040345) #32	Gli1 (ENSMUSG00000025407) #33	Inhbe (ENSMUSG00000047492) #34	Inhbc (ENSMUSG00000025405) #35	R3hdm2 (ENSMUSG00000025404) #36
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35	ENSGT00940000155609 #36	ENSGT00950000183092.a #37
Steppe mouse	MODERN SPECIES	1820																B4galnt1 (ENSMSIG00000028723) #22	Slc26a10 (ENSMSIG00000028691) #23	Arhgef25 (ENSMSIG00000028611) #24	Dtx3 (ENSMSIG00000028599) #25	ENSMSIG00000028596	Pip4k2c (ENSMSIG00000028579) #26	ENSMSIG00000028253 #27	Dctn2 (ENSMSIG00000028231) #28
spretus	MODERN SPECIES	1	Tafa2 (MGP_SPRETEiJ_G0016693)	Slc16a7 (MGP_SPRETEiJ_G0016694)	Lrig3 (MGP_SPRETEiJ_G0016695)	Atp23 (MGP_SPRETEiJ_G0016696) #10	Ctdsp2 (MGP_SPRETEiJ_G0016697) #11	Avil (MGP_SPRETEiJ_G0016698) #12	Tsfm (MGP_SPRETEiJ_G0016699) #13	Eef1akmt3 (MGP_SPRETEiJ_G0016700) #14	Mettl1 (MGP_SPRETEiJ_G0016701) #15	Cyp27b1 (MGP_SPRETEiJ_G0016702) #16	Marchf9 (MGP_SPRETEiJ_G0016703) #17	Cdk4 (MGP_SPRETEiJ_G0016704) #18	Tspan31 (MGP_SPRETEiJ_G0016705) #19	Agap2 (MGP_SPRETEiJ_G0016706) #20	Os9 (MGP_SPRETEiJ_G0016707) #21	B4galnt1 (MGP_SPRETEiJ_G0016708) #22	Slc26a10 (MGP_SPRETEiJ_G0016709) #23	Arhgef25 (MGP_SPRETEiJ_G0016710) #24	Dtx3 (MGP_SPRETEiJ_G0016711) #25	Pip4k2c (MGP_SPRETEiJ_G0016712) #26	Kif5a (MGP_SPRETEiJ_G0016713) #27	Dctn2 (MGP_SPRETEiJ_G0016714) #28	Mbd6 (MGP_SPRETEiJ_G0016715) #29	Ddit3 (MGP_SPRETEiJ_G0016716) #30	Mars1 (MGP_SPRETEiJ_G0016717) #31	MGP_SPRETEiJ_G0016718 #32	Gli1 (MGP_SPRETEiJ_G0016719) #33	Inhbe (MGP_SPRETEiJ_G0016720) #34	Inhbc (MGP_SPRETEiJ_G0016721) #35	R3hdm2 (MGP_SPRETEiJ_G0016722) #36	Stac3 (MGP_SPRETEiJ_G0016723) #37
Ryukyu mouse	MODERN SPECIES	1	Tafa2 (MGP_CAROLIEiJ_G0015867)	Slc16a7 (MGP_CAROLIEiJ_G0015868)	Lrig3 (MGP_CAROLIEiJ_G0015869)	Atp23 (MGP_CAROLIEiJ_G0015870) #10	Ctdsp2 (MGP_CAROLIEiJ_G0015871) #11	Avil (MGP_CAROLIEiJ_G0015872) #12	Tsfm (MGP_CAROLIEiJ_G0015873) #13	Eef1akmt3 (MGP_CAROLIEiJ_G0015874) #14	Mettl1 (MGP_CAROLIEiJ_G0015875) #15	Cyp27b1 (MGP_CAROLIEiJ_G0015876) #16	Marchf9 (MGP_CAROLIEiJ_G0015877) #17	Cdk4 (MGP_CAROLIEiJ_G0015878) #18	Tspan31 (MGP_CAROLIEiJ_G0015879) #19	Agap2 (MGP_CAROLIEiJ_G0015880) #20	Os9 (MGP_CAROLIEiJ_G0015881) #21	B4galnt1 (MGP_CAROLIEiJ_G0015882) #22	Slc26a10 (MGP_CAROLIEiJ_G0015883) #23	Arhgef25 (MGP_CAROLIEiJ_G0015884) #24	Dtx3 (MGP_CAROLIEiJ_G0015885) #25	Pip4k2c (MGP_CAROLIEiJ_G0015886) #26	Kif5a (MGP_CAROLIEiJ_G0015887) #27	Dctn2 (MGP_CAROLIEiJ_G0015888) #28	Mbd6 (MGP_CAROLIEiJ_G0015889) #29	Ddit3 (MGP_CAROLIEiJ_G0015890) #30	Mars1 (MGP_CAROLIEiJ_G0015891) #31	MGP_CAROLIEiJ_G0015892 #32	Gli1 (MGP_CAROLIEiJ_G0015893) #33	Inhbe (MGP_CAROLIEiJ_G0015894) #34	Inhbc (MGP_CAROLIEiJ_G0015895) #35	R3hdm2 (MGP_CAROLIEiJ_G0015896) #36	Stac3 (MGP_CAROLIEiJ_G0015897) #37
Shrew mouse	MODERN SPECIES	22	Tafa2 (MGP_PahariEiJ_G0031218)	Slc16a7 (MGP_PahariEiJ_G0031217)	Lrig3 (MGP_PahariEiJ_G0031216)	Atp23 (MGP_PahariEiJ_G0031215) #10	Ctdsp2 (MGP_PahariEiJ_G0031214) #11	Avil (MGP_PahariEiJ_G0031213) #12	Tsfm (MGP_PahariEiJ_G0031212) #13	Eef1akmt3 (MGP_PahariEiJ_G0031211) #14	Mettl1 (MGP_PahariEiJ_G0031210) #15	Cyp27b1 (MGP_PahariEiJ_G0031209) #16	Marchf9 (MGP_PahariEiJ_G0031208) #17	Cdk4 (MGP_PahariEiJ_G0031207) #18	Tspan31 (MGP_PahariEiJ_G0031206) #19	Agap2 (MGP_PahariEiJ_G0031205) #20	Os9 (MGP_PahariEiJ_G0031204) #21	B4galnt1 (MGP_PahariEiJ_G0031203) #22	Slc26a10 (MGP_PahariEiJ_G0031202) #23	Arhgef25 (MGP_PahariEiJ_G0031201) #24	Dtx3 (MGP_PahariEiJ_G0031200) #25	Pip4k2c (MGP_PahariEiJ_G0031199) #26	Kif5a (MGP_PahariEiJ_G0031198) #27	Dctn2 (MGP_PahariEiJ_G0031197) #28	Mbd6 (MGP_PahariEiJ_G0031196) #29	Ddit3 (MGP_PahariEiJ_G0031195) #30	Mars1 (MGP_PahariEiJ_G0031194) #31	MGP_PahariEiJ_G0031193 #32	Gli1 (MGP_PahariEiJ_G0031192) #33	Inhbe (MGP_PahariEiJ_G0031191) #34	Inhbc (MGP_PahariEiJ_G0031190) #35	R3hdm2 (MGP_PahariEiJ_G0031189) #36	Stac3 (MGP_PahariEiJ_G0031188) #37
Rat	MODERN SPECIES	17	Lrig3 (ENSRNOG00000007654)	RGD1564306 (ENSRNOG00000032335)	Atp23 (ENSRNOG00000045629) #10	Ctdsp2 (ENSRNOG00000068220) #11	Avil (ENSRNOG00000050419) #12	Tsfm (ENSRNOG00000048843) #13	Eef1akmt3 (ENSRNOG00000047631) #14	Mettl1 (ENSRNOG00000047895) #15	Cyp27b1 (ENSRNOG00000046214) #16	AABR07057423.1 (ENSRNOG00000046245) #17	Cdk4 (ENSRNOG00000025602) #18	Tspan31 (ENSRNOG00000025592) #19	Agap2 (ENSRNOG00000025584) #20	Os9 (ENSRNOG00000025570) #21	RGD1565117 (ENSRNOG00000033161)	B4galnt1 (ENSRNOG00000004839) #22	Slc26a10 (ENSRNOG00000029465) #23	Arhgef25 (ENSRNOG00000005034) #24	Dtx3 (ENSRNOG00000005129) #25	Pip4k2c (ENSRNOG00000005138) #26	Kif5a (ENSRNOG00000005299) #27	ENSRNOG00000069110	Dctn2 (ENSRNOG00000025481) #28	Mbd6 (ENSRNOG00000006209) #29	Ddit3 (ENSRNOG00000006789) #30	Mars1 (ENSRNOG00000025459) #31	Arhgap9 (ENSRNOG00000006946) #32	Gli1 (ENSRNOG00000025120) #33	Inhbe (ENSRNOG00000007601) #34	Inhbc (ENSRNOG00000007700) #35	R3hdm2 (ENSRNOG00000007801) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1252					Ctdsp2 (ENSNGAG00000016774) #11	Avil (ENSNGAG00000022648) #12	Tsfm (ENSNGAG00000014356) #13	Eef1akmt3 (ENSNGAG00000015023) #14	Mettl1 (ENSNGAG00000013035) #15	Cyp27b1 (ENSNGAG00000016787) #16	Marchf9 (ENSNGAG00000018675) #17	Cdk4 (ENSNGAG00000011709) #18	ENSNGAG00000018815 #19	Agap2 (ENSNGAG00000019298) #20	Os9 (ENSNGAG00000001426) #21	B4galnt1 (ENSNGAG00000010764) #22	Slc26a10 (ENSNGAG00000007258) #23	Arhgef25 (ENSNGAG00000017593) #24	Dtx3 (ENSNGAG00000005639) #25	Pip4k2c (ENSNGAG00000018449) #26	Kif5a (ENSNGAG00000006172) #27	Dctn2 (ENSNGAG00000020864) #28	Mbd6 (ENSNGAG00000004286) #29	ENSNGAG00000017151 #30	Mars1 (ENSNGAG00000018824) #31	Arhgap9 (ENSNGAG00000006996) #32	Gli1 (ENSNGAG00000013962) #33	Inhbe (ENSNGAG00000006351) #34	Inhbc (ENSNGAG00000009424) #35	R3hdm2 (ENSNGAG00000018800) #36	Stac3 (ENSNGAG00000013604) #37
Lesser Egyptian jerboa	MODERN SPECIES	42	ENSJJAG00000011962	ENSJJAG00000003685	Lrig3 (ENSJJAG00000006798)	Ctdsp2 (ENSJJAG00000017246) #11	Avil (ENSJJAG00000016587) #12	Tsfm (ENSJJAG00000012907) #13	Eef1akmt3 (ENSJJAG00000012184) #14	Mettl1 (ENSJJAG00000014500) #15	Cyp27b1 (ENSJJAG00000016596) #16	ENSJJAG00000005635 #18	Tspan31 (ENSJJAG00000011792) #19	Marchf9 (ENSJJAG00000000800) #17	Agap2 (ENSJJAG00000012355) #20	Os9 (ENSJJAG00000011446) #21	ENSJJAG00000008739	B4galnt1 (ENSJJAG00000021764) #22	Slc26a10 (ENSJJAG00000000444) #23	Arhgef25 (ENSJJAG00000020641) #24	Dtx3 (ENSJJAG00000015820) #25	ENSJJAG00000016286 #26	Kif5a (ENSJJAG00000018332) #27	Dctn2 (ENSJJAG00000005539) #28	ENSJJAG00000011275 ##29	Ddit3 (ENSJJAG00000011845) #30	Mars1 (ENSJJAG00000018827) #31	ENSJJAG00000010582 #32	Gli1 (ENSJJAG00000005790) #33	Inhbe (ENSJJAG00000005854) #34	Inhbc (ENSJJAG00000024406) #35	R3hdm2 (ENSJJAG00000010001) #36	Stac3 (ENSJJAG00000004686) #37
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT01090000261933	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b.i #23	ENSGT01070000253775.a.d.b.j #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT01090000261933	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000004428.a.l.a.b	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b.i #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT01090000261933	ENSGT00390000006305.e #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000004428.a.l.a.b	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770.bb #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b.i #23	ENSGT01070000253775.a.d.b.j #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00860000136110	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305.e #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35
Arctic ground squirrel	MODERN SPECIES	197		LRIG3 (ENSUPAG00010017739)	ENSUPAG00010017731	ENSUPAG00010017722 #10	CTDSP2 (ENSUPAG00010017709) #11	AVIL (ENSUPAG00010017677) #12	TSFM (ENSUPAG00010017664) #13	EEF1AKMT3 (ENSUPAG00010017654) #14	METTL1 (ENSUPAG00010017651) #15	CYP27B1 (ENSUPAG00010017630) #16	MARCHF9 (ENSUPAG00010017626) #17	ENSUPAG00010017617 #18	TSPAN31 (ENSUPAG00010017607) #19	AGAP2 (ENSUPAG00010017556) #20	OS9 (ENSUPAG00010017513) #21	B4GALNT1 (ENSUPAG00010017501) #22	ENSUPAG00010017441 #23	ARHGEF25 (ENSUPAG00010017411) #24	DTX3 (ENSUPAG00010017398) #25	PIP4K2C (ENSUPAG00010017376) #26	ENSUPAG00010017369	KIF5A (ENSUPAG00010017316) #27	DCTN2 (ENSUPAG00010017296) #28	MBD6 (ENSUPAG00010017279) #29	ENSUPAG00010017275 #30	MARS1 (ENSUPAG00010017243) #31	GLI1 (ENSUPAG00010017222) #33	ARHGAP9 (ENSUPAG00010017207) #32	INHBE (ENSUPAG00010017202) #34	INHBC (ENSUPAG00010017199) #35	R3HDM2 (ENSUPAG00010016815) #36
Squirrel	MODERN SPECIES	246	LRIG3 (ENSSTOG00000002283)	ATP23 (ENSSTOG00000001187) #10	CTDSP2 (ENSSTOG00000023365) #11	AVIL (ENSSTOG00000001162) #12	EEF1AKMT3 (ENSSTOG00000024160) #14	TSFM (ENSSTOG00000001159) #13	METTL1 (ENSSTOG00000001154) #15	CYP27B1 (ENSSTOG00000001146) #16	ENSSTOG00000001142 #18	TSPAN31 (ENSSTOG00000001138) #19	MARCHF9 (ENSSTOG00000021963) #17	AGAP2 (ENSSTOG00000001113) #20	OS9 (ENSSTOG00000001100) #21	ENSSTOG00000031108	ENSSTOG00000014458	B4GALNT1 (ENSSTOG00000001087) #22	ENSSTOG00000020554 #23	ARHGEF25 (ENSSTOG00000001189) #24	DTX3 (ENSSTOG00000026285) #25	PIP4K2C (ENSSTOG00000001081) #26	KIF5A (ENSSTOG00000001164) #27	DCTN2 (ENSSTOG00000001156) #28	ENSSTOG00000001143 #29	ENSSTOG00000019858 #30	MARS1 (ENSSTOG00000001128) #31	ARHGAP9 (ENSSTOG00000001107) #32	GLI1 (ENSSTOG00000020366) #33	INHBE (ENSSTOG00000025066) #34	INHBC (ENSSTOG00000001097) #35	ENSSTOG00000013424 #36	STAC3 (ENSSTOG00000013409) #37
Alpin marmot	MODERN SPECIES	11	LRIG3 (ENSMMMG00000010368)	ENSMMMG00000010406	ATP23 (ENSMMMG00000010425) #10	CTDSP2 (ENSMMMG00000010438) #11	AVIL (ENSMMMG00000010450) #12	TSFM (ENSMMMG00000010500) #13	EEF1AKMT3 (ENSMMMG00000010507) #14	METTL1 (ENSMMMG00000010517) #15	CYP27B1 (ENSMMMG00000010536) #16	MARCHF9 (ENSMMMG00000010562) #17	CDK4 (ENSMMMG00000010571) #18	TSPAN31 (ENSMMMG00000010594) #19	AGAP2 (ENSMMMG00000010604) #20	OS9 (ENSMMMG00000010642) #21	ENSMMMG00000010692	B4GALNT1 (ENSMMMG00000010698) #22	ENSMMMG00000010726 #23	ARHGEF25 (ENSMMMG00000010788) #24	DTX3 (ENSMMMG00000010875) #25	PIP4K2C (ENSMMMG00000010891) #26	KIF5A (ENSMMMG00000010904) #27	ENSMMMG00000011019	DCTN2 (ENSMMMG00000011027) #28	MBD6 (ENSMMMG00000011054) #29	ENSMMMG00000011091	ENSMMMG00000011094 #30	MARS1 (ENSMMMG00000011099) #31	ARHGAP9 (ENSMMMG00000011136) #32	GLI1 (ENSMMMG00000011156) #33	INHBE (ENSMMMG00000011176) #34	INHBC (ENSMMMG00000011180) #35
Eurasian red squirrel	MODERN SPECIES	14	TAFA2 (ENSSVLG00005017243)	SLC16A7 (ENSSVLG00005017200)	LRIG3 (ENSSVLG00005016786)	ATP23 (ENSSVLG00005016743) #10	CTDSP2 (ENSSVLG00005016687) #11	AVIL (ENSSVLG00005016505) #12	ENSSVLG00005016349 #13	EEF1AKMT3 (ENSSVLG00005016307) #14	METTL1 (ENSSVLG00005016268) #15	CYP27B1 (ENSSVLG00005016149) #16	MARCHF9 (ENSSVLG00005016118) #17	CDK4 (ENSSVLG00005015967) #18	TSPAN31 (ENSSVLG00005015825) #19	AGAP2 (ENSSVLG00005015393) #20	OS9 (ENSSVLG00005015079) #21	B4GALNT1 (ENSSVLG00005014897) #22	ENSSVLG00005014760 #23	ENSSVLG00005014611 #23	ARHGEF25 (ENSSVLG00005014310) #24	DTX3 (ENSSVLG00005014198) #25	PIP4K2C (ENSSVLG00005014089) #26	KIF5A (ENSSVLG00005013715) #27	DCTN2 (ENSSVLG00005013297) #28	MBD6 (ENSSVLG00005013192) #29	DDIT3 (ENSSVLG00005013130) #30	MARS1 (ENSSVLG00005012921) #31	ARHGAP9 (ENSSVLG00005011907) #32	GLI1 (ENSSVLG00005011547) #33	INHBE (ENSSVLG00005011485) #34	INHBC (ENSSVLG00005011429) #35	R3HDM2 (ENSSVLG00005011028) #36
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35	ENSGT00940000155609 #36	ENSGT00950000183092.a #37
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000049232	ENSHGLG00000000518	ENSHGLG00000039977 #10	CTDSP2 (ENSHGLG00000005482) #11	AVIL (ENSHGLG00000006939) #12	TSFM (ENSHGLG00000035817) #13	EEF1AKMT3 (ENSHGLG00000014041) #14	METTL1 (ENSHGLG00000040341) #15	CYP27B1 (ENSHGLG00000018056) #16	MARCHF9 (ENSHGLG00000031879) #17	CDK4 (ENSHGLG00000034505) #18	TSPAN31 (ENSHGLG00000009305) #19	AGAP2 (ENSHGLG00000009759) #20	OS9 (ENSHGLG00000018868) #21	ENSHGLG00000032575	B4GALNT1 (ENSHGLG00000016963) #22	ENSHGLG00000015674 #23	ENSHGLG00000044481	ENSHGLG00000035780 ##23	ARHGEF25 (ENSHGLG00000018169) #24	DTX3 (ENSHGLG00000033032) #25	PIP4K2C (ENSHGLG00000016024) #26	ENSHGLG00000043824	DCTN2 (ENSHGLG00000013797) #28	ENSHGLG00000047970 #29	ENSHGLG00000041807	MARS1 (ENSHGLG00000013493) #31	INHBE (ENSHGLG00000032463) #34	ENSHGLG00000042046	NDUFA4L2 (ENSHGLG00000045559)	ENSHGLG00000050142
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35	ENSGT00940000155609 #36	ENSGT00950000183092.a #37
Guinea pig	MODERN SPECIES	9	TAFA2 (ENSCPOG00000035228)	SLC16A7 (ENSCPOG00000010219)	LRIG3 (ENSCPOG00000011502)	ATP23 (ENSCPOG00000039300) #10	CTDSP2 (ENSCPOG00000039281) #11	AVIL (ENSCPOG00000012226) #12	TSFM (ENSCPOG00000037732) #13	EEF1AKMT3 (ENSCPOG00000011497) #14	METTL1 (ENSCPOG00000000066) #15	CYP27B1 (ENSCPOG00000019603) #16	MARCHF9 (ENSCPOG00000002671) #17	CDK4 (ENSCPOG00000033131) #18	TSPAN31 (ENSCPOG00000011494) #19	AGAP2 (ENSCPOG00000022267) #20	OS9 (ENSCPOG00000002667) #21	B4GALNT1 (ENSCPOG00000003202) #22	ENSCPOG00000033620 #23	ARHGEF25 (ENSCPOG00000020097) #24	PIP4K2C (ENSCPOG00000022071) #26	KIF5A (ENSCPOG00000012882) #27	DCTN2 (ENSCPOG00000012879) #28	MBD6 (ENSCPOG00000012873) #29	DDIT3 (ENSCPOG00000012871) #30	MARS1 (ENSCPOG00000012866) #31	ARHGAP9 (ENSCPOG00000014343) #32	GLI1 (ENSCPOG00000005414) #33	INHBE (ENSCPOG00000031115) #34	INHBC (ENSCPOG00000033593) #35	R3HDM2 (ENSCPOG00000009217) #36	STAC3 (ENSCPOG00000006200) #37	NDUFA4L2 (ENSCPOG00000035802)
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT00940000161214	ENSGT00940000157309	ENSGT00940000157098	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35	ENSGT00940000155609 #36	ENSGT00950000183092.a #37
Degu	MODERN SPECIES	327	ENSODEG00000018814	ENSODEG00000002068	ATP23 (ENSODEG00000002049) #10	ENSODEG00000002035	ENSODEG00000002015 #11	AVIL (ENSODEG00000001940) #12	TSFM (ENSODEG00000001882) #13	EEF1AKMT3 (ENSODEG00000001854) #14	METTL1 (ENSODEG00000001799) #15	CYP27B1 (ENSODEG00000001745) #16	MARCHF9 (ENSODEG00000001713) #17	ENSODEG00000001702 #18	TSPAN31 (ENSODEG00000001691) #19	AGAP2 (ENSODEG00000001675) #20	OS9 (ENSODEG00000001586) #21	B4GALNT1 (ENSODEG00000002156) #22	ENSODEG00000002108 #23	ARHGEF25 (ENSODEG00000002032) #24	DTX3 (ENSODEG00000001975) #25	PIP4K2C (ENSODEG00000001958) #26	KIF5A (ENSODEG00000001884) #27	DCTN2 (ENSODEG00000001844) #28	ENSODEG00000001830 #29	ENSODEG00000001814 #29	DDIT3 (ENSODEG00000001801) #30	MARS1 (ENSODEG00000001752) #31	ARHGAP9 (ENSODEG00000001619) #32	GLI1 (ENSODEG00000001558) #33	INHBE (ENSODEG00000001543) #34	INHBC (ENSODEG00000001532) #35	ENSODEG00000001520 #36
Long-tailed chinchilla	MODERN SPECIES	165	TAFA2 (ENSCLAG00000015199)	SLC16A7 (ENSCLAG00000011812)	LRIG3 (ENSCLAG00000010704)	ATP23 (ENSCLAG00000010629) #10	CTDSP2 (ENSCLAG00000015950) #11	AVIL (ENSCLAG00000009924) #12	TSFM (ENSCLAG00000009226) #13	EEF1AKMT3 (ENSCLAG00000012713) #14	METTL1 (ENSCLAG00000014968) #15	CYP27B1 (ENSCLAG00000013845) #16	TSPAN31 (ENSCLAG00000013511) #19	CDK4 (ENSCLAG00000012995) #18	MARCHF9 (ENSCLAG00000012609) #17	AGAP2 (ENSCLAG00000009332) #20	OS9 (ENSCLAG00000010151) #21	B4GALNT1 (ENSCLAG00000009160) #22	ENSCLAG00000011703 #23	ARHGEF25 (ENSCLAG00000010120) #24	DTX3 (ENSCLAG00000008560) #25	PIP4K2C (ENSCLAG00000012549) #26	KIF5A (ENSCLAG00000011917) #27	DCTN2 (ENSCLAG00000010761) #28	MBD6 (ENSCLAG00000010083) #29	DDIT3 (ENSCLAG00000009376) #30	MARS1 (ENSCLAG00000012164) #31	ARHGAP9 (ENSCLAG00000015213) #32	GLI1 (ENSCLAG00000010833) #33	INHBE (ENSCLAG00000013199) #34	INHBC (ENSCLAG00000015051) #35	R3HDM2 (ENSCLAG00000011997) #36	STAC3 (ENSCLAG00000017371) #37
Lagomorpha	ANCESTRAL SPECIES	87			ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00910000148800	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #31	ENSGT00950000182860.a.b.a #32	ENSGT00940000160235 #33	ENSGT00940000162107 #34	ENSGT00940000160065 #35	ENSGT00940000155609 #36	ENSGT00950000183092.a #37
Rabbit	MODERN SPECIES	447	LRIG3 (ENSOCUG00000015598)	ENSOCUG00000036349	ENSOCUG00000031070	ENSOCUG00000002411	ATP23 (ENSOCUG00000001951) #10	CTDSP2 (ENSOCUG00000012533) #11	ENSOCUG00000037733	AVIL (ENSOCUG00000012517) #12	TSFM (ENSOCUG00000012512) #13	METTL1 (ENSOCUG00000012498) #15	CYP27B1 (ENSOCUG00000012486) #16	CDK4 (ENSOCUG00000012474) #18	TSPAN31 (ENSOCUG00000012465) #19	AGAP2 (ENSOCUG00000001304) #20	OS9 (ENSOCUG00000024515) #21	B4GALNT1 (ENSOCUG00000014121) #22	ENSOCUG00000014113 #23	DTX3 (ENSOCUG00000000915) #25	PIP4K2C (ENSOCUG00000000916) #26	ENSOCUG00000031292	KIF5A (ENSOCUG00000011273) #27	DCTN2 (ENSOCUG00000011262) #28	MBD6 (ENSOCUG00000011255) #29	DDIT3 (ENSOCUG00000023877) #30	MARS1 (ENSOCUG00000007373) #31	ARHGAP9 (ENSOCUG00000022807) #32	GLI1 (ENSOCUG00000011128) #33	INHBE (ENSOCUG00000007382) #34	INHBC (ENSOCUG00000007380) #35	R3HDM2 (ENSOCUG00000013258) #36	STAC3 (ENSOCUG00000013251) #37
Pika	MODERN SPECIES	3584						CTDSP2 (ENSOPRG00000006705) #11	AVIL (ENSOPRG00000006677) #12	TSFM (ENSOPRG00000006670) #13	EEF1AKMT3 (ENSOPRG00000006664) #14	METTL1 (ENSOPRG00000006660) #15	CYP27B1 (ENSOPRG00000006649) #16	MARCHF9 (ENSOPRG00000006640) #17	CDK4 (ENSOPRG00000006631) #18	TSPAN31 (ENSOPRG00000006622) #19	OS9 (ENSOPRG00000006604) #21	B4GALNT1 (ENSOPRG00000006593) #22	ARHGEF25 (ENSOPRG00000006581) #24	DTX3 (ENSOPRG00000006576) #25	PIP4K2C (ENSOPRG00000006570) #26	KIF5A (ENSOPRG00000006555) #27	DCTN2 (ENSOPRG00000006544) #28	MBD6 (ENSOPRG00000006533) #29	DDIT3 (ENSOPRG00000006529) #30	MARS1 (ENSOPRG00000006518) #31	ARHGAP9 (ENSOPRG00000006501) #32	GLI1 (ENSOPRG00000006483) #33	INHBE (ENSOPRG00000006480) #34	INHBC (ENSOPRG00000006476) #35