Murinae	ANCESTRAL SPECIES	22	ENSGT00940000161214 #7	ENSGT00940000157309 #8	ENSGT00940000157098 #9	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00860000136110	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #32	ENSGT00950000182860.a.b.a #33	ENSGT00940000160235 #34	ENSGT00940000162107 #35	ENSGT00940000160065 #36	ENSGT00940000155609 #37
Mus	ANCESTRAL SPECIES	23	ENSGT00940000161214 #7	ENSGT00940000157309 #8	ENSGT00940000157098 #9	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #32	ENSGT00950000182860.a.b.a #33	ENSGT00940000160235 #34	ENSGT00940000162107 #35	ENSGT00940000160065 #36	ENSGT00940000155609 #37	ENSGT00950000183092.a
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000161214 #7	ENSGT00940000157309 #8	ENSGT00940000157098 #9	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #32	ENSGT00950000182860.a.b.a #33	ENSGT00940000160235 #34	ENSGT00940000162107 #35	ENSGT00940000160065 #36	ENSGT00940000155609 #37	ENSGT00950000183092.a
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000161214 #7	ENSGT00940000157309 #8	ENSGT00940000157098 #9	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #32	ENSGT00950000182860.a.b.a #33	ENSGT00940000160235 #34	ENSGT00940000162107 #35	ENSGT00940000160065 #36	ENSGT00940000155609 #37	ENSGT00950000183092.a
Mouse	MODERN SPECIES	1	Tafa2 (ENSMUSG00000044071) #7	Slc16a7 (ENSMUSG00000020102) #8	Lrig3 (ENSMUSG00000020105) #9	Atp23 (ENSMUSG00000025436) #10	Ctdsp2 (ENSMUSG00000078429) #11	Avil (ENSMUSG00000025432) #12	Tsfm (ENSMUSG00000040521) #13	Eef1akmt3 (ENSMUSG00000080115) #14	Mettl1 (ENSMUSG00000006732) #15	Cyp27b1 (ENSMUSG00000006724) #16	Marchf9 (ENSMUSG00000040502) #17	Cdk4 (ENSMUSG00000006728) #18	Tspan31 (ENSMUSG00000006736) #19	Agap2 (ENSMUSG00000025422) #20	Os9 (ENSMUSG00000040462) #21	B4galnt1 (ENSMUSG00000006731) #22	Slc26a10 (ENSMUSG00000040441) #23	Arhgef25 (ENSMUSG00000019467) #24	Dtx3 (ENSMUSG00000040415) #25	Pip4k2c (ENSMUSG00000025417) #26	Kif5a (ENSMUSG00000074657) #27	Dctn2 (ENSMUSG00000025410) #28	Mbd6 (ENSMUSG00000025409) #29	Ddit3 (ENSMUSG00000025408) #30	Ddit3 (ENSMUSG00000116429) #31	Mars1 (ENSMUSG00000040354) #32	Arhgap9 (ENSMUSG00000040345) #33	Gli1 (ENSMUSG00000025407) #34	Inhbe (ENSMUSG00000047492) #35	Inhbc (ENSMUSG00000025405) #36	R3hdm2 (ENSMUSG00000025404) #37
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000161214 #7	ENSGT00940000157309 #8	ENSGT00940000157098 #9	ENSGT00390000010948 #10	ENSGT01040000240451.a.b.a #11	ENSGT00940000159587 #12	ENSGT00390000016293 #13	ENSGT00940000161297 #14	ENSGT00390000017840 #15	ENSGT00950000182905.a.a.b #16	ENSGT00940000158208 #17	ENSGT00940000154770 #18	ENSGT00940000160351 #19	ENSGT00940000158956 #20	ENSGT00530000063603.A #21	ENSGT00390000006679.a #22	ENSGT01070000253775.a.d.b #23	ENSGT00940000160422 #24	ENSGT00940000161404 #25	ENSGT00940000156890.a.a #26	ENSGT00940000159439 #27	ENSGT00390000003427 #28	ENSGT00530000064137.a.a #29	ENSGT00390000006305 #30	ENSGT00550000075017 #32	ENSGT00950000182860.a.b.a #33	ENSGT00940000160235 #34	ENSGT00940000162107 #35	ENSGT00940000160065 #36	ENSGT00940000155609 #37	ENSGT00950000183092.a
Steppe mouse	MODERN SPECIES	1820																B4galnt1 (ENSMSIG00000028723) #22	Slc26a10 (ENSMSIG00000028691) #23	Arhgef25 (ENSMSIG00000028611) #24	Dtx3 (ENSMSIG00000028599) #25	ENSMSIG00000028596	Pip4k2c (ENSMSIG00000028579) #26	ENSMSIG00000028253 #27	Dctn2 (ENSMSIG00000028231) #28
spretus	MODERN SPECIES	1	Tafa2 (MGP_SPRETEiJ_G0016693) #7	Slc16a7 (MGP_SPRETEiJ_G0016694) #8	Lrig3 (MGP_SPRETEiJ_G0016695) #9	Atp23 (MGP_SPRETEiJ_G0016696) #10	Ctdsp2 (MGP_SPRETEiJ_G0016697) #11	Avil (MGP_SPRETEiJ_G0016698) #12	Tsfm (MGP_SPRETEiJ_G0016699) #13	Eef1akmt3 (MGP_SPRETEiJ_G0016700) #14	Mettl1 (MGP_SPRETEiJ_G0016701) #15	Cyp27b1 (MGP_SPRETEiJ_G0016702) #16	Marchf9 (MGP_SPRETEiJ_G0016703) #17	Cdk4 (MGP_SPRETEiJ_G0016704) #18	Tspan31 (MGP_SPRETEiJ_G0016705) #19	Agap2 (MGP_SPRETEiJ_G0016706) #20	Os9 (MGP_SPRETEiJ_G0016707) #21	B4galnt1 (MGP_SPRETEiJ_G0016708) #22	Slc26a10 (MGP_SPRETEiJ_G0016709) #23	Arhgef25 (MGP_SPRETEiJ_G0016710) #24	Dtx3 (MGP_SPRETEiJ_G0016711) #25	Pip4k2c (MGP_SPRETEiJ_G0016712) #26	Kif5a (MGP_SPRETEiJ_G0016713) #27	Dctn2 (MGP_SPRETEiJ_G0016714) #28	Mbd6 (MGP_SPRETEiJ_G0016715) #29	Ddit3 (MGP_SPRETEiJ_G0016716) #30	Mars1 (MGP_SPRETEiJ_G0016717) #32	MGP_SPRETEiJ_G0016718 #33	Gli1 (MGP_SPRETEiJ_G0016719) #34	Inhbe (MGP_SPRETEiJ_G0016720) #35	Inhbc (MGP_SPRETEiJ_G0016721) #36	R3hdm2 (MGP_SPRETEiJ_G0016722) #37	Stac3 (MGP_SPRETEiJ_G0016723)
Ryukyu mouse	MODERN SPECIES	1	Tafa2 (MGP_CAROLIEiJ_G0015867) #7	Slc16a7 (MGP_CAROLIEiJ_G0015868) #8	Lrig3 (MGP_CAROLIEiJ_G0015869) #9	Atp23 (MGP_CAROLIEiJ_G0015870) #10	Ctdsp2 (MGP_CAROLIEiJ_G0015871) #11	Avil (MGP_CAROLIEiJ_G0015872) #12	Tsfm (MGP_CAROLIEiJ_G0015873) #13	Eef1akmt3 (MGP_CAROLIEiJ_G0015874) #14	Mettl1 (MGP_CAROLIEiJ_G0015875) #15	Cyp27b1 (MGP_CAROLIEiJ_G0015876) #16	Marchf9 (MGP_CAROLIEiJ_G0015877) #17	Cdk4 (MGP_CAROLIEiJ_G0015878) #18	Tspan31 (MGP_CAROLIEiJ_G0015879) #19	Agap2 (MGP_CAROLIEiJ_G0015880) #20	Os9 (MGP_CAROLIEiJ_G0015881) #21	B4galnt1 (MGP_CAROLIEiJ_G0015882) #22	Slc26a10 (MGP_CAROLIEiJ_G0015883) #23	Arhgef25 (MGP_CAROLIEiJ_G0015884) #24	Dtx3 (MGP_CAROLIEiJ_G0015885) #25	Pip4k2c (MGP_CAROLIEiJ_G0015886) #26	Kif5a (MGP_CAROLIEiJ_G0015887) #27	Dctn2 (MGP_CAROLIEiJ_G0015888) #28	Mbd6 (MGP_CAROLIEiJ_G0015889) #29	Ddit3 (MGP_CAROLIEiJ_G0015890) #30	Mars1 (MGP_CAROLIEiJ_G0015891) #32	MGP_CAROLIEiJ_G0015892 #33	Gli1 (MGP_CAROLIEiJ_G0015893) #34	Inhbe (MGP_CAROLIEiJ_G0015894) #35	Inhbc (MGP_CAROLIEiJ_G0015895) #36	R3hdm2 (MGP_CAROLIEiJ_G0015896) #37	Stac3 (MGP_CAROLIEiJ_G0015897)
Shrew mouse	MODERN SPECIES	22	Tafa2 (MGP_PahariEiJ_G0031218) #7	Slc16a7 (MGP_PahariEiJ_G0031217) #8	Lrig3 (MGP_PahariEiJ_G0031216) #9	Atp23 (MGP_PahariEiJ_G0031215) #10	Ctdsp2 (MGP_PahariEiJ_G0031214) #11	Avil (MGP_PahariEiJ_G0031213) #12	Tsfm (MGP_PahariEiJ_G0031212) #13	Eef1akmt3 (MGP_PahariEiJ_G0031211) #14	Mettl1 (MGP_PahariEiJ_G0031210) #15	Cyp27b1 (MGP_PahariEiJ_G0031209) #16	Marchf9 (MGP_PahariEiJ_G0031208) #17	Cdk4 (MGP_PahariEiJ_G0031207) #18	Tspan31 (MGP_PahariEiJ_G0031206) #19	Agap2 (MGP_PahariEiJ_G0031205) #20	Os9 (MGP_PahariEiJ_G0031204) #21	B4galnt1 (MGP_PahariEiJ_G0031203) #22	Slc26a10 (MGP_PahariEiJ_G0031202) #23	Arhgef25 (MGP_PahariEiJ_G0031201) #24	Dtx3 (MGP_PahariEiJ_G0031200) #25	Pip4k2c (MGP_PahariEiJ_G0031199) #26	Kif5a (MGP_PahariEiJ_G0031198) #27	Dctn2 (MGP_PahariEiJ_G0031197) #28	Mbd6 (MGP_PahariEiJ_G0031196) #29	Ddit3 (MGP_PahariEiJ_G0031195) #30	Mars1 (MGP_PahariEiJ_G0031194) #32	MGP_PahariEiJ_G0031193 #33	Gli1 (MGP_PahariEiJ_G0031192) #34	Inhbe (MGP_PahariEiJ_G0031191) #35	Inhbc (MGP_PahariEiJ_G0031190) #36	R3hdm2 (MGP_PahariEiJ_G0031189) #37	Stac3 (MGP_PahariEiJ_G0031188)
Rat	MODERN SPECIES	17	Lrig3 (ENSRNOG00000007654) #9	RGD1564306 (ENSRNOG00000032335)	Atp23 (ENSRNOG00000045629) #10	Ctdsp2 (ENSRNOG00000068220) #11	Avil (ENSRNOG00000050419) #12	Tsfm (ENSRNOG00000048843) #13	Eef1akmt3 (ENSRNOG00000047631) #14	Mettl1 (ENSRNOG00000047895) #15	Cyp27b1 (ENSRNOG00000046214) #16	AABR07057423.1 (ENSRNOG00000046245) #17	Cdk4 (ENSRNOG00000025602) #18	Tspan31 (ENSRNOG00000025592) #19	Agap2 (ENSRNOG00000025584) #20	Os9 (ENSRNOG00000025570) #21	RGD1565117 (ENSRNOG00000033161)	B4galnt1 (ENSRNOG00000004839) #22	Slc26a10 (ENSRNOG00000029465) #23	Arhgef25 (ENSRNOG00000005034) #24	Dtx3 (ENSRNOG00000005129) #25	Pip4k2c (ENSRNOG00000005138) #26	Kif5a (ENSRNOG00000005299) #27	ENSRNOG00000069110	Dctn2 (ENSRNOG00000025481) #28	Mbd6 (ENSRNOG00000006209) #29	Ddit3 (ENSRNOG00000006789) #30	Mars1 (ENSRNOG00000025459) #32	Arhgap9 (ENSRNOG00000006946) #33	Gli1 (ENSRNOG00000025120) #34	Inhbe (ENSRNOG00000007601) #35	Inhbc (ENSRNOG00000007700) #36	R3hdm2 (ENSRNOG00000007801) #37