Euarchontoglires ANCESTRAL SPECIES 19 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Primates ANCESTRAL SPECIES 20 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a Haplorrhini ANCESTRAL SPECIES 19 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a Simiiformes ANCESTRAL SPECIES 20 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Catarrhini ANCESTRAL SPECIES 15 ENSGT00940000154502.h #9 ENSGT00940000155059.e ##8 ENSGT00940000154502.g.b.a ##9 ENSGT00940000153141.B.a #11 ENSGT00940000153876.B.j.a.b.a ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000155263.v ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT00440000038159.o.b ENSGT00390000009040 #33 ENSGT00940000154185.l.a.a ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 Cercopithecidae ANCESTRAL SPECIES 14 ENSGT00910000147347 ENSGT00940000155059.f.b ##8 ENSGT00940000154502.g.b.a ##9 ENSGT00940000153141.B.a #11 ENSGT00940000153876.B.j.a.b.a ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000155263.v ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT00440000038159.o.b ENSGT00390000009040 #33 ENSGT00940000154185.l.a.a ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 Cercopithecinae ANCESTRAL SPECIES 16 ENSGT00940000154502.h #9 ENSGT00910000147347 ENSGT00940000155059.f.b ##8 ENSGT00940000154502.g.b.a.a ##9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000155263.v ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT00440000038159.o.b ENSGT00390000009040 #33 ENSGT00940000154185.l.a.a.a ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00910000147347 ENSGT00940000155059.f.b ##8 ENSGT00940000154502.g.b.a.a ##9 ENSGT00940000155762 #10 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000153052.c.b.a.a.a.a.b.a.b ENSGT00390000003248.a.a.a.a.b ##22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000155263.v ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT00440000038159.o.b ENSGT00390000009040 #33 ENSGT00940000154185.l.a.a.a ENSGT00940000155121 #35 ENSGT00390000004881.z Macaca ANCESTRAL SPECIES 14 ENSGT00940000155059.f.b ##8 ENSGT00940000154502.g.b.a.a ##9 ENSGT00940000155762 #10 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00910000147608 ENSGT00840000130804 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000153052.c.b.a.a.a.a.b.a.b ENSGT00390000003248.a.a.a.a.b ##22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000155263.v ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185.l.a.a.a ENSGT00940000155121 #35 ENSGT00390000004881.z ENSGT00940000159123 #36 Macaca_a ANCESTRAL SPECIES 16 ENSGT00910000147170 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059.f.a.b #8 ENSGT00940000154502.h #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT01040000240559.a.a.b #31 ENSGT00390000009040 #33 ENSGT00940000154185.l.a.a.a ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00910000147783 #37 ENSGT00390000003289 ENSGT00940000157341 Crab-eating macaque MODERN SPECIES 18 TOX (ENSMFAG00000017703) #7 NSMAF (ENSMFAG00000003576) #8 SDCBP (ENSMFAG00000037999) #9 ENSMFAG00000049240 #10 CYP7A1 (ENSMFAG00000041863) #11 UBXN2B (ENSMFAG00000014095) #12 FAM110B (ENSMFAG00000038229) #13 BPNT2 (ENSMFAG00000034283) #14 ENSMFAG00000061878 #15 PENK (ENSMFAG00000031729) #16 ENSMFAG00000059119 #17 SDR16C5 (ENSMFAG00000002079) #18 ENSMFAG00000040366 #19 PLAG1 (ENSMFAG00000030888) #20 MOS (ENSMFAG00000012716) #21 RPS20 (ENSMFAG00000053482) #22 ENSMFAG00000049803 #23 LYN (ENSMFAG00000043272) #24 ENSMFAG00000059898 #25 TGS1 (ENSMFAG00000029838) #26 TMEM68 (ENSMFAG00000019904) #27 XKR4 (ENSMFAG00000039071) #28 RP1 (ENSMFAG00000038067) #29 SOX17 (ENSMFAG00000056293) #30 ENSMFAG00000062730 #31 ENSMFAG00000064062 #32 MRPL15 (ENSMFAG00000000491) #33 ENSMFAG00000057104 #34 TCEA1 (ENSMFAG00000041675) #35 RGS20 (ENSMFAG00000031333) #36 ENSMFAG00000064802 #37 Rhesus DUPLICATION Rhesus MODERN SPECIES 327 TASL (ENSMMUG00000012710) NR0B1 (ENSMMUG00000012775) MAGEB1 (ENSMMUG00000012774) MAGEB3 (ENSMMUG00000012772) ENSMMUG00000057867 ##25 IL1RAPL1 (ENSMMUG00000001663) ENSMMUG00000050066 MAGEB10 (ENSMMUG00000022849) DCAF8L1 (ENSMMUG00000003918) ENSMMUG00000060474 ENSMMUG00000061434 ##25 MAGEB5 (ENSMMUG00000044123) ENSMMUG00000037513 MAGEB18 (ENSMMUG00000010056) ENSMMUG00000056114 ENSMMUG00000045362 #22 ARX (ENSMMUG00000055034) POLA1 (ENSMMUG00000018433) PCYT1B (ENSMMUG00000012821) PDK3 (ENSMMUG00000012819) ENSMMUG00000042416 ENSMMUG00000042317 ENSMMUG00000032498 ZFX (ENSMMUG00000009801) ENSMMUG00000006979 KLHL15 (ENSMMUG00000037633) CXHXorf58 (ENSMMUG00000064452) APOO (ENSMMUG00000016361) ENSMMUG00000057253 SAT1 (ENSMMUG00000060580) ACOT9 (ENSMMUG00000018824) Rhesus MODERN SPECIES 10 ENSMMUG00000060263 ##25 TSHZ3 (ENSMMUG00000014028) ZNF536 (ENSMMUG00000063586) ENSMMUG00000058273 URI1 (ENSMMUG00000018441) CCNE1 (ENSMMUG00000020668) C19H19orf12 (ENSMMUG00000021690) PLEKHF1 (ENSMMUG00000011373) POP4 (ENSMMUG00000017424) VSTM2B (ENSMMUG00000007392) ENSMMUG00000008417 ENSMMUG00000012013 ENSMMUG00000040891 ENSMMUG00000053639 ZNF254 (ENSMMUG00000052284) ENSMMUG00000065175 #22 ENSMMUG00000061458 ZNF726 (ENSMMUG00000003645) ENSMMUG00000003688 ENSMMUG00000062694 ##32 ENSMMUG00000037794 ENSMMUG00000063831 ENSMMUG00000064404 ENSMMUG00000045698 ENSMMUG00000059643 ENSMMUG00000028816 ENSMMUG00000053961 ENSMMUG00000038943 ENSMMUG00000060408 ENSMMUG00000062521 ENSMMUG00000064561 Rhesus MODERN SPECIES 18 ENSMMUG00000017297 #8 SDCBP (ENSMMUG00000017296) #9 ENSMMUG00000010354 #10 CYP7A1 (ENSMMUG00000006543) #11 ENSMMUG00000064769 UBXN2B (ENSMMUG00000001100) #12 FAM110B (ENSMMUG00000055289) #13 ENSMMUG00000053023 BPNT2 (ENSMMUG00000014650) #14 PENK (ENSMMUG00000006775) #16 ENSMMUG00000052791 #17 SDR16C5 (ENSMMUG00000014810) #18 CHCHD7 (ENSMMUG00000046464) #19 PLAG1 (ENSMMUG00000061268) #20 MOS (ENSMMUG00000015236) #21 RPS20 (ENSMMUG00000053276) #22 LYN (ENSMMUG00000014149) #24 ENSMMUG00000058606 TGS1 (ENSMMUG00000005478) #26 TMEM68 (ENSMMUG00000005477) #27 ENSMMUG00000055000 XKR4 (ENSMMUG00000003733) #28 RP1 (ENSMMUG00000014640) #29 ENSMMUG00000000082 SOX17 (ENSMMUG00000063192) #30 ENSMMUG00000051150 #31 MRPL15 (ENSMMUG00000005539) #33 LYPLA1 (ENSMMUG00000013157) TCEA1 (ENSMMUG00000016022) #35 RGS20 (ENSMMUG00000015417) #36 ATP6V1H (ENSMMUG00000004064) Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 549 ENSMNEG00000007228 #22 ENSMNEG00000044162 ARX (ENSMNEG00000041141) POLA1 (ENSMNEG00000031890) PCYT1B (ENSMNEG00000028533) PDK3 (ENSMNEG00000044294) ENSMNEG00000001268 ZFX (ENSMNEG00000045098) ENSMNEG00000031395 KLHL15 (ENSMNEG00000006144) CXorf58 (ENSMNEG00000045055) APOO (ENSMNEG00000021703) ENSMNEG00000042646 SAT1 (ENSMNEG00000028507) ACOT9 (ENSMNEG00000034251) PRDX4 (ENSMNEG00000030258) Pig-tailed macaque MODERN SPECIES 593 CHD4 (ENSMNEG00000044776) ENSMNEG00000034027 IFFO1 (ENSMNEG00000039291) GAPDH (ENSMNEG00000040437) NCAPD2 (ENSMNEG00000038279) MRPL51 (ENSMNEG00000032063) ENSMNEG00000040627 VAMP1 (ENSMNEG00000006897) ENSMNEG00000033079 TAPBPL (ENSMNEG00000013053) CD27 (ENSMNEG00000007757) LTBR (ENSMNEG00000030358) SCNN1A (ENSMNEG00000029812) TNFRSF1A (ENSMNEG00000030151) PLEKHG6 (ENSMNEG00000029942) ENSMNEG00000019715 #22 CD9 (ENSMNEG00000042314) VWF (ENSMNEG00000042662) ANO2 (ENSMNEG00000032451) NTF3 (ENSMNEG00000040348) KCNA5 (ENSMNEG00000002803) KCNA1 (ENSMNEG00000000927) KCNA6 (ENSMNEG00000028058) ENSMNEG00000031558 GALNT8 (ENSMNEG00000019623) NDUFA9 (ENSMNEG00000038549) ENSMNEG00000032661 AKAP3 (ENSMNEG00000030253) DYRK4 (ENSMNEG00000032078) RAD51AP1 (ENSMNEG00000031816) C12orf4 (ENSMNEG00000029537) Pig-tailed macaque MODERN SPECIES 272 SPIN1 (ENSMNEG00000038251) NXNL2 (ENSMNEG00000014676) ENSMNEG00000037607 ENSMNEG00000031176 S1PR3 (ENSMNEG00000007167) ENSMNEG00000018696 SHC3 (ENSMNEG00000036450) CKS2 (ENSMNEG00000032033) SECISBP2 (ENSMNEG00000031737) SEMA4D (ENSMNEG00000033475) GADD45G (ENSMNEG00000042753) ENSMNEG00000012312 DIRAS2 (ENSMNEG00000003176) SYK (ENSMNEG00000037700) AUH (ENSMNEG00000044070) ENSMNEG00000015556 #22 NFIL3 (ENSMNEG00000028212) ROR2 (ENSMNEG00000041877) SPTLC1 (ENSMNEG00000021594) ENSMNEG00000006043 ENSMNEG00000035499 IARS1 (ENSMNEG00000018792) NOL8 (ENSMNEG00000036927) CENPP (ENSMNEG00000040692) OGN (ENSMNEG00000024272) OMD (ENSMNEG00000040476) ASPN (ENSMNEG00000034619) ECM2 (ENSMNEG00000044237) IPPK (ENSMNEG00000040673) BICD2 (ENSMNEG00000044602) FGD3 (ENSMNEG00000035382) Cercopithecinae_b ANCESTRAL SPECIES 9 ENSGT00910000147347 ENSGT00940000155059.f.b ##8 ENSGT00940000154502.g.b.a.a ##9 ENSGT00940000155762 #10 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00940000153052.c.b.a.a.a.a.b.a.b ENSGT00390000003248.a.a.a.a.b ##22 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT00440000038159.o.b ENSGT00390000009040 #33 ENSGT00940000154185.l.a.a.a ENSGT00940000155121 #35 ENSGT00390000004881.z ENSGT00940000159123 #36 ENSGT00910000147783 #37 ENSGT00390000003289 Olive baboon DUPLICATION Olive baboon MODERN SPECIES 792 IL1RAPL1 (ENSPANG00000007585) ENSPANG00000048760 ENSPANG00000040133 DCAF8L1 (ENSPANG00000024278) ENSPANG00000049317 MAGEB10 (ENSPANG00000048909) ENSPANG00000040441 DCAF8L2 (ENSPANG00000046861) ENSPANG00000034100 ENSPANG00000041552 MAGEB5 (ENSPANG00000035394) MAGEB18 (ENSPANG00000039076) ENSPANG00000019440 ENSPANG00000045518 ##23 POLA1 (ENSPANG00000010729) ENSPANG00000039655 #22 ARX (ENSPANG00000008103) PCYT1B (ENSPANG00000002970) PDK3 (ENSPANG00000017372) ENSPANG00000042252 ENSPANG00000049773 ENSPANG00000010730 ENSPANG00000020386 ZFX (ENSPANG00000000982) ENSPANG00000045157 ##25 ENSPANG00000004507 KLHL15 (ENSPANG00000010573) CXorf58 (ENSPANG00000017030) APOO (ENSPANG00000009164) ENSPANG00000010731 SAT1 (ENSPANG00000004013) Olive baboon MODERN SPECIES 18 CYP7A1 (ENSPANG00000017844) #11 UBXN2B (ENSPANG00000014734) #12 FAM110B (ENSPANG00000013667) #13 ENSPANG00000041025 ENSPANG00000044863 ENSPANG00000042586 ENSPANG00000042702 ENSPANG00000050330 BPNT2 (ENSPANG00000008388) #14 ENSPANG00000048475 ##23 ENSPANG00000050287 PENK (ENSPANG00000015057) #16 SDR16C5 (ENSPANG00000005056) #18 CHCHD7 (ENSPANG00000026089) #19 PLAG1 (ENSPANG00000009705) #20 ENSPANG00000018451 #22 LYN (ENSPANG00000024756) #24 TGS1 (ENSPANG00000018910) #26 TMEM68 (ENSPANG00000009706) #27 XKR4 (ENSPANG00000034384) #28 RP1 (ENSPANG00000005975) #29 ENSPANG00000030917 SOX17 (ENSPANG00000044610) #30 ENSPANG00000049863 ENSPANG00000015007 #33 ENSPANG00000009673 TCEA1 (ENSPANG00000018453) #35 RGS20 (ENSPANG00000017181) #36 ATP6V1H (ENSPANG00000015126) ENSPANG00000032914 OPRK1 (ENSPANG00000009674) Cercopithecinae_d ANCESTRAL SPECIES 124 ENSGT00390000004690.a.b.h ENSGT00940000154509 ENSGT00940000156021 ENSGT00940000155626 ENSGT00940000156710 ENSGT00500000044920 ENSGT00390000005261 ENSGT00910000148039 ENSGT00940000157580 ENSGT00940000160654 ENSGT00940000154433.a.b.l.a ENSGT00510000048726 ENSGT00940000162193 ENSGT00940000158640 ENSGT00940000159453 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d.f ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00930000150941.x.b.b Drill MODERN SPECIES 1090 MANF (ENSMLEG00000038782) ENSMLEG00000029304 DCAF1 (ENSMLEG00000030256) KIT (ENSMLEG00000040087) KDR (ENSMLEG00000038992) SRD5A3 (ENSMLEG00000036587) TMEM165 (ENSMLEG00000036618) ENSMLEG00000026848 CLOCK (ENSMLEG00000032159) PDCL2 (ENSMLEG00000032563) ENSMLEG00000033206 NMU (ENSMLEG00000001068) EXOC1L (ENSMLEG00000012366) EXOC1 (ENSMLEG00000031006) CEP135 (ENSMLEG00000042514) ENSMLEG00000016421 #22 Sooty mangabey MODERN SPECIES 180 ENSCATG00000038972 PDGFRA (ENSCATG00000018830) KIT (ENSCATG00000004601) KDR (ENSCATG00000026660) ENSCATG00000035741 SRD5A3 (ENSCATG00000040052) TMEM165 (ENSCATG00000036895) ENSCATG00000017377 CLOCK (ENSCATG00000002646) PDCL2 (ENSCATG00000041890) ENSCATG00000040815 NMU (ENSCATG00000000632) EXOC1L (ENSCATG00000029322) EXOC1 (ENSCATG00000043473) CEP135 (ENSCATG00000012612) ENSCATG00000020059 #22 CRACD (ENSCATG00000034559) AASDH (ENSCATG00000009332) PPAT (ENSCATG00000000386) PAICS (ENSCATG00000036203) SRP72 (ENSCATG00000008072) ARL9 (ENSCATG00000031380) THEGL (ENSCATG00000041268) ENSCATG00000032783 Vervet Monkey MODERN SPECIES 27 CA8 (ENSCSAG00000014368) TOX (ENSCSAG00000014375) #7 ENSCSAG00000014470 #8 ENSCSAG00000014518 ##9 CYP7A1 (ENSCSAG00000014532) #11 UBXN2B (ENSCSAG00000014542) #12 FAM110B (ENSCSAG00000018549) #13 ENSCSAG00000018548 BPNT2 (ENSCSAG00000014546) #14 PENK (ENSCSAG00000014552) #16 SDR16C5 (ENSCSAG00000014558) #18 CHCHD7 (ENSCSAG00000014569) #19 PLAG1 (ENSCSAG00000014574) #20 MOS (ENSCSAG00000018547) #21 ENSCSAG00000014589 RPS20 (ENSCSAG00000014597) #22 LYN (ENSCSAG00000014603) #24 TGS1 (ENSCSAG00000014611) #26 TMEM68 (ENSCSAG00000014625) #27 ENSCSAG00000014632 ENSCSAG00000014645 RP1 (ENSCSAG00000014654) #29 SOX17 (ENSCSAG00000014667) #30 ENSCSAG00000018544 MRPL15 (ENSCSAG00000014671) #33 TCEA1 (ENSCSAG00000014680) #35 RGS20 (ENSCSAG00000014690) #36 ATP6V1H (ENSCSAG00000014698) OPRK1 (ENSCSAG00000014703) NPBWR1 (ENSCSAG00000018542) RB1CC1 (ENSCSAG00000014715) Rhinopithecus ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b #22 Black snub-nosed monkey MODERN SPECIES 1026 GCG (ENSRBIG00000037468) FAP (ENSRBIG00000038012) IFIH1 (ENSRBIG00000029188) GCA (ENSRBIG00000000271) ENSRBIG00000034718 KCNH7 (ENSRBIG00000039134) ENSRBIG00000030858 FIGN (ENSRBIG00000031693) ENSRBIG00000029608 #22 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 2663 ENSRROG00000031199 NONO (ENSRROG00000043203) ENSRROG00000023407 #22 Golden snub-nosed monkey MODERN SPECIES 1766 KRT3 (ENSRROG00000037448) KRT79 (ENSRROG00000039228) KRT76 (ENSRROG00000008365) ENSRROG00000029941 ENSRROG00000037989 ENSRROG00000031377 ENSRROG00000038431 EIF4B (ENSRROG00000033336) TNS2 (ENSRROG00000040696) SPRYD3 (ENSRROG00000036435) IGFBP6 (ENSRROG00000028720) SOAT2 (ENSRROG00000043344) CSAD (ENSRROG00000036761) ZNF740 (ENSRROG00000037136) ITGB7 (ENSRROG00000028868) ENSRROG00000007396 #22 RARG (ENSRROG00000034892) MFSD5 (ENSRROG00000037319) ESPL1 (ENSRROG00000043464) ENSRROG00000042206 MYG1 (ENSRROG00000030453) AAAS (ENSRROG00000040227) SP7 (ENSRROG00000029296) SP1 (ENSRROG00000029551) AMHR2 (ENSRROG00000035137) ENSRROG00000043448 PCBP2 (ENSRROG00000041377) MAP3K12 (ENSRROG00000029455) TARBP2 (ENSRROG00000044783) NPFF (ENSRROG00000042539) ATF7 (ENSRROG00000031964) Hominoidea ANCESTRAL SPECIES 14 ENSGT00910000147347 ENSGT00940000155059.e ##8 ENSGT00940000154502.g.b.a ##9 ENSGT00940000153141.B.a #11 ENSGT00940000153876.B.j.a.b.a ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00940000160216 #14 ENSGT00390000005254.i.a.b.n.a ENSGT00950000183149.A #16 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000155263.v ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT00440000038159.o.b ENSGT00390000009040 #33 ENSGT00940000154185.l.a.a ENSGT00940000154185.l.a.b ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 Gibbon DUPLICATION Gibbon MODERN SPECIES 11 ENSNLEG00000018377 PSMD7 (ENSNLEG00000032555) WWP2 (ENSNLEG00000005599) ENSNLEG00000030907 NOB1 (ENSNLEG00000005572) NQO1 (ENSNLEG00000032087) NFAT5 (ENSNLEG00000005522) CYB5B (ENSNLEG00000005515) TERF2 (ENSNLEG00000005506) TMED6 (ENSNLEG00000005500) NIP7 (ENSNLEG00000005492) ENSNLEG00000005489 PDF (ENSNLEG00000005487) VPS4A (ENSNLEG00000005466) SNTB2 (ENSNLEG00000005458) ENSNLEG00000034238 #22 ENSNLEG00000030234 UTP4 (ENSNLEG00000005420) CHTF8 (ENSNLEG00000005415) HAS3 (ENSNLEG00000005404) TANGO6 (ENSNLEG00000005380) CDH1 (ENSNLEG00000005326) CDH3 (ENSNLEG00000005301) ENSNLEG00000029786 ZFP90 (ENSNLEG00000005294) ENSNLEG00000034725 SMPD3 (ENSNLEG00000005281) PRMT7 (ENSNLEG00000005240) ENSNLEG00000031669 SLC7A6OS (ENSNLEG00000005228) SLC7A6 (ENSNLEG00000028930) Gibbon MODERN SPECIES 19 PSTPIP2 (ENSNLEG00000010965) ATP5F1A (ENSNLEG00000010973) HAUS1 (ENSNLEG00000011216) C18orf25 (ENSNLEG00000011251) RNF165 (ENSNLEG00000011270) LOXHD1 (ENSNLEG00000011276) ST8SIA5 (ENSNLEG00000011343) PIAS2 (ENSNLEG00000011351) ENSNLEG00000032966 ENSNLEG00000031576 ENSNLEG00000034552 ENSNLEG00000026544 ELOA2 (ENSNLEG00000011422) KATNAL2 (ENSNLEG00000011402) HDHD2 (ENSNLEG00000036069) ENSNLEG00000029962 #22 IER3IP1 (ENSNLEG00000011450) ENSNLEG00000029297 ENSNLEG00000029516 ENSNLEG00000011462 SMAD2 (ENSNLEG00000011463) ZBTB7C (ENSNLEG00000011492) ENSNLEG00000011500 ENSNLEG00000030200 CTIF (ENSNLEG00000011503) SMAD7 (ENSNLEG00000034951) ENSNLEG00000032202 ENSNLEG00000011539 C18orf32 (ENSNLEG00000011553) ENSNLEG00000029836 ENSNLEG00000034341 Hominidae ANCESTRAL SPECIES 15 ENSGT00910000147347 ENSGT00940000155059.e ##8 ENSGT00940000154502.g.b.a ##9 ENSGT00940000153141.B.a #11 ENSGT00940000153876.B.j.a.b.a ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00940000160216 #14 ENSGT00390000005254.i.a.b.n.a ENSGT00950000183149.A #16 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000155263.v ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT00440000038159.o.b ENSGT00390000009040 #33 ENSGT00940000154185.l.a.a ENSGT00940000154185.l.a.b ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 Homo/Pan/Gorilla group ANCESTRAL SPECIES 13 ENSGT00940000155059.e ##8 ENSGT00940000154502.g.b.a ##9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b.d #12 ENSGT00940000153876.B.j.a.b.a ENSGT00520000055567.a.a.b.c.a #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00910000148739 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000155263.v ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.f.c.b ENSGT00940000156694 #30 ENSGT00440000038159.o.b ENSGT00390000009040 #33 ENSGT00940000154185.l.a.a ENSGT00940000154185.l.a.b.a ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 Homo/Pan group ANCESTRAL SPECIES 12 ENSGT00940000155059.f.b ##8 ENSGT00940000154502.h #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b.d #12 ENSGT00940000153876.B.j.a.b.a ENSGT00520000055567.a.a.b.c.a #12 ENSGT00950000183056.B.b #13 ENSGT00840000130804 ENSGT00910000148739 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.f.c.b ENSGT00940000156694 #30 ENSGT00440000038159.o.b ENSGT00390000009040 #33 ENSGT00940000154185.l.a.a ENSGT00940000154185.l.a.b.a ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 Human MODERN SPECIES 20 CHD7 (ENSG00000171316) RAB2A (ENSG00000104388) CA8 (ENSG00000178538) TOX (ENSG00000198846) #7 NSMAF (ENSG00000035681) ##8 SDCBP (ENSG00000137575) ##9 CYP7A1 (ENSG00000167910) #11 UBXN2B (ENSG00000215114) #12 FAM110B (ENSG00000169122) #13 BPNT2 (ENSG00000104331) #14 PENK (ENSG00000181195) #16 SDR16C5 (ENSG00000170786) #18 CHCHD7 (ENSG00000170791) #19 PLAG1 (ENSG00000181690) #20 MOS (ENSG00000172680) #21 RPS20 (ENSG00000008988) #22 LYN (ENSG00000254087) #24 TGS1 (ENSG00000137574) #26 TMEM68 (ENSG00000167904) #27 XKR4 (ENSG00000206579) #28 RP1 (ENSG00000104237) #29 SOX17 (ENSG00000164736) #30 MRPL15 (ENSG00000137547) #33 LYPLA1 (ENSG00000120992) TCEA1 (ENSG00000187735) #35 RGS20 (ENSG00000147509) #36 ATP6V1H (ENSG00000047249) OPRK1 (ENSG00000082556) NPBWR1 (ENSG00000288611) RB1CC1 (ENSG00000023287) ALKAL1 (ENSG00000196711) Pan ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b #22 Bonobo DUPLICATION Bonobo MODERN SPECIES 18 FAM174A (ENSPPAG00000021592) ST8SIA4 (ENSPPAG00000033695) ENSPPAG00000024337 SLCO4C1 (ENSPPAG00000043922) SLCO6A1 (ENSPPAG00000026067) PAM (ENSPPAG00000029053) ENSPPAG00000034972 GIN1 (ENSPPAG00000034818) PPIP5K2 (ENSPPAG00000027206) MACIR (ENSPPAG00000021533) NUDT12 (ENSPPAG00000036756) ENSPPAG00000030911 EFNA5 (ENSPPAG00000014646) ENSPPAG00000029397 ENSPPAG00000028652 ENSPPAG00000035591 #22 FER (ENSPPAG00000039597) ENSPPAG00000043941 ENSPPAG00000035716 PJA2 (ENSPPAG00000039234) MAN2A1 (ENSPPAG00000037961) ENSPPAG00000036482 ENSPPAG00000001922 TMEM232 (ENSPPAG00000039615) SLC25A46 (ENSPPAG00000042617) ENSPPAG00000029536 TSLP (ENSPPAG00000037495) ENSPPAG00000043068 WDR36 (ENSPPAG00000023560) ENSPPAG00000029092 CAMK4 (ENSPPAG00000041231) Bonobo DUPLICATION Bonobo MODERN SPECIES 14 PAX8 (ENSPPAG00000031225) PSD4 (ENSPPAG00000033376) IL1RN (ENSPPAG00000015989) IL1F10 (ENSPPAG00000043667) IL36RN (ENSPPAG00000041031) IL36A (ENSPPAG00000029741) IL36G (ENSPPAG00000043332) IL1B (ENSPPAG00000040259) IL1A (ENSPPAG00000032352) CKAP2L (ENSPPAG00000028692) NT5DC4 (ENSPPAG00000042503) SLC20A1 (ENSPPAG00000028697) ENSPPAG00000040293 #22 ENSPPAG00000044134 POLR1B (ENSPPAG00000002774) TTL (ENSPPAG00000031340) ZC3H6 (ENSPPAG00000030495) ZC3H8 (ENSPPAG00000028071) FBLN7 (ENSPPAG00000031204) TMEM87B (ENSPPAG00000029775) ENSPPAG00000008003 MERTK (ENSPPAG00000030353) ENSPPAG00000005462 BCL2L11 (ENSPPAG00000040431) ACOXL (ENSPPAG00000039043) BUB1 (ENSPPAG00000039224) ENSPPAG00000011690 ENSPPAG00000042220 Bonobo MODERN SPECIES 22 ENSPPAG00000040048 VPS13A (ENSPPAG00000005660) ENSPPAG00000041248 PRUNE2 (ENSPPAG00000030555) GCNT1 (ENSPPAG00000018525) RFK (ENSPPAG00000044017) PCSK5 (ENSPPAG00000027360) OSTF1 (ENSPPAG00000039936) NMRK1 (ENSPPAG00000033100) CARNMT1 (ENSPPAG00000038872) ENSPPAG00000035253 TRPM6 (ENSPPAG00000030433) RORB (ENSPPAG00000027216) ANXA1 (ENSPPAG00000030576) ALDH1A1 (ENSPPAG00000027865) ENSPPAG00000042355 #22 TMC1 (ENSPPAG00000032378) ENSPPAG00000015947 ZFAND5 (ENSPPAG00000027676) GDA (ENSPPAG00000038576) ENSPPAG00000012888 ENSPPAG00000039954 ABHD17B (ENSPPAG00000033499) CEMIP2 (ENSPPAG00000042282) TRPM3 (ENSPPAG00000031896) KLF9 (ENSPPAG00000039025) ENSPPAG00000010462 MAMDC2 (ENSPPAG00000033004) CFAP95 (ENSPPAG00000027896) PTAR1 (ENSPPAG00000027910) ENSPPAG00000041522 Platyrrhini ANCESTRAL SPECIES 17 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000153571.a.eb ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00390000003248.a.a.a.a.b ##22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185.m ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 Cebidae ANCESTRAL SPECIES 19 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000153571.a.eb ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00390000003248.a.a.a.a.b ##22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00390000009040.l #33 ENSGT00390000015600.c.a.e ENSGT00940000156694 #30 ENSGT00390000009040.k.a #33 ENSGT00940000154185.m ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 Marmoset MODERN SPECIES 21 ANHX (ENSCJAG00000002388) ENSCJAG00000085636 #22 ZNF268 (ENSCJAG00000013112) ZNF891 (ENSCJAG00000023027) ZNF140 (ENSCJAG00000076252) ZNF84 (ENSCJAG00000059441) ZNF26 (ENSCJAG00000013090) ZNF605 (ENSCJAG00000013074) CHFR (ENSCJAG00000013030) ENSCJAG00000078028 GOLGA3 (ENSCJAG00000013000) ANKLE2 (ENSCJAG00000012978) ENSCJAG00000041324 ENSCJAG00000041980 ENSCJAG00000023026 POLE (ENSCJAG00000012853) P2RX2 (ENSCJAG00000012817) Cebidae_a ANCESTRAL SPECIES 182 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 Capuchin DUPLICATION Capuchin MODERN SPECIES 73 ENSCCAG00000019923 PENK (ENSCCAG00000035952) #16 SDR16C5 (ENSCCAG00000032603) #18 CHCHD7 (ENSCCAG00000029296) #19 PLAG1 (ENSCCAG00000038024) #20 ENSCCAG00000026535 MOS (ENSCCAG00000011184) #21 RPS20 (ENSCCAG00000023603) #22 ENSCCAG00000034786 LYN (ENSCCAG00000026427) #24 TGS1 (ENSCCAG00000030476) #26 TMEM68 (ENSCCAG00000037608) #27 XKR4 (ENSCCAG00000032075) #28 RP1 (ENSCCAG00000030036) #29 ENSCCAG00000030682 SOX17 (ENSCCAG00000034190) #30 ENSCCAG00000032567 ENSCCAG00000018866 ##22 ENSCCAG00000000796 ENSCCAG00000036893 #33 ENSCCAG00000023731 TCEA1 (ENSCCAG00000018619) #35 RGS20 (ENSCCAG00000029095) #36 Capuchin MODERN SPECIES 109 CFAP418 (ENSCCAG00000029098) PLEKHF2 (ENSCCAG00000019372) NDUFAF6 (ENSCCAG00000030934) TP53INP1 (ENSCCAG00000026030) CCNE2 (ENSCCAG00000020230) INTS8 (ENSCCAG00000037448) ENSCCAG00000028912 DPY19L4 (ENSCCAG00000032282) ENSCCAG00000028859 ESRP1 (ENSCCAG00000021066) ENSCCAG00000009664 #22 VIRMA (ENSCCAG00000036600) RAD54B (ENSCCAG00000011754) GEM (ENSCCAG00000005600) CDH17 (ENSCCAG00000028997) ENSCCAG00000033599 PDP1 (ENSCCAG00000036931) ENSCCAG00000021460 TMEM67 (ENSCCAG00000026829) CIBAR1 (ENSCCAG00000034321) TRIQK (ENSCCAG00000021343) RUNX1T1 (ENSCCAG00000025365) SLC26A7 (ENSCCAG00000017342) LRRC69 (ENSCCAG00000032597) OTUD6B (ENSCCAG00000027195) PIP4P2 (ENSCCAG00000026867) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 119 LTK (ENSSBOG00000020788) ITPKA (ENSSBOG00000020388) RTF1 (ENSSBOG00000034017) NDUFAF1 (ENSSBOG00000026366) NUSAP1 (ENSSBOG00000021334) OIP5 (ENSSBOG00000031279) CHP1 (ENSSBOG00000030633) EXD1 (ENSSBOG00000024842) INO80 (ENSSBOG00000023493) ENSSBOG00000018259 CHAC1 (ENSSBOG00000013242) DLL4 (ENSSBOG00000034833) VPS18 (ENSSBOG00000031303) RHOV (ENSSBOG00000019703) SPINT1 (ENSSBOG00000025282) ENSSBOG00000012627 #22 ENSSBOG00000030630 ZFYVE19 (ENSSBOG00000030932) ENSSBOG00000032474 C15orf62 (ENSSBOG00000019131) GCHFR (ENSSBOG00000031190) RMDN3 (ENSSBOG00000024868) RAD51 (ENSSBOG00000022885) KNL1 (ENSSBOG00000028937) ENSSBOG00000033044 RPUSD2 (ENSSBOG00000035031) CCDC32 (ENSSBOG00000031392) ENSSBOG00000006100 BAHD1 (ENSSBOG00000031940) IVD (ENSSBOG00000033803) ENSSBOG00000035522 Bolivian squirrel monkey MODERN SPECIES 206 LZTR1 (ENSSBOG00000025324) AIFM3 (ENSSBOG00000024530) CRKL (ENSSBOG00000025677) ENSSBOG00000031068 SNAP29 (ENSSBOG00000024243) SERPIND1 (ENSSBOG00000029675) PI4KA (ENSSBOG00000020419) ENSSBOG00000029430 HIC2 (ENSSBOG00000026991) ENSSBOG00000022483 YDJC (ENSSBOG00000029769) CCDC116 (ENSSBOG00000025610) SDF2L1 (ENSSBOG00000028571) PPIL2 (ENSSBOG00000026597) YPEL1 (ENSSBOG00000025556) ENSSBOG00000023529 #22 MAPK1 (ENSSBOG00000028316) ENSSBOG00000022395 PPM1F (ENSSBOG00000024402) ENSSBOG00000021563 ENSSBOG00000022927 ENSSBOG00000017703 ENSSBOG00000030994 ENSSBOG00000024053 Bolivian squirrel monkey MODERN SPECIES 51 STBD1 (ENSSBOG00000030295) CCDC158 (ENSSBOG00000033721) ENSSBOG00000021934 ENSSBOG00000033914 SHROOM3 (ENSSBOG00000018112) SEPTIN11 (ENSSBOG00000020488) ENSSBOG00000025539 CCNI (ENSSBOG00000035507) ENSSBOG00000035303 ENSSBOG00000017033 #22 CCNG2 (ENSSBOG00000020531) ENSSBOG00000020872 ENSSBOG00000020463 ENSSBOG00000034318 CXCL13 (ENSSBOG00000027580) CNOT6L (ENSSBOG00000028521) ENSSBOG00000005784 ENSSBOG00000020474 FRAS1 (ENSSBOG00000034612) ENSSBOG00000033139 ANXA3 (ENSSBOG00000035199) BMP2K (ENSSBOG00000026807) PAQR3 (ENSSBOG00000018736) ENSSBOG00000026056 ANTXR2 (ENSSBOG00000028910) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1366 SPART (ENSANAG00000031821) CCDC169 (ENSANAG00000027605) SOHLH2 (ENSANAG00000027740) ENSANAG00000034415 NBEA (ENSANAG00000035835) MAB21L1 (ENSANAG00000006106) ENSANAG00000013822 RFC3 (ENSANAG00000020441) ENSANAG00000025512 ENSANAG00000029740 STARD13 (ENSANAG00000018248) ENSANAG00000030076 KL (ENSANAG00000028905) PDS5B (ENSANAG00000020920) ENSANAG00000037444 ENSANAG00000011089 #22 ENSANAG00000019223 N4BP2L1 (ENSANAG00000029400) BRCA2 (ENSANAG00000025577) ZAR1L (ENSANAG00000037320) FRY (ENSANAG00000030749) ENSANAG00000031194 RXFP2 (ENSANAG00000034315) Mas night monkey MODERN SPECIES 561 ENSANAG00000031741 #22 PTEN (ENSANAG00000033430) KLLN (ENSANAG00000033415) ATAD1 (ENSANAG00000029977) PAPSS2 (ENSANAG00000035795) MINPP1 (ENSANAG00000035646) ENSANAG00000030500 ENSANAG00000030316 ENSANAG00000029474 SGMS1 (ENSANAG00000020922) ENSANAG00000030762 A1CF (ENSANAG00000019974) ENSANAG00000027508 PRKG1 (ENSANAG00000026052) DKK1 (ENSANAG00000020791) ENSANAG00000025343 Tarsier DUPLICATION Tarsier MODERN SPECIES 3082 COL25A1 (ENSTSYG00000012855) ENSTSYG00000025797 #22 ETNPPL (ENSTSYG00000004285) OSTC (ENSTSYG00000035920) RPL34 (ENSTSYG00000001781) ENSTSYG00000027966 Tarsier MODERN SPECIES 6006 KIF14 (ENSTSYG00000008740) DDX59 (ENSTSYG00000013832) CAMSAP2 (ENSTSYG00000008900) INAVA (ENSTSYG00000005312) KIF21B (ENSTSYG00000006540) CACNA1S (ENSTSYG00000002790) TMEM9 (ENSTSYG00000001525) ENSTSYG00000033602 PKP1 (ENSTSYG00000004506) TNNT2 (ENSTSYG00000036459) LAD1 (ENSTSYG00000009029) TNNI1 (ENSTSYG00000037146) RPS20 (ENSTSYG00000030243) #22 PHLDA3 (ENSTSYG00000028139) CSRP1 (ENSTSYG00000006136) NAV1 (ENSTSYG00000014353) IPO9 (ENSTSYG00000009534) SHISA4 (ENSTSYG00000033087) LMOD1 (ENSTSYG00000029478) TIMM17A (ENSTSYG00000011606) RNPEP (ENSTSYG00000029079) ELF3 (ENSTSYG00000002998) Tarsier MODERN SPECIES 1105 RPS20 (ENSTSYG00000033137) #22 LYN (ENSTSYG00000000607) #24 Strepsirrhini ANCESTRAL SPECIES 15 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.a.b ##22 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a Lemuriformes ANCESTRAL SPECIES 24 ENSGT00940000153649.A ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 27 ENSMICG00000042671 GRIA4 (ENSMICG00000003112) MSANTD4 (ENSMICG00000036595) KBTBD3 (ENSMICG00000030981) AASDHPPT (ENSMICG00000032630) ENSMICG00000036566 ENSMICG00000035020 GUCY1A2 (ENSMICG00000004925) CWF19L2 (ENSMICG00000010853) ALKBH8 (ENSMICG00000001044) ELMOD1 (ENSMICG00000001050) SLC35F2 (ENSMICG00000000245) ENSMICG00000038149 RAB39A (ENSMICG00000045554) CUL5 (ENSMICG00000000376) ENSMICG00000028194 #22 ACAT1 (ENSMICG00000000380) NPAT (ENSMICG00000000386) ATM (ENSMICG00000013655) ENSMICG00000001104 C11orf65 (ENSMICG00000003461) POGLUT3 (ENSMICG00000003463) EXPH5 (ENSMICG00000044911) DDX10 (ENSMICG00000035071) ZC3H12C (ENSMICG00000011455) RDX (ENSMICG00000011469) FDX1 (ENSMICG00000007112) ENSMICG00000002989 ARHGAP20 (ENSMICG00000029239) POU2AF2 (ENSMICG00000028357) POU2AF3 (ENSMICG00000032454) Mouse lemur MODERN SPECIES 31 SNTG1 (ENSMICG00000001818) ENSMICG00000045521 PCMTD1 (ENSMICG00000003704) ST18 (ENSMICG00000003705) ALKAL1 (ENSMICG00000046052) RB1CC1 (ENSMICG00000000604) CYP7A1 (ENSMICG00000030668) #11 UBXN2B (ENSMICG00000028037) #12 FAM110B (ENSMICG00000041645) #13 ENSMICG00000027477 BPNT2 (ENSMICG00000028623) #14 PENK (ENSMICG00000041439) #16 SDR16C5 (ENSMICG00000011717) #18 CHCHD7 (ENSMICG00000007022) #19 PLAG1 (ENSMICG00000047968) #20 RPS20 (ENSMICG00000034860) #22 LYN (ENSMICG00000031282) #24 TGS1 (ENSMICG00000011199) #26 TMEM68 (ENSMICG00000011190) #27 XKR4 (ENSMICG00000004668) #28 ENSMICG00000031576 #29 SOX17 (ENSMICG00000046540) #30 MRPL15 (ENSMICG00000009779) #33 LYPLA1 (ENSMICG00000015545) TCEA1 (ENSMICG00000029278) #35 RGS20 (ENSMICG00000015672) #36 ATP6V1H (ENSMICG00000015657) ENSMICG00000044219 OPRK1 (ENSMICG00000043008) ENSMICG00000003968 #9 NSMAF (ENSMICG00000003974) #8 Lemuriformes_a ANCESTRAL SPECIES 22 ENSGT00940000161497 ENSGT00940000159114 ENSGT00940000164349.b ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 ENSGT00390000004663 ENSGT00940000157765 ENSGT00940000155627 ENSGT00940000158563 ENSGT00940000159782 ENSGT01100000263709 ENSGT00390000015655.a ENSGT00940000159933 ENSGT00940000156648 ENSGT00390000003248.a.a.a.b #22 ENSGT01030000234626.E ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000168617.e ENSGT00510000048394 ENSGT00940000159028 ENSGT00390000011087 ENSGT00550000074980 ENSGT00390000012905 ENSGT00940000158397 ENSGT01090000260082.d.a.b ENSGT00940000156916 ENSGT00940000154633 ENSGT00390000000586 ENSGT00420000030454 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 760 ENSPCOG00000019189 ENSPCOG00000028357 CARD18 (ENSPCOG00000012524) GRIA4 (ENSPCOG00000028018) MSANTD4 (ENSPCOG00000023276) KBTBD3 (ENSPCOG00000021176) AASDHPPT (ENSPCOG00000014297) GUCY1A2 (ENSPCOG00000016375) ENSPCOG00000015897 CWF19L2 (ENSPCOG00000018032) ALKBH8 (ENSPCOG00000022645) ELMOD1 (ENSPCOG00000023055) SLC35F2 (ENSPCOG00000008427) RAB39A (ENSPCOG00000019017) CUL5 (ENSPCOG00000025380) ENSPCOG00000028494 #22 ACAT1 (ENSPCOG00000023465) NPAT (ENSPCOG00000016278) ATM (ENSPCOG00000020514) ENSPCOG00000014064 C11orf65 (ENSPCOG00000016836) POGLUT3 (ENSPCOG00000020286) EXPH5 (ENSPCOG00000018196) DDX10 (ENSPCOG00000020289) ZC3H12C (ENSPCOG00000024737) FDX1 (ENSPCOG00000012522) ARHGAP20 (ENSPCOG00000018878) POU2AF2 (ENSPCOG00000023153) POU2AF3 (ENSPCOG00000004372) POU2AF1 (ENSPCOG00000015832) BTG4 (ENSPCOG00000025062) Coquerels sifaka MODERN SPECIES 280 TMEM143 (ENSPCOG00000013967) SYNGR4 (ENSPCOG00000024811) KDELR1 (ENSPCOG00000024282) GRIN2D (ENSPCOG00000010109) GRWD1 (ENSPCOG00000009803) KCNJ14 (ENSPCOG00000017705) CYTH2 (ENSPCOG00000025849) LMTK3 (ENSPCOG00000024424) SULT2B1 (ENSPCOG00000023199) FAM83E (ENSPCOG00000014605) RPL18 (ENSPCOG00000026360) SPHK2 (ENSPCOG00000003039) DBP (ENSPCOG00000016955) CA11 (ENSPCOG00000019168) NTN5 (ENSPCOG00000028425) ENSPCOG00000003035 #22 MAMSTR (ENSPCOG00000023398) RASIP1 (ENSPCOG00000003637) IZUMO1 (ENSPCOG00000018755) FGF21 (ENSPCOG00000027174) BCAT2 (ENSPCOG00000022098) HSD17B14 (ENSPCOG00000020458) PLEKHA4 (ENSPCOG00000025521) PPP1R15A (ENSPCOG00000022531) TULP2 (ENSPCOG00000015059) NUCB1 (ENSPCOG00000017695) DHDH (ENSPCOG00000021156) BAX (ENSPCOG00000021695) FTL (ENSPCOG00000025790) GYS1 (ENSPCOG00000026554) RUVBL2 (ENSPCOG00000027000) Euarchontoglires_A ANCESTRAL SPECIES 19 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Glires ANCESTRAL SPECIES 20 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Lagomorpha ANCESTRAL SPECIES 112 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694.hb #30 ENSGT00940000156694.gb #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Pika MODERN SPECIES 3138 RPS20 (ENSOPRG00000011042) #22 LYN (ENSOPRG00000011016) #24 ENSOPRG00000010995 #26 TMEM68 (ENSOPRG00000010979) #27 Rabbit DUPLICATION Rabbit MODERN SPECIES 10 TUBD1 (ENSOCUG00000013772) VMP1 (ENSOCUG00000004210) PTRH2 (ENSOCUG00000023345) CLTC (ENSOCUG00000016413) DHX40 (ENSOCUG00000038496) ENSOCUG00000031327 ENSOCUG00000035846 YPEL2 (ENSOCUG00000020978) GDPD1 (ENSOCUG00000013113) SMG8 (ENSOCUG00000002350) PRR11 (ENSOCUG00000002337) ENSOCUG00000002334 TRIM37 (ENSOCUG00000002326) PPM1E (ENSOCUG00000026526) ENSOCUG00000002269 ENSOCUG00000025769 #22 TEX14 (ENSOCUG00000009775) ENSOCUG00000009757 MTMR4 (ENSOCUG00000009743) HSF5 (ENSOCUG00000009733) RNF43 (ENSOCUG00000009729) SUPT4H1 (ENSOCUG00000025823) TSPOAP1 (ENSOCUG00000009705) MPO (ENSOCUG00000006526) LPO (ENSOCUG00000009698) MKS1 (ENSOCUG00000010018) EPX (ENSOCUG00000010009) OR4D2 (ENSOCUG00000010006) OR4D1 (ENSOCUG00000011022) DYNLL2 (ENSOCUG00000016563) ENSOCUG00000017678 Rabbit MODERN SPECIES 6 RRH (ENSOCUG00000034648) MCUB (ENSOCUG00000013751) LRIT3 (ENSOCUG00000003908) EGF (ENSOCUG00000016388) ELOVL6 (ENSOCUG00000013069) ENPEP (ENSOCUG00000016264) PITX2 (ENSOCUG00000012685) FAM241A (ENSOCUG00000011383) AP1AR (ENSOCUG00000004413) TIFA (ENSOCUG00000017578) ALPK1 (ENSOCUG00000024991) ENSOCUG00000010848 NEUROG2 (ENSOCUG00000007063) ZGRF1 (ENSOCUG00000007057) LARP7 (ENSOCUG00000007073) ENSOCUG00000021222 #22 ANK2 (ENSOCUG00000010618) ENSOCUG00000035520 CAMK2D (ENSOCUG00000023650) ENSOCUG00000030939 UGT8 (ENSOCUG00000015037) NDST4 (ENSOCUG00000007796) ENSOCUG00000002295 ENSOCUG00000003691 TRAM1L1 (ENSOCUG00000003846) ENSOCUG00000038669 NDST3 (ENSOCUG00000009952) PRSS12 (ENSOCUG00000013625) ENSOCUG00000033772 PABPC4L (ENSOCUG00000028226) ENSOCUG00000038661 Rabbit MODERN SPECIES 14 CYP7A1 (ENSOCUG00000012283) #11 UBXN2B (ENSOCUG00000023461) #12 FAM110B (ENSOCUG00000028224) #13 ENSOCUG00000035749 ENSOCUG00000034339 ENSOCUG00000034482 BPNT2 (ENSOCUG00000004428) #14 ENSOCUG00000033892 ENSOCUG00000012122 ENSOCUG00000007052 #16 ENSOCUG00000023853 #17 SDR16C5 (ENSOCUG00000009657) #18 ENSOCUG00000036164 #19 PLAG1 (ENSOCUG00000006001) #20 MOS (ENSOCUG00000014049) #21 ENSOCUG00000003068 #22 LYN (ENSOCUG00000003056) #24 TGS1 (ENSOCUG00000017522) #26 TMEM68 (ENSOCUG00000017517) #27 ENSOCUG00000027524 XKR4 (ENSOCUG00000017875) #28 RP1 (ENSOCUG00000015022) #29 ENSOCUG00000037040 #30 ENSOCUG00000012651 #30 ENSOCUG00000008012 MRPL15 (ENSOCUG00000001949) #33 LYPLA1 (ENSOCUG00000006751) ENSOCUG00000001051 #36 ATP6V1H (ENSOCUG00000016298) OPRK1 (ENSOCUG00000003120) NPBWR1 (ENSOCUG00000028231) Rabbit DUPLICATION Rabbit MODERN SPECIES ENSOCUG00000030357 ENSOCUG00000038359 ENSOCUG00000030169 ENSOCUG00000037426 ENSOCUG00000031086 INSL6 (ENSOCUG00000013682) ENSOCUG00000037721 JAK2 (ENSOCUG00000016853) RCL1 (ENSOCUG00000008161) ENSOCUG00000013279 ENSOCUG00000011411 CDC37L1 (ENSOCUG00000003468) SPATA6L (ENSOCUG00000003455) PLPP6 (ENSOCUG00000003465) ENSOCUG00000022202 ENSOCUG00000026987 #22 ENSOCUG00000013264 ENSOCUG00000036407 GLIS3 (ENSOCUG00000023004) ENSOCUG00000027590 ENSOCUG00000023393 RFX3 (ENSOCUG00000014086) ENSOCUG00000039572 ENSOCUG00000004189 KCNV2 (ENSOCUG00000004385) VLDLR (ENSOCUG00000002231) ENSOCUG00000022775 SMARCA2 (ENSOCUG00000006320) ENSOCUG00000000241 ENSOCUG00000035677 ENSOCUG00000023438 Rabbit MODERN SPECIES 5 KCNMB3 (ENSOCUG00000010643) MFN1 (ENSOCUG00000000928) GNB4 (ENSOCUG00000000931) ACTL6A (ENSOCUG00000017883) MRPL47 (ENSOCUG00000017886) NDUFB5 (ENSOCUG00000017887) USP13 (ENSOCUG00000006043) ENSOCUG00000039309 PEX5L (ENSOCUG00000006053) TTC14 (ENSOCUG00000000806) CCDC39 (ENSOCUG00000000812) FXR1 (ENSOCUG00000023518) DNAJC19 (ENSOCUG00000014043) ENSOCUG00000035765 ENSOCUG00000031658 ENSOCUG00000028029 #22 ATP11B (ENSOCUG00000012358) DCUN1D1 (ENSOCUG00000012386) MCCC1 (ENSOCUG00000012393) ENSOCUG00000005563 RFC4 (ENSOCUG00000005014) ENSOCUG00000005011 ENSOCUG00000031344 KNG1 (ENSOCUG00000005003) HRG (ENSOCUG00000011687) FETUB (ENSOCUG00000001032) AHSG (ENSOCUG00000002057) DNAJB11 (ENSOCUG00000002053) TBCCD1 (ENSOCUG00000002050) CRYGS (ENSOCUG00000022375) DGKG (ENSOCUG00000005238) Rodentia DUPLICATION Rodentia DUPLICATION Rodentia DUPLICATION Rodentia ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a #22 Rodentia_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a #22 Myomorpha ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a #22 Muroidea ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a #22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a #22 Murinae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a #22 Mus ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a #22 Mus_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a #22 Mus_B ANCESTRAL SPECIES 22 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000154383.s.a ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00940000158011 #24 ENSGT00390000018056.f #26 ENSGT00390000011782 #27 Mus_C ANCESTRAL SPECIES 2 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000154383.s.a ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00940000158011 #24 ENSGT00390000018056.f #26 ENSGT00390000011782 #27 Steppe mouse MODERN SPECIES 3083 ENSMSIG00000023749 Cyp7a1 (ENSMSIG00000023757) #11 Ubxn2b (ENSMSIG00000023768) #12 ENSMSIG00000023784 Fam110b (ENSMSIG00000023787) #13 ENSMSIG00000023798 ENSMSIG00000023802 Bpnt2 (ENSMSIG00000023807) #14 ENSMSIG00000023818 Penk (ENSMSIG00000023830) #16 Sdr16c6 (ENSMSIG00000023838) #17 Sdr16c5 (ENSMSIG00000023861) #18 Chchd7 (ENSMSIG00000023876) #19 Plag1 (ENSMSIG00000023923) #20 Mos (ENSMSIG00000023932) #21 ENSMSIG00000023940 #22 spretus MODERN SPECIES 13 Rab2a (MGP_SPRETEiJ_G0026744) Car8 (MGP_SPRETEiJ_G0026743) Tox (MGP_SPRETEiJ_G0026742) #7 Nsmaf (MGP_SPRETEiJ_G0026741) #8 Sdcbp (MGP_SPRETEiJ_G0026740) #9 Cyp7a1 (MGP_SPRETEiJ_G0026739) #11 Ubxn2b (MGP_SPRETEiJ_G0026738) #12 Fam110b (MGP_SPRETEiJ_G0026737) #13 MGP_SPRETEiJ_G0026736 #14 Penk (MGP_SPRETEiJ_G0026735) #16 Sdr16c6 (MGP_SPRETEiJ_G0026734) #17 Sdr16c5 (MGP_SPRETEiJ_G0026733) #18 Chchd7 (MGP_SPRETEiJ_G0026732) #19 Plag1 (MGP_SPRETEiJ_G0026731) #20 Mos (MGP_SPRETEiJ_G0026730) #21 Rps20 (MGP_SPRETEiJ_G0026729) #22 Lyn (MGP_SPRETEiJ_G0026728) #24 Tgs1 (MGP_SPRETEiJ_G0026727) #26 MGP_SPRETEiJ_G0026726 #26 MGP_SPRETEiJ_G0026725 Rat MODERN SPECIES 19 RGD1559960 (ENSRNOG00000068175) ENSRNOG00000069656 Sult1c2a (ENSRNOG00000042111) LOC102551938 (ENSRNOG00000067413) LOC120093086 (ENSRNOG00000065530) LOC301165 (ENSRNOG00000046714) Sgo1 (ENSRNOG00000022499) Kat2b (ENSRNOG00000011871) Pp2d1 (ENSRNOG00000004719) Rab5a (ENSRNOG00000057056) LOC103690615 (ENSRNOG00000000124) Efhb (ENSRNOG00000012618) LOC689479 (ENSRNOG00000046576) Kcnh8 (ENSRNOG00000058626) Satb1 (ENSRNOG00000012942) Rps20-ps11 (ENSRNOG00000030345) #22 Tbc1d5 (ENSRNOG00000010637) Plcl2 (ENSRNOG00000013368) ENSRNOG00000064269 LOC120094619 (ENSRNOG00000063528) AABR07066416.2 (ENSRNOG00000046104) ENSRNOG00000070668 LOC120093071 (ENSRNOG00000049503) ENSRNOG00000070131 LOC120094615 (ENSRNOG00000068213) LOC120094611 (ENSRNOG00000066837) LOC108351878 (ENSRNOG00000062425) LOC100360856 (ENSRNOG00000047581) LOC120094612 (ENSRNOG00000064783) LOC120094606 (ENSRNOG00000067046) ENSRNOG00000066561 Cricetidae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a #22 Cricetidae_B ANCESTRAL SPECIES 50 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000154383.s.a ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00390000003248.a.a.a.b.db.d #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Northern American deer mouse MODERN SPECIES 11 Car8 (ENSPEMG00000019908) Tox (ENSPEMG00000019966) #7 Nsmaf (ENSPEMG00000019696) #8 Sdcbp (ENSPEMG00000020043) #9 Cyp7a1 (ENSPEMG00000019921) #11 Ubxn2b (ENSPEMG00000028233) #12 Fam110b (ENSPEMG00000028969) #13 Bpnt2 (ENSPEMG00000000461) #14 ENSPEMG00000015262 Penk (ENSPEMG00000016794) #16 Sdr16c6 (ENSPEMG00000023129) #17 Sdr16c5 (ENSPEMG00000021917) #18 ENSPEMG00000023256 Plag1 (ENSPEMG00000027390) #20 Mos (ENSPEMG00000008516) #21 ENSPEMG00000029829 #22 Lyn (ENSPEMG00000021545) #24 ENSPEMG00000029859 Tgs1 (ENSPEMG00000007957) #26 Tmem68 (ENSPEMG00000021534) #27 ENSPEMG00000030336 Xkr4 (ENSPEMG00000021985) #28 Rp1 (ENSPEMG00000013397) #29 ENSPEMG00000014386 ENSPEMG00000026817 Sox17 (ENSPEMG00000030488) #30 Mrpl15 (ENSPEMG00000000583) #33 ENSPEMG00000027695 ENSPEMG00000014138 Tcea1 (ENSPEMG00000023948) #35 Rgs20 (ENSPEMG00000009893) #36 Rodentia_A ANCESTRAL SPECIES 18 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a Sciuridae ANCESTRAL SPECIES 17 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a Eurasian red squirrel MODERN SPECIES CA8 (ENSSVLG00005012006) TOX (ENSSVLG00005011958) #7 NSMAF (ENSSVLG00005011910) #8 SDCBP (ENSSVLG00005011445) #9 CYP7A1 (ENSSVLG00005011337) #11 UBXN2B (ENSSVLG00005011261) #12 FAM110B (ENSSVLG00005011236) #13 BPNT2 (ENSSVLG00005011167) #14 PENK (ENSSVLG00005011127) #16 ENSSVLG00005010971 #17 SDR16C5 (ENSSVLG00005010895) #18 ENSSVLG00005010860 CHCHD7 (ENSSVLG00005010790) #19 PLAG1 (ENSSVLG00005010731) #20 MOS (ENSSVLG00005010710) #21 RPS20 (ENSSVLG00005010588) #22 LYN (ENSSVLG00005010475) #24 TGS1 (ENSSVLG00005010446) #26 ENSSVLG00005010412 ENSSVLG00005010285 #27 XKR4 (ENSSVLG00005010234) #28 RP1 (ENSSVLG00005009858) #29 SOX17 (ENSSVLG00005009789) #30 MRPL15 (ENSSVLG00005009764) #33 ENSSVLG00005009666 ENSSVLG00005009646 TCEA1 (ENSSVLG00005009501) #35 RGS20 (ENSSVLG00005009394) #36 ENSSVLG00005009360 ATP6V1H (ENSSVLG00005009299) ENSSVLG00005009270 Marmotini ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a #22 Marmotini_b ANCESTRAL SPECIES 52 ENSGT00940000157108 ENSGT00940000159307 ENSGT00940000155894 ENSGT00390000005870 ENSGT00940000157544 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a Arctic ground squirrel MODERN SPECIES 137 RPS20 (ENSUPAG00010002625) #22 LYN (ENSUPAG00010002635) #24 TMEM68 (ENSUPAG00010002929) #27 XKR4 (ENSUPAG00010002936) #28 RP1 (ENSUPAG00010002942) #29 ENSUPAG00010002961 SOX17 (ENSUPAG00010002964) #30 MRPL15 (ENSUPAG00010002973) #33 LYPLA1 (ENSUPAG00010002986) TCEA1 (ENSUPAG00010003008) #35 ENSUPAG00010003023 RGS20 (ENSUPAG00010003027) #36 ATP6V1H (ENSUPAG00010003037) OPRK1 (ENSUPAG00010003107) ENSUPAG00010003124 NPBWR1 (ENSUPAG00010003128) Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00390000003248.a.b.b ##22 ENSGT00390000003248.a.a.a.b.cb.b.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185.cb ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00390000003248.a.a.a.b.cb.b.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185.cb ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.v Guinea pig MODERN SPECIES 64 FAM110B (ENSCPOG00000033617) #13 BPNT2 (ENSCPOG00000023705) #14 PENK (ENSCPOG00000031786) #16 ENSCPOG00000020018 #17 SDR16C5 (ENSCPOG00000000571) #18 CHCHD7 (ENSCPOG00000030280) #19 PLAG1 (ENSCPOG00000039131) #20 MOS (ENSCPOG00000020476) #21 ENSCPOG00000011697 #22 ENSCPOG00000030320 LYN (ENSCPOG00000011693) #24 TGS1 (ENSCPOG00000009713) #26 TMEM68 (ENSCPOG00000019826) #27 XKR4 (ENSCPOG00000003676) #28 ENSCPOG00000039324 #29 SOX17 (ENSCPOG00000000892) #30 MRPL15 (ENSCPOG00000035946) #33 LYPLA1 (ENSCPOG00000022715) TCEA1 (ENSCPOG00000005886) #35 ENSCPOG00000038533 #36 ENSCPOG00000022816 ATP6V1H (ENSCPOG00000012174) ENSCPOG00000023180 OPRK1 (ENSCPOG00000006607) Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a #22 Degu MODERN SPECIES 126 ENSODEG00000019073 #22 ENSODEG00000004554 ENSODEG00000005181 HMMR (ENSODEG00000004387) ENSODEG00000004867 ENSODEG00000005448 TENM2 (ENSODEG00000005069) WWC1 (ENSODEG00000004850) RARS1 (ENSODEG00000005980) ENSODEG00000005759 FBLL1 (ENSODEG00000019199) PANK3 (ENSODEG00000005503) SLIT3 (ENSODEG00000005145) ENSODEG00000006240 INSYN2B (ENSODEG00000006097) DOCK2 (ENSODEG00000004282) Rodentia ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b #22 Rodentia_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b #22 Myomorpha ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b #22 Muroidea ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b #22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b #22 Murinae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b #22 Rat DUPLICATION Rat MODERN SPECIES 13 ENSRNOG00000067722 Pdcl (ENSRNOG00000008484) Rc3h2 (ENSRNOG00000009196) Zbtb6 (ENSRNOG00000009340) Zbtb26 (ENSRNOG00000009346) Rabgap1 (ENSRNOG00000009402) Gpr21 (ENSRNOG00000042269) Strbp (ENSRNOG00000010150) RGD1561137 (ENSRNOG00000030143) Crb2 (ENSRNOG00000025498) Dennd1a (ENSRNOG00000010526) Lhx2 (ENSRNOG00000010551) Nek6 (ENSRNOG00000010897) Psmb7 (ENSRNOG00000011732) ENSRNOG00000066446 Rps20 (ENSRNOG00000029627) #22 Nr5a1 (ENSRNOG00000012682) Nr6a1 (ENSRNOG00000013232) Olfml2a (ENSRNOG00000014034) Wdr38 (ENSRNOG00000014102) Rpl35 (ENSRNOG00000014272) Arpc5l (ENSRNOG00000014317) Golga1 (ENSRNOG00000014493) Scai (ENSRNOG00000025278) Ppp6c (ENSRNOG00000015145) AABR07051831.1 (ENSRNOG00000015854) LOC100362366 (ENSRNOG00000028690) Lrp1b (ENSRNOG00000030243) Kynu (ENSRNOG00000029993) Arhgap15 (ENSRNOG00000031168) Gtdc1 (ENSRNOG00000031038) Rat MODERN SPECIES 15 Cyp7a1 (ENSRNOG00000009488) #11 Ubxn2b (ENSRNOG00000071045) #12 ENSRNOG00000063053 Fam110b (ENSRNOG00000009114) #13 ENSRNOG00000069204 Bpnt2 (ENSRNOG00000046647) #14 RGD1563405 (ENSRNOG00000069142) Penk (ENSRNOG00000008943) #16 Sdr16c6 (ENSRNOG00000067216) #17 Sdr16c6 (ENSRNOG00000040151) #17 Sdr16c5 (ENSRNOG00000008871) #18 Chchd7 (ENSRNOG00000031769) Plag1 (ENSRNOG00000008846) #20 LOC100364265 (ENSRNOG00000012088) Mos (ENSRNOG00000008567) #21 Rps20-ps10 (ENSRNOG00000008555) #22 Lyn (ENSRNOG00000008180) #24 Tgs1 (ENSRNOG00000008156) #26 Tmem68 (ENSRNOG00000008872) #27 Xkr4 (ENSRNOG00000027276) #28 Cyld-ps1 (ENSRNOG00000008861) Rp1 (ENSRNOG00000008807) #29 ENSRNOG00000065942 Sumo4 (ENSRNOG00000069967) Sox17 (ENSRNOG00000027357) #30 Mrpl15 (ENSRNOG00000008566) #33 Lypla1 (ENSRNOG00000008320) Tcea1 (ENSRNOG00000022323) #35 Rgs20 (ENSRNOG00000008100) #36 Atp6v1h (ENSRNOG00000030862) Oprk1 (ENSRNOG00000007647) Cricetidae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b #22 Northern American deer mouse MODERN SPECIES 10 Tmx3 (ENSPEMG00000011968) ENSPEMG00000030219 Dok6 (ENSPEMG00000019316) Cd226 (ENSPEMG00000029583) Rttn (ENSPEMG00000019864) ENSPEMG00000027089 Socs6 (ENSPEMG00000009086) ENSPEMG00000009228 ##12 ENSPEMG00000004621 ENSPEMG00000028176 Cbln2 (ENSPEMG00000024653) Neto1 (ENSPEMG00000021247) ENSPEMG00000026675 ENSPEMG00000030444 #22 Fbxo15 (ENSPEMG00000003160) Timm21 (ENSPEMG00000024475) Cyb5a (ENSPEMG00000020270) Gm17266 (ENSPEMG00000031219) Dipk1c (ENSPEMG00000019790) Cndp2 (ENSPEMG00000020038) Cndp1 (ENSPEMG00000017304) Zfp407 (ENSPEMG00000019754) Zadh2 (ENSPEMG00000028418) Tshz1 (ENSPEMG00000022838) Zfp516 (ENSPEMG00000024000) ENSPEMG00000024427 Zfp236 (ENSPEMG00000026320) Mbp (ENSPEMG00000021451) Galr1 (ENSPEMG00000022914) Rodentia DUPLICATION Rodentia ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a #22 Rodentia_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a #22 Myomorpha ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a #22 Muroidea ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a #22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a #22 Murinae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a #22 Rat MODERN SPECIES 15 Reck (ENSRNOG00000014863) Or13c7 (ENSRNOG00000068857) Or13c7c (ENSRNOG00000070597) Or13c7b (ENSRNOG00000063480) Or13c7e (ENSRNOG00000065792) Or13c7d (ENSRNOG00000062897) ENSRNOG00000070391 Hrct1 (ENSRNOG00000039336) Or13j1 (ENSRNOG00000066545) Or13e8 (ENSRNOG00000015652) Tmem8b (ENSRNOG00000015664) Fam221b (ENSRNOG00000025453) Hint2 (ENSRNOG00000015866) Spag8 (ENSRNOG00000032539) Npr2 (ENSRNOG00000015991) RGD1562259 (ENSRNOG00000070923) #22 Msmp (ENSRNOG00000043023) Rgp1 (ENSRNOG00000016309) Gba2 (ENSRNOG00000016364) Creb3 (ENSRNOG00000016452) Tln1 (ENSRNOG00000016630) Tpm2 (ENSRNOG00000016731) Car9 (ENSRNOG00000017073) Arhgef39 (ENSRNOG00000021433) Ccdc107 (ENSRNOG00000017253) Sit1 (ENSRNOG00000021546) RGD1560723 (ENSRNOG00000063741) Cd72 (ENSRNOG00000017485) Tesk1 (ENSRNOG00000053729) Fam166b (ENSRNOG00000065204) Rusc2 (ENSRNOG00000045843) Rodentia ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00390000003248.a.b.b ##22 ENSGT00390000003248.a.a.a.b.cb.b.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185.cb ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.v ENSGT00940000159969.a Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00390000003248.a.a.a.b.cb.b.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185.cb ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.v ENSGT00940000159969.a Hystricomorpha_b ANCESTRAL SPECIES 27 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00390000003248.a.a.a.b.cb.b.b #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00390000009040 #33 ENSGT00940000154185.bb.a ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.v ENSGT00940000159969.a ENSGT00940000159905 Long-tailed chinchilla MODERN SPECIES 161 NSMAF (ENSCLAG00000013661) #8 SDCBP (ENSCLAG00000013259) #9 CYP7A1 (ENSCLAG00000012771) #11 UBXN2B (ENSCLAG00000011369) #12 ENSCLAG00000010131 #14 PENK (ENSCLAG00000017733) #16 ENSCLAG00000009495 #17 SDR16C5 (ENSCLAG00000012258) #18 CHCHD7 (ENSCLAG00000009729) #19 PLAG1 (ENSCLAG00000013839) #20 RPS20 (ENSCLAG00000015938) #22 LYN (ENSCLAG00000010085) #24 TGS1 (ENSCLAG00000009468) #26 TMEM68 (ENSCLAG00000009473) #27 XKR4 (ENSCLAG00000010575) #28 ENSCLAG00000011553 #29 MRPL15 (ENSCLAG00000010064) #33 ENSCLAG00000014943 TCEA1 (ENSCLAG00000013516) #35 ENSCLAG00000016009 #36 ATP6V1H (ENSCLAG00000009337) OPRK1 (ENSCLAG00000009850) ENSCLAG00000009340 RB1CC1 (ENSCLAG00000009807) ENSCLAG00000014346 ST18 (ENSCLAG00000011202) Rodentia_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Myomorpha ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Lesser Egyptian jerboa MODERN SPECIES 51 Chd7 (ENSJJAG00000022064) Rab2a (ENSJJAG00000000676) Car8 (ENSJJAG00000000356) Tox (ENSJJAG00000023957) #7 Nsmaf (ENSJJAG00000018732) #8 Sdcbp (ENSJJAG00000008505) #9 Cyp7a1 (ENSJJAG00000009993) #11 Ubxn2b (ENSJJAG00000017241) #12 Fam110b (ENSJJAG00000011482) #13 Bpnt2 (ENSJJAG00000016357) #14 Penk (ENSJJAG00000012141) #16 Sdr16c6 (ENSJJAG00000005653) #17 Sdr16c5 (ENSJJAG00000012889) #18 Chchd7 (ENSJJAG00000004951) #19 Plag1 (ENSJJAG00000008706) #20 ENSJJAG00000000512 #22 Lyn (ENSJJAG00000014669) #24 Tgs1 (ENSJJAG00000016239) #26 Tmem68 (ENSJJAG00000009727) #27 ENSJJAG00000003859 Xkr4 (ENSJJAG00000013870) #28 ENSJJAG00000015642 #29 ENSJJAG00000012132 Sox17 (ENSJJAG00000021381) #30 Mrpl15 (ENSJJAG00000016599) #33 ENSJJAG00000019339 Tcea1 (ENSJJAG00000020282) #35 Rgs20 (ENSJJAG00000004359) #36 Atp6v1h (ENSJJAG00000018257) Oprk1 (ENSJJAG00000019887) ENSJJAG00000011904 Muroidea ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Cricetidae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Prairie vole MODERN SPECIES 356 Spata4 (ENSMOCG00000003714) Asb5 (ENSMOCG00000022930) Spcs3 (ENSMOCG00000022872) Vegfc (ENSMOCG00000021548) ENSMOCG00000007262 ENSMOCG00000018728 Aga (ENSMOCG00000014844) Tenm3 (ENSMOCG00000020342) Dctd (ENSMOCG00000015038) ENSMOCG00000005387 ENSMOCG00000003820 Cldn22 (ENSMOCG00000006954) ENSMOCG00000008252 Cdkn2aip (ENSMOCG00000016713) Ing2 (ENSMOCG00000005078) ENSMOCG00000004967 #22 Rwdd4a (ENSMOCG00000002163) Trappc11 (ENSMOCG00000015798) Stox2 (ENSMOCG00000006233) Enpp6 (ENSMOCG00000021517) Irf2 (ENSMOCG00000013068) Casp3 (ENSMOCG00000011756) Primpol (ENSMOCG00000006815) Cenpu (ENSMOCG00000004846) Acsl1 (ENSMOCG00000008489) Helt (ENSMOCG00000012330) ENSMOCG00000009524 Cfap97 (ENSMOCG00000005943) Snx25 (ENSMOCG00000012866) Lrp2bp (ENSMOCG00000014647) Ankrd37 (ENSMOCG00000011842) Murinae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Rat MODERN SPECIES 18 Htr1b (ENSRNOG00000013042) Mei4 (ENSRNOG00000023794) Irak1bp1 (ENSRNOG00000008984) Phip (ENSRNOG00000008652) Hmgn3 (ENSRNOG00000031032) Lca5 (ENSRNOG00000009580) Sh3bgrl2 (ENSRNOG00000009613) Sh3bgrl2 (ENSRNOG00000068670) ENSRNOG00000066197 Elovl4 (ENSRNOG00000009773) Ttk (ENSRNOG00000029055) Bckdhb (ENSRNOG00000009928) RGD1560917 (ENSRNOG00000034128) Tent5a (ENSRNOG00000010240) Ibtk (ENSRNOG00000027728) LOC100359563 (ENSRNOG00000029843) #22 Tpbg (ENSRNOG00000010694) Ube3d (ENSRNOG00000010802) Dop1a (ENSRNOG00000022847) Pgm3 (ENSRNOG00000009515) Rwdd2a (ENSRNOG00000009599) Me1 (ENSRNOG00000009715) Prss35 (ENSRNOG00000025184) Snap91 (ENSRNOG00000023861) Ripply2 (ENSRNOG00000010004) Cyb5r4 (ENSRNOG00000010024) Mrap2 (ENSRNOG00000010545) Cep162 (ENSRNOG00000010608) Tbx18 (ENSRNOG00000010685) Gabarapl2 (ENSRNOG00000051416) Nt5e (ENSRNOG00000011071) Rodentia ANCESTRAL SPECIES 19 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Rodentia_B ANCESTRAL SPECIES 17 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Kangaroo rat MODERN SPECIES 328 Nsmaf (ENSDORG00000006742) #8 Sdcbp (ENSDORG00000006741) #9 Cyp7a1 (ENSDORG00000004649) #11 Ubxn2b (ENSDORG00000005860) #12 ENSDORG00000026451 Fam110b (ENSDORG00000015721) #13 ENSDORG00000025951 Bpnt2 (ENSDORG00000015489) #14 Penk (ENSDORG00000011721) #16 Sdr16c6 (ENSDORG00000026488) #17 Sdr16c5 (ENSDORG00000004594) #18 ENSDORG00000025931 Chchd7 (ENSDORG00000004592) #19 Plag1 (ENSDORG00000011524) #20 ENSDORG00000029409 Rps20 (ENSDORG00000005794) #22 Lyn (ENSDORG00000000747) #24 Tgs1 (ENSDORG00000012484) #26 ENSDORG00000012483 #27 Xkr4 (ENSDORG00000005763) #28 Rp1 (ENSDORG00000009139) #29 Sox17 (ENSDORG00000027735) #30 Mrpl15 (ENSDORG00000012200) #33 Lypla1 (ENSDORG00000001479) Tcea1 (ENSDORG00000015058) #35 ENSDORG00000006333 #36 Atp6v1h (ENSDORG00000007689) Oprk1 (ENSDORG00000009506) Npbwr1 (ENSDORG00000013949) ENSDORG00000005679 ENSDORG00000029422 Myomorpha ANCESTRAL SPECIES 18 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Lesser Egyptian jerboa MODERN SPECIES 144 Hipk1 (ENSJJAG00000023146) Olfml3 (ENSJJAG00000021371) Syt6 (ENSJJAG00000020309) Trim33 (ENSJJAG00000012942) ENSJJAG00000007313 Dennd2c (ENSJJAG00000009709) Ampd1 (ENSJJAG00000021675) ENSJJAG00000020941 Csde1 (ENSJJAG00000019571) ENSJJAG00000019089 Nr1h5 (ENSJJAG00000018578) ENSJJAG00000018067 Tshb (ENSJJAG00000001329) Tspan2 (ENSJJAG00000000832) Ngf (ENSJJAG00000022901) ENSJJAG00000021722 #22 Vangl1 (ENSJJAG00000021462) Casq2 (ENSJJAG00000020862) Nhlh2 (ENSJJAG00000019983) Slc22a15 (ENSJJAG00000000255) Mab21l3 (ENSJJAG00000022482) Atp1a1 (ENSJJAG00000020791) Igsf3 (ENSJJAG00000017489) Cd2 (ENSJJAG00000019842) Ptgfrn (ENSJJAG00000019616) Ttf2 (ENSJJAG00000015225) Trim45 (ENSJJAG00000007227) Vtcn1 (ENSJJAG00000019207) ENSJJAG00000018170 Man1a2 (ENSJJAG00000017865) Tent5c (ENSJJAG00000013174) Muroidea ANCESTRAL SPECIES 14 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000154383.s.a ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Murinae ANCESTRAL SPECIES 2 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000154383.s.a ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a Rat DUPLICATION Rat MODERN SPECIES 15 Tmem82 (ENSRNOG00000011970) Plekhm2 (ENSRNOG00000012163) Ddi2 (ENSRNOG00000012274) Agmat (ENSRNOG00000012315) Dnajc16 (ENSRNOG00000012503) Casp9 (ENSRNOG00000012944) Cela2a (ENSRNOG00000013628) Ctrc (ENSRNOG00000013745) Efhd2 (ENSRNOG00000013783) Fhad1 (ENSRNOG00000028064) Tmem51 (ENSRNOG00000014197) ENSRNOG00000070661 Kazn (ENSRNOG00000014322) 6330411D24Rik (ENSRNOG00000065736) Prdm2 (ENSRNOG00000033522) LOC100359951 (ENSRNOG00000071148) #22 ENSRNOG00000070725 Pdpn (ENSRNOG00000014961) Lrrc38 (ENSRNOG00000015264) Pramef27 (ENSRNOG00000027328) Pramef8 (ENSRNOG00000027278) Oog3 (ENSRNOG00000033000) Pramef5 (ENSRNOG00000067307) ENSRNOG00000065869 Oog1 (ENSRNOG00000027142) LOC120103107 (ENSRNOG00000047341) RGD1306186 (ENSRNOG00000037039) Pramef17 (ENSRNOG00000042820) Pramef25 (ENSRNOG00000027000) Pramef20 (ENSRNOG00000053942) Pramef12 (ENSRNOG00000037035) Rat MODERN SPECIES 10 Tat (ENSRNOG00000016348) Marveld3 (ENSRNOG00000016291) Phlpp2 (ENSRNOG00000016108) Ap1g1 (ENSRNOG00000069458) Atxn1l (ENSRNOG00000038766) Zfp821 (ENSRNOG00000000262) Ist1 (ENSRNOG00000015144) Pkd1l3 (ENSRNOG00000052310) Dhodh (ENSRNOG00000015063) Hp (ENSRNOG00000014964) ENSRNOG00000063716 Txnl4b (ENSRNOG00000021379) Dhx38 (ENSRNOG00000014619) Pmfbp1 (ENSRNOG00000014505) Zfhx3 (ENSRNOG00000014452) LOC679899 (ENSRNOG00000069342) #22 Psmd7 (ENSRNOG00000014097) Wwp2 (ENSRNOG00000012937) Nob1 (ENSRNOG00000021890) Nqo1 (ENSRNOG00000012772) Nfat5 (ENSRNOG00000011879) Cyb5b (ENSRNOG00000011142) Terf2 (ENSRNOG00000020435) Tmed6 (ENSRNOG00000020406) Nip7 (ENSRNOG00000020391) Cog8 (ENSRNOG00000020379) Pdf (ENSRNOG00000022303) Vps4a (ENSRNOG00000020351) Sntb2 (ENSRNOG00000020344) Utp4 (ENSRNOG00000020333) Chtf8 (ENSRNOG00000047246) Mus ANCESTRAL SPECIES 3 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000154383.s.a ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT01100000265193 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a Shrew mouse MODERN SPECIES 14 Rab2a (MGP_PahariEiJ_G0023919) Car8 (MGP_PahariEiJ_G0023918) Tox (MGP_PahariEiJ_G0023917) #7 Nsmaf (MGP_PahariEiJ_G0023916) #8 Sdcbp (MGP_PahariEiJ_G0023915) #9 Cyp7a1 (MGP_PahariEiJ_G0023914) #11 Ubxn2b (MGP_PahariEiJ_G0023913) #12 Fam110b (MGP_PahariEiJ_G0023912) #13 Bpnt2 (MGP_PahariEiJ_G0023911) #14 Penk (MGP_PahariEiJ_G0023910) #16 Sdr16c6 (MGP_PahariEiJ_G0023909) #17 Sdr16c5 (MGP_PahariEiJ_G0023908) #18 Chchd7 (MGP_PahariEiJ_G0023907) #19 Plag1 (MGP_PahariEiJ_G0023906) #20 Mos (MGP_PahariEiJ_G0023905) #21 Rps20 (MGP_PahariEiJ_G0023904) #22 Lyn (MGP_PahariEiJ_G0023903) #24 MGP_PahariEiJ_G0023902 #26 MGP_PahariEiJ_G0023901 #26 MGP_PahariEiJ_G0023900 Xkr4 (MGP_PahariEiJ_G0023899) #28 Rp1 (MGP_PahariEiJ_G0023898) #29 Sox17 (MGP_PahariEiJ_G0023897) #30 Mrpl15 (MGP_PahariEiJ_G0023896) #33 Lypla1 (MGP_PahariEiJ_G0023895) MGP_PahariEiJ_G0023894 Tcea1 (MGP_PahariEiJ_G0023893) #35 Rgs20 (MGP_PahariEiJ_G0023892) #36 Atp6v1h (MGP_PahariEiJ_G0023891) Oprk1 (MGP_PahariEiJ_G0023890) Npbwr1 (MGP_PahariEiJ_G0023889) Mus_A ANCESTRAL SPECIES 3 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000154383.s.a ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00940000158011 #24 ENSGT00390000018056.f #26 ENSGT00390000011782 #27 Ryukyu mouse MODERN SPECIES 13 Rab2a (MGP_CAROLIEiJ_G0025796) Car8 (MGP_CAROLIEiJ_G0025795) Tox (MGP_CAROLIEiJ_G0025794) #7 Nsmaf (MGP_CAROLIEiJ_G0025793) #8 Sdcbp (MGP_CAROLIEiJ_G0025792) #9 Cyp7a1 (MGP_CAROLIEiJ_G0025791) #11 Ubxn2b (MGP_CAROLIEiJ_G0025790) #12 Fam110b (MGP_CAROLIEiJ_G0025789) #13 Bpnt2 (MGP_CAROLIEiJ_G0025788) #14 Penk (MGP_CAROLIEiJ_G0025787) #16 Sdr16c6 (MGP_CAROLIEiJ_G0025786) #17 Sdr16c5 (MGP_CAROLIEiJ_G0025785) #18 Chchd7 (MGP_CAROLIEiJ_G0025784) #19 Plag1 (MGP_CAROLIEiJ_G0025783) #20 Mos (MGP_CAROLIEiJ_G0025782) #21 Rps20 (MGP_CAROLIEiJ_G0025781) #22 MGP_CAROLIEiJ_G0025780 #26 MGP_CAROLIEiJ_G0025779 #26 Tmem68 (MGP_CAROLIEiJ_G0025778) #27 Mus_B ANCESTRAL SPECIES 22 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000154383.s.a ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00940000158011 #24 ENSGT00390000018056.f #26 ENSGT00390000011782 #27 Mus_C ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.db #22 Steppe mouse MODERN SPECIES 3284 ENSMSIG00000003831 Naaladl2 (ENSMSIG00000003840) ENSMSIG00000003888 ENSMSIG00000003917 #22 Tbl1xr1 (ENSMSIG00000003957) Mouse MODERN SPECIES 13 Car8 (ENSMUSG00000041261) Tox (ENSMUSG00000041272) #7 Nsmaf (ENSMUSG00000028245) #8 Sdcbp (ENSMUSG00000028249) #9 Cyp7a1 (ENSMUSG00000028240) #11 Ubxn2b (ENSMUSG00000028243) #12 Fam110b (ENSMUSG00000049119) #13 Bpnt2 (ENSMUSG00000066324) #14 Penk (ENSMUSG00000045573) #16 Sdr16c6 (ENSMUSG00000071019) #17 Sdr16c5 (ENSMUSG00000028236) #18 Gm11808 (ENSMUSG00000068240) Chchd7 (ENSMUSG00000042198) #19 Plag1 (ENSMUSG00000003282) #20 Mos (ENSMUSG00000078365) #21 Rps20 (ENSMUSG00000028234) #22 Lyn (ENSMUSG00000042228) #24 Tgs1 (ENSMUSG00000028233) #26 Tmem68 (ENSMUSG00000028232) #27 Vmn1r3 (ENSMUSG00000115466) Vmn1r2 (ENSMUSG00000115072) Cricetidae DUPLICATION Cricetidae DUPLICATION Cricetidae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.db.c.a #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.db.c.a #22 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 2 Cyp11b2 (ENSMOCG00000001733) Cyp11b1 (ENSMOCG00000020170) ENSMOCG00000015409 ENSMOCG00000008187 Nell2 (ENSMOCG00000002600) Ano6 (ENSMOCG00000018323) ENSMOCG00000016077 ENSMOCG00000019972 Scaf11 (ENSMOCG00000000678) Slc38a1 (ENSMOCG00000006739) Slc38a2 (ENSMOCG00000003601) Slc38a4 (ENSMOCG00000015247) Amigo2 (ENSMOCG00000013021) Pced1b (ENSMOCG00000005496) Rpap3 (ENSMOCG00000021033) ENSMOCG00000005623 #22 Endou (ENSMOCG00000015012) Rapgef3 (ENSMOCG00000002335) Slc48a1 (ENSMOCG00000013448) Hdac7 (ENSMOCG00000019731) ENSMOCG00000013472 Tmem106c (ENSMOCG00000016714) Col2a1 (ENSMOCG00000014833) ENSMOCG00000002706 ENSMOCG00000015383 Pfkm (ENSMOCG00000021333) Asb8 (ENSMOCG00000017776) Ccdc184 (ENSMOCG00000003788) ENSMOCG00000001175 ENSMOCG00000001245 Zfp641 (ENSMOCG00000019174) Prairie vole MODERN SPECIES 9 Tyr (ENSMOCG00000014094) ENSMOCG00000019618 Grm5 (ENSMOCG00000007786) Ctsc (ENSMOCG00000014577) Rab38 (ENSMOCG00000017329) Tmem135 (ENSMOCG00000018801) Fzd4 (ENSMOCG00000003180) ENSMOCG00000004372 Hddc3 (ENSMOCG00000010323) ENSMOCG00000017504 ENSMOCG00000012208 Fes (ENSMOCG00000015972) Furin (ENSMOCG00000010449) Blm (ENSMOCG00000016367) Crtc3 (ENSMOCG00000013330) ENSMOCG00000018309 #22 Iqgap1 (ENSMOCG00000008969) Zscan2 (ENSMOCG00000014314) Wdr73 (ENSMOCG00000015177) Nmb (ENSMOCG00000017100) Sec11a (ENSMOCG00000005585) Zfp592 (ENSMOCG00000019221) Alpk3 (ENSMOCG00000021545) Slc28a1 (ENSMOCG00000008190) Pde8a (ENSMOCG00000005246) Rps17 (ENSMOCG00000018582) Cpeb1 (ENSMOCG00000006902) Ap3b2 (ENSMOCG00000007121) BC048679 (ENSMOCG00000000682) ENSMOCG00000009343 Fsd2 (ENSMOCG00000015179) Cricetidae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.db.c.b #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.db.c.b #22 Prairie vole MODERN SPECIES 355 ENSMOCG00000005603 Tmem67 (ENSMOCG00000011860) Pdp1 (ENSMOCG00000014340) Cdh17 (ENSMOCG00000010844) Gem (ENSMOCG00000006722) Fsbp (ENSMOCG00000008704) Rad54b (ENSMOCG00000020035) Virma (ENSMOCG00000015388) Esrp1 (ENSMOCG00000013567) Dpy19l4 (ENSMOCG00000007197) Ints8 (ENSMOCG00000017112) Ccne2 (ENSMOCG00000001638) Trp53inp1 (ENSMOCG00000021132) Ndufaf6 (ENSMOCG00000015272) Plekhf2 (ENSMOCG00000002768) ENSMOCG00000002359 #22 Cfap418 (ENSMOCG00000019280) ENSMOCG00000000256 Gdf6 (ENSMOCG00000021011) Asph (ENSMOCG00000013819) Clvs1 (ENSMOCG00000013201) ENSMOCG00000010657 Chd7 (ENSMOCG00000011408) Rab2a (ENSMOCG00000014140) Car8 (ENSMOCG00000018985) Tox (ENSMOCG00000013368) #7 Nsmaf (ENSMOCG00000018628) #8 ENSMOCG00000014994 #9 Cyp7a1 (ENSMOCG00000004265) #11 Ubxn2b (ENSMOCG00000009288) #12 Fam110b (ENSMOCG00000010757) #13 Cricetinae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.db.c.b #22 Chinese hamster chok1gshd MODERN SPECIES 54 ENSCGRG00001013970 ENSCGRG00001004842 Nxph1 (ENSCGRG00001017708) Ica1 (ENSCGRG00001013759) Glcci1 (ENSCGRG00001020867) Umad1 (ENSCGRG00001019337) Rpa3 (ENSCGRG00001004183) Mios (ENSCGRG00001022654) Col28a1 (ENSCGRG00001018669) ENSCGRG00001016873 ASNS (ENSCGRG00001015428) Tac1 (ENSCGRG00001020738) Sdhaf3 (ENSCGRG00001012553) Dlx5 (ENSCGRG00001001362) Dlx6 (ENSCGRG00001015244) ENSCGRG00001016396 #22 Sem1 (ENSCGRG00001000539) ENSCGRG00001023047 Slc25a13 (ENSCGRG00001024718) ENSCGRG00001003096 ENSCGRG00001022786 Pdk4 (ENSCGRG00001014183) Asb4 (ENSCGRG00001002568) Pon2 (ENSCGRG00001017926) Pon3 (ENSCGRG00001017513) Pon1 (ENSCGRG00001017580) ENSCGRG00001022001 ENSCGRG00001012942 ENSCGRG00001010002 Sgce (ENSCGRG00001021015) Casd1 (ENSCGRG00001001133) Cricetidae ANCESTRAL SPECIES 2 ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000154383.s.a ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db.d #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Cricetinae ANCESTRAL SPECIES 31 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db.d #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000164647 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Chinese hamster chok1gshd MODERN SPECIES 136 Car8 (ENSCGRG00001016884) ENSCGRG00001015202 Tox (ENSCGRG00001012296) #7 Nsmaf (ENSCGRG00001000418) #8 Sdcbp (ENSCGRG00001024052) #9 Cyp7a1 (ENSCGRG00001023767) #11 Ubxn2b (ENSCGRG00001022571) #12 Fam110b (ENSCGRG00001016576) #13 Bpnt2 (ENSCGRG00001020859) #14 Penk (ENSCGRG00001017327) #16 Sdr16c6 (ENSCGRG00001015002) #17 Sdr16c5 (ENSCGRG00001012918) #18 Chchd7 (ENSCGRG00001011586) #19 Plag1 (ENSCGRG00001007120) #20 Mos (ENSCGRG00001001977) #21 ENSCGRG00001010356 #22 Lyn (ENSCGRG00001023003) #24 Tgs1 (ENSCGRG00001019470) #26 Tmem68 (ENSCGRG00001014894) #27 ENSCGRG00001014282 ENSCGRG00001013815 #28 ENSCGRG00001010786 #29 Sox17 (ENSCGRG00001009950) #30 ENSCGRG00001020498 #33 ENSCGRG00001016962 ENSCGRG00001000991 #35 Rgs20 (ENSCGRG00001023847) #36 Atp6v1h (ENSCGRG00001018456) Oprk1 (ENSCGRG00001014321) ENSCGRG00001013124 Npbwr1 (ENSCGRG00001001773) Cricetidae_B ANCESTRAL SPECIES 50 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00940000154383.s.a ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00390000003248.a.a.a.b.db.d #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a Prairie vole DUPLICATION Prairie vole MODERN SPECIES 12 Zfp821 (ENSMOCG00000021660) Ist1 (ENSMOCG00000001146) Pkd1l3 (ENSMOCG00000021954) ENSMOCG00000017444 ENSMOCG00000011833 Hp (ENSMOCG00000022096) Txnl4b (ENSMOCG00000013902) Dhx38 (ENSMOCG00000016798) Pmfbp1 (ENSMOCG00000008708) Zfhx3 (ENSMOCG00000017998) Psmd7 (ENSMOCG00000018363) Wwp2 (ENSMOCG00000019211) Nob1 (ENSMOCG00000010370) ENSMOCG00000009352 Cntnap4 (ENSMOCG00000005286) ENSMOCG00000010395 #22 Mon1b (ENSMOCG00000003753) Syce1l (ENSMOCG00000022883) Adamts18 (ENSMOCG00000015505) ENSMOCG00000010114 Nudt7 (ENSMOCG00000015530) Vat1l (ENSMOCG00000018479) Clec3a (ENSMOCG00000016149) Wwox (ENSMOCG00000013122) Maf (ENSMOCG00000017607) Dynlrb2 (ENSMOCG00000016123) Cdyl2 (ENSMOCG00000021578) ENSMOCG00000007353 Cenpn (ENSMOCG00000011952) Atmin (ENSMOCG00000020741) 1700030J22Rik (ENSMOCG00000021044) Prairie vole MODERN SPECIES 20 ENSMOCG00000000517 #22 Prairie vole MODERN SPECIES 355 Rab2a (ENSMOCG00000014140) Car8 (ENSMOCG00000018985) Tox (ENSMOCG00000013368) #7 Nsmaf (ENSMOCG00000018628) #8 ENSMOCG00000014994 #9 Cyp7a1 (ENSMOCG00000004265) #11 Ubxn2b (ENSMOCG00000009288) #12 Fam110b (ENSMOCG00000010757) #13 Bpnt2 (ENSMOCG00000015732) #14 ENSMOCG00000003270 Penk (ENSMOCG00000005168) #16 Sdr16c6 (ENSMOCG00000012126) #17 Sdr16c5 (ENSMOCG00000002710) #18 Chchd7 (ENSMOCG00000015783) #19 Plag1 (ENSMOCG00000015674) #20 ENSMOCG00000019980 #22 Lyn (ENSMOCG00000018677) #24 Tgs1 (ENSMOCG00000019560) #26 Tmem68 (ENSMOCG00000004085) #27 ENSMOCG00000017472 Xkr4 (ENSMOCG00000014076) #28 ENSMOCG00000003814 #29 ENSMOCG00000019449 #30 ENSMOCG00000021042 #30 Mrpl15 (ENSMOCG00000015777) #33 ENSMOCG00000018466 Lypla1 (ENSMOCG00000016895) Tcea1 (ENSMOCG00000018663) #35 Rgs20 (ENSMOCG00000021946) #36 Atp6v1h (ENSMOCG00000013542) Oprk1 (ENSMOCG00000021359) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1100 ENSNGAG00000012102 ENSNGAG00000013595 #22 Upper Galilee mountains blind mole rat MODERN SPECIES 826 ENSNGAG00000017707 Bpnt2 (ENSNGAG00000019142) #14 Penk (ENSNGAG00000011902) #16 Sdr16c6 (ENSNGAG00000012717) #17 Sdr16c5 (ENSNGAG00000013369) #18 Chchd7 (ENSNGAG00000013871) #19 Plag1 (ENSNGAG00000014522) #20 Mos (ENSNGAG00000015058) #21 ENSNGAG00000015253 #22 Lyn (ENSNGAG00000016075) #24 Tgs1 (ENSNGAG00000019532) #26 ENSNGAG00000020846 #27 Upper Galilee mountains blind mole rat MODERN SPECIES 1279 ENSNGAG00000021481 Hmg20a (ENSNGAG00000021385) Lingo1 (ENSNGAG00000021247) Odf3l1 (ENSNGAG00000020969) ENSNGAG00000020737 #22 Cspg4 (ENSNGAG00000019508) Snx33 (ENSNGAG00000019047) Imp3 (ENSNGAG00000017248) Snupn (ENSNGAG00000018735) Ptpn9 (ENSNGAG00000018454) Sin3a (ENSNGAG00000015781) Man2c1 (ENSNGAG00000015162) Neil1 (ENSNGAG00000012812) Commd4 (ENSNGAG00000007593) Rodentia_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.db #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.db #22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.db #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.db #22 Degu DUPLICATION Degu MODERN SPECIES 43 TGM7 (ENSODEG00000016365) ADAL (ENSODEG00000016433) ZSCAN29 (ENSODEG00000016691) TUBGCP4 (ENSODEG00000016217) TP53BP1 (ENSODEG00000016364) MAP1A (ENSODEG00000016751) PPIP5K1 (ENSODEG00000016403) ENSODEG00000016390 PDIA3 (ENSODEG00000016212) ENSODEG00000016295 HYPK (ENSODEG00000016700) MFAP1 (ENSODEG00000016397) ENSODEG00000016060 FRMD5 (ENSODEG00000016269) ENSODEG00000020502 ENSODEG00000016724 #22 GOLM2 (ENSODEG00000016663) ENSODEG00000016525 CTDSPL2 (ENSODEG00000016569) ENSODEG00000016386 SPG11 (ENSODEG00000016165) ENSODEG00000016509 ENSODEG00000015913 CEMIP (ENSODEG00000016192) ENSODEG00000016748 TLNRD1 (ENSODEG00000020545) CFAP161 (ENSODEG00000015893) ENSODEG00000016584 ENSODEG00000016326 STARD5 (ENSODEG00000015843) TMC3 (ENSODEG00000015805) Degu MODERN SPECIES 43 ENSODEG00000020443 CHP1 (ENSODEG00000016900) RTF1 (ENSODEG00000016921) ITPKA (ENSODEG00000016760) ENSODEG00000017041 ENSODEG00000020489 ENSODEG00000020390 MGA (ENSODEG00000017016) ENSODEG00000016967 JMJD7 (ENSODEG00000016738) EHD4 (ENSODEG00000016665) PLA2G4F (ENSODEG00000016568) VPS39 (ENSODEG00000016980) TMEM87A (ENSODEG00000016556) GANC (ENSODEG00000016815) ENSODEG00000017288 #22 CAPN3 (ENSODEG00000017103) ENSODEG00000016557 ENSODEG00000020344 ENSODEG00000016643 ENSODEG00000016623 ENSODEG00000016919 ENSODEG00000016844 CDAN1 (ENSODEG00000016883) ENSODEG00000016839 UBR1 (ENSODEG00000016879) TMEM62 (ENSODEG00000016864) ENSODEG00000017025 TGM5 (ENSODEG00000016333) TGM7 (ENSODEG00000016365) ADAL (ENSODEG00000016433) Guinea pig MODERN SPECIES 25 RCC1 (ENSCPOG00000010069) PHACTR4 (ENSCPOG00000003219) MED18 (ENSCPOG00000038084) SESN2 (ENSCPOG00000000236) ATP5IF1 (ENSCPOG00000030836) DNAJC8 (ENSCPOG00000014652) PTAFR (ENSCPOG00000031748) EYA3 (ENSCPOG00000012512) ENSCPOG00000033302 ##28 SMPDL3B (ENSCPOG00000008773) RPA2 (ENSCPOG00000008766) THEMIS2 (ENSCPOG00000033796) PPP1R8 (ENSCPOG00000036078) STX12 (ENSCPOG00000013160) FAM76A (ENSCPOG00000006186) ENSCPOG00000031828 #22 FGR (ENSCPOG00000015092) AHDC1 (ENSCPOG00000022607) WASF2 (ENSCPOG00000012376) GPR3 (ENSCPOG00000027123) CD164L2 (ENSCPOG00000022092) MAP3K6 (ENSCPOG00000012359) SYTL1 (ENSCPOG00000012354) TMEM222 (ENSCPOG00000020198) WDTC1 (ENSCPOG00000012347) SLC9A1 (ENSCPOG00000035897) TENT5B (ENSCPOG00000032542) KDF1 (ENSCPOG00000022999) NUDC (ENSCPOG00000010413) NR0B2 (ENSCPOG00000010409) GPATCH3 (ENSCPOG00000010404) Sciuridae ANCESTRAL SPECIES 17 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 #7 ENSGT00940000155059 #8 ENSGT00940000154502 #9 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00390000003248.a.a.a.b.cb.a.a #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 Marmotini ANCESTRAL SPECIES 10 ENSGT00940000157108 ENSGT00940000159307 ENSGT00940000155894 ENSGT00390000005870 ENSGT00940000157544 ENSGT00940000153141.B.a #11 ENSGT00520000055567.a.a.b #12 ENSGT00950000183056.B.b #13 ENSGT00940000160216 #14 ENSGT00950000183149.A #16 ENSGT00940000163618 #17 ENSGT00940000156731 #18 ENSGT00390000001029 #19 ENSGT00940000159246 #20 ENSGT00940000160233 #21 ENSGT00390000003248.a.a.a.b.db #22 ENSGT00940000158011 #24 ENSGT00390000018056 #26 ENSGT00390000011782 #27 ENSGT01070000253766.A.b #28 ENSGT00940000154242.b #29 ENSGT00940000156694 #30 ENSGT00390000009040 #33 ENSGT00940000154185 ENSGT00940000155121 #35 ENSGT00940000159123 #36 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a Alpin marmot MODERN SPECIES 16 ARFGEF1 (ENSMMMG00000001982) CPA6 (ENSMMMG00000001953) PREX2 (ENSMMMG00000001880) C8orf34 (ENSMMMG00000001709) ENSMMMG00000001538 CYP7A1 (ENSMMMG00000001515) #11 UBXN2B (ENSMMMG00000001510) #12 FAM110B (ENSMMMG00000001495) #13 ENSMMMG00000001477 #14 PENK (ENSMMMG00000001467) #16 ENSMMMG00000001408 #17 SDR16C5 (ENSMMMG00000001394) #18 CHCHD7 (ENSMMMG00000001389) #19 PLAG1 (ENSMMMG00000001377) #20 MOS (ENSMMMG00000001371) #21 RPS20 (ENSMMMG00000001350) #22 LYN (ENSMMMG00000001265) #24 TGS1 (ENSMMMG00000001130) #26 TMEM68 (ENSMMMG00000001093) #27 RP1 (ENSMMMG00000001046) #29 ENSMMMG00000001041 SOX17 (ENSMMMG00000001029) #30 ENSMMMG00000001024 MRPL15 (ENSMMMG00000001003) #33 LYPLA1 (ENSMMMG00000000994) TCEA1 (ENSMMMG00000000970) #35 ATP6V1H (ENSMMMG00000000819) OPRK1 (ENSMMMG00000000792) ENSMMMG00000000769 ENSMMMG00000000761 NPBWR1 (ENSMMMG00000000755)