Rodentia DUPLICATION Rodentia DUPLICATION Rodentia ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000159497 ENSGT00940000155059 #12 ENSGT00940000154502 #13 ENSGT00940000153141.B.a #14 ENSGT00520000055567.a.a.b #15 ENSGT00950000183056.B.b ENSGT00940000160216 #16 ENSGT00950000183149.A #17 ENSGT00940000163618 #18 ENSGT00940000156731 #19 ENSGT00390000001029 #20 ENSGT00940000159246 #21 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##22 ENSGT00390000003248.a.b.b ##22 ENSGT00390000003248.a.a.a.b.cb.b.b #22 ENSGT00940000158011 #23 ENSGT00390000018056 #24 ENSGT00390000011782 #25 ENSGT01070000253766.A.b #26 ENSGT00940000154242.b #27 ENSGT00940000156694 ENSGT00390000009040 #28 ENSGT00940000154185.cb ##29 ENSGT00940000155121 #30 ENSGT00940000159123 #31 ENSGT00390000003289 #32 ENSGT00940000157341 #33 ENSGT00940000161936 ENSGT00390000015871.v #35 ENSGT00940000159969.a #36 Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00940000158863 ENSGT00940000159497 ENSGT00940000155059 #12 ENSGT00940000154502 #13 ENSGT00940000153141.B.a #14 ENSGT00520000055567.a.a.b #15 ENSGT00950000183056.B.b ENSGT00940000160216 #16 ENSGT00950000183149.A #17 ENSGT00940000163618 #18 ENSGT00940000156731 #19 ENSGT00390000001029 #20 ENSGT00940000159246 #21 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##22 ENSGT00390000003248.a.a.a.b.cb.b.b #22 ENSGT00940000158011 #23 ENSGT00390000018056 #24 ENSGT00390000011782 #25 ENSGT01070000253766.A.b #26 ENSGT00940000154242.b #27 ENSGT00940000156694 ENSGT00390000009040 #28 ENSGT00940000154185.cb ##29 ENSGT00940000155121 #30 ENSGT00940000159123 #31 ENSGT00390000003289 #32 ENSGT00940000157341 #33 ENSGT00940000161936 ENSGT00390000015871.v #35 ENSGT00940000159969.a #36 Hystricomorpha_b ANCESTRAL SPECIES 27 ENSGT00940000155059 #12 ENSGT00940000154502 #13 ENSGT00940000153141.B.a #14 ENSGT00520000055567.a.a.b #15 ENSGT00940000160216 #16 ENSGT00950000183149.A #17 ENSGT00940000163618 #18 ENSGT00940000156731 #19 ENSGT00390000001029 #20 ENSGT00940000159246 #21 ENSGT00390000003248.a.a.a.b.cb.b.b #22 ENSGT00940000158011 #23 ENSGT00390000018056 #24 ENSGT00390000011782 #25 ENSGT01070000253766.A.b #26 ENSGT00940000154242.b #27 ENSGT00390000009040 #28 ENSGT00940000154185.bb.a #29 ENSGT00940000155121 #30 ENSGT00940000159123 #31 ENSGT00390000003289 #32 ENSGT00940000157341 #33 ENSGT00940000161936 ENSGT00390000015871.v #35 ENSGT00940000159969.a #36 ENSGT00940000159905 #37 Long-tailed chinchilla MODERN SPECIES 161 NSMAF (ENSCLAG00000013661) #12 SDCBP (ENSCLAG00000013259) #13 CYP7A1 (ENSCLAG00000012771) #14 UBXN2B (ENSCLAG00000011369) #15 ENSCLAG00000010131 #16 PENK (ENSCLAG00000017733) #17 ENSCLAG00000009495 #18 SDR16C5 (ENSCLAG00000012258) #19 CHCHD7 (ENSCLAG00000009729) #20 PLAG1 (ENSCLAG00000013839) #21 RPS20 (ENSCLAG00000015938) #22 LYN (ENSCLAG00000010085) #23 TGS1 (ENSCLAG00000009468) #24 TMEM68 (ENSCLAG00000009473) #25 XKR4 (ENSCLAG00000010575) #26 ENSCLAG00000011553 #27 MRPL15 (ENSCLAG00000010064) #28 ENSCLAG00000014943 #29 TCEA1 (ENSCLAG00000013516) #30 ENSCLAG00000016009 #31 ATP6V1H (ENSCLAG00000009337) #32 OPRK1 (ENSCLAG00000009850) #33 ENSCLAG00000009340 #34 RB1CC1 (ENSCLAG00000009807) #35 ENSCLAG00000014346 #36 ST18 (ENSCLAG00000011202) #37 Rodentia_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Myomorpha ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Lesser Egyptian jerboa MODERN SPECIES 51 Chd7 (ENSJJAG00000022064) Rab2a (ENSJJAG00000000676) Car8 (ENSJJAG00000000356) Tox (ENSJJAG00000023957) Nsmaf (ENSJJAG00000018732) #12 Sdcbp (ENSJJAG00000008505) #13 Cyp7a1 (ENSJJAG00000009993) #14 Ubxn2b (ENSJJAG00000017241) #15 Fam110b (ENSJJAG00000011482) Bpnt2 (ENSJJAG00000016357) #16 Penk (ENSJJAG00000012141) #17 Sdr16c6 (ENSJJAG00000005653) #18 Sdr16c5 (ENSJJAG00000012889) #19 Chchd7 (ENSJJAG00000004951) #20 Plag1 (ENSJJAG00000008706) #21 ENSJJAG00000000512 #22 Lyn (ENSJJAG00000014669) #23 Tgs1 (ENSJJAG00000016239) #24 Tmem68 (ENSJJAG00000009727) #25 ENSJJAG00000003859 Xkr4 (ENSJJAG00000013870) #26 ENSJJAG00000015642 #27 ENSJJAG00000012132 Sox17 (ENSJJAG00000021381) Mrpl15 (ENSJJAG00000016599) #28 ENSJJAG00000019339 #29 Tcea1 (ENSJJAG00000020282) #30 Rgs20 (ENSJJAG00000004359) #31 Atp6v1h (ENSJJAG00000018257) #32 Oprk1 (ENSJJAG00000019887) #33 ENSJJAG00000011904 Muroidea ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Cricetidae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Prairie vole MODERN SPECIES 356 Spata4 (ENSMOCG00000003714) Asb5 (ENSMOCG00000022930) Spcs3 (ENSMOCG00000022872) Vegfc (ENSMOCG00000021548) ENSMOCG00000007262 ENSMOCG00000018728 Aga (ENSMOCG00000014844) Tenm3 (ENSMOCG00000020342) Dctd (ENSMOCG00000015038) ENSMOCG00000005387 ENSMOCG00000003820 Cldn22 (ENSMOCG00000006954) ENSMOCG00000008252 Cdkn2aip (ENSMOCG00000016713) Ing2 (ENSMOCG00000005078) ENSMOCG00000004967 #22 Rwdd4a (ENSMOCG00000002163) Trappc11 (ENSMOCG00000015798) Stox2 (ENSMOCG00000006233) Enpp6 (ENSMOCG00000021517) Irf2 (ENSMOCG00000013068) Casp3 (ENSMOCG00000011756) Primpol (ENSMOCG00000006815) Cenpu (ENSMOCG00000004846) Acsl1 (ENSMOCG00000008489) Helt (ENSMOCG00000012330) ENSMOCG00000009524 Cfap97 (ENSMOCG00000005943) Snx25 (ENSMOCG00000012866) Lrp2bp (ENSMOCG00000014647) Ankrd37 (ENSMOCG00000011842) Murinae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.b #22 Rat MODERN SPECIES 18 Htr1b (ENSRNOG00000013042) Mei4 (ENSRNOG00000023794) Irak1bp1 (ENSRNOG00000008984) Phip (ENSRNOG00000008652) Hmgn3 (ENSRNOG00000031032) Lca5 (ENSRNOG00000009580) Sh3bgrl2 (ENSRNOG00000009613) Sh3bgrl2 (ENSRNOG00000068670) ENSRNOG00000066197 Elovl4 (ENSRNOG00000009773) Ttk (ENSRNOG00000029055) Bckdhb (ENSRNOG00000009928) RGD1560917 (ENSRNOG00000034128) Tent5a (ENSRNOG00000010240) Ibtk (ENSRNOG00000027728) LOC100359563 (ENSRNOG00000029843) #22 Tpbg (ENSRNOG00000010694) Ube3d (ENSRNOG00000010802) Dop1a (ENSRNOG00000022847) Pgm3 (ENSRNOG00000009515) Rwdd2a (ENSRNOG00000009599) Me1 (ENSRNOG00000009715) Prss35 (ENSRNOG00000025184) Snap91 (ENSRNOG00000023861) Ripply2 (ENSRNOG00000010004) Cyb5r4 (ENSRNOG00000010024) Mrap2 (ENSRNOG00000010545) Cep162 (ENSRNOG00000010608) Tbx18 (ENSRNOG00000010685) Gabarapl2 (ENSRNOG00000051416) Nt5e (ENSRNOG00000011071) Rodentia ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a ##22 Myomorpha ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a ##22 Muroidea ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a ##22 Murinae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.b.a ##22 Rat MODERN SPECIES 15 Reck (ENSRNOG00000014863) Or13c7 (ENSRNOG00000068857) Or13c7c (ENSRNOG00000070597) Or13c7b (ENSRNOG00000063480) Or13c7e (ENSRNOG00000065792) Or13c7d (ENSRNOG00000062897) ENSRNOG00000070391 Hrct1 (ENSRNOG00000039336) Or13j1 (ENSRNOG00000066545) Or13e8 (ENSRNOG00000015652) Tmem8b (ENSRNOG00000015664) Fam221b (ENSRNOG00000025453) Hint2 (ENSRNOG00000015866) Spag8 (ENSRNOG00000032539) Npr2 (ENSRNOG00000015991) RGD1562259 (ENSRNOG00000070923) ##22 Msmp (ENSRNOG00000043023) Rgp1 (ENSRNOG00000016309) Gba2 (ENSRNOG00000016364) Creb3 (ENSRNOG00000016452) Tln1 (ENSRNOG00000016630) Tpm2 (ENSRNOG00000016731) Car9 (ENSRNOG00000017073) Arhgef39 (ENSRNOG00000021433) Ccdc107 (ENSRNOG00000017253) Sit1 (ENSRNOG00000021546) RGD1560723 (ENSRNOG00000063741) Cd72 (ENSRNOG00000017485) Tesk1 (ENSRNOG00000053729) Fam166b (ENSRNOG00000065204) Rusc2 (ENSRNOG00000045843) Rodentia DUPLICATION Rodentia ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a ##22 Myomorpha ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a ##22 Muroidea ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a ##22 Murinae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a ##22 Mus ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a ##22 Mus_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a ##22 Mus_B ANCESTRAL SPECIES 22 ENSGT00940000158863 ENSGT00940000159497 ENSGT00940000155059 #12 ENSGT00940000154502 #13 ENSGT00940000153141.B.a #14 ENSGT00520000055567.a.a.b #15 ENSGT00950000183056.B.b ENSGT00940000160216 #16 ENSGT00940000154383.s.a ENSGT00950000183149.A #17 ENSGT00940000163618 #18 ENSGT00940000156731 #19 ENSGT00390000001029 #20 ENSGT00940000159246 #21 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##22 ENSGT00390000003248.a.a.a.b.db ##22 ENSGT00940000158011 #23 ENSGT00390000018056.f #24 ENSGT00390000011782 #25 Mus_C ANCESTRAL SPECIES 2 ENSGT00940000158863 ENSGT00940000159497 ENSGT00940000155059 #12 ENSGT00940000154502 #13 ENSGT00940000153141.B.a #14 ENSGT00520000055567.a.a.b #15 ENSGT00950000183056.B.b ENSGT00940000160216 #16 ENSGT00940000154383.s.a ENSGT00950000183149.A #17 ENSGT00940000163618 #18 ENSGT00940000156731 #19 ENSGT00390000001029 #20 ENSGT00940000159246 #21 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##22 ENSGT00940000158011 #23 ENSGT00390000018056.f #24 ENSGT00390000011782 #25 Steppe mouse MODERN SPECIES 3083 ENSMSIG00000023749 Cyp7a1 (ENSMSIG00000023757) #14 Ubxn2b (ENSMSIG00000023768) #15 ENSMSIG00000023784 Fam110b (ENSMSIG00000023787) ENSMSIG00000023798 ENSMSIG00000023802 Bpnt2 (ENSMSIG00000023807) #16 ENSMSIG00000023818 Penk (ENSMSIG00000023830) #17 Sdr16c6 (ENSMSIG00000023838) #18 Sdr16c5 (ENSMSIG00000023861) #19 Chchd7 (ENSMSIG00000023876) #20 Plag1 (ENSMSIG00000023923) #21 Mos (ENSMSIG00000023932) ENSMSIG00000023940 ##22 spretus MODERN SPECIES 13 Rab2a (MGP_SPRETEiJ_G0026744) Car8 (MGP_SPRETEiJ_G0026743) Tox (MGP_SPRETEiJ_G0026742) Nsmaf (MGP_SPRETEiJ_G0026741) #12 Sdcbp (MGP_SPRETEiJ_G0026740) #13 Cyp7a1 (MGP_SPRETEiJ_G0026739) #14 Ubxn2b (MGP_SPRETEiJ_G0026738) #15 Fam110b (MGP_SPRETEiJ_G0026737) MGP_SPRETEiJ_G0026736 #16 Penk (MGP_SPRETEiJ_G0026735) #17 Sdr16c6 (MGP_SPRETEiJ_G0026734) #18 Sdr16c5 (MGP_SPRETEiJ_G0026733) #19 Chchd7 (MGP_SPRETEiJ_G0026732) #20 Plag1 (MGP_SPRETEiJ_G0026731) #21 Mos (MGP_SPRETEiJ_G0026730) Rps20 (MGP_SPRETEiJ_G0026729) ##22 Lyn (MGP_SPRETEiJ_G0026728) #23 Tgs1 (MGP_SPRETEiJ_G0026727) #24 MGP_SPRETEiJ_G0026726 #24 MGP_SPRETEiJ_G0026725 Rat MODERN SPECIES 19 RGD1559960 (ENSRNOG00000068175) ENSRNOG00000069656 Sult1c2a (ENSRNOG00000042111) LOC102551938 (ENSRNOG00000067413) LOC120093086 (ENSRNOG00000065530) LOC301165 (ENSRNOG00000046714) Sgo1 (ENSRNOG00000022499) Kat2b (ENSRNOG00000011871) Pp2d1 (ENSRNOG00000004719) Rab5a (ENSRNOG00000057056) LOC103690615 (ENSRNOG00000000124) Efhb (ENSRNOG00000012618) LOC689479 (ENSRNOG00000046576) Kcnh8 (ENSRNOG00000058626) Satb1 (ENSRNOG00000012942) Rps20-ps11 (ENSRNOG00000030345) ##22 Tbc1d5 (ENSRNOG00000010637) Plcl2 (ENSRNOG00000013368) ENSRNOG00000064269 LOC120094619 (ENSRNOG00000063528) AABR07066416.2 (ENSRNOG00000046104) ENSRNOG00000070668 LOC120093071 (ENSRNOG00000049503) ENSRNOG00000070131 LOC120094615 (ENSRNOG00000068213) LOC120094611 (ENSRNOG00000066837) LOC108351878 (ENSRNOG00000062425) LOC100360856 (ENSRNOG00000047581) LOC120094612 (ENSRNOG00000064783) LOC120094606 (ENSRNOG00000067046) ENSRNOG00000066561 Cricetidae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a ##22 Cricetidae_B ANCESTRAL SPECIES 50 ENSGT00940000158863 ENSGT00940000159497 ENSGT00940000155059 #12 ENSGT00940000154502 #13 ENSGT00940000153141.B.a #14 ENSGT00520000055567.a.a.b #15 ENSGT00950000183056.B.b ENSGT00940000160216 #16 ENSGT00940000154383.s.a ENSGT00950000183149.A #17 ENSGT00940000163618 #18 ENSGT00940000156731 #19 ENSGT00390000001029 #20 ENSGT00940000159246 #21 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##22 ENSGT00390000003248.a.a.a.b.db.d ##22 ENSGT00940000158011 #23 ENSGT00390000018056 #24 ENSGT00390000011782 #25 ENSGT01070000253766.A.b #26 ENSGT00940000154242.b #27 ENSGT00940000156694 ENSGT00390000009040 #28 ENSGT00940000154185 #29 ENSGT00940000155121 #30 ENSGT00940000159123 #31 ENSGT00390000003289 #32 ENSGT00940000157341 #33 ENSGT00940000161936 ENSGT00390000015871 #35 Northern American deer mouse MODERN SPECIES 11 Car8 (ENSPEMG00000019908) Tox (ENSPEMG00000019966) Nsmaf (ENSPEMG00000019696) #12 Sdcbp (ENSPEMG00000020043) #13 Cyp7a1 (ENSPEMG00000019921) #14 Ubxn2b (ENSPEMG00000028233) #15 Fam110b (ENSPEMG00000028969) Bpnt2 (ENSPEMG00000000461) #16 ENSPEMG00000015262 Penk (ENSPEMG00000016794) #17 Sdr16c6 (ENSPEMG00000023129) #18 Sdr16c5 (ENSPEMG00000021917) #19 ENSPEMG00000023256 Plag1 (ENSPEMG00000027390) #21 Mos (ENSPEMG00000008516) ENSPEMG00000029829 ##22 Lyn (ENSPEMG00000021545) #23 ENSPEMG00000029859 Tgs1 (ENSPEMG00000007957) #24 Tmem68 (ENSPEMG00000021534) #25 ENSPEMG00000030336 #29 Xkr4 (ENSPEMG00000021985) #26 Rp1 (ENSPEMG00000013397) #27 ENSPEMG00000014386 ENSPEMG00000026817 Sox17 (ENSPEMG00000030488) Mrpl15 (ENSPEMG00000000583) #28 ENSPEMG00000027695 ENSPEMG00000014138 #29 Tcea1 (ENSPEMG00000023948) #30 Rgs20 (ENSPEMG00000009893) #31 Rodentia_A ANCESTRAL SPECIES 18 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 ENSGT00940000155059 #12 ENSGT00940000154502 #13 ENSGT00940000153141.B.a #14 ENSGT00520000055567.a.a.b #15 ENSGT00950000183056.B.b ENSGT00940000160216 #16 ENSGT00950000183149.A #17 ENSGT00940000163618 #18 ENSGT00940000156731 #19 ENSGT00390000001029 #20 ENSGT00940000159246 #21 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##22 ENSGT00940000158011 #23 ENSGT00390000018056 #24 ENSGT00390000011782 #25 ENSGT01070000253766.A.b #26 ENSGT00940000154242.b #27 ENSGT00940000156694 ENSGT00390000009040 #28 ENSGT00940000154185 #29 ENSGT00940000155121 #30 ENSGT00940000159123 #31 ENSGT00390000003289 #32 ENSGT00940000157341 #33 ENSGT00940000161936 ENSGT00390000015871 #35 ENSGT00940000159969.a #36 Sciuridae ANCESTRAL SPECIES 17 ENSGT00940000158863 ENSGT00940000159497 ENSGT00940000155059 #12 ENSGT00940000154502 #13 ENSGT00940000153141.B.a #14 ENSGT00520000055567.a.a.b #15 ENSGT00950000183056.B.b ENSGT00940000160216 #16 ENSGT00950000183149.A #17 ENSGT00940000163618 #18 ENSGT00940000156731 #19 ENSGT00390000001029 #20 ENSGT00940000159246 #21 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.db ##22 ENSGT00390000003248.a.a.a.b.cb.a.a ##22 ENSGT00940000158011 #23 ENSGT00390000018056 #24 ENSGT00390000011782 #25 ENSGT01070000253766.A.b #26 ENSGT00940000154242.b #27 ENSGT00940000156694 ENSGT00390000009040 #28 ENSGT00940000154185 #29 ENSGT00940000155121 #30 ENSGT00940000159123 #31 ENSGT00390000003289 #32 ENSGT00940000157341 #33 ENSGT00940000161936 ENSGT00390000015871 #35 ENSGT00940000159969.a #36 Eurasian red squirrel MODERN SPECIES CA8 (ENSSVLG00005012006) TOX (ENSSVLG00005011958) NSMAF (ENSSVLG00005011910) #12 SDCBP (ENSSVLG00005011445) #13 CYP7A1 (ENSSVLG00005011337) #14 UBXN2B (ENSSVLG00005011261) #15 FAM110B (ENSSVLG00005011236) BPNT2 (ENSSVLG00005011167) #16 PENK (ENSSVLG00005011127) #17 ENSSVLG00005010971 #18 SDR16C5 (ENSSVLG00005010895) #19 ENSSVLG00005010860 CHCHD7 (ENSSVLG00005010790) #20 PLAG1 (ENSSVLG00005010731) #21 MOS (ENSSVLG00005010710) RPS20 (ENSSVLG00005010588) ##22 LYN (ENSSVLG00005010475) #23 TGS1 (ENSSVLG00005010446) #24 ENSSVLG00005010412 ENSSVLG00005010285 #25 XKR4 (ENSSVLG00005010234) #26 RP1 (ENSSVLG00005009858) #27 SOX17 (ENSSVLG00005009789) MRPL15 (ENSSVLG00005009764) #28 ENSSVLG00005009666 #29 ENSSVLG00005009646 TCEA1 (ENSSVLG00005009501) #30 RGS20 (ENSSVLG00005009394) #31 ENSSVLG00005009360 ATP6V1H (ENSSVLG00005009299) #32 ENSSVLG00005009270 Marmotini ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a ##22 Marmotini_b ANCESTRAL SPECIES 52 ENSGT00940000157108 ENSGT00940000159307 ENSGT00940000155894 ENSGT00390000005870 ENSGT00940000157544 ENSGT00940000153141.B.a #14 ENSGT00520000055567.a.a.b #15 ENSGT00950000183056.B.b ENSGT00940000160216 #16 ENSGT00950000183149.A #17 ENSGT00940000163618 #18 ENSGT00940000156731 #19 ENSGT00390000001029 #20 ENSGT00940000159246 #21 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##22 ENSGT00940000158011 #23 ENSGT00390000018056 #24 ENSGT00390000011782 #25 ENSGT01070000253766.A.b #26 ENSGT00940000154242.b #27 ENSGT00940000156694 ENSGT00390000009040 #28 ENSGT00940000154185 #29 ENSGT00940000155121 #30 ENSGT00940000159123 #31 ENSGT00390000003289 #32 ENSGT00940000157341 #33 ENSGT00940000161936 ENSGT00390000015871 #35 ENSGT00940000159969.a #36 Arctic ground squirrel MODERN SPECIES 137 RPS20 (ENSUPAG00010002625) ##22 LYN (ENSUPAG00010002635) #23 TMEM68 (ENSUPAG00010002929) #25 XKR4 (ENSUPAG00010002936) #26 RP1 (ENSUPAG00010002942) #27 ENSUPAG00010002961 SOX17 (ENSUPAG00010002964) MRPL15 (ENSUPAG00010002973) #28 LYPLA1 (ENSUPAG00010002986) #29 TCEA1 (ENSUPAG00010003008) #30 ENSUPAG00010003023 RGS20 (ENSUPAG00010003027) #31 ATP6V1H (ENSUPAG00010003037) #32 OPRK1 (ENSUPAG00010003107) #33 ENSUPAG00010003124 NPBWR1 (ENSUPAG00010003128) Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 ENSGT00940000155059 #12 ENSGT00940000154502 #13 ENSGT00940000153141.B.a #14 ENSGT00520000055567.a.a.b #15 ENSGT00950000183056.B.b ENSGT00940000160216 #16 ENSGT00950000183149.A #17 ENSGT00940000163618 #18 ENSGT00940000156731 #19 ENSGT00390000001029 #20 ENSGT00940000159246 #21 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##22 ENSGT00390000003248.a.b.b ##22 ENSGT00390000003248.a.a.a.b.cb.b.b #22 ENSGT00940000158011 #23 ENSGT00390000018056 #24 ENSGT00390000011782 #25 ENSGT01070000253766.A.b #26 ENSGT00940000154242.b #27 ENSGT00940000156694 ENSGT00390000009040 #28 ENSGT00940000154185.cb ##29 ENSGT00940000155121 #30 ENSGT00940000159123 #31 ENSGT00390000003289 #32 ENSGT00940000157341 #33 ENSGT00940000161936 Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00940000153886.a.b.f ENSGT00940000158863 ENSGT00940000159497 ENSGT00940000155059 #12 ENSGT00940000154502 #13 ENSGT00940000153141.B.a #14 ENSGT00520000055567.a.a.b #15 ENSGT00950000183056.B.b ENSGT00940000160216 #16 ENSGT00950000183149.A #17 ENSGT00940000163618 #18 ENSGT00940000156731 #19 ENSGT00390000001029 #20 ENSGT00940000159246 #21 ENSGT00940000160233 ENSGT00390000003248.a.a.a.b.cb.a.a ##22 ENSGT00390000003248.a.a.a.b.cb.b.b #22 ENSGT00940000158011 #23 ENSGT00390000018056 #24 ENSGT00390000011782 #25 ENSGT01070000253766.A.b #26 ENSGT00940000154242.b #27 ENSGT00940000156694 ENSGT00390000009040 #28 ENSGT00940000154185.cb ##29 ENSGT00940000155121 #30 ENSGT00940000159123 #31 ENSGT00390000003289 #32 ENSGT00940000157341 #33 ENSGT00940000161936 ENSGT00390000015871.v #35 Guinea pig MODERN SPECIES 64 FAM110B (ENSCPOG00000033617) BPNT2 (ENSCPOG00000023705) #16 PENK (ENSCPOG00000031786) #17 ENSCPOG00000020018 #18 SDR16C5 (ENSCPOG00000000571) #19 CHCHD7 (ENSCPOG00000030280) #20 PLAG1 (ENSCPOG00000039131) #21 MOS (ENSCPOG00000020476) ENSCPOG00000011697 ##22 ENSCPOG00000030320 LYN (ENSCPOG00000011693) #23 TGS1 (ENSCPOG00000009713) #24 TMEM68 (ENSCPOG00000019826) #25 XKR4 (ENSCPOG00000003676) #26 ENSCPOG00000039324 #27 SOX17 (ENSCPOG00000000892) MRPL15 (ENSCPOG00000035946) #28 LYPLA1 (ENSCPOG00000022715) ##29 TCEA1 (ENSCPOG00000005886) #30 ENSCPOG00000038533 #31 ENSCPOG00000022816 ATP6V1H (ENSCPOG00000012174) #32 ENSCPOG00000023180 OPRK1 (ENSCPOG00000006607) #33 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.a ##22 Degu MODERN SPECIES 126 ENSODEG00000019073 ##22 ENSODEG00000004554 ENSODEG00000005181 HMMR (ENSODEG00000004387) ENSODEG00000004867 ENSODEG00000005448 TENM2 (ENSODEG00000005069) WWC1 (ENSODEG00000004850) RARS1 (ENSODEG00000005980) ENSODEG00000005759 FBLL1 (ENSODEG00000019199) PANK3 (ENSODEG00000005503) SLIT3 (ENSODEG00000005145) ENSODEG00000006240 INSYN2B (ENSODEG00000006097) DOCK2 (ENSODEG00000004282) Rodentia ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b ##22 Myomorpha ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b ##22 Muroidea ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b ##22 Murinae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b ##22 Rat DUPLICATION Rat MODERN SPECIES 13 ENSRNOG00000067722 Pdcl (ENSRNOG00000008484) Rc3h2 (ENSRNOG00000009196) Zbtb6 (ENSRNOG00000009340) Zbtb26 (ENSRNOG00000009346) Rabgap1 (ENSRNOG00000009402) Gpr21 (ENSRNOG00000042269) Strbp (ENSRNOG00000010150) RGD1561137 (ENSRNOG00000030143) Crb2 (ENSRNOG00000025498) Dennd1a (ENSRNOG00000010526) Lhx2 (ENSRNOG00000010551) Nek6 (ENSRNOG00000010897) Psmb7 (ENSRNOG00000011732) ENSRNOG00000066446 Rps20 (ENSRNOG00000029627) ##22 Nr5a1 (ENSRNOG00000012682) Nr6a1 (ENSRNOG00000013232) Olfml2a (ENSRNOG00000014034) Wdr38 (ENSRNOG00000014102) Rpl35 (ENSRNOG00000014272) Arpc5l (ENSRNOG00000014317) Golga1 (ENSRNOG00000014493) Scai (ENSRNOG00000025278) Ppp6c (ENSRNOG00000015145) AABR07051831.1 (ENSRNOG00000015854) LOC100362366 (ENSRNOG00000028690) Lrp1b (ENSRNOG00000030243) Kynu (ENSRNOG00000029993) Arhgap15 (ENSRNOG00000031168) Gtdc1 (ENSRNOG00000031038) Rat MODERN SPECIES 15 Cyp7a1 (ENSRNOG00000009488) #14 Ubxn2b (ENSRNOG00000071045) #15 ENSRNOG00000063053 Fam110b (ENSRNOG00000009114) ENSRNOG00000069204 Bpnt2 (ENSRNOG00000046647) #16 RGD1563405 (ENSRNOG00000069142) Penk (ENSRNOG00000008943) #17 Sdr16c6 (ENSRNOG00000067216) #18 Sdr16c6 (ENSRNOG00000040151) #18 Sdr16c5 (ENSRNOG00000008871) #19 Chchd7 (ENSRNOG00000031769) Plag1 (ENSRNOG00000008846) #21 LOC100364265 (ENSRNOG00000012088) Mos (ENSRNOG00000008567) Rps20-ps10 (ENSRNOG00000008555) ##22 Lyn (ENSRNOG00000008180) #23 Tgs1 (ENSRNOG00000008156) #24 Tmem68 (ENSRNOG00000008872) #25 Xkr4 (ENSRNOG00000027276) #26 Cyld-ps1 (ENSRNOG00000008861) Rp1 (ENSRNOG00000008807) #27 ENSRNOG00000065942 Sumo4 (ENSRNOG00000069967) Sox17 (ENSRNOG00000027357) Mrpl15 (ENSRNOG00000008566) #28 Lypla1 (ENSRNOG00000008320) #29 Tcea1 (ENSRNOG00000022323) #30 Rgs20 (ENSRNOG00000008100) #31 Atp6v1h (ENSRNOG00000030862) #32 Oprk1 (ENSRNOG00000007647) #33 Cricetidae ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000003248.a.a.a.b.cb.a.b ##22 Northern American deer mouse MODERN SPECIES 10 Tmx3 (ENSPEMG00000011968) ENSPEMG00000030219 Dok6 (ENSPEMG00000019316) Cd226 (ENSPEMG00000029583) Rttn (ENSPEMG00000019864) ENSPEMG00000027089 Socs6 (ENSPEMG00000009086) ENSPEMG00000009228 ##15 ENSPEMG00000004621 ENSPEMG00000028176 Cbln2 (ENSPEMG00000024653) Neto1 (ENSPEMG00000021247) ENSPEMG00000026675 ENSPEMG00000030444 ##22 Fbxo15 (ENSPEMG00000003160) Timm21 (ENSPEMG00000024475) Cyb5a (ENSPEMG00000020270) Gm17266 (ENSPEMG00000031219) Dipk1c (ENSPEMG00000019790) Cndp2 (ENSPEMG00000020038) Cndp1 (ENSPEMG00000017304) Zfp407 (ENSPEMG00000019754) Zadh2 (ENSPEMG00000028418) Tshz1 (ENSPEMG00000022838) Zfp516 (ENSPEMG00000024000) ENSPEMG00000024427 Zfp236 (ENSPEMG00000026320) Mbp (ENSPEMG00000021451) Galr1 (ENSPEMG00000022914)