Pomacentridae	ANCESTRAL SPECIES	79								ENSGT00950000183149.C.a #13	ENSGT00940000159082 #14	ENSGT00390000016068 #15	ENSGT00390000015400 #16	ENSGT00940000155645.i.b #17	ENSGT00940000154146.b.a.m.b ##18	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #30	ENSGT00390000001424.wb.b #31	ENSGT00390000000860.a #32	ENSGT00940000156052.k.a #33	ENSGT00940000158358.b #34	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Pomacentridae_A	ANCESTRAL SPECIES	78								ENSGT00950000183149.C.a #13	ENSGT00940000159082 #14	ENSGT00390000016068 #15	ENSGT00390000015400 #16	ENSGT00940000155645.i.b #17	ENSGT00940000154146.b.a.m.b ##18	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #30	ENSGT00390000001424.wb.b #31	ENSGT00390000000860.a #32	ENSGT00940000156052.k.a #33	ENSGT00940000158358.b #34	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Amphiprion	ANCESTRAL SPECIES	111	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT01080000257344.a.b.b.b.b.b.b.a.a.b.a.a.a ##10	ENSGT01030000234589.g.a.e.a.c.a #9	ENSGT01080000257344.a.b.b.b.b.b.b.a.a.b.b.a #10	ENSGT01030000234589.g.a.e.a.c.b #11	ENSGT00950000183149.C.a #13	ENSGT00940000159082 #14	ENSGT00390000016068 #15	ENSGT00390000015400 #16	ENSGT00940000155645.i.b #17	ENSGT00940000154146.b.a.m.b ##18	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #30	ENSGT00390000001424.wb.b #31	ENSGT00390000000860.a #32	ENSGT00940000156052.k.a #33	ENSGT00940000158358.b #34	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b	ENSGT00940000157431.c.b
Clown anemonefish	MODERN SPECIES	3229			ENSAOCG00000013921 #9	ENSAOCG00000013944 #10	ENSAOCG00000013974 #11	ENSAOCG00000013993 #12	ENSAOCG00000014018 #13	PDPR (ENSAOCG00000000909) #14	mrps11 (ENSAOCG00000000916) #15	mrpl46 (ENSAOCG00000014108) #16	NTRK3 (ENSAOCG00000014175) #17	ENSAOCG00000014223 #18	ENSAOCG00000014234 #19	ENSAOCG00000014263 #20	sv2ba (ENSAOCG00000014489) #21	mespba (ENSAOCG00000014528) #22	mespaa (ENSAOCG00000014575) #23	ANPEP (ENSAOCG00000014657) #24	ANPEP (ENSAOCG00000014707) #25	ap3s2 (ENSAOCG00000014732) #26	igf1rb (ENSAOCG00000014811) #27	LRRC28 (ENSAOCG00000014863) #28	ENSAOCG00000014881 #29	SNAP25 (ENSAOCG00000001031) #30	ENSAOCG00000014924 #31	fam219b (ENSAOCG00000001040) #32	ENSAOCG00000001819 #33	ENSAOCG00000001047 #34	ENSAOCG00000015025 #35	cct6a (ENSAOCG00000015067) #36	ENSAOCG00000015123 #37
Orange clownfish	MODERN SPECIES		si:ch211-260e23.9 (ENSAPEG00000006291)	si:ch211-260e23.8 (ENSAPEG00000006308)	ENSAPEG00000006320 ##10	ENSAPEG00000006333 #9	ENSAPEG00000006377 ##10	ENSAPEG00000006403 #11	ENSAPEG00000006448 ##10	ENSAPEG00000006468 #13	PDPR (ENSAPEG00000006486) #14	mrps11 (ENSAPEG00000006598) #15	mrpl46 (ENSAPEG00000006612) #16	NTRK3 (ENSAPEG00000006663) #17	ENSAPEG00000006740 ##18	ENSAPEG00000006914 #20	sv2ba (ENSAPEG00000006939) #21	mespba (ENSAPEG00000006955) #22	mespaa (ENSAPEG00000006989) #23	ANPEP (ENSAPEG00000007047) #24	ENSAPEG00000007158	ANPEP (ENSAPEG00000007197) #25	ap3s2 (ENSAPEG00000007481) #26	igf1rb (ENSAPEG00000007516) #27	LRRC28 (ENSAPEG00000007582) #28	SNAP25 (ENSAPEG00000007644) #30	ENSAPEG00000007680 #31	fam219b (ENSAPEG00000007693) #32	ENSAPEG00000007734 #33	ENSAPEG00000007760 #34	ENSAPEG00000007782	cyp1a (ENSAPEG00000007811)	edc3 (ENSAPEG00000007841)
Spiny chromis	MODERN SPECIES	866											ENSAPOG00000004994 ##18	ENSAPOG00000005007 ##18	ENSAPOG00000005015 ##18	ENSAPOG00000005037 #20	sv2ba (ENSAPOG00000005314) #21	mespba (ENSAPOG00000005378) #22	mespaa (ENSAPOG00000005398) #23	ANPEP (ENSAPOG00000005421) #24	ANPEP (ENSAPOG00000005536) #25	ap3s2 (ENSAPOG00000005579) #26	igf1rb (ENSAPOG00000005700) #27	ENSAPOG00000005721 #28
Bicolor damselfish	MODERN SPECIES	613											ENSSPAG00000006865 #17	ENSSPAG00000006882 #20	ENSSPAG00000006914 #20	ENSSPAG00000006928 #20	sv2ba (ENSSPAG00000006939) #21	mespba (ENSSPAG00000006971) #22	mespaa (ENSSPAG00000006988) #23	ANPEP (ENSSPAG00000007005) #24	ANPEP (ENSSPAG00000007043) #25	ap3s2 (ENSSPAG00000007064) #26	igf1rb (ENSSPAG00000007089) #27	LRRC28 (ENSSPAG00000007126) #28