Actinopterygii	ANCESTRAL SPECIES	122	ENSGT00390000016718	ENSGT00950000182844.b.b.b	ENSGT00390000000453	ENSGT00390000005855	ENSGT00940000159749	ENSGT00940000177011	ENSGT00390000005224	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645 #19	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.a ##20	ENSGT00950000182940.b.a.a #21	ENSGT00530000064251	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.b ##25	ENSGT00390000013269	ENSGT00970000193421.C.b #26	ENSGT00940000154876.a.a #25
Neopterygii	ANCESTRAL SPECIES	30						ENSGT00940000159749	ENSGT00940000177011	ENSGT00390000005224	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645 #19	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.b ##25	ENSGT00970000193421.C.b #26	ENSGT00390000013269	ENSGT00530000064251	ENSGT00510000048902.b	ENSGT00940000156682 #27	ENSGT00390000015368.a.b	ENSGT00940000159268	ENSGT00530000063847.a	ENSGT00940000157771 #28	ENSGT00940000156205.h	ENSGT00940000156291	ENSGT00940000157540.A ##36	ENSGT00940000160523
Osteoglossocephalai	ANCESTRAL SPECIES		ENSGT00550000074924	ENSGT00940000156978	ENSGT00940000155581.B	ENSGT00390000003374	ENSGT00940000158707.a.b	ENSGT00520000055637.A.b	ENSGT00940000154158	ENSGT00390000005224	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645 #19	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.a ##21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000154146.b.b.b ##20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT01080000257410.A.f.l #35	ENSGT00390000013269	ENSGT00940000164605	ENSGT00530000064251	ENSGT00510000048902.b	ENSGT00940000156682 #27	ENSGT00390000015368.a.b	ENSGT00940000159268	ENSGT00530000063847.a	ENSGT00940000157771 #28
Clupeocephala	ANCESTRAL SPECIES	2	ENSGT00390000004913	ENSGT00550000074924	ENSGT00940000156978	ENSGT00940000155581.B	ENSGT00390000003374	ENSGT00940000158707.a.b	ENSGT00520000055637.A.b	ENSGT00940000154158	ENSGT00390000005224	ENSGT00940000155645.j ##19	ENSGT00940000155645.i.a ##19	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.b.b.b ##20	ENSGT00950000182940.b.a.a.g.a ##21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000170837	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00940000167440	ENSGT00390000009663	ENSGT00940000165046.a	ENSGT00940000161379	ENSGT00990000204217
Euteleosteomorpha	ANCESTRAL SPECIES	3	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000156519.o	ENSGT00940000158316	ENSGT00950000182971.A	ENSGT00390000015893	ENSGT00390000015857	ENSGT00940000157600	ENSGT00390000011262.e.b	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00940000156205.g	ENSGT00940000156291.e	ENSGT00940000157540.B #36	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a #9	ENSGT00390000009995	ENSGT00940000154870.D.a.b	ENSGT00940000161170.c	ENSGT00390000012547.a.f.a
Acanthomorphata	ANCESTRAL SPECIES	216										ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00940000156205.g	ENSGT00940000156291.e	ENSGT00940000157540.B #36	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9
Euacanthomorphacea	ANCESTRAL SPECIES	29										ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Percomorphaceae	ANCESTRAL SPECIES	27				ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00940000157540.B #36	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00940000163460.a.a.b	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00940000163460.a.a.b	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Anabantaria	ANCESTRAL SPECIES	11	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00940000163460.a.a.b	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Zig-zag eel	MODERN SPECIES	17	ENSMAMG00000005534 #7	ENSMAMG00000005558 #8	ENSMAMG00000005574 #9	ENSMAMG00000006063 #10	ENSMAMG00000006099 #11	ENSMAMG00000006272 #12	hmbox1a (ENSMAMG00000006331) #13	ENSMAMG00000006376 #14	ENSMAMG00000006518 #15	ENSMAMG00000006529 #16	mrps11 (ENSMAMG00000006581) #17	mrpl46 (ENSMAMG00000006593) #18	NTRK3 (ENSMAMG00000006607) #19	ENSMAMG00000006728 #20	sv2ba (ENSMAMG00000006746) #21	mespba (ENSMAMG00000024292) #22	mespaa (ENSMAMG00000006779) #23	ENSMAMG00000006797 #24	ENSMAMG00000006815 #25	ENSMAMG00000028682 #26	igf1rb (ENSMAMG00000006856) #27	ENSMAMG00000006912 #28	ENSMAMG00000006952 #29	ENSMAMG00000028118 #30	ENSMAMG00000025788 #31	ENSMAMG00000026945 #32	ENSMAMG00000028057 #33	ENSMAMG00000025521 #34	ENSMAMG00000008190 #35	ENSMAMG00000008221 #36	ENSMAMG00000025751 #37
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00940000163460.a.a.b	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Climbing perch	MODERN SPECIES	16	ENSATEG00000006753 #36	ENSATEG00000006661 #9	ENSATEG00000027840	ENSATEG00000006651 #10	ENSATEG00000006493 #11	ENSATEG00000006461 #12	hmbox1a (ENSATEG00000006405) #13	ENSATEG00000005800 #14	ENSATEG00000005788 #15	ENSATEG00000005675 #16	mrps11 (ENSATEG00000005662) #17	mrpl46 (ENSATEG00000005654) #18	NTRK3 (ENSATEG00000005562) #19	ENSATEG00000005542 #20	sv2ba (ENSATEG00000005250) #21	mespba (ENSATEG00000005218) #22	ENSATEG00000005199 #23	ENSATEG00000004967 #24	ENSATEG00000004490 #25	ENSATEG00000004445 #26	ENSATEG00000004408 #27	ENSATEG00000004356 #28	ENSATEG00000025281 #29	ENSATEG00000004299 #30	ENSATEG00000004284 #8	ENSATEG00000004272 #7	ENSATEG00000004264	ENSATEG00000004224	CYP1A2 (ENSATEG00000004218)	ENSATEG00000004205	CSK (ENSATEG00000004157)
Siamese fighting fish	MODERN SPECIES	14	ENSBSLG00000017570	ENSBSLG00000017585	ENSBSLG00000017602	GLO1 (ENSBSLG00000017626) #10	eprs1 (ENSBSLG00000017848) #11	TDP1 (ENSBSLG00000020645) #12	hmbox1a (ENSBSLG00000021005) #13	KIF13B (ENSBSLG00000021233) #14	ENSBSLG00000021694 #15	PDPR (ENSBSLG00000021728) #16	mrps11 (ENSBSLG00000021862) #17	mrpl46 (ENSBSLG00000021874) #18	NTRK3 (ENSBSLG00000021924) #19	ENSBSLG00000022468 #20	sv2ba (ENSBSLG00000022546) #21	mespba (ENSBSLG00000022631) #22	mespaa (ENSBSLG00000022636) #23	ANPEP (ENSBSLG00000022639) #24	ANPEP (ENSBSLG00000022664) #25	ap3s2 (ENSBSLG00000022766) #26	igf1rb (ENSBSLG00000023039) #27	LRRC28 (ENSBSLG00000024772) #28	SNAP25 (ENSBSLG00000024781) #29	cox5aa (ENSBSLG00000024788) #30	fam219b (ENSBSLG00000024793) #8	ENSBSLG00000024794 #7	gnrhr2 (ENSBSLG00000024798) #9	SLCO3A1 (ENSBSLG00000024809) #35	ENSBSLG00000024867 #36	ENSBSLG00000024895	ENSBSLG00000024956
Carangaria	ANCESTRAL SPECIES	11	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00940000163460.a.a.b	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Carangaria_A	ANCESTRAL SPECIES	20	ENSGT00940000163716.d.b #34	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00940000163460.a.a.b	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Seriola	ANCESTRAL SPECIES	13	ENSGT01080000257410.A.f.l #35	ENSGT00940000163716.d.b #34	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Greater amberjack	MODERN SPECIES	1	ENSSDUG00000009909 #34	ENSSDUG00000009060 #9	GLO1 (ENSSDUG00000008983) #10	eprs1 (ENSSDUG00000008910) #11	TDP1 (ENSSDUG00000008869) #12	hmbox1a (ENSSDUG00000008816) #13	KIF13B (ENSSDUG00000008546) #14	ENSSDUG00000008514 #15	PDPR (ENSSDUG00000008482) #16	mrps11 (ENSSDUG00000008450) #17	mrpl46 (ENSSDUG00000008387) #18	NTRK3 (ENSSDUG00000008337) #19	ENSSDUG00000008310 #20	ENSSDUG00000008270 #20	sv2ba (ENSSDUG00000008252) #21	mespba (ENSSDUG00000008248) #22	mespaa (ENSSDUG00000008233) #23	ANPEP (ENSSDUG00000008046) #24	ANPEP (ENSSDUG00000008006) #25	ap3s2 (ENSSDUG00000007981) #26	IGF1R (ENSSDUG00000007895) #27	LRRC28 (ENSSDUG00000007831) #28	SNAP25 (ENSSDUG00000007809) #29	COX5A (ENSSDUG00000007791) #30	fam219b (ENSSDUG00000007775) #8	ENSSDUG00000007759 #7	ENSSDUG00000007745	ENSSDUG00000007724	ENSSDUG00000007715	cyp1a (ENSSDUG00000007695)	edc3 (ENSSDUG00000007671)
Yellowtail amberjack	MODERN SPECIES	3186	ENSSLDG00000015077	GLO1 (ENSSLDG00000015086) #10	eprs1 (ENSSLDG00000015153) #11	TDP1 (ENSSLDG00000015413) #12	hmbox1a (ENSSLDG00000015485) #13	KIF13B (ENSSLDG00000015535) #14	ENSSLDG00000015579 #15	PDPR (ENSSLDG00000015598) #16	mrps11 (ENSSLDG00000015652) #17	mrpl46 (ENSSLDG00000015671) #18	NTRK3 (ENSSLDG00000015705) #19	ENSSLDG00000015782 #20	ANPEP (ENSSLDG00000015869) #24	ENSSLDG00000016072 #20	sv2ba (ENSSLDG00000016100) #21	mespba (ENSSLDG00000016123) #22	mespaa (ENSSLDG00000016134) #23	ANPEP (ENSSLDG00000016157) #25	ap3s2 (ENSSLDG00000016191) #26	igf1rb (ENSSLDG00000016218) #27	LRRC28 (ENSSLDG00000016277) #28	SNAP25 (ENSSLDG00000016298) #29	COX5A (ENSSLDG00000016326) #30	fam219b (ENSSLDG00000016348) #8	ENSSLDG00000016359 #7	ENSSLDG00000016381	ENSSLDG00000016396	ENSSLDG00000016405	cyp1a (ENSSLDG00000016420)	ENSSLDG00000016431	CSK (ENSSLDG00000016451)
Barramundi perch	MODERN SPECIES	105	ENSLCAG00010027396	ENSLCAG00010027393	ENSLCAG00010027389 #7	fam219b (ENSLCAG00010027388) #8	TDP1 (ENSLCAG00010027374) #12	hmbox1a (ENSLCAG00010027366) #13	KIF13B (ENSLCAG00010027252) #14	ENSLCAG00010027106 #15	PDPR (ENSLCAG00010027089) #16	mrps11 (ENSLCAG00010027082) #17	mrpl46 (ENSLCAG00010027081) #18	NTRK3 (ENSLCAG00010027075) #19	ENSLCAG00010027071 #20	ENSLCAG00010027068 #20	sv2ba (ENSLCAG00010027063) #21	mespba (ENSLCAG00010027060) #22	mespaa (ENSLCAG00010027057) #23	ANPEP (ENSLCAG00010027048) #24	ANPEP (ENSLCAG00010027022) #25	ap3s2 (ENSLCAG00010026999) #26	igf1rb (ENSLCAG00010026927) #27	LRRC28 (ENSLCAG00010026907) #28	SNAP25 (ENSLCAG00010026905) #29	ENSLCAG00010026901 #30	ENSLCAG00010026900	ENSLCAG00010026899	eprs1 (ENSLCAG00010026871) #11	GLO1 (ENSLCAG00010026852) #10	ENSLCAG00010026851	ENSLCAG00010026850 #9	ENSLCAG00010026849 #34
Pleuronectoidei	ANCESTRAL SPECIES	10	ENSGT01080000257410.A.f.l #35	ENSGT00940000163716.d.b #34	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452.h	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Turbot	MODERN SPECIES	17	ENSSMAG00000030437 #31	ENSSMAG00000028375 #34	ENSSMAG00000038051 #9	ENSSMAG00000011426 #10	ENSSMAG00000011150 #11	ENSSMAG00000011140 #12	hmbox1a (ENSSMAG00000011108) #13	ENSSMAG00000011045 #14	ENSSMAG00000026734 #15	ENSSMAG00000010992 #16	mrps11 (ENSSMAG00000010954) #17	mrpl46 (ENSSMAG00000010974) #18	NTRK3 (ENSSMAG00000010859) #19	ENSSMAG00000010778 #20	sv2ba (ENSSMAG00000010684) #21	mespba (ENSSMAG00000026233) #22	ENSSMAG00000010662 #23	ENSSMAG00000010607 #24	ENSSMAG00000010589 #25	ENSSMAG00000010557 #26	ENSSMAG00000010426 #27	ENSSMAG00000010399 #28	ENSSMAG00000010322 #29	ENSSMAG00000010316 #30	ENSSMAG00000036332 #8	ENSSMAG00000010300 #7	ENSSMAG00000010254	ENSSMAG00000010235	ENSSMAG00000010219	CYP1A2 (ENSSMAG00000010200)	ENSSMAG00000010176
Tongue sole	MODERN SPECIES	15	ENSCSEG00000010157 #31	ENSCSEG00000010205	ENSCSEG00000010238	eprs1 (ENSCSEG00000010266) #11	TDP1 (ENSCSEG00000010313) #12	hmbox1a (ENSCSEG00000010331) #13	KIF13B (ENSCSEG00000010552) #14	ENSCSEG00000010588 #15	PDPR (ENSCSEG00000010593) #16	mrps11 (ENSCSEG00000010615) #17	mrpl46 (ENSCSEG00000010621) #18	NTRK3 (ENSCSEG00000010626) #19	ENSCSEG00000010656 ##20	ENSCSEG00000010687 ##20	sv2ba (ENSCSEG00000010699) #21	mespba (ENSCSEG00000010719) #22	mespaa (ENSCSEG00000010740) #23	ANPEP (ENSCSEG00000010761) #25	ap3s2 (ENSCSEG00000010801) #26	igf1rb (ENSCSEG00000010813) #27	LRRC28 (ENSCSEG00000010856) #28	SNAP25 (ENSCSEG00000010877) #29	ENSCSEG00000010895	cox5aa (ENSCSEG00000010910) #30	fam219b (ENSCSEG00000010990) #8	ENSCSEG00000011000 #7	ENSCSEG00000011022	ENSCSEG00000011039	ENSCSEG00000011049	cyp1a (ENSCSEG00000011070)	CSK (ENSCSEG00000011082)
Eupercaria	ANCESTRAL SPECIES	14	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00940000163460.a.a.b	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Tetraodontidae	ANCESTRAL SPECIES	46	ENSGT00940000157540.B #36	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b
Fugu	MODERN SPECIES	4	SLCO3A1 (ENSTRUG00000007682) #35	ENSTRUG00000007534 #9	GLO1 (ENSTRUG00000007411) #10	eprs1 (ENSTRUG00000006901) #11	TDP1 (ENSTRUG00000006521) #12	hmbox1a (ENSTRUG00000006366) #13	KIF13B (ENSTRUG00000005689) #14	ENSTRUG00000005668 #15	PDPR (ENSTRUG00000004703) #16	mrps11 (ENSTRUG00000020346) #17	mrpl46 (ENSTRUG00000023585) #18	NTRK3 (ENSTRUG00000002667) #19	ENSTRUG00000033270	ENSTRUG00000021927 #20	sv2ba (ENSTRUG00000015251) #21	mespba (ENSTRUG00000020616) #22	mespaa (ENSTRUG00000022932) #23	ANPEP (ENSTRUG00000023856) #24	ANPEP (ENSTRUG00000015317) #25	ap3s2 (ENSTRUG00000015431) #26	igf1rb (ENSTRUG00000015459) #27	LRRC28 (ENSTRUG00000015594) #28	SNAP25 (ENSTRUG00000015620) #29	cox5aa (ENSTRUG00000015647) #30	fam219b (ENSTRUG00000022531) #8	ENSTRUG00000024094 #7	ENSTRUG00000024639	ENSTRUG00000024847	THSD4 (ENSTRUG00000028384)	ENSTRUG00000015724	fgf3 (ENSTRUG00000027654)
Tetraodon	MODERN SPECIES	26	TDP1 (ENSTNIG00000011903) #12	hmbox1a (ENSTNIG00000011904) #13	KIF13B (ENSTNIG00000011905) #14	ENSTNIG00000011906 #15	ENSTNIG00000011907 #16	PDPR (ENSTNIG00000011908) #16	mrps11 (ENSTNIG00000011909) #17	mrpl46 (ENSTNIG00000011910) #18	NTRK3 (ENSTNIG00000011911) #19	ENSTNIG00000003131	LHFPL4 (ENSTNIG00000011912)	ENSTNIG00000011913	ENSTNIG00000011914 ##20	ENSTNIG00000011915 ##20	sv2ba (ENSTNIG00000011916) #21	mespba (ENSTNIG00000011917) #22	mespaa (ENSTNIG00000000556) #23	ANPEP (ENSTNIG00000011918) #24	ANPEP (ENSTNIG00000011919) #25	ap3s2 (ENSTNIG00000011920) #26	igf1rb (ENSTNIG00000011921) #27	LRRC28 (ENSTNIG00000011922) #28	SNAP25 (ENSTNIG00000011923) #29	cox5aa (ENSTNIG00000011924) #30	fam219b (ENSTNIG00000011925) #8	ENSTNIG00000016048 #7	ENSTNIG00000001218	larp6a (ENSTNIG00000011926)	tm2d3 (ENSTNIG00000011927)	ENSTNIG00000011928	ulk3 (ENSTNIG00000001896)
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00940000163460.a.a.b	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	1640																ENSLBEG00000009955 #22	ENSLBEG00000009977 #23	ENSLBEG00000010003 #24
Ballan wrasse	MODERN SPECIES	929															sv2ba (ENSLBEG00000006657) #21	ENSLBEG00000006856 #22	ENSLBEG00000006884 #23	ANPEP (ENSLBEG00000007049) #24	ANPEP (ENSLBEG00000007647) #25	ap3s2 (ENSLBEG00000008117) #26
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00940000163460.a.a.b	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Perciformes	ANCESTRAL SPECIES	15	ENSGT00940000154856.A.b.f #31	ENSGT00940000154720	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Cottioidei	ANCESTRAL SPECIES	35	ENSGT00940000157540.B #36	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b	ENSGT00940000157431.c.b
Lumpfish	MODERN SPECIES	18	SLCO3A1 (ENSCLMG00005017205) #35	gnrhr2 (ENSCLMG00005017208) #9	GLO1 (ENSCLMG00005017209) #10	eprs1 (ENSCLMG00005017232) #11	TDP1 (ENSCLMG00005017721) #12	hmbox1a (ENSCLMG00005017732) #13	KIF13B (ENSCLMG00005017782) #14	ENSCLMG00005019795 #15	PDPR (ENSCLMG00005019797) #16	mrps11 (ENSCLMG00005019803) #17	mrpl46 (ENSCLMG00005019804) #18	NTRK3 (ENSCLMG00005019805) #19	ENSCLMG00005019807 ##20	ENSCLMG00005019811 ##20	sv2ba (ENSCLMG00005019819) #21	mespba (ENSCLMG00005019831) #22	mespaa (ENSCLMG00005019833) #23	ANPEP (ENSCLMG00005019880) #24	ANPEP (ENSCLMG00005020525) #25	AP3S2 (ENSCLMG00005020579) #26	igf1rb (ENSCLMG00005020609) #27	LRRC28 (ENSCLMG00005022011) #28	SNAP25 (ENSCLMG00005022015) #29	COX5A (ENSCLMG00005022016) #30	fam219b (ENSCLMG00005022017) #8	ENSCLMG00005022018 #7	ENSCLMG00005022020	cyp1a (ENSCLMG00005022023)	EDC3 (ENSCLMG00005000006)	CSK (ENSCLMG00005000057)	cplx3a (ENSCLMG00005000747)
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT01080000257410.A.f.l #35	ENSGT00940000154856.A.b.f #31	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Channel bull blenny	MODERN SPECIES	17	ENSCGOG00000002301	ENSCGOG00000002300	ENSCGOG00000002298	SHANK2 (ENSCGOG00000002295)	CTTN (ENSCGOG00000002061)	ppfia1 (ENSCGOG00000001031)	ENSCGOG00000000982	ENSCGOG00000000971 #15	PDPR (ENSCGOG00000000920) #16	mrps11 (ENSCGOG00000000914) #17	mrpl46 (ENSCGOG00000000913) #18	NTRK3 (ENSCGOG00000000853) #19	ENSCGOG00000000842	ENSCGOG00000000840	sv2ba (ENSCGOG00000000812) #21	mespba (ENSCGOG00000000799) #22	mespaa (ENSCGOG00000000796) #23	ANPEP (ENSCGOG00000000704) #24	ap3s2 (ENSCGOG00000000654) #26	ENSCGOG00000000647 #27	ENSCGOG00000000644	lsm14ab (ENSCGOG00000000640)	ss18l2 (ENSCGOG00000000637)	GARRE1 (ENSCGOG00000000516)	gpib (ENSCGOG00000024133)	wtip (ENSCGOG00000024096)	sdr42e1 (ENSCGOG00000024095)	cnep1r1 (ENSCGOG00000024091)	heatr3 (ENSCGOG00000024017)	tent4b (ENSCGOG00000024003)	adcy7 (ENSCGOG00000023963)
Pike perch	MODERN SPECIES	100	SLCO3A1 (ENSSLUG00000021828) #35	ENSSLUG00000021840 #31	ENSSLUG00000021844 #9	GLO1 (ENSSLUG00000021856) #10	eprs1 (ENSSLUG00000022139) #11	TDP1 (ENSSLUG00000024598) #12	hmbox1a (ENSSLUG00000024645) #13	KIF13B (ENSSLUG00000024720) #14	ENSSLUG00000024959 #15	PDPR (ENSSLUG00000024972) #16	mrps11 (ENSSLUG00000024992) #17	mrpl46 (ENSSLUG00000024994) #18	NTRK3 (ENSSLUG00000024999) #19	ENSSLUG00000025016 ##20	sv2ba (ENSSLUG00000025032) #21	mespba (ENSSLUG00000025038) #22	mespaa (ENSSLUG00000025043) #23	ANPEP (ENSSLUG00000025113) #24	ANPEP (ENSSLUG00000025307) #25	ap3s2 (ENSSLUG00000025346) #26	igf1rb (ENSSLUG00000025493) #27	LRRC28 (ENSSLUG00000025824) #28	SNAP25 (ENSSLUG00000025825) #29	ENSSLUG00000025828	MAPK8IP1 (ENSSLUG00000025830)
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000157540.B #36	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Gilthead seabream	MODERN SPECIES	18	ENSSAUG00010000136 #34	ENSSAUG00010026017	GLO1 (ENSSAUG00010026016) #10	eprs1 (ENSSAUG00010024284) #11	TDP1 (ENSSAUG00010024086) #12	hmbox1a (ENSSAUG00010024085) #13	KIF13B (ENSSAUG00010024064) #14	ENSSAUG00010024053 #15	PDPR (ENSSAUG00010023846) #16	mrps11 (ENSSAUG00010023841) #17	mrpl46 (ENSSAUG00010023839) #18	NTRK3 (ENSSAUG00010023776) #19	ENSSAUG00010023763 #20	ENSSAUG00010023754 #20	sv2ba (ENSSAUG00010023666) #21	mespba (ENSSAUG00010023650) #22	mespaa (ENSSAUG00010023648) #23	ANPEP (ENSSAUG00010023403) #24	ANPEP (ENSSAUG00010023189) #25	ap3s2 (ENSSAUG00010023180) #26	igf1rb (ENSSAUG00010022954) #27	LRRC28 (ENSSAUG00010022944) #28	SNAP25 (ENSSAUG00010022941) #29	COX5a2 (ENSSAUG00010022937) #30	fam219b (ENSSAUG00010022936) #8	ENSSAUG00010022934 #7	ENSSAUG00010022931	ENSSAUG00010022923	ENSSAUG00010022922	gatm (ENSSAUG00010022921)	ENSSAUG00010022874
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00940000157540.B #36	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
European seabass	MODERN SPECIES	18	ENSDLAG00005015916 #36	ENSDLAG00005015990 #35	ENSDLAG00005016008 #9	ENSDLAG00005016013 #10	ENSDLAG00005016087 #11	ENSDLAG00005019267 #12	hmbox1a (ENSDLAG00005019491) #13	ENSDLAG00005019529 #14	ENSDLAG00005032823 #15	ENSDLAG00005020209 #16	mrps11 (ENSDLAG00005020360) #17	mrpl46 (ENSDLAG00005020366) #18	NTRK3 (ENSDLAG00005020387) #19	ENSDLAG00005020703 #20	sv2ba (ENSDLAG00005020743) #21	mespba (ENSDLAG00005033688) #22	ENSDLAG00005021075 #25	ENSDLAG00005021362 #26	igf1rb (ENSDLAG00005021438) #27	ENSDLAG00005030001 #28	ENSDLAG00005028654 #29	ENSDLAG00005023073 #30	ENSDLAG00005029723 #8	ENSDLAG00005023087 #7	ENSDLAG00005030418	ENSDLAG00005023097	ENSDLAG00005023100	CYP1A2 (ENSDLAG00005023109)	ENSDLAG00005030853	CSK (ENSDLAG00005023158)	ENSDLAG00005033157
Large yellow croaker	MODERN SPECIES	480	ENSLCRG00005021657 #31	ENSLCRG00005021656 #9	ENSLCRG00005021655	GLO1 (ENSLCRG00005021653) #10	eprs1 (ENSLCRG00005020114) #11	TDP1 (ENSLCRG00005020076) #12	hmbox1a (ENSLCRG00005020072) #13	KIF13B (ENSLCRG00005017267) #14	ENSLCRG00005017214 #15	PDPR (ENSLCRG00005017184) #16	mrps11 (ENSLCRG00005017180) #17	mrpl46 (ENSLCRG00005017179) #18	NTRK3 (ENSLCRG00005016786) #19	ENSLCRG00005016779 #20	sv2ba (ENSLCRG00005016553) #21	mespba (ENSLCRG00005016550) #22	mespaa (ENSLCRG00005016549) #23	ANPEP (ENSLCRG00005016136) #24	ANPEP (ENSLCRG00005015914) #25	ap3s2 (ENSLCRG00005015910) #26	igf1rb (ENSLCRG00005012567) #27	LRRC28 (ENSLCRG00005012542) #28	SNAP25 (ENSLCRG00005012537) #29	COX5A (ENSLCRG00005012535) #30	fam219b (ENSLCRG00005012530) #8	ENSLCRG00005012528 #7	ENSLCRG00005012524	ENSLCRG00005012522	ENSLCRG00005012520	cyp1a (ENSLCRG00005012519)	edc3 (ENSLCRG00005012518)
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00940000161051.a.b #37	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Cichlidae	ANCESTRAL SPECIES	11	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b.o.b	ENSGT00940000158358.b.o.a	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a
Nile tilapia	MODERN SPECIES		SLCO3A1 (ENSONIG00000003064) #35	ENSONIG00000003063 #9	glo1 (ENSONIG00000041239) #10	eprs1 (ENSONIG00000003054) #11	TDP1 (ENSONIG00000003045) #12	hmbox1a (ENSONIG00000003040) #13	KIF13B (ENSONIG00000003026) #14	ENSONIG00000036476 #15	PDPR (ENSONIG00000003019) #16	mrps11 (ENSONIG00000034606) #17	mrpl46 (ENSONIG00000027702) #18	ENSONIG00000032719	NTRK3 (ENSONIG00000003007) #19	ENSONIG00000003000 ##20	sv2ba (ENSONIG00000002992) #21	mespba (ENSONIG00000028668) #22	mespaa (ENSONIG00000038969) #23	ANPEP (ENSONIG00000002988) #24	ANPEP (ENSONIG00000002978) #25	AP3S2 (ENSONIG00000035244) #26	igf1rb (ENSONIG00000002961) #27	LRRC28 (ENSONIG00000002957) #28	SNAP25 (ENSONIG00000002954) #29	cox5aa (ENSONIG00000002953) #30	ENSONIG00000002949 #7	ENSONIG00000042687	ENSONIG00000042922	ENSONIG00000041695	cyp1a (ENSONIG00000041126)	edc3 (ENSONIG00000002932)	CSK (ENSONIG00000002920)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b.o.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Haplochromini	ANCESTRAL SPECIES	11	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b.o.b	ENSGT00940000158358.b.p	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a
Burton s mouthbrooder	MODERN SPECIES	272	SLCO3A1 (ENSHBUG00000000580) #35	ENSHBUG00000019475 #9	GLO1 (ENSHBUG00000019502) #10	eprs1 (ENSHBUG00000019547) #11	TDP1 (ENSHBUG00000019614) #12	hmbox1a (ENSHBUG00000019655) #13	KIF13B (ENSHBUG00000019693) #14	ENSHBUG00000019705 #15	PDPR (ENSHBUG00000019777) #16	mrps11 (ENSHBUG00000019804) #17	mrpl46 (ENSHBUG00000019818) #18	NTRK3 (ENSHBUG00000019944) #19	ENSHBUG00000019973 ##20	ENSHBUG00000020054 #20	sv2ba (ENSHBUG00000020149) #21	mespba (ENSHBUG00000020166) #22	mespaa (ENSHBUG00000020178) #23	ANPEP (ENSHBUG00000020203) #24	ANPEP (ENSHBUG00000020312) #25	ap3s2 (ENSHBUG00000020370) #26	igf1rb (ENSHBUG00000020501) #27	LRRC28 (ENSHBUG00000020556) #28	SNAP25 (ENSHBUG00000020586) #29	cox5aa (ENSHBUG00000020595) #30	fam219b (ENSHBUG00000000774) #8	ENSHBUG00000020662 #7	ENSHBUG00000020756	ENSHBUG00000020784	ENSHBUG00000020795	cyp1a (ENSHBUG00000020804)	edc3 (ENSHBUG00000020817)
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000160789.D.b.b	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b.o.b	ENSGT00940000158358.b.o.a	ENSGT00940000158358.b.p	ENSGT00930000151452	ENSGT00390000014907.A
P. nyererei	MODERN SPECIES	320	GLO1 (ENSPNYG00000007905) #10	eprs1 (ENSPNYG00000007931) #11	TDP1 (ENSPNYG00000007981) #12	hmbox1a (ENSPNYG00000008008) #13	KIF13B (ENSPNYG00000008080) #14	ENSPNYG00000008291 #15	ENSPNYG00000008354	PDPR (ENSPNYG00000008380) #16	mrps11 (ENSPNYG00000008428) #17	mrpl46 (ENSPNYG00000008444) #18	NTRK3 (ENSPNYG00000008457) #19	ENSPNYG00000008492	ENSPNYG00000008515 ##20	ENSPNYG00000008614 #20	sv2ba (ENSPNYG00000008670) #21	mespba (ENSPNYG00000008860) #22	mespaa (ENSPNYG00000008885) #23	ANPEP (ENSPNYG00000008900) #24	ANPEP (ENSPNYG00000009033) #25	ap3s2 (ENSPNYG00000009379) #26	igf1rb (ENSPNYG00000009411) #27	LRRC28 (ENSPNYG00000009471) #28	SNAP25 (ENSPNYG00000009503) #29	cox5aa (ENSPNYG00000009523) #30	fam219b (ENSPNYG00000009543) #8	ENSPNYG00000009560 #7	ENSPNYG00000009587	ENSPNYG00000009620	ENSPNYG00000009641	cyp1a (ENSPNYG00000009659)	edc3 (ENSPNYG00000009669)
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000160789.D.b.b	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b.o.b	ENSGT00940000158358.b.o.a	ENSGT00940000158358.b.p	ENSGT00930000151452	ENSGT00390000014907.A
Eastern happy	MODERN SPECIES		hmbox1a (ENSACLG00000020128) #13	KIF13B (ENSACLG00000020030) #14	ENSACLG00000020014 #15	ENSACLG00000019996	PDPR (ENSACLG00000019932) #16	mrps11 (ENSACLG00000019910) #17	ENSACLG00000019896	mrpl46 (ENSACLG00000019884) #18	ENSACLG00000019876	ENSACLG00000019849	NTRK3 (ENSACLG00000019754) #19	ENSACLG00000019740	ENSACLG00000019721 ##20	ENSACLG00000019669 #20	sv2ba (ENSACLG00000019613) #21	mespba (ENSACLG00000019604) #22	mespaa (ENSACLG00000019590) #23	ANPEP (ENSACLG00000019551) #24	ANPEP (ENSACLG00000019501) #25	ap3s2 (ENSACLG00000019469) #26	igf1rb (ENSACLG00000019368) #27	LRRC28 (ENSACLG00000019309) #28	SNAP25 (ENSACLG00000019266) #29	cox5aa (ENSACLG00000019070) #30	fam219b (ENSACLG00000019012) #8	ENSACLG00000018973 #7	ENSACLG00000018954	ENSACLG00000018905	ENSACLG00000018849	ENSACLG00000018843	ENSACLG00000018838
Zebra mbuna	MODERN SPECIES	1091	GLO1 (ENSMZEG00005004926) #10	eprs1 (ENSMZEG00005004950) #11	TDP1 (ENSMZEG00005005003) #12	hmbox1a (ENSMZEG00005005042) #13	KIF13B (ENSMZEG00005005077) #14	ENSMZEG00005005091 #15	ENSMZEG00005005097	PDPR (ENSMZEG00005005109) #16	mrps11 (ENSMZEG00005005157) #17	mrpl46 (ENSMZEG00005005163) #18	NTRK3 (ENSMZEG00005005176) #19	ENSMZEG00005005212	ENSMZEG00005005234 ##20	ENSMZEG00005005313 #20	sv2ba (ENSMZEG00005005328) #21	mespba (ENSMZEG00005005392) #22	mespaa (ENSMZEG00005005402) #23	ANPEP (ENSMZEG00005005427) #24	ANPEP (ENSMZEG00005005456) #25	ap3s2 (ENSMZEG00005005493) #26	igf1rb (ENSMZEG00005005511) #27	LRRC28 (ENSMZEG00005005532) #28	SNAP25 (ENSMZEG00005005539) #29	cox5aa (ENSMZEG00005005551) #30	fam219b (ENSMZEG00005005569) #8	ENSMZEG00005005588 #7	ENSMZEG00005005603	ENSMZEG00005005614	ENSMZEG00005005619	ENSMZEG00005005625	ENSMZEG00005005633
Lyretail cichlid	MODERN SPECIES	290	ENSNBRG00000005637 #9	GLO1 (ENSNBRG00000005981) #10	eprs1 (ENSNBRG00000006007) #11	TDP1 (ENSNBRG00000006120) #12	hmbox1a (ENSNBRG00000006168) #13	KIF13B (ENSNBRG00000006223) #14	ENSNBRG00000006471 #15	ENSNBRG00000006494	PDPR (ENSNBRG00000006515) #16	mrps11 (ENSNBRG00000006581) #17	mrpl46 (ENSNBRG00000006597) #18	NTRK3 (ENSNBRG00000006614) #19	ENSNBRG00000006659 ##20	ENSNBRG00000006808 ##20	sv2ba (ENSNBRG00000006848) #21	mespba (ENSNBRG00000007019) #22	mespaa (ENSNBRG00000007037) #23	ANPEP (ENSNBRG00000007061) #24	ANPEP (ENSNBRG00000007204) #25	ap3s2 (ENSNBRG00000007647) #26	igf1rb (ENSNBRG00000007674) #27	ENSNBRG00000007743	SNAP25 (ENSNBRG00000007751) #29	cox5aa (ENSNBRG00000007764) #30	fam219b (ENSNBRG00000007775) #8	ENSNBRG00000007785 #7	ENSNBRG00000007832	ENSNBRG00000007845	cyp1a (ENSNBRG00000007864)	edc3 (ENSNBRG00000007881)	CSK (ENSNBRG00000007926)
Midas cichlid	MODERN SPECIES	109	GLO1 (ENSACIG00000007972) #10	eprs1 (ENSACIG00000007907) #11	ENSACIG00000007894	TDP1 (ENSACIG00000007821) #12	hmbox1a (ENSACIG00000007797) #13	ENSACIG00000007745 #14	ENSACIG00000007733 #15	ENSACIG00000007729 #16	PDPR (ENSACIG00000007693) #16	mrps11 (ENSACIG00000007679) #17	mrpl46 (ENSACIG00000007620) #18	NTRK3 (ENSACIG00000007582) #19	ENSACIG00000007493 ##20	ENSACIG00000007473 #20	sv2ba (ENSACIG00000007439) #21	mespba (ENSACIG00000007425) #22	mespaa (ENSACIG00000007411) #23	ANPEP (ENSACIG00000007161) #24	ANPEP (ENSACIG00000007083) #25	ap3s2 (ENSACIG00000007071) #26	ENSACIG00000007062	igf1rb (ENSACIG00000007009) #27	LRRC28 (ENSACIG00000006973) #28	SNAP25 (ENSACIG00000006954) #29	COX5A (ENSACIG00000006936) #30	fam219b (ENSACIG00000006913) #8	ENSACIG00000006888 #7	ENSACIG00000006859	ENSACIG00000006828	ENSACIG00000006809	cyp1a (ENSACIG00000005416)
Pomacentridae	ANCESTRAL SPECIES	79								ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Bicolor damselfish	MODERN SPECIES	613											ENSSPAG00000006865 #19	ENSSPAG00000006882 #20	ENSSPAG00000006914 #20	ENSSPAG00000006928 #20	sv2ba (ENSSPAG00000006939) #21	mespba (ENSSPAG00000006971) #22	mespaa (ENSSPAG00000006988) #23	ANPEP (ENSSPAG00000007005) #24	ANPEP (ENSSPAG00000007043) #25	ap3s2 (ENSSPAG00000007064) #26	igf1rb (ENSSPAG00000007089) #27	LRRC28 (ENSSPAG00000007126) #28
Pomacentridae_A	ANCESTRAL SPECIES	78								ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Spiny chromis	MODERN SPECIES	866											ENSAPOG00000004994 ##20	ENSAPOG00000005007 ##20	ENSAPOG00000005015 ##20	ENSAPOG00000005037 #20	sv2ba (ENSAPOG00000005314) #21	mespba (ENSAPOG00000005378) #22	mespaa (ENSAPOG00000005398) #23	ANPEP (ENSAPOG00000005421) #24	ANPEP (ENSAPOG00000005536) #25	ap3s2 (ENSAPOG00000005579) #26	igf1rb (ENSAPOG00000005700) #27	ENSAPOG00000005721 #28
Amphiprion	ANCESTRAL SPECIES	111	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00390000009077.c	ENSGT01080000257344.a.b.b.b.b.b.b.a.a.b.a.a.a	ENSGT01030000234589.g.a.e.a.c.a	ENSGT01080000257344.a.b.b.b.b.b.b.a.a.b.b.a	ENSGT01030000234589.g.a.e.a.c.b	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b	ENSGT00940000157431.c.b
Clown anemonefish	MODERN SPECIES	3229			ENSAOCG00000013921	ENSAOCG00000013944	ENSAOCG00000013974	ENSAOCG00000013993	ENSAOCG00000014018 #15	PDPR (ENSAOCG00000000909) #16	mrps11 (ENSAOCG00000000916) #17	mrpl46 (ENSAOCG00000014108) #18	NTRK3 (ENSAOCG00000014175) #19	ENSAOCG00000014223 ##20	ENSAOCG00000014234 ##20	ENSAOCG00000014263 #20	sv2ba (ENSAOCG00000014489) #21	mespba (ENSAOCG00000014528) #22	mespaa (ENSAOCG00000014575) #23	ANPEP (ENSAOCG00000014657) #24	ANPEP (ENSAOCG00000014707) #25	ap3s2 (ENSAOCG00000014732) #26	igf1rb (ENSAOCG00000014811) #27	LRRC28 (ENSAOCG00000014863) #28	ENSAOCG00000014881	SNAP25 (ENSAOCG00000001031) #29	ENSAOCG00000014924 #30	fam219b (ENSAOCG00000001040) #8	ENSAOCG00000001819 #7	ENSAOCG00000001047	ENSAOCG00000015025	cct6a (ENSAOCG00000015067)	ENSAOCG00000015123
Orange clownfish	MODERN SPECIES		si:ch211-260e23.9 (ENSAPEG00000006291)	si:ch211-260e23.8 (ENSAPEG00000006308)	ENSAPEG00000006320	ENSAPEG00000006333	ENSAPEG00000006377	ENSAPEG00000006403	ENSAPEG00000006448	ENSAPEG00000006468 #15	PDPR (ENSAPEG00000006486) #16	mrps11 (ENSAPEG00000006598) #17	mrpl46 (ENSAPEG00000006612) #18	NTRK3 (ENSAPEG00000006663) #19	ENSAPEG00000006740 ##20	ENSAPEG00000006914 #20	sv2ba (ENSAPEG00000006939) #21	mespba (ENSAPEG00000006955) #22	mespaa (ENSAPEG00000006989) #23	ANPEP (ENSAPEG00000007047) #24	ENSAPEG00000007158	ANPEP (ENSAPEG00000007197) #25	ap3s2 (ENSAPEG00000007481) #26	igf1rb (ENSAPEG00000007516) #27	LRRC28 (ENSAPEG00000007582) #28	SNAP25 (ENSAPEG00000007644) #29	ENSAPEG00000007680 #30	fam219b (ENSAPEG00000007693) #8	ENSAPEG00000007734 #7	ENSAPEG00000007760	ENSAPEG00000007782	cyp1a (ENSAPEG00000007811)	edc3 (ENSAPEG00000007841)
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.n ##20	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00940000157540.B #36	ENSGT01080000257410.A.f.l #35	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00390000009312.b #10	ENSGT00550000074815 #11	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.n ##20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00390000016435.g.b
Aplocheiloidei	ANCESTRAL SPECIES																	ENSGT00530000063712.a.a.o.b #22
Turquoise killifish	MODERN SPECIES	786																mespbb (ENSNFUG00015013996) #22	ANPEP (ENSNFUG00015013991) #25
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00390000013049	ENSGT00940000156738.d	ENSGT00940000153731.a.b.d	ENSGT00940000156932.a	ENSGT00940000154954.nb.b	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158534.a.a	ENSGT00940000166058	ENSGT00940000156346.c.a	ENSGT00940000156346.d	ENSGT00510000048144	ENSGT00940000157599.c.b	ENSGT00940000165857.a	ENSGT00940000159833	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00940000157431.c.b
NAME_4	ANCESTRAL SPECIES	135	ENSGT01030000234542.b.a.a.a.b	ENSGT00390000013049	ENSGT00940000156738.d	ENSGT00940000153731.a.b.d	ENSGT00940000156932.a	ENSGT00940000154954.nb.b	ENSGT00940000154470.b	ENSGT00390000015600.c.a	ENSGT00940000158534.a.a	ENSGT00940000166058	ENSGT00940000156346.c.a	ENSGT00510000048144	ENSGT00940000157599.c.b	ENSGT00940000165857.a	ENSGT00940000159833	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452
Mummichog	MODERN SPECIES	2254					KCTD15 (ENSFHEG00000010118)	CHST8 (ENSFHEG00000010137)	pepd (ENSFHEG00000010186)	THSD4 (ENSFHEG00000010235)	ENSFHEG00000010288	larp6a (ENSFHEG00000010312)	ENSFHEG00000010406	ulk3 (ENSFHEG00000010446)	ENSFHEG00000010464	cplx3a (ENSFHEG00000010469)	cyp1a (ENSFHEG00000010510)	mespba (ENSFHEG00000010516) #22	mespaa (ENSFHEG00000010531) #23	ANPEP (ENSFHEG00000011190) #24	ANPEP (ENSFHEG00000011236) #25	ap3s2 (ENSFHEG00000011261) #26	igf1rb (ENSFHEG00000011372) #27	LRRC28 (ENSFHEG00000011419) #28	SNAP25 (ENSFHEG00000011797) #29	cox5aa (ENSFHEG00000011837) #30	fam219b (ENSFHEG00000011847) #8	ENSFHEG00000011856 #7	ENSFHEG00000011869	ENSFHEG00000011875	ENSFHEG00000011882	tmed3 (ENSFHEG00000011912)	si:ch211-107o10.3 (ENSFHEG00000011955)
Sheepshead minnow	MODERN SPECIES	1431											ENSCVAG00000015776	zgc:194679 (ENSCVAG00000015780)	si:ch211-107o10.3 (ENSCVAG00000015798)	tmed3 (ENSCVAG00000015803)	tmed3 (ENSCVAG00000000706)	mespbb (ENSCVAG00000015828) #22	mespaa (ENSCVAG00000015843) #23	ENSCVAG00000015864	ENSCVAG00000015875
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00390000013049	ENSGT00940000156738.d	ENSGT00940000153731.a.b.d	ENSGT00940000156932.a	ENSGT00940000154954.nb.b	ENSGT00940000172895	ENSGT00390000015600.c.a	ENSGT00940000158534.a.a	ENSGT00940000166058	ENSGT00940000156346.c.a	ENSGT00940000156346.d	ENSGT00510000048144	ENSGT00940000157599.c.b	ENSGT00940000165857.a	ENSGT00940000159833	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00940000157431.c.b
Platyfish	MODERN SPECIES	18	FBXO22 (ENSXMAG00000030093)	TMEM266 (ENSXMAG00000017193)	ISL2 (ENSXMAG00000017187)	pstpip1b (ENSXMAG00000023194)	tspan3b (ENSXMAG00000017147)	ENSXMAG00000026482	sec11a (ENSXMAG00000017133)	ENSXMAG00000017127	cry5 (ENSXMAG00000017096)	ENSXMAG00000024903	FRMD5 (ENSXMAG00000017063)	wdr76 (ENSXMAG00000017055)	RASGRF1 (ENSXMAG00000017009)	si:ch211-107o10.3 (ENSXMAG00000016987)	tmed3 (ENSXMAG00000016983)	mespba (ENSXMAG00000016981) #22	ENSXMAG00000021810 ##23	ANPEP (ENSXMAG00000016971) #24	ANPEP (ENSXMAG00000016913) #25	ap3s2 (ENSXMAG00000027626) #26	igf1rb (ENSXMAG00000016851) #27	LRRC28 (ENSXMAG00000016831) #28	SNAP25 (ENSXMAG00000027012) #29	cox5aa (ENSXMAG00000029675) #30	fam219b (ENSXMAG00000016809) #8	ENSXMAG00000016801 #7	ENSXMAG00000021603	ENSXMAG00000016783	cyp1a (ENSXMAG00000016761)	CSK (ENSXMAG00000016732)	cplx3a (ENSXMAG00000026598)
Poecilia	ANCESTRAL SPECIES	4	ENSGT00390000013049	ENSGT00940000156738.d	ENSGT00940000153731.a.b.d	ENSGT00940000156932.a	ENSGT00940000154954.nb.b	ENSGT00940000172895	ENSGT00390000015600.c.a	ENSGT00940000158534.a.a	ENSGT00940000166058	ENSGT00940000156346.c.a	ENSGT00940000156346.d	ENSGT00510000048144	ENSGT00940000157599.c.b	ENSGT00940000165857.a	ENSGT00940000159833	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00940000157431.c.b
NAME_6	ANCESTRAL SPECIES	39	ENSGT01030000234542.b.a.a.b.a.a.a.a.b	ENSGT00390000013049	ENSGT00940000156738.d	ENSGT00940000153731.a.b.d	ENSGT00940000156932.a	ENSGT00940000154954.nb.b	ENSGT00940000172895	ENSGT00390000015600.c.a	ENSGT00940000158534.a.a	ENSGT00940000166058	ENSGT00940000156346.c.a	ENSGT00510000048144	ENSGT00940000157599.c.b	ENSGT00940000165857.a	ENSGT00940000159833	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00930000151452	ENSGT00390000014907.A	ENSGT00950000183037.A.a	ENSGT00940000157431.c.b
Sailfin molly	MODERN SPECIES	366																mespba (ENSPLAG00000007254) #22	ANPEP (ENSPLAG00000007726) #24	ANPEP (ENSPLAG00000007781) #25	ANPEP (ENSPLAG00000007800) #25	ap3s2 (ENSPLAG00000007826) #26	igf1rb (ENSPLAG00000007907) #27	LRRC28 (ENSPLAG00000007958) #28	SNAP25 (ENSPLAG00000007981) #29	cox5aa (ENSPLAG00000008007) #30	fam219b (ENSPLAG00000008020) #8	ENSPLAG00000008030 #7	ENSPLAG00000008047	ENSPLAG00000008057
Amazon molly	MODERN SPECIES	488	tln2a (ENSPFOG00000016520)	ENSPFOG00000016486	FBXO22 (ENSPFOG00000016466)	TMEM266 (ENSPFOG00000016426)	ISL2 (ENSPFOG00000016399)	pstpip1b (ENSPFOG00000016341)	tspan3b (ENSPFOG00000016313)	sec11a (ENSPFOG00000016298)	ENSPFOG00000016272	cry5 (ENSPFOG00000016246)	FRMD5 (ENSPFOG00000016129)	wdr76 (ENSPFOG00000016083)	RASGRF1 (ENSPFOG00000016006)	si:ch211-107o10.3 (ENSPFOG00000015972)	tmed3 (ENSPFOG00000015967)	mespba (ENSPFOG00000015962) #22	mespaa (ENSPFOG00000015959) #23	ANPEP (ENSPFOG00000015921) #24	ANPEP (ENSPFOG00000015846) #25	ap3s2 (ENSPFOG00000015829) #26	igf1rb (ENSPFOG00000015585) #27	LRRC28 (ENSPFOG00000015513) #28	SNAP25 (ENSPFOG00000015494) #29	COX5A (ENSPFOG00000015470) #30	fam219b (ENSPFOG00000015439) #8	ENSPFOG00000015407 #7	ENSPFOG00000015380	ENSPFOG00000015375	ENSPFOG00000015326	cyp1a (ENSPFOG00000015284)	CSK (ENSPFOG00000015195)
Oryzias	ANCESTRAL SPECIES	13	ENSGT00390000016435.g.b	ENSGT00950000183037.A.a	ENSGT00390000014907.A	ENSGT00930000151452	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00550000074815 #11	ENSGT00390000009312.b #10	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00940000161051.a.b #37
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00390000016435.g.b	ENSGT00950000183037.A.a	ENSGT00390000014907.A	ENSGT00930000151452	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00550000074815 #11	ENSGT00390000009312.b #10	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT01080000257410.A.f.l #35
Japanese Medaka HdrR	MODERN SPECIES	17	ENSORLG00000014399	cyp1a (ENSORLG00000014421)	ENSORLG00000028447	ENSORLG00000028316	TDP1 (ENSORLG00000014455) #12	hmbox1a (ENSORLG00000014467) #13	ENSORLG00000014507 #14	ENSORLG00000014513 #15	PDPR (ENSORLG00000014564) #16	mrps11 (ENSORLG00000014573) #17	mrpl46 (ENSORLG00000014585) #18	NTRK3 (ENSORLG00000014606) #19	ENSORLG00000014616 ##20	ENSORLG00000028055 #20	sv2ba (ENSORLG00000014648) #21	mespba (ENSORLG00000014656) #22	mespaa (ENSORLG00000014659) #23	ENSORLG00000029229 #24	ENSORLG00000014691 #25	ap3s2 (ENSORLG00000014699) #26	igf1rb (ENSORLG00000014732) #27	LRRC28 (ENSORLG00000014753) #28	ENSORLG00000024677 #29	COX5A (ENSORLG00000014758) #30	fam219b (ENSORLG00000028616) #8	ENSORLG00000014769 #7	ENSORLG00000014777	ENSORLG00000025005	eprs1 (ENSORLG00000014819) #11	GLO1 (ENSORLG00000014841) #10	gnrh-r1 (ENSORLG00000019213) #9
Chinese medaka	MODERN SPECIES	901	edc3 (ENSOSIG00000022912)	cyp1a (ENSOSIG00000022847)	ENSOSIG00000022845	TDP1 (ENSOSIG00000022738) #12	hmbox1a (ENSOSIG00000022716) #13	KIF13B (ENSOSIG00000022594) #14	ENSOSIG00000022560 #15	PDPR (ENSOSIG00000022555) #16	mrps11 (ENSOSIG00000022548) #17	mrpl46 (ENSOSIG00000022545) #18	ENSOSIG00000022544	NTRK3 (ENSOSIG00000022542) #19	ENSOSIG00000022540 ##20	ENSOSIG00000022538 ##20	sv2ba (ENSOSIG00000022513) #21	mespba (ENSOSIG00000022483) #22	mespaa (ENSOSIG00000022481) #23	ANPEP (ENSOSIG00000022464) #25	ap3s2 (ENSOSIG00000022438) #26	ENSOSIG00000022435	igf1rb (ENSOSIG00000020109) #27	LRRC28 (ENSOSIG00000019896) #28	SNAP25 (ENSOSIG00000019892) #29	cox5aa (ENSOSIG00000019853) #30	fam219b (ENSOSIG00000019845) #8	ENSOSIG00000019840 #7
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00390000016435.g.b	ENSGT00950000183037.A.a	ENSGT00390000014907.A	ENSGT00930000151452	ENSGT00390000002211 #12	ENSGT00940000154928.c.a.a #13	ENSGT00940000155500.e #14	ENSGT00950000183149.C.a #15	ENSGT00940000159082 #16	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.m.b ##20	ENSGT00940000154146.b.a.m.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00950000182843.a.a.a.b.a.a.a.b #29	ENSGT00390000001424.wb.b #30	ENSGT00390000000860.a #8	ENSGT00940000156052.k.a #7	ENSGT00940000158358.b	ENSGT00550000074815 #11	ENSGT00390000009312.b #10	ENSGT01050000244841.A.a.b.qb.a.b #9	ENSGT00940000161051.a.b.t.a.b.b #37
Indian medaka	MODERN SPECIES	26	edc3 (ENSOMEG00000017354)	cyp1a (ENSOMEG00000017398)	ENSOMEG00000017458	ENSOMEG00000017486	TDP1 (ENSOMEG00000017556) #12	hmbox1a (ENSOMEG00000017612) #13	KIF13B (ENSOMEG00000017789) #14	ENSOMEG00000017846 #15	PDPR (ENSOMEG00000017900) #16	mrps11 (ENSOMEG00000017915) #17	mrpl46 (ENSOMEG00000017928) #18	NTRK3 (ENSOMEG00000018088) #19	ENSOMEG00000018188 ##20	ENSOMEG00000018205 #20	sv2ba (ENSOMEG00000018247) #21	mespba (ENSOMEG00000018258) #22	mespaa (ENSOMEG00000018266) #23	ENSOMEG00000018285 #24	ANPEP (ENSOMEG00000018403) #24	ANPEP (ENSOMEG00000018311) #25	ap3s2 (ENSOMEG00000018433) #26	igf1rb (ENSOMEG00000018503) #27	LRRC28 (ENSOMEG00000018559) #28	SNAP25 (ENSOMEG00000018629) #29	cox5aa (ENSOMEG00000018663) #30	fam219b (ENSOMEG00000018688) #8	ENSOMEG00000018729 #7	ENSOMEG00000018829	eprs1 (ENSOMEG00000018971) #11	GLO1 (ENSOMEG00000019001) #10	ENSOMEG00000019022 #9
Javanese ricefish	MODERN SPECIES	17	cyp1a (ENSOJAG00000007775)	ENSOJAG00000007796	ENSOJAG00000007809	ENSOJAG00000007878 #12	hmbox1a (ENSOJAG00000008848) #13	KIF13B (ENSOJAG00000008918) #14	ENSOJAG00000011281 #15	PDPR (ENSOJAG00000011318) #16	mrps11 (ENSOJAG00000011671) #17	mrpl46 (ENSOJAG00000011679) #18	ENSOJAG00000011688	NTRK3 (ENSOJAG00000011726) #19	ENSOJAG00000011913	ENSOJAG00000011927 #20	sv2ba (ENSOJAG00000012014) #21	mespba (ENSOJAG00000012066) #22	mespaa (ENSOJAG00000012083) #23	snrpa1 (ENSOJAG00000012259)	ANPEP (ENSOJAG00000012314) #25	ap3s2 (ENSOJAG00000012478) #26	igf1rb (ENSOJAG00000012573) #27	LRRC28 (ENSOJAG00000014937) #28	SNAP25 (ENSOJAG00000014961) #29	cox5aa (ENSOJAG00000014985) #30	fam219b (ENSOJAG00000015091) #8	ENSOJAG00000015099 #7	ENSOJAG00000015113	ENSOJAG00000015142	eprs1 (ENSOJAG00000015175) #11	GLO1 (ENSOJAG00000017126) #10	gnrhr2 (ENSOJAG00000017157) #9
Tiger tail seahorse	MODERN SPECIES	132	CSK (ENSHCOG00000001291)	cyp1a (ENSHCOG00000001298)	ENSHCOG00000001306	ENSHCOG00000001308	ENSHCOG00000001313	ENSHCOG00000001317	ENSHCOG00000001326	ENSHCOG00000001332 #15	PDPR (ENSHCOG00000001341) #16	mrps11 (ENSHCOG00000001347) #17	mrpl46 (ENSHCOG00000001350) #18	NTRK3 (ENSHCOG00000000048) #19	ENSHCOG00000001367 #20	ENSHCOG00000001377 #20	sv2ba (ENSHCOG00000001419) #21	mespba (ENSHCOG00000001441) #22	ENSHCOG00000001448	ANPEP (ENSHCOG00000001459) #25	ap3s2 (ENSHCOG00000001465) #26	igf1rb (ENSHCOG00000001494) #27	LRRC28 (ENSHCOG00000001509) #28	SNAP25 (ENSHCOG00000001519) #29	COX5A (ENSHCOG00000001525) #30	ENSHCOG00000001532 #8	ENSHCOG00000001544 #7	KIF13B (ENSHCOG00000001559) #14	HMBOX1 (ENSHCOG00000001578) #13	HMBOX1 (ENSHCOG00000001589) #13	GLO1 (ENSHCOG00000001600) #10	eprs1 (ENSHCOG00000001640) #11	TDP1 (ENSHCOG00000001664) #12
Pinecone sodierfish	MODERN SPECIES	17	ENSMMDG00005002828	zdhhc7 (ENSMMDG00005002851)	RGS9BP (ENSMMDG00005002900)	nudt19 (ENSMMDG00005002903)	SLC7A9 (ENSMMDG00005002915)	PDPR (ENSMMDG00005003044) #16	mrps11 (ENSMMDG00005003796) #17	mrpl46 (ENSMMDG00005003798) #18	ENSMMDG00005003799	NTRK3 (ENSMMDG00005003805) #19	ENSMMDG00005003808 #20	ENSMMDG00005003815 #20	ENSMMDG00005003820 #20	ENSMMDG00005003827 #20	sv2ba (ENSMMDG00005003854) #21	mespba (ENSMMDG00005004019) #22	mespaa (ENSMMDG00005004023) #23	ANPEP (ENSMMDG00005004100) #24	ANPEP (ENSMMDG00005005190) #25	ap3s2 (ENSMMDG00005005197) #26	igf1rb (ENSMMDG00005005409) #27	LRRC28 (ENSMMDG00005014931) #28	SNAP25 (ENSMMDG00005014934) #29	ENSMMDG00005014935 #30	fam219b (ENSMMDG00005014937) #8	ENSMMDG00005014938 #7	ENSMMDG00005014943	ENSMMDG00005014945	cyp1a (ENSMMDG00005014947)	CSK (ENSMMDG00005014956)	cplx3a (ENSMMDG00005015444)
Cod	MODERN SPECIES	5	zgc:113276 (ENSGMOG00000008245)	ENSGMOG00000027085	ENSGMOG00000033168	ace2 (ENSGMOG00000008237)	ENSGMOG00000008230	ENSGMOG00000008222	cdkl5 (ENSGMOG00000008216)	ENSGMOG00000008214	ppef1 (ENSGMOG00000008211)	PHKA2 (ENSGMOG00000008203)	ENSGMOG00000015297	ENSGMOG00000007572	ENSGMOG00000004099 #20	ENSGMOG00000025824 #20	ENSGMOG00000027518 #21	mespba (ENSGMOG00000022758) #22	mespab (ENSGMOG00000034929) #23	ENSGMOG00000000197 #24	ENSGMOG00000026325 #25	ENSGMOG00000024300 #26	igf1rb (ENSGMOG00000000181) #27	ENSGMOG00000000175 #28	ENSGMOG00000024090	ENSGMOG00000018626	ENSGMOG00000014531 #36	ENSGMOG00000000886 #35	ENSGMOG00000000879 #9	zgc:165481 (ENSGMOG00000031211)	cep89 (ENSGMOG00000034662)	rhpn2 (ENSGMOG00000013243)	ENSGMOG00000025742
Protacanthopterygii	ANCESTRAL SPECIES	160	ENSGT00940000154870.D.a.b	ENSGT00390000009995	ENSGT01050000244841.A.a.b.qb.a #9	ENSGT01080000257410.A.f.l #35	ENSGT00940000157540.B #36	ENSGT00940000156291.e	ENSGT00940000156205.g	ENSGT00940000157771 #28	ENSGT00940000156682.e.a #27	ENSGT00970000193421.C.b #26	ENSGT00940000154876.a.a.a.a #25	ENSGT00940000154876.a.a.a.b #24	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.a ##21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.b.b ##25	ENSGT00940000154876.a.b.a ##25	ENSGT00940000153377.B
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	578															ENSGT00950000182940.b.a.a.g.a.d ##21	ENSGT00530000063712.a.a.o.b.e #22	ENSGT00530000063712.a.a.o.a.h #23	ENSGT00940000154876.a.a.b ##25	ENSGT00940000170837.a	ENSGT00940000156574.C.o.b	ENSGT00390000009899.a.d.m	ENSGT00390000009663.k	ENSGT00940000165046.a.e	ENSGT00940000158636.k.b	ENSGT00940000168978	ENSGT01000000220683	ENSGT00940000158792.l	ENSGT00530000063868.b.j.a.a	ENSGT01030000234621.E	ENSGT00390000013052.n	ENSGT00810000125439.B.c.b.c.b
Salmoninae_a	ANCESTRAL SPECIES	1	ENSGT00390000004596.d	ENSGT00940000157499.h	ENSGT00940000160052.j	ENSGT00550000074924.b	ENSGT00940000156978.lb	ENSGT00940000155581.B.c.b	ENSGT00950000183052.b.c.b.a.e.b.b	ENSGT00940000158707.a.b.n	ENSGT00520000055637.A.b.x	ENSGT00940000154158.a	ENSGT00390000005224.p	ENSGT00940000155645.j.f ##19	ENSGT00950000182983.B.b.e	ENSGT00940000154146.b.a.e.b #20	ENSGT00950000182940.b.a.a.g.a.d ##21	ENSGT00530000063712.a.a.o.b.e #22	ENSGT00530000063712.a.a.o.a.h #23	ENSGT00940000153377.B.b	ENSGT00940000156574.C.o.b	ENSGT00390000009899.a.d.m	ENSGT00390000009663.k	ENSGT00940000165046.a.e	ENSGT00940000158636.k.b	ENSGT00940000168978	ENSGT01000000220683	ENSGT00940000158792.l	ENSGT00530000063868.b.j.a.a	ENSGT01030000234621.E	ENSGT00390000013052.n	ENSGT00810000125439.B.c.b.c.b	ENSGT00940000156523.b.c.d
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00390000004596.d	ENSGT00940000157499.h	ENSGT00940000160052.j	ENSGT00550000074924.b	ENSGT00940000156978.lb	ENSGT00940000155581.B.c.b	ENSGT00950000183052.b.c.b.a.e.b.b	ENSGT00940000158707.a.b.n	ENSGT00520000055637.A.b.x	ENSGT00940000154158.a	ENSGT00390000005224.p	ENSGT00940000155645.j.f ##19	ENSGT00950000182983.B.b.e	ENSGT00940000154146.b.a.e.b #20	ENSGT00950000182940.b.a.a.g.a.d ##21	ENSGT00530000063712.a.a.o.b.e #22	ENSGT00530000063712.a.a.o.a.h #23	ENSGT00940000153377.B.b	ENSGT00940000156574.C.o.b	ENSGT00390000009899.a.d.m	ENSGT00390000009663.k	ENSGT00940000165046.a.e	ENSGT00940000158636.k.b	ENSGT00940000168978	ENSGT01000000220683	ENSGT00530000063868.b.j.a.a	ENSGT01100000263537.b.a.b.f.a.a	ENSGT00390000013052.n	ENSGT00810000125439.B.c.b.c.b	ENSGT00940000156523.b.c.d	ENSGT00940000159142.v
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00390000004596.d	ENSGT00940000157499.h	ENSGT00940000160052.j	ENSGT00550000074924.b	ENSGT00940000156978.lb	ENSGT00940000155581.B.c.b	ENSGT01030000234576.D.a.b.a.a.a.a.b.a	ENSGT00940000158707.a.b.n	ENSGT00520000055637.A.b.x	ENSGT00940000154158.a	ENSGT00390000005224.p	ENSGT00940000155645.j.f ##19	ENSGT00950000182983.B.b.e	ENSGT00940000154146.b.a.e.b #20	ENSGT00950000182940.b.a.a.g.a.d ##21	ENSGT00530000063712.a.a.o.b.e #22	ENSGT00530000063712.a.a.o.a.h #23	ENSGT00940000153377.B.b	ENSGT00940000156574.C.o.b	ENSGT00390000009899.a.d.m	ENSGT00390000009663.k	ENSGT00940000165046.a.e	ENSGT00940000158636.k.b	ENSGT00940000168978	ENSGT01000000220683	ENSGT00530000063868.b.j.a.a	ENSGT01100000263537.b.a.b.f.a.a	ENSGT00390000013052.n	ENSGT00810000125439.B.c.b.c.b	ENSGT00940000156523.b.c.d	ENSGT00940000159142.v
Chinook salmon	MODERN SPECIES	30	lcat (ENSOTSG00005029129)	uba2 (ENSOTSG00005028666)	ca5a (ENSOTSG00005028654)	slc7a5 (ENSOTSG00005028652)	ENSOTSG00005028651	jph3b (ENSOTSG00005028650)	ENSOTSG00005044279	ENSOTSG00005044278	ENSOTSG00005044277	map1lc3b (ENSOTSG00005044275)	det1 (ENSOTSG00005044273)	ntrk3a (ENSOTSG00005044226) ##19	KLHL25 (ENSOTSG00005044225)	ENSOTSG00005044220 #20	ENSOTSG00005044206 ##21	ENSOTSG00005044205 #22	mespaa (ENSOTSG00005044204) #23	ENSOTSG00005044203	lrp5 (ENSOTSG00005039690)	ppp6r3 (ENSOTSG00005038577)	gal (ENSOTSG00005038559)	zgc:110339 (ENSOTSG00005038557)	ADAMTS20 (ENSOTSG00005038509)	ENSOTSG00005038496	ENSOTSG00005038494	twf1a (ENSOTSG00005038493)	TMEM117 (ENSOTSG00005038492)	NELL2 (ENSOTSG00005034120)	ENSOTSG00005034048	bsg (ENSOTSG00005034047)	RNF126 (ENSOTSG00005034046)
Coho salmon	MODERN SPECIES	24	slc7a5 (ENSOKIG00005031421)	ENSOKIG00005031398	ENSOKIG00005031390	jph3b (ENSOKIG00005031375)	ENSOKIG00005031347	map1lc3b (ENSOKIG00005031279)	det1 (ENSOKIG00005031237)	ENSOKIG00005031228	ENSOKIG00005031224	ntrk3a (ENSOKIG00005031153) ##19	ENSOKIG00005031134	ENSOKIG00005031068	KLHL25 (ENSOKIG00005031064)	ENSOKIG00005030968 #20	ENSOKIG00005030168 ##21	ENSOKIG00005030082 #22	mespaa (ENSOKIG00005030065) #23	ENSOKIG00005030040	lrp5 (ENSOKIG00005029138)	ppp6r3 (ENSOKIG00005028858)	gal (ENSOKIG00005028823)	zgc:110339 (ENSOKIG00005028813)	ADAMTS20 (ENSOKIG00005028392)	ENSOKIG00005028343	ENSOKIG00005028327	twf1a (ENSOKIG00005028249)	ENSOKIG00005028235	TMEM117 (ENSOKIG00005028197)	ENSOKIG00005028192	NELL2 (ENSOKIG00005026000)	ENSOKIG00005025901
Salmo	ANCESTRAL SPECIES	9	ENSGT00990000213786	ENSGT00940000157499.h	ENSGT00940000160052.j	ENSGT00550000074924.b	ENSGT00940000156978.lb	ENSGT00940000155581.B.c.b	ENSGT00950000183052.b.c.b.a.e.b.b	ENSGT00940000158707.a.b.n	ENSGT00520000055637.A.b.x	ENSGT00940000154158.a	ENSGT00390000005224.p	ENSGT00940000155645.j.f ##19	ENSGT00950000182983.B.b.e	ENSGT00940000154146.b.a.e.b #20	ENSGT00950000182940.b.a.a.g.a.d ##21	ENSGT00530000063712.a.a.o.b.e #22	ENSGT00530000063712.a.a.o.a.h #23	ENSGT00940000153377.B.b	ENSGT00940000156574.C.o.b	ENSGT00390000009899.a.d.m	ENSGT00390000009663.k	ENSGT00940000165046.a.e	ENSGT00940000158636.k.b	ENSGT00940000158792.l	ENSGT00530000063868.b.j.a.a	ENSGT01030000234621.E	ENSGT00390000013052.n	ENSGT00810000125439.B.c.b.c.b	ENSGT00940000156523.b.c.d	ENSGT00940000159142.v	ENSGT00940000157113.c.a
Atlantic salmon	MODERN SPECIES	7	sae2 (ENSSSAG00000047304)	ENSSSAG00000051789	slc7a5 (ENSSSAG00000051886)	ENSSSAG00000054559	jph3b (ENSSSAG00000054563)	ZCCHC14 (ENSSSAG00000054569)	map1lc3b (ENSSSAG00000054579)	DET1 (ENSSSAG00000054657)	ntrk3a (ENSSSAG00000054707) ##19	ENSSSAG00000102723	ENSSSAG00000112925	ENSSSAG00000056667	ENSSSAG00000056674 #20	ENSSSAG00000114902 #20	ENSSSAG00000056712 ##21	ENSSSAG00000056732 #22	ENSSSAG00000056736 #23	ENSSSAG00000056741	lrp5 (ENSSSAG00000056819)	ppp6r3 (ENSSSAG00000059393)	zgc:110339 (ENSSSAG00000063431)	ADAMTS20 (ENSSSAG00000063455)	ENSSSAG00000107042	irak4 (ENSSSAG00000063712)	twf1 (ENSSSAG00000063743)	ENSSSAG00000088184	TMEM117 (ENSSSAG00000062151)	NELL2 (ENSSSAG00000063844)	ENSSSAG00000064939	bsg (ENSSSAG00000094020)	ENSSSAG00000065197
River trout	MODERN SPECIES	8	uba2 (ENSSTUG00000005984)	ca5a (ENSSTUG00000005945)	slc7a5 (ENSSTUG00000005369)	ENSSTUG00000005341	jph3b (ENSSTUG00000005325)	ENSSTUG00000005309	map1lc3b (ENSSTUG00000005247)	det1 (ENSSTUG00000005229)	ntrk3a (ENSSTUG00000005163) ##19	ENSSTUG00000005151	KLHL25 (ENSSTUG00000005145)	ENSSTUG00000005140	ENSSTUG00000005058 #20	ENSSTUG00000005028 #20	ENSSTUG00000004676 ##21	ENSSTUG00000004647 #22	mespaa (ENSSTUG00000004640) #23	ENSSTUG00000004627	lrp5 (ENSSTUG00000004468)	ppp6r3 (ENSSTUG00000003338)	gal (ENSSTUG00000003271)	zgc:110339 (ENSSTUG00000003255)	ADAMTS20 (ENSSTUG00000002633)	ENSSTUG00000002563	IRAK4 (ENSSTUG00000002398)	twf1a (ENSSTUG00000002299)	ENSSTUG00000012720	TMEM117 (ENSSTUG00000012667)	NELL2 (ENSSTUG00000011734)	ENSSTUG00000011607	bsg (ENSSTUG00000011562)
Huchen	MODERN SPECIES	386															ENSHHUG00000042235 ##21	ENSHHUG00000042225 #22	mespaa (ENSHHUG00000042221) #23	ENSHHUG00000042187 ##25	ENSHHUG00000042185	lrp5 (ENSHHUG00000041905)	ppp6r3 (ENSHHUG00000041816)	gal (ENSHHUG00000041790)	zgc:110339 (ENSHHUG00000041786)	ADAMTS20 (ENSHHUG00000041523)	ENSHHUG00000041514	ENSHHUG00000041506	twf1a (ENSHHUG00000041442)	TMEM117 (ENSHHUG00000041433)	NELL2 (ENSHHUG00000041075)
Salmoninae	ANCESTRAL SPECIES	1531															ENSGT00950000182940.b.a.a.g.a.c ##21	ENSGT00530000063712.a.a.o.b.f #22
Salmoninae_a	ANCESTRAL SPECIES	13	ENSGT00940000160052.i.a	ENSGT00390000004913	ENSGT00550000074924.a	ENSGT00940000156978.mb	ENSGT00940000155581.B.c.a	ENSGT00390000003374	ENSGT00940000158707.a.b.m	ENSGT00520000055637.A.b.w	ENSGT00940000154158.b	ENSGT00390000005224.o	ENSGT00940000155645.j.e ##19	ENSGT00940000160936	ENSGT00950000182983.B.b.f	ENSGT00940000154146.b.a.e.a #20	ENSGT00950000182940.b.a.a.g.a.c ##21	ENSGT00530000063712.a.a.o.b.f #22	ENSGT00530000063712.a.a.o.a.g #23	ENSGT00940000154876.a.b.b ##25	ENSGT00940000154876.a.b.a ##25	ENSGT00940000153377.B.a	ENSGT00940000156574.C.o.a	ENSGT00390000009899.a.d.n	ENSGT00940000167440	ENSGT00390000009663.l	ENSGT00940000165046.a.f	ENSGT00940000161379	ENSGT00940000158636.k.a	ENSGT00940000158792.k	ENSGT00530000063868.b.j.a.b	ENSGT01100000263537.b.a.b.f	ENSGT00390000013052.m
Oncorhynchus	ANCESTRAL SPECIES	10	ENSGT00940000160052.i.a	ENSGT00390000004913	ENSGT00940000164507.b	ENSGT00940000156978.mb	ENSGT00940000155581.B.c.a	ENSGT00390000003374	ENSGT00940000158707.a.b.m	ENSGT00520000055637.A.b.w	ENSGT00940000154158.b	ENSGT00390000005224.o	ENSGT00940000155645.j.e ##19	ENSGT00940000160936	ENSGT00950000182983.B.b.f	ENSGT00940000154146.b.a.e.a #20	ENSGT00950000182940.b.a.a.g.a.c ##21	ENSGT00530000063712.a.a.o.b.f #22	ENSGT00530000063712.a.a.o.a.g #23	ENSGT00940000154876.a.b.b ##25	ENSGT00940000154876.a.b.a ##25	ENSGT00940000153377.B.a	ENSGT00940000156574.C.o.a	ENSGT00390000009899.a.d.n	ENSGT00940000167440	ENSGT00390000009663.l	ENSGT00940000165046.a.f	ENSGT00940000161379	ENSGT00940000158636.k.a	ENSGT00940000158792.k	ENSGT00530000063868.b.j.a.b	ENSGT01100000263537.b.a.b.f.a.b	ENSGT00390000013052.m
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00390000004913	ENSGT00940000164507.b	ENSGT00940000156978.mb	ENSGT00940000155581.B.c.a	ENSGT00940000155581.C	ENSGT00390000003374	ENSGT00940000158707.a.b.m	ENSGT00520000055637.A.b.w	ENSGT00940000154158.b	ENSGT00390000005224.o	ENSGT00940000155645.j.e ##19	ENSGT00940000160936	ENSGT00950000182983.B.b.f	ENSGT00940000154146.b.a.e.a #20	ENSGT00950000182940.b.a.a.g.a.c ##21	ENSGT00530000063712.a.a.o.b.f #22	ENSGT00530000063712.a.a.o.a.g #23	ENSGT00940000154876.a.b.b ##25	ENSGT00940000154876.a.b.a ##25	ENSGT00940000153377.B.a	ENSGT00940000156574.C.o.a	ENSGT00390000009899.a.d.n	ENSGT00940000167440	ENSGT00390000009663.l	ENSGT00940000163363	ENSGT00940000161379	ENSGT00940000158636.k.a	ENSGT01010000229777	ENSGT00940000158792.k	ENSGT00530000063868.b.j.a.b	ENSGT01100000263537.b.a.b.f.a.b
Coho salmon	MODERN SPECIES	14	DRC7 (ENSOKIG00005046879)	ENSOKIG00005046422	ca5a (ENSOKIG00005046377)	SLC7A5 (ENSOKIG00005045727)	klhdc4 (ENSOKIG00005045647)	jph3b (ENSOKIG00005045638)	ZCCHC14 (ENSOKIG00005045625)	map1lc3b (ENSOKIG00005045603)	det1 (ENSOKIG00005045588)	ENSOKIG00005045583	ntrk3a (ENSOKIG00005045529) ##19	AGBL1 (ENSOKIG00005045512)	KLHL25 (ENSOKIG00005045508)	ENSOKIG00005045482 #20	ENSOKIG00005045412 ##21	ENSOKIG00005045387 #22	ENSOKIG00005045363 #23	ANPEP (ENSOKIG00005045301) ##25	anpepb.1 (ENSOKIG00005044079) ##25	ENSOKIG00005043979	lrp5 (ENSOKIG00005038566)	ppp6r3 (ENSOKIG00005037193)	ENSOKIG00005037107	gal (ENSOKIG00005037096)	ENSOKIG00005037033	ENSOKIG00005036974	ADAMTS20 (ENSOKIG00005036052)	ENSOKIG00005035940	irak4 (ENSOKIG00005035877)	twf1a (ENSOKIG00005035862)	ENSOKIG00005035842
Chinook salmon	MODERN SPECIES	10	ENSOTSG00005033428	ca5a (ENSOTSG00005033420)	slc7a5 (ENSOTSG00005031711)	klhdc4 (ENSOTSG00005031697)	jph3b (ENSOTSG00005031694)	ENSOTSG00005031692	ENSOTSG00005031690	map1lc3b (ENSOTSG00005031689)	det1 (ENSOTSG00005031688)	ntrk3a (ENSOTSG00005031685) ##19	AGBL1 (ENSOTSG00005031683)	KLHL25 (ENSOTSG00005031682)	ENSOTSG00005031679 #20	ENSOTSG00005031678 #20	SV2B (ENSOTSG00005031674) ##21	ENSOTSG00005031671 #22	ENSOTSG00005031670 #23	ENSOTSG00005031404 ##25	anpepb.1 (ENSOTSG00005030586) ##25	ENSOTSG00005030572	lrp5 (ENSOTSG00005027040)	ppp6r3 (ENSOTSG00005026234)	ENSOTSG00005026223	gal (ENSOTSG00005026218)	ENSOTSG00005026216	ENSOTSG00005026214	ADAMTS20 (ENSOTSG00005025519)	ENSOTSG00005025493	irak4 (ENSOTSG00005025491)	twf1a (ENSOTSG00005025490)	ENSOTSG00005025489
Rainbow trout	MODERN SPECIES	11	slc7a5 (ENSOMYG00000040066)	klhdc4 (ENSOMYG00000039831)	jph3b (ENSOMYG00000039765)	ENSOMYG00000039751	map1lc3b (ENSOMYG00000068549)	det1 (ENSOMYG00000039690)	ENSOMYG00000063121	ntrk3a (ENSOMYG00000039502) ##19	ENSOMYG00000039327	ENSOMYG00000052587	KLHL25 (ENSOMYG00000039245)	ENSOMYG00000072284 #20	ENSOMYG00000039237 #20	ENSOMYG00000074182	ENSOMYG00000039201 ##21	mespbb (ENSOMYG00000039175) #22	ENSOMYG00000039168 #23	ENSOMYG00000038037 ##25	anpepb.1 (ENSOMYG00000037287) ##25	ENSOMYG00000037142	lrp5 (ENSOMYG00000033413)	ppp6r3 (ENSOMYG00000031697)	ENSOMYG00000031358	ENSOMYG00000070518	gal (ENSOMYG00000031338)	zgc:110339 (ENSOMYG00000031331)	ENSOMYG00000031321	ADAMTS20 (ENSOMYG00000031161)	irak4 (ENSOMYG00000030965)	twf1a (ENSOMYG00000030886)	ENSOMYG00000030862
Salmo	ANCESTRAL SPECIES	36	ENSGT00940000160052.i.a	ENSGT00390000004913	ENSGT00550000074924.a	ENSGT00940000156978.mb	ENSGT00940000155581.B.c.a	ENSGT00390000003374	ENSGT00940000158707.a.b.m	ENSGT00520000055637.A.b.w	ENSGT00940000154158.b	ENSGT00390000005224.o	ENSGT00940000155645.j.e ##19	ENSGT00940000160936	ENSGT00950000182983.B.b.f	ENSGT00940000154146.b.a.e.a #20	ENSGT00950000182940.b.a.a.g.a.c ##21	ENSGT00530000063712.a.a.o.b.f #22	ENSGT00530000063712.a.a.o.a.g #23	ENSGT00940000154876.a.b.b ##25	ENSGT00940000154876.a.b.a ##25	ENSGT00940000153377.B.a	ENSGT00940000156574.C.o.a	ENSGT00390000009899.a.d.n	ENSGT00940000167440	ENSGT00390000009663.l	ENSGT00940000165046.a.f	ENSGT00940000161379	ENSGT00940000158636.k.a	ENSGT00940000158792.k	ENSGT00530000063868.b.j.a.b	ENSGT00390000013052.m	ENSGT00810000125439.B.c.b.c.a
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000072831	ENSSSAG00000106121	ca5a (ENSSSAG00000093356)	slc7a5 (ENSSSAG00000071975)	klhdc4 (ENSSSAG00000071789)	jph3 (ENSSSAG00000071780)	ENSSSAG00000083835	map1lc3b (ENSSSAG00000083038)	det1 (ENSSSAG00000071755)	ENSSSAG00000086249	ntrk3a (ENSSSAG00000071080) ##19	ENSSSAG00000070971	KLHL25 (ENSSSAG00000070961)	ENSSSAG00000102068 #20	ENSSSAG00000070055 ##21	ENSSSAG00000070036 #22	ENSSSAG00000070035 #23	ENSSSAG00000109796 ##25	ENSSSAG00000091550	anpepb.1 (ENSSSAG00000064984) ##25	ENSSSAG00000120845	lrp5 (ENSSSAG00000064425)	saps3 (ENSSSAG00000063838)	ENSSSAG00000063794	gal (ENSSSAG00000090276)	zgc:110339 (ENSSSAG00000063764)	ENSSSAG00000063755	ENSSSAG00000098032	ENSSSAG00000093384	ADAMTS20 (ENSSSAG00000062769)	irak4 (ENSSSAG00000062519)
River trout	MODERN SPECIES	37	uba2 (ENSSTUG00000013311)	ca5a (ENSSTUG00000013529)	slc7a5 (ENSSTUG00000013556)	klhdc4 (ENSSTUG00000014390)	jph3b (ENSSTUG00000014436)	ZCCHC14 (ENSSTUG00000014465)	map1lc3b (ENSSTUG00000014471)	det1 (ENSSTUG00000014494)	ENSSTUG00000014510	ntrk3a (ENSSTUG00000014517) ##19	ENSSTUG00000014724	AGBL1 (ENSSTUG00000014733)	KLHL25 (ENSSTUG00000014802)	ENSSTUG00000014808 #20	SV2B (ENSSTUG00000014879) ##21	ENSSTUG00000014987 #22	ENSSTUG00000015001 #23	anpepb.1 (ENSSTUG00000015042) ##25	ENSSTUG00000015936	lrp5 (ENSSTUG00000016009)	ppp6r3 (ENSSTUG00000018786)	ENSSTUG00000019388	gal (ENSSTUG00000019424)	zgc:110339 (ENSSTUG00000019432)	ENSSTUG00000019456	ADAMTS20 (ENSSTUG00000019540)	ENSSTUG00000020586	irak4 (ENSSTUG00000020599)	twf1a (ENSSTUG00000020713)	TMEM117 (ENSSTUG00000020751)	NELL2 (ENSSTUG00000020827)
Huchen	MODERN SPECIES	7228															SV2B (ENSHHUG00000016626) ##21	ENSHHUG00000016619 #22
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	18	DRC7 (ENSELUG00000010885)	uba2 (ENSELUG00000010858)	ca5a (ENSELUG00000032440)	slc7a5 (ENSELUG00000010773)	klhdc4 (ENSELUG00000010746)	jph3b (ENSELUG00000010714)	ZCCHC14 (ENSELUG00000010668)	map1lc3b (ENSELUG00000010626)	det1 (ENSELUG00000001233)	ntrk3a (ENSELUG00000010573) ##19	AGBL1 (ENSELUG00000010501)	KLHL25 (ENSELUG00000010409)	ENSELUG00000010364 #20	ENSELUG00000031032 #20	SV2B (ENSELUG00000010267) ##21	mespba (ENSELUG00000010218) #22	mespaa (ENSELUG00000033105) #23	ANPEP (ENSELUG00000001281) ##25	anpepb.1 (ENSELUG00000010173) ##25	ENSELUG00000025527	lrp5 (ENSELUG00000010119)	ppp6r3 (ENSELUG00000010007)	ENSELUG00000009910	gal (ENSELUG00000031732)	zgc:110339 (ENSELUG00000009774)	ENSELUG00000009746	ADAMTS20 (ENSELUG00000009675)	irak4 (ENSELUG00000009419)	twf1a (ENSELUG00000009405)	TMEM117 (ENSELUG00000009381)	ENSELUG00000029320
Northern pike	MODERN SPECIES	16	ENSELUG00000017549	ENSELUG00000017531	gnrhr2 (ENSELUG00000017507) #9	SLCO3A1 (ENSELUG00000000685) #35	ENSELUG00000017455 #37	ENSELUG00000017428 #36	ENSELUG00000017391	ENSELUG00000001388	ENSELUG00000017279 #28	ENSELUG00000026023	igf1rb (ENSELUG00000017203) #27	ap3s2 (ENSELUG00000017177) #26	ANPEP (ENSELUG00000017096) #25	ANPEP (ENSELUG00000031379) #24	sv2ba (ENSELUG00000016884) #21	ENSELUG00000032446 #22	ENSELUG00000016769 ##20	NTRK3 (ENSELUG00000016689) #19	ENSELUG00000016487	mrpl46 (ENSELUG00000016469) #18	mrps11 (ENSELUG00000016452) #17	PDPR (ENSELUG00000016394) #16	glg1b (ENSELUG00000016335)	WDR59 (ENSELUG00000016242)	NOB1 (ENSELUG00000016199)	cog8 (ENSELUG00000016162)	nip7 (ENSELUG00000016139)	ENSELUG00000016115	zdhhc7 (ENSELUG00000028191)	RGS9BP (ENSELUG00000016085)	CELA1 (ENSELUG00000016032)
Otomorpha	ANCESTRAL SPECIES	6	ENSGT00940000164368.A	ENSGT00940000165692	ENSGT00940000165521.b	ENSGT00390000003062	ENSGT00950000182957.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a	ENSGT00940000177011	ENSGT00940000159749	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000164605.e	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00940000156205.g	ENSGT00940000156291.e	ENSGT01010000222360.D.b	ENSGT00940000155391.a.b.b	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000007681.b.a.a	ENSGT00530000063074.b.a	ENSGT00940000159533
Clupeiformes	ANCESTRAL SPECIES	64	ENSGT00950000183065.A	ENSGT00940000154489.A.c	ENSGT00940000155047.ac.a	ENSGT00940000163854.b	ENSGT00730000111210	ENSGT00940000156912.c.a	ENSGT00940000158805.a	ENSGT00940000159515.c.b	ENSGT00940000158300.f	ENSGT00390000011846	ENSGT00940000159749	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000164605.e	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25
Denticle herring	MODERN SPECIES	7	CGNL1 (ENSDCDG00000019195)	ENSDCDG00000019213	ENSDCDG00000019238	mns1 (ENSDCDG00000019253)	TPH1 (ENSDCDG00000019305)	kcnc1a (ENSDCDG00000020959)	cd81a (ENSDCDG00000020963)	PKP3 (ENSDCDG00000020969)	ANO9 (ENSDCDG00000020976)	tssc4 (ENSDCDG00000020982)	kif7 (ENSDCDG00000020994)	mrps11 (ENSDCDG00000021014) #17	mrpl46 (ENSDCDG00000021015) #18	NTRK3 (ENSDCDG00000021018) #19	sv2ba (ENSDCDG00000021060) #21	mespba (ENSDCDG00000021065) #22	mespaa (ENSDCDG00000021068) #23	ANPEP (ENSDCDG00000021077) #24	igf1rb (ENSDCDG00000021396) #27	heatr3 (ENSDCDG00000026323)	ankdd1a (ENSDCDG00000026335)	spg21 (ENSDCDG00000026337)	clpxa (ENSDCDG00000026341)	pdcd7 (ENSDCDG00000026391)	UBAP1L (ENSDCDG00000026393)	KBTBD13 (ENSDCDG00000026395)	rasl12 (ENSDCDG00000026396)	mtfmt (ENSDCDG00000026399)	lin7c (ENSDCDG00000026549)	bdnf (ENSDCDG00000022758)	KIF18A (ENSDCDG00000022759)
Atlantic herring	MODERN SPECIES	12	kcnc1a (ENSCHAG00000022454)	cd81a (ENSCHAG00000000536)	ENSCHAG00000000565	ENSCHAG00000001269	ENSCHAG00000003259	tssc4 (ENSCHAG00000003290)	kif7 (ENSCHAG00000003319)	ENSCHAG00000003796	mrps11 (ENSCHAG00000003809) #17	mrpl46 (ENSCHAG00000003817) #18	NTRK3 (ENSCHAG00000003845) #19	ENSCHAG00000004387	ENSCHAG00000004422 #20	ENSCHAG00000004473 #20	sv2ba (ENSCHAG00000004568) #21	mespba (ENSCHAG00000004927) #22	mespaa (ENSCHAG00000004956) #23	ENSCHAG00000005002	ANPEP (ENSCHAG00000005419) #24	ANPEP (ENSCHAG00000005920) #25	HSBP1 (ENSCHAG00000006439)	arl14ep (ENSCHAG00000006478)	ENSCHAG00000006484	KCNA4 (ENSCHAG00000006510)	lgr4 (ENSCHAG00000006519)	mettl15 (ENSCHAG00000006571)	KIF18A (ENSCHAG00000006597)	bdnf (ENSCHAG00000006667)	lin7c (ENSCHAG00000006687)	mybpc3 (ENSCHAG00000006886)	mtfmt (ENSCHAG00000009903)
Otophysi	DUPLICATION
Otophysi	DUPLICATION
Otophysi	ANCESTRAL SPECIES	72	ENSGT00390000008092.b.a.b	ENSGT00940000161629.a	ENSGT00940000160167	ENSGT00950000182902.b.a.d.b.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a.i	ENSGT00940000177011	ENSGT00940000159749	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b.a.a #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000164605.e	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00940000156205.g	ENSGT00940000156205.h	ENSGT00940000156291.f	ENSGT00940000156291.e	ENSGT01010000222360.D.b	ENSGT00940000155391.a.b.b	ENSGT00390000001443	ENSGT00550000075025	ENSGT00950000183093.B.b
Characiphysae	ANCESTRAL SPECIES	8	ENSGT00390000008092.b.a.b	ENSGT00940000160167	ENSGT00950000182902.b.a.d.b.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a.i	ENSGT00940000177011	ENSGT00940000159749	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b.a.a #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00940000156205.g	ENSGT00940000156291.e	ENSGT00390000007753.a	ENSGT00940000153986.b.a.u.b	ENSGT00940000156318.b.b	ENSGT00530000063405.a	ENSGT00390000011249	ENSGT00390000011698.c.a.b	ENSGT00940000160591.a.a	ENSGT00940000166218
Characiphysae_b	ANCESTRAL SPECIES	4	ENSGT00940000160167	ENSGT00950000182902.b.a.d.b.a	ENSGT00940000164526.a	ENSGT00940000164669	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a.i	ENSGT00940000159749	ENSGT00940000177011	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b.a.a #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00940000156205.g	ENSGT00940000156291.e	ENSGT00390000007753.a	ENSGT00940000153986.b.a.u.b	ENSGT00940000156318.b.b	ENSGT00530000063405.a	ENSGT00390000011249	ENSGT00390000011698.c.a.b	ENSGT00940000160591.a.a	ENSGT00940000166218
Characoidei	ANCESTRAL SPECIES	18	ENSGT00940000164669	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a.i.c	ENSGT00950000182844.b.b.b.a.a.i.d	ENSGT00940000159749	ENSGT00940000177011	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a.t #20	ENSGT00990000209097	ENSGT00940000154146.b.a.s #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b.a.a #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00940000156205.h	ENSGT00940000156291.f	ENSGT00940000156291.e	ENSGT00390000007753.a	ENSGT00940000153986.b.a.u.b	ENSGT00940000156318.b.b	ENSGT00530000063405.a	ENSGT00390000011249	ENSGT00390000011698.c.a.b	ENSGT00940000160591.a.a
Mexicana tetra	MODERN SPECIES	20	impact (ENSAMXG00000021560)	ing5a (ENSAMXG00000021559)	cep19 (ENSAMXG00000021558)	pigx (ENSAMXG00000021557)	pak2b (ENSAMXG00000021556)	si:dkey-10o6.2 (ENSAMXG00000021555)	rpp21 (ENSAMXG00000030709)	kif7 (ENSAMXG00000021552)	ENSAMXG00000037959	mrps11 (ENSAMXG00000021547) #17	mrpl46 (ENSAMXG00000030876) #18	NTRK3 (ENSAMXG00000039792) #19	si:dkey-172h23.2 (ENSAMXG00000021520) #20	ENSAMXG00000038003 #20	sv2ba (ENSAMXG00000021489) #21	mespba (ENSAMXG00000040981) #22	mespaa (ENSAMXG00000041487) #23	ANPEP (ENSAMXG00000021468) #24	ENSAMXG00000021464	ANPEP (ENSAMXG00000031216) #24	ANPEP (ENSAMXG00000021446) #25	igf1rb (ENSAMXG00000021415) #27	LRRC28 (ENSAMXG00000040593) #28	ENSAMXG00000029762	ENSAMXG00000021393	ENSAMXG00000021387	ero1b (ENSAMXG00000021371)	GPR137B (ENSAMXG00000021361)	NID1 (ENSAMXG00000021348)	tbce (ENSAMXG00000021338)	ENSAMXG00000040370
Red-bellied piranha	MODERN SPECIES	62	furina (ENSPNAG00000013317)	fes (ENSPNAG00000002715)	rhcga (ENSPNAG00000013369)	ENSPNAG00000005134	ENSPNAG00000013390	rhcga (ENSPNAG00000013417)	ENSPNAG00000002741	kif7 (ENSPNAG00000002750)	mrps11 (ENSPNAG00000002759) #17	mrpl46 (ENSPNAG00000013468) #18	NTRK3 (ENSPNAG00000007107) #19	ENSPNAG00000013536 ##20	ENSPNAG00000013542	ENSPNAG00000002819 #20	sv2ba (ENSPNAG00000013626) #21	mespba (ENSPNAG00000002870) #22	mespaa (ENSPNAG00000013677) #23	ANPEP (ENSPNAG00000014278) #24	ANPEP (ENSPNAG00000014622) #24	ANPEP (ENSPNAG00000014668) #25	igf1rb (ENSPNAG00000014746) #27	LRRC28 (ENSPNAG00000014781) #28	ENSPNAG00000014801	MCTP2 (ENSPNAG00000014920)	ENSPNAG00000014932
Channel catfish	MODERN SPECIES	1	abhd2a (ENSIPUG00000022936)	rlbp1 (ENSIPUG00000022926)	SLC39A2 (ENSIPUG00000022916)	ENSIPUG00000022897	furina (ENSIPUG00000022809)	V-FPS (ENSIPUG00000022771)	rhcga (ENSIPUG00000022758)	ENSIPUG00000022596	kif7 (ENSIPUG00000022517)	MRPS11 (ENSIPUG00000022494) #17	mrpl46 (ENSIPUG00000022487) #18	ntrk3 (ENSIPUG00000022403) #19	ENSIPUG00000022328 #20	ENSIPUG00000022313 #20	Sv2b (ENSIPUG00000022299) #21	mespba (ENSIPUG00000022294) #22	mespaa (ENSIPUG00000022281) #23	ANPEP (ENSIPUG00000022254) #25	ENSIPUG00000022242	Igf1r (ENSIPUG00000022197) #27	lrrc28 (ENSIPUG00000022158) #28	ENSIPUG00000022132	ENSIPUG00000022109	ENSIPUG00000022099	ero1b (ENSIPUG00000022054)	gpr137b (ENSIPUG00000022038)	nid1 (ENSIPUG00000022017)	tbce (ENSIPUG00000021983)	rbm34 (ENSIPUG00000021952)	tomm20b (ENSIPUG00000021935)	ENSIPUG00000021929
Cyprinoidei	ANCESTRAL SPECIES	14	ENSGT00940000161629.a	ENSGT00940000160167	ENSGT00950000182902.b.a.d.b.a	ENSGT00940000164526.a	ENSGT00940000164669.k	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a.i	ENSGT00940000159749	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b.a.a #22	ENSGT00530000063712.a.a.o.b.a.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00940000156205.h.k.a	ENSGT00940000156291.e	ENSGT01010000222360.D.b	ENSGT00940000155391.a.b.b	ENSGT00390000001443	ENSGT00550000075025	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.a.b	ENSGT00950000183093.B.b	ENSGT00940000155663.f.a
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	161	ENSGT00940000161629.a	ENSGT00940000160167.a	ENSGT00950000182902.b.a.d.b.a.d	ENSGT00940000164526.a.d	ENSGT00940000164669.k.b	ENSGT00950000182957.a.a.b.fc.a	ENSGT00940000157220.a.d	ENSGT00940000158881.n	ENSGT00950000182844.b.b.b.a.a.i.e	ENSGT00940000159749.d	ENSGT00390000016068.a #17	ENSGT00390000015400.i #18	ENSGT00940000155645.i.b.b #19	ENSGT00940000154146.b.a.x.a #20	ENSGT00950000182940.b.a.a.g.b.a #21	ENSGT00530000063712.a.a.o.b.a.a.a.a #22	ENSGT00530000063712.a.a.o.a.k.b #23	ENSGT00940000154876.a.a.a.b.e #24	ENSGT00940000154876.a.a.a.a.a #25	ENSGT00940000156682.e.a.b #27	ENSGT00940000157771.s #28	ENSGT00940000156205.h.k.a.a	ENSGT00940000156291.e.b	ENSGT01010000222360.D.b.e	ENSGT00940000155391.a.b.b.b	ENSGT00390000001443.b	ENSGT00550000075025.c	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.a.a.a.b	ENSGT00390000007681.b.a.a.m.a.b.b
Goldfish	MODERN SPECIES	25	ENSCARG00000013379	KBTBD13 (ENSCARG00000013381)	rasl12 (ENSCARG00000013386)	abhd2a (ENSCARG00000013398)	slc39a1 (ENSCARG00000013451)	ENSCARG00000013456	furina (ENSCARG00000013542)	fes (ENSCARG00000014213)	rhcga (ENSCARG00000014595)	kif7 (ENSCARG00000014768)	mrps11 (ENSCARG00000014953) #17	mrpl46 (ENSCARG00000014990) #18	NTRK3 (ENSCARG00000015022) #19	ENSCARG00000015128 #20	sv2ba (ENSCARG00000015152) #21	mespba (ENSCARG00000015180) #22	mespaa (ENSCARG00000015187) #23	ENSCARG00000015208 #24	igf1rb (ENSCARG00000015482) #27	LRRC28 (ENSCARG00000005854) #28	ENSCARG00000005874	ENSCARG00000005902	RCN1 (ENSCARG00000006002)	pax6b (ENSCARG00000006174)	elp4 (ENSCARG00000008441)	immp1l (ENSCARG00000008452)	ENSCARG00000008468	CEMIP (ENSCARG00000008591)	mesd (ENSCARG00000011791)	TLNRD1 (ENSCARG00000011803)	asb7 (ENSCARG00000011809)
Cyprininae_a	ANCESTRAL SPECIES	248	ENSGT00940000160167.a	ENSGT00950000182902.b.a.d.b.a.d	ENSGT00940000164526.a.d	ENSGT00940000164669.k.b	ENSGT00950000182957.a.a.b.fc.a	ENSGT00940000157220.a.d	ENSGT00940000158881.n	ENSGT00950000182844.b.b.b.a.a.i.e	ENSGT00940000159749.d	ENSGT00390000016068.a #17	ENSGT00390000015400.i #18	ENSGT00960000189817	ENSGT00940000155645.i.b.b #19	ENSGT00940000154146.b.a.x.a #20	ENSGT00950000182940.b.a.a.g.b.a #21	ENSGT00530000063712.a.a.o.b.a.a.a.a #22	ENSGT00530000063712.a.a.o.a.k.b #23	ENSGT00940000154876.a.a.a.b.e #24	ENSGT00940000154876.a.a.a.a.a #25	ENSGT00940000156682.e.a.b #27	ENSGT00940000157771.s #28	ENSGT00940000156205.h.k.a.a	ENSGT00940000156291.e.b	ENSGT01010000222360.D.b.e	ENSGT00940000155391.a.b.b.b	ENSGT00390000001443.b	ENSGT00550000075025.c	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.a.b
Common carp reference	MODERN SPECIES	6	rasl12 (ENSCCRG00000057326)	abhd2a (ENSCCRG00000051285)	rlbp1a (ENSCCRG00000051310)	slc39a1 (ENSCCRG00000080062)	ENSCCRG00000040453	ENSCCRG00000067333	furina (ENSCCRG00000039242)	fes (ENSCCRG00000010640)	rhcga (ENSCCRG00000017377)	kif7 (ENSCCRG00000017349)	mrps11 (ENSCCRG00000017355) #17	mrpl46 (ENSCCRG00000067215) #18	NTRK3 (ENSCCRG00000005300) #19	si:dkey-172h23.2 (ENSCCRG00000021605) #20	sv2ba (ENSCCRG00000021601) #21	mespba (ENSCCRG00000021596) #22	mespaa (ENSCCRG00000021594) #23	ENSCCRG00000061982 #24	ENSCCRG00000045382 #25	igf1rb (ENSCCRG00000002287) #27	ENSCCRG00000079595 #28	ENSCCRG00000021133	ENSCCRG00000021147	RCN1 (ENSCCRG00000077682)	pax6b (ENSCCRG00000045912)	elp4 (ENSCCRG00000068491)	immp1l (ENSCCRG00000024529)	ENSCCRG00000065816	mpped2a (ENSCCRG00000007213)	zdhhc13 (ENSCCRG00000079798)	csrp3 (ENSCCRG00000065216)
Cyprininae	ANCESTRAL SPECIES	228	ENSGT00390000017625.k.d	ENSGT00940000160167.b	ENSGT00950000182902.b.a.d.b.a.c	ENSGT00940000164526.a.c	ENSGT00940000164669.k.a	ENSGT00950000182957.a.a.b.fc.b	ENSGT00940000157220.a.c	ENSGT00940000158881.m	ENSGT00950000182844.b.b.b.a.a.i.f	ENSGT00940000159749.c	ENSGT00390000016068.b #17	ENSGT00390000015400.j #18	ENSGT00940000155645.i.b.a #19	ENSGT00940000154146.b.a.x.b #20	ENSGT00950000182940.b.a.a.g.b.b #21	ENSGT00530000063712.a.a.o.b.a.a.a.b #22	ENSGT00530000063712.a.a.o.a.k.a #23	ENSGT00940000154876.a.a.a.b.f #24	ENSGT00940000154876.a.a.a.a.b #25	ENSGT00940000156682.e.a.a #27	ENSGT00940000157771.t #28	ENSGT00940000156205.h.k.a.b	ENSGT00940000156205.h.k.b.a	ENSGT00940000156291.e.a	ENSGT01010000222360.D.b.f	ENSGT00940000155391.a.b.b.a	ENSGT00390000001443.a	ENSGT00550000075025.d	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.a.a.a.a	ENSGT00390000007681.b.a.a.m.b	ENSGT00530000063074.b.a.j
Cyprininae_a	ANCESTRAL SPECIES	185	ENSGT00390000017625.k.d	ENSGT00940000160167.b	ENSGT00950000182902.b.a.d.b.a.c	ENSGT00940000164526.a.c	ENSGT00940000164669.k.a	ENSGT00950000182957.a.a.b.fc.b	ENSGT00940000157220.a.c	ENSGT00940000158881.m	ENSGT00950000182844.b.b.b.a.a.i.f	ENSGT00940000159749.c	ENSGT00390000016068.b.a #17	ENSGT00390000015400.j #18	ENSGT00940000155645.i.b.a #19	ENSGT00940000154146.b.a.x.b #20	ENSGT00950000182940.b.a.a.g.b.b #21	ENSGT00530000063712.a.a.o.b.a.a.a.b #22	ENSGT00530000063712.a.a.o.a.k.a #23	ENSGT00940000154876.a.a.a.b.f #24	ENSGT00940000154876.a.a.a.a.b #25	ENSGT00940000156682.e.a.a #27	ENSGT00940000157771.t #28	ENSGT00940000156205.h.k.a.b	ENSGT00940000156205.h.k.b.a	ENSGT00940000156291.e.a	ENSGT01010000222360.D.b.f	ENSGT00940000155391.a.b.b.a	ENSGT00390000001443.a	ENSGT00550000075025.d	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.a.a.b	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.a.a.a.a	ENSGT00390000007681.b.a.a.m.b
Common carp reference	MODERN SPECIES		rasl12 (ENSCCRG00000051270)	abhd2a (ENSCCRG00000069839)	rlbp1a (ENSCCRG00000067263)	slc39a1 (ENSCCRG00000033956)	ENSCCRG00000033942	furina (ENSCCRG00000000334)	fes (ENSCCRG00000001238)	rhcga (ENSCCRG00000001212)	kif7 (ENSCCRG00000021446)	mrps11 (ENSCCRG00000073284) #17	mrpl46 (ENSCCRG00000017353) #18	NTRK3 (ENSCCRG00000074988) #19	ENSCCRG00000080887	si:dkey-172h23.2 (ENSCCRG00000062760) #20	sv2ba (ENSCCRG00000010713) #21	mespba (ENSCCRG00000059314) #22	ENSCCRG00000046283 #24	ENSCCRG00000079481 #25	igf1rb (ENSCCRG00000014052) #27	ENSCCRG00000066581 #28	ENSCCRG00000027348	ENSCCRG00000060414	ENSCCRG00000026815	ENSCCRG00000044124	elp4 (ENSCCRG00000000438)	pax6b (ENSCCRG00000028477)	immp1l (ENSCCRG00000000536)	ENSCCRG00000069413	ENSCCRG00000031150	mpped2a (ENSCCRG00000079412)	zdhhc13 (ENSCCRG00000019248)
Goldfish	MODERN SPECIES	47	ntn4 (ENSCARG00000067663)	dock11 (ENSCARG00000067570)	slc39a1 (ENSCARG00000067544)	ENSCARG00000067517	ENSCARG00000067506	furina (ENSCARG00000066982)	fes (ENSCARG00000066532)	rhcga (ENSCARG00000066260)	kif7 (ENSCARG00000066113)	mrps11 (ENSCARG00000066088) #17	mrpl46 (ENSCARG00000066075) #18	NTRK3 (ENSCARG00000065763) #19	ENSCARG00000065715 #20	ENSCARG00000065677 #20	sv2ba (ENSCARG00000065653) #21	mespba (ENSCARG00000065645) #22	mespaa (ENSCARG00000065640) #23	ENSCARG00000064612 #24	ANPEP (ENSCARG00000064330) #25	igf1rb (ENSCARG00000057409) #27	LRRC28 (ENSCARG00000057035) #28	ENSCARG00000057020	ENSCARG00000057010	ENSCARG00000056603	RCN1 (ENSCARG00000056482)	pax6b (ENSCARG00000054974)	elp4 (ENSCARG00000054681)	immp1l (ENSCARG00000054630)	ENSCARG00000054586	ENSCARG00000054449	mpped2a (ENSCARG00000054421)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00530000063712.a.a.o.b.a.a.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00530000063712.a.a.o.b.a.a.b #22
Golden-line barbel	MODERN SPECIES	189	UBAP1L (ENSSGRG00000036420)	KBTBD13 (ENSSGRG00000036421)	rasl12 (ENSSGRG00000036422)	rlbp1a (ENSSGRG00000036426)	ENSSGRG00000036429	furina (ENSSGRG00000036455)	fes (ENSSGRG00000037255)	rhcga (ENSSGRG00000037351)	ENSSGRG00000037361	mrps11 (ENSSGRG00000037362) #17	mrps11 (ENSSGRG00000037364) #17	ENSSGRG00000037367	NTRK3 (ENSSGRG00000037372) #19	ENSSGRG00000037380 #20	sv2ba (ENSSGRG00000037385) #21	mespba (ENSSGRG00000037917) #22	mespaa (ENSSGRG00000037918) #23	ENSSGRG00000037919	ANPEP (ENSSGRG00000037924) #24	ANPEP (ENSSGRG00000038984) #25	igf1rb (ENSSGRG00000039057) #27	ENSSGRG00000042028 #28	ENSSGRG00000042030	ENSSGRG00000042036	RCN1 (ENSSGRG00000042120)	pax6b (ENSSGRG00000042121)	elp4 (ENSSGRG00000042292)	immp1l (ENSSGRG00000042293)	ENSSGRG00000042294	ENSSGRG00000042295	mpped2a (ENSSGRG00000042297)
Zebrafish	MODERN SPECIES	22	rasl12 (ENSDARG00000002701)	abhd2a (ENSDARG00000025797)	rlbp1a (ENSDARG00000012504)	slc39a1 (ENSDARG00000058257)	ENSDARG00000105391	furina (ENSDARG00000062909)	fes (ENSDARG00000011449)	rhcga (ENSDARG00000003203)	kif7 (ENSDARG00000033099)	mrps11 (ENSDARG00000075129) #17	mrpl46 (ENSDARG00000016307) #18	NTRK3 (ENSDARG00000086214) #19	si:dkey-172h23.2 (ENSDARG00000023868) #20	sv2ba (ENSDARG00000057427) #21	mespaa (ENSDARG00000017078) #23	mespba (ENSDARG00000030347) #22	ENSDARG00000089706	ANPEP (ENSDARG00000036809) #25	igf1rb (ENSDARG00000034434) #27	LRRC28 (ENSDARG00000057477) #28	ENSDARG00000057527	ENSDARG00000073970	RCN1 (ENSDARG00000070006)	pax6b (ENSDARG00000045936)	elp4 (ENSDARG00000008852)	immp1l (ENSDARG00000045935)	ENSDARG00000105564	ENSDARG00000060962	btr05 (ENSDARG00000074813)	btr06 (ENSDARG00000054184)	ENSDARG00000105558
Otophysi	ANCESTRAL SPECIES																	ENSGT00530000063712.a.a.o.b.a.b #22
Cyprinoidei	ANCESTRAL SPECIES	14	ENSGT00940000160167	ENSGT00950000182902.b.a.d.b.a	ENSGT00940000164526.a	ENSGT00940000164669.k	ENSGT00950000182957.a.a.b	ENSGT00940000157220.a	ENSGT00940000158881	ENSGT00950000182844.b.b.b.a.a.i	ENSGT00940000159749	ENSGT00390000016068 #17	ENSGT00390000015400 #18	ENSGT00940000155645.i.b #19	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.b #21	ENSGT00530000063712.a.a.o.b.a.a #22	ENSGT00530000063712.a.a.o.b.a.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.b #24	ENSGT00940000154876.a.a.a.a #25	ENSGT00940000156682.e.a #27	ENSGT00940000157771 #28	ENSGT00940000156205.h.k.a	ENSGT00940000156291.e	ENSGT01010000222360.D.b	ENSGT00940000155391.a.b.b	ENSGT00390000001443	ENSGT00550000075025	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.a.b	ENSGT00950000183093.B.b	ENSGT00940000155663.f.a	ENSGT00390000007681.b.a.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	57	ENSGT00940000154222.c.r	ENSGT00990000206020.a.b	ENSGT00550000074924.c	ENSGT00940000156978.kb	ENSGT00940000155581.B.f	ENSGT00390000003374.g.a	ENSGT00940000158707.a.b.q.a	ENSGT00520000055637.A.b.yb	ENSGT00940000154158.i	ENSGT00390000005224.r	ENSGT00940000155645.j.c ##19	ENSGT00940000160936.d	ENSGT00950000182983.B.b.d	ENSGT00940000154146.b.a.w.b #20	ENSGT00950000182940.b.a.a.g.a.a ##21	ENSGT00530000063712.a.a.o.b.a.b.a #22	ENSGT00530000063712.a.a.o.a.l.a #23	ENSGT01100000263475.f.a.e.b.b	ENSGT01100000263475.f.a.e.b.a.a.a	ENSGT00940000154876.a.b.a.a ##25	ENSGT00970000193421.C.b.i.b #26	ENSGT00940000153377.B.c	ENSGT00940000156574.C.u	ENSGT00390000009899.a.d.o	ENSGT00990000209978.a	ENSGT00390000009663.i.a.a	ENSGT00940000165046.a	ENSGT00940000161379	ENSGT00990000204217.b	ENSGT00390000001802.ib.a	ENSGT00390000014700.b.a.a.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	17	atp6v1e1a (ENSCARG00000013693)	ENSCARG00000013675	ENSCARG00000013651	ada2a (ENSCARG00000013642)	ribc2 (ENSCARG00000013632)	ENSCARG00000013124	DYRK4 (ENSCARG00000013061)	zgc:154077 (ENSCARG00000013000)	zgc:77158 (ENSCARG00000012991)	fgf6a (ENSCARG00000012982)	tigara (ENSCARG00000012969)	ccnd2a (ENSCARG00000012945)	KLHL25 (ENSCARG00000012939)	ENSCARG00000012921	ENSCARG00000012643 ##21	mespbb (ENSCARG00000012632) #22	mespab (ENSCARG00000012629) #23	mhc1lga (ENSCARG00000012625)	ENSCARG00000012617	ENSCARG00000012615	anpepb.1 (ENSCARG00000009860) ##25	AP3S2 (ENSCARG00000009763) #26	ENSCARG00000009758	lrp5 (ENSCARG00000006697)	ppp6r3 (ENSCARG00000006093)	ENSCARG00000006042	gal (ENSCARG00000006030)	zgc:110339 (ENSCARG00000006022)	ENSCARG00000006018	cox8b (ENSCARG00000006008)	psmd13 (ENSCARG00000005621)
Goldfish	MODERN SPECIES	1219															ENSCARG00000032788 ##21	mespbb (ENSCARG00000033085) #22	mespab (ENSCARG00000033093) #23	ENSCARG00000033097	ENSCARG00000033123	ENSCARG00000030518	anpepb.1 (ENSCARG00000030735) ##25
Cyprininae_a	ANCESTRAL SPECIES	106	ENSGT00940000154222.c.r	ENSGT00990000206020.a.b	ENSGT00550000074924.c	ENSGT00940000156978.kb	ENSGT00940000155581.B.f	ENSGT00390000003374.g.a	ENSGT00940000158707.a.b.q.a	ENSGT00520000055637.A.b.yb	ENSGT00940000154158.i	ENSGT00390000005224.r	ENSGT00940000155645.j.c ##19	ENSGT00940000160936.d	ENSGT00950000182983.B.b.d	ENSGT00940000154146.b.a.w.b #20	ENSGT00950000182940.b.a.a.g.a.a ##21	ENSGT00530000063712.a.a.o.b.a.b.a #22	ENSGT00530000063712.a.a.o.a.l.a #23	ENSGT01100000263475.f.a.e.b.b.b	ENSGT00940000154876.a.b.a.a ##25	ENSGT00970000193421.C.b.i.a #26	ENSGT00940000153377.B.c	ENSGT00940000156574.C.u	ENSGT00390000009899.a.d.o	ENSGT00990000209978.a	ENSGT00390000009663.i.a.a	ENSGT00940000165046.a	ENSGT00940000161379	ENSGT00990000204217.b	ENSGT00390000001802.ib.a	ENSGT00390000014700.b.a.a.a	ENSGT00940000159310.a
Common carp reference	MODERN SPECIES	37	septin15 (ENSCCRG00000012341)	uba2 (ENSCCRG00000001245)	ca5a (ENSCCRG00000065075)	ENSCCRG00000081210	slc7a5 (ENSCCRG00000001021)	klhdc4 (ENSCCRG00000066095)	jph3b (ENSCCRG00000038054)	ENSCCRG00000058833	map1lc3b (ENSCCRG00000028252)	det1 (ENSCCRG00000028334)	ntrk3a (ENSCCRG00000009333) ##19	KLHL25 (ENSCCRG00000071936)	AGBL1 (ENSCCRG00000030098)	ENSCCRG00000060604 #20	ENSCCRG00000040010 ##21	mespbb (ENSCCRG00000030820) #22	mespab (ENSCCRG00000067084) #23	ENSCCRG00000030812	ENSCCRG00000040316	mespab (ENSCCRG00000040312) #23	ENSCCRG00000072483	ENSCCRG00000040302	anpepb.1 (ENSCCRG00000040290) ##25	anpepb.1 (ENSCCRG00000040240) ##25	ap3s2 (ENSCCRG00000040121) #26	lrp5 (ENSCCRG00000009797)	ppp6r3 (ENSCCRG00000010181)	ENSCCRG00000012535	gal (ENSCCRG00000012523)	zgc:110339 (ENSCCRG00000012538)	ENSCCRG00000012542
Golden-line barbel	MODERN SPECIES	37	ENSSGRG00000038226	ENSSGRG00000038224	uba2 (ENSSGRG00000038019)	ca5a (ENSSGRG00000037992)	slc7a5 (ENSSGRG00000037443)	ENSSGRG00000037423	jph3b (ENSSGRG00000037416)	map1lc3b (ENSSGRG00000037348)	det1 (ENSSGRG00000037339)	ntrk3a (ENSSGRG00000037329) ##19	ENSSGRG00000037328	KLHL25 (ENSSGRG00000037327)	ENSSGRG00000037324 #20	ENSSGRG00000037320 #20	ENSSGRG00000036762 ##21	mespbb (ENSSGRG00000036756) #22	mespab (ENSSGRG00000036755) #23	mhc1lga (ENSSGRG00000036754)	anpepb.1 (ENSSGRG00000036753) ##25	ap3s2 (ENSSGRG00000036752) #26	ENSSGRG00000036751	lrp5 (ENSSGRG00000034220)	ppp6r3 (ENSSGRG00000034077)	ENSSGRG00000034069	gal (ENSSGRG00000034053)	zgc:110339 (ENSSGRG00000034048)	ENSSGRG00000034047	cox8b (ENSSGRG00000034046)	psmd13 (ENSSGRG00000033391)	ric8a (ENSSGRG00000033287)	ehf (ENSSGRG00000033284)
Cyprininae	ANCESTRAL SPECIES	145	ENSGT00940000156978.jb	ENSGT00940000155581.B.e	ENSGT00390000003374.g.b	ENSGT00940000158707.a.b.q.b	ENSGT00940000175810	ENSGT00390000003374.h	ENSGT00940000158707.a.b.r	ENSGT00520000055637.A.b.xb	ENSGT00940000154158.j	ENSGT00390000005224.q	ENSGT00940000155645.j.d ##19	ENSGT00940000160936.c	ENSGT00950000182983.B.b.c	ENSGT00940000154146.b.a.w.a #20	ENSGT00950000182940.b.a.a.g.a.b ##21	ENSGT00530000063712.a.a.o.b.a.b.b #22	ENSGT00530000063712.a.a.o.a.l.b #23	ENSGT01100000263475.f.a.e.b.a.b.a.a.a	ENSGT01100000263475.f.a.e.b.a.a.b	ENSGT00940000154876.a.b.b ##25	ENSGT00940000154876.a.b.a.b ##25	ENSGT00970000193421.C.b.i.a #26	ENSGT00940000153377.B.d	ENSGT00940000156574.C.v	ENSGT00390000009899.a.d.p	ENSGT00990000209978.b	ENSGT00390000009663.i.a.b	ENSGT00990000204217.a	ENSGT00390000001802.ib.b	ENSGT00390000014700.b.a.a.b	ENSGT00940000159310.b
Cyprininae_a	ANCESTRAL SPECIES	73	ENSGT00940000156978.jb	ENSGT00940000155581.B.e	ENSGT00390000003374.g.b	ENSGT00940000158707.a.b.q.b	ENSGT00940000175810	ENSGT00390000003374.h	ENSGT00940000158707.a.b.r	ENSGT00520000055637.A.b.xb	ENSGT00940000154158.j	ENSGT00390000005224.q	ENSGT00940000155645.j.d ##19	ENSGT00940000160936.c	ENSGT00950000182983.B.b.c	ENSGT00940000154146.b.a.w.a #20	ENSGT00950000182940.b.a.a.g.a.b ##21	ENSGT00530000063712.a.a.o.b.a.b.b #22	ENSGT00530000063712.a.a.o.a.l.b #23	ENSGT01100000263475.f.a.e.b.a.b.a.a.a	ENSGT01100000263475.f.a.e.b.a.a.b	ENSGT00940000154876.a.b.b ##25	ENSGT00940000154876.a.b.a.b ##25	ENSGT00970000193421.C.b.i.b #26	ENSGT00940000153377.B.d	ENSGT00940000156574.C.v	ENSGT00390000009899.a.d.p	ENSGT00990000209978.b	ENSGT00390000009663.i.a.b	ENSGT00990000204217.a	ENSGT00390000001802.ib.b	ENSGT00390000014700.b.a.a.b	ENSGT00940000159310.b
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	49	uba2 (ENSSGRG00000010774)	ca5a (ENSSGRG00000010758)	slc7a5 (ENSSGRG00000010757)	ENSSGRG00000010756	klhdc4 (ENSSGRG00000010755)	ENSSGRG00000010753	ENSSGRG00000010752	map1lc3b (ENSSGRG00000010720)	det1 (ENSSGRG00000010696)	ntrk3a (ENSSGRG00000010694) ##19	ENSSGRG00000010691	KLHL25 (ENSSGRG00000010690)	ENSSGRG00000010687 #20	ENSSGRG00000010685 #20	ENSSGRG00000010337 ##21	mespbb (ENSSGRG00000010322) #22	mespab (ENSSGRG00000010319) #23	si:dkey-52p2.5 (ENSSGRG00000010317)	ENSSGRG00000010314	ANPEP (ENSSGRG00000007959) ##25	AP3S2 (ENSSGRG00000007847) #26	ENSSGRG00000007842	lrp5 (ENSSGRG00000007824)	lrp5 (ENSSGRG00000007819)	ppp6r3 (ENSSGRG00000007782)	zgc:110339 (ENSSGRG00000007778)	cox8b (ENSSGRG00000007765)	ENSSGRG00000007761	ric8a (ENSSGRG00000007694)	ehf (ENSSGRG00000007691)	carmil3 (ENSSGRG00000007688)
Golden-line barbel	MODERN SPECIES	121	ENSSGRG00000053464	ncoa2 (ENSSGRG00000053417)	prdm14 (ENSSGRG00000053411)	ngdn (ENSSGRG00000053409)	pabpn1 (ENSSGRG00000053408)	ENSSGRG00000053407	JPH1 (ENSSGRG00000053406)	gdap1 (ENSSGRG00000053405)	pi15a (ENSSGRG00000053403)	CRISPLD1 (ENSSGRG00000053402)	dok6 (ENSSGRG00000053401)	cd226 (ENSSGRG00000053400)	RTTN (ENSSGRG00000053397)	ENSSGRG00000053394	cbln2b (ENSSGRG00000053388)	mespbb (ENSSGRG00000053387) #22	NETO1 (ENSSGRG00000053386)	timm21 (ENSSGRG00000053385)	ENSSGRG00000053383
Common carp reference	MODERN SPECIES	33	uba2 (ENSCCRG00000000370)	ENSCCRG00000076290	ca5a (ENSCCRG00000058562)	slc7a5 (ENSCCRG00000079372)	klhdc4 (ENSCCRG00000038039)	jph3b (ENSCCRG00000067433)	ZCCHC14 (ENSCCRG00000004005)	map1lc3b (ENSCCRG00000004019)	det1 (ENSCCRG00000040862)	ntrk3a (ENSCCRG00000072351) ##19	ENSCCRG00000069030	KLHL25 (ENSCCRG00000037663)	ENSCCRG00000018929 #20	ENSCCRG00000037242 #20	ENSCCRG00000030842 ##21	mespbb (ENSCCRG00000077122) #22	ENSCCRG00000060820	mespab (ENSCCRG00000041730) #23	ENSCCRG00000041751	ENSCCRG00000054038	ENSCCRG00000041833 ##25	anpepb.1 (ENSCCRG00000056750) ##25	ENSCCRG00000076136 #26	ENSCCRG00000061403	lrp5 (ENSCCRG00000041247)	ppp6r3 (ENSCCRG00000009623)	ENSCCRG00000009613	gal (ENSCCRG00000009596)	psmd13 (ENSCCRG00000019004)	cox8b (ENSCCRG00000009591)	ric8a (ENSCCRG00000009508)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	45	guca1g (ENSCARG00000027811)	acte1 (ENSCARG00000027820)	shank2b (ENSCARG00000027895)	coq9 (ENSCARG00000028017)	ciapin1 (ENSCARG00000028072)	prmt7 (ENSCARG00000028095)	dbx1b (ENSCARG00000028158)	ENSCARG00000028163	map1lc3b (ENSCARG00000028179)	det1 (ENSCARG00000028213)	ENSCARG00000028236	KLHL25 (ENSCARG00000028265)	ENSCARG00000028275 #20	ENSCARG00000028286 #20	ENSCARG00000028314 ##21	mespbb (ENSCARG00000028542) #22	mespab (ENSCARG00000028545) #23	ENSCARG00000028550	ENSCARG00000028556	ENSCARG00000028562	ENSCARG00000028572	ENSCARG00000028579	ANPEP (ENSCARG00000028590) ##25	anpepb.1 (ENSCARG00000028644) ##25	ap3s2 (ENSCARG00000031020) #26	ENSCARG00000031098	lrp5 (ENSCARG00000031274)	ppp6r3 (ENSCARG00000038045)	ENSCARG00000039150	gal (ENSCARG00000039166)	cox8b (ENSCARG00000039204)
Goldfish	MODERN SPECIES	184																mespbb (ENSCARG00000034029) #22	ENSCARG00000034033	mespab (ENSCARG00000034039) #23	ENSCARG00000034045	ENSCARG00000034065	ENSCARG00000034124
Zebrafish	MODERN SPECIES	17	ccl33.2 (ENSDARG00000102519)	uba2 (ENSDARG00000101332)	ca5a (ENSDARG00000101778)	slc7a5 (ENSDARG00000099265)	klhdc4 (ENSDARG00000100206)	jph3b (ENSDARG00000102204)	ZCCHC14 (ENSDARG00000101242)	ENSDARG00000103098	map1lc3b (ENSDARG00000101127)	det1 (ENSDARG00000098247)	ntrk3a (ENSDARG00000077228) ##19	ENSDARG00000104384	KLHL25 (ENSDARG00000102418)	ENSDARG00000079994 #20	SV2B (ENSDARG00000060711) ##21	mespbb (ENSDARG00000097947) #22	mespab (ENSDARG00000068761) #23	mhc1lia (ENSDARG00000097766)	mhc1lga (ENSDARG00000051713)	si:dkey-52p2.5 (ENSDARG00000096940)	mhc1lla (ENSDARG00000096977)	mhc1lda (ENSDARG00000023203)	mhc1lfa (ENSDARG00000051712)	ENSDARG00000051711	ENSDARG00000097352	mhc1lja (ENSDARG00000096830)	ENSDARG00000115781	ENSDARG00000051710	ENSDARG00000097275	ANPEP (ENSDARG00000097285) ##25	anpepb.1 (ENSDARG00000103878) ##25
Otophysi	ANCESTRAL SPECIES	19	ENSGT00940000154222.c	ENSGT00990000206020	ENSGT00550000074924	ENSGT00940000156978	ENSGT00940000155581.B	ENSGT00390000003374	ENSGT00940000158707.a.b	ENSGT00520000055637.A.b	ENSGT00940000154158	ENSGT00390000005224	ENSGT00940000155645.j ##19	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.b.b.b ##20	ENSGT00950000182940.b.a.a.g.a ##21	ENSGT00530000063712.a.a.o.b.b #22	ENSGT00940000154876.a.b.a ##25	ENSGT00970000193421.C.b.i.a #26	ENSGT00940000154876.a.b.b ##25	ENSGT00970000193421.C.b.i.b #26	ENSGT00940000153377.B	ENSGT00940000156574.C	ENSGT00390000009899.a.d	ENSGT00940000167440	ENSGT00390000009663	ENSGT00940000165046.a	ENSGT00940000161379	ENSGT00990000204217	ENSGT00390000001802.ib	ENSGT00390000014700.b.a.a
Characiphysae	ANCESTRAL SPECIES	44	ENSGT00550000074924	ENSGT00940000156978	ENSGT00940000155581.C	ENSGT00940000155581.B	ENSGT00390000003374	ENSGT00940000158707.a.b	ENSGT00520000055637.A.b	ENSGT00940000154158	ENSGT00390000005224	ENSGT00940000155645.j ##19	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.b.b.a.b ##20	ENSGT00940000154146.b.b.b ##20	ENSGT00950000182940.b.a.a.g.a ##21	ENSGT00530000063712.a.a.o.b.b #22	ENSGT00940000154876.a.b.b ##25	ENSGT00940000154876.a.b.a ##25	ENSGT00970000193421.C.b.i.b #26	ENSGT00940000153377.B	ENSGT00940000156574.C.x.b	ENSGT00390000009899.a.d	ENSGT00940000167440	ENSGT00390000009663	ENSGT00940000165046.a	ENSGT00940000161379	ENSGT00990000204217	ENSGT00390000001802.ib	ENSGT00390000014700.b.a.a	ENSGT00940000157816.a.a	ENSGT00940000158825.d
Channel catfish	MODERN SPECIES	27	FGFRL1 (ENSIPUG00000009229)	Rnf4 (ENSIPUG00000009170)	selenot2 (ENSIPUG00000009138)	ENSIPUG00000009121	Klhdc4 (ENSIPUG00000009054)	jph3 (ENSIPUG00000009045)	ENSIPUG00000009038	map1lc3b (ENSIPUG00000009011)	DET1 (ENSIPUG00000008962)	ntrk3a (ENSIPUG00000008905) ##19	ENSIPUG00000008844	klhl25 (ENSIPUG00000008829)	ENSIPUG00000008777 ##20	ENSIPUG00000008722 ##20	Sv2b (ENSIPUG00000008646) ##21	ENSIPUG00000008629 #22	vps4a (ENSIPUG00000008557)	SNTB2 (ENSIPUG00000008514)	spire2 (ENSIPUG00000008495)	chst6 (ENSIPUG00000008485)	tmem231 (ENSIPUG00000008468)	gabarapl2 (ENSIPUG00000008449)	adat1 (ENSIPUG00000008416)	wwp2 (ENSIPUG00000008281)	FRS2 (ENSIPUG00000008229)	nup160 (ENSIPUG00000008082)	ENSIPUG00000008069	gal (ENSIPUG00000008049)	ENSIPUG00000008036	cox8b (ENSIPUG00000008022)	psmd13 (ENSIPUG00000007952)
Characiphysae_b	ANCESTRAL SPECIES	174										ENSGT00940000155645.j ##19	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.b.b.a.b ##20	ENSGT00940000154146.b.b.b ##20	ENSGT00950000182940.b.a.a.g.a ##21	ENSGT00530000063712.a.a.o.b.b #22	ENSGT00940000154876.a.b.b ##25	ENSGT00940000154876.a.b.a ##25	ENSGT00970000193421.C.b.i.a #26	ENSGT00970000193421.C.b.i.b #26	ENSGT00940000153377.B	ENSGT00940000156574.C.x.b	ENSGT00390000009899.a.d	ENSGT00940000167440	ENSGT00390000009663	ENSGT00940000165046.a	ENSGT00940000161379	ENSGT00990000204217	ENSGT00390000001802.ib	ENSGT00390000014700.b.a.a	ENSGT00940000157816.a.a
Characoidei	DUPLICATION
Characoidei	ANCESTRAL SPECIES	121										ENSGT00940000155645.j ##19	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.b.b.a.b ##20	ENSGT00940000154146.b.b.b ##20	ENSGT00950000182940.b.a.a.g.a ##21	ENSGT00530000063712.a.a.o.b.b.a #22	ENSGT00530000063712.a.a.o.b.b.b #22	ENSGT00940000154876.a.b.b ##25	ENSGT00940000154876.a.b.a ##25	ENSGT00970000193421.C.b.i.a #26	ENSGT00940000153377.B	ENSGT00940000156574.C.x.b	ENSGT00390000009899.a.d	ENSGT00940000167440	ENSGT00390000009663	ENSGT00940000165046.a	ENSGT00940000161379	ENSGT00990000204217	ENSGT00390000001802.ib	ENSGT00390000014700.b.a.a	ENSGT00950000182939.b.b
Red-bellied piranha	MODERN SPECIES	652													ENSPNAG00000004530	ENSPNAG00000029193 ##20	SV2B (ENSPNAG00000005971) ##21	ENSPNAG00000029277 #22	ENSPNAG00000029297 #22	ENSPNAG00000029315	ENSPNAG00000004897	ENSPNAG00000029346
Mexicana tetra	MODERN SPECIES	16	fstl5 (ENSAMXG00000037831)	qdpra (ENSAMXG00000029100)	ldb2a (ENSAMXG00000013104)	TAPT1 (ENSAMXG00000038075)	ENSAMXG00000040842	NTRK3 (ENSAMXG00000012174) ##19	ENSAMXG00000036244	ENSAMXG00000038202	KLHL25 (ENSAMXG00000025580)	ENSAMXG00000041977 ##20	ENSAMXG00000032769	ENSAMXG00000036790 ##20	ENSAMXG00000042803	SV2B (ENSAMXG00000020811) ##21	ENSAMXG00000038154	ENSAMXG00000040913 #22	ENSAMXG00000030664 #22	ENSAMXG00000031726	ANPEP (ENSAMXG00000038996) ##25	anpepb.1 (ENSAMXG00000020798) ##25	ap3s2 (ENSAMXG00000040985) #26	ENSAMXG00000042631	ENSAMXG00000034325	lrp5 (ENSAMXG00000005136)	ppp6r3 (ENSAMXG00000042684)	gal (ENSAMXG00000004485)	zgc:110339 (ENSAMXG00000043837)	ENSAMXG00000037533	cox8b (ENSAMXG00000034391)	psmd13 (ENSAMXG00000029954)	ric8a (ENSAMXG00000042873)
Characoidei	ANCESTRAL SPECIES	121									ENSGT00940000155645.j ##19	ENSGT00940000160936	ENSGT00950000182983.B.b	ENSGT00940000154146.b.b.a.b ##20	ENSGT00940000154146.b.b.b ##20	ENSGT00950000182940.b.a.a.g.a ##21	ENSGT00530000063712.a.a.o.b.b.a #22	ENSGT00530000063712.a.a.o.b.b.b #22	ENSGT00940000154876.a.b.b ##25	ENSGT00940000154876.a.b.a ##25	ENSGT00970000193421.C.b.i.a #26	ENSGT00940000153377.B	ENSGT00940000156574.C.x.b	ENSGT00390000009899.a.d	ENSGT00940000167440	ENSGT00390000009663	ENSGT00940000165046.a	ENSGT00940000161379	ENSGT00990000204217	ENSGT00390000001802.ib	ENSGT00390000014700.b.a.a	ENSGT00950000182939.b.b	ENSGT00390000001511
Red-bellied piranha	MODERN SPECIES	652												ENSPNAG00000004530	ENSPNAG00000029193 ##20	SV2B (ENSPNAG00000005971) ##21	ENSPNAG00000029277 #22	ENSPNAG00000029297 #22	ENSPNAG00000029315	ENSPNAG00000004897	ENSPNAG00000029346
Mexicana tetra	MODERN SPECIES	16	qdpra (ENSAMXG00000029100)	ldb2a (ENSAMXG00000013104)	TAPT1 (ENSAMXG00000038075)	ENSAMXG00000040842	NTRK3 (ENSAMXG00000012174) ##19	ENSAMXG00000036244	ENSAMXG00000038202	KLHL25 (ENSAMXG00000025580)	ENSAMXG00000041977 ##20	ENSAMXG00000032769	ENSAMXG00000036790 ##20	ENSAMXG00000042803	SV2B (ENSAMXG00000020811) ##21	ENSAMXG00000038154	ENSAMXG00000040913 #22	ENSAMXG00000030664 #22	ENSAMXG00000031726	ANPEP (ENSAMXG00000038996) ##25	anpepb.1 (ENSAMXG00000020798) ##25	ap3s2 (ENSAMXG00000040985) #26	ENSAMXG00000042631	ENSAMXG00000034325	lrp5 (ENSAMXG00000005136)	ppp6r3 (ENSAMXG00000042684)	gal (ENSAMXG00000004485)	zgc:110339 (ENSAMXG00000043837)	ENSAMXG00000037533	cox8b (ENSAMXG00000034391)	psmd13 (ENSAMXG00000029954)	ric8a (ENSAMXG00000042873)	ENSAMXG00000004737
Electric eel	DUPLICATION
Electric eel	MODERN SPECIES	888														ENSEEEG00000018310 ##20	SV2B (ENSEEEG00000018311) ##21	ENSEEEG00000018314 #22	ENSEEEG00000018315 #22	ANPEP (ENSEEEG00000018322) ##25	anpepb.1 (ENSEEEG00000018339) ##25	ap3s2 (ENSEEEG00000018344) #26	ENSEEEG00000018348	ENSEEEG00000018349
Electric eel	MODERN SPECIES	888													ENSEEEG00000018310 ##20	SV2B (ENSEEEG00000018311) ##21	ENSEEEG00000018314 #22	ENSEEEG00000018315 #22	ANPEP (ENSEEEG00000018322) ##25	anpepb.1 (ENSEEEG00000018339) ##25	ap3s2 (ENSEEEG00000018344) #26	ENSEEEG00000018348	ENSEEEG00000018349
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00530000063712.a.a.o.b.b #22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00530000063712.a.a.o.b.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00530000063712.a.a.o.b.b #22
Golden-line barbel	MODERN SPECIES	4155																ENSSGRG00000006359 #22
Osteoglossiformes	ANCESTRAL SPECIES	13	ENSGT00950000182957.a.a.b	ENSGT00950000182772.B.a.b	ENSGT00940000157220.c	ENSGT00940000158881	ENSGT01030000234638.b.b.c.a	ENSGT00940000158927	ENSGT00950000182844.b.b.b.c	ENSGT00940000177011	ENSGT00940000159749	ENSGT00390000015400 #18	ENSGT00940000155645.h #19	ENSGT00940000160936.e	ENSGT00950000182983.B.b.g	ENSGT00940000154146.b.a #20	ENSGT00950000182940.b.a.a.g.a ##21	ENSGT00530000063712.a.a.o.b #22	ENSGT00530000063712.a.a.o.a #23	ENSGT00940000154876.a.a.a.a #25	ENSGT00970000193421.C.b #26	ENSGT00940000164605.c	ENSGT00940000156682.d #27	ENSGT00940000159268	ENSGT00940000157771 #28	ENSGT00940000156205.h.r.b	ENSGT00940000156291.f	ENSGT00940000157540.A.a ##36	ENSGT00940000160583	ENSGT00950000183112.a.a	ENSGT00730000111392.b	ENSGT01030000234535.F.a	ENSGT01080000257410.A.f.l #35
Asian bonytongue	MODERN SPECIES	2	ENSSFOG00015018499	ckmt1 (ENSSFOG00015018546)	FURIN (ENSSFOG00015018595)	fes (ENSSFOG00015018721)	MAN2A2 (ENSSFOG00015018761)	cib1 (ENSSFOG00015018869)	rhcga (ENSSFOG00015018883)	kif7 (ENSSFOG00015018916)	mrpl46 (ENSSFOG00015028871) #18	NTRK3 (ENSSFOG00015019029) #19	AGBL1 (ENSSFOG00015019065)	KLHL25 (ENSSFOG00015019111)	ENSSFOG00015019124 #20	ENSSFOG00015019161 #20	ENSSFOG00015019172 ##21	mespba (ENSSFOG00015019234) #22	mespaa (ENSSFOG00015019242) #23	ANPEP (ENSSFOG00015019256) #25	ap3s2 (ENSSFOG00015026735) #26	ENSSFOG00015019305	ENSSFOG00015019417 #27	ENSSFOG00015028186	LRRC28 (ENSSFOG00015019484) #28	mef2aa (ENSSFOG00015019521)	MCTP2 (ENSSFOG00015019584)	nr2f2 (ENSSFOG00015019658) ##36	lysmd4 (ENSSFOG00015032617)	rgma (ENSSFOG00015027403)	st8sia2 (ENSSFOG00015019731)	SLCO3A1 (ENSSFOG00015019746) #35	si:dkeyp-59c12.1 (ENSSFOG00015019777)
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	14	FURIN (ENSPKIG00000014806)	fes (ENSPKIG00000014722)	MAN2A2 (ENSPKIG00000014535)	cib1 (ENSPKIG00000014465)	ENSPKIG00000014449	rhcga (ENSPKIG00000014418)	ENSPKIG00000014399	kif7 (ENSPKIG00000014300)	mrpl46 (ENSPKIG00000014232) #18	NTRK3 (ENSPKIG00000014190) #19	AGBL1 (ENSPKIG00000014098)	KLHL25 (ENSPKIG00000014041)	ENSPKIG00000013917 #20	ENSPKIG00000013819 #20	ENSPKIG00000013786 ##21	mespba (ENSPKIG00000013766) #22	ENSPKIG00000013754	ANPEP (ENSPKIG00000013722) #25	AP3S2 (ENSPKIG00000013687) #26	ENSPKIG00000013636	IGF1R (ENSPKIG00000013566) #27	synm (ENSPKIG00000013517)	LRRC28 (ENSPKIG00000013445) #28	ENSPKIG00000013346	ENSPKIG00000013245	nr2f2 (ENSPKIG00000013209) ##36	lysmd4 (ENSPKIG00000013192)	rgma (ENSPKIG00000013169)	fam174b (ENSPKIG00000013141)	st8sia2 (ENSPKIG00000013101)	SLCO3A1 (ENSPKIG00000013050) #35
P. kingsleyae	MODERN SPECIES	148										NTRK3 (ENSPKIG00000019993) #19	AGBL1 (ENSPKIG00000020051)	KLHL25 (ENSPKIG00000020095)	si:dkey-172h23.2 (ENSPKIG00000020113) #20	ENSPKIG00000020142 ##20	sv2ba (ENSPKIG00000020160) #21	ENSPKIG00000020187 #22	mespab (ENSPKIG00000020197) #23	ANPEP (ENSPKIG00000020225) ##25	ap3s2 (ENSPKIG00000020282) #26	ENSPKIG00000020299	si:dkey-12e7.1 (ENSPKIG00000020306)	anpeplb (ENSPKIG00000020321)	arpin (ENSPKIG00000020365)	ENSPKIG00000020390	ENSPKIG00000020414 #27	si:ch211-107o10.3 (ENSPKIG00000020473)	tmed3 (ENSPKIG00000020495)	idh2 (ENSPKIG00000020516)	ZNF710 (ENSPKIG00000020562)	SEMA4B (ENSPKIG00000020599)	zgc:162879 (ENSPKIG00000020661)
Spotted gar	MODERN SPECIES	669	fanci (ENSLOCG00000014566)	POLG (ENSLOCG00000014557)	HCN4 (ENSLOCG00000014551)	ENSLOCG00000014550	nptna (ENSLOCG00000014545)	kif7 (ENSLOCG00000014540)	det1 (ENSLOCG00000014536)	mrps11 (ENSLOCG00000014531) #17	mrpl46 (ENSLOCG00000014530) #18	ntrk3a (ENSLOCG00000014521) #19	AGBL1 (ENSLOCG00000014513)	KLHL25 (ENSLOCG00000014512)	si:dkey-172h23.2 (ENSLOCG00000014508) #20	ENSLOCG00000014506 #20	sv2ba (ENSLOCG00000014500) #21	mespba (ENSLOCG00000014496) #22	mespaa (ENSLOCG00000017951) #23	mespaa (ENSLOCG00000014493) #23	anpepb.1 (ENSLOCG00000014478) ##25	ap3s2 (ENSLOCG00000014474) #26	si:dkey-12e7.1 (ENSLOCG00000017950)	ENSLOCG00000014462 ##25	arpin (ENSLOCG00000014461)	ENSLOCG00000014459	ENSLOCG00000014457	igf1ra (ENSLOCG00000014435) #27	ENSLOCG00000014432	synm (ENSLOCG00000014429)	TTC23 (ENSLOCG00000014422)	LRRC28 (ENSLOCG00000014419) #28	mef2aa (ENSLOCG00000014408)
Reedfish	MODERN SPECIES	8	POLG (ENSECRG00000020703)	fanci (ENSECRG00000020649)	kif7 (ENSECRG00000020590)	det1 (ENSECRG00000020568)	mrps11 (ENSECRG00000020555) #17	mrpl46 (ENSECRG00000020543) #18	ENSECRG00000020535 #19	ENSECRG00000020527	ENSECRG00000020519 #19	lmo4b (ENSECRG00000020511)	ENSECRG00000020496	AGBL1 (ENSECRG00000020465)	KLHL25 (ENSECRG00000020446)	AKAP13 (ENSECRG00000020247) ##20	sv2ba (ENSECRG00000020164) #21	mespba (ENSECRG00000020148) #22	mespab (ENSECRG00000020131) #23	ANPEP (ENSECRG00000020080) ##25	ICE2 (ENSECRG00000020035)	anxa2a (ENSECRG00000020009)	foxb1a (ENSECRG00000019999)	ENSECRG00000019988	ENSECRG00000019973	ENSECRG00000019958	prss1 (ENSECRG00000019919)	prss1 (ENSECRG00000019874)	apoea (ENSECRG00000019847)	apoa4b.2 (ENSECRG00000019837)	tomm40l (ENSECRG00000019809)	ENSECRG00000019789	ENSECRG00000019773