Vertebrata ANCESTRAL SPECIES 515 ENSGT00940000153321.b.b #22 ENSGT00390000015513 Gnathostomata ANCESTRAL SPECIES 141 ENSGT00940000159488 ENSGT00940000158577 ENSGT00390000003364 ENSGT00940000156437 ENSGT00390000008742 ENSGT00390000002374 ENSGT00940000153434 ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a Euteleostomi ANCESTRAL SPECIES 297 ENSGT00390000013329 ENSGT00940000161021 ENSGT00390000000289 ENSGT00940000160899 ENSGT01070000253744.a.a.a.a ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000015467 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a Sarcopterygii ANCESTRAL SPECIES 32 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434 ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT01070000253744.a.a.a.a ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a Tetrapoda ANCESTRAL SPECIES 2 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434 ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000168987 ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000166301 Amniota ANCESTRAL SPECIES 4 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT01040000244442 ENSGT00940000157674 ENSGT00940000156081 ENSGT00940000168229 Mammalia ANCESTRAL SPECIES 24 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT01040000244442 ENSGT00940000157674 ENSGT00940000156081 ENSGT00950000182925.D.a.a.b.a Theria ANCESTRAL SPECIES 30 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00390000002550 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT01040000244442 ENSGT00940000157674 ENSGT00940000156081 Eutheria DUPLICATION Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES 7 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.a #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00390000002550 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000156081 ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 Boreoeutheria ANCESTRAL SPECIES 10 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000154367.b ENSGT00940000153321.b.b.l.a #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00390000002550 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000168987 ENSGT00940000155950 ENSGT00510000048363 Laurasiatheria ANCESTRAL SPECIES 9 ENSGT00940000157487.ib ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000154367.b ENSGT00940000153321.b.b.l.a #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00390000002550 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b Laurasiatheria_a ANCESTRAL SPECIES 11 ENSGT00940000157487.ib ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000154367.b ENSGT00940000153321.b.b.l.a #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00390000002550 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b Laurasiatheria_b ANCESTRAL SPECIES 11 ENSGT00390000008742 ENSGT00940000157487.ib ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.a #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00390000002550 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b Carnivora DUPLICATION Carnivora ANCESTRAL SPECIES 25 ENSGT00940000157487.ib ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00940000164155 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.a.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b ENSGT00940000163051 Felidae DUPLICATION Felidae DUPLICATION Felidae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.b.a #22 Cat MODERN SPECIES 244 ZNF367 (ENSFCAG00000015587) SLC35D2 (ENSFCAG00000015586) HSD17B3 (ENSFCAG00000002732) ENSFCAG00000053266 ENSFCAG00000047910 ERCC6L2 (ENSFCAG00000002729) PTCH1 (ENSFCAG00000011205) FANCC (ENSFCAG00000003706) AOPEP (ENSFCAG00000003704) FBP1 (ENSFCAG00000009315) FBP2 (ENSFCAG00000001999) ENSFCAG00000027621 ENSFCAG00000001764 ENSFCAG00000049737 ENSFCAG00000002162 ENSFCAG00000048471 #22 ENSFCAG00000026406 ENSFCAG00000018798 DAPK1 (ENSFCAG00000005098) ENSFCAG00000026842 GAS1 (ENSFCAG00000044322) TUT7 (ENSFCAG00000003491) ISCA1 (ENSFCAG00000003489) ENSFCAG00000041024 GOLM1 (ENSFCAG00000009865) NAA35 (ENSFCAG00000009864) AGTPBP1 (ENSFCAG00000028018) NTRK2 (ENSFCAG00000009081) SLC28A3 (ENSFCAG00000010701) RMI1 (ENSFCAG00000014864) HNRNPK (ENSFCAG00000014862) Panthera ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.b.a #22 Panthera_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.b.a #22 leopard MODERN SPECIES 94 HABP4 (ENSPPRG00000020486) ZNF367 (ENSPPRG00000020267) SLC35D2 (ENSPPRG00000020058) HSD17B3 (ENSPPRG00000019886) ENSPPRG00000019238 PTCH1 (ENSPPRG00000019039) FANCC (ENSPPRG00000018311) AOPEP (ENSPPRG00000018024) FBP1 (ENSPPRG00000017781) FBP2 (ENSPPRG00000017726) ENSPPRG00000017692 ENSPPRG00000017629 ENSPPRG00000017508 ##22 ENSPPRG00000017460 ##22 ENSPPRG00000017238 ##22 ENSPPRG00000016997 #22 ENSPPRG00000015243 DAPK1 (ENSPPRG00000015066) ENSPPRG00000013927 GAS1 (ENSPPRG00000011967) TUT7 (ENSPPRG00000011084) ISCA1 (ENSPPRG00000010890) C9orf153 (ENSPPRG00000010876) GOLM1 (ENSPPRG00000010855) NAA35 (ENSPPRG00000010818) ENSPPRG00000010800 AGTPBP1 (ENSPPRG00000010671) NTRK2 (ENSPPRG00000010381) SLC28A3 (ENSPPRG00000009891) RMI1 (ENSPPRG00000011922) HNRNPK (ENSPPRG00000009832) Felidae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.b.b ##22 Panthera ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.b.b ##22 Panthera_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.b.b ##22 leopard MODERN SPECIES 94 SLC28A3 (ENSPPRG00000009891) NTRK2 (ENSPPRG00000010381) AGTPBP1 (ENSPPRG00000010671) ENSPPRG00000010800 NAA35 (ENSPPRG00000010818) GOLM1 (ENSPPRG00000010855) C9orf153 (ENSPPRG00000010876) ISCA1 (ENSPPRG00000010890) TUT7 (ENSPPRG00000011084) GAS1 (ENSPPRG00000011967) ENSPPRG00000013927 DAPK1 (ENSPPRG00000015066) ENSPPRG00000015243 ENSPPRG00000016997 #22 ENSPPRG00000017238 ##22 ENSPPRG00000017460 ##22 ENSPPRG00000017508 ##22 ENSPPRG00000017629 ENSPPRG00000017692 FBP2 (ENSPPRG00000017726) FBP1 (ENSPPRG00000017781) AOPEP (ENSPPRG00000018024) FANCC (ENSPPRG00000018311) PTCH1 (ENSPPRG00000019039) ENSPPRG00000019238 HSD17B3 (ENSPPRG00000019886) SLC35D2 (ENSPPRG00000020058) ZNF367 (ENSPPRG00000020267) HABP4 (ENSPPRG00000020486) ENSPPRG00000021098 PRXL2C (ENSPPRG00000021166) Felidae ANCESTRAL SPECIES 100 ENSGT00940000153321.b.b.l.a.b.a ##22 ENSGT00940000153321.b.b.k.d ##22 Panthera DUPLICATION Panthera DUPLICATION Panthera ANCESTRAL SPECIES 143 ENSGT00940000153321.b.b.l.a.b.a.a.a ##22 ENSGT00940000153321.b.b.k.d ##22 Tiger MODERN SPECIES 292 ZNF367 (ENSPTIG00000010773) SLC35D2 (ENSPTIG00000010233) HSD17B3 (ENSPTIG00000009924) ENSPTIG00000009613 ENSPTIG00000009148 PTCH1 (ENSPTIG00000007887) FANCC (ENSPTIG00000007601) ENSPTIG00000007589 AOPEP (ENSPTIG00000007069) FBP1 (ENSPTIG00000006777) FBP2 (ENSPTIG00000006636) ENSPTIG00000006375 ENSPTIG00000006150 ENSPTIG00000005805 ENSPTIG00000005691 ##22 ENSPTIG00000005532 ##22 ENSPTIG00000005486 ##22 Panthera_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.a.a.a ##22 leopard MODERN SPECIES 94 RMI1 (ENSPPRG00000011922) SLC28A3 (ENSPPRG00000009891) NTRK2 (ENSPPRG00000010381) AGTPBP1 (ENSPPRG00000010671) ENSPPRG00000010800 NAA35 (ENSPPRG00000010818) GOLM1 (ENSPPRG00000010855) C9orf153 (ENSPPRG00000010876) ISCA1 (ENSPPRG00000010890) TUT7 (ENSPPRG00000011084) GAS1 (ENSPPRG00000011967) ENSPPRG00000013927 DAPK1 (ENSPPRG00000015066) ENSPPRG00000015243 ENSPPRG00000016997 #22 ENSPPRG00000017238 ##22 ENSPPRG00000017460 ##22 ENSPPRG00000017508 ##22 ENSPPRG00000017629 ENSPPRG00000017692 FBP2 (ENSPPRG00000017726) FBP1 (ENSPPRG00000017781) AOPEP (ENSPPRG00000018024) FANCC (ENSPPRG00000018311) PTCH1 (ENSPPRG00000019039) ENSPPRG00000019238 HSD17B3 (ENSPPRG00000019886) SLC35D2 (ENSPPRG00000020058) ZNF367 (ENSPPRG00000020267) HABP4 (ENSPPRG00000020486) ENSPPRG00000021098 Panthera ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.a.a.b ##22 Tiger MODERN SPECIES 292 ENSPTIG00000005486 ##22 ENSPTIG00000005532 ##22 ENSPTIG00000005691 ##22 ENSPTIG00000005805 ENSPTIG00000006150 ENSPTIG00000006375 FBP2 (ENSPTIG00000006636) FBP1 (ENSPTIG00000006777) AOPEP (ENSPTIG00000007069) ENSPTIG00000007589 FANCC (ENSPTIG00000007601) PTCH1 (ENSPTIG00000007887) ENSPTIG00000009148 ENSPTIG00000009613 HSD17B3 (ENSPTIG00000009924) SLC35D2 (ENSPTIG00000010233) ZNF367 (ENSPTIG00000010773) HABP4 (ENSPTIG00000010954) Panthera ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.a.b ##22 Panthera_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.a.b ##22 lion MODERN SPECIES 13 C9orf64 (ENSPLOG00000013829) HNRNPK (ENSPLOG00000013759) RMI1 (ENSPLOG00000013722) SLC28A3 (ENSPLOG00000013564) NTRK2 (ENSPLOG00000012890) AGTPBP1 (ENSPLOG00000012669) NAA35 (ENSPLOG00000012557) GOLM1 (ENSPLOG00000012515) C9orf153 (ENSPLOG00000012463) ISCA1 (ENSPLOG00000012377) TUT7 (ENSPLOG00000012055) GAS1 (ENSPLOG00000011897) ENSPLOG00000011853 DAPK1 (ENSPLOG00000011696) ENSPLOG00000011540 ENSPLOG00000010937 ##22 ENSPLOG00000010849 ENSPLOG00000010600 ENSPLOG00000010163 FBP2 (ENSPLOG00000010075) FBP1 (ENSPLOG00000010008) AOPEP (ENSPLOG00000009897) FANCC (ENSPLOG00000009864) PTCH1 (ENSPLOG00000009736) ERCC6L2 (ENSPLOG00000009574) ENSPLOG00000009543 HSD17B3 (ENSPLOG00000009419) SLC35D2 (ENSPLOG00000009228) ZNF367 (ENSPLOG00000009156) HABP4 (ENSPLOG00000009107) ENSPLOG00000008892 Cat DUPLICATION Cat MODERN SPECIES 3 ENSFCAG00000009438 ENSFCAG00000044377 ##22 Cat MODERN SPECIES 88 ENSFCAG00000005706 ##22 ENSFCAG00000026329 ##22 Caniformia DUPLICATION Caniformia ANCESTRAL SPECIES 29 ENSGT00940000157487.ib ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00940000164155 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.a.b.c #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b ENSGT00940000163051 Caniformia_b ANCESTRAL SPECIES 32 ENSGT00940000157487.ib ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00940000164155 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.a.b.c #22 ENSGT00940000154367.b.n ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b Ursidae ANCESTRAL SPECIES 43 ENSGT00940000157487.ib ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT01000000221508 ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.a.b.c #22 ENSGT00940000154367.b.n ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000163752 ENSGT00940000160266.e ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b ENSGT00940000163051 Ursus ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.c #22 Polar bear MODERN SPECIES 465 ENSUMAG00000007595 DAPK1 (ENSUMAG00000007670) ENSUMAG00000008185 ENSUMAG00000008238 #22 ENSUMAG00000008543 FBP2 (ENSUMAG00000008547) FBP1 (ENSUMAG00000008553) AOPEP (ENSUMAG00000008563) ENSUMAG00000008576 ENSUMAG00000008590 FANCC (ENSUMAG00000008614) PTCH1 (ENSUMAG00000008813) ERCC6L2 (ENSUMAG00000009823) HSD17B3 (ENSUMAG00000009841) SLC35D2 (ENSUMAG00000009849) ENSUMAG00000009860 ENSUMAG00000009874 PRXL2C (ENSUMAG00000009894) ZNF510 (ENSUMAG00000009897) American black bear MODERN SPECIES 4845 ENSUAMG00000027541 #22 Giant Panda MODERN SPECIES 8 GKAP1 (ENSAMEG00000003861) KIF27 (ENSAMEG00000003891) C9orf64 (ENSAMEG00000003917) HNRNPK (ENSAMEG00000003926) RMI1 (ENSAMEG00000019422) SLC28A3 (ENSAMEG00000003963) NTRK2 (ENSAMEG00000003994) AGTPBP1 (ENSAMEG00000004025) NAA35 (ENSAMEG00000004087) GOLM1 (ENSAMEG00000004131) ENSAMEG00000004136 TUT7 (ENSAMEG00000004148) GAS1 (ENSAMEG00000019430) ENSAMEG00000024576 ENSAMEG00000006710 ENSAMEG00000011406 #22 ENSAMEG00000011432 ##22 ENSAMEG00000011466 ENSAMEG00000011494 AOPEP (ENSAMEG00000011525) FANCC (ENSAMEG00000011534) PTCH1 (ENSAMEG00000011568) ERCC6L2 (ENSAMEG00000011657) HSD17B3 (ENSAMEG00000007099) SLC35D2 (ENSAMEG00000012082) ZNF367 (ENSAMEG00000025616) HABP4 (ENSAMEG00000012025) ENSAMEG00000011999 PRXL2C (ENSAMEG00000011995) ZNF782 (ENSAMEG00000024008) ENSAMEG00000030766 Canidae ANCESTRAL SPECIES 47 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00940000164155 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.a.b.d #22 ENSGT00940000153321.b.b.l.a.b.c #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a.m.a Canis_lupus ANCESTRAL SPECIES ENSGT01100000263605.i.a ENSGT00940000157487.ib ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164155 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.a.b.c #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a.m.a.b Dog MODERN SPECIES KIF27 (ENSCAFG00845005776) C1H9orf64 (ENSCAFG00845005648) HNRNPK (ENSCAFG00845005598) SLC28A3 (ENSCAFG00845005455) NTRK2 (ENSCAFG00845005371) ENSCAFG00845005339 AGTPBP1 (ENSCAFG00845005286) NAA35 (ENSCAFG00845005251) GOLM1 (ENSCAFG00845005231) C9orf153 (ENSCAFG00845005214) ENSCAFG00845005203 TUT7 (ENSCAFG00845005138) ENSCAFG00845005091 DAPK1 (ENSCAFG00845005073) ENSCAFG00845005052 #22 ENSCAFG00845005046 #22 FBP2 (ENSCAFG00845005034) FBP1 (ENSCAFG00845005020) AOPEP (ENSCAFG00845004982) FANCC (ENSCAFG00845004921) PTCH1 (ENSCAFG00845003905) ERCC6L2 (ENSCAFG00845003753) HSD17B3 (ENSCAFG00845003593) ZNF367 (ENSCAFG00845003549) HABP4 (ENSCAFG00845003506) ENSCAFG00845003296 PRXL2C (ENSCAFG00845003191) ZNF510 (ENSCAFG00845003072) ZNF782 (ENSCAFG00845003018) ENSCAFG00845002925 ENSCAFG00845002888 Dingo MODERN SPECIES 125 C9orf64 (ENSCAFG00020023824) ENSCAFG00020023808 RMI1 (ENSCAFG00020023802) ENSCAFG00020023798 NTRK2 (ENSCAFG00020023722) AGTPBP1 (ENSCAFG00020023700) NAA35 (ENSCAFG00020023685) GOLM1 (ENSCAFG00020023678) ENSCAFG00020023677 TUT7 (ENSCAFG00020023620) GAS1 (ENSCAFG00020023611) ENSCAFG00020023609 ENSCAFG00020023607 ENSCAFG00020023601 DAPK1 (ENSCAFG00020023375) ENSCAFG00020023239 #22 FBP2 (ENSCAFG00020023226) FBP1 (ENSCAFG00020023224) AOPEP (ENSCAFG00020023220) FANCC (ENSCAFG00020023172) PTCH1 (ENSCAFG00020022802) ENSCAFG00020022764 ENSCAFG00020022761 HSD17B3 (ENSCAFG00020022744) SLC35D2 (ENSCAFG00020022723) ZNF367 (ENSCAFG00020022719) HABP4 (ENSCAFG00020022704) ENSCAFG00020022657 PRXL2C (ENSCAFG00020022646) ZNF510 (ENSCAFG00020022643) ZNF782 (ENSCAFG00020022642) Red fox MODERN SPECIES 194 GTPBP1 (ENSVVUG00000022607) JOSD1 (ENSVVUG00000022615) ENSVVUG00000022618 CBY1 (ENSVVUG00000022619) ENSVVUG00000022620 ENSVVUG00000022626 DMC1 (ENSVVUG00000022631) DDX17 (ENSVVUG00000022762) ENSVVUG00000022766 KDELR3 (ENSVVUG00000022770) KCNJ4 (ENSVVUG00000022771) CSNK1E (ENSVVUG00000022775) TMEM184B (ENSVVUG00000022788) MAFF (ENSVVUG00000022794) PLA2G6 (ENSVVUG00000022796) ENSVVUG00000022801 #22 FBP2 (ENSVVUG00000022821) FBP1 (ENSVVUG00000022822) AOPEP (ENSVVUG00000022825) FANCC (ENSVVUG00000022840) PTCH1 (ENSVVUG00000022848) ERCC6L2 (ENSVVUG00000022869) HSD17B3 (ENSVVUG00000022907) SLC35D2 (ENSVVUG00000022922) ZNF367 (ENSVVUG00000022936) HABP4 (ENSVVUG00000022970) CDC14B (ENSVVUG00000022980) PRXL2C (ENSVVUG00000023001) ENSVVUG00000023002 ENSVVUG00000023003 ZNF510 (ENSVVUG00000023006) Caniformia ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.d #22 Canidae ANCESTRAL SPECIES 47 ENSGT00940000157487.ib ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00940000164155 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.a.b.d #22 ENSGT00940000153321.b.b.l.a.b.c #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b ENSGT00940000163051 Canis_lupus ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.d #22 Dog MODERN SPECIES ENSCAFG00845005971 KIF27 (ENSCAFG00845005776) C1H9orf64 (ENSCAFG00845005648) HNRNPK (ENSCAFG00845005598) SLC28A3 (ENSCAFG00845005455) NTRK2 (ENSCAFG00845005371) ENSCAFG00845005339 AGTPBP1 (ENSCAFG00845005286) NAA35 (ENSCAFG00845005251) GOLM1 (ENSCAFG00845005231) C9orf153 (ENSCAFG00845005214) ENSCAFG00845005203 TUT7 (ENSCAFG00845005138) ENSCAFG00845005091 DAPK1 (ENSCAFG00845005073) ENSCAFG00845005052 #22 ENSCAFG00845005046 #22 FBP2 (ENSCAFG00845005034) FBP1 (ENSCAFG00845005020) AOPEP (ENSCAFG00845004982) FANCC (ENSCAFG00845004921) PTCH1 (ENSCAFG00845003905) ERCC6L2 (ENSCAFG00845003753) HSD17B3 (ENSCAFG00845003593) ZNF367 (ENSCAFG00845003549) HABP4 (ENSCAFG00845003506) ENSCAFG00845003296 PRXL2C (ENSCAFG00845003191) ZNF510 (ENSCAFG00845003072) ZNF782 (ENSCAFG00845003018) ENSCAFG00845002925 Caniformia_b ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.d #22 Ursidae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.d #22 Ursus ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.d #22 American black bear MODERN SPECIES 4844 ENSUAMG00000027539 #22 ENSUAMG00000027540 Mustelinae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.b.d #22 Ferret MODERN SPECIES 699 ENSMPUG00000005879 #22 ENSMPUG00000005869 ENSMPUG00000005859 ##22 Carnivora ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.a ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.a ##22 Ursidae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.a ##22 Giant Panda MODERN SPECIES 8 KIF27 (ENSAMEG00000003891) C9orf64 (ENSAMEG00000003917) HNRNPK (ENSAMEG00000003926) RMI1 (ENSAMEG00000019422) SLC28A3 (ENSAMEG00000003963) NTRK2 (ENSAMEG00000003994) AGTPBP1 (ENSAMEG00000004025) NAA35 (ENSAMEG00000004087) GOLM1 (ENSAMEG00000004131) ENSAMEG00000004136 TUT7 (ENSAMEG00000004148) GAS1 (ENSAMEG00000019430) ENSAMEG00000024576 ENSAMEG00000006710 ENSAMEG00000011406 #22 ENSAMEG00000011432 ##22 ENSAMEG00000011466 ENSAMEG00000011494 AOPEP (ENSAMEG00000011525) FANCC (ENSAMEG00000011534) PTCH1 (ENSAMEG00000011568) ERCC6L2 (ENSAMEG00000011657) HSD17B3 (ENSAMEG00000007099) SLC35D2 (ENSAMEG00000012082) ZNF367 (ENSAMEG00000025616) HABP4 (ENSAMEG00000012025) ENSAMEG00000011999 PRXL2C (ENSAMEG00000011995) ZNF782 (ENSAMEG00000024008) ENSAMEG00000030766 ENSAMEG00000006522 Ursus ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.a ##22 American black bear MODERN SPECIES 9234 ENSUAMG00000001649 ##22 Mustelinae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a.a ##22 Ferret MODERN SPECIES 699 ENSMPUG00000005879 #22 ENSMPUG00000005869 ENSMPUG00000005859 ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a #22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a #22 Glires ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a #22 Rodentia ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a #22 Rodentia_B ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a #22 Myomorpha ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a #22 Muroidea ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a #22 Muroidea_A ANCESTRAL SPECIES 14 ENSGT01100000263494.a.a.a.a.b.b ENSGT01050000244828.c.b.b.b.c.b ENSGT00940000156081 ENSGT00940000157345.a ENSGT00950000183043.a.b.b.a.b.u.a.a ENSGT00950000183043.a.b.b.a.a.a.a.a.a ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 Cricetidae ANCESTRAL SPECIES 22 ENSGT01100000263494.a.a.a.a.b.b ENSGT01050000244828.c.b.b.b.c.b ENSGT00940000156081 ENSGT00940000157345.a ENSGT00950000183043.a.b.b.a.b.u.a.a ENSGT00950000183043.a.b.b.a.a.a.a.a.a ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 Cricetidae_B ANCESTRAL SPECIES 22 ENSGT01100000263494.a.a.a.a.b.b ENSGT01050000244828.c.b.b.b.c.b ENSGT00940000156081 ENSGT00940000157345.a ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 Northern American deer mouse MODERN SPECIES 18 Or9s18 (ENSPEMG00000006716) Or14p1 (ENSPEMG00000000696) Mfsd14b (ENSPEMG00000006359) Prss47 (ENSPEMG00000024096) ENSPEMG00000009179 ENSPEMG00000025407 Fam240b (ENSPEMG00000020614) Cdk20 (ENSPEMG00000023165) Ctsl (ENSPEMG00000021285) #22 ENSPEMG00000021037 Prxl2c (ENSPEMG00000020672) Cdc14b (ENSPEMG00000020534) ENSPEMG00000021224 Zfp367 (ENSPEMG00000013770) Slc35d2 (ENSPEMG00000021173) Hsd17b3 (ENSPEMG00000021000) ENSPEMG00000006631 Ptch1 (ENSPEMG00000016117) Fancc (ENSPEMG00000022299) Aopep (ENSPEMG00000011169) Fbp1 (ENSPEMG00000020415) Fbp2 (ENSPEMG00000003200) ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000156081 ENSGT00940000157345.a ENSGT00950000183043.a.b.b.a.b.u.a.a ENSGT00950000183043.a.b.b.a.a.a.a.a.a ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001012071 ENSCGRG00001024215 ENSCGRG00001003953 Mfsd14b (ENSCGRG00001016271) Prss47 (ENSCGRG00001011133) ENSCGRG00001000347 Spata31 (ENSCGRG00001024965) Cntnap3 (ENSCGRG00001012388) Fam240b (ENSCGRG00001020040) Cdk20 (ENSCGRG00001001834) Ctsl (ENSCGRG00001023416) #22 Prxl2c (ENSCGRG00001003859) ENSCGRG00001002667 Cdc14b (ENSCGRG00001019066) Habp4 (ENSCGRG00001025040) Zfp367 (ENSCGRG00001022531) Slc35d2 (ENSCGRG00001020192) Hsd17b3 (ENSCGRG00001009870) ENSCGRG00001022738 ENSCGRG00001008618 Ptch1 (ENSCGRG00001010176) Fancc (ENSCGRG00001013491) Aopep (ENSCGRG00001012713) Fbp1 (ENSCGRG00001009150) Fbp2 (ENSCGRG00001022515) Cts8 (ENSCGRG00001013704) ##22 Murinae ANCESTRAL SPECIES 21 ENSGT01100000263494.a.a.a.a.b.b ENSGT01050000244828.c.b.b.b.c.b ENSGT00940000156081 ENSGT00940000157345.a ENSGT00950000183043.a.b.b.a.b.u.a.a ENSGT00950000183043.a.b.b.a.a.a.a.a.a ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 Mus ANCESTRAL SPECIES 18 ENSGT00940000155274.a.b.c.b ENSGT00530000063576.B ENSGT00390000005801 ENSGT00390000012916.t ENSGT00940000162284.e.b.a ENSGT01100000263494.a.a.a.a.b.b ENSGT01050000244828.c.b.b.b.c.b ENSGT00940000156081 ENSGT00940000157345.a ENSGT00950000183043.a.b.b.a.b.u.a.a ENSGT00950000183043.a.b.b.a.a.a.a.a.a ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 Mus_A ANCESTRAL SPECIES 14 ENSGT00940000153165.a.a.c.a.h ENSGT00940000155274.a.b.c.b ENSGT00530000063576.B ENSGT00390000005801 ENSGT00390000012916.t ENSGT00940000162284.e.b.a ENSGT01100000263494.a.a.a.a.b.b ENSGT01050000244828.c.b.b.b.c.b ENSGT00940000156081 ENSGT00940000157345.a ENSGT00950000183043.a.b.b.a.b.u.a.a ENSGT00950000183043.a.b.b.a.a.a.a.a.a ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 Mus_B ANCESTRAL SPECIES 13 ENSGT00390000005801 ENSGT00390000011190.y.a ENSGT00390000012916.t ENSGT00940000162111.d ENSGT00860000136162 ENSGT00940000162284.e.b.a ENSGT01100000263494.a.a.a.a.b.b ENSGT01050000244828.c.b.b.b.c.b ENSGT00940000156081 ENSGT00940000157345.a ENSGT00950000183043.a.b.b.a.b.u.a.a ENSGT00950000183043.a.b.b.a.a.a.a.a.a ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 Mus_C ANCESTRAL SPECIES 10 ENSGT00390000005801 ENSGT00390000011190.y.a ENSGT00390000012916.t ENSGT00940000162111.d ENSGT00860000136162 ENSGT00940000162284.e.b.a ENSGT01100000263494.a.a.a.a.b.b ENSGT01050000244828.c.b.b.b.c.b ENSGT00940000156081 ENSGT00940000157345.a ENSGT00950000183043.a.b.b.a.b.u.a.a ENSGT00950000183043.a.b.b.a.a.a.a.a.a ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 spretus MODERN SPECIES 4 MGP_SPRETEiJ_G0019537 Mterf3 (MGP_SPRETEiJ_G0019536) Gm10767 (MGP_SPRETEiJ_G0019535) Uqcrb (MGP_SPRETEiJ_G0019534) MGP_SPRETEiJ_G0019533 Gm10775 (MGP_SPRETEiJ_G0019532) Or9s18 (MGP_SPRETEiJ_G0019531) Or14p1 (MGP_SPRETEiJ_G0019530) Mfsd14b (MGP_SPRETEiJ_G0019529) Prss47 (MGP_SPRETEiJ_G0019528) Spata31d1c (MGP_SPRETEiJ_G0019527) Spata31 (MGP_SPRETEiJ_G0019526) Cntnap3 (MGP_SPRETEiJ_G0019525) Fam240b (MGP_SPRETEiJ_G0019524) Cdk20 (MGP_SPRETEiJ_G0019523) Ctsl (MGP_SPRETEiJ_G0019522) #22 Prxl2c (MGP_SPRETEiJ_G0019521) Cdc14b (MGP_SPRETEiJ_G0019520) Habp4 (MGP_SPRETEiJ_G0019519) Zfp367 (MGP_SPRETEiJ_G0019518) Slc35d2 (MGP_SPRETEiJ_G0019517) Hsd17b3 (MGP_SPRETEiJ_G0019516) MGP_SPRETEiJ_G0019515 Ptch1 (MGP_SPRETEiJ_G0019514) Fancc (MGP_SPRETEiJ_G0019513) Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Steppe mouse MODERN SPECIES 3039 Nlrp4f (ENSMSIG00000021800) Or9s18 (ENSMSIG00000021783) Or14p1 (ENSMSIG00000021778) ENSMSIG00000021775 Mfsd14b (ENSMSIG00000021759) ENSMSIG00000021748 Spata31d1c (ENSMSIG00000021735) ENSMSIG00000021729 Spata31 (ENSMSIG00000021723) ENSMSIG00000021707 Cntnap3 (ENSMSIG00000021683) ENSMSIG00000021657 ENSMSIG00000021654 Fam240b (ENSMSIG00000021651) Cdk20 (ENSMSIG00000021605) Ctsl (ENSMSIG00000021593) #22 Prxl2c (ENSMSIG00000021569) ENSMSIG00000021554 Cdc14b (ENSMSIG00000021401) Habp4 (ENSMSIG00000021366) Zfp367 (ENSMSIG00000021336) Slc35d2 (ENSMSIG00000021264) Hsd17b3 (ENSMSIG00000021249) ENSMSIG00000021243 Ercc6l2 (ENSMSIG00000021038) Ptch1 (ENSMSIG00000020849) Mouse MODERN SPECIES 4 Gm10772 (ENSMUSG00000091347) Zfp997 (ENSMUSG00000095909) Gm10139 (ENSMUSG00000063905) Zfp369 (ENSMUSG00000021514) Gm10775 (ENSMUSG00000074847) Nlrp4f (ENSMUSG00000032999) Or9s18 (ENSMUSG00000049806) Or14p1 (ENSMUSG00000108426) Mfsd14b (ENSMUSG00000038212) Prss47 (ENSMUSG00000090658) Spata31d1c (ENSMUSG00000074849) Spata31 (ENSMUSG00000056223) Cntnap3 (ENSMUSG00000033063) Fam240b (ENSMUSG00000096537) Cdk20 (ENSMUSG00000021483) Ctsl (ENSMUSG00000021477) #22 Prxl2c (ENSMUSG00000021482) Cdc14b (ENSMUSG00000033102) Habp4 (ENSMUSG00000021476) Zfp367 (ENSMUSG00000044934) Slc35d2 (ENSMUSG00000033114) Hsd17b3 (ENSMUSG00000033122) Ercc6l2 (ENSMUSG00000021470) Ptch1 (ENSMUSG00000021466) Fancc (ENSMUSG00000021461) Aopep (ENSMUSG00000021458) Fbp1 (ENSMUSG00000069805) Fbp2 (ENSMUSG00000021456) Gm5141 (ENSMUSG00000091183) Platr25 (ENSMUSG00000074863) 6720489N17Rik (ENSMUSG00000072066) Ryukyu mouse MODERN SPECIES 4 MGP_CAROLIEiJ_G0018657 Zfp712 (MGP_CAROLIEiJ_G0018656) Ptdss1 (MGP_CAROLIEiJ_G0018655) Mterf3 (MGP_CAROLIEiJ_G0018654) Uqcrb (MGP_CAROLIEiJ_G0018653) Nlrp4f (MGP_CAROLIEiJ_G0018652) Or9s18 (MGP_CAROLIEiJ_G0018651) Or14p1 (MGP_CAROLIEiJ_G0018650) Mfsd14b (MGP_CAROLIEiJ_G0018649) Prss47 (MGP_CAROLIEiJ_G0018648) Spata31d1c (MGP_CAROLIEiJ_G0018647) Spata31 (MGP_CAROLIEiJ_G0018646) Cntnap3 (MGP_CAROLIEiJ_G0018645) Fam240b (MGP_CAROLIEiJ_G0018644) Cdk20 (MGP_CAROLIEiJ_G0018643) Ctsl (MGP_CAROLIEiJ_G0018642) #22 Prxl2c (MGP_CAROLIEiJ_G0018641) Cdc14b (MGP_CAROLIEiJ_G0018640) Habp4 (MGP_CAROLIEiJ_G0018639) Zfp367 (MGP_CAROLIEiJ_G0018638) Slc35d2 (MGP_CAROLIEiJ_G0018637) Hsd17b3 (MGP_CAROLIEiJ_G0018636) MGP_CAROLIEiJ_G0018635 Ptch1 (MGP_CAROLIEiJ_G0018634) Fancc (MGP_CAROLIEiJ_G0018633) Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a #22 Sciuridae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a #22 Marmotini ANCESTRAL SPECIES 67 ENSGT00940000154367.a ENSGT00940000163051 ENSGT00940000153505.a.b.b ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.a #22 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 ENSGT00940000153393.A ENSGT00940000154686 ENSGT00390000018415 ENSGT00390000000781 ENSGT00390000003058.a ENSGT01100000263534.b.k.a.a.b.b.q.b ENSGT00390000007058 ENSGT00940000154639 ENSGT00950000183066.a.b.a.a Marmotini_b ANCESTRAL SPECIES 143 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.a #22 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 ENSGT00940000153393.A ENSGT00940000154686 ENSGT00390000018415 ENSGT00390000000781 ENSGT00390000003058.a ENSGT01100000263534.b.k.a.a.b.b.q.b ENSGT00390000007058 ENSGT00940000154639 ENSGT00950000183066.a.b.a.a Arctic ground squirrel MODERN SPECIES 257 ENSUPAG00010017488 ENSUPAG00010017475 PTCH1 (ENSUPAG00010017414) FANCC (ENSUPAG00010017355) AOPEP (ENSUPAG00010017325) FBP1 (ENSUPAG00010017318) FBP2 (ENSUPAG00010017303) ENSUPAG00010017289 #22 ENSUPAG00010017286 MC2R (ENSUPAG00010017285) MC5R (ENSUPAG00010017280) RNMT (ENSUPAG00010017265) FAM210A (ENSUPAG00010017260) LDLRAD4 (ENSUPAG00010017226) CEP192 (ENSUPAG00010017168) SEH1L (ENSUPAG00010017147) PTPN2 (ENSUPAG00010017133) PSMG2 (ENSUPAG00010017129) CEP76 (ENSUPAG00010017117) SPIRE1 (ENSUPAG00010017020) ENSUPAG00010016938 Alpin marmot MODERN SPECIES 89 CTSV (ENSMMMG00000022033) ENSMMMG00000022038 ZNF782 (ENSMMMG00000022039) ZNF510 (ENSMMMG00000022042) PRXL2C (ENSMMMG00000022044) ENSMMMG00000002227 ENSMMMG00000002250 SLC35D2 (ENSMMMG00000002267) HSD17B3 (ENSMMMG00000002462) ENSMMMG00000002531 PTCH1 (ENSMMMG00000002556) FANCC (ENSMMMG00000002674) AOPEP (ENSMMMG00000002776) FBP1 (ENSMMMG00000002815) FBP2 (ENSMMMG00000002826) ENSMMMG00000002840 #22 MC2R (ENSMMMG00000002896) MC5R (ENSMMMG00000002904) Atlantogenata ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a #22 Xenarthra ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.a #22 Armadillo MODERN SPECIES 2259 ENSDNOG00000035637 TSC22D2 (ENSDNOG00000036442) ENSDNOG00000049552 #22 ENSDNOG00000037965 EIF2A (ENSDNOG00000014002) SELENOT (ENSDNOG00000011743) ERICH6 (ENSDNOG00000048785) SIAH2 (ENSDNOG00000043769) MINDY4B (ENSDNOG00000025313) ENSDNOG00000019809 GPR171 (ENSDNOG00000010876) P2RY14 (ENSDNOG00000015185) GPR87 (ENSDNOG00000010879) P2RY13 (ENSDNOG00000033722) P2RY12 (ENSDNOG00000010893) MED12L (ENSDNOG00000010799) IGSF10 (ENSDNOG00000010900) Eutheria ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b ##22 Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000154367.b ENSGT00940000153321.b.b.l.b ##22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00390000002550 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.b ##22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00390000002550 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b Glires ANCESTRAL SPECIES 9 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.b ##22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b ENSGT00940000163051 Rodentia ANCESTRAL SPECIES 9 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.b ##22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a Rodentia_B ANCESTRAL SPECIES 6 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.b ##22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000154367.a ENSGT00530000069333.a ENSGT00940000160228 Myomorpha ANCESTRAL SPECIES 60 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.b ##22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000154367.a ENSGT00530000069333.a ENSGT00940000160228 Muroidea DUPLICATION Muroidea ANCESTRAL SPECIES 72 ENSGT00530000069333.a ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b ##22 ENSGT00940000153321.b.b.l.b.a ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.a ENSGT00390000002374 ENSGT00940000157487 ENSGT00390000008742 Muroidea_A DUPLICATION Muroidea_A DUPLICATION Muroidea_A DUPLICATION Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.a Cricetidae ANCESTRAL SPECIES 22 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.b.a.b Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.a.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.b.a.b Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 BC051665 (ENSPEMG00000025235) ##22 Dapk1 (ENSPEMG00000022627) Gas1 (ENSPEMG00000007789) Tut7 (ENSPEMG00000014030) ENSPEMG00000029941 ENSPEMG00000028848 ENSPEMG00000025105 ENSPEMG00000025782 4921517D22Rik (ENSPEMG00000022165) Golm1 (ENSPEMG00000021119) Naa35 (ENSPEMG00000020283) Agtpbp1 (ENSPEMG00000003465) ENSPEMG00000030036 Ntrk2 (ENSPEMG00000000060) Slc28a3 (ENSPEMG00000016674) Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.b.a.b Golden Hamster MODERN SPECIES 699 Habp4 (ENSMAUG00000020977) Zfp367 (ENSMAUG00000019699) Slc35d2 (ENSMAUG00000016504) Hsd17b3 (ENSMAUG00000018759) Ercc6l2 (ENSMAUG00000004820) Ptch1 (ENSMAUG00000014816) Fancc (ENSMAUG00000012407) Aopep (ENSMAUG00000003279) Fbp1 (ENSMAUG00000015819) Fbp2 (ENSMAUG00000017596) ENSMAUG00000016362 ##22 Cts8 (ENSMAUG00000018878) ##22 Ctsr (ENSMAUG00000014961) ##22 Cts6 (ENSMAUG00000016662) ##22 Ctsj (ENSMAUG00000008852) ##22 Ctsll3 (ENSMAUG00000014374) ##22 BC051665 (ENSMAUG00000012142) ##22 Dapk1 (ENSMAUG00000000180) Gas1 (ENSMAUG00000019435) Tut7 (ENSMAUG00000006963) ENSMAUG00000000645 1700014D04Rik (ENSMAUG00000020029) ENSMAUG00000012538 Naa35 (ENSMAUG00000006704) ENSMAUG00000002599 Ntrk2 (ENSMAUG00000014898) Slc28a3 (ENSMAUG00000007466) ENSMAUG00000015268 2210016F16Rik (ENSMAUG00000001833) Kif27 (ENSMAUG00000007799) Gkap1 (ENSMAUG00000009206) Murinae ANCESTRAL SPECIES 21 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Mus ANCESTRAL SPECIES 18 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 Mus_A ANCESTRAL SPECIES 14 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 Mus_B ANCESTRAL SPECIES 13 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 Mus_C ANCESTRAL SPECIES 10 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 Steppe mouse MODERN SPECIES 3363 Ctsj (ENSMSIG00000021739) ##22 Tpbpa (ENSMSIG00000021726) Ctla2a (ENSMSIG00000021719) ##22 Tpbpb (ENSMSIG00000021690) Ctla2b (ENSMSIG00000021665) ##22 4930486L24Rik (ENSMSIG00000021647) ##22 Ctsll3 (ENSMSIG00000021625) ##22 BC051665 (ENSMSIG00000021609) ##22 Dapk1 (ENSMSIG00000021579) ENSMSIG00000021574 ENSMSIG00000021571 Gas1 (ENSMSIG00000021556) Tut7 (ENSMSIG00000021435) ENSMSIG00000021410 1700014D04Rik (ENSMSIG00000021396) Spata31d1d (ENSMSIG00000021387) Spata31d1b (ENSMSIG00000021379) Spata31d1a (ENSMSIG00000021365) 4921517D22Rik (ENSMSIG00000021349) Golm1 (ENSMSIG00000021316) Naa35 (ENSMSIG00000021291) Agtpbp1 (ENSMSIG00000021104) spretus MODERN SPECIES 4 Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Gas1 (MGP_SPRETEiJ_G0019492) Tut7 (MGP_SPRETEiJ_G0019491) MGP_SPRETEiJ_G0019490 1700014D04Rik (MGP_SPRETEiJ_G0019489) Spata31d1d (MGP_SPRETEiJ_G0019488) Spata31d1a (MGP_SPRETEiJ_G0019487) 4921517D22Rik (MGP_SPRETEiJ_G0019486) MGP_SPRETEiJ_G0019485 Naa35 (MGP_SPRETEiJ_G0019484) Agtpbp1 (MGP_SPRETEiJ_G0019483) Ntrk2 (MGP_SPRETEiJ_G0019482) Slc28a3 (MGP_SPRETEiJ_G0019481) Mouse MODERN SPECIES 4 Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Gas1 (ENSMUSG00000052957) Tut7 (ENSMUSG00000035248) Isca1 (ENSMUSG00000044792) 1700014D04Rik (ENSMUSG00000051054) Spata31d1d (ENSMUSG00000043986) Spata31d1b (ENSMUSG00000091311) Spata31d1a (ENSMUSG00000050876) 4921517D22Rik (ENSMUSG00000049902) Golm1 (ENSMUSG00000021556) Naa35 (ENSMUSG00000021555) Agtpbp1 (ENSMUSG00000021557) Ntrk2 (ENSMUSG00000055254) Slc28a3 (ENSMUSG00000021553) Ryukyu mouse MODERN SPECIES 4 Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Gas1 (MGP_CAROLIEiJ_G0018613) Tut7 (MGP_CAROLIEiJ_G0018612) MGP_CAROLIEiJ_G0018611 1700014D04Rik (MGP_CAROLIEiJ_G0018610) Spata31d1d (MGP_CAROLIEiJ_G0018609) MGP_CAROLIEiJ_G0018608 MGP_CAROLIEiJ_G0018607 4921517D22Rik (MGP_CAROLIEiJ_G0018606) Golm1 (MGP_CAROLIEiJ_G0018605) MGP_CAROLIEiJ_G0018604 Agtpbp1 (MGP_CAROLIEiJ_G0018603) Ntrk2 (MGP_CAROLIEiJ_G0018602) Shrew mouse MODERN SPECIES 7 Aopep (MGP_PahariEiJ_G0019696) Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Gas1 (MGP_PahariEiJ_G0019677) Tut7 (MGP_PahariEiJ_G0019676) MGP_PahariEiJ_G0019675 1700014D04Rik (MGP_PahariEiJ_G0019674) Spata31d1d (MGP_PahariEiJ_G0019673) Spata31d1b (MGP_PahariEiJ_G0019672) MGP_PahariEiJ_G0019671 4921517D22Rik (MGP_PahariEiJ_G0019670) Golm1 (MGP_PahariEiJ_G0019669) Naa35 (MGP_PahariEiJ_G0019668) Agtpbp1 (MGP_PahariEiJ_G0019667) Ntrk2 (MGP_PahariEiJ_G0019666) Rat MODERN SPECIES 8 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Dapk1 (ENSRNOG00000018198) Tut7 (ENSRNOG00000016629) Isca1 (ENSRNOG00000018343) AABR07026929.1 (ENSRNOG00000042026) Spata31d1 (ENSRNOG00000027014) Spata31d1b (ENSRNOG00000069288) Spata31d3 (ENSRNOG00000056413) LOC100912252 (ENSRNOG00000042206) Golm1 (ENSRNOG00000018400) Naa35 (ENSRNOG00000018417) ENSRNOG00000064986 Agtpbp1 (ENSRNOG00000018651) Ntrk2 (ENSRNOG00000018839) Slc28a3 (ENSRNOG00000018853) Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.a ENSGT00390000002374 Cricetidae ANCESTRAL SPECIES 22 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.b.a.b ENSGT00390000002374 Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.b.a.b ENSGT00390000002374 Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001008618 Ptch1 (ENSCGRG00001010176) Fancc (ENSCGRG00001013491) Aopep (ENSCGRG00001012713) Fbp1 (ENSCGRG00001009150) Fbp2 (ENSCGRG00001022515) Cts8 (ENSCGRG00001013704) ##22 Cts6 (ENSCGRG00001022925) ##22 Ctsq (ENSCGRG00001002399) ##22 Ctsj (ENSCGRG00001024764) ##22 ENSCGRG00001015895 ##22 ENSCGRG00001024602 ##22 4930486L24Rik (ENSCGRG00001023066) ##22 ENSCGRG00001019274 ##22 ENSCGRG00001014152 ##22 BC051665 (ENSCGRG00001008665) ##22 Dapk1 (ENSCGRG00001000497) Gas1 (ENSCGRG00001010171) Tut7 (ENSCGRG00001020605) ENSCGRG00001007037 1700014D04Rik (ENSCGRG00001022165) Spata31d1d (ENSCGRG00001011836) ENSCGRG00001001460 Golm1 (ENSCGRG00001021525) ENSCGRG00001022085 Agtpbp1 (ENSCGRG00001021345) ENSCGRG00001013499 ENSCGRG00001012376 Slc28a3 (ENSCGRG00001020206) Rmi1 (ENSCGRG00001004591) ENSCGRG00001016951 Golden Hamster MODERN SPECIES 699 Zfp367 (ENSMAUG00000019699) Slc35d2 (ENSMAUG00000016504) Hsd17b3 (ENSMAUG00000018759) Ercc6l2 (ENSMAUG00000004820) Ptch1 (ENSMAUG00000014816) Fancc (ENSMAUG00000012407) Aopep (ENSMAUG00000003279) Fbp1 (ENSMAUG00000015819) Fbp2 (ENSMAUG00000017596) ENSMAUG00000016362 ##22 Cts8 (ENSMAUG00000018878) ##22 Ctsr (ENSMAUG00000014961) ##22 Cts6 (ENSMAUG00000016662) ##22 Ctsj (ENSMAUG00000008852) ##22 Ctsll3 (ENSMAUG00000014374) ##22 BC051665 (ENSMAUG00000012142) ##22 Dapk1 (ENSMAUG00000000180) Gas1 (ENSMAUG00000019435) Tut7 (ENSMAUG00000006963) ENSMAUG00000000645 1700014D04Rik (ENSMAUG00000020029) ENSMAUG00000012538 Naa35 (ENSMAUG00000006704) ENSMAUG00000002599 Ntrk2 (ENSMAUG00000014898) Slc28a3 (ENSMAUG00000007466) ENSMAUG00000015268 2210016F16Rik (ENSMAUG00000001833) Kif27 (ENSMAUG00000007799) Gkap1 (ENSMAUG00000009206) Ubqln1 (ENSMAUG00000009272) Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.a.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.b.a.b ENSGT00940000153434.a.a Prairie vole DUPLICATION Prairie vole MODERN SPECIES 3 Ptch1 (ENSMOCG00000022943) Fancc (ENSMOCG00000001776) Aopep (ENSMOCG00000003056) Fbp1 (ENSMOCG00000014907) Fbp2 (ENSMOCG00000017815) ENSMOCG00000010780 ##22 Cts7 (ENSMOCG00000001845) ##22 Cts8 (ENSMOCG00000005191) ##22 ENSMOCG00000020961 ##22 ENSMOCG00000013109 ##22 ENSMOCG00000000781 ##22 Ctsj (ENSMOCG00000013146) ##22 4930486L24Rik (ENSMOCG00000005874) ##22 ENSMOCG00000019948 ##22 ENSMOCG00000012620 ##22 Dapk1 (ENSMOCG00000016789) Gas1 (ENSMOCG00000002738) ENSMOCG00000022892 ENSMOCG00000007812 ENSMOCG00000000209 ENSMOCG00000000876 4921517D22Rik (ENSMOCG00000022999) ENSMOCG00000019507 Naa35 (ENSMOCG00000013999) Agtpbp1 (ENSMOCG00000014650) Ntrk2 (ENSMOCG00000015461) Slc28a3 (ENSMOCG00000005269) Rmi1 (ENSMOCG00000016761) ENSMOCG00000001446 2210016F16Rik (ENSMOCG00000017857) Prairie vole MODERN SPECIES 3 Ptch1 (ENSMOCG00000022943) Fancc (ENSMOCG00000001776) Aopep (ENSMOCG00000003056) Fbp1 (ENSMOCG00000014907) Fbp2 (ENSMOCG00000017815) ENSMOCG00000010780 ##22 Cts7 (ENSMOCG00000001845) ##22 Cts8 (ENSMOCG00000005191) ##22 ENSMOCG00000020961 ##22 ENSMOCG00000013109 ##22 ENSMOCG00000000781 ##22 Ctsj (ENSMOCG00000013146) ##22 4930486L24Rik (ENSMOCG00000005874) ##22 ENSMOCG00000019948 ##22 ENSMOCG00000012620 ##22 Dapk1 (ENSMOCG00000016789) Gas1 (ENSMOCG00000002738) ENSMOCG00000022892 ENSMOCG00000007812 ENSMOCG00000000209 ENSMOCG00000000876 4921517D22Rik (ENSMOCG00000022999) ENSMOCG00000019507 Naa35 (ENSMOCG00000013999) Agtpbp1 (ENSMOCG00000014650) Ntrk2 (ENSMOCG00000015461) Slc28a3 (ENSMOCG00000005269) Rmi1 (ENSMOCG00000016761) ENSMOCG00000001446 Northern American deer mouse MODERN SPECIES 18 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 BC051665 (ENSPEMG00000025235) ##22 Dapk1 (ENSPEMG00000022627) Gas1 (ENSPEMG00000007789) Tut7 (ENSPEMG00000014030) ENSPEMG00000029941 ENSPEMG00000028848 ENSPEMG00000025105 ENSPEMG00000025782 4921517D22Rik (ENSPEMG00000022165) Golm1 (ENSPEMG00000021119) Naa35 (ENSPEMG00000020283) Agtpbp1 (ENSPEMG00000003465) ENSPEMG00000030036 Ntrk2 (ENSPEMG00000000060) Slc28a3 (ENSPEMG00000016674) Hnrnpk (ENSPEMG00000012825) Murinae ANCESTRAL SPECIES 21 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 Mus ANCESTRAL SPECIES 18 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Mus_A ANCESTRAL SPECIES 14 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Mus_B ANCESTRAL SPECIES 13 ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Mus_C ANCESTRAL SPECIES 10 ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Steppe mouse MODERN SPECIES 3363 Ctsj (ENSMSIG00000021739) ##22 Tpbpa (ENSMSIG00000021726) Ctla2a (ENSMSIG00000021719) ##22 Tpbpb (ENSMSIG00000021690) Ctla2b (ENSMSIG00000021665) ##22 4930486L24Rik (ENSMSIG00000021647) ##22 Ctsll3 (ENSMSIG00000021625) ##22 BC051665 (ENSMSIG00000021609) ##22 Dapk1 (ENSMSIG00000021579) ENSMSIG00000021574 ENSMSIG00000021571 Gas1 (ENSMSIG00000021556) Tut7 (ENSMSIG00000021435) ENSMSIG00000021410 1700014D04Rik (ENSMSIG00000021396) Spata31d1d (ENSMSIG00000021387) Spata31d1b (ENSMSIG00000021379) Spata31d1a (ENSMSIG00000021365) 4921517D22Rik (ENSMSIG00000021349) Golm1 (ENSMSIG00000021316) Naa35 (ENSMSIG00000021291) Agtpbp1 (ENSMSIG00000021104) Ntrk2 (ENSMSIG00000020750) spretus MODERN SPECIES 4 Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Gas1 (MGP_SPRETEiJ_G0019492) Tut7 (MGP_SPRETEiJ_G0019491) MGP_SPRETEiJ_G0019490 1700014D04Rik (MGP_SPRETEiJ_G0019489) Spata31d1d (MGP_SPRETEiJ_G0019488) Spata31d1a (MGP_SPRETEiJ_G0019487) 4921517D22Rik (MGP_SPRETEiJ_G0019486) MGP_SPRETEiJ_G0019485 Naa35 (MGP_SPRETEiJ_G0019484) Agtpbp1 (MGP_SPRETEiJ_G0019483) Ntrk2 (MGP_SPRETEiJ_G0019482) Slc28a3 (MGP_SPRETEiJ_G0019481) Rmi1 (MGP_SPRETEiJ_G0019480) Mouse MODERN SPECIES 4 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Gas1 (ENSMUSG00000052957) Tut7 (ENSMUSG00000035248) Isca1 (ENSMUSG00000044792) 1700014D04Rik (ENSMUSG00000051054) Spata31d1d (ENSMUSG00000043986) Spata31d1b (ENSMUSG00000091311) Spata31d1a (ENSMUSG00000050876) 4921517D22Rik (ENSMUSG00000049902) Golm1 (ENSMUSG00000021556) Naa35 (ENSMUSG00000021555) Agtpbp1 (ENSMUSG00000021557) Ntrk2 (ENSMUSG00000055254) Slc28a3 (ENSMUSG00000021553) Rmi1 (ENSMUSG00000035367) Ryukyu mouse MODERN SPECIES 4 Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Gas1 (MGP_CAROLIEiJ_G0018613) Tut7 (MGP_CAROLIEiJ_G0018612) MGP_CAROLIEiJ_G0018611 1700014D04Rik (MGP_CAROLIEiJ_G0018610) Spata31d1d (MGP_CAROLIEiJ_G0018609) MGP_CAROLIEiJ_G0018608 MGP_CAROLIEiJ_G0018607 4921517D22Rik (MGP_CAROLIEiJ_G0018606) Golm1 (MGP_CAROLIEiJ_G0018605) MGP_CAROLIEiJ_G0018604 Agtpbp1 (MGP_CAROLIEiJ_G0018603) Ntrk2 (MGP_CAROLIEiJ_G0018602) Slc28a3 (MGP_CAROLIEiJ_G0018601) Shrew mouse MODERN SPECIES 7 Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Gas1 (MGP_PahariEiJ_G0019677) Tut7 (MGP_PahariEiJ_G0019676) MGP_PahariEiJ_G0019675 1700014D04Rik (MGP_PahariEiJ_G0019674) Spata31d1d (MGP_PahariEiJ_G0019673) Spata31d1b (MGP_PahariEiJ_G0019672) MGP_PahariEiJ_G0019671 4921517D22Rik (MGP_PahariEiJ_G0019670) Golm1 (MGP_PahariEiJ_G0019669) Naa35 (MGP_PahariEiJ_G0019668) Agtpbp1 (MGP_PahariEiJ_G0019667) Ntrk2 (MGP_PahariEiJ_G0019666) Slc28a3 (MGP_PahariEiJ_G0019665) Rat MODERN SPECIES 8 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Dapk1 (ENSRNOG00000018198) Tut7 (ENSRNOG00000016629) Isca1 (ENSRNOG00000018343) AABR07026929.1 (ENSRNOG00000042026) Spata31d1 (ENSRNOG00000027014) Spata31d1b (ENSRNOG00000069288) Spata31d3 (ENSRNOG00000056413) LOC100912252 (ENSRNOG00000042206) Golm1 (ENSRNOG00000018400) Naa35 (ENSRNOG00000018417) ENSRNOG00000064986 Agtpbp1 (ENSRNOG00000018651) Ntrk2 (ENSRNOG00000018839) Slc28a3 (ENSRNOG00000018853) Rmi1 (ENSRNOG00000019108) Muroidea_A ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.a.a.b ##22 Cricetidae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.a.a.b ##22 Cricetinae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.a.a.b ##22 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001022738 ENSCGRG00001008618 Ptch1 (ENSCGRG00001010176) Fancc (ENSCGRG00001013491) Aopep (ENSCGRG00001012713) Fbp1 (ENSCGRG00001009150) Fbp2 (ENSCGRG00001022515) Cts8 (ENSCGRG00001013704) ##22 Cts6 (ENSCGRG00001022925) ##22 Ctsq (ENSCGRG00001002399) ##22 Ctsj (ENSCGRG00001024764) ##22 ENSCGRG00001015895 ##22 ENSCGRG00001024602 ##22 4930486L24Rik (ENSCGRG00001023066) ##22 ENSCGRG00001019274 ##22 ENSCGRG00001014152 ##22 BC051665 (ENSCGRG00001008665) ##22 Dapk1 (ENSCGRG00001000497) Gas1 (ENSCGRG00001010171) Tut7 (ENSCGRG00001020605) ENSCGRG00001007037 1700014D04Rik (ENSCGRG00001022165) Spata31d1d (ENSCGRG00001011836) ENSCGRG00001001460 Golm1 (ENSCGRG00001021525) ENSCGRG00001022085 Agtpbp1 (ENSCGRG00001021345) ENSCGRG00001013499 ENSCGRG00001012376 Slc28a3 (ENSCGRG00001020206) Rmi1 (ENSCGRG00001004591) Chinese hamster chok1gshd MODERN SPECIES 317 Slc28a3 (ENSCGRG00001020206) ENSCGRG00001012376 ENSCGRG00001013499 Agtpbp1 (ENSCGRG00001021345) ENSCGRG00001022085 Golm1 (ENSCGRG00001021525) ENSCGRG00001001460 Spata31d1d (ENSCGRG00001011836) 1700014D04Rik (ENSCGRG00001022165) ENSCGRG00001007037 Tut7 (ENSCGRG00001020605) Gas1 (ENSCGRG00001010171) Dapk1 (ENSCGRG00001000497) BC051665 (ENSCGRG00001008665) ##22 ENSCGRG00001014152 ##22 ENSCGRG00001019274 ##22 4930486L24Rik (ENSCGRG00001023066) ##22 ENSCGRG00001024602 ##22 ENSCGRG00001015895 ##22 Ctsj (ENSCGRG00001024764) ##22 Ctsq (ENSCGRG00001002399) ##22 Cts6 (ENSCGRG00001022925) ##22 Cts8 (ENSCGRG00001013704) ##22 Fbp2 (ENSCGRG00001022515) Fbp1 (ENSCGRG00001009150) Aopep (ENSCGRG00001012713) Fancc (ENSCGRG00001013491) Ptch1 (ENSCGRG00001010176) ENSCGRG00001008618 ENSCGRG00001022738 Hsd17b3 (ENSCGRG00001009870) Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 Cricetidae ANCESTRAL SPECIES 22 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.a.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 BC051665 (ENSPEMG00000025235) ##22 Dapk1 (ENSPEMG00000022627) Gas1 (ENSPEMG00000007789) Tut7 (ENSPEMG00000014030) ENSPEMG00000029941 ENSPEMG00000028848 ENSPEMG00000025105 ENSPEMG00000025782 4921517D22Rik (ENSPEMG00000022165) Golm1 (ENSPEMG00000021119) Naa35 (ENSPEMG00000020283) Agtpbp1 (ENSPEMG00000003465) ENSPEMG00000030036 Ntrk2 (ENSPEMG00000000060) Prairie vole MODERN SPECIES 3 Ptch1 (ENSMOCG00000022943) Fancc (ENSMOCG00000001776) Aopep (ENSMOCG00000003056) Fbp1 (ENSMOCG00000014907) Fbp2 (ENSMOCG00000017815) ENSMOCG00000010780 ##22 Cts7 (ENSMOCG00000001845) ##22 Cts8 (ENSMOCG00000005191) ##22 ENSMOCG00000020961 ##22 ENSMOCG00000013109 ##22 ENSMOCG00000000781 ##22 Ctsj (ENSMOCG00000013146) ##22 4930486L24Rik (ENSMOCG00000005874) ##22 ENSMOCG00000019948 ##22 ENSMOCG00000012620 ##22 Dapk1 (ENSMOCG00000016789) Gas1 (ENSMOCG00000002738) ENSMOCG00000022892 ENSMOCG00000007812 ENSMOCG00000000209 ENSMOCG00000000876 4921517D22Rik (ENSMOCG00000022999) ENSMOCG00000019507 Naa35 (ENSMOCG00000013999) Agtpbp1 (ENSMOCG00000014650) Ntrk2 (ENSMOCG00000015461) Slc28a3 (ENSMOCG00000005269) Rmi1 (ENSMOCG00000016761) Cricetinae ANCESTRAL SPECIES 20 ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 Chinese hamster chok1gshd MODERN SPECIES 317 Slc35d2 (ENSCGRG00001020192) Hsd17b3 (ENSCGRG00001009870) ENSCGRG00001022738 ENSCGRG00001008618 Ptch1 (ENSCGRG00001010176) Fancc (ENSCGRG00001013491) Aopep (ENSCGRG00001012713) Fbp1 (ENSCGRG00001009150) Fbp2 (ENSCGRG00001022515) Cts8 (ENSCGRG00001013704) ##22 Cts6 (ENSCGRG00001022925) ##22 Ctsq (ENSCGRG00001002399) ##22 Ctsj (ENSCGRG00001024764) ##22 ENSCGRG00001015895 ##22 ENSCGRG00001024602 ##22 4930486L24Rik (ENSCGRG00001023066) ##22 ENSCGRG00001019274 ##22 ENSCGRG00001014152 ##22 BC051665 (ENSCGRG00001008665) ##22 Dapk1 (ENSCGRG00001000497) Gas1 (ENSCGRG00001010171) Tut7 (ENSCGRG00001020605) ENSCGRG00001007037 1700014D04Rik (ENSCGRG00001022165) Spata31d1d (ENSCGRG00001011836) ENSCGRG00001001460 Golm1 (ENSCGRG00001021525) ENSCGRG00001022085 Agtpbp1 (ENSCGRG00001021345) ENSCGRG00001013499 ENSCGRG00001012376 Murinae ANCESTRAL SPECIES 21 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 Mus ANCESTRAL SPECIES 18 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 Mus_A ANCESTRAL SPECIES 14 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 Mus_B ANCESTRAL SPECIES 13 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 Mouse MODERN SPECIES 4 Zfp808 (ENSMUSG00000074867) Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Gas1 (ENSMUSG00000052957) Tut7 (ENSMUSG00000035248) Isca1 (ENSMUSG00000044792) 1700014D04Rik (ENSMUSG00000051054) Spata31d1d (ENSMUSG00000043986) Spata31d1b (ENSMUSG00000091311) Spata31d1a (ENSMUSG00000050876) 4921517D22Rik (ENSMUSG00000049902) Golm1 (ENSMUSG00000021556) Naa35 (ENSMUSG00000021555) Agtpbp1 (ENSMUSG00000021557) Ntrk2 (ENSMUSG00000055254) Mus_C ANCESTRAL SPECIES 10 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 Steppe mouse MODERN SPECIES 3363 Ctsj (ENSMSIG00000021739) ##22 Tpbpa (ENSMSIG00000021726) Ctla2a (ENSMSIG00000021719) ##22 Tpbpb (ENSMSIG00000021690) Ctla2b (ENSMSIG00000021665) ##22 4930486L24Rik (ENSMSIG00000021647) ##22 Ctsll3 (ENSMSIG00000021625) ##22 BC051665 (ENSMSIG00000021609) ##22 Dapk1 (ENSMSIG00000021579) ENSMSIG00000021574 ENSMSIG00000021571 Gas1 (ENSMSIG00000021556) Tut7 (ENSMSIG00000021435) ENSMSIG00000021410 1700014D04Rik (ENSMSIG00000021396) Spata31d1d (ENSMSIG00000021387) Spata31d1b (ENSMSIG00000021379) Spata31d1a (ENSMSIG00000021365) 4921517D22Rik (ENSMSIG00000021349) Golm1 (ENSMSIG00000021316) Naa35 (ENSMSIG00000021291) spretus MODERN SPECIES 4 Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Gas1 (MGP_SPRETEiJ_G0019492) Tut7 (MGP_SPRETEiJ_G0019491) MGP_SPRETEiJ_G0019490 1700014D04Rik (MGP_SPRETEiJ_G0019489) Spata31d1d (MGP_SPRETEiJ_G0019488) Spata31d1a (MGP_SPRETEiJ_G0019487) 4921517D22Rik (MGP_SPRETEiJ_G0019486) MGP_SPRETEiJ_G0019485 Naa35 (MGP_SPRETEiJ_G0019484) Agtpbp1 (MGP_SPRETEiJ_G0019483) Ntrk2 (MGP_SPRETEiJ_G0019482) Ryukyu mouse MODERN SPECIES 4 Fancc (MGP_CAROLIEiJ_G0018633) Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Gas1 (MGP_CAROLIEiJ_G0018613) Tut7 (MGP_CAROLIEiJ_G0018612) MGP_CAROLIEiJ_G0018611 1700014D04Rik (MGP_CAROLIEiJ_G0018610) Spata31d1d (MGP_CAROLIEiJ_G0018609) MGP_CAROLIEiJ_G0018608 MGP_CAROLIEiJ_G0018607 4921517D22Rik (MGP_CAROLIEiJ_G0018606) Golm1 (MGP_CAROLIEiJ_G0018605) MGP_CAROLIEiJ_G0018604 Agtpbp1 (MGP_CAROLIEiJ_G0018603) Shrew mouse MODERN SPECIES 7 Fancc (MGP_PahariEiJ_G0019697) Aopep (MGP_PahariEiJ_G0019696) Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Gas1 (MGP_PahariEiJ_G0019677) Tut7 (MGP_PahariEiJ_G0019676) MGP_PahariEiJ_G0019675 1700014D04Rik (MGP_PahariEiJ_G0019674) Spata31d1d (MGP_PahariEiJ_G0019673) Spata31d1b (MGP_PahariEiJ_G0019672) MGP_PahariEiJ_G0019671 4921517D22Rik (MGP_PahariEiJ_G0019670) Golm1 (MGP_PahariEiJ_G0019669) Naa35 (MGP_PahariEiJ_G0019668) Agtpbp1 (MGP_PahariEiJ_G0019667) Rat MODERN SPECIES 8 Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Dapk1 (ENSRNOG00000018198) Tut7 (ENSRNOG00000016629) Isca1 (ENSRNOG00000018343) AABR07026929.1 (ENSRNOG00000042026) Spata31d1 (ENSRNOG00000027014) Spata31d1b (ENSRNOG00000069288) Spata31d3 (ENSRNOG00000056413) LOC100912252 (ENSRNOG00000042206) Golm1 (ENSRNOG00000018400) Naa35 (ENSRNOG00000018417) ENSRNOG00000064986 Agtpbp1 (ENSRNOG00000018651) Ntrk2 (ENSRNOG00000018839) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 827 Naa35 (ENSNGAG00000012706) ENSNGAG00000010869 ENSNGAG00000006724 ##22 ENSNGAG00000001073 ##22 ENSNGAG00000023443 ##22 ENSNGAG00000023296 ##22 Dapk1 (ENSNGAG00000023610) ENSNGAG00000016586 ENSNGAG00000012268 ENSNGAG00000021770 ENSNGAG00000022758 ENSNGAG00000022920 Upper Galilee mountains blind mole rat MODERN SPECIES 827 Naa35 (ENSNGAG00000012706) ENSNGAG00000010869 ENSNGAG00000006724 ##22 ENSNGAG00000001073 ##22 ENSNGAG00000023443 ##22 ENSNGAG00000023296 ##22 Dapk1 (ENSNGAG00000023610) ENSNGAG00000016586 ENSNGAG00000012268 ENSNGAG00000021770 ENSNGAG00000022758 ENSNGAG00000022920 Muroidea ANCESTRAL SPECIES 72 ENSGT00940000160228 ENSGT00530000069333.a ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b ##22 ENSGT00940000153321.b.b.l.b.a ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a ENSGT00940000161055 ENSGT00940000153434.a.a ENSGT00390000002374 ENSGT00940000157487 Muroidea_A DUPLICATION Muroidea_A DUPLICATION Muroidea_A DUPLICATION Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 Cricetidae ANCESTRAL SPECIES 22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.a.b ENSGT00940000164141 Northern American deer mouse MODERN SPECIES 18 Prxl2c (ENSPEMG00000020672) Cdc14b (ENSPEMG00000020534) ENSPEMG00000021224 Zfp367 (ENSPEMG00000013770) Slc35d2 (ENSPEMG00000021173) Hsd17b3 (ENSPEMG00000021000) ENSPEMG00000006631 Ptch1 (ENSPEMG00000016117) Fancc (ENSPEMG00000022299) Aopep (ENSPEMG00000011169) Fbp1 (ENSPEMG00000020415) Fbp2 (ENSPEMG00000003200) ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 BC051665 (ENSPEMG00000025235) ##22 Prairie vole MODERN SPECIES 3 Ptch1 (ENSMOCG00000022943) Fancc (ENSMOCG00000001776) Aopep (ENSMOCG00000003056) Fbp1 (ENSMOCG00000014907) Fbp2 (ENSMOCG00000017815) ENSMOCG00000010780 ##22 Cts7 (ENSMOCG00000001845) ##22 Cts8 (ENSMOCG00000005191) ##22 ENSMOCG00000020961 ##22 ENSMOCG00000013109 ##22 ENSMOCG00000000781 ##22 Ctsj (ENSMOCG00000013146) ##22 4930486L24Rik (ENSMOCG00000005874) ##22 ENSMOCG00000019948 ##22 ENSMOCG00000012620 ##22 Dapk1 (ENSMOCG00000016789) Gas1 (ENSMOCG00000002738) ENSMOCG00000022892 ENSMOCG00000007812 ENSMOCG00000000209 ENSMOCG00000000876 4921517D22Rik (ENSMOCG00000022999) ENSMOCG00000019507 Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b Chinese hamster chok1gshd MODERN SPECIES 317 Ctsl (ENSCGRG00001023416) #22 Prxl2c (ENSCGRG00001003859) ENSCGRG00001002667 Cdc14b (ENSCGRG00001019066) Habp4 (ENSCGRG00001025040) Zfp367 (ENSCGRG00001022531) Slc35d2 (ENSCGRG00001020192) Hsd17b3 (ENSCGRG00001009870) ENSCGRG00001022738 ENSCGRG00001008618 Ptch1 (ENSCGRG00001010176) Fancc (ENSCGRG00001013491) Aopep (ENSCGRG00001012713) Fbp1 (ENSCGRG00001009150) Fbp2 (ENSCGRG00001022515) Cts8 (ENSCGRG00001013704) ##22 Cts6 (ENSCGRG00001022925) ##22 Ctsq (ENSCGRG00001002399) ##22 Ctsj (ENSCGRG00001024764) ##22 ENSCGRG00001015895 ##22 ENSCGRG00001024602 ##22 4930486L24Rik (ENSCGRG00001023066) ##22 ENSCGRG00001019274 ##22 ENSCGRG00001014152 ##22 BC051665 (ENSCGRG00001008665) ##22 Dapk1 (ENSCGRG00001000497) Gas1 (ENSCGRG00001010171) Tut7 (ENSCGRG00001020605) ENSCGRG00001007037 1700014D04Rik (ENSCGRG00001022165) Spata31d1d (ENSCGRG00001011836) Golden Hamster MODERN SPECIES 699 Cdk20 (ENSMAUG00000001239) Ctsv (ENSMAUG00000000661) Prxl2c (ENSMAUG00000007262) Cdc14b (ENSMAUG00000002176) Habp4 (ENSMAUG00000020977) Zfp367 (ENSMAUG00000019699) Slc35d2 (ENSMAUG00000016504) Hsd17b3 (ENSMAUG00000018759) Ercc6l2 (ENSMAUG00000004820) Ptch1 (ENSMAUG00000014816) Fancc (ENSMAUG00000012407) Aopep (ENSMAUG00000003279) Fbp1 (ENSMAUG00000015819) Fbp2 (ENSMAUG00000017596) ENSMAUG00000016362 ##22 Cts8 (ENSMAUG00000018878) ##22 Ctsr (ENSMAUG00000014961) ##22 Cts6 (ENSMAUG00000016662) ##22 Ctsj (ENSMAUG00000008852) ##22 Ctsll3 (ENSMAUG00000014374) ##22 BC051665 (ENSMAUG00000012142) ##22 Dapk1 (ENSMAUG00000000180) Gas1 (ENSMAUG00000019435) Tut7 (ENSMAUG00000006963) ENSMAUG00000000645 1700014D04Rik (ENSMAUG00000020029) ENSMAUG00000012538 Naa35 (ENSMAUG00000006704) ENSMAUG00000002599 Ntrk2 (ENSMAUG00000014898) Slc28a3 (ENSMAUG00000007466) Murinae ANCESTRAL SPECIES 21 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b Rat DUPLICATION Rat MODERN SPECIES 8 ENSRNOG00000068622 LOC102552000 (ENSRNOG00000068835) LOC102552000 (ENSRNOG00000070106) ENSRNOG00000065506 LOC102549249 (ENSRNOG00000063621) ENSRNOG00000064579 LOC102549249 (ENSRNOG00000067517) AABR07028805.1 (ENSRNOG00000040024) LOC102555902 (ENSRNOG00000068265) ENSRNOG00000063185 LOC108348224 (ENSRNOG00000062387) Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Dapk1 (ENSRNOG00000018198) Tut7 (ENSRNOG00000016629) Rat MODERN SPECIES 8 ENSRNOG00000063205 ENSRNOG00000068622 LOC102552000 (ENSRNOG00000068835) LOC102552000 (ENSRNOG00000070106) ENSRNOG00000065506 LOC102549249 (ENSRNOG00000063621) ENSRNOG00000064579 LOC102549249 (ENSRNOG00000067517) AABR07028805.1 (ENSRNOG00000040024) LOC102555902 (ENSRNOG00000068265) ENSRNOG00000063185 LOC108348224 (ENSRNOG00000062387) Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Dapk1 (ENSRNOG00000018198) Mus ANCESTRAL SPECIES 18 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b Mus_A ANCESTRAL SPECIES 14 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 Mus_B ANCESTRAL SPECIES 13 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 Mus_C ANCESTRAL SPECIES 10 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 spretus MODERN SPECIES 4 Prxl2c (MGP_SPRETEiJ_G0019521) Cdc14b (MGP_SPRETEiJ_G0019520) Habp4 (MGP_SPRETEiJ_G0019519) Zfp367 (MGP_SPRETEiJ_G0019518) Slc35d2 (MGP_SPRETEiJ_G0019517) Hsd17b3 (MGP_SPRETEiJ_G0019516) MGP_SPRETEiJ_G0019515 Ptch1 (MGP_SPRETEiJ_G0019514) Fancc (MGP_SPRETEiJ_G0019513) Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Gas1 (MGP_SPRETEiJ_G0019492) Tut7 (MGP_SPRETEiJ_G0019491) Steppe mouse MODERN SPECIES 2052 Cts7 (ENSMSIG00000015541) ##22 Cts8 (ENSMSIG00000015619) ##22 Cts6 (ENSMSIG00000015627) ##22 Ctsr (ENSMSIG00000015645) ##22 Mouse MODERN SPECIES 4 Aopep (ENSMUSG00000021458) Fbp1 (ENSMUSG00000069805) Fbp2 (ENSMUSG00000021456) Gm5141 (ENSMUSG00000091183) Platr25 (ENSMUSG00000074863) 6720489N17Rik (ENSMUSG00000072066) Zfp934 (ENSMUSG00000074865) Gm49359 (ENSMUSG00000055228) Zfp935 (ENSMUSG00000113450) Gm3604 (ENSMUSG00000094942) Zfp808 (ENSMUSG00000074867) Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Gas1 (ENSMUSG00000052957) Tut7 (ENSMUSG00000035248) Ryukyu mouse MODERN SPECIES 4 Prxl2c (MGP_CAROLIEiJ_G0018641) Cdc14b (MGP_CAROLIEiJ_G0018640) Habp4 (MGP_CAROLIEiJ_G0018639) Zfp367 (MGP_CAROLIEiJ_G0018638) Slc35d2 (MGP_CAROLIEiJ_G0018637) Hsd17b3 (MGP_CAROLIEiJ_G0018636) MGP_CAROLIEiJ_G0018635 Ptch1 (MGP_CAROLIEiJ_G0018634) Fancc (MGP_CAROLIEiJ_G0018633) Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Gas1 (MGP_CAROLIEiJ_G0018613) Tut7 (MGP_CAROLIEiJ_G0018612) MGP_CAROLIEiJ_G0018611 Shrew mouse MODERN SPECIES 7 Prxl2c (MGP_PahariEiJ_G0019705) Cdc14b (MGP_PahariEiJ_G0019704) Habp4 (MGP_PahariEiJ_G0019703) Zfp367 (MGP_PahariEiJ_G0019702) Slc35d2 (MGP_PahariEiJ_G0019701) Hsd17b3 (MGP_PahariEiJ_G0019700) MGP_PahariEiJ_G0019699 Ptch1 (MGP_PahariEiJ_G0019698) Fancc (MGP_PahariEiJ_G0019697) Aopep (MGP_PahariEiJ_G0019696) Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Gas1 (MGP_PahariEiJ_G0019677) Tut7 (MGP_PahariEiJ_G0019676) MGP_PahariEiJ_G0019675 Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b Murinae DUPLICATION Murinae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.b.a.a.b.a ##22 Rat MODERN SPECIES 8 Fbp2 (ENSRNOG00000017637) ENSRNOG00000065205 ENSRNOG00000063205 ENSRNOG00000068622 LOC102552000 (ENSRNOG00000068835) LOC102552000 (ENSRNOG00000070106) ENSRNOG00000065506 LOC102549249 (ENSRNOG00000063621) ENSRNOG00000064579 LOC102549249 (ENSRNOG00000067517) AABR07028805.1 (ENSRNOG00000040024) LOC102555902 (ENSRNOG00000068265) ENSRNOG00000063185 LOC108348224 (ENSRNOG00000062387) Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 Mus ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.b.a.a.b.a ##22 Mus_A ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.b.a.a.b.a ##22 Mus_B ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.b.a.a.b.a ##22 Mus_C ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.b.a.a.b.a ##22 Steppe mouse MODERN SPECIES 1423 ENSMSIG00000013394 ##22 ENSMSIG00000013445 ##22 Murinae ANCESTRAL SPECIES 21 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b Mus ANCESTRAL SPECIES 18 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 Mus_A ANCESTRAL SPECIES 14 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 Mus_B ANCESTRAL SPECIES 13 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a Mouse MODERN SPECIES 4 Fancc (ENSMUSG00000021461) Aopep (ENSMUSG00000021458) Fbp1 (ENSMUSG00000069805) Fbp2 (ENSMUSG00000021456) Gm5141 (ENSMUSG00000091183) Platr25 (ENSMUSG00000074863) 6720489N17Rik (ENSMUSG00000072066) Zfp934 (ENSMUSG00000074865) Gm49359 (ENSMUSG00000055228) Zfp935 (ENSMUSG00000113450) Gm3604 (ENSMUSG00000094942) Zfp808 (ENSMUSG00000074867) Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Gas1 (ENSMUSG00000052957) Mus_C ANCESTRAL SPECIES 10 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a Steppe mouse MODERN SPECIES 2052 Cts7 (ENSMSIG00000015541) ##22 Cts8 (ENSMSIG00000015619) ##22 Cts6 (ENSMSIG00000015627) ##22 Ctsr (ENSMSIG00000015645) ##22 spretus MODERN SPECIES 4 Ctsl (MGP_SPRETEiJ_G0019522) #22 Prxl2c (MGP_SPRETEiJ_G0019521) Cdc14b (MGP_SPRETEiJ_G0019520) Habp4 (MGP_SPRETEiJ_G0019519) Zfp367 (MGP_SPRETEiJ_G0019518) Slc35d2 (MGP_SPRETEiJ_G0019517) Hsd17b3 (MGP_SPRETEiJ_G0019516) MGP_SPRETEiJ_G0019515 Ptch1 (MGP_SPRETEiJ_G0019514) Fancc (MGP_SPRETEiJ_G0019513) Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Gas1 (MGP_SPRETEiJ_G0019492) Ryukyu mouse MODERN SPECIES 4 Ctsl (MGP_CAROLIEiJ_G0018642) #22 Prxl2c (MGP_CAROLIEiJ_G0018641) Cdc14b (MGP_CAROLIEiJ_G0018640) Habp4 (MGP_CAROLIEiJ_G0018639) Zfp367 (MGP_CAROLIEiJ_G0018638) Slc35d2 (MGP_CAROLIEiJ_G0018637) Hsd17b3 (MGP_CAROLIEiJ_G0018636) MGP_CAROLIEiJ_G0018635 Ptch1 (MGP_CAROLIEiJ_G0018634) Fancc (MGP_CAROLIEiJ_G0018633) Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Gas1 (MGP_CAROLIEiJ_G0018613) Tut7 (MGP_CAROLIEiJ_G0018612) Shrew mouse MODERN SPECIES 7 MGP_PahariEiJ_G0019706 Prxl2c (MGP_PahariEiJ_G0019705) Cdc14b (MGP_PahariEiJ_G0019704) Habp4 (MGP_PahariEiJ_G0019703) Zfp367 (MGP_PahariEiJ_G0019702) Slc35d2 (MGP_PahariEiJ_G0019701) Hsd17b3 (MGP_PahariEiJ_G0019700) MGP_PahariEiJ_G0019699 Ptch1 (MGP_PahariEiJ_G0019698) Fancc (MGP_PahariEiJ_G0019697) Aopep (MGP_PahariEiJ_G0019696) Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Gas1 (MGP_PahariEiJ_G0019677) Tut7 (MGP_PahariEiJ_G0019676) Rat MODERN SPECIES 8 ENSRNOG00000065205 ENSRNOG00000063205 ENSRNOG00000068622 LOC102552000 (ENSRNOG00000068835) LOC102552000 (ENSRNOG00000070106) ENSRNOG00000065506 LOC102549249 (ENSRNOG00000063621) ENSRNOG00000064579 LOC102549249 (ENSRNOG00000067517) AABR07028805.1 (ENSRNOG00000040024) LOC102555902 (ENSRNOG00000068265) ENSRNOG00000063185 LOC108348224 (ENSRNOG00000062387) Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Cricetidae ANCESTRAL SPECIES 22 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 Golden Hamster MODERN SPECIES 699 Fam240b (ENSMAUG00000003441) Cdk20 (ENSMAUG00000001239) Ctsv (ENSMAUG00000000661) Prxl2c (ENSMAUG00000007262) Cdc14b (ENSMAUG00000002176) Habp4 (ENSMAUG00000020977) Zfp367 (ENSMAUG00000019699) Slc35d2 (ENSMAUG00000016504) Hsd17b3 (ENSMAUG00000018759) Ercc6l2 (ENSMAUG00000004820) Ptch1 (ENSMAUG00000014816) Fancc (ENSMAUG00000012407) Aopep (ENSMAUG00000003279) Fbp1 (ENSMAUG00000015819) Fbp2 (ENSMAUG00000017596) ENSMAUG00000016362 ##22 Cts8 (ENSMAUG00000018878) ##22 Ctsr (ENSMAUG00000014961) ##22 Cts6 (ENSMAUG00000016662) ##22 Ctsj (ENSMAUG00000008852) ##22 Ctsll3 (ENSMAUG00000014374) ##22 BC051665 (ENSMAUG00000012142) ##22 Dapk1 (ENSMAUG00000000180) Gas1 (ENSMAUG00000019435) Tut7 (ENSMAUG00000006963) ENSMAUG00000000645 1700014D04Rik (ENSMAUG00000020029) ENSMAUG00000012538 Naa35 (ENSMAUG00000006704) ENSMAUG00000002599 Ntrk2 (ENSMAUG00000014898) Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.a.b Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 18 Ctsl (ENSPEMG00000021285) #22 ENSPEMG00000021037 Prxl2c (ENSPEMG00000020672) Cdc14b (ENSPEMG00000020534) ENSPEMG00000021224 Zfp367 (ENSPEMG00000013770) Slc35d2 (ENSPEMG00000021173) Hsd17b3 (ENSPEMG00000021000) ENSPEMG00000006631 Ptch1 (ENSPEMG00000016117) Fancc (ENSPEMG00000022299) Aopep (ENSPEMG00000011169) Fbp1 (ENSPEMG00000020415) Fbp2 (ENSPEMG00000003200) ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000021037 Prxl2c (ENSPEMG00000020672) Cdc14b (ENSPEMG00000020534) ENSPEMG00000021224 Zfp367 (ENSPEMG00000013770) Slc35d2 (ENSPEMG00000021173) Hsd17b3 (ENSPEMG00000021000) ENSPEMG00000006631 Ptch1 (ENSPEMG00000016117) Fancc (ENSPEMG00000022299) Aopep (ENSPEMG00000011169) Fbp1 (ENSPEMG00000020415) Fbp2 (ENSPEMG00000003200) ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 Prairie vole MODERN SPECIES 3 Ptch1 (ENSMOCG00000022943) Fancc (ENSMOCG00000001776) Aopep (ENSMOCG00000003056) Fbp1 (ENSMOCG00000014907) Fbp2 (ENSMOCG00000017815) ENSMOCG00000010780 ##22 Cts7 (ENSMOCG00000001845) ##22 Cts8 (ENSMOCG00000005191) ##22 ENSMOCG00000020961 ##22 ENSMOCG00000013109 ##22 ENSMOCG00000000781 ##22 Ctsj (ENSMOCG00000013146) ##22 4930486L24Rik (ENSMOCG00000005874) ##22 ENSMOCG00000019948 ##22 ENSMOCG00000012620 ##22 Dapk1 (ENSMOCG00000016789) Gas1 (ENSMOCG00000002738) ENSMOCG00000022892 ENSMOCG00000007812 ENSMOCG00000000209 ENSMOCG00000000876 4921517D22Rik (ENSMOCG00000022999) Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b Cricetidae ANCESTRAL SPECIES 22 ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b Prairie vole MODERN SPECIES 3 Ptch1 (ENSMOCG00000022943) Fancc (ENSMOCG00000001776) Aopep (ENSMOCG00000003056) Fbp1 (ENSMOCG00000014907) Fbp2 (ENSMOCG00000017815) ENSMOCG00000010780 ##22 Cts7 (ENSMOCG00000001845) ##22 Cts8 (ENSMOCG00000005191) ##22 ENSMOCG00000020961 ##22 ENSMOCG00000013109 ##22 ENSMOCG00000000781 ##22 Ctsj (ENSMOCG00000013146) ##22 4930486L24Rik (ENSMOCG00000005874) ##22 ENSMOCG00000019948 ##22 ENSMOCG00000012620 ##22 Dapk1 (ENSMOCG00000016789) Gas1 (ENSMOCG00000002738) ENSMOCG00000022892 ENSMOCG00000007812 ENSMOCG00000000209 ENSMOCG00000000876 Northern American deer mouse MODERN SPECIES 18 Cdk20 (ENSPEMG00000023165) Ctsl (ENSPEMG00000021285) #22 ENSPEMG00000021037 Prxl2c (ENSPEMG00000020672) Cdc14b (ENSPEMG00000020534) ENSPEMG00000021224 Zfp367 (ENSPEMG00000013770) Slc35d2 (ENSPEMG00000021173) Hsd17b3 (ENSPEMG00000021000) ENSPEMG00000006631 Ptch1 (ENSPEMG00000016117) Fancc (ENSPEMG00000022299) Aopep (ENSPEMG00000011169) Fbp1 (ENSPEMG00000020415) Fbp2 (ENSPEMG00000003200) ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 Murinae ANCESTRAL SPECIES 21 ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 Mus DUPLICATION Mus ANCESTRAL SPECIES 18 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 Mus_A ANCESTRAL SPECIES 14 ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a Ryukyu mouse MODERN SPECIES 4 Cdk20 (MGP_CAROLIEiJ_G0018643) Ctsl (MGP_CAROLIEiJ_G0018642) #22 Prxl2c (MGP_CAROLIEiJ_G0018641) Cdc14b (MGP_CAROLIEiJ_G0018640) Habp4 (MGP_CAROLIEiJ_G0018639) Zfp367 (MGP_CAROLIEiJ_G0018638) Slc35d2 (MGP_CAROLIEiJ_G0018637) Hsd17b3 (MGP_CAROLIEiJ_G0018636) MGP_CAROLIEiJ_G0018635 Ptch1 (MGP_CAROLIEiJ_G0018634) Fancc (MGP_CAROLIEiJ_G0018633) Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Gas1 (MGP_CAROLIEiJ_G0018613) Mus_B ANCESTRAL SPECIES 13 ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 Mouse MODERN SPECIES 4 Ptch1 (ENSMUSG00000021466) Fancc (ENSMUSG00000021461) Aopep (ENSMUSG00000021458) Fbp1 (ENSMUSG00000069805) Fbp2 (ENSMUSG00000021456) Gm5141 (ENSMUSG00000091183) Platr25 (ENSMUSG00000074863) 6720489N17Rik (ENSMUSG00000072066) Zfp934 (ENSMUSG00000074865) Gm49359 (ENSMUSG00000055228) Zfp935 (ENSMUSG00000113450) Gm3604 (ENSMUSG00000094942) Zfp808 (ENSMUSG00000074867) Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Mus_C ANCESTRAL SPECIES 10 ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 spretus MODERN SPECIES 4 Cdk20 (MGP_SPRETEiJ_G0019523) Ctsl (MGP_SPRETEiJ_G0019522) #22 Prxl2c (MGP_SPRETEiJ_G0019521) Cdc14b (MGP_SPRETEiJ_G0019520) Habp4 (MGP_SPRETEiJ_G0019519) Zfp367 (MGP_SPRETEiJ_G0019518) Slc35d2 (MGP_SPRETEiJ_G0019517) Hsd17b3 (MGP_SPRETEiJ_G0019516) MGP_SPRETEiJ_G0019515 Ptch1 (MGP_SPRETEiJ_G0019514) Fancc (MGP_SPRETEiJ_G0019513) Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Steppe mouse MODERN SPECIES 1423 ENSMSIG00000013394 ##22 ENSMSIG00000013445 ##22 Shrew mouse MODERN SPECIES 7 Cdk20 (MGP_PahariEiJ_G0019707) MGP_PahariEiJ_G0019706 Prxl2c (MGP_PahariEiJ_G0019705) Cdc14b (MGP_PahariEiJ_G0019704) Habp4 (MGP_PahariEiJ_G0019703) Zfp367 (MGP_PahariEiJ_G0019702) Slc35d2 (MGP_PahariEiJ_G0019701) Hsd17b3 (MGP_PahariEiJ_G0019700) MGP_PahariEiJ_G0019699 Ptch1 (MGP_PahariEiJ_G0019698) Fancc (MGP_PahariEiJ_G0019697) Aopep (MGP_PahariEiJ_G0019696) Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Gas1 (MGP_PahariEiJ_G0019677) Mus ANCESTRAL SPECIES 18 ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a Mus_A ANCESTRAL SPECIES 14 ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 Mus_B ANCESTRAL SPECIES 13 ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b Mouse MODERN SPECIES 4 Hsd17b3 (ENSMUSG00000033122) Ercc6l2 (ENSMUSG00000021470) Ptch1 (ENSMUSG00000021466) Fancc (ENSMUSG00000021461) Aopep (ENSMUSG00000021458) Fbp1 (ENSMUSG00000069805) Fbp2 (ENSMUSG00000021456) Gm5141 (ENSMUSG00000091183) Platr25 (ENSMUSG00000074863) 6720489N17Rik (ENSMUSG00000072066) Zfp934 (ENSMUSG00000074865) Gm49359 (ENSMUSG00000055228) Zfp935 (ENSMUSG00000113450) Gm3604 (ENSMUSG00000094942) Zfp808 (ENSMUSG00000074867) Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 Mus_C ANCESTRAL SPECIES 10 ENSGT00530000069333.a ENSGT00940000159128 ENSGT00940000153321.b.b.l.a #22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b Steppe mouse MODERN SPECIES 2096 ENSMSIG00000022180 ENSMSIG00000022191 Cts3 (ENSMSIG00000022207) ##22 ENSMSIG00000022241 spretus MODERN SPECIES 4 Fam240b (MGP_SPRETEiJ_G0019524) Cdk20 (MGP_SPRETEiJ_G0019523) Ctsl (MGP_SPRETEiJ_G0019522) #22 Prxl2c (MGP_SPRETEiJ_G0019521) Cdc14b (MGP_SPRETEiJ_G0019520) Habp4 (MGP_SPRETEiJ_G0019519) Zfp367 (MGP_SPRETEiJ_G0019518) Slc35d2 (MGP_SPRETEiJ_G0019517) Hsd17b3 (MGP_SPRETEiJ_G0019516) MGP_SPRETEiJ_G0019515 Ptch1 (MGP_SPRETEiJ_G0019514) Fancc (MGP_SPRETEiJ_G0019513) Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) Ryukyu mouse MODERN SPECIES 4 Fam240b (MGP_CAROLIEiJ_G0018644) Cdk20 (MGP_CAROLIEiJ_G0018643) Ctsl (MGP_CAROLIEiJ_G0018642) #22 Prxl2c (MGP_CAROLIEiJ_G0018641) Cdc14b (MGP_CAROLIEiJ_G0018640) Habp4 (MGP_CAROLIEiJ_G0018639) Zfp367 (MGP_CAROLIEiJ_G0018638) Slc35d2 (MGP_CAROLIEiJ_G0018637) Hsd17b3 (MGP_CAROLIEiJ_G0018636) MGP_CAROLIEiJ_G0018635 Ptch1 (MGP_CAROLIEiJ_G0018634) Fancc (MGP_CAROLIEiJ_G0018633) Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Shrew mouse MODERN SPECIES 7 Fam240b (MGP_PahariEiJ_G0019708) Cdk20 (MGP_PahariEiJ_G0019707) MGP_PahariEiJ_G0019706 Prxl2c (MGP_PahariEiJ_G0019705) Cdc14b (MGP_PahariEiJ_G0019704) Habp4 (MGP_PahariEiJ_G0019703) Zfp367 (MGP_PahariEiJ_G0019702) Slc35d2 (MGP_PahariEiJ_G0019701) Hsd17b3 (MGP_PahariEiJ_G0019700) MGP_PahariEiJ_G0019699 Ptch1 (MGP_PahariEiJ_G0019698) Fancc (MGP_PahariEiJ_G0019697) Aopep (MGP_PahariEiJ_G0019696) Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Rat DUPLICATION Rat MODERN SPECIES 8 Fbp1 (ENSRNOG00000017597) Fbp2 (ENSRNOG00000017637) ENSRNOG00000065205 ENSRNOG00000063205 ENSRNOG00000068622 LOC102552000 (ENSRNOG00000068835) LOC102552000 (ENSRNOG00000070106) ENSRNOG00000065506 LOC102549249 (ENSRNOG00000063621) ENSRNOG00000064579 LOC102549249 (ENSRNOG00000067517) AABR07028805.1 (ENSRNOG00000040024) LOC102555902 (ENSRNOG00000068265) ENSRNOG00000063185 LOC108348224 (ENSRNOG00000062387) Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Rat MODERN SPECIES 8 Naa35 (ENSRNOG00000018417) Golm1 (ENSRNOG00000018400) LOC100912252 (ENSRNOG00000042206) Spata31d3 (ENSRNOG00000056413) Spata31d1b (ENSRNOG00000069288) Spata31d1 (ENSRNOG00000027014) AABR07026929.1 (ENSRNOG00000042026) Isca1 (ENSRNOG00000018343) Tut7 (ENSRNOG00000016629) Dapk1 (ENSRNOG00000018198) RGD1308751 (ENSRNOG00000039954) ##22 Ctsll3 (ENSRNOG00000069877) ##22 Testin (ENSRNOG00000018028) ##22 Ctla2a (ENSRNOG00000039971) ##22 Tpbpa (ENSRNOG00000039975) RGD1564827 (ENSRNOG00000069712) ##22 Ctsj (ENSRNOG00000046476) ##22 Ctsql2 (ENSRNOG00000017946) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsq (ENSRNOG00000048693) ##22 AABR07043347.1 (ENSRNOG00000051410) MGC114246 (ENSRNOG00000039990) ##22 Ctsr (ENSRNOG00000017888) ##22 Cts8 (ENSRNOG00000040000) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts7 (ENSRNOG00000033540) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Ctsm (ENSRNOG00000065730) ##22 LOC108348224 (ENSRNOG00000062387) ENSRNOG00000063185 LOC102555902 (ENSRNOG00000068265) Muroidea_A DUPLICATION Muroidea_A DUPLICATION Muroidea_A DUPLICATION Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 Cricetidae ANCESTRAL SPECIES 22 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.a.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000021224 Zfp367 (ENSPEMG00000013770) Slc35d2 (ENSPEMG00000021173) Hsd17b3 (ENSPEMG00000021000) ENSPEMG00000006631 Ptch1 (ENSPEMG00000016117) Fancc (ENSPEMG00000022299) Aopep (ENSPEMG00000011169) Fbp1 (ENSPEMG00000020415) Fbp2 (ENSPEMG00000003200) ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 BC051665 (ENSPEMG00000025235) ##22 Dapk1 (ENSPEMG00000022627) Gas1 (ENSPEMG00000007789) Cricetinae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 Golden Hamster MODERN SPECIES 699 Ctsv (ENSMAUG00000000661) Prxl2c (ENSMAUG00000007262) Cdc14b (ENSMAUG00000002176) Habp4 (ENSMAUG00000020977) Zfp367 (ENSMAUG00000019699) Slc35d2 (ENSMAUG00000016504) Hsd17b3 (ENSMAUG00000018759) Ercc6l2 (ENSMAUG00000004820) Ptch1 (ENSMAUG00000014816) Fancc (ENSMAUG00000012407) Aopep (ENSMAUG00000003279) Fbp1 (ENSMAUG00000015819) Fbp2 (ENSMAUG00000017596) ENSMAUG00000016362 ##22 Cts8 (ENSMAUG00000018878) ##22 Ctsr (ENSMAUG00000014961) ##22 Cts6 (ENSMAUG00000016662) ##22 Ctsj (ENSMAUG00000008852) ##22 Ctsll3 (ENSMAUG00000014374) ##22 BC051665 (ENSMAUG00000012142) ##22 Dapk1 (ENSMAUG00000000180) Gas1 (ENSMAUG00000019435) Tut7 (ENSMAUG00000006963) ENSMAUG00000000645 1700014D04Rik (ENSMAUG00000020029) ENSMAUG00000012538 Naa35 (ENSMAUG00000006704) ENSMAUG00000002599 Ntrk2 (ENSMAUG00000014898) Slc28a3 (ENSMAUG00000007466) ENSMAUG00000015268 Murinae ANCESTRAL SPECIES 21 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b Mus ANCESTRAL SPECIES 18 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a Mus_A ANCESTRAL SPECIES 14 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b Mus_B ANCESTRAL SPECIES 13 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b Mus_C ANCESTRAL SPECIES 10 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b Steppe mouse MODERN SPECIES 2052 Cts7 (ENSMSIG00000015541) ##22 Cts8 (ENSMSIG00000015619) ##22 Cts6 (ENSMSIG00000015627) ##22 Ctsr (ENSMSIG00000015645) ##22 spretus MODERN SPECIES 4 Habp4 (MGP_SPRETEiJ_G0019519) Zfp367 (MGP_SPRETEiJ_G0019518) Slc35d2 (MGP_SPRETEiJ_G0019517) Hsd17b3 (MGP_SPRETEiJ_G0019516) MGP_SPRETEiJ_G0019515 Ptch1 (MGP_SPRETEiJ_G0019514) Fancc (MGP_SPRETEiJ_G0019513) Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Gas1 (MGP_SPRETEiJ_G0019492) Tut7 (MGP_SPRETEiJ_G0019491) MGP_SPRETEiJ_G0019490 1700014D04Rik (MGP_SPRETEiJ_G0019489) Mouse MODERN SPECIES 4 Fbp2 (ENSMUSG00000021456) Gm5141 (ENSMUSG00000091183) Platr25 (ENSMUSG00000074863) 6720489N17Rik (ENSMUSG00000072066) Zfp934 (ENSMUSG00000074865) Gm49359 (ENSMUSG00000055228) Zfp935 (ENSMUSG00000113450) Gm3604 (ENSMUSG00000094942) Zfp808 (ENSMUSG00000074867) Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Gas1 (ENSMUSG00000052957) Tut7 (ENSMUSG00000035248) Isca1 (ENSMUSG00000044792) 1700014D04Rik (ENSMUSG00000051054) Ryukyu mouse MODERN SPECIES 4 Habp4 (MGP_CAROLIEiJ_G0018639) Zfp367 (MGP_CAROLIEiJ_G0018638) Slc35d2 (MGP_CAROLIEiJ_G0018637) Hsd17b3 (MGP_CAROLIEiJ_G0018636) MGP_CAROLIEiJ_G0018635 Ptch1 (MGP_CAROLIEiJ_G0018634) Fancc (MGP_CAROLIEiJ_G0018633) Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Gas1 (MGP_CAROLIEiJ_G0018613) Tut7 (MGP_CAROLIEiJ_G0018612) MGP_CAROLIEiJ_G0018611 1700014D04Rik (MGP_CAROLIEiJ_G0018610) Spata31d1d (MGP_CAROLIEiJ_G0018609) Shrew mouse MODERN SPECIES 7 Habp4 (MGP_PahariEiJ_G0019703) Zfp367 (MGP_PahariEiJ_G0019702) Slc35d2 (MGP_PahariEiJ_G0019701) Hsd17b3 (MGP_PahariEiJ_G0019700) MGP_PahariEiJ_G0019699 Ptch1 (MGP_PahariEiJ_G0019698) Fancc (MGP_PahariEiJ_G0019697) Aopep (MGP_PahariEiJ_G0019696) Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Gas1 (MGP_PahariEiJ_G0019677) Tut7 (MGP_PahariEiJ_G0019676) MGP_PahariEiJ_G0019675 1700014D04Rik (MGP_PahariEiJ_G0019674) Spata31d1d (MGP_PahariEiJ_G0019673) Rat MODERN SPECIES 8 LOC102552000 (ENSRNOG00000070106) ENSRNOG00000065506 LOC102549249 (ENSRNOG00000063621) ENSRNOG00000064579 LOC102549249 (ENSRNOG00000067517) AABR07028805.1 (ENSRNOG00000040024) LOC102555902 (ENSRNOG00000068265) ENSRNOG00000063185 LOC108348224 (ENSRNOG00000062387) Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Dapk1 (ENSRNOG00000018198) Tut7 (ENSRNOG00000016629) Isca1 (ENSRNOG00000018343) AABR07026929.1 (ENSRNOG00000042026) Muroidea_A ANCESTRAL SPECIES 14 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b Cricetidae ANCESTRAL SPECIES 22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000154367.a ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 Chinese hamster chok1gshd MODERN SPECIES 317 Prxl2c (ENSCGRG00001003859) ENSCGRG00001002667 Cdc14b (ENSCGRG00001019066) Habp4 (ENSCGRG00001025040) Zfp367 (ENSCGRG00001022531) Slc35d2 (ENSCGRG00001020192) Hsd17b3 (ENSCGRG00001009870) ENSCGRG00001022738 ENSCGRG00001008618 Ptch1 (ENSCGRG00001010176) Fancc (ENSCGRG00001013491) Aopep (ENSCGRG00001012713) Fbp1 (ENSCGRG00001009150) Fbp2 (ENSCGRG00001022515) Cts8 (ENSCGRG00001013704) ##22 Cts6 (ENSCGRG00001022925) ##22 Ctsq (ENSCGRG00001002399) ##22 Ctsj (ENSCGRG00001024764) ##22 ENSCGRG00001015895 ##22 ENSCGRG00001024602 ##22 4930486L24Rik (ENSCGRG00001023066) ##22 ENSCGRG00001019274 ##22 ENSCGRG00001014152 ##22 BC051665 (ENSCGRG00001008665) ##22 Dapk1 (ENSCGRG00001000497) Gas1 (ENSCGRG00001010171) Tut7 (ENSCGRG00001020605) ENSCGRG00001007037 1700014D04Rik (ENSCGRG00001022165) Spata31d1d (ENSCGRG00001011836) ENSCGRG00001001460 Golden Hamster MODERN SPECIES 699 Prxl2c (ENSMAUG00000007262) Cdc14b (ENSMAUG00000002176) Habp4 (ENSMAUG00000020977) Zfp367 (ENSMAUG00000019699) Slc35d2 (ENSMAUG00000016504) Hsd17b3 (ENSMAUG00000018759) Ercc6l2 (ENSMAUG00000004820) Ptch1 (ENSMAUG00000014816) Fancc (ENSMAUG00000012407) Aopep (ENSMAUG00000003279) Fbp1 (ENSMAUG00000015819) Fbp2 (ENSMAUG00000017596) ENSMAUG00000016362 ##22 Cts8 (ENSMAUG00000018878) ##22 Ctsr (ENSMAUG00000014961) ##22 Cts6 (ENSMAUG00000016662) ##22 Ctsj (ENSMAUG00000008852) ##22 Ctsll3 (ENSMAUG00000014374) ##22 BC051665 (ENSMAUG00000012142) ##22 Dapk1 (ENSMAUG00000000180) Gas1 (ENSMAUG00000019435) Tut7 (ENSMAUG00000006963) ENSMAUG00000000645 1700014D04Rik (ENSMAUG00000020029) ENSMAUG00000012538 Naa35 (ENSMAUG00000006704) ENSMAUG00000002599 Ntrk2 (ENSMAUG00000014898) Slc28a3 (ENSMAUG00000007466) ENSMAUG00000015268 2210016F16Rik (ENSMAUG00000001833) Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.a.b ENSGT00940000164141 ENSGT00530000063675.b Northern American deer mouse MODERN SPECIES 18 Cdc14b (ENSPEMG00000020534) ENSPEMG00000021224 Zfp367 (ENSPEMG00000013770) Slc35d2 (ENSPEMG00000021173) Hsd17b3 (ENSPEMG00000021000) ENSPEMG00000006631 Ptch1 (ENSPEMG00000016117) Fancc (ENSPEMG00000022299) Aopep (ENSPEMG00000011169) Fbp1 (ENSPEMG00000020415) Fbp2 (ENSPEMG00000003200) ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 BC051665 (ENSPEMG00000025235) ##22 Dapk1 (ENSPEMG00000022627) Murinae ANCESTRAL SPECIES 21 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a Mus ANCESTRAL SPECIES 18 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b Mus_A ANCESTRAL SPECIES 14 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b Mus_B ANCESTRAL SPECIES 13 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 Mus_C ANCESTRAL SPECIES 10 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 spretus MODERN SPECIES 4 Cdc14b (MGP_SPRETEiJ_G0019520) Habp4 (MGP_SPRETEiJ_G0019519) Zfp367 (MGP_SPRETEiJ_G0019518) Slc35d2 (MGP_SPRETEiJ_G0019517) Hsd17b3 (MGP_SPRETEiJ_G0019516) MGP_SPRETEiJ_G0019515 Ptch1 (MGP_SPRETEiJ_G0019514) Fancc (MGP_SPRETEiJ_G0019513) Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Gas1 (MGP_SPRETEiJ_G0019492) Tut7 (MGP_SPRETEiJ_G0019491) MGP_SPRETEiJ_G0019490 Steppe mouse MODERN SPECIES 2052 Cts7 (ENSMSIG00000015541) ##22 Cts8 (ENSMSIG00000015619) ##22 Cts6 (ENSMSIG00000015627) ##22 Ctsr (ENSMSIG00000015645) ##22 Mouse MODERN SPECIES 4 Fbp1 (ENSMUSG00000069805) Fbp2 (ENSMUSG00000021456) Gm5141 (ENSMUSG00000091183) Platr25 (ENSMUSG00000074863) 6720489N17Rik (ENSMUSG00000072066) Zfp934 (ENSMUSG00000074865) Gm49359 (ENSMUSG00000055228) Zfp935 (ENSMUSG00000113450) Gm3604 (ENSMUSG00000094942) Zfp808 (ENSMUSG00000074867) Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Gas1 (ENSMUSG00000052957) Tut7 (ENSMUSG00000035248) Isca1 (ENSMUSG00000044792) Ryukyu mouse MODERN SPECIES 4 Cdc14b (MGP_CAROLIEiJ_G0018640) Habp4 (MGP_CAROLIEiJ_G0018639) Zfp367 (MGP_CAROLIEiJ_G0018638) Slc35d2 (MGP_CAROLIEiJ_G0018637) Hsd17b3 (MGP_CAROLIEiJ_G0018636) MGP_CAROLIEiJ_G0018635 Ptch1 (MGP_CAROLIEiJ_G0018634) Fancc (MGP_CAROLIEiJ_G0018633) Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Gas1 (MGP_CAROLIEiJ_G0018613) Tut7 (MGP_CAROLIEiJ_G0018612) MGP_CAROLIEiJ_G0018611 1700014D04Rik (MGP_CAROLIEiJ_G0018610) Shrew mouse MODERN SPECIES 7 Cdc14b (MGP_PahariEiJ_G0019704) Habp4 (MGP_PahariEiJ_G0019703) Zfp367 (MGP_PahariEiJ_G0019702) Slc35d2 (MGP_PahariEiJ_G0019701) Hsd17b3 (MGP_PahariEiJ_G0019700) MGP_PahariEiJ_G0019699 Ptch1 (MGP_PahariEiJ_G0019698) Fancc (MGP_PahariEiJ_G0019697) Aopep (MGP_PahariEiJ_G0019696) Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Gas1 (MGP_PahariEiJ_G0019677) Tut7 (MGP_PahariEiJ_G0019676) MGP_PahariEiJ_G0019675 1700014D04Rik (MGP_PahariEiJ_G0019674) Rat MODERN SPECIES 8 LOC102552000 (ENSRNOG00000068835) LOC102552000 (ENSRNOG00000070106) ENSRNOG00000065506 LOC102549249 (ENSRNOG00000063621) ENSRNOG00000064579 LOC102549249 (ENSRNOG00000067517) AABR07028805.1 (ENSRNOG00000040024) LOC102555902 (ENSRNOG00000068265) ENSRNOG00000063185 LOC108348224 (ENSRNOG00000062387) Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Dapk1 (ENSRNOG00000018198) Tut7 (ENSRNOG00000016629) Isca1 (ENSRNOG00000018343) Muroidea_A ANCESTRAL SPECIES 14 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 Cricetidae ANCESTRAL SPECIES 22 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 Cricetinae ANCESTRAL SPECIES 20 ENSGT00510000048363 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001002667 Cdc14b (ENSCGRG00001019066) Habp4 (ENSCGRG00001025040) Zfp367 (ENSCGRG00001022531) Slc35d2 (ENSCGRG00001020192) Hsd17b3 (ENSCGRG00001009870) ENSCGRG00001022738 ENSCGRG00001008618 Ptch1 (ENSCGRG00001010176) Fancc (ENSCGRG00001013491) Aopep (ENSCGRG00001012713) Fbp1 (ENSCGRG00001009150) Fbp2 (ENSCGRG00001022515) Cts8 (ENSCGRG00001013704) ##22 Cts6 (ENSCGRG00001022925) ##22 Ctsq (ENSCGRG00001002399) ##22 Ctsj (ENSCGRG00001024764) ##22 ENSCGRG00001015895 ##22 ENSCGRG00001024602 ##22 4930486L24Rik (ENSCGRG00001023066) ##22 ENSCGRG00001019274 ##22 ENSCGRG00001014152 ##22 BC051665 (ENSCGRG00001008665) ##22 Dapk1 (ENSCGRG00001000497) Gas1 (ENSCGRG00001010171) Tut7 (ENSCGRG00001020605) ENSCGRG00001007037 1700014D04Rik (ENSCGRG00001022165) Spata31d1d (ENSCGRG00001011836) ENSCGRG00001001460 Golm1 (ENSCGRG00001021525) Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.a.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 18 Zfp367 (ENSPEMG00000013770) Slc35d2 (ENSPEMG00000021173) Hsd17b3 (ENSPEMG00000021000) ENSPEMG00000006631 Ptch1 (ENSPEMG00000016117) Fancc (ENSPEMG00000022299) Aopep (ENSPEMG00000011169) Fbp1 (ENSPEMG00000020415) Fbp2 (ENSPEMG00000003200) ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 BC051665 (ENSPEMG00000025235) ##22 Dapk1 (ENSPEMG00000022627) Gas1 (ENSPEMG00000007789) Tut7 (ENSPEMG00000014030) Northern American deer mouse MODERN SPECIES 18 Slc35d2 (ENSPEMG00000021173) Hsd17b3 (ENSPEMG00000021000) ENSPEMG00000006631 Ptch1 (ENSPEMG00000016117) Fancc (ENSPEMG00000022299) Aopep (ENSPEMG00000011169) Fbp1 (ENSPEMG00000020415) Fbp2 (ENSPEMG00000003200) ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 BC051665 (ENSPEMG00000025235) ##22 Dapk1 (ENSPEMG00000022627) Gas1 (ENSPEMG00000007789) Tut7 (ENSPEMG00000014030) ENSPEMG00000029941 Prairie vole DUPLICATION Prairie vole DUPLICATION Prairie vole MODERN SPECIES 3 Ptch1 (ENSMOCG00000022943) Fancc (ENSMOCG00000001776) Aopep (ENSMOCG00000003056) Fbp1 (ENSMOCG00000014907) Fbp2 (ENSMOCG00000017815) ENSMOCG00000010780 ##22 Cts7 (ENSMOCG00000001845) ##22 Cts8 (ENSMOCG00000005191) ##22 ENSMOCG00000020961 ##22 ENSMOCG00000013109 ##22 ENSMOCG00000000781 ##22 Ctsj (ENSMOCG00000013146) ##22 4930486L24Rik (ENSMOCG00000005874) ##22 ENSMOCG00000019948 ##22 ENSMOCG00000012620 ##22 Dapk1 (ENSMOCG00000016789) Gas1 (ENSMOCG00000002738) ENSMOCG00000022892 ENSMOCG00000007812 ENSMOCG00000000209 ENSMOCG00000000876 4921517D22Rik (ENSMOCG00000022999) ENSMOCG00000019507 Naa35 (ENSMOCG00000013999) Agtpbp1 (ENSMOCG00000014650) Prairie vole MODERN SPECIES 3 Ptch1 (ENSMOCG00000022943) Fancc (ENSMOCG00000001776) Aopep (ENSMOCG00000003056) Fbp1 (ENSMOCG00000014907) Fbp2 (ENSMOCG00000017815) ENSMOCG00000010780 ##22 Cts7 (ENSMOCG00000001845) ##22 Cts8 (ENSMOCG00000005191) ##22 ENSMOCG00000020961 ##22 ENSMOCG00000013109 ##22 ENSMOCG00000000781 ##22 Ctsj (ENSMOCG00000013146) ##22 4930486L24Rik (ENSMOCG00000005874) ##22 ENSMOCG00000019948 ##22 ENSMOCG00000012620 ##22 Dapk1 (ENSMOCG00000016789) Gas1 (ENSMOCG00000002738) ENSMOCG00000022892 ENSMOCG00000007812 ENSMOCG00000000209 ENSMOCG00000000876 4921517D22Rik (ENSMOCG00000022999) ENSMOCG00000019507 Naa35 (ENSMOCG00000013999) Agtpbp1 (ENSMOCG00000014650) Ntrk2 (ENSMOCG00000015461) Prairie vole MODERN SPECIES 3 Ptch1 (ENSMOCG00000022943) Fancc (ENSMOCG00000001776) Aopep (ENSMOCG00000003056) Fbp1 (ENSMOCG00000014907) Fbp2 (ENSMOCG00000017815) ENSMOCG00000010780 ##22 Cts7 (ENSMOCG00000001845) ##22 Cts8 (ENSMOCG00000005191) ##22 ENSMOCG00000020961 ##22 ENSMOCG00000013109 ##22 ENSMOCG00000000781 ##22 Ctsj (ENSMOCG00000013146) ##22 4930486L24Rik (ENSMOCG00000005874) ##22 ENSMOCG00000019948 ##22 ENSMOCG00000012620 ##22 Dapk1 (ENSMOCG00000016789) Gas1 (ENSMOCG00000002738) ENSMOCG00000022892 ENSMOCG00000007812 ENSMOCG00000000209 ENSMOCG00000000876 4921517D22Rik (ENSMOCG00000022999) ENSMOCG00000019507 Naa35 (ENSMOCG00000013999) Murinae DUPLICATION Murinae ANCESTRAL SPECIES 21 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 Mus ANCESTRAL SPECIES 18 ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b Mus_A ANCESTRAL SPECIES 14 ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a Mus_B ANCESTRAL SPECIES 13 ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b Mus_C ANCESTRAL SPECIES 10 ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b Steppe mouse MODERN SPECIES 1371 Ctsq (ENSMSIG00000005475) ##22 spretus MODERN SPECIES 4 Zfp367 (MGP_SPRETEiJ_G0019518) Slc35d2 (MGP_SPRETEiJ_G0019517) Hsd17b3 (MGP_SPRETEiJ_G0019516) MGP_SPRETEiJ_G0019515 Ptch1 (MGP_SPRETEiJ_G0019514) Fancc (MGP_SPRETEiJ_G0019513) Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Gas1 (MGP_SPRETEiJ_G0019492) Tut7 (MGP_SPRETEiJ_G0019491) MGP_SPRETEiJ_G0019490 1700014D04Rik (MGP_SPRETEiJ_G0019489) Spata31d1d (MGP_SPRETEiJ_G0019488) Mouse MODERN SPECIES 4 Gm5141 (ENSMUSG00000091183) Platr25 (ENSMUSG00000074863) 6720489N17Rik (ENSMUSG00000072066) Zfp934 (ENSMUSG00000074865) Gm49359 (ENSMUSG00000055228) Zfp935 (ENSMUSG00000113450) Gm3604 (ENSMUSG00000094942) Zfp808 (ENSMUSG00000074867) Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Gas1 (ENSMUSG00000052957) Tut7 (ENSMUSG00000035248) Isca1 (ENSMUSG00000044792) 1700014D04Rik (ENSMUSG00000051054) Spata31d1d (ENSMUSG00000043986) Rat MODERN SPECIES 8 LOC102549249 (ENSRNOG00000063621) ENSRNOG00000064579 LOC102549249 (ENSRNOG00000067517) AABR07028805.1 (ENSRNOG00000040024) LOC102555902 (ENSRNOG00000068265) ENSRNOG00000063185 LOC108348224 (ENSRNOG00000062387) Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Dapk1 (ENSRNOG00000018198) Tut7 (ENSRNOG00000016629) Isca1 (ENSRNOG00000018343) AABR07026929.1 (ENSRNOG00000042026) Spata31d1 (ENSRNOG00000027014) Spata31d1b (ENSRNOG00000069288) Murinae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.b.b.a.b.f ##22 Rat DUPLICATION Rat MODERN SPECIES 8 Spata31d3 (ENSRNOG00000056413) Spata31d1b (ENSRNOG00000069288) Spata31d1 (ENSRNOG00000027014) AABR07026929.1 (ENSRNOG00000042026) Isca1 (ENSRNOG00000018343) Tut7 (ENSRNOG00000016629) Dapk1 (ENSRNOG00000018198) RGD1308751 (ENSRNOG00000039954) ##22 Ctsll3 (ENSRNOG00000069877) ##22 Testin (ENSRNOG00000018028) ##22 Ctla2a (ENSRNOG00000039971) ##22 Tpbpa (ENSRNOG00000039975) RGD1564827 (ENSRNOG00000069712) ##22 Ctsj (ENSRNOG00000046476) ##22 Ctsql2 (ENSRNOG00000017946) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsq (ENSRNOG00000048693) ##22 AABR07043347.1 (ENSRNOG00000051410) MGC114246 (ENSRNOG00000039990) ##22 Ctsr (ENSRNOG00000017888) ##22 Cts8 (ENSRNOG00000040000) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts7 (ENSRNOG00000033540) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Ctsm (ENSRNOG00000065730) ##22 LOC108348224 (ENSRNOG00000062387) ENSRNOG00000063185 LOC102555902 (ENSRNOG00000068265) AABR07028805.1 (ENSRNOG00000040024) LOC102549249 (ENSRNOG00000067517) ENSRNOG00000064579 Rat MODERN SPECIES 8 LOC102549249 (ENSRNOG00000067517) AABR07028805.1 (ENSRNOG00000040024) LOC102555902 (ENSRNOG00000068265) ENSRNOG00000063185 LOC108348224 (ENSRNOG00000062387) Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Dapk1 (ENSRNOG00000018198) Tut7 (ENSRNOG00000016629) Isca1 (ENSRNOG00000018343) AABR07026929.1 (ENSRNOG00000042026) Spata31d1 (ENSRNOG00000027014) Spata31d1b (ENSRNOG00000069288) Spata31d3 (ENSRNOG00000056413) LOC100912252 (ENSRNOG00000042206) Muroidea_A DUPLICATION Muroidea_A ANCESTRAL SPECIES 14 ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 Cricetidae ANCESTRAL SPECIES 22 ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000155950 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 Golden Hamster MODERN SPECIES 699 Cdc14b (ENSMAUG00000002176) Habp4 (ENSMAUG00000020977) Zfp367 (ENSMAUG00000019699) Slc35d2 (ENSMAUG00000016504) Hsd17b3 (ENSMAUG00000018759) Ercc6l2 (ENSMAUG00000004820) Ptch1 (ENSMAUG00000014816) Fancc (ENSMAUG00000012407) Aopep (ENSMAUG00000003279) Fbp1 (ENSMAUG00000015819) Fbp2 (ENSMAUG00000017596) ENSMAUG00000016362 ##22 Cts8 (ENSMAUG00000018878) ##22 Ctsr (ENSMAUG00000014961) ##22 Cts6 (ENSMAUG00000016662) ##22 Ctsj (ENSMAUG00000008852) ##22 Ctsll3 (ENSMAUG00000014374) ##22 BC051665 (ENSMAUG00000012142) ##22 Dapk1 (ENSMAUG00000000180) Gas1 (ENSMAUG00000019435) Tut7 (ENSMAUG00000006963) ENSMAUG00000000645 1700014D04Rik (ENSMAUG00000020029) ENSMAUG00000012538 Naa35 (ENSMAUG00000006704) ENSMAUG00000002599 Ntrk2 (ENSMAUG00000014898) Slc28a3 (ENSMAUG00000007466) ENSMAUG00000015268 2210016F16Rik (ENSMAUG00000001833) Kif27 (ENSMAUG00000007799) Chinese hamster chok1gshd MODERN SPECIES 317 Cdc14b (ENSCGRG00001019066) Habp4 (ENSCGRG00001025040) Zfp367 (ENSCGRG00001022531) Slc35d2 (ENSCGRG00001020192) Hsd17b3 (ENSCGRG00001009870) ENSCGRG00001022738 ENSCGRG00001008618 Ptch1 (ENSCGRG00001010176) Fancc (ENSCGRG00001013491) Aopep (ENSCGRG00001012713) Fbp1 (ENSCGRG00001009150) Fbp2 (ENSCGRG00001022515) Cts8 (ENSCGRG00001013704) ##22 Cts6 (ENSCGRG00001022925) ##22 Ctsq (ENSCGRG00001002399) ##22 Ctsj (ENSCGRG00001024764) ##22 ENSCGRG00001015895 ##22 ENSCGRG00001024602 ##22 4930486L24Rik (ENSCGRG00001023066) ##22 ENSCGRG00001019274 ##22 ENSCGRG00001014152 ##22 BC051665 (ENSCGRG00001008665) ##22 Dapk1 (ENSCGRG00001000497) Gas1 (ENSCGRG00001010171) Tut7 (ENSCGRG00001020605) ENSCGRG00001007037 1700014D04Rik (ENSCGRG00001022165) Spata31d1d (ENSCGRG00001011836) ENSCGRG00001001460 Golm1 (ENSCGRG00001021525) ENSCGRG00001022085 Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.a.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 Northern American deer mouse MODERN SPECIES 18 Hsd17b3 (ENSPEMG00000021000) ENSPEMG00000006631 Ptch1 (ENSPEMG00000016117) Fancc (ENSPEMG00000022299) Aopep (ENSPEMG00000011169) Fbp1 (ENSPEMG00000020415) Fbp2 (ENSPEMG00000003200) ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 BC051665 (ENSPEMG00000025235) ##22 Dapk1 (ENSPEMG00000022627) Gas1 (ENSPEMG00000007789) Tut7 (ENSPEMG00000014030) ENSPEMG00000029941 ENSPEMG00000028848 Prairie vole MODERN SPECIES 3 Ptch1 (ENSMOCG00000022943) Fancc (ENSMOCG00000001776) Aopep (ENSMOCG00000003056) Fbp1 (ENSMOCG00000014907) Fbp2 (ENSMOCG00000017815) ENSMOCG00000010780 ##22 Cts7 (ENSMOCG00000001845) ##22 Cts8 (ENSMOCG00000005191) ##22 ENSMOCG00000020961 ##22 ENSMOCG00000013109 ##22 ENSMOCG00000000781 ##22 Ctsj (ENSMOCG00000013146) ##22 4930486L24Rik (ENSMOCG00000005874) ##22 ENSMOCG00000019948 ##22 ENSMOCG00000012620 ##22 Dapk1 (ENSMOCG00000016789) Gas1 (ENSMOCG00000002738) ENSMOCG00000022892 ENSMOCG00000007812 ENSMOCG00000000209 ENSMOCG00000000876 4921517D22Rik (ENSMOCG00000022999) ENSMOCG00000019507 Naa35 (ENSMOCG00000013999) Agtpbp1 (ENSMOCG00000014650) Ntrk2 (ENSMOCG00000015461) Slc28a3 (ENSMOCG00000005269) Murinae ANCESTRAL SPECIES 21 ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b Mus ANCESTRAL SPECIES 18 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 Mus_A ANCESTRAL SPECIES 14 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b Mus_B ANCESTRAL SPECIES 13 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a Mouse MODERN SPECIES 4 Platr25 (ENSMUSG00000074863) 6720489N17Rik (ENSMUSG00000072066) Zfp934 (ENSMUSG00000074865) Gm49359 (ENSMUSG00000055228) Zfp935 (ENSMUSG00000113450) Gm3604 (ENSMUSG00000094942) Zfp808 (ENSMUSG00000074867) Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Gas1 (ENSMUSG00000052957) Tut7 (ENSMUSG00000035248) Isca1 (ENSMUSG00000044792) 1700014D04Rik (ENSMUSG00000051054) Spata31d1d (ENSMUSG00000043986) Spata31d1b (ENSMUSG00000091311) Mus_C ANCESTRAL SPECIES 10 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a Steppe mouse MODERN SPECIES 3363 Ctsj (ENSMSIG00000021739) ##22 Tpbpa (ENSMSIG00000021726) Ctla2a (ENSMSIG00000021719) ##22 Tpbpb (ENSMSIG00000021690) Ctla2b (ENSMSIG00000021665) ##22 4930486L24Rik (ENSMSIG00000021647) ##22 Ctsll3 (ENSMSIG00000021625) ##22 BC051665 (ENSMSIG00000021609) ##22 Dapk1 (ENSMSIG00000021579) ENSMSIG00000021574 ENSMSIG00000021571 Gas1 (ENSMSIG00000021556) Tut7 (ENSMSIG00000021435) ENSMSIG00000021410 1700014D04Rik (ENSMSIG00000021396) Spata31d1d (ENSMSIG00000021387) spretus MODERN SPECIES 4 Slc35d2 (MGP_SPRETEiJ_G0019517) Hsd17b3 (MGP_SPRETEiJ_G0019516) MGP_SPRETEiJ_G0019515 Ptch1 (MGP_SPRETEiJ_G0019514) Fancc (MGP_SPRETEiJ_G0019513) Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Gas1 (MGP_SPRETEiJ_G0019492) Tut7 (MGP_SPRETEiJ_G0019491) MGP_SPRETEiJ_G0019490 1700014D04Rik (MGP_SPRETEiJ_G0019489) Spata31d1d (MGP_SPRETEiJ_G0019488) Spata31d1a (MGP_SPRETEiJ_G0019487) Ryukyu mouse MODERN SPECIES 4 Zfp367 (MGP_CAROLIEiJ_G0018638) Slc35d2 (MGP_CAROLIEiJ_G0018637) Hsd17b3 (MGP_CAROLIEiJ_G0018636) MGP_CAROLIEiJ_G0018635 Ptch1 (MGP_CAROLIEiJ_G0018634) Fancc (MGP_CAROLIEiJ_G0018633) Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Gas1 (MGP_CAROLIEiJ_G0018613) Tut7 (MGP_CAROLIEiJ_G0018612) MGP_CAROLIEiJ_G0018611 1700014D04Rik (MGP_CAROLIEiJ_G0018610) Spata31d1d (MGP_CAROLIEiJ_G0018609) MGP_CAROLIEiJ_G0018608 Shrew mouse MODERN SPECIES 7 Zfp367 (MGP_PahariEiJ_G0019702) Slc35d2 (MGP_PahariEiJ_G0019701) Hsd17b3 (MGP_PahariEiJ_G0019700) MGP_PahariEiJ_G0019699 Ptch1 (MGP_PahariEiJ_G0019698) Fancc (MGP_PahariEiJ_G0019697) Aopep (MGP_PahariEiJ_G0019696) Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Gas1 (MGP_PahariEiJ_G0019677) Tut7 (MGP_PahariEiJ_G0019676) MGP_PahariEiJ_G0019675 1700014D04Rik (MGP_PahariEiJ_G0019674) Spata31d1d (MGP_PahariEiJ_G0019673) Spata31d1b (MGP_PahariEiJ_G0019672) Rat MODERN SPECIES 8 AABR07028805.1 (ENSRNOG00000040024) LOC102555902 (ENSRNOG00000068265) ENSRNOG00000063185 LOC108348224 (ENSRNOG00000062387) Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Dapk1 (ENSRNOG00000018198) Tut7 (ENSRNOG00000016629) Isca1 (ENSRNOG00000018343) AABR07026929.1 (ENSRNOG00000042026) Spata31d1 (ENSRNOG00000027014) Spata31d1b (ENSRNOG00000069288) Spata31d3 (ENSRNOG00000056413) LOC100912252 (ENSRNOG00000042206) Golm1 (ENSRNOG00000018400) Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Cricetidae DUPLICATION Cricetidae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 Cricetinae ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 Chinese hamster chok1gshd MODERN SPECIES 317 Habp4 (ENSCGRG00001025040) Zfp367 (ENSCGRG00001022531) Slc35d2 (ENSCGRG00001020192) Hsd17b3 (ENSCGRG00001009870) ENSCGRG00001022738 ENSCGRG00001008618 Ptch1 (ENSCGRG00001010176) Fancc (ENSCGRG00001013491) Aopep (ENSCGRG00001012713) Fbp1 (ENSCGRG00001009150) Fbp2 (ENSCGRG00001022515) Cts8 (ENSCGRG00001013704) ##22 Cts6 (ENSCGRG00001022925) ##22 Ctsq (ENSCGRG00001002399) ##22 Ctsj (ENSCGRG00001024764) ##22 ENSCGRG00001015895 ##22 ENSCGRG00001024602 ##22 4930486L24Rik (ENSCGRG00001023066) ##22 ENSCGRG00001019274 ##22 ENSCGRG00001014152 ##22 BC051665 (ENSCGRG00001008665) ##22 Dapk1 (ENSCGRG00001000497) Gas1 (ENSCGRG00001010171) Tut7 (ENSCGRG00001020605) ENSCGRG00001007037 1700014D04Rik (ENSCGRG00001022165) Spata31d1d (ENSCGRG00001011836) ENSCGRG00001001460 Golm1 (ENSCGRG00001021525) ENSCGRG00001022085 Agtpbp1 (ENSCGRG00001021345) Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.a.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 BC051665 (ENSPEMG00000025235) ##22 Dapk1 (ENSPEMG00000022627) Gas1 (ENSPEMG00000007789) Tut7 (ENSPEMG00000014030) ENSPEMG00000029941 ENSPEMG00000028848 ENSPEMG00000025105 ENSPEMG00000025782 4921517D22Rik (ENSPEMG00000022165) Golm1 (ENSPEMG00000021119) Naa35 (ENSPEMG00000020283) Agtpbp1 (ENSPEMG00000003465) ENSPEMG00000030036 Cricetidae ANCESTRAL SPECIES 22 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Cricetidae_B ANCESTRAL SPECIES ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 Northern American deer mouse DUPLICATION Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 18 Fbp2 (ENSPEMG00000003200) ENSPEMG00000020678 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000027810 ##22 Cts8 (ENSPEMG00000021957) ##22 Cts6 (ENSPEMG00000016021) ##22 Ctsr (ENSPEMG00000001393) ##22 ENSPEMG00000029752 ##22 ENSPEMG00000026728 ##22 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000031098 ENSPEMG00000020375 ENSPEMG00000026470 ENSPEMG00000030527 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000022155 ##22 4930486L24Rik (ENSPEMG00000016874) ##22 Ctsll3 (ENSPEMG00000029464) ##22 BC051665 (ENSPEMG00000025235) ##22 Dapk1 (ENSPEMG00000022627) Gas1 (ENSPEMG00000007789) Tut7 (ENSPEMG00000014030) ENSPEMG00000029941 ENSPEMG00000028848 ENSPEMG00000025105 ENSPEMG00000025782 4921517D22Rik (ENSPEMG00000022165) Golm1 (ENSPEMG00000021119) Naa35 (ENSPEMG00000020283) Agtpbp1 (ENSPEMG00000003465) Northern American deer mouse MODERN SPECIES 18 Golm1 (ENSPEMG00000021119) 4921517D22Rik (ENSPEMG00000022165) ENSPEMG00000025782 ENSPEMG00000025105 ENSPEMG00000028848 ENSPEMG00000029941 Tut7 (ENSPEMG00000014030) Gas1 (ENSPEMG00000007789) Dapk1 (ENSPEMG00000022627) BC051665 (ENSPEMG00000025235) ##22 Ctsll3 (ENSPEMG00000029464) ##22 4930486L24Rik (ENSPEMG00000016874) ##22 ENSPEMG00000022155 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000030527 ##22 ENSPEMG00000026470 ENSPEMG00000020375 ENSPEMG00000031098 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000026728 ##22 ENSPEMG00000029752 ##22 Ctsr (ENSPEMG00000001393) ##22 Cts6 (ENSPEMG00000016021) ##22 Cts8 (ENSPEMG00000021957) ##22 ENSPEMG00000027810 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000020678 ##22 Fbp2 (ENSPEMG00000003200) Fbp1 (ENSPEMG00000020415) Aopep (ENSPEMG00000011169) Northern American deer mouse MODERN SPECIES 18 Naa35 (ENSPEMG00000020283) Golm1 (ENSPEMG00000021119) 4921517D22Rik (ENSPEMG00000022165) ENSPEMG00000025782 ENSPEMG00000025105 ENSPEMG00000028848 ENSPEMG00000029941 Tut7 (ENSPEMG00000014030) Gas1 (ENSPEMG00000007789) Dapk1 (ENSPEMG00000022627) BC051665 (ENSPEMG00000025235) ##22 Ctsll3 (ENSPEMG00000029464) ##22 4930486L24Rik (ENSPEMG00000016874) ##22 ENSPEMG00000022155 ##22 ENSPEMG00000028441 ##22 ENSPEMG00000026019 ##22 ENSPEMG00000030527 ##22 ENSPEMG00000026470 ENSPEMG00000020375 ENSPEMG00000031098 Ctsj (ENSPEMG00000015113) ##22 ENSPEMG00000026728 ##22 ENSPEMG00000029752 ##22 Ctsr (ENSPEMG00000001393) ##22 Cts6 (ENSPEMG00000016021) ##22 Cts8 (ENSPEMG00000021957) ##22 ENSPEMG00000027810 ##22 ENSPEMG00000030384 ##22 ENSPEMG00000020678 ##22 Fbp2 (ENSPEMG00000003200) Fbp1 (ENSPEMG00000020415) Cricetinae ANCESTRAL SPECIES 20 ENSGT00520000055591.b ENSGT00670000098074 ENSGT00940000160237 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 ENSGT00940000155181 ENSGT00390000016025.a Chinese hamster chok1gshd MODERN SPECIES 317 Zfp367 (ENSCGRG00001022531) Slc35d2 (ENSCGRG00001020192) Hsd17b3 (ENSCGRG00001009870) ENSCGRG00001022738 ENSCGRG00001008618 Ptch1 (ENSCGRG00001010176) Fancc (ENSCGRG00001013491) Aopep (ENSCGRG00001012713) Fbp1 (ENSCGRG00001009150) Fbp2 (ENSCGRG00001022515) Cts8 (ENSCGRG00001013704) ##22 Cts6 (ENSCGRG00001022925) ##22 Ctsq (ENSCGRG00001002399) ##22 Ctsj (ENSCGRG00001024764) ##22 ENSCGRG00001015895 ##22 ENSCGRG00001024602 ##22 4930486L24Rik (ENSCGRG00001023066) ##22 ENSCGRG00001019274 ##22 ENSCGRG00001014152 ##22 BC051665 (ENSCGRG00001008665) ##22 Dapk1 (ENSCGRG00001000497) Gas1 (ENSCGRG00001010171) Tut7 (ENSCGRG00001020605) ENSCGRG00001007037 1700014D04Rik (ENSCGRG00001022165) Spata31d1d (ENSCGRG00001011836) ENSCGRG00001001460 Golm1 (ENSCGRG00001021525) ENSCGRG00001022085 Agtpbp1 (ENSCGRG00001021345) ENSCGRG00001013499 Murinae ANCESTRAL SPECIES 21 ENSGT00940000160266 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 ENSGT00940000157707 Mus ANCESTRAL SPECIES 18 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 Mus_A ANCESTRAL SPECIES 14 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 Mus_B DUPLICATION Mus_B ANCESTRAL SPECIES 13 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 Mouse MODERN SPECIES 4 Gm3604 (ENSMUSG00000094942) Zfp808 (ENSMUSG00000074867) Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Gas1 (ENSMUSG00000052957) Tut7 (ENSMUSG00000035248) Isca1 (ENSMUSG00000044792) 1700014D04Rik (ENSMUSG00000051054) Spata31d1d (ENSMUSG00000043986) Spata31d1b (ENSMUSG00000091311) Spata31d1a (ENSMUSG00000050876) 4921517D22Rik (ENSMUSG00000049902) Golm1 (ENSMUSG00000021556) Naa35 (ENSMUSG00000021555) Agtpbp1 (ENSMUSG00000021557) Mus_C ANCESTRAL SPECIES 10 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 ENSGT00530000063675.b ENSGT00390000002445 Steppe mouse MODERN SPECIES 3363 Ctsj (ENSMSIG00000021739) ##22 Tpbpa (ENSMSIG00000021726) Ctla2a (ENSMSIG00000021719) ##22 Tpbpb (ENSMSIG00000021690) Ctla2b (ENSMSIG00000021665) ##22 4930486L24Rik (ENSMSIG00000021647) ##22 Ctsll3 (ENSMSIG00000021625) ##22 BC051665 (ENSMSIG00000021609) ##22 Dapk1 (ENSMSIG00000021579) ENSMSIG00000021574 ENSMSIG00000021571 Gas1 (ENSMSIG00000021556) Tut7 (ENSMSIG00000021435) ENSMSIG00000021410 1700014D04Rik (ENSMSIG00000021396) Spata31d1d (ENSMSIG00000021387) Spata31d1b (ENSMSIG00000021379) Spata31d1a (ENSMSIG00000021365) 4921517D22Rik (ENSMSIG00000021349) Golm1 (ENSMSIG00000021316) spretus MODERN SPECIES 4 Fancc (MGP_SPRETEiJ_G0019513) Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Gas1 (MGP_SPRETEiJ_G0019492) Tut7 (MGP_SPRETEiJ_G0019491) MGP_SPRETEiJ_G0019490 1700014D04Rik (MGP_SPRETEiJ_G0019489) Spata31d1d (MGP_SPRETEiJ_G0019488) Spata31d1a (MGP_SPRETEiJ_G0019487) 4921517D22Rik (MGP_SPRETEiJ_G0019486) MGP_SPRETEiJ_G0019485 Naa35 (MGP_SPRETEiJ_G0019484) Agtpbp1 (MGP_SPRETEiJ_G0019483) Mus_B ANCESTRAL SPECIES 13 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 Mouse MODERN SPECIES 4 Zfp934 (ENSMUSG00000074865) Gm49359 (ENSMUSG00000055228) Zfp935 (ENSMUSG00000113450) Gm3604 (ENSMUSG00000094942) Zfp808 (ENSMUSG00000074867) Cts3 (ENSMUSG00000074870) ##22 Gm49352 (ENSMUSG00000114904) Ctsm (ENSMUSG00000074871) ##22 Cts7 (ENSMUSG00000021440) ##22 Cts8 (ENSMUSG00000057446) ##22 Cts6 (ENSMUSG00000021441) ##22 Ctsr (ENSMUSG00000055679) ##22 Ctsq (ENSMUSG00000021439) ##22 Ctsj (ENSMUSG00000055298) ##22 Tpbpa (ENSMUSG00000033834) Ctla2a (ENSMUSG00000044258) ##22 Tpbpb (ENSMUSG00000062705) Gm49391 (ENSMUSG00000114432) Ctla2b (ENSMUSG00000074874) ##22 4930486L24Rik (ENSMUSG00000050345) ##22 Ctsll3 (ENSMUSG00000056728) ##22 BC051665 (ENSMUSG00000042243) ##22 Dapk1 (ENSMUSG00000021559) Gas1 (ENSMUSG00000052957) Tut7 (ENSMUSG00000035248) Isca1 (ENSMUSG00000044792) 1700014D04Rik (ENSMUSG00000051054) Spata31d1d (ENSMUSG00000043986) Spata31d1b (ENSMUSG00000091311) Spata31d1a (ENSMUSG00000050876) 4921517D22Rik (ENSMUSG00000049902) Mus_C ANCESTRAL SPECIES 10 ENSGT00940000161328 ENSGT00940000159011 ENSGT00390000016390 ENSGT00940000155211 ENSGT00390000015513.a.a.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.b.a ##22 ENSGT00940000153321.b.b.l.b.b.a.a.b.b ##22 ENSGT00940000153321.b.b.l.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.b ##22 ENSGT00940000153321.b.b.l.b.b.b.a.a.a ##22 ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##22 ENSGT00940000153321.b.b.l.b.b.b.b.a ##22 ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##22 ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##22 ENSGT00940000153321.b.b.l.b.a.b ##22 ENSGT00940000153321.b.b.l.b.a.a.a.a ##22 ENSGT00940000153321.b.b.l.b.a.a.a.b ##22 ENSGT00940000153424.a.b ENSGT00800000125290 ENSGT00390000001195.a ENSGT00940000156859 ENSGT00490000043385 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00940000164141 Steppe mouse MODERN SPECIES 3363 Ctsj (ENSMSIG00000021739) ##22 Tpbpa (ENSMSIG00000021726) Ctla2a (ENSMSIG00000021719) ##22 Tpbpb (ENSMSIG00000021690) Ctla2b (ENSMSIG00000021665) ##22 4930486L24Rik (ENSMSIG00000021647) ##22 Ctsll3 (ENSMSIG00000021625) ##22 BC051665 (ENSMSIG00000021609) ##22 Dapk1 (ENSMSIG00000021579) ENSMSIG00000021574 ENSMSIG00000021571 Gas1 (ENSMSIG00000021556) Tut7 (ENSMSIG00000021435) ENSMSIG00000021410 1700014D04Rik (ENSMSIG00000021396) Spata31d1d (ENSMSIG00000021387) Spata31d1b (ENSMSIG00000021379) Spata31d1a (ENSMSIG00000021365) spretus MODERN SPECIES 4 MGP_SPRETEiJ_G0019515 Ptch1 (MGP_SPRETEiJ_G0019514) Fancc (MGP_SPRETEiJ_G0019513) Aopep (MGP_SPRETEiJ_G0019512) Fbp1 (MGP_SPRETEiJ_G0019511) Fbp2 (MGP_SPRETEiJ_G0019510) MGP_SPRETEiJ_G0019509 ##22 Ctsm (MGP_SPRETEiJ_G0019508) ##22 Cts7 (MGP_SPRETEiJ_G0019507) ##22 Cts8 (MGP_SPRETEiJ_G0019506) ##22 Cts6 (MGP_SPRETEiJ_G0019505) ##22 Ctsr (MGP_SPRETEiJ_G0019504) ##22 Ctsq (MGP_SPRETEiJ_G0019503) ##22 Ctsj (MGP_SPRETEiJ_G0019502) ##22 MGP_SPRETEiJ_G0019501 Ctla2a (MGP_SPRETEiJ_G0019500) ##22 Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2b (MGP_SPRETEiJ_G0019498) ##22 4930486L24Rik (MGP_SPRETEiJ_G0019497) ##22 Ctsll3 (MGP_SPRETEiJ_G0019496) ##22 BC051665 (MGP_SPRETEiJ_G0019495) ##22 Dapk1 (MGP_SPRETEiJ_G0019494) MGP_SPRETEiJ_G0019493 Gas1 (MGP_SPRETEiJ_G0019492) Tut7 (MGP_SPRETEiJ_G0019491) MGP_SPRETEiJ_G0019490 1700014D04Rik (MGP_SPRETEiJ_G0019489) Spata31d1d (MGP_SPRETEiJ_G0019488) Spata31d1a (MGP_SPRETEiJ_G0019487) 4921517D22Rik (MGP_SPRETEiJ_G0019486) MGP_SPRETEiJ_G0019485 Ryukyu mouse DUPLICATION Ryukyu mouse MODERN SPECIES 4 MGP_CAROLIEiJ_G0018635 Ptch1 (MGP_CAROLIEiJ_G0018634) Fancc (MGP_CAROLIEiJ_G0018633) Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Gas1 (MGP_CAROLIEiJ_G0018613) Tut7 (MGP_CAROLIEiJ_G0018612) MGP_CAROLIEiJ_G0018611 1700014D04Rik (MGP_CAROLIEiJ_G0018610) Spata31d1d (MGP_CAROLIEiJ_G0018609) MGP_CAROLIEiJ_G0018608 MGP_CAROLIEiJ_G0018607 4921517D22Rik (MGP_CAROLIEiJ_G0018606) Golm1 (MGP_CAROLIEiJ_G0018605) Ryukyu mouse MODERN SPECIES 4 Ptch1 (MGP_CAROLIEiJ_G0018634) Fancc (MGP_CAROLIEiJ_G0018633) Aopep (MGP_CAROLIEiJ_G0018632) Fbp1 (MGP_CAROLIEiJ_G0018631) Fbp2 (MGP_CAROLIEiJ_G0018630) MGP_CAROLIEiJ_G0018629 ##22 Ctsm (MGP_CAROLIEiJ_G0018628) ##22 Cts7 (MGP_CAROLIEiJ_G0018627) ##22 Cts8 (MGP_CAROLIEiJ_G0018626) ##22 Cts6 (MGP_CAROLIEiJ_G0018625) ##22 Ctsr (MGP_CAROLIEiJ_G0018624) ##22 Ctsj (MGP_CAROLIEiJ_G0018623) ##22 MGP_CAROLIEiJ_G0018622 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018620 ##22 MGP_CAROLIEiJ_G0018619 ##22 4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##22 Ctsll3 (MGP_CAROLIEiJ_G0018617) ##22 BC051665 (MGP_CAROLIEiJ_G0018616) ##22 Dapk1 (MGP_CAROLIEiJ_G0018615) MGP_CAROLIEiJ_G0018614 Gas1 (MGP_CAROLIEiJ_G0018613) Tut7 (MGP_CAROLIEiJ_G0018612) MGP_CAROLIEiJ_G0018611 1700014D04Rik (MGP_CAROLIEiJ_G0018610) Spata31d1d (MGP_CAROLIEiJ_G0018609) MGP_CAROLIEiJ_G0018608 MGP_CAROLIEiJ_G0018607 4921517D22Rik (MGP_CAROLIEiJ_G0018606) Golm1 (MGP_CAROLIEiJ_G0018605) MGP_CAROLIEiJ_G0018604 Shrew mouse DUPLICATION Shrew mouse MODERN SPECIES 7 MGP_PahariEiJ_G0019699 Ptch1 (MGP_PahariEiJ_G0019698) Fancc (MGP_PahariEiJ_G0019697) Aopep (MGP_PahariEiJ_G0019696) Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Gas1 (MGP_PahariEiJ_G0019677) Tut7 (MGP_PahariEiJ_G0019676) MGP_PahariEiJ_G0019675 1700014D04Rik (MGP_PahariEiJ_G0019674) Spata31d1d (MGP_PahariEiJ_G0019673) Spata31d1b (MGP_PahariEiJ_G0019672) MGP_PahariEiJ_G0019671 4921517D22Rik (MGP_PahariEiJ_G0019670) Golm1 (MGP_PahariEiJ_G0019669) Shrew mouse MODERN SPECIES 7 Ptch1 (MGP_PahariEiJ_G0019698) Fancc (MGP_PahariEiJ_G0019697) Aopep (MGP_PahariEiJ_G0019696) Fbp1 (MGP_PahariEiJ_G0019695) Fbp2 (MGP_PahariEiJ_G0019694) MGP_PahariEiJ_G0019693 ##22 MGP_PahariEiJ_G0019692 ##22 Cts7 (MGP_PahariEiJ_G0019691) ##22 Cts8 (MGP_PahariEiJ_G0019690) ##22 Cts6 (MGP_PahariEiJ_G0019689) ##22 Ctsr (MGP_PahariEiJ_G0019688) ##22 Ctsj (MGP_PahariEiJ_G0019687) ##22 MGP_PahariEiJ_G0019686 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019684 ##22 MGP_PahariEiJ_G0019683 ##22 4930486L24Rik (MGP_PahariEiJ_G0019682) ##22 Ctsll3 (MGP_PahariEiJ_G0019681) ##22 BC051665 (MGP_PahariEiJ_G0019680) ##22 Dapk1 (MGP_PahariEiJ_G0019679) MGP_PahariEiJ_G0019678 Gas1 (MGP_PahariEiJ_G0019677) Tut7 (MGP_PahariEiJ_G0019676) MGP_PahariEiJ_G0019675 1700014D04Rik (MGP_PahariEiJ_G0019674) Spata31d1d (MGP_PahariEiJ_G0019673) Spata31d1b (MGP_PahariEiJ_G0019672) MGP_PahariEiJ_G0019671 4921517D22Rik (MGP_PahariEiJ_G0019670) Golm1 (MGP_PahariEiJ_G0019669) Naa35 (MGP_PahariEiJ_G0019668) Rat MODERN SPECIES 8 LOC108348224 (ENSRNOG00000062387) Ctsm (ENSRNOG00000065730) ##22 RGD1564657 (ENSRNOG00000050474) ##22 Cts7 (ENSRNOG00000033540) ##22 Cts8l1 (ENSRNOG00000065532) ##22 Cts8 (ENSRNOG00000040000) ##22 Ctsr (ENSRNOG00000017888) ##22 MGC114246 (ENSRNOG00000039990) ##22 AABR07043347.1 (ENSRNOG00000051410) Ctsq (ENSRNOG00000048693) ##22 LOC100364523 (ENSRNOG00000056519) ##22 Ctsql2 (ENSRNOG00000017946) ##22 Ctsj (ENSRNOG00000046476) ##22 RGD1564827 (ENSRNOG00000069712) ##22 Tpbpa (ENSRNOG00000039975) Ctla2a (ENSRNOG00000039971) ##22 Testin (ENSRNOG00000018028) ##22 Ctsll3 (ENSRNOG00000069877) ##22 RGD1308751 (ENSRNOG00000039954) ##22 Dapk1 (ENSRNOG00000018198) Tut7 (ENSRNOG00000016629) Isca1 (ENSRNOG00000018343) AABR07026929.1 (ENSRNOG00000042026) Spata31d1 (ENSRNOG00000027014) Spata31d1b (ENSRNOG00000069288) Spata31d3 (ENSRNOG00000056413) LOC100912252 (ENSRNOG00000042206) Golm1 (ENSRNOG00000018400) Naa35 (ENSRNOG00000018417) ENSRNOG00000064986 Agtpbp1 (ENSRNOG00000018651) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 827 Naa35 (ENSNGAG00000012706) ENSNGAG00000010869 ENSNGAG00000006724 ##22 ENSNGAG00000001073 ##22 ENSNGAG00000023443 ##22 ENSNGAG00000023296 ##22 Dapk1 (ENSNGAG00000023610) ENSNGAG00000016586 ENSNGAG00000012268 ENSNGAG00000021770 ENSNGAG00000022758 ENSNGAG00000022920 Upper Galilee mountains blind mole rat MODERN SPECIES 827 ENSNGAG00000022920 ENSNGAG00000022758 ENSNGAG00000021770 ENSNGAG00000012268 ENSNGAG00000016586 Dapk1 (ENSNGAG00000023610) ENSNGAG00000023296 ##22 ENSNGAG00000023443 ##22 ENSNGAG00000001073 ##22 ENSNGAG00000006724 ##22 ENSNGAG00000010869 Naa35 (ENSNGAG00000012706) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 60 Fam240b (ENSJJAG00000019963) ENSJJAG00000011401 ENSJJAG00000024373 Cdc14b (ENSJJAG00000002103) Habp4 (ENSJJAG00000015599) Zfp367 (ENSJJAG00000006992) Slc35d2 (ENSJJAG00000011235) Hsd17b3 (ENSJJAG00000001953) ENSJJAG00000018150 Ptch1 (ENSJJAG00000016228) Fancc (ENSJJAG00000001579) Aopep (ENSJJAG00000015878) Fbp1 (ENSJJAG00000010371) Fbp2 (ENSJJAG00000022384) ENSJJAG00000023768 ##22 ENSJJAG00000005732 ##22 Mfsd14b (ENSJJAG00000019365) ENSJJAG00000002085 Sh3yl1 (ENSJJAG00000012955) ENSJJAG00000015451 ENSJJAG00000002056 Alkal2 (ENSJJAG00000015616) Tmem18 (ENSJJAG00000019305) Sntg2 (ENSJJAG00000019414) Tpo (ENSJJAG00000020157) Pxdn (ENSJJAG00000014227) Myt1l (ENSJJAG00000007682) Eipr1 (ENSJJAG00000017270) Trappc12 (ENSJJAG00000020597) Adi1 (ENSJJAG00000015172) Rnaseh1 (ENSJJAG00000020238) Lesser Egyptian jerboa MODERN SPECIES 60 Adi1 (ENSJJAG00000015172) Trappc12 (ENSJJAG00000020597) Eipr1 (ENSJJAG00000017270) Myt1l (ENSJJAG00000007682) Pxdn (ENSJJAG00000014227) Tpo (ENSJJAG00000020157) Sntg2 (ENSJJAG00000019414) Tmem18 (ENSJJAG00000019305) Alkal2 (ENSJJAG00000015616) ENSJJAG00000002056 ENSJJAG00000015451 Sh3yl1 (ENSJJAG00000012955) ENSJJAG00000002085 Mfsd14b (ENSJJAG00000019365) ENSJJAG00000005732 ##22 ENSJJAG00000023768 ##22 Fbp2 (ENSJJAG00000022384) Fbp1 (ENSJJAG00000010371) Aopep (ENSJJAG00000015878) Fancc (ENSJJAG00000001579) Ptch1 (ENSJJAG00000016228) ENSJJAG00000018150 Hsd17b3 (ENSJJAG00000001953) Slc35d2 (ENSJJAG00000011235) Zfp367 (ENSJJAG00000006992) Habp4 (ENSJJAG00000015599) Cdc14b (ENSJJAG00000002103) ENSJJAG00000024373 ENSJJAG00000011401 Fam240b (ENSJJAG00000019963) Cntnap3 (ENSJJAG00000006453) Rodentia_A ANCESTRAL SPECIES 11 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.b ##22 Sciuridae ANCESTRAL SPECIES 6 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374.u ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.b ##22 Marmotini ANCESTRAL SPECIES 108 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374.u ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.b ##22 Alpin marmot MODERN SPECIES 68 RUFY2 (ENSMMMG00000009654) ENSMMMG00000009862 PBLD (ENSMMMG00000009871) ATOH7 (ENSMMMG00000010063) MYPN (ENSMMMG00000010068) HERC4 (ENSMMMG00000010126) ENSMMMG00000010229 ENSMMMG00000010250 CTNNA3 (ENSMMMG00000010289) LRRTM3 (ENSMMMG00000010362) ENSMMMG00000010382 ENSMMMG00000010389 ENSMMMG00000010403 REEP3 (ENSMMMG00000010412) DAPK1 (ENSMMMG00000010458) ENSMMMG00000010528 ##22 Marmotini_b ANCESTRAL SPECIES 246 ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.l.b ##22 Arctic ground squirrel MODERN SPECIES 302 NAA35 (ENSUPAG00010023699) GOLM1 (ENSUPAG00010023698) ENSUPAG00010023697 ISCA1 (ENSUPAG00010023696) TUT7 (ENSUPAG00010023694) GAS1 (ENSUPAG00010023687) DAPK1 (ENSUPAG00010023679) ENSUPAG00010023673 ##22 Eutheria ANCESTRAL SPECIES ENSGT00940000153321.b.b.k ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000153321.b.b.k ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000153321.b.b.k ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.k ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000153321.b.b.k ##22 Carnivora ANCESTRAL SPECIES ENSGT00940000153321.b.b.k ##22 Caniformia ANCESTRAL SPECIES ENSGT00940000153321.b.b.k ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000153321.b.b.k ##22 Ursidae ANCESTRAL SPECIES ENSGT00940000153321.b.b.k ##22 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 2016 ENSAMEG00000031138 ##22 Giant Panda MODERN SPECIES 1993 ENSAMEG00000030928 ##22 Felidae DUPLICATION Felidae ANCESTRAL SPECIES ENSGT00940000153321.b.b.k.c ##22 Panthera ANCESTRAL SPECIES ENSGT00940000153321.b.b.k.c ##22 Tiger MODERN SPECIES 348 NTRK2 (ENSPTIG00000009009) AGTPBP1 (ENSPTIG00000008705) NAA35 (ENSPTIG00000008606) GOLM1 (ENSPTIG00000008541) C9orf153 (ENSPTIG00000008399) ENSPTIG00000009857 ENSPTIG00000008360 TUT7 (ENSPTIG00000007881) DAPK1 (ENSPTIG00000006984) ENSPTIG00000006832 ENSPTIG00000006647 ##22 Panthera_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.k.c ##22 lion MODERN SPECIES 370 ENSPLOG00000017846 ##22 leopard MODERN SPECIES 94 ENSPPRG00000021194 PRXL2C (ENSPPRG00000021166) ENSPPRG00000021098 HABP4 (ENSPPRG00000020486) ZNF367 (ENSPPRG00000020267) SLC35D2 (ENSPPRG00000020058) HSD17B3 (ENSPPRG00000019886) ENSPPRG00000019238 PTCH1 (ENSPPRG00000019039) FANCC (ENSPPRG00000018311) AOPEP (ENSPPRG00000018024) FBP1 (ENSPPRG00000017781) FBP2 (ENSPPRG00000017726) ENSPPRG00000017692 ENSPPRG00000017629 ENSPPRG00000017508 ##22 ENSPPRG00000017460 ##22 ENSPPRG00000017238 ##22 ENSPPRG00000016997 #22 ENSPPRG00000015243 DAPK1 (ENSPPRG00000015066) ENSPPRG00000013927 GAS1 (ENSPPRG00000011967) TUT7 (ENSPPRG00000011084) ISCA1 (ENSPPRG00000010890) C9orf153 (ENSPPRG00000010876) GOLM1 (ENSPPRG00000010855) NAA35 (ENSPPRG00000010818) ENSPPRG00000010800 AGTPBP1 (ENSPPRG00000010671) NTRK2 (ENSPPRG00000010381) Felidae ANCESTRAL SPECIES 100 ENSGT00940000153321.b.b.k.d ##22 ENSGT00940000153321.b.b.l.a.b.a ##22 Panthera ANCESTRAL SPECIES 143 ENSGT00940000153321.b.b.k.d ##22 ENSGT00940000153321.b.b.l.a.b.a.a.a ##22 Tiger MODERN SPECIES 292 ENSPTIG00000005486 ##22 ENSPTIG00000005532 ##22 ENSPTIG00000005691 ##22 ENSPTIG00000005805 ENSPTIG00000006150 ENSPTIG00000006375 FBP2 (ENSPTIG00000006636) FBP1 (ENSPTIG00000006777) AOPEP (ENSPTIG00000007069) ENSPTIG00000007589 FANCC (ENSPTIG00000007601) PTCH1 (ENSPTIG00000007887) ENSPTIG00000009148 ENSPTIG00000009613 HSD17B3 (ENSPTIG00000009924) SLC35D2 (ENSPTIG00000010233) Panthera_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.k.d ##22 lion MODERN SPECIES 383 ENSPLOG00000019238 ##22 Cat MODERN SPECIES 88 ENSFCAG00000026329 ##22 ENSFCAG00000005706 ##22 Marsupialia ANCESTRAL SPECIES 6 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00390000011152 ENSGT00390000018344.i ENSGT00940000159054 ENSGT00940000157242 ENSGT00390000018619 ENSGT00940000158828 ENSGT00390000003453.a ENSGT00940000158028 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000157674 ENSGT00940000156081 Marsupialia_b ANCESTRAL SPECIES 18 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00390000011152 ENSGT00390000018344.i ENSGT00940000159054 ENSGT00940000157242 ENSGT00390000018619 ENSGT00940000158828 ENSGT00390000003453.a ENSGT00940000158028 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000157674 ENSGT00940000156081 Diprotodontia DUPLICATION Diprotodontia DUPLICATION Diprotodontia ANCESTRAL SPECIES 14 ENSGT00550000074817 ENSGT00940000156325 ENSGT00390000011152 ENSGT00390000018344.i ENSGT00940000159054.i ENSGT00940000157242 ENSGT00390000018619 ENSGT00940000158828 ENSGT00390000003453.a ENSGT00940000158028 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.e.b.b #22 ENSGT00940000153321.b.b.e.a #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000157674 ENSGT00940000156081 Diprotodontia_a ANCESTRAL SPECIES 13 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00390000018344.i ENSGT00940000159054.i ENSGT00940000157242 ENSGT00390000018619 ENSGT00940000158828 ENSGT00390000003453.a ENSGT00940000158028 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.e.b.b #22 ENSGT00940000153321.b.b.e.a #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154815.a.a.b ENSGT00530000065109.p koala DUPLICATION koala MODERN SPECIES 217 DAPK1 (ENSPCIG00000003658) ENSPCIG00000003703 #22 ENSPCIG00000019574 #22 ENSPCIG00000003712 #22 FBP2 (ENSPCIG00000003720) FBP1 (ENSPCIG00000003724) AOPEP (ENSPCIG00000003731) FANCC (ENSPCIG00000003753) PTCH1 (ENSPCIG00000028141) ENSPCIG00000015039 ENSPCIG00000020095 HSD17B3 (ENSPCIG00000011963) SLC35D2 (ENSPCIG00000011965) ZNF367 (ENSPCIG00000011966) HABP4 (ENSPCIG00000012647) ENSPCIG00000012650 PRXL2C (ENSPCIG00000012654) ENSPCIG00000012993 ENSPCIG00000013135 koala MODERN SPECIES 18 ENSPCIG00000014899 ENSPCIG00000036539 OR10S1 (ENSPCIG00000014893) OR6T1 (ENSPCIG00000014891) ENSPCIG00000035978 OR6X1 (ENSPCIG00000028224) ZNF202 (ENSPCIG00000031118) SCN3B (ENSPCIG00000002658) GRAMD1B (ENSPCIG00000002709) CLMP (ENSPCIG00000036965) BSX (ENSPCIG00000019710) JHY (ENSPCIG00000003894) CRTAM (ENSPCIG00000002839) UBASH3B (ENSPCIG00000002857) ENSPCIG00000006164 ENSPCIG00000006177 #22 SC5D (ENSPCIG00000006181) TECTA (ENSPCIG00000006191) TBCEL (ENSPCIG00000006246) GRIK4 (ENSPCIG00000006247) ARHGEF12 (ENSPCIG00000015198) TLCD5 (ENSPCIG00000018079) POU2F3 (ENSPCIG00000018077) OAF (ENSPCIG00000018076) TRIM29 (ENSPCIG00000030589) NECTIN1 (ENSPCIG00000031350) THY1 (ENSPCIG00000022493) USP2 (ENSPCIG00000022496) MFRP (ENSPCIG00000022502) C1QTNF5 (ENSPCIG00000022506) RNF26 (ENSPCIG00000022507) Common wonbat MODERN SPECIES 1043 CHMP5 (ENSVURG00010009678) NFX1 (ENSVURG00010009663) ENSVURG00010009657 ENSVURG00010009426 ENSVURG00010009397 AQP3 (ENSVURG00010009391) NOL6 (ENSVURG00010009342) UBE2R2 (ENSVURG00010009323) UBAP2 (ENSVURG00010009243) DCAF12 (ENSVURG00010009227) ISCA1 (ENSVURG00010009220) TUT7 (ENSVURG00010009174) GAS1 (ENSVURG00010009126) DAPK1 (ENSVURG00010009082) ENSVURG00010009051 #22 ENSVURG00010009043 #22 FBP2 (ENSVURG00010009012) ENSVURG00010009003 ENSVURG00010008957 ENSVURG00010008944 AOPEP (ENSVURG00010008898) ENSVURG00010008849 PTCH1 (ENSVURG00010008737) ENSVURG00010008678 HSD17B3 (ENSVURG00010008649) SLC35D2 (ENSVURG00010008615) ZNF367 (ENSVURG00010008593) HABP4 (ENSVURG00010008580) ENSVURG00010008524 PRXL2C (ENSVURG00010008497) ENSVURG00010008474 Wallaby DUPLICATION Wallaby MODERN SPECIES 14170 ENSMEUG00000014293 #22 Wallaby MODERN SPECIES 182 ENSMEUG00000015340 #22 Diprotodontia DUPLICATION Diprotodontia ANCESTRAL SPECIES ENSGT00940000153321.b.b.e.b.a #22 Wallaby MODERN SPECIES 283 ENSMEUG00000009402 #22 ENSMEUG00000009387 #22 Diprotodontia_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.e.b.a #22 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 582 ENSVURG00010018737 #22 Common wonbat MODERN SPECIES 665 ENSVURG00010008055 #22 koala DUPLICATION koala MODERN SPECIES 648 ENSPCIG00000030820 #22 koala MODERN SPECIES 217 DAPK1 (ENSPCIG00000003658) ENSPCIG00000003703 #22 ENSPCIG00000019574 #22 ENSPCIG00000003712 #22 FBP2 (ENSPCIG00000003720) FBP1 (ENSPCIG00000003724) AOPEP (ENSPCIG00000003731) FANCC (ENSPCIG00000003753) PTCH1 (ENSPCIG00000028141) ENSPCIG00000015039 ENSPCIG00000020095 HSD17B3 (ENSPCIG00000011963) SLC35D2 (ENSPCIG00000011965) ZNF367 (ENSPCIG00000011966) HABP4 (ENSPCIG00000012647) ENSPCIG00000012650 PRXL2C (ENSPCIG00000012654) ENSPCIG00000012993 Diprotodontia ANCESTRAL SPECIES 14 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00390000011152 ENSGT00390000018344.i ENSGT00940000159054.i ENSGT00940000157242 ENSGT00390000018619 ENSGT00940000158828 ENSGT00390000003453.a ENSGT00940000158028 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.e.b.b #22 ENSGT00940000153321.b.b.e.a #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000157674 Diprotodontia_a ANCESTRAL SPECIES 13 ENSGT01040000241496 ENSGT00450000040296 ENSGT00550000074817 ENSGT00940000156325 ENSGT00390000018344.i ENSGT00940000159054.i ENSGT00940000157242 ENSGT00390000018619 ENSGT00940000158828 ENSGT00390000003453.a ENSGT00940000158028 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.e.b.b #22 ENSGT00940000153321.b.b.e.a #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154815.a.a.b koala MODERN SPECIES 217 DAPK1 (ENSPCIG00000003658) ENSPCIG00000003703 #22 ENSPCIG00000019574 #22 ENSPCIG00000003712 #22 FBP2 (ENSPCIG00000003720) FBP1 (ENSPCIG00000003724) AOPEP (ENSPCIG00000003731) FANCC (ENSPCIG00000003753) PTCH1 (ENSPCIG00000028141) ENSPCIG00000015039 ENSPCIG00000020095 HSD17B3 (ENSPCIG00000011963) SLC35D2 (ENSPCIG00000011965) ZNF367 (ENSPCIG00000011966) HABP4 (ENSPCIG00000012647) ENSPCIG00000012650 PRXL2C (ENSPCIG00000012654) Common wonbat MODERN SPECIES 1043 ENSVURG00010009691 CHMP5 (ENSVURG00010009678) NFX1 (ENSVURG00010009663) ENSVURG00010009657 ENSVURG00010009426 ENSVURG00010009397 AQP3 (ENSVURG00010009391) NOL6 (ENSVURG00010009342) UBE2R2 (ENSVURG00010009323) UBAP2 (ENSVURG00010009243) DCAF12 (ENSVURG00010009227) ISCA1 (ENSVURG00010009220) TUT7 (ENSVURG00010009174) GAS1 (ENSVURG00010009126) DAPK1 (ENSVURG00010009082) ENSVURG00010009051 #22 ENSVURG00010009043 #22 FBP2 (ENSVURG00010009012) ENSVURG00010009003 ENSVURG00010008957 ENSVURG00010008944 AOPEP (ENSVURG00010008898) ENSVURG00010008849 PTCH1 (ENSVURG00010008737) ENSVURG00010008678 HSD17B3 (ENSVURG00010008649) SLC35D2 (ENSVURG00010008615) ZNF367 (ENSVURG00010008593) HABP4 (ENSVURG00010008580) ENSVURG00010008524 PRXL2C (ENSVURG00010008497) Diprotodontia ANCESTRAL SPECIES ENSGT00940000153321.b.b.f #22 Wallaby DUPLICATION Wallaby DUPLICATION Wallaby DUPLICATION Wallaby DUPLICATION Wallaby MODERN SPECIES 14865 ENSMEUG00000000164 #22 Wallaby MODERN SPECIES 10668 ENSMEUG00000003064 #22 Wallaby MODERN SPECIES 283 ENSMEUG00000009387 #22 ENSMEUG00000009402 #22 Wallaby DUPLICATION Wallaby MODERN SPECIES 11737 ENSMEUG00000016209 #22 Wallaby MODERN SPECIES 14705 ENSMEUG00000016089 #22 Wallaby MODERN SPECIES 11867 ENSMEUG00000002168 #22 Tasmanian devil DUPLICATION Tasmanian devil MODERN SPECIES ENSSHAG00000029732 SPINK4 (ENSSHAG00000009832) ENSSHAG00000009983 CHMP5 (ENSSHAG00000026378) NFX1 (ENSSHAG00000010272) ENSSHAG00000023110 AQP3 (ENSSHAG00000003176) ENSSHAG00000004050 ENSSHAG00000021881 ENSSHAG00000005250 ENSSHAG00000007658 ENSSHAG00000029182 TUT7 (ENSSHAG00000008290) GAS1 (ENSSHAG00000029300) ENSSHAG00000006828 ENSSHAG00000008692 #22 ENSSHAG00000025516 #22 ENSSHAG00000030991 ENSSHAG00000030168 AOPEP (ENSSHAG00000010555) FANCC (ENSSHAG00000013222) PTCH1 (ENSSHAG00000014543) ENSSHAG00000031181 HSD17B3 (ENSSHAG00000007500) ZNF367 (ENSSHAG00000031979) HABP4 (ENSSHAG00000009392) ENSSHAG00000009715 ENSSHAG00000010551 ENSSHAG00000031933 ENSSHAG00000003296 ENSSHAG00000031187 Tasmanian devil MODERN SPECIES SPINK4 (ENSSHAG00000009832) ENSSHAG00000009983 CHMP5 (ENSSHAG00000026378) NFX1 (ENSSHAG00000010272) ENSSHAG00000023110 AQP3 (ENSSHAG00000003176) ENSSHAG00000004050 ENSSHAG00000021881 ENSSHAG00000005250 ENSSHAG00000007658 ENSSHAG00000029182 TUT7 (ENSSHAG00000008290) GAS1 (ENSSHAG00000029300) ENSSHAG00000006828 ENSSHAG00000008692 #22 ENSSHAG00000025516 #22 ENSSHAG00000030991 ENSSHAG00000030168 AOPEP (ENSSHAG00000010555) FANCC (ENSSHAG00000013222) PTCH1 (ENSSHAG00000014543) ENSSHAG00000031181 HSD17B3 (ENSSHAG00000007500) ZNF367 (ENSSHAG00000031979) HABP4 (ENSSHAG00000009392) ENSSHAG00000009715 ENSSHAG00000010551 ENSSHAG00000031933 ENSSHAG00000003296 ENSSHAG00000031187 ENSSHAG00000002005 Opossum DUPLICATION Opossum DUPLICATION Opossum MODERN SPECIES 5 ENSMODG00000003845 ENSMODG00000025351 ENSMODG00000027501 AQP3 (ENSMODG00000003825) NOL6 (ENSMODG00000003802) UBE2R2 (ENSMODG00000003686) UBAP2 (ENSMODG00000003674) ENSMODG00000029756 DCAF12 (ENSMODG00000003585) ISCA1 (ENSMODG00000003559) TUT7 (ENSMODG00000003542) ENSMODG00000044220 GAS1 (ENSMODG00000003495) DAPK1 (ENSMODG00000003480) ENSMODG00000048938 ENSMODG00000048250 #22 ENSMODG00000002844 #22 ENSMODG00000047829 #22 FBP2 (ENSMODG00000002818) FBP1 (ENSMODG00000045062) AOPEP (ENSMODG00000002798) FANCC (ENSMODG00000002781) ENSMODG00000051440 PTCH1 (ENSMODG00000002769) ENSMODG00000002718 ENSMODG00000048350 SLC35D2 (ENSMODG00000000488) ZNF367 (ENSMODG00000038408) HABP4 (ENSMODG00000000514) ENSMODG00000000544 PRXL2C (ENSMODG00000036541) Opossum MODERN SPECIES 5 ENSMODG00000027501 AQP3 (ENSMODG00000003825) NOL6 (ENSMODG00000003802) UBE2R2 (ENSMODG00000003686) UBAP2 (ENSMODG00000003674) ENSMODG00000029756 DCAF12 (ENSMODG00000003585) ISCA1 (ENSMODG00000003559) TUT7 (ENSMODG00000003542) ENSMODG00000044220 GAS1 (ENSMODG00000003495) DAPK1 (ENSMODG00000003480) ENSMODG00000048938 ENSMODG00000048250 #22 ENSMODG00000002844 #22 ENSMODG00000047829 #22 FBP2 (ENSMODG00000002818) FBP1 (ENSMODG00000045062) AOPEP (ENSMODG00000002798) FANCC (ENSMODG00000002781) ENSMODG00000051440 PTCH1 (ENSMODG00000002769) ENSMODG00000002718 ENSMODG00000048350 SLC35D2 (ENSMODG00000000488) ZNF367 (ENSMODG00000038408) HABP4 (ENSMODG00000000514) ENSMODG00000000544 PRXL2C (ENSMODG00000036541) TDGF1 (ENSMODG00000041568) LRRC2 (ENSMODG00000000566) Opossum MODERN SPECIES 5 ENSMODG00000025351 ENSMODG00000027501 AQP3 (ENSMODG00000003825) NOL6 (ENSMODG00000003802) UBE2R2 (ENSMODG00000003686) UBAP2 (ENSMODG00000003674) ENSMODG00000029756 DCAF12 (ENSMODG00000003585) ISCA1 (ENSMODG00000003559) TUT7 (ENSMODG00000003542) ENSMODG00000044220 GAS1 (ENSMODG00000003495) DAPK1 (ENSMODG00000003480) ENSMODG00000048938 ENSMODG00000048250 #22 ENSMODG00000002844 #22 ENSMODG00000047829 #22 FBP2 (ENSMODG00000002818) FBP1 (ENSMODG00000045062) AOPEP (ENSMODG00000002798) FANCC (ENSMODG00000002781) ENSMODG00000051440 PTCH1 (ENSMODG00000002769) ENSMODG00000002718 ENSMODG00000048350 SLC35D2 (ENSMODG00000000488) ZNF367 (ENSMODG00000038408) HABP4 (ENSMODG00000000514) ENSMODG00000000544 PRXL2C (ENSMODG00000036541) TDGF1 (ENSMODG00000041568) Platypus DUPLICATION Platypus DUPLICATION Platypus DUPLICATION Platypus MODERN SPECIES 88 ENSOANG00000049078 ENSOANG00000000203 ENSOANG00000049510 ENSOANG00000006821 ENSOANG00000050874 ENSOANG00000038173 ENSOANG00000037044 ENSOANG00000037583 ENSOANG00000046504 ENSOANG00000043122 ENSOANG00000041825 ENSOANG00000036615 ENSOANG00000042346 H1-1 (ENSOANG00000050321) ENSOANG00000039485 ENSOANG00000045994 #22 ENSOANG00000040130 ENSOANG00000045306 ENSOANG00000038051 ENSOANG00000038321 ENSOANG00000048075 ENSOANG00000047142 ENSOANG00000037816 ENSOANG00000045607 ENSOANG00000037825 ENSOANG00000051301 ENSOANG00000045094 ENSOANG00000038387 ENSOANG00000045700 ENSOANG00000039935 ENSOANG00000000173 Platypus MODERN SPECIES 88 ENSOANG00000049510 ENSOANG00000000203 ENSOANG00000049078 ENSOANG00000000206 ENSOANG00000000207 ENSOANG00000000208 ENSOANG00000000209 ENSOANG00000000214 ENSOANG00000040795 ENSOANG00000041663 ENSOANG00000045836 ENSOANG00000038023 ENSOANG00000050854 ENSOANG00000050360 ENSOANG00000045256 ENSOANG00000040147 #22 ENSOANG00000045877 ENSOANG00000000219 ENSOANG00000047522 ENSOANG00000038285 ENSOANG00000047856 ENSOANG00000050887 ENSOANG00000040521 ENSOANG00000039179 ENSOANG00000044108 ENSOANG00000050614 ENSOANG00000036855 ENSOANG00000051035 ENSOANG00000049861 ENSOANG00000046437 ENSOANG00000037672 Platypus MODERN SPECIES 46 ENSOANG00000047279 #22 Platypus MODERN SPECIES 88 IDNK (ENSOANG00000037832) UBQLN1 (ENSOANG00000010928) GKAP1 (ENSOANG00000010900) ENSOANG00000006741 C9orf64 (ENSOANG00000042188) HNRNPK (ENSOANG00000014612) RMI1 (ENSOANG00000010899) SLC28A3 (ENSOANG00000048714) NTRK2 (ENSOANG00000004039) AGTPBP1 (ENSOANG00000013047) NAA35 (ENSOANG00000020493) GOLM1 (ENSOANG00000048824) ISCA1 (ENSOANG00000049375) GAS1 (ENSOANG00000044163) DAPK1 (ENSOANG00000047162) ENSOANG00000010814 #22 ENSOANG00000040813 ENSOANG00000036519 ENSOANG00000040753 PTCH1 (ENSOANG00000013351) ENSOANG00000042611 ENSOANG00000044121 ENSOANG00000042894 ENSOANG00000048759 ENSOANG00000044838 ENSOANG00000045906 CKS2 (ENSOANG00000048069) Sauria ANCESTRAL SPECIES 5 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00530000069333 ENSGT00940000166301 Archelosauria ANCESTRAL SPECIES 7 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00530000069333 ENSGT00940000166301 Archosauria ANCESTRAL SPECIES 1 ENSGT00940000158010 ENSGT00940000160325.a ENSGT00940000157329.u.b ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.a.h ENSGT01030000234574.B.c.a.g ENSGT00940000160897 ENSGT00940000158223 ENSGT00940000155680.d ENSGT00900000143042 ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00530000069333 ENSGT00940000166301 ENSGT00940000162302 Aves ANCESTRAL SPECIES 4 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00900000143042 ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00530000069333 ENSGT00940000166301 ENSGT00940000162302 Neognathae ANCESTRAL SPECIES 19 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487.y ENSGT00390000002374 ENSGT00940000153434.b.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00530000069333 ENSGT00940000166301 ENSGT00940000162302 Galloanserae ANCESTRAL SPECIES 18 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487.y ENSGT00390000002374 ENSGT00940000153434.b.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00530000069333 ENSGT00940000162302 ENSGT00940000154960 Anatidae ANCESTRAL SPECIES 12 ENSGT00940000157487.y ENSGT00390000002374 ENSGT00940000153434.b.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT01070000253901.A.a.b ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859.h ENSGT00940000156859.g ENSGT00900000143042 ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000164262.a Pink-footed goose MODERN SPECIES 165 ENSABRG00000016275 ENSABRG00000016272 DAPK1 (ENSABRG00000016222) ENSABRG00000016213 #22 FBP2 (ENSABRG00000016205) FBP1 (ENSABRG00000016194) AOPEP (ENSABRG00000016187) FANCC (ENSABRG00000016174) PTCH1 (ENSABRG00000016160) ENSABRG00000016156 HSD17B3 (ENSABRG00000016146) SLC35D2 (ENSABRG00000016141) ZNF367 (ENSABRG00000016131) HABP4 (ENSABRG00000016119) ENSABRG00000016113 PRXL2C (ENSABRG00000016110) ENSABRG00000016100 ENSABRG00000016095 LRRC2 (ENSABRG00000016093) Duck MODERN SPECIES 4281 UBQLN1 (ENSAPLG00000014441) GKAP1 (ENSAPLG00000014453) ENSAPLG00000030886 C9orf64 (ENSAPLG00000020199) HNRNPK (ENSAPLG00000010986) RMI1 (ENSAPLG00000001220) SLC28A3 (ENSAPLG00000010433) NTRK2 (ENSAPLG00000009998) ENSAPLG00000022052 AGTPBP1 (ENSAPLG00000001395) NAA35 (ENSAPLG00000015844) GOLM1 (ENSAPLG00000016726) ISCA1 (ENSAPLG00000025576) TUT7 (ENSAPLG00000015510) DAPK1 (ENSAPLG00000014607) ENSAPLG00000014266 #22 FBP2 (ENSAPLG00000014181) FBP1 (ENSAPLG00000013867) AOPEP (ENSAPLG00000013767) FANCC (ENSAPLG00000013504) PTCH1 (ENSAPLG00000012739) ENSAPLG00000006105 HSD17B3 (ENSAPLG00000006227) SLC35D2 (ENSAPLG00000024320) ZNF367 (ENSAPLG00000025910) HABP4 (ENSAPLG00000008194) ENSAPLG00000007708 PRXL2C (ENSAPLG00000007699) ENSAPLG00000007613 LRRC2 (ENSAPLG00000007466) ENSAPLG00000005000 Phasianidae ANCESTRAL SPECIES 5 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487.y ENSGT00390000002374 ENSGT00940000153434.b.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211.w ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00530000069333 ENSGT00940000162302 ENSGT00940000154960 Japanese quail MODERN SPECIES 699 UBQLN1 (ENSCJPG00005009387) ENSCJPG00005009388 KIF27 (ENSCJPG00005009390) C9orf64 (ENSCJPG00005009409) HNRNPK (ENSCJPG00005009412) RMI1 (ENSCJPG00005009413) SLC28A3 (ENSCJPG00005009416) NTRK2 (ENSCJPG00005009418) AGTPBP1 (ENSCJPG00005009423) NAA35 (ENSCJPG00005009427) GOLM1 (ENSCJPG00005009428) ISCA1 (ENSCJPG00005009430) TUT7 (ENSCJPG00005009432) GAS1 (ENSCJPG00005009441) DAPK1 (ENSCJPG00005009444) ENSCJPG00005009446 #22 FBP2 (ENSCJPG00005009447) FBP1 (ENSCJPG00005009468) AOPEP (ENSCJPG00005009473) FANCC (ENSCJPG00005009479) PTCH1 (ENSCJPG00005009482) ENSCJPG00005009520 HSD17B3 (ENSCJPG00005009524) ZNF367 (ENSCJPG00005009525) ENSCJPG00005009526 PRXL2C (ENSCJPG00005009553) ENSCJPG00005009555 LRRC2 (ENSCJPG00005009556) ENSCJPG00005009558 NXNL2 (ENSCJPG00005009559) S1PR3 (ENSCJPG00005009562) Phasianidae_b ANCESTRAL SPECIES 5 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487.y ENSGT00390000002374 ENSGT00940000153434.b.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211.w ENSGT00940000155211.x ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00530000069333 ENSGT00940000162302 Chicken MODERN SPECIES 131 UBQLN1 (ENSGALG00010015628) GKAP1 (ENSGALG00010014537) KIF27 (ENSGALG00010014570) CZH9orf64 (ENSGALG00010014592) HNRNPK (ENSGALG00010014677) RMI1 (ENSGALG00010014737) SLC28A3 (ENSGALG00010015823) NTRK2 (ENSGALG00010010150) AGTPBP1 (ENSGALG00010008636) NAA35 (ENSGALG00010008699) GOLM1 (ENSGALG00010008752) ISCA1 (ENSGALG00010008213) ZCCHC6 (ENSGALG00010008231) GAS1 (ENSGALG00010010435) DAPK1 (ENSGALG00010009744) CTSV (ENSGALG00010010311) #22 FBP2 (ENSGALG00010010323) FBP1 (ENSGALG00010010327) ENSGALG00010010345 ENSGALG00010010369 ENSGALG00010010861 FANCC (ENSGALG00010010393) PTCH1 (ENSGALG00010010406) ERCC6L2 (ENSGALG00010010064) HSD17B3 (ENSGALG00010008777) ENSGALG00010008799 SLC35D2 (ENSGALG00010008846) ZNF367 (ENSGALG00010008862) HABP4 (ENSGALG00010008879) CDC14B (ENSGALG00010010844) AAED1 (ENSGALG00010008768) Turkey MODERN SPECIES 1299 ENSMGAG00000023025 ENSMGAG00000006314 RMI1 (ENSMGAG00000016052) SLC28A3 (ENSMGAG00000021465) NTRK2 (ENSMGAG00000006362) ENSMGAG00000021762 NAA35 (ENSMGAG00000016673) ENSMGAG00000021522 ENSMGAG00000019140 ENSMGAG00000021470 ENSMGAG00000006592 TUT7 (ENSMGAG00000006542) ENSMGAG00000006958 AOPEP (ENSMGAG00000006472) ENSMGAG00000020574 ENSMGAG00000006705 #22 ENSMGAG00000006572 ENSMGAG00000006547 ENSMGAG00000020170 ENSMGAG00000022956 ENSMGAG00000001888 ENSMGAG00000009455 ENSMGAG00000021387 ENSMGAG00000018206 ENSMGAG00000021017 ENSMGAG00000022962 ENSMGAG00000017732 NXNL2 (ENSMGAG00000022086) ENSMGAG00000002500 ENSMGAG00000013720 CKS2 (ENSMGAG00000002039) Neognathae_b ANCESTRAL SPECIES 5 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487.y ENSGT00390000002374 ENSGT00940000153434.b.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000166301 ENSGT00940000162302 ENSGT00940000154960 Neognathae_c ANCESTRAL SPECIES 2 ENSGT00940000156437.i.a ENSGT00390000008742.b ENSGT00940000157487.y ENSGT00390000002374 ENSGT00940000153434.b.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074.j ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000166301 ENSGT00940000162302 ENSGT00940000154960 Golden eagle MODERN SPECIES 91 GKAP1 (ENSACCG00020013838) ENSACCG00020013784 ENSACCG00020013764 C9orf64 (ENSACCG00020013750) ENSACCG00020013718 RMI1 (ENSACCG00020013695) SLC28A3 (ENSACCG00020013679) NTRK2 (ENSACCG00020013644) AGTPBP1 (ENSACCG00020013567) NAA35 (ENSACCG00020013496) GOLM1 (ENSACCG00020013446) ISCA1 (ENSACCG00020013425) TUT7 (ENSACCG00020013385) GAS1 (ENSACCG00020013353) DAPK1 (ENSACCG00020013294) ENSACCG00020013225 #22 FBP2 (ENSACCG00020013205) FBP1 (ENSACCG00020013185) AOPEP (ENSACCG00020013124) FANCC (ENSACCG00020013099) PTCH1 (ENSACCG00020012872) ENSACCG00020012453 HSD17B3 (ENSACCG00020012387) SLC35D2 (ENSACCG00020012319) ZNF367 (ENSACCG00020012262) HABP4 (ENSACCG00020012217) ENSACCG00020012179 PRXL2C (ENSACCG00020012119) ENSACCG00020012070 ENSACCG00020012040 LRRC2 (ENSACCG00020012017) Kakapo MODERN SPECIES 19 C9orf64 (ENSSHBG00005020551) HNRNPK (ENSSHBG00005020544) RMI1 (ENSSHBG00005020541) SLC28A3 (ENSSHBG00005020535) NTRK2 (ENSSHBG00005020531) AGTPBP1 (ENSSHBG00005020515) NAA35 (ENSSHBG00005020499) GOLM1 (ENSSHBG00005020496) ISCA1 (ENSSHBG00005020492) ENSSHBG00005020486 ENSSHBG00005020480 ENSSHBG00005020476 ENSSHBG00005020474 GAS1 (ENSSHBG00005020473) DAPK1 (ENSSHBG00005020467) ENSSHBG00005020460 #22 FBP2 (ENSSHBG00005020458) FBP1 (ENSSHBG00005020457) AOPEP (ENSSHBG00005020450) FANCC (ENSSHBG00005020443) PTCH1 (ENSSHBG00005020292) HSD17B3 (ENSSHBG00005020235) SLC35D2 (ENSSHBG00005020231) ENSSHBG00005020226 HABP4 (ENSSHBG00005020222) ENSSHBG00005020213 PRXL2C (ENSSHBG00005020210) ENSSHBG00005020206 LRRC2 (ENSSHBG00005020204) CNTNAP4 (ENSSHBG00005019059) ENSSHBG00005018923 Passeriformes ANCESTRAL SPECIES 7 ENSGT00390000003364 ENSGT00940000156437.i ENSGT00940000157487.y ENSGT00390000002374 ENSGT00940000153434.b.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 ENSGT00940000156081.b Great tit MODERN SPECIES 642 IDNK (ENSPMJG00000000156) UBQLN1 (ENSPMJG00000000186) KIF27 (ENSPMJG00000000292) C9orf64 (ENSPMJG00000000424) HNRNPK (ENSPMJG00000000432) RMI1 (ENSPMJG00000000461) SLC28A3 (ENSPMJG00000000468) NTRK2 (ENSPMJG00000000584) AGTPBP1 (ENSPMJG00000000623) NAA35 (ENSPMJG00000000648) GOLM1 (ENSPMJG00000000666) ISCA1 (ENSPMJG00000000682) TUT7 (ENSPMJG00000000807) GAS1 (ENSPMJG00000000833) DAPK1 (ENSPMJG00000000930) ENSPMJG00000001032 #22 FBP2 (ENSPMJG00000001047) FBP1 (ENSPMJG00000001101) AOPEP (ENSPMJG00000001239) FANCC (ENSPMJG00000001330) PTCH1 (ENSPMJG00000001356) ENSPMJG00000001440 SLC35D2 (ENSPMJG00000001468) ZNF367 (ENSPMJG00000001504) ENSPMJG00000001557 ENSPMJG00000001575 PRXL2C (ENSPMJG00000001599) ENSPMJG00000001615 LRRC2 (ENSPMJG00000001626) CNTNAP4 (ENSPMJG00000001771) MFSD14B (ENSPMJG00000001868) Passeriformes_d ANCESTRAL SPECIES 6 ENSGT00390000003364 ENSGT00940000156437.i ENSGT00940000157487.y ENSGT00390000002374 ENSGT00940000153434.b.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b.v ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 ENSGT00940000156081.b Passeriformes_g ANCESTRAL SPECIES 7 ENSGT00390000003364 ENSGT00940000156437.i ENSGT00940000157487.y ENSGT00390000002374 ENSGT00940000153434.b.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b.v ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 ENSGT00940000156081.b Passeroidea ANCESTRAL SPECIES 23 ENSGT00390000003364 ENSGT00940000156437.i ENSGT00940000157487.y ENSGT00390000002374 ENSGT00940000153434.b.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b.v ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 ENSGT00940000156081.b Common canary MODERN SPECIES 54 FRMD3 (ENSSCAG00000004780) IDNK (ENSSCAG00000004774) UBQLN1 (ENSSCAG00000004695) KIF27 (ENSSCAG00000004587) C9orf64 (ENSSCAG00000004571) ENSSCAG00000004563 RMI1 (ENSSCAG00000004559) SLC28A3 (ENSSCAG00000004545) NTRK2 (ENSSCAG00000004537) AGTPBP1 (ENSSCAG00000004518) NAA35 (ENSSCAG00000004504) GOLM1 (ENSSCAG00000004496) ISCA1 (ENSSCAG00000004489) TUT7 (ENSSCAG00000004476) DAPK1 (ENSSCAG00000004396) ENSSCAG00000004370 #22 FBP2 (ENSSCAG00000004368) FBP1 (ENSSCAG00000004365) AOPEP (ENSSCAG00000004354) FANCC (ENSSCAG00000004343) PTCH1 (ENSSCAG00000003709) ENSSCAG00000003578 SLC35D2 (ENSSCAG00000003562) ZNF367 (ENSSCAG00000003557) HABP4 (ENSSCAG00000003552) ENSSCAG00000003451 PRXL2C (ENSSCAG00000003424) Zebra finch MODERN SPECIES 104 TRPM3 (ENSTGUG00000000853) KLF9 (ENSTGUG00000024149) ENSTGUG00000015215 SMC5 (ENSTGUG00000000881) MAMDC2 (ENSTGUG00000000888) ENSTGUG00000014232 CDK7 (ENSTGUG00000014190) MRPS36 (ENSTGUG00000014188) CENPH (ENSTGUG00000014185) ENSTGUG00000021761 SLC30A5 (ENSTGUG00000000636) ISCA1 (ENSTGUG00000000630) TUT7 (ENSTGUG00000000624) GAS1 (ENSTGUG00000000623) DAPK1 (ENSTGUG00000000606) ENSTGUG00000000598 #22 FBP1 (ENSTGUG00000000579) AOPEP (ENSTGUG00000000565) FANCC (ENSTGUG00000000552) PTCH1 (ENSTGUG00000000532) ENSTGUG00000000524 SLC35D2 (ENSTGUG00000000518) ZNF367 (ENSTGUG00000000513) HABP4 (ENSTGUG00000000508) ENSTGUG00000000501 ENSTGUG00000000498 LRRC2 (ENSTGUG00000000492) CNTNAP4 (ENSTGUG00000000478) MFSD14B (ENSTGUG00000000471) ENSTGUG00000000468 NXNL2 (ENSTGUG00000000467) Medium ground finch MODERN SPECIES 130 NAA35 (ENSGFOG00000013601) GOLM1 (ENSGFOG00000013605) ISCA1 (ENSGFOG00000013607) TUT7 (ENSGFOG00000013609) ENSGFOG00000013629 ENSGFOG00000013641 #22 FBP2 (ENSGFOG00000013642) FBP1 (ENSGFOG00000013646) AOPEP (ENSGFOG00000013651) FANCC (ENSGFOG00000013678) ENSGFOG00000013685 PTCH1 (ENSGFOG00000013747) ENSGFOG00000014126 SLC35D2 (ENSGFOG00000009510) ZNF367 (ENSGFOG00000009529) ENSGFOG00000009543 HABP4 (ENSGFOG00000009550) ENSGFOG00000009582 PRXL2C (ENSGFOG00000009680) ENSGFOG00000009683 LRRC2 (ENSGFOG00000009689) Flycatcher MODERN SPECIES 561 GCNT1 (ENSFALG00000014568) PRUNE2 (ENSFALG00000028604) FOXB2 (ENSFALG00000003253) VPS13A (ENSFALG00000003265) ENSFALG00000003294 CEP78 (ENSFALG00000003321) PSAT1 (ENSFALG00000003335) ENSFALG00000003611 AGTPBP1 (ENSFALG00000003605) NAA35 (ENSFALG00000003574) GOLM1 (ENSFALG00000003560) ISCA1 (ENSFALG00000028644) TUT7 (ENSFALG00000003541) GAS1 (ENSFALG00000015250) DAPK1 (ENSFALG00000003534) ENSFALG00000003529 #22 FBP2 (ENSFALG00000003525) FBP1 (ENSFALG00000003518) AOPEP (ENSFALG00000003512) FANCC (ENSFALG00000003492) PTCH1 (ENSFALG00000003449) ENSFALG00000003400 SLC35D2 (ENSFALG00000003362) ZNF367 (ENSFALG00000026790) HABP4 (ENSFALG00000003327) ENSFALG00000003300 PRXL2C (ENSFALG00000003281) ENSFALG00000003245 ENSFALG00000003233 ENSFALG00000025695 ENSFALG00000012353 African ostrich DUPLICATION African ostrich DUPLICATION African ostrich MODERN SPECIES 547 ENSSCUG00000006320 ENSSCUG00000006325 #22 FBP2 (ENSSCUG00000006327) ENSSCUG00000006331 AOPEP (ENSSCUG00000006334) African ostrich MODERN SPECIES 522 ENSSCUG00000003726 ENSSCUG00000003725 #22 ENSSCUG00000003724 ENSSCUG00000003722 #22 ENSSCUG00000003721 ENSSCUG00000003719 African ostrich MODERN SPECIES 522 ENSSCUG00000003726 ENSSCUG00000003725 #22 ENSSCUG00000003724 ENSSCUG00000003722 #22 ENSSCUG00000003721 ENSSCUG00000003719 Australian saltwater crocodile MODERN SPECIES 67 GAS1 (ENSCPRG00005009919) DAPK1 (ENSCPRG00005009938) ENSCPRG00005009953 #22 FBP1 (ENSCPRG00005009957) AOPEP (ENSCPRG00005009992) FANCC (ENSCPRG00005010001) PTCH1 (ENSCPRG00005010014) ENSCPRG00005010038 ENSCPRG00005010078 HSD17B3 (ENSCPRG00005010085) SLC35D2 (ENSCPRG00005010116) ZNF367 (ENSCPRG00005010128) HABP4 (ENSCPRG00005010131) ENSCPRG00005010138 PRXL2C (ENSCPRG00005010147) ENSCPRG00005010154 LRRC2 (ENSCPRG00005010158) ENSCPRG00005010168 Cryptodira ANCESTRAL SPECIES 9 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000166301 ENSGT00940000162302 Testudinoidea ANCESTRAL SPECIES 7 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000156859 ENSGT00490000043385 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000166301 ENSGT00940000162302 ENSGT00940000159076 Emydidae ANCESTRAL SPECIES 20 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000166301 ENSGT00940000162302 ENSGT00940000159076 Three-toed box turtle MODERN SPECIES 50 IDNK (ENSTMTG00000017082) UBQLN1 (ENSTMTG00000017089) GKAP1 (ENSTMTG00000017106) KIF27 (ENSTMTG00000017119) C9orf64 (ENSTMTG00000017197) HNRNPK (ENSTMTG00000017209) RMI1 (ENSTMTG00000017265) SLC28A3 (ENSTMTG00000017272) AGTPBP1 (ENSTMTG00000017349) NAA35 (ENSTMTG00000017730) GOLM1 (ENSTMTG00000017769) TUT7 (ENSTMTG00000017843) ISCA1 (ENSTMTG00000019131) GAS1 (ENSTMTG00000019139) ENSTMTG00000019148 ENSTMTG00000019160 #22 FBP2 (ENSTMTG00000019185) FBP1 (ENSTMTG00000019197) AOPEP (ENSTMTG00000019213) FANCC (ENSTMTG00000019262) PTCH1 (ENSTMTG00000019304) ENSTMTG00000019364 HSD17B3 (ENSTMTG00000019390) SLC35D2 (ENSTMTG00000019445) ZNF367 (ENSTMTG00000019468) HABP4 (ENSTMTG00000019479) ENSTMTG00000019501 PRXL2C (ENSTMTG00000019635) ENSTMTG00000019650 ENSTMTG00000019671 ENSTMTG00000014342 painted turtle MODERN SPECIES 2400 ENSCPBG00000005080 PIGC (ENSCPBG00000005095) SUCO (ENSCPBG00000005112) FASLG (ENSCPBG00000005130) ENSCPBG00000005137 ENSCPBG00000005147 AGTPBP1 (ENSCPBG00000005173) NAA35 (ENSCPBG00000005227) GOLM1 (ENSCPBG00000005240) ENSCPBG00000005252 TUT7 (ENSCPBG00000005272) ENSCPBG00000005285 ENSCPBG00000005292 GAS1 (ENSCPBG00000005303) DAPK1 (ENSCPBG00000005312) ENSCPBG00000005334 #22 FBP1 (ENSCPBG00000005339) AOPEP (ENSCPBG00000005352) FANCC (ENSCPBG00000005369) PTCH1 (ENSCPBG00000005393) ENSCPBG00000005414 HSD17B3 (ENSCPBG00000005430) SLC35D2 (ENSCPBG00000005433) ENSCPBG00000005437 ZNF367 (ENSCPBG00000005439) HABP4 (ENSCPBG00000005444) PRXL2C (ENSCPBG00000005459) ENSCPBG00000005486 CNTNAP4 (ENSCPBG00000005516) MFSD14B (ENSCPBG00000005536) ENSCPBG00000005543 Testudinidae ANCESTRAL SPECIES 15 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000156859 ENSGT00490000043385 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 Abingdon island giant tortoise MODERN SPECIES 158 ENSCABG00000014739 ENSCABG00000014737 TUT7 (ENSCABG00000014704) ENSCABG00000014702 GAS1 (ENSCABG00000014701) DAPK1 (ENSCABG00000014698) ENSCABG00000014695 #22 FBP2 (ENSCABG00000014693) FBP1 (ENSCABG00000014668) Goode s thornscrub tortoise MODERN SPECIES 20 C9orf64 (ENSGEVG00005017966) HNRNPK (ENSGEVG00005017980) RMI1 (ENSGEVG00005018000) SLC28A3 (ENSGEVG00005018071) NTRK2 (ENSGEVG00005018338) AGTPBP1 (ENSGEVG00005018465) NAA35 (ENSGEVG00005018549) ENSGEVG00005018605 ENSGEVG00005018616 ENSGEVG00005018634 ENSGEVG00005018648 TUT7 (ENSGEVG00005018682) ENSGEVG00005018735 GAS1 (ENSGEVG00005018746) DAPK1 (ENSGEVG00005001216) ENSGEVG00005001271 #22 FBP2 (ENSGEVG00005001295) FBP1 (ENSGEVG00005001322) AOPEP (ENSGEVG00005001365) FANCC (ENSGEVG00005001452) PTCH1 (ENSGEVG00005001498) ENSGEVG00005001564 HSD17B3 (ENSGEVG00005001787) SLC35D2 (ENSGEVG00005001873) ZNF367 (ENSGEVG00005001896) HABP4 (ENSGEVG00005001921) ENSGEVG00005001994 PRXL2C (ENSGEVG00005002075) ENSGEVG00005002135 LRRC2 (ENSGEVG00005002189) SASS6 (ENSGEVG00005002210) Chinese turtle MODERN SPECIES 2084 GKAP1 (ENSPSIG00000003443) KIF27 (ENSPSIG00000003453) C9orf64 (ENSPSIG00000003466) HNRNPK (ENSPSIG00000003480) RMI1 (ENSPSIG00000001880) SLC28A3 (ENSPSIG00000003501) NTRK2 (ENSPSIG00000003535) ENSPSIG00000001886 AGTPBP1 (ENSPSIG00000003549) NAA35 (ENSPSIG00000003554) GOLM1 (ENSPSIG00000003590) ENSPSIG00000003592 TUT7 (ENSPSIG00000003600) ENSPSIG00000003637 DAPK1 (ENSPSIG00000003652) ENSPSIG00000003700 #22 FBP2 (ENSPSIG00000003705) FBP1 (ENSPSIG00000003744) AOPEP (ENSPSIG00000003750) FANCC (ENSPSIG00000003801) Lepidosauria ANCESTRAL SPECIES 1 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 Episquamata ANCESTRAL SPECIES 6 ENSGT00390000008742 ENSGT00940000157487.db ENSGT00940000157487.eb ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 Toxicofera ANCESTRAL SPECIES 6 ENSGT00390000008742 ENSGT00940000157487.db ENSGT00940000157487.eb ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 Elapidae ANCESTRAL SPECIES 7 ENSGT00390000008742 ENSGT00940000157487.db ENSGT00940000157487.eb ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 Elapidae_a ANCESTRAL SPECIES 9 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487.eb ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011.c ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 Acanthophiinae ANCESTRAL SPECIES 9 ENSGT00940000156437.i ENSGT00390000008742 ENSGT00940000157487.eb ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011.c ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 Mainland tiger snake MODERN SPECIES 1 C9orf64 (ENSNSUG00000014459) HNRNPK (ENSNSUG00000014458) ENSNSUG00000014457 SLC28A3 (ENSNSUG00000014456) ENSNSUG00000014455 NTRK2 (ENSNSUG00000014454) AGTPBP1 (ENSNSUG00000014453) NAA35 (ENSNSUG00000014452) ENSNSUG00000014451 ISCA1 (ENSNSUG00000014450) ENSNSUG00000014449 GAS1 (ENSNSUG00000014372) ENSNSUG00000014371 ENSNSUG00000014368 ENSNSUG00000014367 ENSNSUG00000014366 #22 FBP2 (ENSNSUG00000014365) FBP1 (ENSNSUG00000014364) ENSNSUG00000014363 ENSNSUG00000014361 FANCC (ENSNSUG00000014357) PTCH1 (ENSNSUG00000014356) ENSNSUG00000014355 HSD17B3 (ENSNSUG00000014354) SLC35D2 (ENSNSUG00000014353) ZNF367 (ENSNSUG00000014352) HABP4 (ENSNSUG00000014351) ENSNSUG00000014350 PRXL2C (ENSNSUG00000014349) ENSNSUG00000014348 LRRC2 (ENSNSUG00000014347) Eastern brown snake MODERN SPECIES 23 GKAP1 (ENSPTXG00000011073) ENSPTXG00000011076 ENSPTXG00000011078 C9orf64 (ENSPTXG00000011079) HNRNPK (ENSPTXG00000011080) ENSPTXG00000011081 SLC28A3 (ENSPTXG00000011082) NTRK2 (ENSPTXG00000011162) AGTPBP1 (ENSPTXG00000011166) NAA35 (ENSPTXG00000011169) ENSPTXG00000011172 ISCA1 (ENSPTXG00000011173) TUT7 (ENSPTXG00000011175) GAS1 (ENSPTXG00000011177) DAPK1 (ENSPTXG00000011178) ENSPTXG00000011179 #22 FBP2 (ENSPTXG00000011180) FBP1 (ENSPTXG00000011182) ENSPTXG00000011183 ENSPTXG00000011184 FANCC (ENSPTXG00000011187) PTCH1 (ENSPTXG00000011192) ENSPTXG00000011245 SLC35D2 (ENSPTXG00000011247) ZNF367 (ENSPTXG00000011251) HABP4 (ENSPTXG00000011254) ENSPTXG00000011263 PRXL2C (ENSPTXG00000011272) ENSPTXG00000011281 LRRC2 (ENSPTXG00000011286) CNTNAP4 (ENSPTXG00000011311) Blue-lipped sea krait MODERN SPECIES 9782 ENSLLTG00000010000 #22 Indian cobra MODERN SPECIES 1 ENSNNAG00000016804 ENSNNAG00000016807 ENSNNAG00000016811 HNRNPK (ENSNNAG00000016818) ENSNNAG00000016839 SLC28A3 (ENSNNAG00000016856) NTRK2 (ENSNNAG00000016907) ENSNNAG00000016930 NAA35 (ENSNNAG00000016955) GOLM1 (ENSNNAG00000017080) ISCA1 (ENSNNAG00000017099) TUT7 (ENSNNAG00000017162) GAS1 (ENSNNAG00000017627) DAPK1 (ENSNNAG00000017637) ENSNNAG00000017651 ENSNNAG00000017653 #22 FBP2 (ENSNNAG00000017657) ENSNNAG00000017663 FBP1 (ENSNNAG00000017667) ENSNNAG00000017669 ENSNNAG00000017673 FANCC (ENSNNAG00000017684) PTCH1 (ENSNNAG00000017696) ENSNNAG00000017727 ENSNNAG00000017794 HSD17B3 (ENSNNAG00000017809) SLC35D2 (ENSNNAG00000017833) ZNF367 (ENSNNAG00000017838) HABP4 (ENSNNAG00000017841) ENSNNAG00000017844 PRXL2C (ENSNNAG00000017850) Lizard MODERN SPECIES 1 RMI1 (ENSACAG00000001474) SLC28A3 (ENSACAG00000001185) NTRK2 (ENSACAG00000000978) AGTPBP1 (ENSACAG00000022596) NAA35 (ENSACAG00000000424) GOLM1 (ENSACAG00000000371) ISCA1 (ENSACAG00000038585) TUT7 (ENSACAG00000000279) ENSACAG00000042784 ENSACAG00000014320 ENSACAG00000014306 GAS1 (ENSACAG00000014344) ENSACAG00000013200 ENSACAG00000041193 ENSACAG00000013377 ENSACAG00000013328 #22 FBP2 (ENSACAG00000038303) FBP1 (ENSACAG00000013243) ENSACAG00000036791 ENSACAG00000013209 FANCC (ENSACAG00000013146) ENSACAG00000039829 PTCH1 (ENSACAG00000012983) ENSACAG00000039786 ENSACAG00000012947 HSD17B3 (ENSACAG00000038601) SLC35D2 (ENSACAG00000037323) ZNF367 (ENSACAG00000012929) HABP4 (ENSACAG00000012890) ENSACAG00000038679 ENSACAG00000012788 Laterata ANCESTRAL SPECIES 8 ENSGT00390000008742 ENSGT00940000157487.db ENSGT00940000157487.eb ENSGT00390000002374 ENSGT00940000153434.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000154960 ENSGT00940000157674 Common wall lizard MODERN SPECIES 2 HNRNPK (ENSPMRG00000016805) RMI1 (ENSPMRG00000016801) SLC28A3 (ENSPMRG00000016799) ENSPMRG00000016796 NTRK2 (ENSPMRG00000016765) ENSPMRG00000016744 AGTPBP1 (ENSPMRG00000016696) NAA35 (ENSPMRG00000016668) GOLM1 (ENSPMRG00000016659) ENSPMRG00000016655 ENSPMRG00000016650 ENSPMRG00000016602 GAS1 (ENSPMRG00000016592) ENSPMRG00000016588 DAPK1 (ENSPMRG00000016551) ENSPMRG00000016535 #22 FBP2 (ENSPMRG00000016523) FBP1 (ENSPMRG00000016515) AOPEP (ENSPMRG00000016503) ENSPMRG00000016491 FANCC (ENSPMRG00000016475) PTCH1 (ENSPMRG00000016442) ENSPMRG00000016419 SPTLC1 (ENSPMRG00000016404) ENSPMRG00000016397 ENSPMRG00000016375 NFIL3 (ENSPMRG00000016364) AUH (ENSPMRG00000016355) SYK (ENSPMRG00000016327) DIRAS2 (ENSPMRG00000016320) ENSPMRG00000016317 Argentine black and white tegu MODERN SPECIES 25 UBQLN1 (ENSSMRG00000019171) GKAP1 (ENSSMRG00000019172) KIF27 (ENSSMRG00000019173) C9orf64 (ENSSMRG00000019175) HNRNPK (ENSSMRG00000019177) RMI1 (ENSSMRG00000019178) ENSSMRG00000019179 NTRK2 (ENSSMRG00000019181) AGTPBP1 (ENSSMRG00000019183) NAA35 (ENSSMRG00000019184) GOLM1 (ENSSMRG00000019185) ISCA1 (ENSSMRG00000019188) ENSSMRG00000019189 GAS1 (ENSSMRG00000019190) DAPK1 (ENSSMRG00000019192) ENSSMRG00000019193 #22 FBP2 (ENSSMRG00000019194) FBP1 (ENSSMRG00000019195) AOPEP (ENSSMRG00000019197) FANCC (ENSSMRG00000019201) PTCH1 (ENSSMRG00000019202) ENSSMRG00000019203 HSD17B3 (ENSSMRG00000019207) SLC35D2 (ENSSMRG00000019213) ZNF367 (ENSSMRG00000019214) HABP4 (ENSSMRG00000019215) ENSSMRG00000019216 PRXL2C (ENSSMRG00000019222) ENSSMRG00000019224 LRRC2 (ENSSMRG00000019225) CNTNAP4 (ENSSMRG00000019250) tuatara MODERN SPECIES 1143 ENSSPUG00000003302 ENSSPUG00000003319 C9orf64 (ENSSPUG00000003329) ENSSPUG00000003339 RMI1 (ENSSPUG00000003362) SLC28A3 (ENSSPUG00000003452) NTRK2 (ENSSPUG00000003797) AGTPBP1 (ENSSPUG00000003842) NAA35 (ENSSPUG00000003967) ENSSPUG00000003998 ISCA1 (ENSSPUG00000004003) ENSSPUG00000004012 TUT7 (ENSSPUG00000004029) GAS1 (ENSSPUG00000004079) DAPK1 (ENSSPUG00000004089) ENSSPUG00000004123 #22 FBP2 (ENSSPUG00000004131) FBP1 (ENSSPUG00000004145) ENSSPUG00000004161 ENSSPUG00000004172 FANCC (ENSSPUG00000004208) PTCH1 (ENSSPUG00000004239) ENSSPUG00000004336 HSD17B3 (ENSSPUG00000004509) ENSSPUG00000004523 ENSSPUG00000004528 ZNF367 (ENSSPUG00000004543) HABP4 (ENSSPUG00000004571) ENSSPUG00000004583 PRXL2C (ENSSPUG00000004606) ENSSPUG00000004632 Anura ANCESTRAL SPECIES 29 ENSGT00940000156437 ENSGT00390000008742 ENSGT01070000255930 ENSGT00940000157487 ENSGT00940000153434 ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT01100000265558 ENSGT00530000063675.b ENSGT00940000156859 ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950 ENSGT00510000048363 ENSGT00940000162302 ENSGT00940000166301 ENSGT00940000154960 Frog MODERN SPECIES hnrnpk (ENSXETG00000011722) rmi1 (ENSXETG00000011723) slc28a3 (ENSXETG00000011724) ENSXETG00000040442 ntrk2 (ENSXETG00000011726) ENSXETG00000044038 agtpbp1 (ENSXETG00000011732) naa35 (ENSXETG00000031569) ENSXETG00000048631 golm1 (ENSXETG00000020533) lrtm2 (ENSXETG00000017501) isca1 (ENSXETG00000030839) tut7 (ENSXETG00000017552) gas1 (ENSXETG00000048456) dapk1 (ENSXETG00000017571) ctsv (ENSXETG00000027581) #22 fbp2 (ENSXETG00000017586) fbp1 (ENSXETG00000038459) aopep (ENSXETG00000017591) fancc (ENSXETG00000017597) ENSXETG00000043605 ENSXETG00000044769 ptch1 (ENSXETG00000014834) ercc6l2 (ENSXETG00000014835) hsd17b3 (ENSXETG00000014837) slc35d2 (ENSXETG00000041312) abraxas1 (ENSXETG00000014838) znf367 (ENSXETG00000014840) habp4 (ENSXETG00000014841) cdc14b (ENSXETG00000014839) ENSXETG00000041439 Leishan spiny toad MODERN SPECIES ENSLLEG00000002963 ENSLLEG00000002947 ENSLLEG00000002938 ISCA1 (ENSLLEG00000002923) ENSLLEG00000002911 ENSLLEG00000002906 TUT7 (ENSLLEG00000002744) ENSLLEG00000002689 GAS1 (ENSLLEG00000002671) ENSLLEG00000002661 ENSLLEG00000002655 ENSLLEG00000002646 ENSLLEG00000002632 ENSLLEG00000002602 DAPK1 (ENSLLEG00000002535) ENSLLEG00000002495 #22 ENSLLEG00000002486 FBP2 (ENSLLEG00000002458) FBP1 (ENSLLEG00000002435) ENSLLEG00000002423 ENSLLEG00000002414 AOPEP (ENSLLEG00000002292) ENSLLEG00000002192 FANCC (ENSLLEG00000002124) ENSLLEG00000002102 PTCH1 (ENSLLEG00000001683) ENSLLEG00000001534 HSD17B3 (ENSLLEG00000001469) SLC35D2 (ENSLLEG00000001436) ZNF367 (ENSLLEG00000001419) HABP4 (ENSLLEG00000001392) Coelacanth MODERN SPECIES 484 ENSLACG00000013787 DAPK1 (ENSLACG00000012145) si:dkey-26g8.5 (ENSLACG00000011613) #22 FBP2 (ENSLACG00000010679) FBP1 (ENSLACG00000010034) ENSLACG00000022484 ENSLACG00000007837 ENSLACG00000005656 Actinopterygii ANCESTRAL SPECIES 65 ENSGT00940000154969.b ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.b ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 ENSGT00530000064292 Neopterygii ANCESTRAL SPECIES 26 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.a ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.b ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 Spotted gar MODERN SPECIES 658 lipg (ENSLOCG00000011301) kcmf1 (ENSLOCG00000011313) slc20a2 (ENSLOCG00000011322) ENSLOCG00000011330 smn1 (ENSLOCG00000011339) hspb11 (ENSLOCG00000011348) mccc2 (ENSLOCG00000011352) ENSLOCG00000011364 dab2 (ENSLOCG00000011371) c9 (ENSLOCG00000011377) TMEM8B (ENSLOCG00000011389) ENSLOCG00000011395 tars1 (ENSLOCG00000011402) gas1a (ENSLOCG00000017545) dapk1 (ENSLOCG00000011423) ctsla (ENSLOCG00000011433) #22 fbp2 (ENSLOCG00000011443) fbp1b (ENSLOCG00000011449) KANK1 (ENSLOCG00000011458) dmrt1 (ENSLOCG00000011472) dmrt3a (ENSLOCG00000011480) dmrt2a (ENSLOCG00000011487) smarca2 (ENSLOCG00000011499) adamts3 (ENSLOCG00000011512) NPFFR2 (ENSLOCG00000011523) ENSLOCG00000011536 slc4a4a (ENSLOCG00000011541) DCK (ENSLOCG00000011567) mob1bb (ENSLOCG00000011573) GRSF1 (ENSLOCG00000011589) rufy3 (ENSLOCG00000011601) Osteoglossocephalai ANCESTRAL SPECIES 8 ENSGT00940000166263 ENSGT00940000158491.a ENSGT00940000153352.A ENSGT00950000182964.a.b.b.a.a ENSGT00940000166675 ENSGT00940000155949 ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.a ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 Clupeocephala ANCESTRAL SPECIES 160 ENSGT00940000155305.b.b ENSGT00940000159721.h ENSGT00510000048902.a.f ENSGT00940000166328 ENSGT00390000014845 ENSGT00670000099470 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00940000171993 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00390000015513.a.b.b Otomorpha ANCESTRAL SPECIES 17 ENSGT00940000155305.b.b ENSGT00940000159721.h ENSGT00510000048902.a.f ENSGT00940000166328 ENSGT00390000014845 ENSGT00670000099470 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762.u ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00390000015513.a.b.b Clupeiformes ANCESTRAL SPECIES 77 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT01050000244898.b.b.e.a ENSGT00940000158529 ENSGT00940000156035 ENSGT01080000257489 Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 3 FAM163B (ENSCHAG00000023100) swi5 (ENSCHAG00000023103) slc27a4 (ENSCHAG00000023124) ptgdsa (ENSCHAG00000023462) ENSCHAG00000023480 ambp (ENSCHAG00000023520) nrarpa (ENSCHAG00000023538) ENSCHAG00000023541 cdc37l1 (ENSCHAG00000023549) ugcg (ENSCHAG00000023552) PTBP3 (ENSCHAG00000023592) hsdl2 (ENSCHAG00000023904) ENSCHAG00000023936 inip (ENSCHAG00000023941) snx30 (ENSCHAG00000023944) si:dkey-26g8.5 (ENSCHAG00000024012) #22 fbp1b (ENSCHAG00000024056) PLK2 (ENSCHAG00000024068) ENSCHAG00000024102 ENSCHAG00000024105 ENSCHAG00000024128 ENSCHAG00000024439 NAA25 (ENSCHAG00000024455) pitpnb (ENSCHAG00000024528) ENSCHAG00000024537 ENSCHAG00000024560 ENSCHAG00000024567 fut7 (ENSCHAG00000024582) fut7 (ENSCHAG00000024586) pou5f3 (ENSCHAG00000024591) npdc1a (ENSCHAG00000024599) Atlantic herring MODERN SPECIES 23 mrps36 (ENSCHAG00000026678) mier3b (ENSCHAG00000026693) plk2b (ENSCHAG00000026726) si:dkey-190g11.3 (ENSCHAG00000026738) rab3c (ENSCHAG00000026746) PDE4D (ENSCHAG00000026756) elovl7a (ENSCHAG00000026800) zcchc8 (ENSCHAG00000026801) DAB2 (ENSCHAG00000026804) TMEM8B (ENSCHAG00000026814) ENSCHAG00000026822 ENSCHAG00000026831 tars1 (ENSCHAG00000026904) gas1a (ENSCHAG00000027396) dapk1 (ENSCHAG00000027445) ctsla (ENSCHAG00000027488) #22 fbp2 (ENSCHAG00000000965) ENSCHAG00000001123 dmrt1 (ENSCHAG00000001231) dmrt3a (ENSCHAG00000001256) dmrt2a (ENSCHAG00000001301) smarca2 (ENSCHAG00000001539) adamts3 (ENSCHAG00000003933) NPFFR2 (ENSCHAG00000009148) gc (ENSCHAG00000009172) slc4a4a (ENSCHAG00000009209) mob1ba (ENSCHAG00000010808) GRSF1 (ENSCHAG00000010995) rufy3 (ENSCHAG00000011029) ENSCHAG00000012187 cxcl11.1 (ENSCHAG00000012224) Denticle herring DUPLICATION Denticle herring MODERN SPECIES 13 CERT1 (ENSDCDG00000027303) hmgcrb (ENSDCDG00000027394) GCNT4 (ENSDCDG00000028927) FAM169A (ENSDCDG00000028929) lhx5 (ENSDCDG00000028930) mzt2b (ENSDCDG00000028932) zgc:193801 (ENSDCDG00000028935) tnfrsfa (ENSDCDG00000028939) unc5da (ENSDCDG00000028972) aqp3b (ENSDCDG00000029961) ENSDCDG00000029964 ENSDCDG00000029969 dab2 (ENSDCDG00000029983) c9 (ENSDCDG00000029988) gas1b (ENSDCDG00000029994) si:dkey-26g8.5 (ENSDCDG00000000375) #22 fbp1b (ENSDCDG00000000563) PLK2 (ENSDCDG00000000583) RAB3C (ENSDCDG00000000615) PDE4D (ENSDCDG00000000665) DEPDC1B (ENSDCDG00000000749) ELOVL7 (ENSDCDG00000000756) ZSWIM6 (ENSDCDG00000000784) KIF2A (ENSDCDG00000000873) PITPNM2 (ENSDCDG00000001216) MPHOSPH9 (ENSDCDG00000001303) CDK2AP1 (ENSDCDG00000001305) sbno1 (ENSDCDG00000001375) kmt5aa (ENSDCDG00000002110) snrnp35 (ENSDCDG00000002117) HIP1R (ENSDCDG00000002182) Denticle herring MODERN SPECIES 2 rsrc2 (ENSDCDG00000002949) zcchc8 (ENSDCDG00000002992) dnaaf11 (ENSDCDG00000003033) dnaaf11 (ENSDCDG00000003084) ammecr1 (ENSDCDG00000003121) CLIP1 (ENSDCDG00000003198) DAB2 (ENSDCDG00000003235) TMEM8B (ENSDCDG00000003254) ENSDCDG00000003270 tars1 (ENSDCDG00000003540) tars1 (ENSDCDG00000005012) tars1 (ENSDCDG00000005031) tars1 (ENSDCDG00000005042) gas1a (ENSDCDG00000005053) dapk1 (ENSDCDG00000005122) ctsla (ENSDCDG00000005536) #22 fbp2 (ENSDCDG00000005540) fbp1a (ENSDCDG00000005541) f2r (ENSDCDG00000005542) iqgap2 (ENSDCDG00000007179) F2RL2 (ENSDCDG00000021673) sv2ca (ENSDCDG00000021684) ENSDCDG00000021869 ANKDD1B (ENSDCDG00000021873) POLK (ENSDCDG00000021887) arid3c (ENSDCDG00000021935) npr3 (ENSDCDG00000021941) sub1b (ENSDCDG00000021943) zfr (ENSDCDG00000021959) mtmr12 (ENSDCDG00000021992) golph3a (ENSDCDG00000022003) Otophysi ANCESTRAL SPECIES 78 ENSGT00530000067979 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491.a ENSGT00940000153352.A ENSGT00940000166675 ENSGT00940000155949 ENSGT00390000012762.v ENSGT00940000155567 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT01050000244898.b.b.e.a ENSGT00940000165677 ENSGT00940000156035 ENSGT01080000257489 Cyprinoidei ANCESTRAL SPECIES 43 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491.a ENSGT00940000159752.j ENSGT00940000153352.A ENSGT00940000166675 ENSGT00940000155949 ENSGT00390000012762.v ENSGT00940000155567 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.b ENSGT00940000156085 ENSGT01070000253744.b.b.e.a ENSGT00390000000113.B ENSGT00940000156290.a ENSGT00940000165457.b ENSGT00940000156667 ENSGT00940000154170.A ENSGT00940000164571 Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish MODERN SPECIES 3 ifit9 (ENSDARG00000008098) ifit10 (ENSDARG00000007467) ifit11 (ENSDARG00000090537) ifit12 (ENSDARG00000090977) slc16a12b (ENSDARG00000089885) pank1b (ENSDARG00000010098) zgc:174153 (ENSDARG00000079376) #22 zgc:174855 (ENSDARG00000094559) #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 ENSDARG00000095072 #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 zgc:174154 (ENSDARG00000075527) #22 MGC174155 (ENSDARG00000087651) #22 wu:fa26c03 (ENSDARG00000074306) #22 ENSDARG00000089806 #22 ENSDARG00000039173 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000100833 #22 HTR7 (ENSDARG00000099854) ENSDARG00000040110 rpp30 (ENSDARG00000027428) ankrd1b (ENSDARG00000076192) pcgf5b (ENSDARG00000052388) HECTD2 (ENSDARG00000061194) ppp1r3cb (ENSDARG00000014554) MPP3 (ENSDARG00000062667) ENSDARG00000007906 muc13b (ENSDARG00000079647) znf281b (ENSDARG00000035910) ENSDARG00000062672 ENSDARG00000102056 Zebrafish MODERN SPECIES 3 ch25h (ENSDARG00000045190) ifit9 (ENSDARG00000008098) ifit10 (ENSDARG00000007467) ifit11 (ENSDARG00000090537) ifit12 (ENSDARG00000090977) slc16a12b (ENSDARG00000089885) pank1b (ENSDARG00000010098) zgc:174153 (ENSDARG00000079376) #22 zgc:174855 (ENSDARG00000094559) #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 ENSDARG00000095072 #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 zgc:174154 (ENSDARG00000075527) #22 MGC174155 (ENSDARG00000087651) #22 wu:fa26c03 (ENSDARG00000074306) #22 ENSDARG00000089806 #22 ENSDARG00000039173 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000100833 #22 HTR7 (ENSDARG00000099854) ENSDARG00000040110 rpp30 (ENSDARG00000027428) ankrd1b (ENSDARG00000076192) pcgf5b (ENSDARG00000052388) HECTD2 (ENSDARG00000061194) ppp1r3cb (ENSDARG00000014554) MPP3 (ENSDARG00000062667) ENSDARG00000007906 muc13b (ENSDARG00000079647) znf281b (ENSDARG00000035910) ENSDARG00000062672 Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish DUPLICATION Zebrafish MODERN SPECIES 3 STAMBPL1 (ENSDARG00000003085) acta2 (ENSDARG00000045180) ch25h (ENSDARG00000045190) ifit9 (ENSDARG00000008098) ifit10 (ENSDARG00000007467) ifit11 (ENSDARG00000090537) ifit12 (ENSDARG00000090977) slc16a12b (ENSDARG00000089885) pank1b (ENSDARG00000010098) zgc:174153 (ENSDARG00000079376) #22 zgc:174855 (ENSDARG00000094559) #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 ENSDARG00000095072 #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 zgc:174154 (ENSDARG00000075527) #22 MGC174155 (ENSDARG00000087651) #22 wu:fa26c03 (ENSDARG00000074306) #22 ENSDARG00000089806 #22 ENSDARG00000039173 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000100833 #22 HTR7 (ENSDARG00000099854) ENSDARG00000040110 rpp30 (ENSDARG00000027428) ankrd1b (ENSDARG00000076192) pcgf5b (ENSDARG00000052388) HECTD2 (ENSDARG00000061194) ppp1r3cb (ENSDARG00000014554) MPP3 (ENSDARG00000062667) ENSDARG00000007906 muc13b (ENSDARG00000079647) Zebrafish MODERN SPECIES 3 acta2 (ENSDARG00000045180) ch25h (ENSDARG00000045190) ifit9 (ENSDARG00000008098) ifit10 (ENSDARG00000007467) ifit11 (ENSDARG00000090537) ifit12 (ENSDARG00000090977) slc16a12b (ENSDARG00000089885) pank1b (ENSDARG00000010098) zgc:174153 (ENSDARG00000079376) #22 zgc:174855 (ENSDARG00000094559) #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 ENSDARG00000095072 #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 zgc:174154 (ENSDARG00000075527) #22 MGC174155 (ENSDARG00000087651) #22 wu:fa26c03 (ENSDARG00000074306) #22 ENSDARG00000089806 #22 ENSDARG00000039173 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000100833 #22 HTR7 (ENSDARG00000099854) ENSDARG00000040110 rpp30 (ENSDARG00000027428) ankrd1b (ENSDARG00000076192) pcgf5b (ENSDARG00000052388) HECTD2 (ENSDARG00000061194) ppp1r3cb (ENSDARG00000014554) MPP3 (ENSDARG00000062667) ENSDARG00000007906 muc13b (ENSDARG00000079647) znf281b (ENSDARG00000035910) Zebrafish MODERN SPECIES 3 lipf (ENSDARG00000018529) ankrd22 (ENSDARG00000002298) STAMBPL1 (ENSDARG00000003085) acta2 (ENSDARG00000045180) ch25h (ENSDARG00000045190) ifit9 (ENSDARG00000008098) ifit10 (ENSDARG00000007467) ifit11 (ENSDARG00000090537) ifit12 (ENSDARG00000090977) slc16a12b (ENSDARG00000089885) pank1b (ENSDARG00000010098) zgc:174153 (ENSDARG00000079376) #22 zgc:174855 (ENSDARG00000094559) #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 ENSDARG00000095072 #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 zgc:174154 (ENSDARG00000075527) #22 MGC174155 (ENSDARG00000087651) #22 wu:fa26c03 (ENSDARG00000074306) #22 ENSDARG00000089806 #22 ENSDARG00000039173 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000100833 #22 HTR7 (ENSDARG00000099854) ENSDARG00000040110 rpp30 (ENSDARG00000027428) ankrd1b (ENSDARG00000076192) pcgf5b (ENSDARG00000052388) HECTD2 (ENSDARG00000061194) ppp1r3cb (ENSDARG00000014554) MPP3 (ENSDARG00000062667) Zebrafish DUPLICATION Zebrafish MODERN SPECIES 3 rnls (ENSDARG00000012453) lipf (ENSDARG00000018529) ankrd22 (ENSDARG00000002298) STAMBPL1 (ENSDARG00000003085) acta2 (ENSDARG00000045180) ch25h (ENSDARG00000045190) ifit9 (ENSDARG00000008098) ifit10 (ENSDARG00000007467) ifit11 (ENSDARG00000090537) ifit12 (ENSDARG00000090977) slc16a12b (ENSDARG00000089885) pank1b (ENSDARG00000010098) zgc:174153 (ENSDARG00000079376) #22 zgc:174855 (ENSDARG00000094559) #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 ENSDARG00000095072 #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 zgc:174154 (ENSDARG00000075527) #22 MGC174155 (ENSDARG00000087651) #22 wu:fa26c03 (ENSDARG00000074306) #22 ENSDARG00000089806 #22 ENSDARG00000039173 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000100833 #22 HTR7 (ENSDARG00000099854) ENSDARG00000040110 rpp30 (ENSDARG00000027428) ankrd1b (ENSDARG00000076192) pcgf5b (ENSDARG00000052388) HECTD2 (ENSDARG00000061194) ppp1r3cb (ENSDARG00000014554) Zebrafish MODERN SPECIES 3 ptenb (ENSDARG00000056623) rnls (ENSDARG00000012453) lipf (ENSDARG00000018529) ankrd22 (ENSDARG00000002298) STAMBPL1 (ENSDARG00000003085) acta2 (ENSDARG00000045180) ch25h (ENSDARG00000045190) ifit9 (ENSDARG00000008098) ifit10 (ENSDARG00000007467) ifit11 (ENSDARG00000090537) ifit12 (ENSDARG00000090977) slc16a12b (ENSDARG00000089885) pank1b (ENSDARG00000010098) zgc:174153 (ENSDARG00000079376) #22 zgc:174855 (ENSDARG00000094559) #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 ENSDARG00000095072 #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 zgc:174154 (ENSDARG00000075527) #22 MGC174155 (ENSDARG00000087651) #22 wu:fa26c03 (ENSDARG00000074306) #22 ENSDARG00000089806 #22 ENSDARG00000039173 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000100833 #22 HTR7 (ENSDARG00000099854) ENSDARG00000040110 rpp30 (ENSDARG00000027428) ankrd1b (ENSDARG00000076192) pcgf5b (ENSDARG00000052388) HECTD2 (ENSDARG00000061194) Zebrafish MODERN SPECIES 3 ankrd1b (ENSDARG00000076192) rpp30 (ENSDARG00000027428) ENSDARG00000040110 HTR7 (ENSDARG00000099854) ENSDARG00000100833 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000039173 #22 ENSDARG00000089806 #22 wu:fa26c03 (ENSDARG00000074306) #22 MGC174155 (ENSDARG00000087651) #22 zgc:174154 (ENSDARG00000075527) #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 ENSDARG00000095072 #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 zgc:174855 (ENSDARG00000094559) #22 zgc:174153 (ENSDARG00000079376) #22 pank1b (ENSDARG00000010098) slc16a12b (ENSDARG00000089885) ifit12 (ENSDARG00000090977) ifit11 (ENSDARG00000090537) ifit10 (ENSDARG00000007467) ifit9 (ENSDARG00000008098) ch25h (ENSDARG00000045190) acta2 (ENSDARG00000045180) STAMBPL1 (ENSDARG00000003085) ankrd22 (ENSDARG00000002298) lipf (ENSDARG00000018529) rnls (ENSDARG00000012453) ptenb (ENSDARG00000056623) atad1b (ENSDARG00000056609) papss2b (ENSDARG00000056600) Zebrafish MODERN SPECIES 3 ifit11 (ENSDARG00000090537) ifit12 (ENSDARG00000090977) slc16a12b (ENSDARG00000089885) pank1b (ENSDARG00000010098) zgc:174153 (ENSDARG00000079376) #22 zgc:174855 (ENSDARG00000094559) #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 ENSDARG00000095072 #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 zgc:174154 (ENSDARG00000075527) #22 MGC174155 (ENSDARG00000087651) #22 wu:fa26c03 (ENSDARG00000074306) #22 ENSDARG00000089806 #22 ENSDARG00000039173 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000100833 #22 HTR7 (ENSDARG00000099854) ENSDARG00000040110 rpp30 (ENSDARG00000027428) ankrd1b (ENSDARG00000076192) pcgf5b (ENSDARG00000052388) HECTD2 (ENSDARG00000061194) ppp1r3cb (ENSDARG00000014554) MPP3 (ENSDARG00000062667) ENSDARG00000007906 muc13b (ENSDARG00000079647) znf281b (ENSDARG00000035910) ENSDARG00000062672 ENSDARG00000102056 nmt1b (ENSDARG00000057206) PLCD3 (ENSDARG00000079572) Zebrafish MODERN SPECIES 3 ifit10 (ENSDARG00000007467) ifit11 (ENSDARG00000090537) ifit12 (ENSDARG00000090977) slc16a12b (ENSDARG00000089885) pank1b (ENSDARG00000010098) zgc:174153 (ENSDARG00000079376) #22 zgc:174855 (ENSDARG00000094559) #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 ENSDARG00000095072 #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 zgc:174154 (ENSDARG00000075527) #22 MGC174155 (ENSDARG00000087651) #22 wu:fa26c03 (ENSDARG00000074306) #22 ENSDARG00000089806 #22 ENSDARG00000039173 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000100833 #22 HTR7 (ENSDARG00000099854) ENSDARG00000040110 rpp30 (ENSDARG00000027428) ankrd1b (ENSDARG00000076192) pcgf5b (ENSDARG00000052388) HECTD2 (ENSDARG00000061194) ppp1r3cb (ENSDARG00000014554) MPP3 (ENSDARG00000062667) ENSDARG00000007906 muc13b (ENSDARG00000079647) znf281b (ENSDARG00000035910) ENSDARG00000062672 ENSDARG00000102056 nmt1b (ENSDARG00000057206) Zebrafish DUPLICATION Zebrafish MODERN SPECIES 3 ankrd22 (ENSDARG00000002298) STAMBPL1 (ENSDARG00000003085) acta2 (ENSDARG00000045180) ch25h (ENSDARG00000045190) ifit9 (ENSDARG00000008098) ifit10 (ENSDARG00000007467) ifit11 (ENSDARG00000090537) ifit12 (ENSDARG00000090977) slc16a12b (ENSDARG00000089885) pank1b (ENSDARG00000010098) zgc:174153 (ENSDARG00000079376) #22 zgc:174855 (ENSDARG00000094559) #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 ENSDARG00000095072 #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 zgc:174154 (ENSDARG00000075527) #22 MGC174155 (ENSDARG00000087651) #22 wu:fa26c03 (ENSDARG00000074306) #22 ENSDARG00000089806 #22 ENSDARG00000039173 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000100833 #22 HTR7 (ENSDARG00000099854) ENSDARG00000040110 rpp30 (ENSDARG00000027428) ankrd1b (ENSDARG00000076192) pcgf5b (ENSDARG00000052388) HECTD2 (ENSDARG00000061194) ppp1r3cb (ENSDARG00000014554) MPP3 (ENSDARG00000062667) ENSDARG00000007906 Zebrafish MODERN SPECIES 3 atad1b (ENSDARG00000056609) ptenb (ENSDARG00000056623) rnls (ENSDARG00000012453) lipf (ENSDARG00000018529) ankrd22 (ENSDARG00000002298) STAMBPL1 (ENSDARG00000003085) acta2 (ENSDARG00000045180) ch25h (ENSDARG00000045190) ifit9 (ENSDARG00000008098) ifit10 (ENSDARG00000007467) ifit11 (ENSDARG00000090537) ifit12 (ENSDARG00000090977) slc16a12b (ENSDARG00000089885) pank1b (ENSDARG00000010098) zgc:174153 (ENSDARG00000079376) #22 zgc:174855 (ENSDARG00000094559) #22 si:dkey-26g8.5 (ENSDARG00000089750) #22 ENSDARG00000095072 #22 si:dkey-269i1.4 (ENSDARG00000095744) #22 zgc:174154 (ENSDARG00000075527) #22 MGC174155 (ENSDARG00000087651) #22 wu:fa26c03 (ENSDARG00000074306) #22 ENSDARG00000089806 #22 ENSDARG00000039173 #22 si:dkey-239j18.2 (ENSDARG00000095254) #22 ENSDARG00000100833 #22 HTR7 (ENSDARG00000099854) ENSDARG00000040110 rpp30 (ENSDARG00000027428) ankrd1b (ENSDARG00000076192) pcgf5b (ENSDARG00000052388) Zebrafish MODERN SPECIES 20 ENSDARG00000092931 capga (ENSDARG00000035560) si:ch211-114c12.2 (ENSDARG00000028542) mrps31 (ENSDARG00000057855) slc25a15b (ENSDARG00000062271) tm4sf21a (ENSDARG00000057706) mpdu1a (ENSDARG00000035562) sox19a (ENSDARG00000010770) eif4a1b (ENSDARG00000003032) senp3a (ENSDARG00000095538) plscr3a (ENSDARG00000093078) phf23a (ENSDARG00000030887) atp6v1aa (ENSDARG00000034534) ENSDARG00000094537 zdhhc23a (ENSDARG00000029039) ctsll (ENSDARG00000011701) #22 znf703 (ENSDARG00000035563) tia1l (ENSDARG00000026476) dgcr8 (ENSDARG00000035564) trmt2a (ENSDARG00000002830) atp6v0a2b (ENSDARG00000035565) osbp2b (ENSDARG00000022772) rasl10a (ENSDARG00000062314) ap1b1 (ENSDARG00000020621) ENSDARG00000078803 ewsr1b (ENSDARG00000020465) rhbdd3 (ENSDARG00000079816) ENSDARG00000076119 gbgt1l5 (ENSDARG00000019207) PNPLA7 (ENSDARG00000040002) mrpl41 (ENSDARG00000002264) Zebrafish MODERN SPECIES 20 ENSDARG00000032482 rtkna (ENSDARG00000031345) nos2a (ENSDARG00000026925) smn1 (ENSDARG00000018494) hspb11 (ENSDARG00000067777) mccc2 (ENSDARG00000017571) ENSDARG00000102375 DAB2 (ENSDARG00000053091) zgc:112966 (ENSDARG00000095369) TMEM8B (ENSDARG00000075126) ENSDARG00000094625 ENSDARG00000094268 tars1 (ENSDARG00000013250) gas1a (ENSDARG00000077298) dapk1 (ENSDARG00000060093) ctsla (ENSDARG00000007836) #22 fbp2 (ENSDARG00000012366) fbp1a (ENSDARG00000021366) ENSDARG00000060102 dmrt1 (ENSDARG00000007349) dmrt3a (ENSDARG00000035290) dmrt2a (ENSDARG00000015072) smarca2 (ENSDARG00000008904) adamts3 (ENSDARG00000060127) NPFFR2 (ENSDARG00000033635) gc (ENSDARG00000089310) slc4a4a (ENSDARG00000013730) ifngr2 (ENSDARG00000067795) POLK (ENSDARG00000059963) ANKDD1B (ENSDARG00000025866) ENSDARG00000059982 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 690 ENSGT00940000156309.B.g.a ENSGT00940000165351.j.d.b ENSGT00530000063882.b.gb.a ENSGT00550000074787.c.b.c ENSGT00940000156558.a.b.f ENSGT00940000153321.b.b.u.a #22 ENSGT00390000014618.b.d.a ENSGT00940000154962.B.p.b ENSGT00390000015977.d ENSGT00530000063723.a.b ENSGT00900000143393 ENSGT00950000182881.a.b.a.a.a.b ENSGT00940000157987.g.a Cyprininae_a ANCESTRAL SPECIES 42 ENSGT00940000163587.a.b.b.e.a.b ENSGT00940000159305.cb.b ENSGT00410000026585.c ENSGT00390000010017.p ENSGT00730000110966.a.b.d.b ENSGT01030000234590.B.a.a.e.a.d ENSGT00940000153916.A.a.a ENSGT00940000165992.a.b.b ENSGT00940000153783.b.a.a.b.c ENSGT00940000156309.B.g.a ENSGT00940000165351.j.d.a ENSGT00530000063882.b.gb.a ENSGT00550000074787.c.b.c ENSGT01030000235354.b ENSGT00940000156558.a.b.f ENSGT00940000153321.b.b.u.a #22 ENSGT00390000014618.b.d.a ENSGT00940000154962.B.p.b ENSGT00390000015977.d ENSGT00530000063723.a.b ENSGT00950000182881.a.b.a.a.a.b ENSGT00940000157987.g.a ENSGT00940000165465.e ENSGT00940000155991.ab ENSGT00940000154849.b.e ENSGT00940000154191.k.a.a ENSGT00390000013711.f ENSGT00940000164061.d.b ENSGT00940000156763.b.b.a ENSGT00390000013158 ENSGT00940000167223 Golden-line barbel MODERN SPECIES 274 tp53 (ENSSGRG00000030904) ENSSGRG00000030903 capga (ENSSGRG00000030898) si:ch211-114c12.2 (ENSSGRG00000030897) mrps31 (ENSSGRG00000030896) slc25a15b (ENSSGRG00000030895) tm4sf21a (ENSSGRG00000030894) mpdu1a (ENSSGRG00000030885) sox19a (ENSSGRG00000030881) senp3a (ENSSGRG00000030408) plscr3a (ENSSGRG00000030402) phf23a (ENSSGRG00000030397) atp6v1aa (ENSSGRG00000029911) ENSSGRG00000029900 zdhhc23a (ENSSGRG00000029899) ENSSGRG00000029745 #22 znf703 (ENSSGRG00000029744) tia1l (ENSSGRG00000029743) dgcr8 (ENSSGRG00000029651) trmt2a (ENSSGRG00000029340) atp6v0a2b (ENSSGRG00000028648) osbp2b (ENSSGRG00000028622) rasl10a (ENSSGRG00000028619) ap1b1 (ENSSGRG00000025201) ENSSGRG00000025121 ENSSGRG00000025120 rhbdd3 (ENSSGRG00000025119) ENSSGRG00000024989 mrpl41 (ENSSGRG00000024979) ENSSGRG00000024978 ENSSGRG00000024977 Common carp reference MODERN SPECIES 15 gps2 (ENSCCRG00000015767) tp53 (ENSCCRG00000031304) capga (ENSCCRG00000031314) si:ch211-114c12.2 (ENSCCRG00000001229) mrps31 (ENSCCRG00000034729) tm4sf21a (ENSCCRG00000008770) slc25a15b (ENSCCRG00000061865) mpdu1a (ENSCCRG00000001247) sox19a (ENSCCRG00000055009) eif4a1b (ENSCCRG00000063140) senp3a (ENSCCRG00000001271) phf23a (ENSCCRG00000001364) atp6v1aa (ENSCCRG00000056788) ENSCCRG00000034726 zdhhc23a (ENSCCRG00000039586) ENSCCRG00000039589 #22 znf703 (ENSCCRG00000039593) ENSCCRG00000065721 tia1l (ENSCCRG00000059385) dgcr8 (ENSCCRG00000009041) trmt2a (ENSCCRG00000009024) atp6v0a2b (ENSCCRG00000008893) osbp2b (ENSCCRG00000013906) rasl10a (ENSCCRG00000067949) ap1b1 (ENSCCRG00000036625) ENSCCRG00000056553 ENSCCRG00000060787 rhbdd3 (ENSCCRG00000012647) ENSCCRG00000080981 ENSCCRG00000036150 dph7 (ENSCCRG00000082374) Goldfish MODERN SPECIES 23 trpv4 (ENSCARG00000024671) fam222aa (ENSCARG00000030460) mvk (ENSCARG00000030469) ube3b (ENSCARG00000030545) kctd10 (ENSCARG00000030651) foxn4 (ENSCARG00000031153) RUSC2 (ENSCARG00000036584) ENSCARG00000036664 ENSCARG00000036690 EIF4A1 (ENSCARG00000036703) senp3a (ENSCARG00000036735) plscr3a (ENSCARG00000036971) phf23a (ENSCARG00000036987) atp6v1aa (ENSCARG00000037026) zdhhc23a (ENSCARG00000037327) ENSCARG00000037347 #22 znf703 (ENSCARG00000037387) tia1l (ENSCARG00000037415) dgcr8 (ENSCARG00000037754) trmt2a (ENSCARG00000039562) ENSCARG00000040287 atp6v0a2b (ENSCARG00000040332) osbp2b (ENSCARG00000040672) camk2b1 (ENSCARG00000040764) si:dkey-174n20.1 (ENSCARG00000040853) ENSCARG00000040882 ranbp1 (ENSCARG00000040895) golga3 (ENSCARG00000041123) ankle2 (ENSCARG00000042941) pgam5 (ENSCARG00000043637) bri3bp (ENSCARG00000043647) Cyprininae ANCESTRAL SPECIES 31 ENSGT00940000163587.a.b.b.e.a.a ENSGT00940000159305.cb.a ENSGT00410000026585.d ENSGT00390000010017.o ENSGT00730000110966.a.b.d.a ENSGT01030000234590.B.a.a.e.a.c ENSGT00940000153916.A.a.b ENSGT00940000165992.a.b.a ENSGT00940000153783.b.a.a.b.d ENSGT00940000156309.B.g.b ENSGT00940000165351.j.d.a ENSGT00530000063882.b.gb.b ENSGT00550000074787.c.b.d ENSGT01030000235354.a.a ENSGT00940000156558.a.b.e ENSGT00940000153321.b.b.u.b #22 ENSGT00390000014618.b.d.b ENSGT00940000154962.B.p.a ENSGT00390000015977.c ENSGT00530000063723.a.a ENSGT00950000182881.a.b.a.a.a.a ENSGT00940000157987.g.b ENSGT00940000165465.f ENSGT00940000155991.`b ENSGT00940000154849.b.f ENSGT00940000154191.k.a.b ENSGT00390000013711 ENSGT00940000161716.lc ENSGT00390000018644.a ENSGT00390000000543.d ENSGT00940000158560.d Cyprininae_a ANCESTRAL SPECIES ENSGT00940000163587.a.b.b.e.a.a ENSGT00940000159305.cb.a ENSGT00410000026585.d ENSGT00390000010017.o ENSGT00730000110966.a.b.d.a ENSGT01030000234590.B.a.a.e.a.c ENSGT00940000153916.A.a.b ENSGT00940000165992.a.b.a ENSGT00940000153783.b.a.a.b.d ENSGT00940000156309.B.g.b ENSGT00940000165351.j.d.b ENSGT00530000063882.b.gb.b ENSGT00550000074787.c.b.d ENSGT01030000235354.a.a ENSGT00940000156558.a.b.e ENSGT00940000153321.b.b.u.b #22 ENSGT00390000014618.b.d.b ENSGT00940000154962.B.p.a ENSGT00390000015977.c ENSGT00530000063723.a.a ENSGT00950000182881.a.b.a.a.a.a ENSGT00940000157987.g.b ENSGT00940000165465.f ENSGT00940000155991.`b ENSGT00940000154849.b.f ENSGT00940000154191.k.a.b ENSGT00390000013711.e ENSGT00940000161716.lc ENSGT00390000018644.a ENSGT00390000000543.d ENSGT00940000158560.d Golden-line barbel MODERN SPECIES 151 gps2 (ENSSGRG00000037649) tp53 (ENSSGRG00000037660) ENSSGRG00000037691 capga (ENSSGRG00000037692) si:ch211-114c12.2 (ENSSGRG00000037693) mrps31 (ENSSGRG00000037694) ENSSGRG00000037695 tm4sf21a (ENSSGRG00000037696) mpdu1a (ENSSGRG00000037703) sox19a (ENSSGRG00000037733) senp3a (ENSSGRG00000037764) plscr3a (ENSSGRG00000040072) phf23a (ENSSGRG00000040074) atp6v1aa (ENSSGRG00000040076) zdhhc23a (ENSSGRG00000040162) ENSSGRG00000040171 #22 znf703 (ENSSGRG00000040385) tia1l (ENSSGRG00000040387) dgcr8 (ENSSGRG00000040400) trmt2a (ENSSGRG00000040867) atp6v0a2b (ENSSGRG00000041104) osbp2b (ENSSGRG00000041490) rasl10a (ENSSGRG00000041497) ENSSGRG00000041498 ap1b1 (ENSSGRG00000041503) GAS2L1 (ENSSGRG00000041813) ENSSGRG00000041823 rhbdd3 (ENSSGRG00000041825) ENSSGRG00000041827 ENSSGRG00000041828 mrpl41 (ENSSGRG00000041829) Common carp reference MODERN SPECIES 7 gps2 (ENSCCRG00000076263) tp53 (ENSCCRG00000001205) ENSCCRG00000074202 capga (ENSCCRG00000001210) si:ch211-114c12.2 (ENSCCRG00000001213) mrps31 (ENSCCRG00000001215) slc25a15b (ENSCCRG00000008772) tm4sf21a (ENSCCRG00000068539) sox19a (ENSCCRG00000008769) eif4a1b (ENSCCRG00000008761) senp3a (ENSCCRG00000008757) phf23a (ENSCCRG00000081493) atp6v1aa (ENSCCRG00000060472) ENSCCRG00000080109 zdhhc23a (ENSCCRG00000009811) ENSCCRG00000071309 #22 znf703 (ENSCCRG00000009800) tia1l (ENSCCRG00000012652) dgcr8 (ENSCCRG00000012675) trmt2a (ENSCCRG00000012772) atp6v0a2b (ENSCCRG00000012790) osbp2b (ENSCCRG00000008847) rasl10a (ENSCCRG00000068925) ap1b1 (ENSCCRG00000012488) ENSCCRG00000069207 ENSCCRG00000012414 rhbdd3 (ENSCCRG00000009817) ENSCCRG00000012403 mrpl41 (ENSCCRG00000052823) dph7 (ENSCCRG00000029784) paxx (ENSCCRG00000077878) Goldfish MODERN SPECIES 3271 tp53 (ENSCARG00000068521) ENSCARG00000068479 capga (ENSCARG00000068454) si:ch211-114c12.2 (ENSCARG00000068445) mrps31 (ENSCARG00000068429) slc25a15b (ENSCARG00000068423) tm4sf21a (ENSCARG00000068415) sox19a (ENSCARG00000068402) eif4a1b (ENSCARG00000068329) senp3a (ENSCARG00000068290) plscr3a (ENSCARG00000068269) phf23a (ENSCARG00000068254) atp6v1aa (ENSCARG00000068168) ENSCARG00000068163 zdhhc23a (ENSCARG00000068157) ENSCARG00000068134 #22 znf703 (ENSCARG00000068123) tia1l (ENSCARG00000068055) dgcr8 (ENSCARG00000067742) trmt2a (ENSCARG00000067330) atp6v0a2b (ENSCARG00000065961) osbp2b (ENSCARG00000065753) rasl10a (ENSCARG00000065721) ap1b1 (ENSCARG00000065592) ENSCARG00000065571 ENSCARG00000065558 ENSCARG00000065531 dph7 (ENSCARG00000065494) ENSCARG00000065472 ABCA2 (ENSCARG00000065214) carnmt1 (ENSCARG00000065129) Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000157242.a.a.j ENSGT00530000067979.c ENSGT00940000166272.b ENSGT00940000164944.e ENSGT00940000166263.g.a ENSGT00940000158491.a.c ENSGT00940000159752.j ENSGT00940000155949.e ENSGT00390000012762.v.a ENSGT00940000155567.x.a ENSGT00940000157861.m.b ENSGT00940000161883 ENSGT00940000154969.b.d ENSGT00390000001195.a.a.e ENSGT00940000153424.a.b.c ENSGT00940000153321.b.b.v.a #22 ENSGT00390000015513.a.a.b.b ENSGT00390000015513.a.b.a.c ENSGT00940000154886.a.a.e.a ENSGT00940000156489.b ENSGT00940000160420.f ENSGT00940000156282.a.a.b ENSGT00940000154821.b.fb ENSGT00940000156085.s ENSGT01070000253744.b.b.e.a.a.a ENSGT00390000000113.B.h ENSGT00940000156290.a.a ENSGT00940000165457.b.a ENSGT00940000156667.k ENSGT00940000164571.a ENSGT00950000182940.b.b.e.b Cyprininae_a ANCESTRAL SPECIES ENSGT01050000244898.b.b.e.a.a ENSGT00940000157242.a.a.j ENSGT00940000166272.b ENSGT00940000164944.e ENSGT00940000166263.g.a ENSGT00940000158491.a.c ENSGT00940000159752.j ENSGT00940000155949.e ENSGT00390000012762.v.a ENSGT00940000155567.x.a ENSGT00940000157861.m.b ENSGT00940000161883 ENSGT00940000154969.b.d ENSGT00390000001195.a.a.e ENSGT00940000153424.a.b.c ENSGT00940000153321.b.b.v.a #22 ENSGT00390000015513.a.a.b.b ENSGT00390000015513.a.b.a.c ENSGT00940000154886.a.a.e.a ENSGT00940000156489.b ENSGT00940000160420.f ENSGT00940000156282.a.a.b ENSGT00940000154821.b.fb ENSGT00940000156085.s ENSGT01070000253744.b.b.e.a.a.a ENSGT00390000000113.B.h ENSGT00940000156290.a.a ENSGT00940000165457.b.a ENSGT00940000156667.k ENSGT00940000164571.a ENSGT00950000182940.b.b.e.b Common carp reference MODERN SPECIES 7 wdr54 (ENSCCRG00000027837) rhobtb4 (ENSCCRG00000040255) ENSCCRG00000012985 rtkna (ENSCCRG00000012908) nos2a (ENSCCRG00000014953) smn1 (ENSCCRG00000014963) mccc2 (ENSCCRG00000041962) ENSCCRG00000062359 ENSCCRG00000015125 ENSCCRG00000070219 ENSCCRG00000025270 ENSCCRG00000051782 tars1 (ENSCCRG00000024983) gas1a (ENSCCRG00000071957) dapk1 (ENSCCRG00000037031) ctsla (ENSCCRG00000065835) #22 fbp2 (ENSCCRG00000039499) fbp1a (ENSCCRG00000061213) ENSCCRG00000032839 dmrt1 (ENSCCRG00000032706) dmrt3a (ENSCCRG00000032698) dmrt2a (ENSCCRG00000032696) smarca2 (ENSCCRG00000032681) ENSCCRG00000078663 adamts3 (ENSCCRG00000072701) NPFFR2 (ENSCCRG00000075865) gc (ENSCCRG00000028390) slc4a4a (ENSCCRG00000028529) ifngr2 (ENSCCRG00000044672) POLK (ENSCCRG00000065827) ENSCCRG00000044683 Golden-line barbel MODERN SPECIES 627 tars1 (ENSSGRG00000049559) gas1a (ENSSGRG00000049744) dapk1 (ENSSGRG00000049748) ctsla (ENSSGRG00000050025) #22 fbp2 (ENSSGRG00000050030) fbp1a (ENSSGRG00000050063) ENSSGRG00000050080 dmrt1 (ENSSGRG00000050083) dmrt2a (ENSSGRG00000050091) smarca2 (ENSSGRG00000050098) adamts3 (ENSSGRG00000050500) Goldfish MODERN SPECIES 44 ENSCARG00000022843 wdr54 (ENSCARG00000022862) rhobtb4 (ENSCARG00000022905) rtkna (ENSCARG00000023102) nos2a (ENSCARG00000023214) mccc2 (ENSCARG00000023848) ENSCARG00000024204 ENSCARG00000024217 DAB2 (ENSCARG00000024223) TMEM8B (ENSCARG00000024233) ENSCARG00000024282 tars1 (ENSCARG00000024520) gas1a (ENSCARG00000030222) ENSCARG00000030229 dapk1 (ENSCARG00000030276) ctsla (ENSCARG00000030758) #22 fbp2 (ENSCARG00000030776) fbp1a (ENSCARG00000030809) ENSCARG00000030842 dmrt1 (ENSCARG00000031029) dmrt3a (ENSCARG00000031347) dmrt2a (ENSCARG00000031374) smarca2 (ENSCARG00000031497) ENSCARG00000032107 adamts3 (ENSCARG00000032241) NPFFR2 (ENSCARG00000036313) ENSCARG00000036330 cox7c (ENSCARG00000036332) RASA1 (ENSCARG00000036380) ccnh (ENSCARG00000036775) tmem161b (ENSCARG00000036839) Cyprininae ANCESTRAL SPECIES 53 ENSGT00940000157242.a.a.i ENSGT00530000067979.d ENSGT00940000166272.a ENSGT00940000164944.f ENSGT00940000166263.g.b ENSGT00940000158491.a.d ENSGT00940000153352.A ENSGT00940000166675 ENSGT00940000155949.f ENSGT00390000012762.v.b ENSGT00940000155567.x.b ENSGT00940000157861.m.a ENSGT00940000154969.b.c ENSGT00390000001195.a.a.f ENSGT00940000153424.a.b.d ENSGT00940000153321.b.b.v.b #22 ENSGT00390000015513.a.a.b.a ENSGT00390000015513.a.b.a.d ENSGT00940000154886.a.a.e.b ENSGT00940000156489.a ENSGT00940000160420.e ENSGT00940000156282.a.a.a ENSGT00940000154821.b.gb ENSGT00940000156085.t ENSGT01070000253744.b.b.e.a.a.b ENSGT00390000000113.B.g ENSGT00940000156290.a.b ENSGT00940000165457.b.b ENSGT00940000156667.l ENSGT00940000154170.A ENSGT00940000164571.b Goldfish MODERN SPECIES 23 aqp3a (ENSCARG00000007992) ENSCARG00000008005 wdr54 (ENSCARG00000008008) rhobtb4 (ENSCARG00000008033) ENSCARG00000008119 rtkna (ENSCARG00000008184) smn1 (ENSCARG00000009135) hspb11 (ENSCARG00000009149) mccc2 (ENSCARG00000009178) ENSCARG00000009493 DAB2 (ENSCARG00000009548) TMEM8B (ENSCARG00000009588) tars1 (ENSCARG00000009832) gas1a (ENSCARG00000014625) dapk1 (ENSCARG00000014658) ctsla (ENSCARG00000014920) #22 fbp2 (ENSCARG00000014970) fbp1a (ENSCARG00000014995) ENSCARG00000015018 dmrt1 (ENSCARG00000015111) dmrt3a (ENSCARG00000015270) dmrt2a (ENSCARG00000015272) smarca2 (ENSCARG00000015308) adamts3 (ENSCARG00000015706) NPFFR2 (ENSCARG00000018894) ENSCARG00000018903 ENSCARG00000018907 slc4a4a (ENSCARG00000019161) ifngr2 (ENSCARG00000025619) POLK (ENSCARG00000025641) ANKDD1B (ENSCARG00000025684) Cyprininae_a ANCESTRAL SPECIES 151 ENSGT00530000067979.d ENSGT00940000166272.a ENSGT00940000164944.f ENSGT00940000166263.g.b ENSGT00940000158491.a.d ENSGT00940000153352.A.g ENSGT00940000153352.A.h ENSGT00940000166675 ENSGT00940000155949.f ENSGT00940000171993 ENSGT00940000155567.x.b ENSGT00940000157861.m.a ENSGT00940000154969.b.c ENSGT00390000001195.a.a.f ENSGT00940000153424.a.b.d ENSGT00940000153321.b.b.v.b #22 ENSGT00390000015513.a.a.b.a ENSGT00390000015513.a.b.a.d ENSGT00940000154886.a.a.e.b ENSGT00940000156489.a ENSGT00940000160420.e ENSGT00940000156282.a.a.a ENSGT00940000154821.b.gb ENSGT00940000156085.t ENSGT01070000253744.b.b.e.a.a.b ENSGT00390000000113.B.g ENSGT00940000156290.a.b ENSGT00940000156667.l ENSGT00940000164571.b ENSGT00950000182940.b.b.e.a ENSGT01050000244840.A.b.b.a.a Common carp reference MODERN SPECIES 15 aqp3a (ENSCCRG00000025325) ENSCCRG00000006563 ENSCCRG00000081114 wdr54 (ENSCCRG00000066225) rhobtb4 (ENSCCRG00000027808) ENSCCRG00000012891 rtkna (ENSCCRG00000027786) smn1 (ENSCCRG00000041959) hspb11 (ENSCCRG00000041954) mccc2 (ENSCCRG00000014989) ENSCCRG00000059851 ENSCCRG00000055634 ENSCCRG00000042761 tars1 (ENSCCRG00000033752) dapk1 (ENSCCRG00000015435) ctsla (ENSCCRG00000058422) #22 fbp2 (ENSCCRG00000073989) fbp1a (ENSCCRG00000080555) ENSCCRG00000039510 dmrt1 (ENSCCRG00000039591) dmrt3a (ENSCCRG00000048607) dmrt2a (ENSCCRG00000061986) smarca2 (ENSCCRG00000055138) adamts3 (ENSCCRG00000052924) NPFFR2 (ENSCCRG00000028360) gc (ENSCCRG00000001110) slc4a4a (ENSCCRG00000009148) ENSCCRG00000060599 POLK (ENSCCRG00000041529) ENSCCRG00000041503 sv2ca (ENSCCRG00000041429) Golden-line barbel MODERN SPECIES 610 tars1 (ENSSGRG00000007533) gas1a (ENSSGRG00000007537) dapk1 (ENSSGRG00000007542) ctsla (ENSSGRG00000007603) #22 fbp2 (ENSSGRG00000007997) fbp1a (ENSSGRG00000008083) ENSSGRG00000008259 dmrt1 (ENSSGRG00000008262) dmrt3a (ENSSGRG00000008270) dmrt2a (ENSSGRG00000008275) smarca2 (ENSSGRG00000008436) adamts3 (ENSSGRG00000015665) Characiphysae ANCESTRAL SPECIES 36 ENSGT00940000156667 ENSGT00940000157242.a.a ENSGT00530000067979 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491.a ENSGT00940000153352.A ENSGT00940000166675 ENSGT00940000155949 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT01050000244898.b.b.e.a ENSGT00940000165677 ENSGT00940000156035 ENSGT01080000257489 Channel catfish MODERN SPECIES 14 ENSIPUG00000012892 wdr54 (ENSIPUG00000012842) rhobtb4 (ENSIPUG00000012733) ENSIPUG00000012707 rtkn (ENSIPUG00000012641) smn1 (ENSIPUG00000012580) hspb11 (ENSIPUG00000012526) Mccc2 (ENSIPUG00000012419) ENSIPUG00000012377 dab2 (ENSIPUG00000012221) tmem8b (ENSIPUG00000012178) ggt6 (ENSIPUG00000012153) tars1 (ENSIPUG00000012104) Gas1 (ENSIPUG00000012093) dapk1 (ENSIPUG00000011874) ctsla (ENSIPUG00000011719) #22 fbp2 (ENSIPUG00000011685) fbp1a (ENSIPUG00000011530) kank1 (ENSIPUG00000011334) dmrt1 (ENSIPUG00000011312) dmrt3 (ENSIPUG00000011306) dmrt2a (ENSIPUG00000011295) smarca2 (ENSIPUG00000011060) adamts3 (ENSIPUG00000010920) npffr2 (ENSIPUG00000010900) gc (ENSIPUG00000010871) SLC4A4 (ENSIPUG00000010635) mob1ba (ENSIPUG00000010553) grsf1 (ENSIPUG00000010533) rufy3 (ENSIPUG00000010389) CXCL11.3 (ENSIPUG00000010185) Characiphysae_b ANCESTRAL SPECIES 9 ENSGT00940000157242.a.a ENSGT00530000067979 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491.a ENSGT00940000153352.A ENSGT00940000166675 ENSGT00940000155949 ENSGT00390000012762.v ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT01050000244898.b.b.e.a ENSGT00940000165677 ENSGT00940000156035 ENSGT01080000257489 Characoidei ANCESTRAL SPECIES 35 ENSGT00940000157242.a.a ENSGT00530000067979 ENSGT00940000166272 ENSGT00940000164944 ENSGT00940000166263 ENSGT00940000158491.a ENSGT00940000153352.A ENSGT00940000166675 ENSGT00940000155949 ENSGT00390000012762.v ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT01050000244898.b.b.e.a ENSGT00940000165677 ENSGT00940000156035 ENSGT01080000257489 Red-bellied piranha DUPLICATION Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 2 rps6ka4 (ENSPNAG00000022780) FLRT1 (ENSPNAG00000022683) stip1 (ENSPNAG00000003727) FERMT3 (ENSPNAG00000022619) ENSPNAG00000022600 ENSPNAG00000022479 RABL6 (ENSPNAG00000022005) AJM1 (ENSPNAG00000021978) MAPKAP1 (ENSPNAG00000021966) ENSPNAG00000021881 mvb12ba (ENSPNAG00000021820) lmx1ba (ENSPNAG00000021782) zbtb43 (ENSPNAG00000005085) RALGPS1 (ENSPNAG00000021738) angptl2a (ENSPNAG00000021640) ENSPNAG00000021618 #22 ENSPNAG00000021588 #22 fbp1b (ENSPNAG00000021552) ttc33 (ENSPNAG00000021516) ptger4b (ENSPNAG00000021508) MAP1B (ENSPNAG00000021500) ptcd2 (ENSPNAG00000021490) TNPO1 (ENSPNAG00000021484) fcho2 (ENSPNAG00000021417) TMEM174 (ENSPNAG00000006042) foxd1 (ENSPNAG00000021362) btf3 (ENSPNAG00000006350) ankra2 (ENSPNAG00000021321) ENSPNAG00000021287 ENSPNAG00000021279 ARHGEF28 (ENSPNAG00000021256) Red-bellied piranha MODERN SPECIES 2 FLRT1 (ENSPNAG00000022683) stip1 (ENSPNAG00000003727) FERMT3 (ENSPNAG00000022619) ENSPNAG00000022600 ENSPNAG00000022479 RABL6 (ENSPNAG00000022005) AJM1 (ENSPNAG00000021978) MAPKAP1 (ENSPNAG00000021966) ENSPNAG00000021881 mvb12ba (ENSPNAG00000021820) lmx1ba (ENSPNAG00000021782) zbtb43 (ENSPNAG00000005085) RALGPS1 (ENSPNAG00000021738) angptl2a (ENSPNAG00000021640) ENSPNAG00000021618 #22 ENSPNAG00000021588 #22 fbp1b (ENSPNAG00000021552) ttc33 (ENSPNAG00000021516) ptger4b (ENSPNAG00000021508) MAP1B (ENSPNAG00000021500) ptcd2 (ENSPNAG00000021490) TNPO1 (ENSPNAG00000021484) fcho2 (ENSPNAG00000021417) TMEM174 (ENSPNAG00000006042) foxd1 (ENSPNAG00000021362) btf3 (ENSPNAG00000006350) ankra2 (ENSPNAG00000021321) ENSPNAG00000021287 ENSPNAG00000021279 ARHGEF28 (ENSPNAG00000021256) ENSPNAG00000021200 Red-bellied piranha MODERN SPECIES 39 ENSPNAG00000013772 rtkna (ENSPNAG00000002969) smn1 (ENSPNAG00000014007) hspb11 (ENSPNAG00000014017) mccc2 (ENSPNAG00000014077) DAB2 (ENSPNAG00000014124) ENSPNAG00000014140 ENSPNAG00000003035 ENSPNAG00000014151 ENSPNAG00000014161 TMEM8B (ENSPNAG00000014213) ENSPNAG00000014238 tars1 (ENSPNAG00000014293) gas1a (ENSPNAG00000014302) dapk1 (ENSPNAG00000014365) ctsla (ENSPNAG00000014392) #22 fbp2 (ENSPNAG00000014425) fbp1a (ENSPNAG00000014457) ENSPNAG00000014507 dmrt1 (ENSPNAG00000014524) dmrt3a (ENSPNAG00000014527) dmrt2a (ENSPNAG00000003158) smarca2 (ENSPNAG00000014635) adamts3 (ENSPNAG00000014731) NPFFR2 (ENSPNAG00000014742) ENSPNAG00000014754 gc (ENSPNAG00000003246) slc4a4a (ENSPNAG00000014878) mob1ba (ENSPNAG00000014908) grsf1 (ENSPNAG00000014912) rufy3 (ENSPNAG00000015037) Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 137 stip1 (ENSAMXG00000009114) FERMT3 (ENSAMXG00000009097) kat5b (ENSAMXG00000009091) ENSAMXG00000041736 ENSAMXG00000009081 ENSAMXG00000035367 RABL6 (ENSAMXG00000009074) ENSAMXG00000024886 MAPKAP1 (ENSAMXG00000009059) ENSAMXG00000009040 mvb12ba (ENSAMXG00000009024) lmx1ba (ENSAMXG00000009021) zbtb43 (ENSAMXG00000024865) RALGPS1 (ENSAMXG00000042436) angptl2a (ENSAMXG00000008131) si:dkey-26g8.5 (ENSAMXG00000008154) #22 ttc33 (ENSAMXG00000035459) fbp1b (ENSAMXG00000008165) ptger4b (ENSAMXG00000008187) dnaja3b (ENSAMXG00000037061) ENSAMXG00000030056 MAP1B (ENSAMXG00000030234) ptcd2 (ENSAMXG00000029404) TNPO1 (ENSAMXG00000009842) fcho2 (ENSAMXG00000009862) TMEM174 (ENSAMXG00000042241) foxd1 (ENSAMXG00000025555) btf3 (ENSAMXG00000043535) ankra2 (ENSAMXG00000009909) ENSAMXG00000009913 ARHGEF28 (ENSAMXG00000009924) Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 28 gas1a (ENSAMXG00000025638) dapk1 (ENSAMXG00000012193) ctsla (ENSAMXG00000043917) #22 ctsla (ENSAMXG00000042927) #22 fbp2 (ENSAMXG00000012219) fbp1a (ENSAMXG00000012239) ENSAMXG00000012523 dmrt1 (ENSAMXG00000033247) dmrt3a (ENSAMXG00000033043) dmrt2a (ENSAMXG00000012490) smarca2 (ENSAMXG00000012404) adamts3 (ENSAMXG00000012344) NPFFR2 (ENSAMXG00000012321) gc (ENSAMXG00000012314) slc4a4a (ENSAMXG00000012301) mob1ba (ENSAMXG00000013309) grsf1 (ENSAMXG00000012270) rufy3 (ENSAMXG00000012255) ENSAMXG00000039760 Mexicana tetra MODERN SPECIES 28 gas1a (ENSAMXG00000025638) dapk1 (ENSAMXG00000012193) ctsla (ENSAMXG00000043917) #22 ctsla (ENSAMXG00000042927) #22 fbp2 (ENSAMXG00000012219) fbp1a (ENSAMXG00000012239) ENSAMXG00000012523 dmrt1 (ENSAMXG00000033247) dmrt3a (ENSAMXG00000033043) dmrt2a (ENSAMXG00000012490) smarca2 (ENSAMXG00000012404) adamts3 (ENSAMXG00000012344) NPFFR2 (ENSAMXG00000012321) gc (ENSAMXG00000012314) slc4a4a (ENSAMXG00000012301) mob1ba (ENSAMXG00000013309) grsf1 (ENSAMXG00000012270) rufy3 (ENSAMXG00000012255) Electric eel DUPLICATION Electric eel MODERN SPECIES 114 ENSEEEG00000013480 ENSEEEG00000013483 ENSEEEG00000013508 si:dkey-26g8.5 (ENSEEEG00000013915) #22 fbp1b (ENSEEEG00000014122) ttc33 (ENSEEEG00000014182) ptger4b (ENSEEEG00000014183) MAP1B (ENSEEEG00000014186) ptcd2 (ENSEEEG00000014188) TNPO1 (ENSEEEG00000014224) fcho2 (ENSEEEG00000014854) TMEM174 (ENSEEEG00000014858) foxd1 (ENSEEEG00000014859) btf3 (ENSEEEG00000014862) ankra2 (ENSEEEG00000014880) ARHGEF28 (ENSEEEG00000014886) ENC1 (ENSEEEG00000014893) ENSEEEG00000014901 osr2 (ENSEEEG00000014907) Electric eel MODERN SPECIES 20 TMEM8B (ENSEEEG00000004822) ENSEEEG00000004819 tars1 (ENSEEEG00000003576) gas1a (ENSEEEG00000003531) dapk1 (ENSEEEG00000003337) ctsla (ENSEEEG00000003114) #22 fbp2 (ENSEEEG00000003100) fbp1a (ENSEEEG00000003085) ENSEEEG00000003075 dmrt1 (ENSEEEG00000003068) dmrt3a (ENSEEEG00000003065) dmrt2a (ENSEEEG00000003032) smarca2 (ENSEEEG00000002979) adamts3 (ENSEEEG00000002940) NPFFR2 (ENSEEEG00000002938) gc (ENSEEEG00000002926) slc4a4a (ENSEEEG00000001876) mob1ba (ENSEEEG00000001798) grsf1 (ENSEEEG00000001796) rufy3 (ENSEEEG00000001085) ENSEEEG00000001024 Euteleosteomorpha ANCESTRAL SPECIES 105 ENSGT00940000159928 ENSGT00940000177226 ENSGT00940000159371 ENSGT00950000183104.A.a.b ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000156859 ENSGT00490000043385 ENSGT00940000153241.A ENSGT01030000234519.e.a.a.a.b.f ENSGT00940000155949 ENSGT00940000157861 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000158529 ENSGT00940000156035.y.a Protacanthopterygii DUPLICATION Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 36 ENSGT00950000182925.B ENSGT00940000168229 ENSGT00940000156081.j ENSGT00940000166301 ENSGT00940000163895 ENSGT00940000160228 ENSGT01100000263564.b ENSGT00390000004950.a.b ENSGT00390000004950.a.a ENSGT00530000063749.c.b ENSGT00940000159623 ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00940000153321.b.b.bb.a #22 ENSGT00940000153321.b.b.bb.b #22 ENSGT00390000015513.a.b.b ENSGT00940000155227.a ENSGT00390000013415.b ENSGT01100000263865 ENSGT00940000155770.b.b ENSGT00940000154422.d ENSGT00940000161347.a.b ENSGT00940000161347.a.a ENSGT00940000153434.c.b ENSGT00960000193246 ENSGT00940000155181.c.b ENSGT00510000047171.y ENSGT00940000160006 ENSGT00940000153662.B Salmoninae ANCESTRAL SPECIES 364 ENSGT00940000157286.h ENSGT00940000156183.i.b ENSGT00940000156730.b.d.a ENSGT01050000244968.c.c.a ENSGT00940000161260.g ENSGT00950000182925.B.e ENSGT00940000156081.j.i ENSGT00940000166301.f ENSGT00940000160228.g ENSGT00390000004950.a.a.a.a ENSGT00530000063749.c.b.m ENSGT00940000159623.m ENSGT00390000012762.s ENSGT00940000155567.vd.a ENSGT00390000001195.a.b.c ENSGT00940000153321.b.b.bb.a #22 ENSGT00390000015513.a.b.b.a ENSGT00940000155227.a.c ENSGT00390000013415.b.d.a.a ENSGT01100000263865.a Huchen DUPLICATION Huchen DUPLICATION Huchen DUPLICATION Huchen MODERN SPECIES 51 mtrex (ENSHHUG00000026637) PLPP1 (ENSHHUG00000026621) CSGALNACT1 (ENSHHUG00000026618) nxnl2 (ENSHHUG00000026613) ENSHHUG00000026583 ENSHHUG00000026562 ENSHHUG00000026388 srp19 (ENSHHUG00000026361) apc (ENSHHUG00000026358) epb41l4a (ENSHHUG00000026349) ENSHHUG00000026343 dab2 (ENSHHUG00000026331) ENSHHUG00000026330 gas1b (ENSHHUG00000026327) ctsla (ENSHHUG00000026223) #22 ctsla (ENSHHUG00000026221) #22 Huchen MODERN SPECIES 9921 ctsla (ENSHHUG00000009763) #22 ENSHHUG00000009762 Huchen MODERN SPECIES 51 ENSHHUG00000026812 mtrex (ENSHHUG00000026637) PLPP1 (ENSHHUG00000026621) CSGALNACT1 (ENSHHUG00000026618) nxnl2 (ENSHHUG00000026613) ENSHHUG00000026583 ENSHHUG00000026562 ENSHHUG00000026388 srp19 (ENSHHUG00000026361) apc (ENSHHUG00000026358) epb41l4a (ENSHHUG00000026349) ENSHHUG00000026343 dab2 (ENSHHUG00000026331) ENSHHUG00000026330 gas1b (ENSHHUG00000026327) ctsla (ENSHHUG00000026223) #22 ctsla (ENSHHUG00000026221) #22 Huchen MODERN SPECIES 2859 ctsla (ENSHHUG00000022928) #22 fbp1b (ENSHHUG00000022760) thbs4b (ENSHHUG00000022154) zgc:73226 (ENSHHUG00000022143) Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES 24 ENSGT00940000156730.b.c.a ENSGT00940000156730.b.d.a ENSGT01050000244968.c.c.a ENSGT00940000161260.g ENSGT00950000182925.B.e ENSGT00940000156081.j.i ENSGT00940000166301.f ENSGT00940000160228.g ENSGT00390000004950.a.a.a.a ENSGT00390000004950.a.a.b ENSGT00530000063749.c.b.m ENSGT00940000159623.m ENSGT00390000012762.s ENSGT00940000155567.vd.a ENSGT00390000001195.a.b.c ENSGT00940000153321.b.b.bb.a.c #22 ENSGT00390000015513.a.b.b.a ENSGT00940000155227.a.c ENSGT00390000013415.b.d.a.a ENSGT01100000263865.a ENSGT00940000155770.b.b ENSGT00940000154422.d.h ENSGT00940000161347.a.b.d.b ENSGT00940000161347.a.a.b ENSGT00940000153434.c.b ENSGT00940000155181.c.b.i ENSGT00510000047171.y.a ENSGT00940000160006.l ENSGT00940000153662.B.e ENSGT00390000015874.x ENSGT00390000014003 Salmo DUPLICATION Salmo DUPLICATION Salmo ANCESTRAL SPECIES ENSGT00940000153321.b.b.bb.a.c.a.a #22 River trout MODERN SPECIES 15 ENSSTUG00000014037 ENSSTUG00000014044 mtrex (ENSSTUG00000014080) PLPP1 (ENSSTUG00000014362) CSGALNACT1 (ENSSTUG00000014444) nxnl2 (ENSSTUG00000014449) ENSSTUG00000014457 tdgf1 (ENSSTUG00000014537) ENSSTUG00000014752 srp19 (ENSSTUG00000019375) apc (ENSSTUG00000019403) epb41l4a (ENSSTUG00000019554) ENSSTUG00000019712 dab2 (ENSSTUG00000019851) gas1b (ENSSTUG00000019877) ctsla (ENSSTUG00000019899) #22 ctsla (ENSSTUG00000020049) #22 fbp1b (ENSSTUG00000020147) thbs4b (ENSSTUG00000020235) zgc:73226 (ENSSTUG00000021507) ENSSTUG00000021527 ENSSTUG00000021558 prune2 (ENSSTUG00000022148) gna14 (ENSSTUG00000022180) ENSSTUG00000022191 hnrpkl (ENSSTUG00000003200) ntrk2b (ENSSTUG00000003327) kcmf1 (ENSSTUG00000003388) camk4 (ENSSTUG00000003451) wdr36 (ENSSTUG00000003848) slc25a46 (ENSSTUG00000005518) Atlantic salmon MODERN SPECIES LPP1 (ENSSSAG00000044187) ENSSSAG00000044262 ENSSSAG00000107374 ENSSSAG00000044446 ENSSSAG00000105333 ENSSSAG00000089158 ENSSSAG00000121162 ENSSSAG00000109983 ENSSSAG00000049935 ENSSSAG00000089074 srp19 (ENSSSAG00000054790) ENSSSAG00000054828 epb41l4a (ENSSSAG00000056138) ENSSSAG00000056162 ENSSSAG00000056184 ENSSSAG00000056287 #22 ENSSSAG00000101536 ENSSSAG00000097868 #22 ENSSSAG00000096256 #22 ENSSSAG00000056206 #22 ENSSSAG00000056305 ENSSSAG00000056442 ENSSSAG00000065996 ENSSSAG00000091085 ENSSSAG00000066035 bmcc1 (ENSSSAG00000075176) gna14 (ENSSSAG00000066616) ENSSSAG00000066621 HNRPK (ENSSSAG00000066640) ntrk2b (ENSSSAG00000066722) ENSSSAG00000096474 Salmo ANCESTRAL SPECIES 54 ENSGT00940000157286.h ENSGT00940000156183.i.b ENSGT00940000156730.b.c.a ENSGT01050000244968.c.c.a ENSGT00940000161260.g ENSGT00940000156081.j.i ENSGT00940000166301.f ENSGT00940000160228.g ENSGT00390000004950.a.a.a.a ENSGT00530000063749.c.b.m ENSGT00940000159623.m ENSGT00390000012762.s ENSGT00940000155567.vd.a ENSGT00390000001195.a.b.c ENSGT00940000153321.b.b.bb.a.c.b #22 ENSGT00940000153321.b.b.bb.a.c.a.b #22 ENSGT00390000015513.a.b.b.a ENSGT00940000155227.a.c ENSGT00390000013415.b.d.b ENSGT01100000263865.a ENSGT00940000155770.b.b ENSGT00940000154422.d.h ENSGT00940000161347.a.b.d.b ENSGT00940000162569.a.d ENSGT00940000161347.a.a.a ENSGT00940000153434.c.b ENSGT00940000155181.c.b.i ENSGT00510000047171.y.a ENSGT00940000160006.l ENSGT00940000153662.B.e ENSGT00390000015874.x Atlantic salmon MODERN SPECIES ENSSSAG00000105333 ENSSSAG00000089158 ENSSSAG00000121162 ENSSSAG00000109983 ENSSSAG00000049935 ENSSSAG00000089074 srp19 (ENSSSAG00000054790) ENSSSAG00000054828 epb41l4a (ENSSSAG00000056138) ENSSSAG00000056162 ENSSSAG00000056184 ENSSSAG00000056287 #22 ENSSSAG00000101536 ENSSSAG00000097868 #22 ENSSSAG00000096256 #22 ENSSSAG00000056206 #22 ENSSSAG00000056305 ENSSSAG00000056442 ENSSSAG00000065996 ENSSSAG00000091085 ENSSSAG00000066035 bmcc1 (ENSSSAG00000075176) gna14 (ENSSSAG00000066616) ENSSSAG00000066621 HNRPK (ENSSSAG00000066640) ntrk2b (ENSSSAG00000066722) ENSSSAG00000096474 yoy6 (ENSSSAG00000066739) camk4 (ENSSSAG00000066757) wdr36 (ENSSSAG00000066853) slc25a46 (ENSSSAG00000091203) Salmo ANCESTRAL SPECIES 54 ENSGT00940000158788.f ENSGT00940000157286.h ENSGT00940000156183.i.b ENSGT00940000156730.b.c.a ENSGT01050000244968.c.c.a ENSGT00940000161260.g ENSGT00940000156081.j.i ENSGT00940000166301.f ENSGT00940000160228.g ENSGT00390000004950.a.a.a.a ENSGT00530000063749.c.b.m ENSGT00940000159623.m ENSGT00390000012762.s ENSGT00940000155567.vd.a ENSGT00390000001195.a.b.c ENSGT00940000153321.b.b.bb.a.c.b #22 ENSGT00940000153321.b.b.bb.a.c.a.b #22 ENSGT00390000015513.a.b.b.a ENSGT00940000155227.a.c ENSGT00390000013415.b.d.b ENSGT01100000263865.a ENSGT00940000155770.b.b ENSGT00940000154422.d.h ENSGT00940000161347.a.b.d.b ENSGT00940000162569.a.d ENSGT00940000161347.a.a.a ENSGT00940000153434.c.b ENSGT00940000155181.c.b.i ENSGT00510000047171.y.a ENSGT00940000160006.l ENSGT00940000153662.B.e Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES ENSSSAG00000044446 ENSSSAG00000105333 ENSSSAG00000089158 ENSSSAG00000121162 ENSSSAG00000109983 ENSSSAG00000049935 ENSSSAG00000089074 srp19 (ENSSSAG00000054790) ENSSSAG00000054828 epb41l4a (ENSSSAG00000056138) ENSSSAG00000056162 ENSSSAG00000056184 ENSSSAG00000056287 #22 ENSSSAG00000101536 ENSSSAG00000097868 #22 ENSSSAG00000096256 #22 ENSSSAG00000056206 #22 ENSSSAG00000056305 ENSSSAG00000056442 ENSSSAG00000065996 ENSSSAG00000091085 ENSSSAG00000066035 bmcc1 (ENSSSAG00000075176) gna14 (ENSSSAG00000066616) ENSSSAG00000066621 HNRPK (ENSSSAG00000066640) ntrk2b (ENSSSAG00000066722) ENSSSAG00000096474 yoy6 (ENSSSAG00000066739) camk4 (ENSSSAG00000066757) wdr36 (ENSSSAG00000066853) Atlantic salmon MODERN SPECIES ENSSSAG00000107374 ENSSSAG00000044446 ENSSSAG00000105333 ENSSSAG00000089158 ENSSSAG00000121162 ENSSSAG00000109983 ENSSSAG00000049935 ENSSSAG00000089074 srp19 (ENSSSAG00000054790) ENSSSAG00000054828 epb41l4a (ENSSSAG00000056138) ENSSSAG00000056162 ENSSSAG00000056184 ENSSSAG00000056287 #22 ENSSSAG00000101536 ENSSSAG00000097868 #22 ENSSSAG00000096256 #22 ENSSSAG00000056206 #22 ENSSSAG00000056305 ENSSSAG00000056442 ENSSSAG00000065996 ENSSSAG00000091085 ENSSSAG00000066035 bmcc1 (ENSSSAG00000075176) gna14 (ENSSSAG00000066616) ENSSSAG00000066621 HNRPK (ENSSSAG00000066640) ntrk2b (ENSSSAG00000066722) ENSSSAG00000096474 yoy6 (ENSSSAG00000066739) camk4 (ENSSSAG00000066757) Oncorhynchus ANCESTRAL SPECIES 21 ENSGT00940000156183.i.b ENSGT00940000156730.b.d.a ENSGT01050000244968.c.c.a ENSGT00940000161260.g ENSGT00950000182925.B.e ENSGT00940000156081.j.i ENSGT00940000166301.f ENSGT00940000160228.g ENSGT01060000253613 ENSGT00390000004950.a.a.b ENSGT00530000063749.c.b.m ENSGT00940000159623.m ENSGT00390000012762.s ENSGT00940000155567.vd.a ENSGT00390000001195.a.b.c ENSGT00940000153321.b.b.bb.a.c #22 ENSGT00390000015513.a.b.b.a ENSGT00940000155227.a.c ENSGT00390000013415.b.d.a.a ENSGT01100000263865.a ENSGT00940000155770.b.b ENSGT00510000047710 ENSGT00940000155967.e ENSGT00940000156571.ab.b ENSGT00940000157329.i ENSGT00940000153510.b.m ENSGT00940000155881.i ENSGT00390000003175.a.b.j ENSGT00940000162090.c ENSGT01030000234578.A.a.j ENSGT00440000039914.`b Rainbow trout MODERN SPECIES 26 ENSOMYG00000031016 ENSOMYG00000030005 ENSOMYG00000029133 ENSOMYG00000063410 ENSOMYG00000072227 ENSOMYG00000024111 ENSOMYG00000066213 srp19 (ENSOMYG00000023047) ENSOMYG00000022911 EPB41L4A (ENSOMYG00000022603) ENSOMYG00000022400 ENSOMYG00000022297 ENSOMYG00000071439 ENSOMYG00000071840 ENSOMYG00000055675 ENSOMYG00000022195 #22 ENSOMYG00000022135 ENSOMYG00000022068 ENSOMYG00000022027 ENSOMYG00000071083 ENSOMYG00000021623 prune2 (ENSOMYG00000068300) gna14 (ENSOMYG00000021481) ENSOMYG00000021476 hnrpkl (ENSOMYG00000021325) ntrk2b (ENSOMYG00000021208) kcmf1 (ENSOMYG00000021194) camk4 (ENSOMYG00000021153) wdr36 (ENSOMYG00000020735) slc25a46 (ENSOMYG00000020613) ENSOMYG00000063641 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.bb.a.c #22 Coho salmon DUPLICATION Coho salmon DUPLICATION Coho salmon DUPLICATION Coho salmon DUPLICATION Coho salmon MODERN SPECIES 597 ENSOKIG00005038897 #22 ENSOKIG00005038819 #22 Coho salmon MODERN SPECIES 597 ENSOKIG00005038897 #22 ENSOKIG00005038819 #22 Coho salmon MODERN SPECIES 1097 ENSOKIG00005025842 #22 Coho salmon MODERN SPECIES 15 nop14 (ENSOKIG00005006291) ADD1 (ENSOKIG00005007032) ENSOKIG00005007228 DYM (ENSOKIG00005007248) smad7 (ENSOKIG00005007281) CTIF (ENSOKIG00005007305) ZBTB7C (ENSOKIG00005007314) ENSOKIG00005007316 ENSOKIG00005007320 mapk10 (ENSOKIG00005007381) KLHL8 (ENSOKIG00005008274) ENSOKIG00005008336 PPEF2 (ENSOKIG00005008386) NUP54 (ENSOKIG00005008734) ENSOKIG00005008780 ENSOKIG00005008833 #22 ENSOKIG00005008876 #22 ENSOKIG00005008900 fbp1b (ENSOKIG00005008909) ENSOKIG00005008962 THBS4 (ENSOKIG00005009058) ENSOKIG00005010451 ENSOKIG00005010462 ENSOKIG00005010487 prune2 (ENSOKIG00005010672) gna14 (ENSOKIG00005010682) ENSOKIG00005010690 hnrpkl (ENSOKIG00005010719) ntrk2b (ENSOKIG00005010857) kcmf1 (ENSOKIG00005010895) camk4 (ENSOKIG00005010932) Coho salmon MODERN SPECIES 15 ADD1 (ENSOKIG00005007032) ENSOKIG00005007228 DYM (ENSOKIG00005007248) smad7 (ENSOKIG00005007281) CTIF (ENSOKIG00005007305) ZBTB7C (ENSOKIG00005007314) ENSOKIG00005007316 ENSOKIG00005007320 mapk10 (ENSOKIG00005007381) KLHL8 (ENSOKIG00005008274) ENSOKIG00005008336 PPEF2 (ENSOKIG00005008386) NUP54 (ENSOKIG00005008734) ENSOKIG00005008780 ENSOKIG00005008833 #22 ENSOKIG00005008876 #22 ENSOKIG00005008900 fbp1b (ENSOKIG00005008909) ENSOKIG00005008962 THBS4 (ENSOKIG00005009058) ENSOKIG00005010451 ENSOKIG00005010462 ENSOKIG00005010487 prune2 (ENSOKIG00005010672) gna14 (ENSOKIG00005010682) ENSOKIG00005010690 hnrpkl (ENSOKIG00005010719) ntrk2b (ENSOKIG00005010857) kcmf1 (ENSOKIG00005010895) camk4 (ENSOKIG00005010932) wdr36 (ENSOKIG00005011127) Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 6 ENSOTSG00005017658 plcb3 (ENSOTSG00005013663) gpha2 (ENSOTSG00005013642) PPP2R5B (ENSOTSG00005013641) ENSOTSG00005013640 lgi2a (ENSOTSG00005013639) sepsecs (ENSOTSG00005013634) SLC24A2 (ENSOTSG00005013369) rpl34 (ENSOTSG00005013367) ostc (ENSOTSG00005013366) SH2D1A (ENSOTSG00005013364) ENSOTSG00005012354 ENSOTSG00005012349 ENSOTSG00005012347 #22 ENSOTSG00005012346 ctsla (ENSOTSG00005012343) #22 fbp1b (ENSOTSG00005012342) thbs4b (ENSOTSG00005009809) zgc:73226 (ENSOTSG00005009807) ENSOTSG00005009806 ENSOTSG00005008482 gna14 (ENSOTSG00005008478) ENSOTSG00005008477 hnrpkl (ENSOTSG00005008476) ntrk2b (ENSOTSG00005008474) kcmf1 (ENSOTSG00005008473) camk4 (ENSOTSG00005008467) wdr36 (ENSOTSG00005008143) slc25a46 (ENSOTSG00005008139) ENSOTSG00005008137 man2a1 (ENSOTSG00005007497) Chinook salmon MODERN SPECIES 2917 ENSOTSG00005027034 ENSOTSG00005027033 VSTM2L (ENSOTSG00005027031) tgm2b (ENSOTSG00005023872) ENSOTSG00005023851 quo (ENSOTSG00005023848) ENSOTSG00005023847 DLGAP4 (ENSOTSG00005023846) myl9a (ENSOTSG00005023845) ENSOTSG00005023842 ENSOTSG00005023841 tpra1 (ENSOTSG00005023829) ENSOTSG00005023826 ENSOTSG00005023825 #22 ENSOTSG00005023824 ctsla (ENSOTSG00005023823) #22 fbp1b (ENSOTSG00005023821) thbs4b (ENSOTSG00005022363) zgc:73226 (ENSOTSG00005022360) ENSOTSG00005022359 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.bb.a.d #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000153321.b.b.bb.a.d #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.bb.a.d #22 Coho salmon MODERN SPECIES 1406 ENSOKIG00005049607 #22 ENSOKIG00005049614 Salmo ANCESTRAL SPECIES ENSGT00940000153321.b.b.bb.a.d #22 River trout MODERN SPECIES 15 tmem232 (ENSSTUG00000005555) slc25a46 (ENSSTUG00000005518) wdr36 (ENSSTUG00000003848) camk4 (ENSSTUG00000003451) kcmf1 (ENSSTUG00000003388) ntrk2b (ENSSTUG00000003327) hnrpkl (ENSSTUG00000003200) ENSSTUG00000022191 gna14 (ENSSTUG00000022180) prune2 (ENSSTUG00000022148) ENSSTUG00000021558 ENSSTUG00000021527 zgc:73226 (ENSSTUG00000021507) thbs4b (ENSSTUG00000020235) fbp1b (ENSSTUG00000020147) ctsla (ENSSTUG00000020049) #22 ctsla (ENSSTUG00000019899) #22 gas1b (ENSSTUG00000019877) dab2 (ENSSTUG00000019851) ENSSTUG00000019712 epb41l4a (ENSSTUG00000019554) apc (ENSSTUG00000019403) srp19 (ENSSTUG00000019375) ENSSTUG00000014752 tdgf1 (ENSSTUG00000014537) ENSSTUG00000014457 nxnl2 (ENSSTUG00000014449) CSGALNACT1 (ENSSTUG00000014444) PLPP1 (ENSSTUG00000014362) mtrex (ENSSTUG00000014080) ENSSTUG00000014044 Northern pike MODERN SPECIES 13 ENSELUG00000004723 tdgf1 (ENSELUG00000004699) ENSELUG00000031149 ENSELUG00000033546 ENSELUG00000004663 ENSELUG00000004603 srp19 (ENSELUG00000004594) apc (ENSELUG00000004514) ENSELUG00000004398 epb41l4a (ENSELUG00000004455) zgc:162472 (ENSELUG00000004388) dab2 (ENSELUG00000004348) c9 (ENSELUG00000004297) gas1b (ENSELUG00000004263) ENSELUG00000034318 ENSELUG00000004254 #22 fbp1b (ENSELUG00000004239) thbs4b (ENSELUG00000004213) zgc:73226 (ENSELUG00000027318) ENSELUG00000004145 ENSELUG00000004124 prune2 (ENSELUG00000004086) ENSELUG00000004061 hnrpkl (ENSELUG00000004017) ENSELUG00000030452 ntrk2b (ENSELUG00000003955) kcmf1 (ENSELUG00000003935) camk4 (ENSELUG00000003902) wdr36 (ENSELUG00000003875) slc25a46 (ENSELUG00000003840) tmem232 (ENSELUG00000003822) Protacanthopterygii ANCESTRAL SPECIES 36 ENSGT00940000168229 ENSGT00940000156081.j ENSGT00940000166301 ENSGT00940000163895 ENSGT00940000160228 ENSGT01100000263564.b ENSGT00390000004950.a.b ENSGT00390000004950.a.a ENSGT00530000063749.c.b ENSGT00940000159623 ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00940000153321.b.b.bb.a #22 ENSGT00940000153321.b.b.bb.b #22 ENSGT00390000015513.a.b.b ENSGT00940000155227.a ENSGT00390000013415.b ENSGT01100000263865 ENSGT00940000155770.b.b ENSGT00940000154422.d ENSGT00940000161347.a.b ENSGT00940000161347.a.a ENSGT00940000153434.c.b ENSGT00960000193246 ENSGT00940000155181.c.b ENSGT00510000047171.y ENSGT00940000160006 ENSGT00940000153662.B ENSGT00390000015874 Salmoninae ANCESTRAL SPECIES 52 ENSGT00940000161260.h ENSGT00950000182925.B.f ENSGT00940000168229 ENSGT00940000156081.j.j ENSGT00940000166301.e ENSGT00940000160228.h ENSGT01100000263564.b.j.a ENSGT01100000263564.b.i ENSGT00390000004950.a.b ENSGT00530000063749.c.b.n ENSGT00940000159623.n ENSGT00390000012762.t ENSGT00940000155567.vd.b ENSGT00940000159777 ENSGT00390000001195.a.b.d ENSGT00940000153321.b.b.bb.b #22 ENSGT00390000015513.a.b.b.b ENSGT00940000155227.a.d ENSGT00390000013415.b.c ENSGT01100000263865.b ENSGT00940000154422.d.g ENSGT00940000161347.a.b.d.a ENSGT00940000162569.a.d ENSGT00940000154422.d.h ENSGT00940000161347.a.b.d.b ENSGT00940000161347.a.a ENSGT00940000153434.c.b ENSGT00940000155181.c.b.i ENSGT00510000047171.y.a ENSGT00940000160006.l ENSGT00940000153662.B.e Salmoninae_a ANCESTRAL SPECIES 57 ENSGT00950000182925.B.f ENSGT00940000168229 ENSGT00940000156081.j.j ENSGT00940000166301.e ENSGT00940000160228.h ENSGT01100000263564.b.j.a ENSGT01100000263564.b.i ENSGT00390000004950.a.b ENSGT00530000063749.c.b.n ENSGT00940000159623.n ENSGT00390000012762.t ENSGT00940000155567.vd.b ENSGT00940000159777 ENSGT00390000001195.a.b.d ENSGT01100000263491.a.b.b.c.b.k.a.a.a ENSGT00940000153321.b.b.bb.b #22 ENSGT00390000015513.a.b.b.b ENSGT00940000155227.a.d ENSGT00390000013415.b.c ENSGT01100000263865.b ENSGT00940000154422.d.g ENSGT00940000161347.a.a.a ENSGT00960000193246 ENSGT00940000155181.c.b.j ENSGT00510000047171.y.b ENSGT00940000160006.k ENSGT00940000153662.B.f ENSGT00390000015874.w ENSGT01030000234638.b.b.c.b.d ENSGT00940000154585.f ENSGT00940000154997.fb.b Oncorhynchus ANCESTRAL SPECIES 47 ENSGT00950000182925.B.f ENSGT00940000168229 ENSGT00940000156081.j.j ENSGT00940000166301.e ENSGT00940000160228.h ENSGT01100000263564.b.j.a ENSGT01100000263564.b.i ENSGT00390000004950.a.b ENSGT00530000063749.c.b.n ENSGT00940000159623.n ENSGT00940000155567.vd.b ENSGT00940000159777 ENSGT00390000001195.a.b.d ENSGT01100000263491.a.b.b.c.b.k.a.a.a ENSGT01100000263491.a.b.b.c.b.k.a.a.b.a.a ENSGT00940000153321.b.b.bb.b #22 ENSGT00390000015513.a.b.b.b ENSGT00940000155227.a.d ENSGT00390000013415.b.c ENSGT01100000263865.b ENSGT00940000154422.d.g ENSGT00940000161347.a.b.d.a ENSGT00940000162569.a.d ENSGT00940000161347.a.b.c ENSGT00940000154422.d.h ENSGT00940000161347.a.b.d.b ENSGT00940000161347.a.a.b ENSGT00940000153434.c.b ENSGT00940000155181.c.b.i ENSGT00510000047171.y.a ENSGT00940000160006.l Oncorhynchus_a ANCESTRAL SPECIES 48 ENSGT00950000182925.B.f ENSGT00940000168229 ENSGT00940000156081.j.j ENSGT00940000166301.e ENSGT00940000160228.h ENSGT01100000263564.b.j.a ENSGT01100000263564.b.i ENSGT00390000004950.a.b ENSGT00530000063749.c.b.n ENSGT00940000159623.n ENSGT00940000155567.vd.b ENSGT00940000159777 ENSGT00390000001195.a.b.d ENSGT01100000263491.a.b.b.c.b.k.a.a.a ENSGT01100000263491.a.b.b.c.b.k.a.a.b.a.a ENSGT00940000153321.b.b.bb.b #22 ENSGT00390000015513.a.b.b.b ENSGT00940000155227.a.d ENSGT00390000013415.b.c ENSGT01100000263865.b ENSGT00940000154422.d.g ENSGT00940000161347.a.a.a ENSGT00960000193246 ENSGT00940000155181.c.b.j ENSGT00510000047171.y.b ENSGT00940000160006.k ENSGT00940000153662.B.f ENSGT00390000015874.w ENSGT01100000263590.b.b.a.b.a ENSGT01030000234638.b.b.c.b.d ENSGT00940000154585.f Chinook salmon MODERN SPECIES 33 ENSOTSG00005032943 ENSOTSG00005032945 tdgf1 (ENSOTSG00005032948) ENSOTSG00005032970 ENSOTSG00005033813 ENSOTSG00005033814 srp19 (ENSOTSG00005033815) apc (ENSOTSG00005033819) epb41l4a (ENSOTSG00005033905) dab2 (ENSOTSG00005033945) c9 (ENSOTSG00005033947) gas1b (ENSOTSG00005034535) ENSOTSG00005034538 ENSOTSG00005034539 ENSOTSG00005034541 ctsla (ENSOTSG00005034544) #22 fbp1b (ENSOTSG00005034623) thbs4b (ENSOTSG00005034663) zgc:73226 (ENSOTSG00005041818) ENSOTSG00005041821 prune2 (ENSOTSG00005041822) ENSOTSG00005041824 HNRNPK (ENSOTSG00005041830) ENSOTSG00005041970 ntrk2b (ENSOTSG00005041972) kcmf1 (ENSOTSG00005041974) camk4 (ENSOTSG00005041976) wdr36 (ENSOTSG00005042056) slc25a46 (ENSOTSG00005042057) ENSOTSG00005042058 man2a1 (ENSOTSG00005042059) Coho salmon MODERN SPECIES 26 ENSOKIG00005001810 ENSOKIG00005003147 ENSOKIG00005003151 ENSOKIG00005003155 ENSOKIG00005003157 C3AR1 (ENSOKIG00005003163) SRP19 (ENSOKIG00005003167) apc (ENSOKIG00005003218) epb41l4a (ENSOKIG00005003337) dab2 (ENSOKIG00005003439) c9 (ENSOKIG00005003468) ENSOKIG00005003518 gas1b (ENSOKIG00005003524) ENSOKIG00005003540 ENSOKIG00005003551 ctsla (ENSOKIG00005003560) #22 ENSOKIG00005003595 thbs4b (ENSOKIG00005003779) zgc:73226 (ENSOKIG00005007887) ENSOKIG00005007919 ENSOKIG00005007977 HNRNPK (ENSOKIG00005008081) ntrk2b (ENSOKIG00005008221) kcmf1 (ENSOKIG00005008236) camk4 (ENSOKIG00005008303) wdr36 (ENSOKIG00005008562) slc25a46 (ENSOKIG00005008759) ENSOKIG00005008798 man2a1 (ENSOKIG00005008861) pja2 (ENSOKIG00005009403) FER (ENSOKIG00005009451) Rainbow trout MODERN SPECIES 3 epb41l4a (ENSOMYG00000033729) ENSOMYG00000053133 dab2 (ENSOMYG00000033746) c9 (ENSOMYG00000033783) ENSOMYG00000075240 gas1b (ENSOMYG00000033869) ENSOMYG00000076518 ENSOMYG00000057730 ENSOMYG00000033903 ENSOMYG00000067262 ENSOMYG00000058473 ENSOMYG00000061047 ENSOMYG00000052625 ENSOMYG00000061092 ENSOMYG00000033884 ctsla (ENSOMYG00000033910) #22 ENSOMYG00000033938 ENSOMYG00000034245 ENSOMYG00000034935 ENSOMYG00000048828 ENSOMYG00000066080 prune2 (ENSOMYG00000034960) gna14 (ENSOMYG00000070744) ENSOMYG00000034987 ENSOMYG00000057808 ENSOMYG00000035010 ntrk2b (ENSOMYG00000035051) kcmf1 (ENSOMYG00000035076) camk4 (ENSOMYG00000035146) slc25a46 (ENSOMYG00000035403) man2a1 (ENSOMYG00000035568) Salmo ANCESTRAL SPECIES 13 ENSGT00940000168229 ENSGT00940000156081.j.j ENSGT00940000166301.e ENSGT00940000160228.h ENSGT01100000263564.b.j.a ENSGT01100000263564.b.j.b ENSGT01100000263564.b.i ENSGT00390000004950.a.b ENSGT00530000063749.c.b.n ENSGT00940000159623.n ENSGT00390000012762.t ENSGT00940000155567.vd.b ENSGT00940000159777 ENSGT00390000001195.a.b.d ENSGT01100000263491.a.b.b.c.b.k.a.a.a ENSGT00940000153321.b.b.bb.b #22 ENSGT00390000015513.a.b.b.b ENSGT00940000155227.a.d ENSGT00390000013415.b.c ENSGT01100000263865.b ENSGT00940000154422.d.g ENSGT00940000161347.a.b.d.a ENSGT00940000155181.c.b.j ENSGT00510000047171.y.b ENSGT00940000160006.k ENSGT00940000153662.B.f ENSGT00390000015874.w ENSGT01030000234638.b.b.c.b.d ENSGT00940000154585.f ENSGT00940000154997.fb.b ENSGT00940000159721.h.g River trout MODERN SPECIES 6 ENSSTUG00000002086 tdgf1 (ENSSTUG00000001849) ENSSTUG00000037310 C3AR1 (ENSSTUG00000037165) ENSSTUG00000037133 ENSSTUG00000037117 srp19 (ENSSTUG00000036949) apc (ENSSTUG00000036593) epb41l4a (ENSSTUG00000036424) ENSSTUG00000036389 dab2 (ENSSTUG00000036316) c9 (ENSSTUG00000036144) gas1b (ENSSTUG00000036132) ENSSTUG00000036104 ENSSTUG00000036089 ctsla (ENSSTUG00000036046) #22 fbp1b (ENSSTUG00000036010) thbs4b (ENSSTUG00000031623) zgc:73226 (ENSSTUG00000031492) ENSSTUG00000031477 ENSSTUG00000031459 prune2 (ENSSTUG00000031397) gna14 (ENSSTUG00000031312) HNRNPK (ENSSTUG00000031123) ntrk2b (ENSSTUG00000031090) ENSSTUG00000031088 kcmf1 (ENSSTUG00000031071) camk4 (ENSSTUG00000030917) wdr36 (ENSSTUG00000030441) slc25a46 (ENSSTUG00000030418) man2a1 (ENSSTUG00000028874) Atlantic salmon MODERN SPECIES 4 ENSSSAG00000077543 ENSSSAG00000077532 ENSSSAG00000077529 ENSSSAG00000077521 SRP19 (ENSSSAG00000077526) ENSSSAG00000077462 epb41l4a (ENSSSAG00000077409) ENSSSAG00000099880 ENSSSAG00000077386 dab2 (ENSSSAG00000077372) ENSSSAG00000077341 gas1b (ENSSSAG00000094608) ENSSSAG00000108794 ENSSSAG00000099490 ENSSSAG00000115678 catl1 (ENSSSAG00000077309) #22 ENSSSAG00000110197 ENSSSAG00000075293 ENSSSAG00000075195 ENSSSAG00000090788 ENSSSAG00000066601 ENSSSAG00000075062 ENSSSAG00000074996 ntrk2b (ENSSSAG00000110664) kcmf1 (ENSSSAG00000074954) camk4 (ENSSSAG00000074912) wdr36 (ENSSSAG00000074881) ENSSSAG00000109254 slc25a46 (ENSSSAG00000074875) man2a1 (ENSSSAG00000074518) ENSSSAG00000074501 Huchen MODERN SPECIES 1958 ENSHHUG00000026232 ENSHHUG00000026229 ENSHHUG00000026228 ENSHHUG00000026217 ctsla (ENSHHUG00000026052) #22 fbp1b (ENSHHUG00000026049) thbs4b (ENSHHUG00000025486) Protacanthopterygii ANCESTRAL SPECIES 97 ENSGT00940000155949 ENSGT00940000157861 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b.cb #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000158529 ENSGT00940000156035.y.a ENSGT00940000156771 ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a Northern pike MODERN SPECIES 12 psat1 (ENSELUG00000012823) ENSELUG00000012798 stambpb (ENSELUG00000012739) ppil2 (ENSELUG00000012512) ENSELUG00000011879 ENSELUG00000031321 mapk1 (ENSELUG00000011849) rufy3 (ENSELUG00000011773) ENSELUG00000011613 mccc2 (ENSELUG00000000415) TMEM8B (ENSELUG00000011515) tars1 (ENSELUG00000011403) gas1a (ENSELUG00000010947) gig2e (ENSELUG00000025963) dapk1 (ENSELUG00000010912) ctsla (ENSELUG00000010848) #22 fbp2 (ENSELUG00000010811) fbp1a (ENSELUG00000010788) ENSELUG00000010767 ENSELUG00000033087 dmrt1 (ENSELUG00000010698) dmrt3a (ENSELUG00000010386) dmrt2a (ENSELUG00000010372) SMARCA2 (ENSELUG00000010318) ENSELUG00000026581 adamts3 (ENSELUG00000010111) NPFFR2 (ENSELUG00000024861) slc4a4a (ENSELUG00000009950) Salmoninae ANCESTRAL SPECIES ENSGT00940000153321.b.b.cb #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.cb #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000153321.b.b.cb #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000153321.b.b.cb #22 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 6 ENSOTSG00005017660 PAIP2B (ENSOTSG00005017659) ENSOTSG00005017658 plcb3 (ENSOTSG00005013663) gpha2 (ENSOTSG00005013642) PPP2R5B (ENSOTSG00005013641) ENSOTSG00005013640 lgi2a (ENSOTSG00005013639) sepsecs (ENSOTSG00005013634) SLC24A2 (ENSOTSG00005013369) rpl34 (ENSOTSG00005013367) ostc (ENSOTSG00005013366) SH2D1A (ENSOTSG00005013364) ENSOTSG00005012354 ENSOTSG00005012349 ENSOTSG00005012347 #22 ENSOTSG00005012346 ctsla (ENSOTSG00005012343) #22 fbp1b (ENSOTSG00005012342) thbs4b (ENSOTSG00005009809) zgc:73226 (ENSOTSG00005009807) ENSOTSG00005009806 ENSOTSG00005008482 gna14 (ENSOTSG00005008478) ENSOTSG00005008477 hnrpkl (ENSOTSG00005008476) ntrk2b (ENSOTSG00005008474) kcmf1 (ENSOTSG00005008473) camk4 (ENSOTSG00005008467) wdr36 (ENSOTSG00005008143) slc25a46 (ENSOTSG00005008139) Chinook salmon MODERN SPECIES 2917 ENSOTSG00005027037 krt4 (ENSOTSG00005027035) ENSOTSG00005027034 ENSOTSG00005027033 VSTM2L (ENSOTSG00005027031) tgm2b (ENSOTSG00005023872) ENSOTSG00005023851 quo (ENSOTSG00005023848) ENSOTSG00005023847 DLGAP4 (ENSOTSG00005023846) myl9a (ENSOTSG00005023845) ENSOTSG00005023842 ENSOTSG00005023841 tpra1 (ENSOTSG00005023829) ENSOTSG00005023826 ENSOTSG00005023825 #22 ENSOTSG00005023824 ctsla (ENSOTSG00005023823) #22 fbp1b (ENSOTSG00005023821) thbs4b (ENSOTSG00005022363) zgc:73226 (ENSOTSG00005022360) ENSOTSG00005022359 Acanthomorphata ANCESTRAL SPECIES 13 ENSGT00940000156901.B ENSGT00940000163484 ENSGT00940000159371 ENSGT00950000183104.A.a.b ENSGT00940000153270.b.a ENSGT00940000155998 ENSGT00940000156859 ENSGT00490000043385 ENSGT00940000153241.A ENSGT01030000234519.e.a.a.a.b.f ENSGT00940000155949 ENSGT00940000157861 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771 ENSGT00940000161453 ENSGT00940000153189.A Cod MODERN SPECIES 19 ENSGMOG00000034745 ENSGMOG00000031138 ENSGMOG00000031220 ENSGMOG00000035395 ENSGMOG00000028125 ENSGMOG00000026868 ENSGMOG00000033046 ENSGMOG00000001464 ENSGMOG00000001526 ENSGMOG00000030991 ENSGMOG00000014679 ENSGMOG00000035108 tars1 (ENSGMOG00000013046) gas1a (ENSGMOG00000013082) dapk1 (ENSGMOG00000014466) ctsla (ENSGMOG00000014448) #22 fbp2 (ENSGMOG00000014434) fbp1a (ENSGMOG00000030884) ENSGMOG00000030371 ENSGMOG00000024075 dmrt1 (ENSGMOG00000014361) dmrt3a (ENSGMOG00000036823) dmrt2a (ENSGMOG00000029488) SMARCA2 (ENSGMOG00000014229) ENSGMOG00000032387 adamts3 (ENSGMOG00000014174) ENSGMOG00000014167 slc4a4a (ENSGMOG00000014112) ENSGMOG00000014080 ENSGMOG00000014047 ENSGMOG00000014031 Euacanthomorphacea ANCESTRAL SPECIES 14 ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771 ENSGT00940000161453 ENSGT00940000153189.A Pinecone sodierfish MODERN SPECIES 23 cfap299 (ENSMMDG00005013071) bmp3 (ENSMMDG00005013069) prkg2 (ENSMMDG00005013067) ENSMMDG00005013064 rasgef1ba (ENSMMDG00005013047) ENSMMDG00005013031 tmem175 (ENSMMDG00005013023) ENSMMDG00005012251 WDFY3 (ENSMMDG00005011129) ENSMMDG00005011103 ENSMMDG00005011100 ENSMMDG00005011095 ENSMMDG00005011079 ENSMMDG00005011076 dapk1 (ENSMMDG00005010990) ctsla (ENSMMDG00005010967) #22 fbp2 (ENSMMDG00005010961) fbp1a (ENSMMDG00005010960) ENSMMDG00005010956 dmrt1 (ENSMMDG00005010046) dmrt3a (ENSMMDG00005010039) dmrt2a (ENSMMDG00005010038) SMARCA2 (ENSMMDG00005009285) adamts3 (ENSMMDG00005009249) NPFFR2 (ENSMMDG00005009240) ENSMMDG00005009238 slc4a4a (ENSMMDG00005006622) rufy3 (ENSMMDG00005005076) grsf1 (ENSMMDG00005005016) mapk1 (ENSMMDG00005005013) ENSMMDG00005005006 Percomorphaceae ANCESTRAL SPECIES 2 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b ENSGT00940000158973.a.a ENSGT00940000159769.a.a ENSGT00950000182924.A.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT01060000248847 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771 ENSGT00940000161453 ENSGT00940000153189.A Tiger tail seahorse MODERN SPECIES 127 si:dkey-174n20.1 (ENSHCOG00000014916) CAMK2B (ENSHCOG00000014947) ENSHCOG00000014959 h2az2a (ENSHCOG00000014970) purbb (ENSHCOG00000014978) ENSHCOG00000014986 ENSHCOG00000014994 ENSHCOG00000014999 ENSHCOG00000015003 ENSHCOG00000015005 ENSHCOG00000015010 il1b (ENSHCOG00000015032) CNNM4 (ENSHCOG00000015068) ENSHCOG00000015119 ENSHCOG00000015155 ctsla (ENSHCOG00000015171) #22 fbp2 (ENSHCOG00000015189) fbp1a (ENSHCOG00000015217) ENSHCOG00000015238 dmrt1 (ENSHCOG00000015256) dmrt3a (ENSHCOG00000015270) dmrt2a (ENSHCOG00000015280) SMARCA2 (ENSHCOG00000015348) ENSHCOG00000015364 Percomorphaceae_B ANCESTRAL SPECIES 7 ENSGT00940000165623 ENSGT00970000193390.c.a.b ENSGT00940000158973.a.a ENSGT00940000159769.a.a ENSGT00940000156481.b ENSGT00950000182924.A.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT01060000248847 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Ovalentaria ANCESTRAL SPECIES 4 ENSGT00940000165623 ENSGT00970000193390.c.a.b ENSGT00940000158973.a.a ENSGT00940000159769.a.a ENSGT00940000156481.b ENSGT00950000182924.A.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT01060000248847 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Atherinomorphae ANCESTRAL SPECIES 1 ENSGT00970000193390.c.a.b.x ENSGT00940000177176 ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.w.b ENSGT01030000234583.a.a.c.b.a.b.c.b ENSGT00970000193390.c.a.b.w.a ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Oryzias ANCESTRAL SPECIES 56 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b.w.b.b.a ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.w.b.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b.c.a ENSGT00390000015513.a.a.b.c.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Oryzias_b ANCESTRAL SPECIES 94 ENSGT00940000165623 ENSGT00730000110943.B.d.a ENSGT00970000193390.c.a.b.w.b.b.a ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.w.b.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT01030000236765 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b.c.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a Javanese ricefish MODERN SPECIES 23 fbp1a (ENSOJAG00000001632) fbp2 (ENSOJAG00000001642) ENSOJAG00000001659 wsb2 (ENSOJAG00000000080) ENSOJAG00000000095 ENSOJAG00000000112 ENSOJAG00000000133 ENSOJAG00000000150 KCNT1 (ENSOJAG00000000265) ctsla (ENSOJAG00000000402) #22 fbp2 (ENSOJAG00000000434) ENSOJAG00000000483 fbp1a (ENSOJAG00000000490) ENSOJAG00000000498 ENSOJAG00000000512 dmrt1 (ENSOJAG00000000524) dmrt3a (ENSOJAG00000000532) dmrt2a (ENSOJAG00000000545) ENSOJAG00000000553 si:dkey-174n20.1 (ENSOJAG00000000565) SUSD2 (ENSOJAG00000000592) ENSOJAG00000000608 kremen1 (ENSOJAG00000000615) ENSOJAG00000000621 ENSOJAG00000000639 Indian medaka MODERN SPECIES 11 ENSOMEG00000010188 dmrt1 (ENSOMEG00000010203) ENSOMEG00000010225 ENSOMEG00000010239 hs3st1l2 (ENSOMEG00000010251) PURB (ENSOMEG00000010259) h2az2b (ENSOMEG00000010283) ENSOMEG00000010305 ENSOMEG00000010322 ENSOMEG00000010337 ENSOMEG00000010354 CNNM4 (ENSOMEG00000010394) ENSOMEG00000010592 dapk1 (ENSOMEG00000010654) ENSOMEG00000010685 ctsla (ENSOMEG00000010714) #22 fbp2 (ENSOMEG00000010741) fbp1a (ENSOMEG00000010783) ENSOMEG00000010823 ENSOMEG00000010843 ENSOMEG00000010873 PPEF2 (ENSOMEG00000010931) scarb2a (ENSOMEG00000010984) ENSOMEG00000011029 CCNG2 (ENSOMEG00000011063) RAB27B (ENSOMEG00000011093) poli (ENSOMEG00000011149) ENSOMEG00000011174 ENSOMEG00000011196 zgc:101858 (ENSOMEG00000011224) PPIL3 (ENSOMEG00000011263) Oryzias_a ANCESTRAL SPECIES 78 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b.w.b.b.a ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.w.b.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b.c.a ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A Japanese Medaka HdrR MODERN SPECIES 23 ENSORLG00000000288 si:dkey-174n20.1 (ENSORLG00000000265) ENSORLG00000000304 camk2b1 (ENSORLG00000000246) ENSORLG00000000224 ENSORLG00000027443 ENSORLG00000028832 hs3st1l2 (ENSORLG00000027259) ENSORLG00000028379 h2az2b (ENSORLG00000024700) ENSORLG00000000222 ENSORLG00000000217 CNNM4 (ENSORLG00000030135) ENSORLG00000023385 dapk1 (ENSORLG00000020799) ctsla (ENSORLG00000020801) #22 fbp2 (ENSORLG00000020804) fbp1a (ENSORLG00000020808) ENSORLG00000020812 dmrt1 (ENSORLG00000020817) dmrt3a (ENSORLG00000024387) dmrt2a (ENSORLG00000022893) ENSORLG00000027960 SMARCA2 (ENSORLG00000020820) ENSORLG00000024946 adamts3 (ENSORLG00000022164) NPFFR2 (ENSORLG00000023530) ENSORLG00000027229 slc4a4a (ENSORLG00000019992) rufy3 (ENSORLG00000019933) grsf1 (ENSORLG00000030211) Cyprinodontiformes ANCESTRAL SPECIES 1 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b.x ENSGT01030000234583.a.a.c.b.a.b.c.b ENSGT00970000193390.c.a.b.w.a ENSGT00940000158973.a.a ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Cyprinodontoidei DUPLICATION Cyprinodontoidei DUPLICATION Cyprinodontoidei DUPLICATION Cyprinodontoidei ANCESTRAL SPECIES 1 ENSGT00970000193390.c.a.b.w.a.e.b ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.w.b ENSGT00970000193390.c.a.b.w.a.f ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Poeciliinae DUPLICATION Poeciliinae ANCESTRAL SPECIES 5 ENSGT00940000163543.a ENSGT01020000230351.D.a.a.b ENSGT00940000163205.c ENSGT00770000121806.a ENSGT00970000193390.c.a.b.w.a.e.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a.a #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Poecilia ANCESTRAL SPECIES 35 ENSGT00940000163543.a ENSGT01020000230351.D.a.a.b ENSGT00940000163205.c ENSGT00770000121806.a ENSGT00970000193390.c.a.b.w.a.e.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a.a #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Guppy MODERN SPECIES 461 ENSPREG00000017086 ENSPREG00000017071 ENSPREG00000017045 ENSPREG00000017028 ENSPREG00000017019 ENSPREG00000017000 OARD1 (ENSPREG00000016941) ENSPREG00000016913 ENSPREG00000016846 ENSPREG00000016826 ENSPREG00000016816 ENSPREG00000016801 dapk1 (ENSPREG00000016685) ctsla (ENSPREG00000016624) #22 ENSPREG00000016197 #22 ENSPREG00000016121 #22 fbp2 (ENSPREG00000016101) fbp1a (ENSPREG00000016077) ENSPREG00000016036 ENSPREG00000016006 dmrt1 (ENSPREG00000014224) dmrt3a (ENSPREG00000014006) dmrt2a (ENSPREG00000013995) SMARCA2 (ENSPREG00000013800) adamts3 (ENSPREG00000013740) NPFFR2 (ENSPREG00000013707) slc4a4a (ENSPREG00000013576) ENSPREG00000013535 rufy3 (ENSPREG00000013424) grsf1 (ENSPREG00000013383) mapk1 (ENSPREG00000013354) NAME_6 ANCESTRAL SPECIES 268 ENSGT01020000230351.D.a.a.b ENSGT00940000163205.c.f ENSGT00940000163205.c.e ENSGT00770000121806.a ENSGT00970000193390.c.a.b.w.a.e.b.b.c.a ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a.a #22 Sailfin molly MODERN SPECIES 2389 dapk1 (ENSPLAG00000018814) ctsla (ENSPLAG00000018857) #22 ENSPLAG00000018872 #22 ENSPLAG00000019390 #22 ENSPLAG00000019519 #22 Platyfish MODERN SPECIES 3 ENSXMAG00000021307 GPR21 (ENSXMAG00000024344) p2rx7 (ENSXMAG00000016836) gstt1a (ENSXMAG00000016826) ENSXMAG00000028410 hs3st1l2 (ENSXMAG00000016817) ENSXMAG00000024259 purbb (ENSXMAG00000019625) ENSXMAG00000016812 ENSXMAG00000027821 CNNM4 (ENSXMAG00000016797) ENSXMAG00000016242 dapk1 (ENSXMAG00000015491) ENSXMAG00000015550 #22 ENSXMAG00000027399 #22 ENSXMAG00000024804 #22 fbp2 (ENSXMAG00000027530) ENSXMAG00000026310 fbp1a (ENSXMAG00000015568) ENSXMAG00000015579 ENSXMAG00000015585 dmrt1 (ENSXMAG00000015591) dmrt3a (ENSXMAG00000015600) dmrt2a (ENSXMAG00000015603) SMARCA2 (ENSXMAG00000015611) adamts3 (ENSXMAG00000002348) ENSXMAG00000023521 NPFFR2 (ENSXMAG00000002359) ENSXMAG00000026960 RUSC2 (ENSXMAG00000012784) ENSXMAG00000018126 Poeciliinae ANCESTRAL SPECIES ENSGT00940000153321.b.b.db.a.a.b #22 Platyfish MODERN SPECIES 3 ENSXMAG00000023602 ENSXMAG00000022236 ENSXMAG00000021307 GPR21 (ENSXMAG00000024344) p2rx7 (ENSXMAG00000016836) gstt1a (ENSXMAG00000016826) ENSXMAG00000028410 hs3st1l2 (ENSXMAG00000016817) ENSXMAG00000024259 purbb (ENSXMAG00000019625) ENSXMAG00000016812 ENSXMAG00000027821 CNNM4 (ENSXMAG00000016797) ENSXMAG00000016242 dapk1 (ENSXMAG00000015491) ENSXMAG00000015550 #22 ENSXMAG00000027399 #22 ENSXMAG00000024804 #22 fbp2 (ENSXMAG00000027530) ENSXMAG00000026310 fbp1a (ENSXMAG00000015568) ENSXMAG00000015579 ENSXMAG00000015585 dmrt1 (ENSXMAG00000015591) dmrt3a (ENSXMAG00000015600) dmrt2a (ENSXMAG00000015603) SMARCA2 (ENSXMAG00000015611) adamts3 (ENSXMAG00000002348) ENSXMAG00000023521 NPFFR2 (ENSXMAG00000002359) ENSXMAG00000026960 NAME_4 ANCESTRAL SPECIES ENSGT00940000153321.b.b.db.a.a #22 Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 739 ENSCVAG00000016587 ENSCVAG00000016571 dmrt2a (ENSCVAG00000016506) dmrt3a (ENSCVAG00000016490) dmrt1 (ENSCVAG00000016485) ENSCVAG00000016463 ENSCVAG00000016441 fbp1a (ENSCVAG00000016383) fbp2 (ENSCVAG00000016361) ENSCVAG00000016343 #22 ENSCVAG00000015915 #22 ENSCVAG00000015892 #22 ENSCVAG00000015870 ENSCVAG00000015858 fbxl18 (ENSCVAG00000015834) PTCD1 (ENSCVAG00000015826) ENSCVAG00000015819 Sheepshead minnow MODERN SPECIES 739 ENSCVAG00000015819 PTCD1 (ENSCVAG00000015826) fbxl18 (ENSCVAG00000015834) ENSCVAG00000015858 ENSCVAG00000015870 ENSCVAG00000015892 #22 ENSCVAG00000015915 #22 ENSCVAG00000016343 #22 fbp2 (ENSCVAG00000016361) fbp1a (ENSCVAG00000016383) ENSCVAG00000016441 ENSCVAG00000016463 dmrt1 (ENSCVAG00000016485) dmrt3a (ENSCVAG00000016490) dmrt2a (ENSCVAG00000016506) ENSCVAG00000016571 ENSCVAG00000016587 Cyprinodontoidei ANCESTRAL SPECIES 1 ENSGT00940000165623 ENSGT00970000193390.c.a.b.w.a.e.b ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.w.b ENSGT00970000193390.c.a.b.w.a.f ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h Poeciliinae ANCESTRAL SPECIES 5 ENSGT00940000154687.B.q.b ENSGT00940000163543.a ENSGT01020000230351.D.a.a.b ENSGT00940000163205.c ENSGT00770000121806.a ENSGT00970000193390.c.a.b.w.a.e.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a.a #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h Poecilia ANCESTRAL SPECIES 35 ENSGT00940000154687.B.q.b ENSGT00940000163543.a ENSGT01020000230351.D.a.a.b ENSGT00940000163205.c ENSGT00770000121806.a ENSGT00970000193390.c.a.b.w.a.e.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a.a #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h NAME_6 ANCESTRAL SPECIES 268 ENSGT00970000193390.c.a.b.w.a.e.b.b.d ENSGT01020000230351.D.a.a.b ENSGT00940000163205.c.f ENSGT00940000163205.c.e ENSGT00770000121806.a ENSGT00970000193390.c.a.b.w.a.e.b.b.c.a ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a.a #22 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 2389 dapk1 (ENSPLAG00000018814) ctsla (ENSPLAG00000018857) #22 ENSPLAG00000018872 #22 ENSPLAG00000019390 #22 ENSPLAG00000019519 #22 Sailfin molly MODERN SPECIES 2389 dapk1 (ENSPLAG00000018814) ctsla (ENSPLAG00000018857) #22 ENSPLAG00000018872 #22 ENSPLAG00000019390 #22 ENSPLAG00000019519 #22 Guppy MODERN SPECIES 461 ENSPREG00000017099 ENSPREG00000017086 ENSPREG00000017071 ENSPREG00000017045 ENSPREG00000017028 ENSPREG00000017019 ENSPREG00000017000 OARD1 (ENSPREG00000016941) ENSPREG00000016913 ENSPREG00000016846 ENSPREG00000016826 ENSPREG00000016816 ENSPREG00000016801 dapk1 (ENSPREG00000016685) ctsla (ENSPREG00000016624) #22 ENSPREG00000016197 #22 ENSPREG00000016121 #22 fbp2 (ENSPREG00000016101) fbp1a (ENSPREG00000016077) ENSPREG00000016036 ENSPREG00000016006 dmrt1 (ENSPREG00000014224) dmrt3a (ENSPREG00000014006) dmrt2a (ENSPREG00000013995) SMARCA2 (ENSPREG00000013800) adamts3 (ENSPREG00000013740) NPFFR2 (ENSPREG00000013707) slc4a4a (ENSPREG00000013576) ENSPREG00000013535 rufy3 (ENSPREG00000013424) grsf1 (ENSPREG00000013383) Platyfish MODERN SPECIES 3 ENSXMAG00000022236 ENSXMAG00000021307 GPR21 (ENSXMAG00000024344) p2rx7 (ENSXMAG00000016836) gstt1a (ENSXMAG00000016826) ENSXMAG00000028410 hs3st1l2 (ENSXMAG00000016817) ENSXMAG00000024259 purbb (ENSXMAG00000019625) ENSXMAG00000016812 ENSXMAG00000027821 CNNM4 (ENSXMAG00000016797) ENSXMAG00000016242 dapk1 (ENSXMAG00000015491) ENSXMAG00000015550 #22 ENSXMAG00000027399 #22 ENSXMAG00000024804 #22 fbp2 (ENSXMAG00000027530) ENSXMAG00000026310 fbp1a (ENSXMAG00000015568) ENSXMAG00000015579 ENSXMAG00000015585 dmrt1 (ENSXMAG00000015591) dmrt3a (ENSXMAG00000015600) dmrt2a (ENSXMAG00000015603) SMARCA2 (ENSXMAG00000015611) adamts3 (ENSXMAG00000002348) ENSXMAG00000023521 NPFFR2 (ENSXMAG00000002359) ENSXMAG00000026960 RUSC2 (ENSXMAG00000012784) NAME_4 ANCESTRAL SPECIES 108 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.w.b ENSGT00970000193390.c.a.b.w.a.f ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.b #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b Mummichog MODERN SPECIES 2436 hs3st1l2 (ENSFHEG00000022495) h2az2b (ENSFHEG00000022476) purbb (ENSFHEG00000022461) ENSFHEG00000022454 ENSFHEG00000022438 CNNM4 (ENSFHEG00000022406) ENSFHEG00000022331 dapk1 (ENSFHEG00000022183) ctsl (ENSFHEG00000022061) #22 ENSFHEG00000021852 #22 ENSFHEG00000021826 #22 fbp2 (ENSFHEG00000021794) fbp1a (ENSFHEG00000021762) ENSFHEG00000021710 ENSFHEG00000021541 dmrt1 (ENSFHEG00000021514) dmrt3a (ENSFHEG00000021315) dmrt2a (ENSFHEG00000021306) SMARCA2 (ENSFHEG00000021250) Sheepshead minnow MODERN SPECIES 984 ENSCVAG00000013507 ENSCVAG00000013516 CNNM4 (ENSCVAG00000013546) ENSCVAG00000013589 ENSCVAG00000013601 dapk1 (ENSCVAG00000013708) ctsla (ENSCVAG00000013743) #22 ENSCVAG00000013756 ENSCVAG00000014365 #22 Cyprinodontoidei ANCESTRAL SPECIES 202 ENSGT00940000153321.b.b.db.b #22 ENSGT00390000015513.a.a.b.c.b NAME_4 ANCESTRAL SPECIES 108 ENSGT00940000165623 ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.w.b ENSGT00970000193390.c.a.b.w.a.f ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.b #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b Mummichog MODERN SPECIES 2436 hs3st1l2 (ENSFHEG00000022495) h2az2b (ENSFHEG00000022476) purbb (ENSFHEG00000022461) ENSFHEG00000022454 ENSFHEG00000022438 CNNM4 (ENSFHEG00000022406) ENSFHEG00000022331 dapk1 (ENSFHEG00000022183) ctsl (ENSFHEG00000022061) #22 ENSFHEG00000021852 #22 ENSFHEG00000021826 #22 fbp2 (ENSFHEG00000021794) fbp1a (ENSFHEG00000021762) ENSFHEG00000021710 ENSFHEG00000021541 dmrt1 (ENSFHEG00000021514) dmrt3a (ENSFHEG00000021315) dmrt2a (ENSFHEG00000021306) SMARCA2 (ENSFHEG00000021250) Sheepshead minnow MODERN SPECIES 739 ENSCVAG00000015819 PTCD1 (ENSCVAG00000015826) fbxl18 (ENSCVAG00000015834) ENSCVAG00000015858 ENSCVAG00000015870 ENSCVAG00000015892 #22 ENSCVAG00000015915 #22 ENSCVAG00000016343 #22 fbp2 (ENSCVAG00000016361) fbp1a (ENSCVAG00000016383) ENSCVAG00000016441 ENSCVAG00000016463 dmrt1 (ENSCVAG00000016485) dmrt3a (ENSCVAG00000016490) dmrt2a (ENSCVAG00000016506) ENSCVAG00000016571 ENSCVAG00000016587 Cyprinodontoidei ANCESTRAL SPECIES 1 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b.w.a.e.b ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.w.b ENSGT00970000193390.c.a.b.w.a.f ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 Poeciliinae ANCESTRAL SPECIES 5 ENSGT00970000193390.c.a.b.w.a.e.a ENSGT00940000154687.B.q.b ENSGT00940000163543.a ENSGT01020000230351.D.a.a.b ENSGT00940000163205.c ENSGT00770000121806.a ENSGT00970000193390.c.a.b.w.a.e.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a.a #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 Poecilia ANCESTRAL SPECIES 35 ENSGT00970000193390.c.a.b.w.a.e.a ENSGT00940000154687.B.q.b ENSGT00940000163543.a ENSGT01020000230351.D.a.a.b ENSGT00940000163205.c ENSGT00770000121806.a ENSGT00970000193390.c.a.b.w.a.e.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a.a #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 NAME_6 ANCESTRAL SPECIES 268 ENSGT00940000163543.a ENSGT00970000193390.c.a.b.w.a.e.b.b.d ENSGT01020000230351.D.a.a.b ENSGT00940000163205.c.f ENSGT00940000163205.c.e ENSGT00770000121806.a ENSGT00970000193390.c.a.b.w.a.e.b.b.c.a ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.a.a.a #22 Sailfin molly MODERN SPECIES 2389 dapk1 (ENSPLAG00000018814) ctsla (ENSPLAG00000018857) #22 ENSPLAG00000018872 #22 ENSPLAG00000019390 #22 ENSPLAG00000019519 #22 Amazon molly MODERN SPECIES 636 ENSPFOG00000020759 ENSPFOG00000020782 p2rx7 (ENSPFOG00000007827) gstt1a (ENSPFOG00000022992) gstt1a (ENSPFOG00000007763) ENSPFOG00000023860 ENSPFOG00000020758 hs3st1l2 (ENSPFOG00000007721) h2az2a (ENSPFOG00000007683) PURB (ENSPFOG00000020757) ckap2l (ENSPFOG00000007680) ENSPFOG00000007628 CNNM4 (ENSPFOG00000007463) ENSPFOG00000006659 dapk1 (ENSPFOG00000006057) ctsla (ENSPFOG00000005874) #22 Guppy MODERN SPECIES 461 ENSPREG00000017114 ENSPREG00000017099 ENSPREG00000017086 ENSPREG00000017071 ENSPREG00000017045 ENSPREG00000017028 ENSPREG00000017019 ENSPREG00000017000 OARD1 (ENSPREG00000016941) ENSPREG00000016913 ENSPREG00000016846 ENSPREG00000016826 ENSPREG00000016816 ENSPREG00000016801 dapk1 (ENSPREG00000016685) ctsla (ENSPREG00000016624) #22 ENSPREG00000016197 #22 ENSPREG00000016121 #22 fbp2 (ENSPREG00000016101) fbp1a (ENSPREG00000016077) ENSPREG00000016036 ENSPREG00000016006 dmrt1 (ENSPREG00000014224) dmrt3a (ENSPREG00000014006) dmrt2a (ENSPREG00000013995) SMARCA2 (ENSPREG00000013800) adamts3 (ENSPREG00000013740) NPFFR2 (ENSPREG00000013707) slc4a4a (ENSPREG00000013576) ENSPREG00000013535 rufy3 (ENSPREG00000013424) NAME_4 ANCESTRAL SPECIES 108 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.w.b ENSGT00970000193390.c.a.b.w.a.f ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb #22 ENSGT00940000153321.b.b.db.a.b #22 ENSGT00940000153321.b.b.db.b #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b Sheepshead minnow MODERN SPECIES 984 ENSCVAG00000013507 ENSCVAG00000013516 CNNM4 (ENSCVAG00000013546) ENSCVAG00000013589 ENSCVAG00000013601 dapk1 (ENSCVAG00000013708) ctsla (ENSCVAG00000013743) #22 ENSCVAG00000013756 ENSCVAG00000014365 #22 Mummichog MODERN SPECIES 2436 hs3st1l2 (ENSFHEG00000022495) h2az2b (ENSFHEG00000022476) purbb (ENSFHEG00000022461) ENSFHEG00000022454 ENSFHEG00000022438 CNNM4 (ENSFHEG00000022406) ENSFHEG00000022331 dapk1 (ENSFHEG00000022183) ctsl (ENSFHEG00000022061) #22 ENSFHEG00000021852 #22 ENSFHEG00000021826 #22 fbp2 (ENSFHEG00000021794) fbp1a (ENSFHEG00000021762) ENSFHEG00000021710 ENSFHEG00000021541 dmrt1 (ENSFHEG00000021514) dmrt3a (ENSFHEG00000021315) dmrt2a (ENSFHEG00000021306) SMARCA2 (ENSFHEG00000021250) Aplocheiloidei ANCESTRAL SPECIES 45 ENSGT00940000164100.A.c.b.b.e.a.b ENSGT01100000263483.D.d.a.a.a.a.f.a.a.a ENSGT00950000182960.a.b ENSGT01100000263483.D.d.a.a.a.a.f.b.b ENSGT00940000166999.A ENSGT00940000169174 ENSGT00940000154842.a.a ENSGT00940000154779.a.b.b ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786 ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a Mangrove rivulus DUPLICATION Mangrove rivulus MODERN SPECIES 189 ENSKMAG00000010663 ENSKMAG00000010591 ENSKMAG00000010545 sncaip (ENSKMAG00000010522) ENSKMAG00000010501 ENSKMAG00000010488 ENSKMAG00000010469 SNX2 (ENSKMAG00000010366) PPIC (ENSKMAG00000010312) ENSKMAG00000010300 ENSKMAG00000010293 PRDM6 (ENSKMAG00000010266) CEP120 (ENSKMAG00000010232) ZNF608 (ENSKMAG00000010192) dapk1 (ENSKMAG00000010088) ctsla (ENSKMAG00000010046) #22 ENSKMAG00000010024 #22 fbp2 (ENSKMAG00000009992) fbp1a (ENSKMAG00000009967) ENSKMAG00000009918 ENSKMAG00000009897 dmrt1 (ENSKMAG00000009879) Mangrove rivulus MODERN SPECIES 189 ENSKMAG00000010591 ENSKMAG00000010545 sncaip (ENSKMAG00000010522) ENSKMAG00000010501 ENSKMAG00000010488 ENSKMAG00000010469 SNX2 (ENSKMAG00000010366) PPIC (ENSKMAG00000010312) ENSKMAG00000010300 ENSKMAG00000010293 PRDM6 (ENSKMAG00000010266) CEP120 (ENSKMAG00000010232) ZNF608 (ENSKMAG00000010192) dapk1 (ENSKMAG00000010088) ctsla (ENSKMAG00000010046) #22 ENSKMAG00000010024 #22 fbp2 (ENSKMAG00000009992) fbp1a (ENSKMAG00000009967) ENSKMAG00000009918 ENSKMAG00000009897 dmrt1 (ENSKMAG00000009879) Turquoise killifish DUPLICATION Turquoise killifish MODERN SPECIES 1620 ENSNFUG00015006513 ENSNFUG00015006522 ENSNFUG00015006525 ENSNFUG00015006529 ENSNFUG00015006542 ENSNFUG00015006586 ENSNFUG00015006598 sncaip (ENSNFUG00015006683) SNX2 (ENSNFUG00015006715) PPIC (ENSNFUG00015006861) PRDM6 (ENSNFUG00015006869) ENSNFUG00015006882 ENSNFUG00015006886 ZNF608 (ENSNFUG00015007020) DAPK1 (ENSNFUG00015007056) CTSL (ENSNFUG00015007120) #22 ENSNFUG00015007122 #22 fbp2 (ENSNFUG00015007130) FBP1A (ENSNFUG00015007144) ENSNFUG00015007226 ENSNFUG00015007236 dmrt1 (ENSNFUG00015007243) ENSNFUG00015007248 dmrt3a (ENSNFUG00015007255) dmrt2a (ENSNFUG00015007267) SMARCA2 (ENSNFUG00015007311) adamts3 (ENSNFUG00015007581) NPFFR2.1 (ENSNFUG00015009382) slc4a4a (ENSNFUG00015009614) SLC39A14 (ENSNFUG00015012480) stambpb (ENSNFUG00015012485) Turquoise killifish MODERN SPECIES 1620 ENSNFUG00015006522 ENSNFUG00015006525 ENSNFUG00015006529 ENSNFUG00015006542 ENSNFUG00015006586 ENSNFUG00015006598 sncaip (ENSNFUG00015006683) SNX2 (ENSNFUG00015006715) PPIC (ENSNFUG00015006861) PRDM6 (ENSNFUG00015006869) ENSNFUG00015006882 ENSNFUG00015006886 ZNF608 (ENSNFUG00015007020) DAPK1 (ENSNFUG00015007056) CTSL (ENSNFUG00015007120) #22 ENSNFUG00015007122 #22 fbp2 (ENSNFUG00015007130) FBP1A (ENSNFUG00015007144) ENSNFUG00015007226 ENSNFUG00015007236 dmrt1 (ENSNFUG00015007243) ENSNFUG00015007248 dmrt3a (ENSNFUG00015007255) dmrt2a (ENSNFUG00015007267) SMARCA2 (ENSNFUG00015007311) adamts3 (ENSNFUG00015007581) NPFFR2.1 (ENSNFUG00015009382) slc4a4a (ENSNFUG00015009614) SLC39A14 (ENSNFUG00015012480) stambpb (ENSNFUG00015012485) PPIL2 (ENSNFUG00015012545) Ovalentaria_B ANCESTRAL SPECIES 27 ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Pomacentridae ANCESTRAL SPECIES 26 ENSGT00390000008206 ENSGT00940000154043.A.j.a ENSGT00940000163579 ENSGT00940000164473 ENSGT00940000162727.a.a ENSGT00940000156880.c.b ENSGT00940000169810 ENSGT00950000182975.a.a.b.k ENSGT00390000014658 ENSGT00940000157157.b.a.a ENSGT00940000163149.a.b.c.b ENSGT00940000158199 ENSGT00940000156724 ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Pomacentridae_A ANCESTRAL SPECIES 34 ENSGT00390000008206 ENSGT00940000154043.A.j.a ENSGT00940000163579 ENSGT00940000164473 ENSGT00940000162727.a.a ENSGT00940000156880.c.b ENSGT00940000169810 ENSGT00950000182975.a.a.b.k ENSGT00390000014658 ENSGT00940000157157.b.a.a ENSGT00940000163149.a.b.c.b ENSGT00940000158199 ENSGT00940000156724 ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010.b Amphiprion ANCESTRAL SPECIES 20 ENSGT00940000160711 ENSGT00390000008206 ENSGT00940000154043.A.j.a ENSGT00940000163579 ENSGT00940000164473 ENSGT00940000162727.a.a ENSGT00940000156880.c.b ENSGT00950000182975.a.a.b.k ENSGT00390000014658 ENSGT00940000157157.b.a.a ENSGT00940000163149.a.b.c.b ENSGT00940000158199 ENSGT00940000156724 ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000154673.a.d.a.c.b Clown anemonefish MODERN SPECIES 1093 dapk1 (ENSAOCG00000006264) ctsla (ENSAOCG00000006287) #22 fbp2 (ENSAOCG00000006296) fbp1a (ENSAOCG00000006322) ENSAOCG00000006340 Orange clownfish MODERN SPECIES 19 hscb (ENSAPEG00000010132) LRRC8A (ENSAPEG00000010120) ppil3 (ENSAPEG00000010102) zgc:101858 (ENSAPEG00000010085) col27a1b (ENSAPEG00000009998) ENSAPEG00000009950 KCNT1 (ENSAPEG00000009839) camsap1b (ENSAPEG00000009768) ubac1 (ENSAPEG00000009753) notch1b (ENSAPEG00000009619) ENSAPEG00000009592 inpp5e (ENSAPEG00000009581) pmpca (ENSAPEG00000009521) ENSAPEG00000009471 dapk1 (ENSAPEG00000009387) ctsla (ENSAPEG00000009352) #22 fbp2 (ENSAPEG00000009338) fbp1a (ENSAPEG00000009304) ENSAPEG00000009278 cfap157 (ENSAPEG00000009240) dmrt1 (ENSAPEG00000008009) dmrt3a (ENSAPEG00000007838) dmrt2a (ENSAPEG00000007763) SMARCA2 (ENSAPEG00000007646) adamts3 (ENSAPEG00000007558) NPFFR2 (ENSAPEG00000007470) slc4a4a (ENSAPEG00000007369) rufy3 (ENSAPEG00000007268) ENSAPEG00000007240 ENSAPEG00000007234 ENSAPEG00000007229 Spiny chromis MODERN SPECIES 212 fgfr4 (ENSAPOG00000002040) ENSAPOG00000002072 rab24 (ENSAPOG00000002097) pgrmc1 (ENSAPOG00000002116) cox7b (ENSAPOG00000002123) pgk1 (ENSAPOG00000000699) kctd7 (ENSAPOG00000002181) KCNJ6 (ENSAPOG00000002197) rabgef1 (ENSAPOG00000002214) ENSAPOG00000002257 ENSAPOG00000000776 dapk1 (ENSAPOG00000002327) ctsla (ENSAPOG00000002348) #22 fbp2 (ENSAPOG00000002366) fbp1a (ENSAPOG00000002388) ENSAPOG00000002404 cfap157 (ENSAPOG00000002431) dmrt1 (ENSAPOG00000002453) dmrt3a (ENSAPOG00000002470) dmrt2a (ENSAPOG00000002533) SMARCA2 (ENSAPOG00000002641) adamts3 (ENSAPOG00000002707) Bicolor damselfish MODERN SPECIES 307 ENSSPAG00000006819 ENSSPAG00000006787 ENSSPAG00000006768 KCNT1 (ENSSPAG00000006576) camsap1b (ENSSPAG00000006479) ubac1 (ENSSPAG00000006461) notch1b (ENSSPAG00000006379) ENSSPAG00000006225 inpp5e (ENSSPAG00000006192) pmpca (ENSSPAG00000006160) ENSSPAG00000006126 dapk1 (ENSSPAG00000005994) ctsla (ENSSPAG00000005961) #22 fbp2 (ENSSPAG00000005949) fbp1a (ENSSPAG00000005930) ENSSPAG00000005878 cfap157 (ENSSPAG00000005851) dmrt1 (ENSSPAG00000005837) dmrt3a (ENSSPAG00000005816) dmrt2a (ENSSPAG00000005753) ENSSPAG00000005741 Cichlidae ANCESTRAL SPECIES 6 ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Midas cichlid MODERN SPECIES 894 ENSACIG00000006945 ENSACIG00000006849 ENSACIG00000006834 sh2d3cb (ENSACIG00000006797) tor2a (ENSACIG00000006771) ptrh1 (ENSACIG00000006734) ENSACIG00000006725 ENSACIG00000006716 ENSACIG00000006712 ENSACIG00000006677 dapk1 (ENSACIG00000006618) ctsla (ENSACIG00000006601) #22 fbp2 (ENSACIG00000006283) fbp1a (ENSACIG00000006262) Pseudocrenilabrinae ANCESTRAL SPECIES 11 ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Nile tilapia MODERN SPECIES 3 ENSONIG00000034620 ENSONIG00000006674 ENSONIG00000020396 ENSONIG00000036199 ENSONIG00000034054 ENSONIG00000028403 ENSONIG00000012313 ACTB (ENSONIG00000014259) ENSONIG00000032674 ENSONIG00000034815 zgc:113274 (ENSONIG00000032281) ENSONIG00000027235 ENSONIG00000035872 ENSONIG00000042907 dapk1 (ENSONIG00000014229) ctsla (ENSONIG00000014226) #22 fbp1a (ENSONIG00000014217) ENSONIG00000014211 ENSONIG00000036306 cfap157 (ENSONIG00000014207) dmrt1 (ENSONIG00000014201) dmrt3a (ENSONIG00000030065) dmrt2 (ENSONIG00000014197) SMARCA2 (ENSONIG00000014163) adamts3 (ENSONIG00000014157) NPFFR2 (ENSONIG00000014155) slc4a4a (ENSONIG00000014129) rufy3 (ENSONIG00000014125) ENSONIG00000035387 grsf1 (ENSONIG00000014119) mapk1 (ENSONIG00000031950) Pseudocrenilabrinae_A ANCESTRAL SPECIES 8 ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Lyretail cichlid MODERN SPECIES 611 ENSNBRG00000003452 ENSNBRG00000003444 ENSNBRG00000003426 ctsla (ENSNBRG00000003388) #22 fbp2 (ENSNBRG00000003354) fbp1a (ENSNBRG00000003081) ENSNBRG00000003061 ENSNBRG00000003039 ENSNBRG00000003020 Haplochromini ANCESTRAL SPECIES 4 ENSGT00940000163484.t.b.b.a.b.a.d.c.a ENSGT01100000263483.D.c.b.a.b.d ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT01100000263538.A.b.h.b.b.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h Burton s mouthbrooder MODERN SPECIES 1944 ENSHBUG00000000773 #22 Haplochromini_A ANCESTRAL SPECIES 4 ENSGT00940000163484.t.b.b.a.b.a.d.c.a ENSGT01100000263483.D.c.b.a.b.d ENSGT00940000153424.a.b.j ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT01100000263538.A.b.h.b.b.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h Haplochromini_B ANCESTRAL SPECIES 2 ENSGT00940000163484.t.b.b.a.b.a.d.c.a ENSGT01100000263483.D.c.b.a.b.d ENSGT00940000153424.a.b.j ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT01100000263538.A.b.h.b.b.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Zebra mbuna MODERN SPECIES 1094 FIBCD1 (ENSMZEG00005020848) ENSMZEG00005020837 cmlc1 (ENSMZEG00005020829) ENSMZEG00005020823 endog (ENSMZEG00005020825) NTNG2 (ENSMZEG00005020820) med27 (ENSMZEG00005020816) FNBP1 (ENSMZEG00005020812) ENSMZEG00005020808 OLFM1 (ENSMZEG00005020805) ENSMZEG00005020801 ENSMZEG00005020799 ENSMZEG00005020796 ENSMZEG00005020792 dapk1 (ENSMZEG00005020786) ctsla (ENSMZEG00005020780) #22 fbp2 (ENSMZEG00005020775) fbp1a (ENSMZEG00005020768) ENSMZEG00005020765 ENSMZEG00005020762 cfap157 (ENSMZEG00005020758) dmrt1 (ENSMZEG00005020750) dmrt3a (ENSMZEG00005020744) dmrt2a (ENSMZEG00005020738) SMARCA2 (ENSMZEG00005020709) adamts3 (ENSMZEG00005020688) NPFFR2 (ENSMZEG00005020684) slc4a4a (ENSMZEG00005020663) rufy3 (ENSMZEG00005020641) ENSMZEG00005020633 mapk1 (ENSMZEG00005020626) Eastern happy MODERN SPECIES 3 ENSACLG00000005264 ENSACLG00000005232 ENSACLG00000005220 ENSACLG00000005175 ENSACLG00000005094 ENSACLG00000005080 ENSACLG00000005066 ENSACLG00000005063 ENSACLG00000005057 ENSACLG00000005052 ENSACLG00000005015 ENSACLG00000005005 ENSACLG00000004981 ENSACLG00000004980 dapk1 (ENSACLG00000004772) ctsla (ENSACLG00000004751) #22 fbp2 (ENSACLG00000004707) fbp1a (ENSACLG00000004679) ENSACLG00000004550 ENSACLG00000004543 ENSACLG00000004527 cfap157 (ENSACLG00000004474) dmrt1 (ENSACLG00000004443) dmrt3a (ENSACLG00000004334) dmrt2a (ENSACLG00000004324) SMARCA2 (ENSACLG00000004248) adamts3 (ENSACLG00000003995) NPFFR2 (ENSACLG00000003977) slc4a4a (ENSACLG00000003770) rufy3 (ENSACLG00000003721) ENSACLG00000003685 P. nyererei MODERN SPECIES 333 dapk1 (ENSPNYG00000003754) ctsla (ENSPNYG00000003827) #22 fbp2 (ENSPNYG00000003871) ENSPNYG00000003901 ENSPNYG00000003913 ENSPNYG00000003931 ENSPNYG00000003971 cfap157 (ENSPNYG00000003983) dmrt1 (ENSPNYG00000004057) dmrt3a (ENSPNYG00000004331) dmrt2a (ENSPNYG00000004377) SMARCA2 (ENSPNYG00000004533) adamts3 (ENSPNYG00000005116) NPFFR2 (ENSPNYG00000005226) slc4a4a (ENSPNYG00000005284) rufy3 (ENSPNYG00000005345) grsf1 (ENSPNYG00000005379) Percomorphaceae_C ANCESTRAL SPECIES 7 ENSGT00390000001654 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 Eupercaria ANCESTRAL SPECIES 5 ENSGT00390000001654 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Tetraodontidae ANCESTRAL SPECIES 12 ENSGT00390000017751 ENSGT00940000154006.a ENSGT00390000001654 ENSGT00940000158390 ENSGT00940000165623 ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 ENSTNIG00000002336 ENSTNIG00000015562 ENSTNIG00000002334 ENSTNIG00000001970 ENSTNIG00000002333 ndfip2 (ENSTNIG00000002332) ENSTNIG00000002331 ENSTNIG00000002330 ENSTNIG00000002329 ENSTNIG00000000251 ENSTNIG00000002326 cldnd1a (ENSTNIG00000002325) ENSTNIG00000000668 rgma (ENSTNIG00000000195) ENSTNIG00000002322 ctsla (ENSTNIG00000015635) #22 ENSTNIG00000002320 ENSTNIG00000002319 ENSTNIG00000002317 ENSTNIG00000000415 ENSTNIG00000001479 bves (ENSTNIG00000002316) ENSTNIG00000002314 lgalsla (ENSTNIG00000002312) ENSTNIG00000002311 ENSTNIG00000002310 ENSTNIG00000002309 zgc:110540 (ENSTNIG00000002308) ENSTNIG00000002307 ENSTNIG00000002306 ENSTNIG00000002304 Tetraodon MODERN SPECIES 3 ENSTNIG00000015622 ZNRF3 (ENSTNIG00000015623) coq5 (ENSTNIG00000015624) kremen1 (ENSTNIG00000015625) si:dkey-174n20.1 (ENSTNIG00000015626) camk2b1 (ENSTNIG00000015627) ENSTNIG00000015628 hs3st1l2 (ENSTNIG00000001497) h2az2b (ENSTNIG00000015629) purbb (ENSTNIG00000015630) ENSTNIG00000015631 il1b (ENSTNIG00000001101) CNNM4 (ENSTNIG00000015632) ENSTNIG00000015633 dapk1 (ENSTNIG00000015634) ctsla (ENSTNIG00000002321) #22 fbp2 (ENSTNIG00000015636) fbp1a (ENSTNIG00000015637) ENSTNIG00000015638 ENSTNIG00000015639 dmrt1 (ENSTNIG00000015640) dmrt3a (ENSTNIG00000015641) dmrt2a (ENSTNIG00000015642) ENSTNIG00000001666 ENSTNIG00000005521 ENSTNIG00000015346 NPFFR2 (ENSTNIG00000015347) slc4a4a (ENSTNIG00000015348) rufy3 (ENSTNIG00000015349) ENSTNIG00000015350 mapk1 (ENSTNIG00000015351) Fugu MODERN SPECIES 13 xbp1 (ENSTRUG00000016185) znrf3 (ENSTRUG00000016163) coq5 (ENSTRUG00000016150) kremen1 (ENSTRUG00000016139) si:dkey-174n20.1 (ENSTRUG00000016123) camk2b1 (ENSTRUG00000016081) ENSTRUG00000022350 hs3st1l2 (ENSTRUG00000025059) h2az2a (ENSTRUG00000020974) PURB (ENSTRUG00000025235) ckap2l (ENSTRUG00000019615) il1b (ENSTRUG00000016002) cnnm4 (ENSTRUG00000015973) ENSTRUG00000015919 dapk1 (ENSTRUG00000015844) ctsla (ENSTRUG00000015823) #22 fbp2 (ENSTRUG00000015799) fbp1a (ENSTRUG00000018578) ENSTRUG00000015725 ENSTRUG00000015719 dmrt1 (ENSTRUG00000015699) dmrt3a (ENSTRUG00000015692) dmrt2 (ENSTRUG00000015666) SMARCA2 (ENSTRUG00000015619) adamts3 (ENSTRUG00000015613) vsig8b (ENSTRUG00000015572) npffr2 (ENSTRUG00000015587) slc4a4a (ENSTRUG00000015446) rufy3 (ENSTRUG00000015381) grsf1 (ENSTRUG00000015354) mapk1 (ENSTRUG00000015300) Eupecaria_A ANCESTRAL SPECIES 6 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00950000183387 ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Ballan wrasse MODERN SPECIES 396 ENSLBEG00000012999 ENSLBEG00000012969 CNNM4 (ENSLBEG00000012919) ENSLBEG00000012832 dapk1 (ENSLBEG00000012745) ENSLBEG00000012719 ctsla (ENSLBEG00000012701) #22 fbp2 (ENSLBEG00000012663) fbp1a (ENSLBEG00000012633) ENSLBEG00000012596 cfap157 (ENSLBEG00000012578) dmrt1 (ENSLBEG00000012548) dmrt3a (ENSLBEG00000012531) dmrt2a (ENSLBEG00000012522) ENSLBEG00000012509 Eupecaria_B ANCESTRAL SPECIES 6 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b.j ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00950000183387 ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Eupecaria_C ANCESTRAL SPECIES 3 ENSGT00390000001654 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b.j ENSGT00950000182924.A.b.b ENSGT00940000158973.a.a ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Eupercaria_incertae_sedis ANCESTRAL SPECIES 9 ENSGT00940000154006.a ENSGT00390000001654 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.j ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 European seabass MODERN SPECIES 13 coq5 (ENSDLAG00005033930) ENSDLAG00005019836 si:dkey-174n20.1 (ENSDLAG00005034035) ENSDLAG00005031525 ENSDLAG00005021272 ENSDLAG00005030202 ENSDLAG00005029947 ENSDLAG00005032276 ENSDLAG00005030737 IL-1b (ENSDLAG00005021347) ENSDLAG00005021355 ENSDLAG00005034072 ENSDLAG00005034869 ENSDLAG00005021399 dapk1 (ENSDLAG00005021615) ctsla (ENSDLAG00005022121) #22 fbp2 (ENSDLAG00005022159) ENSDLAG00005022171 ENSDLAG00005022193 dmrt1 (ENSDLAG00005022195) dmrt3a (ENSDLAG00005022199) dmrt2a (ENSDLAG00005022201) SMARCA2 (ENSDLAG00005022224) adamts3 (ENSDLAG00005022631) ENSDLAG00005023030 slc4a4a (ENSDLAG00005023146) ENSDLAG00005024580 ENSDLAG00005024826 ENSDLAG00005026946 ENSDLAG00005024830 ENSDLAG00005026868 Large yellow croaker MODERN SPECIES 2 cyp1b1 (ENSLCRG00005005223) nanp (ENSLCRG00005005224) polr1b (ENSLCRG00005005227) ENSLCRG00005005238 sec14l8 (ENSLCRG00005005310) ENSLCRG00005005313 ascc2 (ENSLCRG00005005314) slc39a14 (ENSLCRG00005005316) stambpb (ENSLCRG00005005319) ENSLCRG00005005325 ppil2 (ENSLCRG00005005335) YPEL2 (ENSLCRG00005006863) mapk1 (ENSLCRG00005006870) ENSLCRG00005007054 dapk1 (ENSLCRG00005009482) ctsla (ENSLCRG00005010572) #22 fbp2 (ENSLCRG00005010576) fbp1a (ENSLCRG00005010577) ENSLCRG00005010582 cfap157 (ENSLCRG00005010610) dmrt3a (ENSLCRG00005010611) dmrt1 (ENSLCRG00005010615) piwil2 (ENSLCRG00005010783) ENSLCRG00005014668 atad1a (ENSLCRG00005014669) GALNT9 (ENSLCRG00005014674) FBRSL1 (ENSLCRG00005014685) ENSLCRG00005014863 chfr (ENSLCRG00005014864) ENSLCRG00005014894 ankle2 (ENSLCRG00005016149) Gilthead seabream MODERN SPECIES 19 ENSSAUG00010020253 camk2b1 (ENSSAUG00010019612) ENSSAUG00010019606 ENSSAUG00010019605 ENSSAUG00010019604 hs3st1l2 (ENSSAUG00010019601) h2az2a (ENSSAUG00010019597) PURB (ENSSAUG00010019595) ENSSAUG00010019592 ckap2l (ENSSAUG00010019586) IL-1b (ENSSAUG00010019583) CNNM4 (ENSSAUG00010019578) ENSSAUG00010019574 ENSSAUG00010018389 dapk1 (ENSSAUG00010016634) ctsla (ENSSAUG00010016582) #22 fbp2 (ENSSAUG00010016575) ENSSAUG00010016568 ENSSAUG00010016563 dmrt1 (ENSSAUG00010016549) ENSSAUG00010016546 dmrt3a (ENSSAUG00010016544) dmrt2a (ENSSAUG00010016541) SMARCA2 (ENSSAUG00010016520) adamts3 (ENSSAUG00010013279) NPFFR2 (ENSSAUG00010013253) slc4a4a (ENSSAUG00010006520) rufy3 (ENSSAUG00010005056) grsf1 (ENSSAUG00010005052) ENSSAUG00010005051 mapk1 (ENSSAUG00010005040) Perciformes ANCESTRAL SPECIES 6 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b.j ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00950000183387 ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Cottioidei ANCESTRAL SPECIES 27 ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Lumpfish MODERN SPECIES 24 ckap2l (ENSCLMG00005010720) ENSCLMG00005010719 CNNM4 (ENSCLMG00005010717) ENSCLMG00005005384 ENSCLMG00005005335 ENSCLMG00005005334 ENSCLMG00005005332 ENSCLMG00005005331 ENSCLMG00005005330 ENSCLMG00005005328 ENSCLMG00005005326 ENSCLMG00005005325 ENSCLMG00005005324 ENSCLMG00005005323 dapk1 (ENSCLMG00005004736) ctsla (ENSCLMG00005004564) #22 fbp2 (ENSCLMG00005004548) fbp1a (ENSCLMG00005004530) ENSCLMG00005004492 ENSCLMG00005004473 ENSCLMG00005004453 dmrt1 (ENSCLMG00005004315) dmrt3a (ENSCLMG00005004276) dmrt2a (ENSCLMG00005004262) SMARCA2 (ENSCLMG00005004251) ENSCLMG00005004246 adamts3 (ENSCLMG00005019879) ENSCLMG00005019875 NPFFR2 (ENSCLMG00005019873) slc4a4a (ENSCLMG00005015840) rufy3 (ENSCLMG00005015792) Stickleback MODERN SPECIES 12 ENSGACG00000014647 ENSGACG00000014642 ENSGACG00000014639 ENSGACG00000014638 ENSGACG00000014636 ENSGACG00000014629 ENSGACG00000014628 hs3st1l2 (ENSGACG00000014626) h2az2a (ENSGACG00000014618) PURB (ENSGACG00000014617) ENSGACG00000014611 ENSGACG00000014609 CNNM4 (ENSGACG00000014606) ENSGACG00000014599 dapk1 (ENSGACG00000014591) ctsla (ENSGACG00000014571) #22 fbp2 (ENSGACG00000014527) ENSGACG00000014520 ENSGACG00000014517 dmrt1 (ENSGACG00000014514) dmrt3a (ENSGACG00000014511) dmrt2a (ENSGACG00000014508) SMARCA2 (ENSGACG00000014488) adamts3 (ENSGACG00000014484) NPFFR2 (ENSGACG00000014481) slc4a4a (ENSGACG00000014471) rufy3 (ENSGACG00000014452) grsf1 (ENSGACG00000014447) mapk1 (ENSGACG00000014421) ppil2 (ENSGACG00000014408) stambpb (ENSGACG00000014405) Perciformes_a ANCESTRAL SPECIES 4 ENSGT00390000001654 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b.j.a.a ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Channel bull blenny MODERN SPECIES 23 ENSCGOG00000024689 ENSCGOG00000024686 ENSCGOG00000024685 ENSCGOG00000024683 ENSCGOG00000024643 sec14l8 (ENSCGOG00000024564) ENSCGOG00000024557 ascc2 (ENSCGOG00000024552) slc39a14 (ENSCGOG00000024551) stambpb (ENSCGOG00000024548) ppil2 (ENSCGOG00000024513) ENSCGOG00000024494 mapk1 (ENSCGOG00000024475) ENSCGOG00000024420 dapk1 (ENSCGOG00000024374) ctsla (ENSCGOG00000024322) #22 fbp2 (ENSCGOG00000024316) fbp1a (ENSCGOG00000024315) ENSCGOG00000024313 ENSCGOG00000024311 cfap157 (ENSCGOG00000024309) dmrt1 (ENSCGOG00000024307) dmrt3a (ENSCGOG00000024306) dmrt2a (ENSCGOG00000024304) SMARCA2 (ENSCGOG00000023171) ENSCGOG00000023030 adamts3 (ENSCGOG00000022962) NPFFR2 (ENSCGOG00000022960) slc4a4a (ENSCGOG00000020741) rufy3 (ENSCGOG00000020602) ENSCGOG00000020594 Pike perch MODERN SPECIES 2 kremen1 (ENSSLUG00000023295) SUSD2 (ENSSLUG00000023286) si:dkey-174n20.1 (ENSSLUG00000023282) camk2b1 (ENSSLUG00000022390) ENSSLUG00000022307 ENSSLUG00000022298 hs3st1l2 (ENSSLUG00000022294) h2az2a (ENSSLUG00000022278) purbb (ENSSLUG00000022268) ckap2l (ENSSLUG00000022264) ENSSLUG00000022262 CNNM4 (ENSSLUG00000022254) ENSSLUG00000022252 ENSSLUG00000021851 dapk1 (ENSSLUG00000020591) ctsla (ENSSLUG00000020469) #22 fbp2 (ENSSLUG00000020461) fbp1a (ENSSLUG00000020452) ENSSLUG00000020449 ENSSLUG00000020447 cfap157 (ENSSLUG00000020444) dmrt1 (ENSSLUG00000020433) dmrt3a (ENSSLUG00000020427) dmrt2a (ENSSLUG00000020423) SMARCA2 (ENSSLUG00000020089) adamts3 (ENSSLUG00000020050) NPFFR2 (ENSSLUG00000020045) slc4a4a (ENSSLUG00000017011) rufy3 (ENSSLUG00000016630) grsf1 (ENSSLUG00000016599) mapk1 (ENSSLUG00000016463) Percomorphaceae_D ANCESTRAL SPECIES 7 ENSGT00390000001654 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 Anabantaria ANCESTRAL SPECIES 4 ENSGT00390000001654 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 Zig-zag eel MODERN SPECIES 23 si:dkey-174n20.1 (ENSMAMG00000003976) ENSMAMG00000024532 ENSMAMG00000024408 ENSMAMG00000024390 camk2b1 (ENSMAMG00000003849) ENSMAMG00000003800 ENSMAMG00000027267 hs3st1l2 (ENSMAMG00000003767) h2az2b (ENSMAMG00000026608) purbb (ENSMAMG00000003719) ENSMAMG00000003706 il1b (ENSMAMG00000003683) ENSMAMG00000003649 ENSMAMG00000003503 dapk1 (ENSMAMG00000003382) ctsla (ENSMAMG00000003344) #22 fbp2 (ENSMAMG00000003335) fbp1a (ENSMAMG00000003288) ENSMAMG00000003202 ENSMAMG00000003187 dmrt1 (ENSMAMG00000003170) dmrt3a (ENSMAMG00000003154) dmrt2a (ENSMAMG00000003133) ENSMAMG00000027282 SMARCA2 (ENSMAMG00000003056) ENSMAMG00000025030 adamts3 (ENSMAMG00000002934) ENSMAMG00000002874 slc4a4a (ENSMAMG00000002757) ENSMAMG00000002645 ENSMAMG00000002627 Anabantoidei ANCESTRAL SPECIES 4 ENSGT00390000001654 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 Climbing perch MODERN SPECIES 22 ENSATEG00000005941 ENSATEG00000025772 ENSATEG00000027082 ENSATEG00000027792 ENSATEG00000027215 ENSATEG00000006097 ENSATEG00000029606 ENSATEG00000028595 hs3st1l2 (ENSATEG00000030108) h2az2b (ENSATEG00000006161) ENSATEG00000006188 il1b (ENSATEG00000006195) ENSATEG00000006363 ENSATEG00000006396 dapk1 (ENSATEG00000006554) ctsla (ENSATEG00000006648) #22 fbp2 (ENSATEG00000006666) fbp1a (ENSATEG00000006725) ENSATEG00000006766 ENSATEG00000006821 dmrt1 (ENSATEG00000006852) dmrt3a (ENSATEG00000006893) dmrt2a (ENSATEG00000006909) SMARCA2 (ENSATEG00000006916) adamts3 (ENSATEG00000006922) ENSATEG00000007004 slc4a4a (ENSATEG00000007019) ENSATEG00000007145 ENSATEG00000007185 mapk1 (ENSATEG00000007189) ENSATEG00000028118 Siamese fighting fish MODERN SPECIES 20 tesca (ENSBSLG00000011902) FBXO21 (ENSBSLG00000011951) nf2a (ENSBSLG00000012057) CABP7 (ENSBSLG00000012515) rtn4r (ENSBSLG00000012559) ENSBSLG00000012562 hscb (ENSBSLG00000012568) LRRC8A (ENSBSLG00000012573) ppil3 (ENSBSLG00000012578) zgc:101858 (ENSBSLG00000012594) ENSBSLG00000012605 KCNT1 (ENSBSLG00000012624) camsap1b (ENSBSLG00000012715) ENSBSLG00000012882 dapk1 (ENSBSLG00000012906) ctsla (ENSBSLG00000013024) #22 fbp2 (ENSBSLG00000013027) fbp1a (ENSBSLG00000013030) ENSBSLG00000013134 cfap157 (ENSBSLG00000013197) dmrt1 (ENSBSLG00000013231) dmrt3a (ENSBSLG00000013269) dmrt2a (ENSBSLG00000013292) SMARCA2 (ENSBSLG00000013566) adamts3 (ENSBSLG00000016075) NPFFR2 (ENSBSLG00000017740) slc4a4a (ENSBSLG00000017814) rufy3 (ENSBSLG00000019126) ppil2 (ENSBSLG00000019292) YPEL2 (ENSBSLG00000020127) mapk1 (ENSBSLG00000020138) Carangaria ANCESTRAL SPECIES 9 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00970000193390.c.a.b.k ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00970000193390.c.a.b.l ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 Carangaria_A ANCESTRAL SPECIES 79 ENSGT00970000193390.c.a.b.l ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 Seriola ANCESTRAL SPECIES 115 ENSGT00940000153710.a ENSGT00940000153189.A ENSGT00940000161453 ENSGT00940000156771.h ENSGT00940000165677 ENSGT00940000156035.z ENSGT00940000156290.a ENSGT01070000253744.b.b.e ENSGT00940000156085 ENSGT00940000154821.a.b ENSGT00940000156282.a.a ENSGT00940000160420 ENSGT00940000156489 ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00900000141033.a ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943.db ENSGT00950000182943.eb ENSGT00940000156317.w.b ENSGT00940000165775.a Greater amberjack MODERN SPECIES 77 dmrt3a (ENSSDUG00000020353) dmrt1 (ENSSDUG00000020342) ENSSDUG00000020249 dapk1 (ENSSDUG00000020113) ctsla (ENSSDUG00000020082) #22 fbp1a (ENSSDUG00000020051) RUSC2 (ENSSDUG00000020019) ENSSDUG00000020004 h2az2b (ENSSDUG00000019978) PURB (ENSSDUG00000019970) ENSSDUG00000019962 il1b (ENSSDUG00000019504) il1b (ENSSDUG00000019432) CNNM4 (ENSSDUG00000019414) ENSSDUG00000019391 ENSSDUG00000019386 ENSSDUG00000019331 cfap157 (ENSSDUG00000019311) ENSSDUG00000019304 ENSSDUG00000019288 Yellowtail amberjack MODERN SPECIES 2921 stambpb (ENSSLDG00000025521) ppil2 (ENSSLDG00000025508) ypel1 (ENSSLDG00000025506) mapk1 (ENSSLDG00000025502) grsf1 (ENSSLDG00000025494) rufy3 (ENSSLDG00000025488) slc4a4a (ENSSLDG00000025472) NPFFR2 (ENSSLDG00000025466) adamts3 (ENSSLDG00000025458) SMARCA2 (ENSSLDG00000025449) dmrt2a (ENSSLDG00000025446) dmrt3a (ENSSLDG00000025443) dmrt1 (ENSSLDG00000025304) ENSSLDG00000025286 dapk1 (ENSSLDG00000025280) ctsla (ENSSLDG00000025276) #22 fbp2 (ENSSLDG00000025165) fbp1a (ENSSLDG00000025153) RUSC2 (ENSSLDG00000025142) h2az2a (ENSSLDG00000025137) PURB (ENSSLDG00000025132) ckap2l (ENSSLDG00000025126) ENSSLDG00000025123 ENSSLDG00000025112 CNNM4 (ENSSLDG00000025107) ENSSLDG00000025105 ENSSLDG00000025089 hs3st1l2 (ENSSLDG00000025082) ENSSLDG00000025078 ENSSLDG00000025076 Barramundi perch MODERN SPECIES 95 ptar1 (ENSLCAG00010023903) ENSLCAG00010023901 gas8 (ENSLCAG00010023899) ENSLCAG00010023897 ENSLCAG00010023894 ENSLCAG00010023892 ENSLCAG00010023890 hs3st1l2 (ENSLCAG00010023887) h2az2b (ENSLCAG00010023846) PURB (ENSLCAG00010023833) ENSLCAG00010023831 ENSLCAG00010023826 CNNM4 (ENSLCAG00010023822) ENSLCAG00010023757 dapk1 (ENSLCAG00010023657) ctsla (ENSLCAG00010023621) #22 fbp1a (ENSLCAG00010023610) ENSLCAG00010023606 cfap157 (ENSLCAG00010023604) dmrt1 (ENSLCAG00010023595) dmrt3a (ENSLCAG00010023592) dmrt2a (ENSLCAG00010023591) SMARCA2 (ENSLCAG00010023510) adamts3 (ENSLCAG00010023421) NPFFR2 (ENSLCAG00010023407) Pleuronectoidei ANCESTRAL SPECIES 34 ENSGT00940000154006.a ENSGT00390000001654 ENSGT00940000158390 ENSGT00730000110943.B.d.a ENSGT00940000165623 ENSGT00940000158973.a.a ENSGT00950000182924.A.b.b ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ENSGT00730000111240 ENSGT00940000156489 ENSGT00940000160420 ENSGT00940000156282.a.a ENSGT00940000154821.a.b ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 Tongue sole DUPLICATION Tongue sole MODERN SPECIES 397 ENSCSEG00000011966 ENSCSEG00000011972 ENSCSEG00000011980 ENSCSEG00000011990 ENSCSEG00000011994 marveld2b (ENSCSEG00000012007) oclnb (ENSCSEG00000012015) zgc:64051 (ENSCSEG00000012032) araf (ENSCSEG00000012037) ENSCSEG00000012058 ENSCSEG00000012067 ENSCSEG00000012084 ENSCSEG00000012125 ENSCSEG00000012130 ENSCSEG00000012137 ctsla (ENSCSEG00000012140) #22 serpind1 (ENSCSEG00000012172) ENSCSEG00000012177 SLC25A1 (ENSCSEG00000012186) ENSCSEG00000012227 dynll1 (ENSCSEG00000012258) rpl6 (ENSCSEG00000012238) ENSCSEG00000012266 ENSCSEG00000012274 mrpl40 (ENSCSEG00000012296) ENSCSEG00000012299 ENSCSEG00000012303 SET (ENSCSEG00000012321) ENSCSEG00000012344 TRAF2 (ENSCSEG00000012375) RABL6 (ENSCSEG00000012430) Tongue sole MODERN SPECIES 398 LETM2 (ENSCSEG00000019538) prnprs3 (ENSCSEG00000019531) prnprs3 (ENSCSEG00000019527) ENSCSEG00000019522 rassf2a (ENSCSEG00000019507) SLC23A2 (ENSCSEG00000019499) KCNIP3 (ENSCSEG00000019493) pcna (ENSCSEG00000019488) zgc:152830 (ENSCSEG00000019474) FAHD2A (ENSCSEG00000019465) gpat2 (ENSCSEG00000019441) adra2b (ENSCSEG00000019437) dusp2 (ENSCSEG00000019434) MYORG (ENSCSEG00000019430) dapk1 (ENSCSEG00000019414) catl (ENSCSEG00000019396) #22 fbp2 (ENSCSEG00000019390) fbp1a (ENSCSEG00000019386) ENSCSEG00000019381 ENSCSEG00000019379 dmrt1 (ENSCSEG00000019352) dmrt3a (ENSCSEG00000019346) dmrt2a (ENSCSEG00000019331) SMARCA2 (ENSCSEG00000019311) adamts3 (ENSCSEG00000019302) NPFFR2 (ENSCSEG00000019293) slc4a4a (ENSCSEG00000019255) rufy3 (ENSCSEG00000019228) ENSCSEG00000019209 mapk1 (ENSCSEG00000019114) ENSCSEG00000019092 Turbot MODERN SPECIES 21 ENSSMAG00000012738 ENSSMAG00000012731 ENSSMAG00000012600 ENSSMAG00000031657 ENSSMAG00000012537 ENSSMAG00000012510 ENSSMAG00000021885 ENSSMAG00000012508 ENSSMAG00000012485 ENSSMAG00000032210 ENSSMAG00000012473 IL-1b (ENSSMAG00000012432) ENSSMAG00000012419 ENSSMAG00000013308 dapk1 (ENSSMAG00000013330) ctsla (ENSSMAG00000013382) #22 fbp1a (ENSSMAG00000013448) ENSSMAG00000013519 ENSSMAG00000013599 dmrt1 (ENSSMAG00000013610) dmrt3a (ENSSMAG00000022000) dmrt2a (ENSSMAG00000013678) SMARCA2 (ENSSMAG00000013707) adamts3 (ENSSMAG00000013877) ENSSMAG00000013933 slc4a4a (ENSSMAG00000013940) ENSSMAG00000013999 ENSSMAG00000014074 ENSSMAG00000014105 ppil2 (ENSSMAG00000014124) ENSSMAG00000027503 Osteoglossiformes ANCESTRAL SPECIES 122 ENSGT00390000014845 ENSGT00670000099470 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000167385 ENSGT00940000166272 ENSGT00940000164944.n ENSGT00940000166263.a ENSGT00940000163584.a ENSGT00940000158491.a.b ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000001195.a.a.b ENSGT00940000153424.a.b.b ENSGT00940000153321.b.b #22 ENSGT00390000015513.a.b.b.f ENSGT00940000154886.a.a.g.a ENSGT00940000156489 ENSGT00940000160420.d ENSGT00940000156282.a.a.h ENSGT00940000154821.a.a P. kingsleyae MODERN SPECIES 163 tnfrsfa (ENSPKIG00000004160) unc5da (ENSPKIG00000004126) ENSPKIG00000004033 aqp3b (ENSPKIG00000004013) ENSPKIG00000003992 wdr54 (ENSPKIG00000003958) rhobtb4 (ENSPKIG00000003871) ENSPKIG00000003740 ENSPKIG00000003676 rtkna (ENSPKIG00000003583) ENSPKIG00000003484 dab2 (ENSPKIG00000003408) c9 (ENSPKIG00000003353) gas1a (ENSPKIG00000003338) dapk1 (ENSPKIG00000003300) ctsla (ENSPKIG00000003259) #22 fbp1b (ENSPKIG00000003215) ENSPKIG00000003169 ENSPKIG00000003133 dmrt3a (ENSPKIG00000003109) DMRT2 (ENSPKIG00000003092) ENSPKIG00000003039 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 21 ENSSFOG00015031602 tnfrsfa (ENSSFOG00015020094) UNC5D (ENSSFOG00015020067) aqp3b (ENSSFOG00015020054) ENSSFOG00015030433 wdr54 (ENSSFOG00015020034) rhobtb4 (ENSSFOG00015026928) ENSSFOG00015019950 ENSSFOG00015019932 rtkna (ENSSFOG00015019916) ENSSFOG00015019884 dab2 (ENSSFOG00015028048) c9 (ENSSFOG00015019837) gas1b (ENSSFOG00015024998) dapk1 (ENSSFOG00015019739) si:dkey-26g8.5 (ENSSFOG00015019688) #22 ENSSFOG00015019665 ENSSFOG00015019609 dmrt1 (ENSSFOG00015032337) DMRT3 (ENSSFOG00015019574) DMRT2 (ENSSFOG00015019541) ENSSFOG00015019506 NPFFR2 (ENSSFOG00015019405) SLC4A4 (ENSSFOG00015019317) mob1ba (ENSSFOG00015019281) RUFY3 (ENSSFOG00015019217) ENSSFOG00015019206 cxcl11.6 (ENSSFOG00015019137) ENSSFOG00015019118 ENSSFOG00015019085 cnot6l (ENSSFOG00015019044) Asian bonytongue MODERN SPECIES 8 rhobtb4 (ENSSFOG00015015822) ENSSFOG00015015763 ENSSFOG00015015747 rtkna (ENSSFOG00015015698) smn1 (ENSSFOG00015015507) hspb11 (ENSSFOG00015032493) mccc2 (ENSSFOG00015015370) ENSSFOG00015015341 DAB2 (ENSSFOG00015015237) TMEM8B (ENSSFOG00015015208) ENSSFOG00015025706 ENSSFOG00015015181 tars1 (ENSSFOG00015015118) gas1a (ENSSFOG00015027640) dapk1 (ENSSFOG00015015059) ctsla (ENSSFOG00015015031) #22 fbp2 (ENSSFOG00015015025) ENSSFOG00015015007 ENSSFOG00015014968 dmrt3a (ENSSFOG00015014937) dmrt2a (ENSSFOG00015014922) SMARCA2 (ENSSFOG00015014870) adamts3 (ENSSFOG00015014846) NPFFR2 (ENSSFOG00015029921) gc (ENSSFOG00015014799) slc4a4a (ENSSFOG00015032673) dck (ENSSFOG00015014636) ENSSFOG00015030617 rufy3 (ENSSFOG00015014519) NPFFR2 (ENSSFOG00015014828) slc4a4a (ENSSFOG00015014669) Reedfish DUPLICATION Reedfish MODERN SPECIES 15 plcxd3 (ENSECRG00000009969) oxct1a (ENSECRG00000009977) rimoc1 (ENSECRG00000009986) FBXO4 (ENSECRG00000009994) ENSECRG00000010010 ENSECRG00000010033 znf131 (ENSECRG00000010040) ENSECRG00000010051 hmgcs1 (ENSECRG00000010062) TMEM8B (ENSECRG00000010078) ENSECRG00000010092 ENSECRG00000010100 tars1 (ENSECRG00000010130) gas1a (ENSECRG00000010191) dapk1 (ENSECRG00000010207) si:dkey-26g8.5 (ENSECRG00000010227) #22 fbp2 (ENSECRG00000010235) FBP1 (ENSECRG00000010251) KANK1 (ENSECRG00000010264) dmrt1 (ENSECRG00000010275) ENSECRG00000010288 dmrt3a (ENSECRG00000010299) dmrt2a (ENSECRG00000010306) smarca2 (ENSECRG00000010322) adamts3 (ENSECRG00000011880) ENSECRG00000011896 NPFFR2 (ENSECRG00000011914) gc (ENSECRG00000011938) slc4a4a (ENSECRG00000012016) dck (ENSECRG00000012135) mob1bb (ENSECRG00000012154) Reedfish MODERN SPECIES 3 ENSECRG00000018073 ENSECRG00000018056 ENSECRG00000018029 ENSECRG00000017968 ENSECRG00000017818 ENSECRG00000017770 ENSECRG00000017754 ENSECRG00000017740 fbn2b (ENSECRG00000016720) cers4a (ENSECRG00000016237) lsm7 (ENSECRG00000016204) sppl2 (ENSECRG00000016173) ENSECRG00000016132 ENSECRG00000016015 timm13 (ENSECRG00000015961) ENSECRG00000015947 #22 enc3 (ENSECRG00000015936) ncln (ENSECRG00000015892) s1pr4 (ENSECRG00000015875) mfsd14a2 (ENSECRG00000015839) ENSECRG00000015802 use1 (ENSECRG00000015778) insrb (ENSECRG00000015724) arhgef18a (ENSECRG00000015672) ENSECRG00000015646 CERS1 (ENSECRG00000015592) cope (ENSECRG00000015548) tnfaip8l1 (ENSECRG00000015531) mydgf (ENSECRG00000015506) loxl5b (ENSECRG00000015303) NMRK2 (ENSECRG00000015218) Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1570 palm1b (ENSCMIG00000018692) PLPPR3 (ENSCMIG00000018693) ENSCMIG00000018694 ENSCMIG00000018701 ##22 ENSCMIG00000018717 ENSCMIG00000018722 sirt6 (ENSCMIG00000018726) rxfp3.2b (ENSCMIG00000018736) ENSCMIG00000018739 map2k2a (ENSCMIG00000018756) ZBTB7A (ENSCMIG00000018762) ENSCMIG00000018764 eef2 (ENSCMIG00000018833) ENSCMIG00000018922 ENSCMIG00000018924 ##22 ENSCMIG00000018925 #22 ENSCMIG00000018973 ##22 ENSCMIG00000019127 ##22 ENSCMIG00000019213 ##22 ENSCMIG00000019261 ##22 ENSCMIG00000019263 ##22 ENSCMIG00000019266 ##22 dpp9 (ENSCMIG00000019315) rpl37 (ENSCMIG00000019413) elavl1b (ENSCMIG00000019418) cdo1 (ENSCMIG00000019421) FEM1A (ENSCMIG00000019424) ENSCMIG00000019426 ENSCMIG00000019428 uhrf1 (ENSCMIG00000019437) ENSCMIG00000019449 Elephant shark MODERN SPECIES 1687 agtpbp1 (ENSCMIG00000004404) naa35 (ENSCMIG00000004600) ENSCMIG00000004617 ENSCMIG00000004698 isca1 (ENSCMIG00000004882) TUT7 (ENSCMIG00000004923) ENSCMIG00000005083 gas1a (ENSCMIG00000005093) dapk1 (ENSCMIG00000005116) si:dkey-26g8.5 (ENSCMIG00000005238) #22 fbp2 (ENSCMIG00000005314) FBP1 (ENSCMIG00000005377) Cyclostomata DUPLICATION Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES ENSGT00940000153321.b.b.a.a #22 Lamprey DUPLICATION Lamprey DUPLICATION Lamprey MODERN SPECIES 5962 ENSPMAG00000010258 #22 Lamprey MODERN SPECIES 4989 ENSPMAG00000006725 #22 Lamprey DUPLICATION Lamprey MODERN SPECIES 4639 ENSPMAG00000003453 #22 Lamprey MODERN SPECIES 3849 ENSPMAG00000009483 #22 Hagfish MODERN SPECIES 674 ENSEBUG00000014584 ENSEBUG00000003379 ENSEBUG00000011931 ENSEBUG00000015392 ENSEBUG00000003820 ENSEBUG00000012123 ENSEBUG00000013783 htr1ab (ENSEBUG00000004532) ENSEBUG00000005234 ENSEBUG00000003098 #22 fbp1b (ENSEBUG00000003995) gtpbp3 (ENSEBUG00000007810) ENSEBUG00000013212 ENSEBUG00000012534 ENSEBUG00000002089 Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES ENSGT00940000153321.b.b.a.b.a #22 Lamprey MODERN SPECIES 1425 ENSPMAG00000007699 #22 Hagfish MODERN SPECIES 1436 ENSEBUG00000016205 cbfb (ENSEBUG00000014280) ENSEBUG00000006854 ENSEBUG00000015988 ENSEBUG00000012379 ENSEBUG00000005587 ENSEBUG00000002268 ENSEBUG00000015261 ENSEBUG00000007479 ENSEBUG00000002468 ENSEBUG00000002335 ENSEBUG00000005159 ENSEBUG00000011357 #22 ENSEBUG00000016998 ENSEBUG00000006899 use1 (ENSEBUG00000012923) ENSEBUG00000015087 ENSEBUG00000009753 carnmt1 (ENSEBUG00000016343) sf3b4 (ENSEBUG00000011194) KBTBD13 (ENSEBUG00000008928) ENSEBUG00000014203 ENSEBUG00000008477 Cyclostomata ANCESTRAL SPECIES ENSGT00940000153321.b.b.a.b.b #22 Hagfish MODERN SPECIES 42 ENSEBUG00000016897 cct3 (ENSEBUG00000003432) ENSEBUG00000016916 #22 ENSEBUG00000006704 ENSEBUG00000008678 ENSEBUG00000004962 ENSEBUG00000012463 idh2 (ENSEBUG00000013895) ENSEBUG00000001457 ENSEBUG00000008986 MRPS11 (ENSEBUG00000010376) det1 (ENSEBUG00000001348) ENSEBUG00000013609 ENSEBUG00000014866 ENSEBUG00000006536 ENSEBUG00000004826 ENSEBUG00000004527 ENSEBUG00000010112 Cyclostomata ANCESTRAL SPECIES 806 ENSGT00940000153321.b.b.b #22 ENSGT00390000015513 Lamprey DUPLICATION Lamprey MODERN SPECIES 4539 ENSPMAG00000007289 #22 Lamprey MODERN SPECIES 671 atp5fa1 (ENSPMAG00000005764) ch25hl1.2 (ENSPMAG00000010341) dpp9 (ENSPMAG00000005780) ENSPMAG00000005817 #22 ENSPMAG00000005881 ENSPMAG00000005884 GBA1 (ENSPMAG00000005895) mtx3 (ENSPMAG00000005920) ENSPMAG00000005942 Lamprey MODERN SPECIES 304 ENSPMAG00000006214 ENSPMAG00000006210 ENSPMAG00000006206 ctsll (ENSPMAG00000006193) #22