Pecora	ANCESTRAL SPECIES	11	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00940000161677.d #7	ENSGT00940000161677.c.b #8	ENSGT00940000153255.a.j ##10	ENSGT00940000153255.b.a.b.f #10	ENSGT00940000153255.b.a.a.a #12	ENSGT00940000153255.b.a.a.b ##10	ENSGT00940000161677.c.a #14	ENSGT00940000153255.b.b #15	ENSGT01090000260024.A.a.b.a.b.a.b #16	ENSGT01090000260044.A.b.b.c.a.a #17	ENSGT01090000260044.A.b.b.d.s.a.b #19	ENSGT00390000017365.b.d #22	ENSGT00390000017365.b.c.a #21	ENSGT01050000244815.B.a.b.a	ENSGT01090000260044.A.b.b.c.b #23	ENSGT01100000263477.B.c.a #24	ENSGT01100000263477.B.c.b #25	ENSGT00940000160920 #26	ENSGT00940000154273.a #27	ENSGT00950000183106.a.b #28	ENSGT00940000157383 #29	ENSGT00940000156657	ENSGT00390000002723	ENSGT00440000033697 #30	ENSGT01100000263477.D.a #31	ENSGT01100000263477.D.b ##24	ENSGT00390000002099
Percora_a	ANCESTRAL SPECIES	11	ENSGT00390000016016.A	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00940000161677.d #7	ENSGT00940000161677.c.b #8	ENSGT00940000153255.a.j ##10	ENSGT00940000153255.b.a.b.f #10	ENSGT00940000153255.b.a.a.a #12	ENSGT00940000153255.b.a.a.b ##10	ENSGT00940000161677.c.a #14	ENSGT00940000153255.b.b #15	ENSGT01090000260024.A.a.b.a.b.a.b #16	ENSGT01090000260044.A.b.b.c.a.a #17	ENSGT01090000260044.A.b.b.d.s.a.a #18	ENSGT01090000260044.A.b.b.d.s.a.b #19	ENSGT00390000017365.b.d #22	ENSGT00390000017365.b.c.a #21	ENSGT01050000244815.B.a.b.a	ENSGT01090000260044.A.b.b.c.b #23	ENSGT01100000263477.B.c.a #24	ENSGT01100000263477.B.c.b #25	ENSGT00940000160920 #26	ENSGT00940000154273.a #27	ENSGT00950000183106.a.b #28	ENSGT00940000157383 #29	ENSGT00940000156657	ENSGT00390000002723	ENSGT00440000033697 #30	ENSGT01100000263477.D.a #31	ENSGT01100000263477.D.b ##24	ENSGT00390000002099
Bovidae	ANCESTRAL SPECIES	12	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00940000153255.a.j.a ##10	ENSGT00940000153255.a.j.b ##10	ENSGT00940000161677.c.b #8	ENSGT00940000153255.b.a.b.f #10	ENSGT00940000153255.b.a.a.a #12	ENSGT00940000153255.a.i ##10	ENSGT00940000153255.b.a.a.b ##10	ENSGT00940000161677.c.a #14	ENSGT00940000153255.b.b #15	ENSGT01090000260024.A.a.b.a.b.a.b #16	ENSGT01090000260044.A.b.b.c.a.a #17	ENSGT01090000260044.A.b.b.d.s.a.a #18	ENSGT01090000260044.A.b.b.d.s.a.b #19	ENSGT00390000017365.b.d #22	ENSGT00390000017365.b.c.a #21	ENSGT01050000244815.B.a.b.a	ENSGT01090000260044.A.b.b.c.b #23	ENSGT01100000263477.B.c.a #24	ENSGT01100000263477.B.c.b #25	ENSGT00940000160920 #26	ENSGT00940000154273.a #27	ENSGT00950000183106.a.b #28	ENSGT00940000157383 #29	ENSGT00940000156657	ENSGT00390000002723	ENSGT00440000033697 #30	ENSGT01100000263477.D.a #31	ENSGT01100000263477.D.b ##24	ENSGT00390000002099
Caprinae	ANCESTRAL SPECIES	10	ENSGT00650000093445	ENSGT01030000234571.b.b.b.a.a	ENSGT00940000153255.a.j.a ##10	ENSGT00940000153255.a.j.b ##10	ENSGT00940000161677.c.b #8	ENSGT00940000153255.b.a.b.f #10	ENSGT00940000153255.b.a.a.a #12	ENSGT00940000153255.a.i ##10	ENSGT00940000161677.c.a #14	ENSGT00940000153255.b.b #15	ENSGT01090000260024.A.a.b.a.b.a.b #16	ENSGT01090000260044.A.b.b.c.a.a #17	ENSGT01090000260044.A.b.b.d.s.a.a #18	ENSGT01090000260044.A.b.b.d.s.a.b.b #20	ENSGT01090000260044.A.b.b.d.s.a.b.a #19	ENSGT00390000017365.b.d #22	ENSGT00390000017365.b.c.a #21	ENSGT01090000260044.A.b.b.c.b #23	ENSGT01100000263477.B.c.a #24	ENSGT01100000263477.B.c.b #25	ENSGT00940000160920 #26	ENSGT00940000154273.a #27	ENSGT00950000183106.a.b #28	ENSGT00940000157383 #29	ENSGT00940000156657	ENSGT00390000002723	ENSGT00440000033697 #30	ENSGT01100000263477.D.a #31	ENSGT01090000260086.A.c.b.b #32	ENSGT00940000163070.k #33	ENSGT00940000163070.l ##33
Rambouillet Sheep	MODERN SPECIES	20	ENSOARG00020001976 #7	ENSOARG00020001958 #8	ENSOARG00020001943 #9	ENSOARG00020001932 #10	OR2A2 (ENSOARG00020001927) #11	ENSOARG00020001917 #12	ENSOARG00020001910 #13	OR2A25 (ENSOARG00020001903) #14	OR2A5 (ENSOARG00020001889) #15	OR6B1 (ENSOARG00020001877) #16	ENSOARG00020001871 #17	ENSOARG00020001845 #18	ENSOARG00020001836 #19	ENSOARG00020001832 #20	ENSOARG00020001817 #21	TCAF1 (ENSOARG00020001788) #22	ENSOARG00020001771 #23	TAS2R41 (ENSOARG00020001766) #24	TAS2R60 (ENSOARG00020001759) #25	EPHA1 (ENSOARG00020001729) #26	ZYX (ENSOARG00020001688) #27	FAM131B (ENSOARG00020001620) #28	CLCN1 (ENSOARG00020001544) #29	GSTK1 (ENSOARG00020001444) #30	TAS2R40 (ENSOARG00020001421) #31	OR6V1 (ENSOARG00020001406) #32	ENSOARG00020001387 #33	ENSOARG00020001376 #34	ENSOARG00020001347 #35	TRPV5 (ENSOARG00020001321) #36	TRPV6 (ENSOARG00020001294) #37
Goat	MODERN SPECIES	23	ENSCHIG00000025834 ##10	ENSCHIG00000014478 ##10	ENSCHIG00000007573 #8	ENSCHIG00000012182 #8	ENSCHIG00000010929 #10	OR2A2 (ENSCHIG00000009764) #10	ENSCHIG00000016790 #12	ENSCHIG00000018216 ##10	OR2A25 (ENSCHIG00000009649) #14	OR2A5 (ENSCHIG00000010464) #15	OR6B1 (ENSCHIG00000009347) #16	ENSCHIG00000010893 #18	ENSCHIG00000010251 #18	ENSCHIG00000011564 #20	ENSCHIG00000010769 #19	TCAF1 (ENSCHIG00000007610) #22	ENSCHIG00000016367 #21	TAS2R41 (ENSCHIG00000003306) #24	TAS2R60 (ENSCHIG00000005346) #25	EPHA1 (ENSCHIG00000021379) #26	ZYX (ENSCHIG00000006679) #27	FAM131B (ENSCHIG00000024536) #28	CLCN1 (ENSCHIG00000021249) #29	CASP2 (ENSCHIG00000017936)	TMEM139 (ENSCHIG00000008369)	GSTK1 (ENSCHIG00000020481) #30	TAS2R40 (ENSCHIG00000013838) #31	OR6V1 (ENSCHIG00000009976) #32	ENSCHIG00000016077 #33	ENSCHIG00000026693 #33	ENSCHIG00000020443 #33
Bovinae	ANCESTRAL SPECIES	8	ENSGT00940000153255.a.j.b.b ##10	ENSGT00940000161677.c.b.k #8	ENSGT00940000153255.a.j.b.a ##10	ENSGT00940000161677.c.b.l #8	ENSGT00940000153255.b.a.b.f #10	ENSGT00940000153255.b.a.a.a #12	ENSGT00940000153255.a.i ##10	ENSGT00940000153255.b.a.a.b ##10	ENSGT00940000161677.c.a #14	ENSGT00940000153255.b.b #15	ENSGT01090000260024.A.a.b.a.b.a.b #16	ENSGT01090000260044.A.b.b.c.a.a #17	ENSGT01090000260044.A.b.b.d.s.a.a.c.a #18	ENSGT01090000260044.A.b.b.d.s.a.b.d #19	ENSGT01090000260044.A.b.b.d.s.a.a.c.b #18	ENSGT00390000017365.b.d #22	ENSGT00390000017365.b.c.a.d #21	ENSGT01050000244815.B.a.b.a	ENSGT01090000260044.A.b.b.c.b #23	ENSGT01100000263477.B.c.a #24	ENSGT01100000263477.B.c.b #25	ENSGT00940000160920 #26	ENSGT00940000154273.a #27	ENSGT00950000183106.a.b #28	ENSGT00940000157383 #29	ENSGT00940000156657	ENSGT00390000002723	ENSGT00440000033697 #30	ENSGT01100000263477.D.a #31	ENSGT01100000263477.D.b ##24	ENSGT00390000002099
Bos	ANCESTRAL SPECIES	8	ENSGT00940000153255.a.j.a ##10	ENSGT00940000153255.a.j.b.b ##10	ENSGT00940000161677.c.b.k #8	ENSGT00940000153255.a.j.b.a ##10	ENSGT00940000161677.c.b.l #8	ENSGT00940000153255.b.a.b.f #10	ENSGT00940000153255.b.a.a.a #12	ENSGT00940000153255.a.i ##10	ENSGT00940000153255.b.a.a.b ##10	ENSGT00940000161677.c.a #14	ENSGT00940000153255.b.b #15	ENSGT01090000260024.A.a.b.a.b.a.b #16	ENSGT01090000260044.A.b.b.c.a.a #17	ENSGT01090000260044.A.b.b.d.s.a.b.d #19	ENSGT01090000260044.A.b.b.d.s.a.b.c #19	ENSGT00390000017365.b.d #22	ENSGT00390000017365.b.c.a.d #21	ENSGT01050000244815.B.a.b.a	ENSGT01090000260044.A.b.b.c.b #23	ENSGT01100000263477.B.c.a #24	ENSGT01100000263477.B.c.b #25	ENSGT00940000160920 #26	ENSGT00940000154273.a #27	ENSGT00950000183106.a.b #28	ENSGT00940000157383 #29	ENSGT00940000156657	ENSGT00390000002723	ENSGT00440000033697 #30	ENSGT01100000263477.D.a #31	ENSGT01100000263477.D.b ##24	ENSGT00390000002099
Bos_a	ANCESTRAL SPECIES	37	ENSGT01030000234571.b.b.b.a.a	ENSGT00940000153255.a.j.a ##10	ENSGT00940000153255.a.j.b.b ##10	ENSGT00940000153255.a.j.b.a ##10	ENSGT00940000161677.c.b.l #8	ENSGT00940000153255.b.a.b.f #10	ENSGT00940000153255.b.a.a.a #12	ENSGT00940000153255.a.i ##10	ENSGT00940000153255.b.a.a.b ##10	ENSGT00940000161677.c.a #14	ENSGT00940000153255.b.b #15	ENSGT01090000260024.A.a.b.a.b.a.b #16	ENSGT01090000260044.A.b.b.c.a.a #17	ENSGT01090000260044.A.b.b.d.s.a.b.d #19	ENSGT01090000260044.A.b.b.d.s.a.b.c #19	ENSGT00390000017365.b.d #22	ENSGT00390000017365.b.c.a.d #21	ENSGT01090000260044.A.b.b.c.b #23	ENSGT01100000263477.B.c.a #24	ENSGT01100000263477.B.c.b #25	ENSGT00940000160920 #26	ENSGT00940000154273.a #27	ENSGT00950000183106.a.b #28	ENSGT00940000157383 #29	ENSGT00940000156657	ENSGT00390000002723	ENSGT00440000033697 #30	ENSGT01100000263477.D.b ##24	ENSGT00390000002099	ENSGT01090000260086.A.c.b.b #32	ENSGT00940000163070.k #33
Wild yak	MODERN SPECIES	24	ENSBMUG00000013967	ENSBMUG00000013952	OR2A2 (ENSBMUG00000013942) #10	ENSBMUG00000013933 #12	ENSBMUG00000013929 #12	OR2A12 (ENSBMUG00000013914) ##10	OR2A25 (ENSBMUG00000013901) #14	OR2A5 (ENSBMUG00000013892) #15	OR6B1 (ENSBMUG00000013882) #16	ENSBMUG00000013868 #17	ENSBMUG00000013855 ##17	ENSBMUG00000013844 ##17	ENSBMUG00000013837 #18	ENSBMUG00000013826 #19	ENSBMUG00000013820 #19	TCAF1 (ENSBMUG00000013807) #22
Domestic yak	MODERN SPECIES	23	ENSBGRG00000011825	ENSBGRG00000011642 ##10	ENSBGRG00000011585 ##10	ENSBGRG00000011473 #10	OR2A2 (ENSBGRG00000011455) #10	OR2A14 (ENSBGRG00000011426) #12	ENSBGRG00000011357 ##10	OR2A12 (ENSBGRG00000011332) ##10	OR2A25 (ENSBGRG00000011310) #14	ENSBGRG00000011278 #15	OR6B1 (ENSBGRG00000011263) #16	ENSBGRG00000011223 #17	ENSBGRG00000010933 #19	ENSBGRG00000010855 #19	ENSBGRG00000010813 #21	TCAF1 (ENSBGRG00000010729) #22	ENSBGRG00000010707	ENSBGRG00000010546 #21	ENSBGRG00000010526 #23	TAS2R41 (ENSBGRG00000010486) #24	TAS2R60 (ENSBGRG00000010460) #25	EPHA1 (ENSBGRG00000010287) #26	ZYX (ENSBGRG00000010163) #27	FAM131B (ENSBGRG00000010038) #28	CLCN1 (ENSBGRG00000009775) #29	CASP2 (ENSBGRG00000009577)	TMEM139 (ENSBGRG00000009525)	GSTK1 (ENSBGRG00000009181) #30	TAS2R39 (ENSBGRG00000009156) ##24	ENSBGRG00000009113	PIP (ENSBGRG00000009071)
Bos_b	ANCESTRAL SPECIES	7	ENSGT01030000234571.b.b.b.a.a	ENSGT00940000153255.a.j.b.b ##10	ENSGT00940000161677.c.b.k #8	ENSGT00940000153255.b.a.b.f #10	ENSGT00940000153255.b.a.a.a #12	ENSGT00940000153255.a.i ##10	ENSGT00940000153255.b.a.a.b ##10	ENSGT00940000161677.c.a #14	ENSGT00940000153255.b.b #15	ENSGT01090000260024.A.a.b.a.b.a.b #16	ENSGT01090000260044.A.b.b.c.a.a #17	ENSGT01090000260044.A.b.b.d.t ##17	ENSGT01090000260044.A.b.b.d.s.a.a.d #18	ENSGT01090000260044.A.b.b.d.s.a.b.d #19	ENSGT01090000260044.A.b.b.d.s.a.b.c #19	ENSGT00390000017365.b.d #22	ENSGT00390000017365.b.c.a.d #21	ENSGT01050000244815.B.a.b.a	ENSGT01090000260044.A.b.b.c.b #23	ENSGT01100000263477.B.c.a #24	ENSGT01100000263477.B.c.b #25	ENSGT00940000160920 #26	ENSGT00940000154273.a #27	ENSGT00950000183106.a.b #28	ENSGT00940000157383 #29	ENSGT00940000156657	ENSGT00390000002723	ENSGT00440000033697 #30	ENSGT01100000263477.D.a #31	ENSGT01100000263477.D.b ##24	ENSGT00390000002099
Hybrid Bos Indicus	MODERN SPECIES	23	PDIA4 (ENSBIXG00005011823)	ENSBIXG00005006326	EZH2 (ENSBIXG00005011741)	CUL1 (ENSBIXG00005011500)	CNTNAP2 (ENSBIXG00005011304)	ENSBIXG00005011107	ARHGEF5 (ENSBIXG00005011019)	ENSBIXG00005010959 ##10	ENSBIXG00005000575 #8	ENSBIXG00005010917 ##10	ENSBIXG00005000967 #8	ENSBIXG00005010877	ENSBIXG00005010864 #10	OR2A14 (ENSBIXG00005000956) #12	ENSBIXG00005010821 #17	TCAF1 (ENSBIXG00005010796) #22	ENSBIXG00005010748 #23	TAS2R41 (ENSBIXG00005010737) #24	TAS2R60 (ENSBIXG00005000625) #25	EPHA1 (ENSBIXG00005010711) #26	ZYX (ENSBIXG00005010659) #27	FAM131B (ENSBIXG00005000657) #28	CLCN1 (ENSBIXG00005000686) #29	CASP2 (ENSBIXG00005010484)	TMEM139 (ENSBIXG00005010434)	GSTK1 (ENSBIXG00005010396) #30	ENSBIXG00005010334	TAS2R39 (ENSBIXG00005010321) ##24	ENSBIXG00005000839	PIP (ENSBIXG00005010306)	OR6V1 (ENSBIXG00005010283) #32
Cow	MODERN SPECIES	23	ARHGEF5 (ENSBTAG00000001815)	OR2A62 (ENSBTAG00000050364) ##10	OR2A7 (ENSBTAG00000020364) #8	OR2A13 (ENSBTAG00000049625) #10	ENSBTAG00000055202 #12	ENSBTAG00000052051 ##10	ENSBTAG00000053058 ##10	OR2A25 (ENSBTAG00000049531) #14	OR2A5 (ENSBTAG00000051510) #15	OR6B1 (ENSBTAG00000040130) #16	OR2Q1 (ENSBTAG00000011191) #17	OR2F1D (ENSBTAG00000054509) ##17	OR2F1 (ENSBTAG00000053730) #18	OR2F2B (ENSBTAG00000051926) #19	OR2F2 (ENSBTAG00000050270) #19	TCAF1 (ENSBTAG00000002554) #22	TCAF2 (ENSBTAG00000005475) #21	OR10AC1 (ENSBTAG00000013248)	OR2R3 (ENSBTAG00000039614) #23	TAS2R60 (ENSBTAG00000050328) #25	EPHA1 (ENSBTAG00000006359) #26	ZYX (ENSBTAG00000017970) #27	FAM131B (ENSBTAG00000009418) #28	CLCN1 (ENSBTAG00000009182) #29	CASP2 (ENSBTAG00000018159)	TMEM139 (ENSBTAG00000018158)	GSTK1 (ENSBTAG00000009839) #30	TAS2R40 (ENSBTAG00000040040) #31	TAS2R39 (ENSBTAG00000054827) ##24	ENSBTAG00000050494	PIP (ENSBTAG00000006655)
American bison	MODERN SPECIES	3128	ENSBBBG00000014267 ##10	ENSBBBG00000003236 #8	ENSBBBG00000014276 #10	ENSBBBG00000003241 ##10	ENSBBBG00000014285 #8	OR2A2 (ENSBBBG00000014292) #10	OR2A14 (ENSBBBG00000014295) #12	OR2A12 (ENSBBBG00000014304) ##10	OR2A25 (ENSBBBG00000014308) #14	OR2A5 (ENSBBBG00000003254) #15	OR6B1 (ENSBBBG00000014313) #16	ENSBBBG00000014319 #17	ENSBBBG00000003258 #18	ENSBBBG00000014326 #19	ENSBBBG00000009118 #18	TCAF1 (ENSBBBG00000014331) #22	ENSBBBG00000014348 #21	TAS2R41 (ENSBBBG00000014356) #24	TAS2R60 (ENSBBBG00000001417) #25	EPHA1 (ENSBBBG00000014387) #26
Siberian musk deer	MODERN SPECIES	84	ENSMMSG00000003588 ##10	ENSMMSG00000003598 ##10	ENSMMSG00000003609 #8	ENSMMSG00000003615 #10	ENSMMSG00000003626 #10	OR2A14 (ENSMMSG00000003637) #12	ENSMMSG00000003641 #10	ENSMMSG00000003652 ##10	OR2A25 (ENSMMSG00000003659) #14	OR2A5 (ENSMMSG00000003671) #15	OR6B1 (ENSMMSG00000003678) #16	ENSMMSG00000003684 ##17	ENSMMSG00000003700 ##17	ENSMMSG00000003709 ##17	ENSMMSG00000003723 ##17	TCAF1 (ENSMMSG00000003737) #22	ENSMMSG00000003759 #21	TAS2R41 (ENSMMSG00000003772) #24	TAS2R60 (ENSMMSG00000003779) #25	EPHA1 (ENSMMSG00000003796) #26	ZYX (ENSMMSG00000003826) #27	FAM131B (ENSMMSG00000003846) #28	CLCN1 (ENSMMSG00000000092) #29	CASP2 (ENSMMSG00000000145)	TMEM139 (ENSMMSG00000000185)	GSTK1 (ENSMMSG00000000207) #30	TAS2R40 (ENSMMSG00000000247) #31	TAS2R39 (ENSMMSG00000000261) ##24	ENSMMSG00000000279	OR6V1 (ENSMMSG00000000294) #32	ENSMMSG00000000302 #33
Yarkand deer	MODERN SPECIES	9	PDIA4 (ENSCHYG00000013365)	EZH2 (ENSCHYG00000012976)	ENSCHYG00000012504	ENSCHYG00000012440	CNTNAP2 (ENSCHYG00000012205)	TPK1 (ENSCHYG00000011988)	ENSCHYG00000011941	ARHGEF5 (ENSCHYG00000011761)	ENSCHYG00000011730 #8	OR2A2 (ENSCHYG00000011688) #10	ENSCHYG00000011672 #12	ENSCHYG00000011637 #12	ENSCHYG00000011607 #17	ENSCHYG00000011582 #19	ENSCHYG00000011545 #19	TCAF1 (ENSCHYG00000011281) #22	ENSCHYG00000011238 #23	TAS2R41 (ENSCHYG00000011198) #24	TAS2R60 (ENSCHYG00000011177) #25	EPHA1 (ENSCHYG00000010819) #26	ZYX (ENSCHYG00000010590) #27	FAM131B (ENSCHYG00000010412) #28	CLCN1 (ENSCHYG00000010169) #29	CASP2 (ENSCHYG00000009814)	TMEM139 (ENSCHYG00000009764)	ENSCHYG00000009529 #30	TAS2R40 (ENSCHYG00000009492) #31	TAS2R39 (ENSCHYG00000009484) ##24	PIP (ENSCHYG00000024606)	OR6V1 (ENSCHYG00000024601) #32	OR9A2 (ENSCHYG00000024594) ##33