Sarcopterygii	ANCESTRAL SPECIES	81			ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00660000097148	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000154396.a	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.b	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D	ENSGT00940000155804
Tetrapoda	ANCESTRAL SPECIES	2	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00660000097148	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154396.a	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.b	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D
Amniota	ANCESTRAL SPECIES	4	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D
Mammalia	ANCESTRAL SPECIES	24	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00940000160907 #21	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D
Theria	ANCESTRAL SPECIES	30	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00390000003343
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00900000143153	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00900000143153	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00900000143153	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Primates	ANCESTRAL SPECIES	9	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00940000154434.a.a.f #30	ENSGT00390000000375 #31	ENSGT00730000111317.d #32	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37
Hominoidea	ANCESTRAL SPECIES	23	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00940000154434.a.a.f #30	ENSGT00390000000375 #31	ENSGT00730000111317.d #32	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00940000154434.a.a.f #30	ENSGT00390000000375 #31	ENSGT00730000111317.d #32	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00940000154434.a.a.f #30	ENSGT00390000000375 #31	ENSGT00730000111317.d #32	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37
Homo/Pan group	ANCESTRAL SPECIES	27	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00940000154434.a.a.f #30	ENSGT00390000000375 #31	ENSGT00730000111317.d #32	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37
Pan	ANCESTRAL SPECIES	26	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00940000154434.a.a.f #30	ENSGT00390000000375 #31	ENSGT00730000111317.d #32	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37
Chimpanzee	MODERN SPECIES	22	DMRT3 (ENSPTRG00000020729) #7	DMRT2 (ENSPTRG00000020730) #8	SMARCA2 (ENSPTRG00000051168) #9	ENSPTRG00000052144 #10	ENSPTRG00000047815 #11	VLDLR (ENSPTRG00000020732) #12	KCNV2 (ENSPTRG00000020734) #13	PUM3 (ENSPTRG00000020735) #14	ENSPTRG00000046907 #15	RFX3 (ENSPTRG00000048670) #16	ENSPTRG00000050873 #17	GLIS3 (ENSPTRG00000020738) #18	SLC1A1 (ENSPTRG00000020739) #19	SPATA6L (ENSPTRG00000020740) #20	PLPP6 (ENSPTRG00000044921) #21	CDC37L1 (ENSPTRG00000020741) #22	AK3 (ENSPTRG00000020742) #23	RCL1 (ENSPTRG00000020743) #24	JAK2 (ENSPTRG00000020744) #25	ENSPTRG00000052532 #26	INSL6 (ENSPTRG00000020748) #27	INSL4 (ENSPTRG00000020750) #28	RLN2 (ENSPTRG00000045482) #29	RLN1 (ENSPTRG00000050353) #30	PLGRKT (ENSPTRG00000020753) #31	ENSPTRG00000046654 #32	CD274 (ENSPTRG00000020755) #33	PDCD1LG2 (ENSPTRG00000020756) #34	RIC1 (ENSPTRG00000020757) #35	ERMP1 (ENSPTRG00000020760) #36	MLANA (ENSPTRG00000020761) #37
Bonobo	MODERN SPECIES	22	DMRT1 (ENSPPAG00000036830)	ENSPPAG00000027768 #7	DMRT2 (ENSPPAG00000033739) #8	SMARCA2 (ENSPPAG00000038717) #9	ENSPPAG00000042332 #10	ENSPPAG00000042393 #11	VLDLR (ENSPPAG00000029389) #12	KCNV2 (ENSPPAG00000040791) #13	PUM3 (ENSPPAG00000041337) #14	ENSPPAG00000029157 #15	RFX3 (ENSPPAG00000039978) #16	ENSPPAG00000011368 #17	GLIS3 (ENSPPAG00000043097) #18	SLC1A1 (ENSPPAG00000027502) #19	SPATA6L (ENSPPAG00000010175) #20	CDC37L1 (ENSPPAG00000038614) #22	AK3 (ENSPPAG00000033568) #23	RCL1 (ENSPPAG00000037958) #24	JAK2 (ENSPPAG00000019000) #25	ENSPPAG00000038776 #26	INSL6 (ENSPPAG00000002535) #27	RLN2 (ENSPPAG00000025312) #29	RLN1 (ENSPPAG00000029999) #30	PLGRKT (ENSPPAG00000030588) #31	ENSPPAG00000031342 #32	CD274 (ENSPPAG00000034663) #33	PDCD1LG2 (ENSPPAG00000030710) #34	RIC1 (ENSPPAG00000039773) #35	ERMP1 (ENSPPAG00000039739) #36	MLANA (ENSPPAG00000038099) #37	KIAA2026 (ENSPPAG00000011370)
Human	MODERN SPECIES	21	ZNG1A (ENSG00000172785)	DOCK8 (ENSG00000107099)	KANK1 (ENSG00000107104)	DMRT1 (ENSG00000137090)	DMRT3 (ENSG00000064218) #7	DMRT2 (ENSG00000173253) #8	SMARCA2 (ENSG00000080503) #9	VLDLR (ENSG00000147852) #12	KCNV2 (ENSG00000168263) #13	PUM3 (ENSG00000080608) #14	RFX3 (ENSG00000080298) #16	GLIS3 (ENSG00000107249) #18	SLC1A1 (ENSG00000106688) #19	SPATA6L (ENSG00000106686) #20	PLPP6 (ENSG00000205808) #21	CDC37L1 (ENSG00000106993) #22	AK3 (ENSG00000147853) #23	RCL1 (ENSG00000120158) #24	JAK2 (ENSG00000096968) #25	INSL6 (ENSG00000120210) #27	INSL4 (ENSG00000120211) #28	RLN2 (ENSG00000107014) #29	RLN1 (ENSG00000107018) #30	PLGRKT (ENSG00000107020) #31	CD274 (ENSG00000120217) #33	PDCD1LG2 (ENSG00000197646) #34	RIC1 (ENSG00000107036) #35	ERMP1 (ENSG00000099219) #36	KIAA2026 (ENSG00000183354)	MLANA (ENSG00000120215) #37	RANBP6 (ENSG00000137040)
Gorilla	MODERN SPECIES	22	DMRT1 (ENSGGOG00000013298)	DMRT3 (ENSGGOG00000013303) #7	DMRT2 (ENSGGOG00000025101) #8	ENSGGOG00000039224 #10	SMARCA2 (ENSGGOG00000000513) #9	ENSGGOG00000038609 #11	VLDLR (ENSGGOG00000001362) #12	KCNV2 (ENSGGOG00000000231) #13	PUM3 (ENSGGOG00000006143) #14	ENSGGOG00000022372 #15	RFX3 (ENSGGOG00000003805) #16	GLIS3 (ENSGGOG00000038970) #18	SLC1A1 (ENSGGOG00000000262) #19	PLPP6 (ENSGGOG00000040149) #21	SPATA6L (ENSGGOG00000034964) #20	CDC37L1 (ENSGGOG00000006889) #22	AK3 (ENSGGOG00000028122) #23	RCL1 (ENSGGOG00000015041) #24	ENSGGOG00000022573 #26	JAK2 (ENSGGOG00000007243) #25	INSL6 (ENSGGOG00000008771) #27	INSL4 (ENSGGOG00000036799) #28	RLN2 (ENSGGOG00000026430) #29	RLN1 (ENSGGOG00000005891) #30	PLGRKT (ENSGGOG00000004113) #31	CD274 (ENSGGOG00000008540) #33	PDCD1LG2 (ENSGGOG00000001681) #34	RIC1 (ENSGGOG00000004550) #35	ERMP1 (ENSGGOG00000001865) #36	MLANA (ENSGGOG00000016251) #37	KIAA2026 (ENSGGOG00000028212)
Orangutan	MODERN SPECIES	22	KANK1 (ENSPPYG00000019262)	DMRT1 (ENSPPYG00000019261)	DMRT3 (ENSPPYG00000019260) #7	DMRT2 (ENSPPYG00000035747) #8	SMARCA2 (ENSPPYG00000019258) #9	ENSPPYG00000041078 #11	VLDLR (ENSPPYG00000019257) #12	KCNV2 (ENSPPYG00000019256) #13	PUM3 (ENSPPYG00000019255) #14	ENSPPYG00000019254 #15	RFX3 (ENSPPYG00000019253) #16	GLIS3 (ENSPPYG00000019250) #18	SLC1A1 (ENSPPYG00000019249) #19	PLPP6 (ENSPPYG00000019248) #21	SPATA6L (ENSPPYG00000019247) #20	CDC37L1 (ENSPPYG00000019246) #22	AK3 (ENSPPYG00000019245) #23	RCL1 (ENSPPYG00000019244) #24	JAK2 (ENSPPYG00000019243) #25	INSL6 (ENSPPYG00000019242) #27	INSL4 (ENSPPYG00000019240) #28	RLN2 (ENSPPYG00000040733) #29	RLN1 (ENSPPYG00000019239) #30	PLGRKT (ENSPPYG00000019238) #31	CD274 (ENSPPYG00000019237) #33	PDCD1LG2 (ENSPPYG00000019236) #34	RIC1 (ENSPPYG00000019235) #35	ERMP1 (ENSPPYG00000019234) #36	MLANA (ENSPPYG00000019233) #37	KIAA2026 (ENSPPYG00000029402)	ENSPPYG00000032896
Gibbon	MODERN SPECIES	10	DMRT2 (ENSNLEG00000008564) #8	SMARCA2 (ENSNLEG00000008575) #9	ENSNLEG00000029055 #10	ENSNLEG00000008695 #11	VLDLR (ENSNLEG00000008596) #12	KCNV2 (ENSNLEG00000008701) #13	PUM3 (ENSNLEG00000008712) #14	ENSNLEG00000029981 #15	RFX3 (ENSNLEG00000008785) #16	ENSNLEG00000028743 #17	ENSNLEG00000034817 #18	ENSNLEG00000035119 #18	SLC1A1 (ENSNLEG00000031411) #19	SPATA6L (ENSNLEG00000008860) #20	ENSNLEG00000028049 #21	CDC37L1 (ENSNLEG00000008879) #22	AK3 (ENSNLEG00000008885) #23	RCL1 (ENSNLEG00000008891) #24	JAK2 (ENSNLEG00000008897) #25	ENSNLEG00000027963 #26	INSL6 (ENSNLEG00000008974) #27	INSL4 (ENSNLEG00000008978) #28	RLN2 (ENSNLEG00000008980) #29	RLN1 (ENSNLEG00000008986) #30	PLGRKT (ENSNLEG00000008991) #31	ENSNLEG00000028615 #32	CD274 (ENSNLEG00000009009) #33	PDCD1LG2 (ENSNLEG00000009028) #34	RIC1 (ENSNLEG00000009045) #35	ERMP1 (ENSNLEG00000009085) #36	MLANA (ENSNLEG00000009096) #37
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00940000154318.B.i.b	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00940000160907 #21	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00390000000375 #31	ENSGT00730000111317.d #32	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00940000154318.B.i.b	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00390000000375 #31	ENSGT00730000111317.d #32	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483
Vervet Monkey	MODERN SPECIES	3	DOCK8 (ENSCSAG00000008591)	KANK1 (ENSCSAG00000008611)	DMRT1 (ENSCSAG00000008623)	DMRT3 (ENSCSAG00000008627) #7	DMRT2 (ENSCSAG00000008632) #8	SMARCA2 (ENSCSAG00000008650) #9	ENSCSAG00000008657	VLDLR (ENSCSAG00000008671) #12	KCNV2 (ENSCSAG00000008677) #13	PUM3 (ENSCSAG00000008691) #14	RFX3 (ENSCSAG00000008704) #16	ENSCSAG00000008711 #18	SLC1A1 (ENSCSAG00000008723) #19	PLPP6 (ENSCSAG00000018491) #21	SPATA6L (ENSCSAG00000008768) #20	CDC37L1 (ENSCSAG00000008790) #22	AK3 (ENSCSAG00000008801) #23	RCL1 (ENSCSAG00000008811) #24	JAK2 (ENSCSAG00000008828) #25	INSL6 (ENSCSAG00000008855) #27	INSL4 (ENSCSAG00000008859) #28	RLN2 (ENSCSAG00000008867) #29	PLGRKT (ENSCSAG00000008877) #31	CD274 (ENSCSAG00000008879) #33	PDCD1LG2 (ENSCSAG00000008883) #34	RIC1 (ENSCSAG00000008890) #35	ERMP1 (ENSCSAG00000008897) #36	MLANA (ENSCSAG00000008907) #37	KIAA2026 (ENSCSAG00000008912)	RANBP6 (ENSCSAG00000018489)	IL33 (ENSCSAG00000008936)
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00940000154318.B.i.b	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00940000159989.h	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00940000154937.s.b	ENSGT00390000000375 #31	ENSGT00730000111317.d #32	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37
Macaca	ANCESTRAL SPECIES	10	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00940000154318.B.i.b	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00940000159989.h	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00940000154937.s.b	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT01100000264112.b.a	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00940000160907 #21	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00940000154937.s.b	ENSGT00990000207287	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483
Rhesus	MODERN SPECIES	6	ENSMMUG00000064601	KANK1 (ENSMMUG00000019862)	ENSMMUG00000061012	DMRT3 (ENSMMUG00000044083) #7	DMRT2 (ENSMMUG00000014844) #8	ENSMMUG00000051059	SMARCA2 (ENSMMUG00000015279) #9	VLDLR (ENSMMUG00000015093) #12	KCNV2 (ENSMMUG00000060949) #13	PUM3 (ENSMMUG00000002362) #14	RFX3 (ENSMMUG00000000802) #16	GLIS3 (ENSMMUG00000057568) #18	SLC1A1 (ENSMMUG00000000135) #19	PLPP6 (ENSMMUG00000059411) #21	SPATA6L (ENSMMUG00000000136) #20	CDC37L1 (ENSMMUG00000000141) #22	AK3 (ENSMMUG00000000143) #23	RCL1 (ENSMMUG00000057331) #24	JAK2 (ENSMMUG00000014558) #25	INSL6 (ENSMMUG00000065127) #27	INSL4 (ENSMMUG00000058221) #28	RLN2 (ENSMMUG00000047971) #29	ENSMMUG00000057739	ENSMMUG00000060737	CD274 (ENSMMUG00000012235) #33	PLGRKT (ENSMMUG00000006197) #31	PDCD1LG2 (ENSMMUG00000017991) #34	ENSMMUG00000063608	RIC1 (ENSMMUG00000009020) #35	ERMP1 (ENSMMUG00000005469) #36	MLANA (ENSMMUG00000056663) #37
Crab-eating macaque	MODERN SPECIES	6	DMRT3 (ENSMFAG00000045391) #7	DMRT2 (ENSMFAG00000040812) #8	ENSMFAG00000058821 #9	ENSMFAG00000056188 #10	ENSMFAG00000003814 #9	ENSMFAG00000048099	VLDLR (ENSMFAG00000032374) #12	KCNV2 (ENSMFAG00000055892) #13	PUM3 (ENSMFAG00000001430) #14	ENSMFAG00000049201	RFX3 (ENSMFAG00000000237) #16	ENSMFAG00000049557	ENSMFAG00000030908 #18	SLC1A1 (ENSMFAG00000038163) #19	SPATA6L (ENSMFAG00000032285) #20	CDC37L1 (ENSMFAG00000000879) #22	AK3 (ENSMFAG00000041698) #23	ENSMFAG00000049440	RCL1 (ENSMFAG00000037906) #24	JAK2 (ENSMFAG00000003627) #25	ENSMFAG00000054197	INSL6 (ENSMFAG00000027620) #27	INSL4 (ENSMFAG00000050840) #28	RLN2 (ENSMFAG00000060189) #29	ENSMFAG00000038755	ENSMFAG00000062108	PLGRKT (ENSMFAG00000000751) #31	ENSMFAG00000048939	CD274 (ENSMFAG00000044358) #33	PDCD1LG2 (ENSMFAG00000042841) #34	RIC1 (ENSMFAG00000032768) #35
Pig-tailed macaque	MODERN SPECIES	182	SMARCA2 (ENSMNEG00000041069) #9	ENSMNEG00000028744	ENSMNEG00000040152	ENSMNEG00000044919 #11	VLDLR (ENSMNEG00000040863) #12	KCNV2 (ENSMNEG00000012723) #13	PUM3 (ENSMNEG00000035288) #14	ENSMNEG00000032248 #15	RFX3 (ENSMNEG00000038188) #16	ENSMNEG00000042708	ENSMNEG00000040313 #17	GLIS3 (ENSMNEG00000032738) #18	SLC1A1 (ENSMNEG00000029913) #19	SPATA6L (ENSMNEG00000044422) #20	PLPP6 (ENSMNEG00000001828) #21	CDC37L1 (ENSMNEG00000030663) #22	AK3 (ENSMNEG00000041876) #23	RCL1 (ENSMNEG00000012288) #24	JAK2 (ENSMNEG00000031180) #25	ENSMNEG00000032986 #26	INSL6 (ENSMNEG00000011366) #27	INSL4 (ENSMNEG00000038309) #28	RLN2 (ENSMNEG00000045554) #29	ENSMNEG00000039597	ENSMNEG00000006679	PLGRKT (ENSMNEG00000035542) #31	CD274 (ENSMNEG00000044065) #33	PDCD1LG2 (ENSMNEG00000022031) #34
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000154318.B.i.b	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00940000159989.h	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00940000154937.s.b	ENSGT00390000000375 #31	ENSGT00730000111317.d #32	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37
Olive baboon	MODERN SPECIES	4	DOCK8 (ENSPANG00000025117)	KANK1 (ENSPANG00000025125)	DMRT1 (ENSPANG00000025124)	DMRT3 (ENSPANG00000025123) #7	DMRT2 (ENSPANG00000025122) #8	SMARCA2 (ENSPANG00000025121) #9	ENSPANG00000042712	VLDLR (ENSPANG00000025120) #12	KCNV2 (ENSPANG00000025119) #13	PUM3 (ENSPANG00000025118) #14	RFX3 (ENSPANG00000025143) #16	ENSPANG00000046940	GLIS3 (ENSPANG00000025157) #18	SLC1A1 (ENSPANG00000025156) #19	SPATA6L (ENSPANG00000025154) #20	CDC37L1 (ENSPANG00000025153) #22	AK3 (ENSPANG00000025152) #23	RCL1 (ENSPANG00000025151) #24	JAK2 (ENSPANG00000025145) #25	ENSPANG00000041678	INSL6 (ENSPANG00000025144) #27	INSL4 (ENSPANG00000051326) #28	RLN2 (ENSPANG00000040000) #29	ENSPANG00000023574	PLGRKT (ENSPANG00000025170) #31	CD274 (ENSPANG00000025169) #33	PDCD1LG2 (ENSPANG00000025172) #34	RIC1 (ENSPANG00000025173) #35	ERMP1 (ENSPANG00000025174) #36	MLANA (ENSPANG00000025182) #37	KIAA2026 (ENSPANG00000025181)
Cercopithecinae_d	ANCESTRAL SPECIES	34	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000154318.B.i.b	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.cb #15	ENSGT01050000244879.a.a.b #16	ENSGT00940000159989.h	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000153498.B.a.a #26	ENSGT00940000154434.b #27	ENSGT00940000154434.a.b #28	ENSGT00940000154434.a.a.e #29	ENSGT00940000154937.s.b	ENSGT00390000000375 #31	ENSGT00730000111317.d #32	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37
Sooty mangabey	MODERN SPECIES	629	DMRT2 (ENSCATG00000032878) #8	SMARCA2 (ENSCATG00000031470) #9	ENSCATG00000034215	ENSCATG00000014393 #11	VLDLR (ENSCATG00000033177) #12	KCNV2 (ENSCATG00000037552) #13	PUM3 (ENSCATG00000024880) #14	ENSCATG00000034924 #15	ENSCATG00000029808	RFX3 (ENSCATG00000034639) #16	ENSCATG00000030409 #17	GLIS3 (ENSCATG00000038488) #18	SLC1A1 (ENSCATG00000039114) #19	PLPP6 (ENSCATG00000022355) #21	SPATA6L (ENSCATG00000043815) #20	CDC37L1 (ENSCATG00000041223) #22	AK3 (ENSCATG00000044404) #23	RCL1 (ENSCATG00000034721) #24	JAK2 (ENSCATG00000024457) #25	INSL6 (ENSCATG00000029369) #27	INSL4 (ENSCATG00000040894) #28	RLN2 (ENSCATG00000039089) #29	ENSCATG00000039027	ENSCATG00000019138	PLGRKT (ENSCATG00000038359) #31	CD274 (ENSCATG00000044292) #33	PDCD1LG2 (ENSCATG00000017898) #34	RIC1 (ENSCATG00000011981) #35	ERMP1 (ENSCATG00000044284) #36	MLANA (ENSCATG00000044699) #37	KIAA2026 (ENSCATG00000030148)
Drill	MODERN SPECIES	978		SMARCA2 (ENSMLEG00000027418) #9	ENSMLEG00000041221	ENSMLEG00000035182 #11	VLDLR (ENSMLEG00000032288) #12	KCNV2 (ENSMLEG00000032357) #13	PUM3 (ENSMLEG00000034820) #14	ENSMLEG00000041919 #15	RFX3 (ENSMLEG00000033860) #16	ENSMLEG00000038681	ENSMLEG00000000662 #17	GLIS3 (ENSMLEG00000040353) #18	SLC1A1 (ENSMLEG00000042172) #19	SPATA6L (ENSMLEG00000034746) #20	PLPP6 (ENSMLEG00000009133) #21	CDC37L1 (ENSMLEG00000014590) #22	AK3 (ENSMLEG00000032869) #23	RCL1 (ENSMLEG00000043088) #24	JAK2 (ENSMLEG00000030814) #25	ENSMLEG00000029968 #26	INSL6 (ENSMLEG00000042955) #27	INSL4 (ENSMLEG00000034989) #28	RLN2 (ENSMLEG00000039515) #29	ENSMLEG00000035630	PLGRKT (ENSMLEG00000042174) #31	ENSMLEG00000042007 #32	CD274 (ENSMLEG00000031295) #33	PDCD1LG2 (ENSMLEG00000021844) #34	RIC1 (ENSMLEG00000032920) #35	ERMP1 (ENSMLEG00000033422) #36	MLANA (ENSMLEG00000029385) #37
Rhinopithecus	ANCESTRAL SPECIES	547										ENSGT01050000244879.a.a.b #16	ENSGT00910000146957 #17	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00940000160907 #21	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24
Black snub-nosed monkey	MODERN SPECIES	1532													SLC1A1 (ENSRBIG00000035099) #19	PLPP6 (ENSRBIG00000001345) #21	SPATA6L (ENSRBIG00000032203) #20	CDC37L1 (ENSRBIG00000040333) #22	AK3 (ENSRBIG00000031255) #23	RCL1 (ENSRBIG00000035818) #24
Golden snub-nosed monkey	MODERN SPECIES	768										RFX3 (ENSRROG00000033247) #16	ENSRROG00000033006 #17	GLIS3 (ENSRROG00000031282) #18	SLC1A1 (ENSRROG00000032409) #19	PLPP6 (ENSRROG00000013349) #21	SPATA6L (ENSRROG00000029293) #20	CDC37L1 (ENSRROG00000036422) #22	AK3 (ENSRROG00000036255) #23	RCL1 (ENSRROG00000029781) #24
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00390000008296.b.a.a
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00940000167431	ENSGT00390000005185
Marmoset	MODERN SPECIES		ENSCJAG00000084547	DMRT3 (ENSCJAG00000063670) #7	DMRT2 (ENSCJAG00000010690) #8	SMARCA2 (ENSCJAG00000010710) #9	ENSCJAG00000042690 #11	VLDLR (ENSCJAG00000010772) #12	KCNV2 (ENSCJAG00000042809) #13	PUM3 (ENSCJAG00000010917) #14	RFX3 (ENSCJAG00000010996) #16	GLIS3 (ENSCJAG00000011083) #18	ENSCJAG00000073768	SLC1A1 (ENSCJAG00000011113) #19	SPATA6L (ENSCJAG00000011136) #20	PLPP6 (ENSCJAG00000063898) #21	AK3 (ENSCJAG00000011188) #23	CDC37L1 (ENSCJAG00000011155) #22	ENSCJAG00000059464	RCL1 (ENSCJAG00000011202) #24	JAK2 (ENSCJAG00000011228) #25	ENSCJAG00000076577	INSL6 (ENSCJAG00000011358) #27	ENSCJAG00000038187 #30	PLGRKT (ENSCJAG00000011374) #31	CD274 (ENSCJAG00000011388) #33	PDCD1LG2 (ENSCJAG00000048652) #34	ENSCJAG00000048011	RIC1 (ENSCJAG00000011447) #35	ERMP1 (ENSCJAG00000011528) #36	MLANA (ENSCJAG00000011596) #37	KIAA2026 (ENSCJAG00000045189)	ENSCJAG00000082309
Cebidae_a	ANCESTRAL SPECIES	92	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00910000146995 #10	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00390000004049.ab #15	ENSGT00530000063402.a.h	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27
Bolivian squirrel monkey	MODERN SPECIES	118	SMARCA2 (ENSSBOG00000034827) #9	ENSSBOG00000020747 #10	VLDLR (ENSSBOG00000031091) #12	KCNV2 (ENSSBOG00000023504) #13	PUM3 (ENSSBOG00000028066) #14	ENSSBOG00000022458 #15	ENSSBOG00000026932	ENSSBOG00000016907	RFX3 (ENSSBOG00000031103) #16	GLIS3 (ENSSBOG00000032997) #18	ENSSBOG00000019687	SLC1A1 (ENSSBOG00000032684) #19	SPATA6L (ENSSBOG00000026985) #20	ENSSBOG00000022998	PLPP6 (ENSSBOG00000019035) #21	CDC37L1 (ENSSBOG00000032737) #22	AK3 (ENSSBOG00000002841) #23	ENSSBOG00000018606	RCL1 (ENSSBOG00000026369) #24
Capuchin	MODERN SPECIES	227		SMARCA2 (ENSCCAG00000030636) #9	ENSCCAG00000032291 #10	ENSCCAG00000024458 #11	VLDLR (ENSCCAG00000034631) #12	KCNV2 (ENSCCAG00000006608) #13	PUM3 (ENSCCAG00000032650) #14	ENSCCAG00000023250 #15	ENSCCAG00000034048	ENSCCAG00000032475	RFX3 (ENSCCAG00000030352) #16	GLIS3 (ENSCCAG00000025272) #18	SLC1A1 (ENSCCAG00000024828) #19	SPATA6L (ENSCCAG00000019855) #20	PLPP6 (ENSCCAG00000017149) #21	CDC37L1 (ENSCCAG00000036002) #22	AK3 (ENSCCAG00000024553) #23	RCL1 (ENSCCAG00000033505) #24	JAK2 (ENSCCAG00000022686) #25	INSL6 (ENSCCAG00000028704) #27
Mas night monkey	MODERN SPECIES	599	DMRT3 (ENSANAG00000027840) #7	DMRT2 (ENSANAG00000020591) #8	ENSANAG00000018592 #10	SMARCA2 (ENSANAG00000026498) #9	ENSANAG00000029407 #11	VLDLR (ENSANAG00000020851) #12	KCNV2 (ENSANAG00000035114) #13	PUM3 (ENSANAG00000024520) #14	ENSANAG00000036903	RFX3 (ENSANAG00000038145) #16	GLIS3 (ENSANAG00000038022) #18	SLC1A1 (ENSANAG00000032125) #19	PLPP6 (ENSANAG00000019076) #21	SPATA6L (ENSANAG00000030395) #20	ENSANAG00000029767	CDC37L1 (ENSANAG00000028426) #22	AK3 (ENSANAG00000037726) #23	RCL1 (ENSANAG00000037372) #24	JAK2 (ENSANAG00000027034) #25	ENSANAG00000023659 #30	PLGRKT (ENSANAG00000022854) #31	CD274 (ENSANAG00000028618) #33	ENSANAG00000019149	PDCD1LG2 (ENSANAG00000020809) #34	ENSANAG00000025398	RIC1 (ENSANAG00000037454) #35	ERMP1 (ENSANAG00000034115) #36	MLANA (ENSANAG00000036926) #37	KIAA2026 (ENSANAG00000028777)	ENSANAG00000033312	IL33 (ENSANAG00000019780)
Tarsier	MODERN SPECIES	2085																CDC37L1 (ENSTSYG00000001174) #22	AK3 (ENSTSYG00000001175) #23	RCL1 (ENSTSYG00000009592) #24	ENSTSYG00000028202	JAK2 (ENSTSYG00000010422) #25	INSL6 (ENSTSYG00000003808) #27
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896.q #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Lemuriformes	ANCESTRAL SPECIES	59	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896.q #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Mouse lemur	MODERN SPECIES	1	KANK1 (ENSMICG00000010410)	DMRT1 (ENSMICG00000010417)	DMRT3 (ENSMICG00000044854) #7	DMRT2 (ENSMICG00000010426) #8	SMARCA2 (ENSMICG00000005162) #9	ENSMICG00000005190 #11	VLDLR (ENSMICG00000005182) #12	KCNV2 (ENSMICG00000005193) #13	PUM3 (ENSMICG00000045916) #14	ENSMICG00000029542	RFX3 (ENSMICG00000011871) #16	ENSMICG00000041775 #18	ENSMICG00000031277 #18	SLC1A1 (ENSMICG00000005171) #19	SPATA6L (ENSMICG00000017688) #20	CDC37L1 (ENSMICG00000017690) #22	ENSMICG00000013112 #23	RCL1 (ENSMICG00000015562) #24	JAK2 (ENSMICG00000003885) #25	INSL6 (ENSMICG00000044551) #27	ENSMICG00000043730 #30	PLGRKT (ENSMICG00000031798) #31	CD274 (ENSMICG00000035171) #33	PDCD1LG2 (ENSMICG00000004284) #34	RIC1 (ENSMICG00000016293) #35	ENSMICG00000030745	ERMP1 (ENSMICG00000016329) #36	MLANA (ENSMICG00000048054) #37	KIAA2026 (ENSMICG00000032366)	ENSMICG00000026566	IL33 (ENSMICG00000009247)
Lemuriformes_a	ANCESTRAL SPECIES	86	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896.q #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Greater bamboo lemur	MODERN SPECIES	152	DMRT1 (ENSPSMG00000025222)	DMRT3 (ENSPSMG00000025210) #7	DMRT2 (ENSPSMG00000025206) #8	ENSPSMG00000025195	SMARCA2 (ENSPSMG00000025173) #9	ENSPSMG00000025075 #11	VLDLR (ENSPSMG00000025041) #12	KCNV2 (ENSPSMG00000024960) #13	ENSPSMG00000024956 #14	ENSPSMG00000024950	RFX3 (ENSPSMG00000024938) #16	GLIS3 (ENSPSMG00000024897) #18	SLC1A1 (ENSPSMG00000024890) #19	PLPP6 (ENSPSMG00000024881) #21	SPATA6L (ENSPSMG00000024878) #20	CDC37L1 (ENSPSMG00000024864) #22	AK3 (ENSPSMG00000024859) #23	RCL1 (ENSPSMG00000024848) #24	JAK2 (ENSPSMG00000024838) #25	ENSPSMG00000024795	INSL6 (ENSPSMG00000024793) #27	ENSPSMG00000024791 #30	PLGRKT (ENSPSMG00000024787) #31	CD274 (ENSPSMG00000024783) #33	PDCD1LG2 (ENSPSMG00000024781) #34
Coquerels sifaka	MODERN SPECIES	549					SMARCA2 (ENSPCOG00000025709) #9	ENSPCOG00000026110	ENSPCOG00000019796 #11	VLDLR (ENSPCOG00000026506) #12	KCNV2 (ENSPCOG00000023607) #13	PUM3 (ENSPCOG00000027325) #14	RFX3 (ENSPCOG00000022172) #16	GLIS3 (ENSPCOG00000022619) #18	SLC1A1 (ENSPCOG00000013653) #19	SPATA6L (ENSPCOG00000001879) #20	PLPP6 (ENSPCOG00000013586) #21	CDC37L1 (ENSPCOG00000025983) #22	ENSPCOG00000024436 #23	RCL1 (ENSPCOG00000009611) #24
Bushbaby	MODERN SPECIES	121	ENSOGAG00000031226	KANK1 (ENSOGAG00000001985)	DMRT1 (ENSOGAG00000001989)	DMRT3 (ENSOGAG00000026565) #7	DMRT2 (ENSOGAG00000001994) #8	ENSOGAG00000025218	SMARCA2 (ENSOGAG00000017053) #9	VLDLR (ENSOGAG00000013312) #12	KCNV2 (ENSOGAG00000030433) #13	ENSOGAG00000008125 #14	RFX3 (ENSOGAG00000007762) #16	GLIS3 (ENSOGAG00000007376) #18	SLC1A1 (ENSOGAG00000007464) #19	PLPP6 (ENSOGAG00000007472) #21	SPATA6L (ENSOGAG00000007468) #20	CDC37L1 (ENSOGAG00000007475) #22	AK3 (ENSOGAG00000007477) #23	RCL1 (ENSOGAG00000007480) #24	JAK2 (ENSOGAG00000012246) #25	ENSOGAG00000009500 #30	PLGRKT (ENSOGAG00000003280) #31	CD274 (ENSOGAG00000003282) #33	PDCD1LG2 (ENSOGAG00000003284) #34	RIC1 (ENSOGAG00000012009) #35	ERMP1 (ENSOGAG00000012020) #36	MLANA (ENSOGAG00000010986) #37	ENSOGAG00000030737	ENSOGAG00000032415	RANBP6 (ENSOGAG00000010992)	ENSOGAG00000004525	TPD52L3 (ENSOGAG00000011718)
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00900000143153	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Tree shrew	MODERN SPECIES	183															ENSTBEG00000006755 #20	CDC37L1 (ENSTBEG00000007827) #22	AK3 (ENSTBEG00000008054) #23
Glires	ANCESTRAL SPECIES	9	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Lagomorpha	ANCESTRAL SPECIES	68								ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000153064.b.d	ENSGT01050000244818	ENSGT00950000183016.E.b.b	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000167431	ENSGT00390000005185	ENSGT00940000163110	ENSGT00390000008296.b.a.a	ENSGT00390000017970
Rabbit	MODERN SPECIES		ENSOCUG00000022775	VLDLR (ENSOCUG00000002231) #12	KCNV2 (ENSOCUG00000004385) #13	ENSOCUG00000004189 #14	ENSOCUG00000039572	RFX3 (ENSOCUG00000014086) #16	ENSOCUG00000023393	ENSOCUG00000027590	GLIS3 (ENSOCUG00000023004) #18	ENSOCUG00000036407	ENSOCUG00000013264 #19	ENSOCUG00000026987	ENSOCUG00000022202 #19	PLPP6 (ENSOCUG00000003465) #21	SPATA6L (ENSOCUG00000003455) #20	CDC37L1 (ENSOCUG00000003468) #22	ENSOCUG00000011411 #23	ENSOCUG00000013279	RCL1 (ENSOCUG00000008161) #24	JAK2 (ENSOCUG00000016853) #25	ENSOCUG00000037721	INSL6 (ENSOCUG00000013682) #27	ENSOCUG00000031086	ENSOCUG00000037426	ENSOCUG00000030169	ENSOCUG00000038359	ENSOCUG00000030357	ENSOCUG00000025640 #30	PLGRKT (ENSOCUG00000008095) #31	CD274 (ENSOCUG00000008117) #33	ENSOCUG00000032240
Pika	MODERN SPECIES	4916													SLC1A1 (ENSOPRG00000010884) #19	SPATA6L (ENSOPRG00000010908) #20	ENSOPRG00000010928	CDC37L1 (ENSOPRG00000010942) #22	AK3 (ENSOPRG00000010954) #23	RCL1 (ENSOPRG00000010965) #24
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00900000143153	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Marmotini	ANCESTRAL SPECIES	1	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00900000143153	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839.k #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Marmotini_b	ANCESTRAL SPECIES	88	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00900000143153	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27
Squirrel	MODERN SPECIES	103	KANK1 (ENSSTOG00000010218)	DMRT1 (ENSSTOG00000010235)	DMRT3 (ENSSTOG00000023574) #7	DMRT2 (ENSSTOG00000026909) #8	SMARCA2 (ENSSTOG00000006812) #9	ENSSTOG00000031987 #11	VLDLR (ENSSTOG00000006880) #12	KCNV2 (ENSSTOG00000020003) #13	PUM3 (ENSSTOG00000009586) #14	RFX3 (ENSSTOG00000006974) #16	GLIS3 (ENSSTOG00000000302) #18	ENSSTOG00000031708	SLC1A1 (ENSSTOG00000023583) #19	PLPP6 (ENSSTOG00000025831) #21	SPATA6L (ENSSTOG00000000018) #20	CDC37L1 (ENSSTOG00000000020) #22	AK3 (ENSSTOG00000000021) #23	RCL1 (ENSSTOG00000000023) #24	JAK2 (ENSSTOG00000006679) #25	ENSSTOG00000016298 #27
Alpin marmot	MODERN SPECIES	32	ENSMMMG00000003212	SMARCA2 (ENSMMMG00000002811) #9	ENSMMMG00000002785	ENSMMMG00000002765 #11	VLDLR (ENSMMMG00000002594) #12	ENSMMMG00000002572	KCNV2 (ENSMMMG00000002550) #13	PUM3 (ENSMMMG00000002513) #14	ENSMMMG00000002504	GLIS3 (ENSMMMG00000002430) #18	ENSMMMG00000002416	ENSMMMG00000002405	SLC1A1 (ENSMMMG00000002380) #19	SPATA6L (ENSMMMG00000002361) #20	PLPP6 (ENSMMMG00000002356) #21	CDC37L1 (ENSMMMG00000002322) #22	AK3 (ENSMMMG00000002286) #23	RCL1 (ENSMMMG00000002259) #24	JAK2 (ENSMMMG00000002174) #25	ENSMMMG00000002165 #27	ENSMMMG00000002157	ENSMMMG00000002146	ENSMMMG00000002130 #30	PLGRKT (ENSMMMG00000002117) #31	CD274 (ENSMMMG00000002100) #33	PDCD1LG2 (ENSMMMG00000002085) #34	RIC1 (ENSMMMG00000002031) #35	ENSMMMG00000002013 #36	ENSMMMG00000002003 #36	MLANA (ENSMMMG00000001977) #37	KIAA2026 (ENSMMMG00000001950)
Eurasian red squirrel	MODERN SPECIES	6	KANK1 (ENSSVLG00005023807)	DMRT1 (ENSSVLG00005023845)	DMRT3 (ENSSVLG00005023888) #7	DMRT2 (ENSSVLG00005023918) #8	SMARCA2 (ENSSVLG00005024009) #9	ENSSVLG00005024201 #11	VLDLR (ENSSVLG00005024232) #12	KCNV2 (ENSSVLG00005024318) #13	PUM3 (ENSSVLG00005024338) #14	ENSSVLG00005024401	RFX3 (ENSSVLG00005024420) #16	GLIS3 (ENSSVLG00005024543) #18	SLC1A1 (ENSSVLG00005024569) #19	SPATA6L (ENSSVLG00005024615) #20	PLPP6 (ENSSVLG00005024689) #21	CDC37L1 (ENSSVLG00005024699) #22	ENSSVLG00005024721 #23	RCL1 (ENSSVLG00005024752) #24	JAK2 (ENSSVLG00005024808) #25	INSL6 (ENSSVLG00005024849) #27	ENSSVLG00005024871	PLGRKT (ENSSVLG00005024908) #31	CD274 (ENSSVLG00005024930) #33	PDCD1LG2 (ENSSVLG00005024955) #34	RIC1 (ENSSVLG00005025040) #35	ERMP1 (ENSSVLG00005025117) #36	MLANA (ENSSVLG00005025137) #37	KIAA2026 (ENSSVLG00005025155)	ENSSVLG00005025173	ENSSVLG00005025185	ENSSVLG00005025194
Hystricomorpha	ANCESTRAL SPECIES	46	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a.c.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00390000008296.b.a.a	ENSGT00390000017970
Hystricomorpha_a	ANCESTRAL SPECIES	53	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b.d #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00900000143153	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a.c.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00390000008296.b.a.a	ENSGT00390000017970
Hystricomorpha_b	ANCESTRAL SPECIES	71	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b.d #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a.c.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930
Degu	MODERN SPECIES	128	KANK1 (ENSODEG00000004766)	DMRT1 (ENSODEG00000004898)	DMRT3 (ENSODEG00000004984) #7	DMRT2 (ENSODEG00000004992) #8	SMARCA2 (ENSODEG00000005452) #9	ENSODEG00000006378 #11	ENSODEG00000003492 #12	KCNV2 (ENSODEG00000003536) #13	ENSODEG00000003625 #14	RFX3 (ENSODEG00000003682) #16	GLIS3 (ENSODEG00000003731) #18	SLC1A1 (ENSODEG00000003884) #19	ENSODEG00000003949	SPATA6L (ENSODEG00000004066) #20	PLPP6 (ENSODEG00000019026) #21	CDC37L1 (ENSODEG00000004185) #22	ENSODEG00000004121 #23	RCL1 (ENSODEG00000004151) #24	JAK2 (ENSODEG00000004208) #25	ENSODEG00000004220	INSL6 (ENSODEG00000004231) #27	PLGRKT (ENSODEG00000004267) #31	CD274 (ENSODEG00000004298) #33	RIC1 (ENSODEG00000004340) #35	ERMP1 (ENSODEG00000005254) #36	MLANA (ENSODEG00000005368) #37	KIAA2026 (ENSODEG00000005381)	ENSODEG00000019201	RANBP6 (ENSODEG00000019173)	IL33 (ENSODEG00000005417)
Long-tailed chinchilla	MODERN SPECIES	141	KANK1 (ENSCLAG00000015509)	DMRT1 (ENSCLAG00000015238)	DMRT3 (ENSCLAG00000015537) #7	DMRT2 (ENSCLAG00000006168) #8	SMARCA2 (ENSCLAG00000014484) #9	VLDLR (ENSCLAG00000007543) #12	KCNV2 (ENSCLAG00000013226) #13	PUM3 (ENSCLAG00000011892) #14	RFX3 (ENSCLAG00000009044) #16	GLIS3 (ENSCLAG00000008116) #18	ENSCLAG00000009238	SLC1A1 (ENSCLAG00000009832) #19	ENSCLAG00000009476	SPATA6L (ENSCLAG00000010497) #20	PLPP6 (ENSCLAG00000017735) #21	CDC37L1 (ENSCLAG00000005805) #22	AK3 (ENSCLAG00000006329) #23	RCL1 (ENSCLAG00000007445) #24	JAK2 (ENSCLAG00000005091) #25	INSL6 (ENSCLAG00000007423) #27	PLGRKT (ENSCLAG00000008570) #31	CD274 (ENSCLAG00000006370) #33	ENSCLAG00000007197	RIC1 (ENSCLAG00000008085) #35	ERMP1 (ENSCLAG00000004784) #36	MLANA (ENSCLAG00000005918) #37	KIAA2026 (ENSCLAG00000010624)	RANBP6 (ENSCLAG00000017716)	IL33 (ENSCLAG00000008507)	UHRF2 (ENSCLAG00000004646)	GLDC (ENSCLAG00000005815)
Guinea pig	MODERN SPECIES	21	DOCK8 (ENSCPOG00000008366)	KANK1 (ENSCPOG00000008389)	DMRT1 (ENSCPOG00000005909)	DMRT3 (ENSCPOG00000005912) #7	DMRT2 (ENSCPOG00000008452) #8	SMARCA2 (ENSCPOG00000005475) #9	VLDLR (ENSCPOG00000007685) #12	KCNV2 (ENSCPOG00000032893) #13	ENSCPOG00000008552 #14	RFX3 (ENSCPOG00000000900) #16	GLIS3 (ENSCPOG00000005523) #18	ENSCPOG00000030794	SLC1A1 (ENSCPOG00000011151) #19	PLPP6 (ENSCPOG00000012931) #21	SPATA6L (ENSCPOG00000012925) #20	CDC37L1 (ENSCPOG00000030938) #22	AK3 (ENSCPOG00000011927) #23	RCL1 (ENSCPOG00000015354) #24	JAK2 (ENSCPOG00000014653) #25	INSL6 (ENSCPOG00000002694) #27	ENSCPOG00000001365 #30	PLGRKT (ENSCPOG00000012720) #31	CD274 (ENSCPOG00000004371) #33	RIC1 (ENSCPOG00000013425) #35	ERMP1 (ENSCPOG00000013432) #36	MLANA (ENSCPOG00000013436) #37	ENSCPOG00000039570	KIAA2026 (ENSCPOG00000013437)	RANBP6 (ENSCPOG00000005398)	IL33 (ENSCPOG00000030316)	UHRF2 (ENSCPOG00000004838)
Naked mole-rat female	MODERN SPECIES	3	ENSHGLG00000035043	ENSHGLG00000016566	VLDLR (ENSHGLG00000016113) #12	KCNV2 (ENSHGLG00000015810) #13	ENSHGLG00000015868 #14	ENSHGLG00000016314	ENSHGLG00000042585	ENSHGLG00000019207	ENSHGLG00000018913 #16	ENSHGLG00000015091 #18	ENSHGLG00000032696	ENSHGLG00000017534	SLC1A1 (ENSHGLG00000015155) #19	PLPP6 (ENSHGLG00000038858) #21	SPATA6L (ENSHGLG00000018477) #20	CDC37L1 (ENSHGLG00000012329) #22	ENSHGLG00000018975 #23	ENSHGLG00000016452 #24	JAK2 (ENSHGLG00000011890) #25	ENSHGLG00000019539 #30	PLGRKT (ENSHGLG00000037089) #31	CD274 (ENSHGLG00000016786) #33	RIC1 (ENSHGLG00000011155) #35	ERMP1 (ENSHGLG00000018719) #36	ENSHGLG00000034164 #37	KIAA2026 (ENSHGLG00000018909)	RANBP6 (ENSHGLG00000021232)	IL33 (ENSHGLG00000017894)	ENSHGLG00000016359	ENSHGLG00000048843	UHRF2 (ENSHGLG00000015661)
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Kangaroo rat	MODERN SPECIES	359	Tmem252 (ENSDORG00000005477)	Pgm5 (ENSDORG00000005476)	Cbwd1 (ENSDORG00000004917)	Dock8 (ENSDORG00000007203)	Kank1 (ENSDORG00000015159)	ENSDORG00000006363	Dmrt2 (ENSDORG00000007216) #8	Smarca2 (ENSDORG00000014832) #9	Vldlr (ENSDORG00000012954) #12	Kcnv2 (ENSDORG00000011511) #13	ENSDORG00000003628 #14	Rfx3 (ENSDORG00000013906) #16	ENSDORG00000025494 #18	Slc1a1 (ENSDORG00000010091) #19	Plpp6 (ENSDORG00000003071) #21	Cdc37l1 (ENSDORG00000023648) #22	Ak3 (ENSDORG00000010355) #23	Rcl1 (ENSDORG00000015645) #24	Jak2 (ENSDORG00000011552) #25	ENSDORG00000000109 #31	ENSDORG00000028062
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Northern American deer mouse	MODERN SPECIES		Dmrt3 (ENSPEMG00000019990) #7	Dmrt2 (ENSPEMG00000019767) #8	Smarca2 (ENSPEMG00000019821) #9	ENSPEMG00000021666 #11	Vldlr (ENSPEMG00000022250) #12	Kcnv2 (ENSPEMG00000020138) #13	ENSPEMG00000030423	ENSPEMG00000019340 #14	Rfx3 (ENSPEMG00000019731) #16	Glis3 (ENSPEMG00000020002) #18	ENSPEMG00000004286	Slc1a1 (ENSPEMG00000009611) #19	ENSPEMG00000021571	Spata6l (ENSPEMG00000023122) #20	Plpp6 (ENSPEMG00000007181) #21	Cdc37l1 (ENSPEMG00000000344) #22	Ak3 (ENSPEMG00000022781) #23	Rcl1 (ENSPEMG00000023275) #24	Jak2 (ENSPEMG00000022083) #25	ENSPEMG00000023396 #27	Rln1 (ENSPEMG00000022594) #30	Plgrkt (ENSPEMG00000022507) #31	Cd274 (ENSPEMG00000022427) #33	Pdcd1lg2 (ENSPEMG00000021972) #34	Ric1 (ENSPEMG00000022073) #35	Ermp1 (ENSPEMG00000022988) #36	Mlana (ENSPEMG00000004309) #37	9930021J03Rik (ENSPEMG00000008620)	Ranbp6 (ENSPEMG00000013745)	Il33 (ENSPEMG00000010337)	ENSPEMG00000013576
Prairie vole	MODERN SPECIES	16	Dock8 (ENSMOCG00000014249)	Kank1 (ENSMOCG00000020725)	ENSMOCG00000017971	Dmrt3 (ENSMOCG00000015270) #7	Dmrt2 (ENSMOCG00000016701) #8	Smarca2 (ENSMOCG00000001611) #9	Vldlr (ENSMOCG00000004269) #12	Kcnv2 (ENSMOCG00000014872) #13	ENSMOCG00000019519 #14	Rfx3 (ENSMOCG00000018931) #16	Glis3 (ENSMOCG00000009953) #18	Slc1a1 (ENSMOCG00000017507) #19	ENSMOCG00000018225	Spata6l (ENSMOCG00000022082) #20	Plpp6 (ENSMOCG00000001135) #21	Cdc37l1 (ENSMOCG00000018341) #22	Ak3 (ENSMOCG00000010856) #23	Rcl1 (ENSMOCG00000012145) #24	Jak2 (ENSMOCG00000013580) #25	Insl6 (ENSMOCG00000015208) #27	Rln1 (ENSMOCG00000012108) #30	Plgrkt (ENSMOCG00000013870) #31	Cd274 (ENSMOCG00000016738) #33	Pdcd1lg2 (ENSMOCG00000002927) #34	Ric1 (ENSMOCG00000018339) #35	ENSMOCG00000019292 #36	Mlana (ENSMOCG00000005161) #37	9930021J03Rik (ENSMOCG00000020946)	Ranbp6 (ENSMOCG00000010374)	Il33 (ENSMOCG00000012740)	Uhrf2 (ENSMOCG00000000695)
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Chinese hamster chok1gshd	MODERN SPECIES	401	Kank1 (ENSCGRG00001020355)	Dmrt1 (ENSCGRG00001000625)	Dmrt3 (ENSCGRG00001005036) #7	Dmrt2 (ENSCGRG00001007562) #8	Smarca2 (ENSCGRG00001002323) #9	Vldlr (ENSCGRG00001014399) #12	ENSCGRG00001017895 #11	Kcnv2 (ENSCGRG00001018140) #13	Pum3 (ENSCGRG00001016402) #14	Rfx3 (ENSCGRG00001021745) #16	Glis3 (ENSCGRG00001014233) #18	Slc1a1 (ENSCGRG00001022336) #19	ENSCGRG00001023585	Spata6l (ENSCGRG00001002881) #20	Plpp6 (ENSCGRG00001012981) #21	Cdc37l1 (ENSCGRG00001000264) #22	AK3 (ENSCGRG00001007296) #23	Rcl1 (ENSCGRG00001013748) #24	Jak2 (ENSCGRG00001015840) #25	Insl6 (ENSCGRG00001020673) #27	Plgrkt (ENSCGRG00001023695) #31	Cd274 (ENSCGRG00001024294) #33	ENSCGRG00001013276	Pdcd1lg2 (ENSCGRG00001015183) #34	Ric1 (ENSCGRG00001016728) #35	Ermp1 (ENSCGRG00001021468) #36	Mlana (ENSCGRG00001024579) #37	9930021J03Rik (ENSCGRG00001008137)	Ranbp6 (ENSCGRG00001012447)	Il33 (ENSCGRG00001014000)	Trpd52l3 (ENSCGRG00001011832)
Golden Hamster	MODERN SPECIES	617	ENSMAUG00000009191	Kank1 (ENSMAUG00000009263)	ENSMAUG00000008975	Dmrt3 (ENSMAUG00000008904) #7	Dmrt2 (ENSMAUG00000010038) #8	ENSMAUG00000010070 #9	ENSMAUG00000008807 #9	ENSMAUG00000008613 #9	ENSMAUG00000008768	Kcnv2 (ENSMAUG00000008727) #13	Pum3 (ENSMAUG00000009733) #14	Rfx3 (ENSMAUG00000009987) #16	Slc1a1 (ENSMAUG00000009046) #19	Plpp6 (ENSMAUG00000001915) #21	Spata6l (ENSMAUG00000010530) #20	Cdc37l1 (ENSMAUG00000008847) #22	Ak3 (ENSMAUG00000008253) #23	Rcl1 (ENSMAUG00000008922) #24	Jak2 (ENSMAUG00000008571) #25	Insl6 (ENSMAUG00000008553) #27	Rln1 (ENSMAUG00000008598) #30	Plgrkt (ENSMAUG00000007601) #31	Cd274 (ENSMAUG00000008788) #33	Pdcd1lg2 (ENSMAUG00000007055) #34	Ric1 (ENSMAUG00000008752) #35	Ermp1 (ENSMAUG00000008682) #36	Mlana (ENSMAUG00000006750) #37	9930021J03Rik (ENSMAUG00000009640)	Ranbp6 (ENSMAUG00000002166)	ENSMAUG00000010025	Uhrf2 (ENSMAUG00000008237)
Murinae	ANCESTRAL SPECIES		ENSGT00940000154886.a.a	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Mus	ANCESTRAL SPECIES		ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00900000143396	ENSGT00940000155460 #12	ENSGT00520000061590 #11	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00900000143396	ENSGT00940000155460 #12	ENSGT00520000061590 #11	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00900000143396	ENSGT00940000155460 #12	ENSGT00520000061590 #11	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Mus_C	ANCESTRAL SPECIES	24	ENSGT00940000156489.n	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00900000143396	ENSGT00940000155460 #12	ENSGT00520000061590 #11	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00900000143153	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Steppe mouse	MODERN SPECIES	3342												Slc1a1 (ENSMSIG00000024962) #19	ENSMSIG00000024973	Spata6l (ENSMSIG00000024987) #20	Plpp6 (ENSMSIG00000025080) #21	Cdc37l1 (ENSMSIG00000025086) #22	ENSMSIG00000025242	Ak3 (ENSMSIG00000025266) #23	Rcl1 (ENSMSIG00000025273) #24	Jak2 (ENSMSIG00000025287) #25	Insl6 (ENSMSIG00000025305) #27	Rln1 (ENSMSIG00000025309) #30	Plgrkt (ENSMSIG00000025313) #31	Cd274 (ENSMSIG00000025326) #33	Pdcd1lg2 (ENSMSIG00000025335) #34	Ric1 (ENSMSIG00000025350) #35	Ermp1 (ENSMSIG00000025448) #36	Mlana (ENSMSIG00000025512) #37	9930021J03Rik (ENSMSIG00000025540)	Ranbp6 (ENSMSIG00000025595)	Il33 (ENSMSIG00000025601)
spretus	MODERN SPECIES	10	Cbwd1 (MGP_SPRETEiJ_G0023754)	Dock8 (MGP_SPRETEiJ_G0023755)	Kank1 (MGP_SPRETEiJ_G0023756)	Dmrt3 (MGP_SPRETEiJ_G0023757) #7	Dmrt2 (MGP_SPRETEiJ_G0023758) #8	Smarca2 (MGP_SPRETEiJ_G0023759) #9	MGP_SPRETEiJ_G0023760	Vldlr (MGP_SPRETEiJ_G0023761) #12	Kcnv2 (MGP_SPRETEiJ_G0023762) #13	Pum3 (MGP_SPRETEiJ_G0023763) #14	Rfx3 (MGP_SPRETEiJ_G0023764) #16	Glis3 (MGP_SPRETEiJ_G0023765) #18	Slc1a1 (MGP_SPRETEiJ_G0023766) #19	Spata6l (MGP_SPRETEiJ_G0023767) #20	Plpp6 (MGP_SPRETEiJ_G0023768) #21	Cdc37l1 (MGP_SPRETEiJ_G0023769) #22	Ak3 (MGP_SPRETEiJ_G0023770) #23	Rcl1 (MGP_SPRETEiJ_G0023771) #24	Jak2 (MGP_SPRETEiJ_G0023772) #25	Insl6 (MGP_SPRETEiJ_G0023773) #27	Rln1 (MGP_SPRETEiJ_G0023774) #30	Plgrkt (MGP_SPRETEiJ_G0023775) #31	Cd274 (MGP_SPRETEiJ_G0023776) #33	Pdcd1lg2 (MGP_SPRETEiJ_G0023777) #34	Ric1 (MGP_SPRETEiJ_G0023778) #35	Ermp1 (MGP_SPRETEiJ_G0023779) #36	Mlana (MGP_SPRETEiJ_G0023780) #37	9930021J03Rik (MGP_SPRETEiJ_G0023781)	Ranbp6 (MGP_SPRETEiJ_G0023782)	Il33 (MGP_SPRETEiJ_G0023783)	Trpd52l3 (MGP_SPRETEiJ_G0023784)
Mouse	MODERN SPECIES	10	Dock8 (ENSMUSG00000052085)	Kank1 (ENSMUSG00000032702)	Dmrt1 (ENSMUSG00000024837)	Dmrt3 (ENSMUSG00000042372) #7	Dmrt2 (ENSMUSG00000048138) #8	Smarca2 (ENSMUSG00000024921) #9	Gm815 (ENSMUSG00000074913)	Vldlr (ENSMUSG00000024924) #12	Kcnv2 (ENSMUSG00000047298) #13	Pum3 (ENSMUSG00000041360) #14	Rfx3 (ENSMUSG00000040929) #16	Glis3 (ENSMUSG00000052942) #18	Slc1a1 (ENSMUSG00000024935) #19	Spata6l (ENSMUSG00000064202) #20	Plpp6 (ENSMUSG00000040105) #21	Cdc37l1 (ENSMUSG00000024780) #22	Ak3 (ENSMUSG00000024782) #23	Rcl1 (ENSMUSG00000024785) #24	Jak2 (ENSMUSG00000024789) #25	Insl6 (ENSMUSG00000050957) #27	Rln1 (ENSMUSG00000039097) #30	Plgrkt (ENSMUSG00000016495) #31	Cd274 (ENSMUSG00000016496) #33	Pdcd1lg2 (ENSMUSG00000016498) #34	Ric1 (ENSMUSG00000038658) #35	Ermp1 (ENSMUSG00000046324) #36	Mlana (ENSMUSG00000024806) #37	9930021J03Rik (ENSMUSG00000046138)	Ranbp6 (ENSMUSG00000074909)	Il33 (ENSMUSG00000024810)	Trpd52l3 (ENSMUSG00000024815)
Ryukyu mouse	MODERN SPECIES	10	Dock8 (MGP_CAROLIEiJ_G0022836)	Kank1 (MGP_CAROLIEiJ_G0022837)	Dmrt1 (MGP_CAROLIEiJ_G0022838)	Dmrt3 (MGP_CAROLIEiJ_G0022839) #7	Dmrt2 (MGP_CAROLIEiJ_G0022840) #8	Smarca2 (MGP_CAROLIEiJ_G0022841) #9	MGP_CAROLIEiJ_G0022842	Vldlr (MGP_CAROLIEiJ_G0022843) #12	Kcnv2 (MGP_CAROLIEiJ_G0022844) #13	Pum3 (MGP_CAROLIEiJ_G0022845) #14	Rfx3 (MGP_CAROLIEiJ_G0022846) #16	Glis3 (MGP_CAROLIEiJ_G0022847) #18	Slc1a1 (MGP_CAROLIEiJ_G0022848) #19	Spata6l (MGP_CAROLIEiJ_G0022849) #20	Plpp6 (MGP_CAROLIEiJ_G0022850) #21	Cdc37l1 (MGP_CAROLIEiJ_G0022851) #22	Ak3 (MGP_CAROLIEiJ_G0022852) #23	Rcl1 (MGP_CAROLIEiJ_G0022853) #24	Jak2 (MGP_CAROLIEiJ_G0022854) #25	Insl6 (MGP_CAROLIEiJ_G0022855) #27	Rln1 (MGP_CAROLIEiJ_G0022856) #30	Plgrkt (MGP_CAROLIEiJ_G0022857) #31	Cd274 (MGP_CAROLIEiJ_G0022858) #33	Pdcd1lg2 (MGP_CAROLIEiJ_G0022859) #34	Ric1 (MGP_CAROLIEiJ_G0022860) #35	Ermp1 (MGP_CAROLIEiJ_G0022861) #36	Mlana (MGP_CAROLIEiJ_G0022862) #37	9930021J03Rik (MGP_CAROLIEiJ_G0022863)	Ranbp6 (MGP_CAROLIEiJ_G0022864)	Il33 (MGP_CAROLIEiJ_G0022865)	Trpd52l3 (MGP_CAROLIEiJ_G0022866)
Shrew mouse	MODERN SPECIES		Dock8 (MGP_PahariEiJ_G0014329)	Kank1 (MGP_PahariEiJ_G0014330)	Dmrt1 (MGP_PahariEiJ_G0014331)	Dmrt3 (MGP_PahariEiJ_G0014332) #7	Dmrt2 (MGP_PahariEiJ_G0014333) #8	Smarca2 (MGP_PahariEiJ_G0014334) #9	MGP_PahariEiJ_G0014335	Vldlr (MGP_PahariEiJ_G0014336) #12	Kcnv2 (MGP_PahariEiJ_G0014337) #13	Pum3 (MGP_PahariEiJ_G0014338) #14	Rfx3 (MGP_PahariEiJ_G0014339) #16	Glis3 (MGP_PahariEiJ_G0014340) #18	Slc1a1 (MGP_PahariEiJ_G0014341) #19	Spata6l (MGP_PahariEiJ_G0014342) #20	Plpp6 (MGP_PahariEiJ_G0014343) #21	Cdc37l1 (MGP_PahariEiJ_G0014344) #22	Ak3 (MGP_PahariEiJ_G0014345) #23	Rcl1 (MGP_PahariEiJ_G0014346) #24	Jak2 (MGP_PahariEiJ_G0014347) #25	Insl6 (MGP_PahariEiJ_G0014348) #27	Rln1 (MGP_PahariEiJ_G0014349) #30	MGP_PahariEiJ_G0014350	Cd274 (MGP_PahariEiJ_G0014351) #33	Pdcd1lg2 (MGP_PahariEiJ_G0014352) #34	Ric1 (MGP_PahariEiJ_G0014353) #35	Ermp1 (MGP_PahariEiJ_G0014354) #36	Mlana (MGP_PahariEiJ_G0014355) #37	9930021J03Rik (MGP_PahariEiJ_G0014356)	Ranbp6 (MGP_PahariEiJ_G0014357)	Il33 (MGP_PahariEiJ_G0014358)	Trpd52l3 (MGP_PahariEiJ_G0014359)
Rat	MODERN SPECIES		ENSRNOG00000062555	Smarca2 (ENSRNOG00000011931) #9	ENSRNOG00000069446 #11	Vldlr (ENSRNOG00000027491) #12	ENSRNOG00000062591	Kcnv2 (ENSRNOG00000012566) #13	Pum3 (ENSRNOG00000012574) #14	Rfx3 (ENSRNOG00000014486) #16	ENSRNOG00000066761	Glis3 (ENSRNOG00000014768) #18	Slc1a1 (ENSRNOG00000014816) #19	ENSRNOG00000065811	Spata6l (ENSRNOG00000015137) #20	Plpp6 (ENSRNOG00000015268) #21	RGD1565057 (ENSRNOG00000069618)	Cdc37l1 (ENSRNOG00000010967) #22	Ak3 (ENSRNOG00000052506) #23	Rcl1 (ENSRNOG00000015491) #24	Jak2 (ENSRNOG00000059968) #25	Insl6 (ENSRNOG00000015868) #27	Rln1 (ENSRNOG00000060867) #30	Plgrkt (ENSRNOG00000015932) #31	Cd274 (ENSRNOG00000016112) #33	Pdcd1lg2 (ENSRNOG00000016136) #34	Ric1 (ENSRNOG00000016172) #35	Ermp1 (ENSRNOG00000010915) #36	Mlana (ENSRNOG00000036608) #37	RGD1311595 (ENSRNOG00000026942)	Ranbp6 (ENSRNOG00000053859)	Il33 (ENSRNOG00000016456)	Tpd52l3 (ENSRNOG00000042441)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1166	Dmrt1 (ENSNGAG00000001295)	Dmrt3 (ENSNGAG00000020423) #7	Dmrt2 (ENSNGAG00000020041) #8	ENSNGAG00000013866	Smarca2 (ENSNGAG00000000108) #9	ENSNGAG00000012912	Vldlr (ENSNGAG00000003966) #12	Kcnv2 (ENSNGAG00000020439) #13	Pum3 (ENSNGAG00000019468) #14	Rfx3 (ENSNGAG00000016470) #16	Glis3 (ENSNGAG00000006111) #18	ENSNGAG00000018137	Slc1a1 (ENSNGAG00000014723) #19	Plpp6 (ENSNGAG00000014756) #21	Spata6l (ENSNGAG00000017948) #20	Cdc37l1 (ENSNGAG00000018155) #22	Ak3 (ENSNGAG00000016647) #23	Rcl1 (ENSNGAG00000015327) #24	Jak2 (ENSNGAG00000000096) #25
Lesser Egyptian jerboa	MODERN SPECIES	50	Dmrt2 (ENSJJAG00000023959) #8	ENSJJAG00000010719	Smarca2 (ENSJJAG00000010867) #9	Vldlr (ENSJJAG00000016440) #12	ENSJJAG00000000409 #11	Kcnv2 (ENSJJAG00000016782) #13	Pum3 (ENSJJAG00000012563) #14	ENSJJAG00000010263	Rfx3 (ENSJJAG00000010280) #16	ENSJJAG00000024335	Glis3 (ENSJJAG00000011399) #18	Slc1a1 (ENSJJAG00000018507) #19	ENSJJAG00000020462	Spata6l (ENSJJAG00000022941) #20	Plpp6 (ENSJJAG00000011277) #21	Cdc37l1 (ENSJJAG00000024330) #22	Ak3 (ENSJJAG00000023388) #23	ENSJJAG00000022803 #24	Jak2 (ENSJJAG00000012271) #25	Rln1 (ENSJJAG00000013838) #30	Plgrkt (ENSJJAG00000010846) #31	Ric1 (ENSJJAG00000014841) #35	Ermp1 (ENSJJAG00000021848) #36	Mlana (ENSJJAG00000022272) #37	9930021J03Rik (ENSJJAG00000016877)	Ranbp6 (ENSJJAG00000010492)	ENSJJAG00000006290	Uhrf2 (ENSJJAG00000023371)	Gldc (ENSJJAG00000023082)	Dkk1 (ENSJJAG00000002379)	Prkg1 (ENSJJAG00000015715)
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Eulipotyphla	ANCESTRAL SPECIES	775															ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23
Hedgehog	MODERN SPECIES	1028																CDC37L1 (ENSEEUG00000010138) #22
Common shrew	MODERN SPECIES	598															SPATA6L (ENSSARG00000004566) #20	CDC37L1 (ENSSARG00000004588) #22	AK3 (ENSSARG00000004598) #23
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Suina	ANCESTRAL SPECIES	23	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00520000061590 #11	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Chacoan peccary	MODERN SPECIES	20	DMRT1 (ENSCWAG00000020382)	DMRT3 (ENSCWAG00000020400) #7	DMRT2 (ENSCWAG00000020422) #8	ENSCWAG00000020471	SMARCA2 (ENSCWAG00000020512) #9	VLDLR (ENSCWAG00000020653) #12	ENSCWAG00000020684 #11	KCNV2 (ENSCWAG00000020693) #13	PUM3 (ENSCWAG00000020700) #14	RFX3 (ENSCWAG00000020726) #16	ENSCWAG00000020759	GLIS3 (ENSCWAG00000020767) #18	SLC1A1 (ENSCWAG00000020776) #19	SPATA6L (ENSCWAG00000020801) #20	PLPP6 (ENSCWAG00000020823) #21	CDC37L1 (ENSCWAG00000020832) #22	AK3 (ENSCWAG00000020856) #23	RCL1 (ENSCWAG00000020883) #24	ENSCWAG00000020913	ENSCWAG00000020920	JAK2 (ENSCWAG00000020930) #25	INSL6 (ENSCWAG00000020954) #27	ENSCWAG00000020963 #30	PLGRKT (ENSCWAG00000021002) #31	CD274 (ENSCWAG00000021014) #33	PDCD1LG2 (ENSCWAG00000021026) #34	ENSCWAG00000021040	RIC1 (ENSCWAG00000021078) #35	ERMP1 (ENSCWAG00000021102) #36	MLANA (ENSCWAG00000021120) #37	KIAA2026 (ENSCWAG00000021140)
Pig	MODERN SPECIES		ENSSSCG00000032324	ENSSSCG00000057314 #9	ENSSSCG00000005232 #9	ENSSSCG00000041522	ENSSSCG00000052990	ENSSSCG00000040670 #11	VLDLR (ENSSSCG00000005229) #12	KCNV2 (ENSSSCG00000005228) #13	PUM3 (ENSSSCG00000005227) #14	ENSSSCG00000039823	RFX3 (ENSSSCG00000005225) #16	GLIS3 (ENSSSCG00000005224) #18	SLC1A1 (ENSSSCG00000005222) #19	PLPP6 (ENSSSCG00000005220) #21	SPATA6L (ENSSSCG00000005221) #20	CDC37L1 (ENSSSCG00000005219) #22	AK3 (ENSSSCG00000023595) #23	ENSSSCG00000058562 #24	ENSSSCG00000005217 #24	ENSSSCG00000052472	JAK2 (ENSSSCG00000005215) #25	INSL6 (ENSSSCG00000005214) #27	ENSSSCG00000005216 #30	PLGRKT (ENSSSCG00000005212) #31	CD274 (ENSSSCG00000005211) #33	PDCD1LG2 (ENSSSCG00000032561) #34	ENSSSCG00000005209	RIC1 (ENSSSCG00000005208) #35	ERMP1 (ENSSSCG00000005207) #36	MLANA (ENSSSCG00000005206) #37	KIAA2026 (ENSSSCG00000005205)
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Camelidae	ANCESTRAL SPECIES	5	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a.f #30	ENSGT00940000154434.a.e #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000167431	ENSGT00390000005185
Arabian camel	MODERN SPECIES	30	DOCK8 (ENSCDRG00005003115)	KANK1 (ENSCDRG00005003188)	DMRT1 (ENSCDRG00005003226)	DMRT3 (ENSCDRG00005003237) #7	DMRT2 (ENSCDRG00005003248) #8	ENSCDRG00005003352 #9	VLDLR (ENSCDRG00005003699) #12	KCNV2 (ENSCDRG00005003822) #13	PUM3 (ENSCDRG00005003846) #14	ENSCDRG00005003916	RFX3 (ENSCDRG00005004007) #16	GLIS3 (ENSCDRG00005004109) #18	SLC1A1 (ENSCDRG00005004192) #19	SPATA6L (ENSCDRG00005004284) #20	PLPP6 (ENSCDRG00005004350) #21	CDC37L1 (ENSCDRG00005004358) #22	AK3 (ENSCDRG00005004398) #23	RCL1 (ENSCDRG00005004458) #24	JAK2 (ENSCDRG00005004520) #25	INSL6 (ENSCDRG00005004548) #27	ENSCDRG00005004570 #30	PLGRKT (ENSCDRG00005004613) #31	ENSCDRG00005004708 #30	CD274 (ENSCDRG00005004734) #33	PDCD1LG2 (ENSCDRG00005004849) #34	RIC1 (ENSCDRG00005004883) #35	ERMP1 (ENSCDRG00005005148) #36	MLANA (ENSCDRG00005005180) #37	KIAA2026 (ENSCDRG00005005203)	ENSCDRG00005005267	IL33 (ENSCDRG00005005282)
Alpaca	MODERN SPECIES	3435														SLC1A1 (ENSVPAG00000009183) #19	SPATA6L (ENSVPAG00000009184) #20	CDC37L1 (ENSVPAG00000009186) #22	AK3 (ENSVPAG00000009187) #23	RCL1 (ENSVPAG00000009188) #24	JAK2 (ENSVPAG00000009189) #25	INSL6 (ENSVPAG00000009194) #27
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Pecora	ANCESTRAL SPECIES	30	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00660000097148	ENSGT00940000155397.b #19	ENSGT00940000160907 #21	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000167431	ENSGT00390000005185	ENSGT00940000163110	ENSGT00390000008296.b.a.a
Yarkand deer	MODERN SPECIES	21	KANK1 (ENSCHYG00000014368)	ENSCHYG00000014288	DMRT1 (ENSCHYG00000014189)	DMRT3 (ENSCHYG00000026880) #7	DMRT2 (ENSCHYG00000026873) #8	SMARCA2 (ENSCHYG00000026820) #9	ENSCHYG00000026782 #11	VLDLR (ENSCHYG00000026763) #12	KCNV2 (ENSCHYG00000026745) #13	PUM3 (ENSCHYG00000026723) #14	RFX3 (ENSCHYG00000026695) #16	GLIS3 (ENSCHYG00000026667) #18	SLC1A1 (ENSCHYG00000026638) #19	PLPP6 (ENSCHYG00000026621) #21	SPATA6L (ENSCHYG00000026599) #20	CDC37L1 (ENSCHYG00000026576) #22	AK3 (ENSCHYG00000026564) #23	RCL1 (ENSCHYG00000026548) #24	JAK2 (ENSCHYG00000026521) #25	INSL6 (ENSCHYG00000026514) #27	PLGRKT (ENSCHYG00000026504) #31	CD274 (ENSCHYG00000026492) #33	PDCD1LG2 (ENSCHYG00000026474) #34	RIC1 (ENSCHYG00000026365) #35	ERMP1 (ENSCHYG00000026281) #36	MLANA (ENSCHYG00000026247) #37	KIAA2026 (ENSCHYG00000026213)	ENSCHYG00000026199	IL33 (ENSCHYG00000026175)	ENSCHYG00000026163	UHRF2 (ENSCHYG00000026053)
Percora_a	ANCESTRAL SPECIES	24	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00660000097148	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000167431	ENSGT00390000005185	ENSGT00940000163110	ENSGT00390000008296.b.a.a
Bovidae	ANCESTRAL SPECIES	14	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00660000097148	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000167431	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Caprinae	ANCESTRAL SPECIES	14	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00660000097148	ENSGT00940000155397.b #19	ENSGT00940000160907 #21	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110	ENSGT00390000008296.b.a.a
Rambouillet Sheep	MODERN SPECIES	11	KANK1 (ENSOARG00020024004)	DMRT1 (ENSOARG00020024107)	DMRT3 (ENSOARG00020024138) #7	DMRT2 (ENSOARG00020024148) #8	SMARCA2 (ENSOARG00020024243) #9	VLDLR (ENSOARG00020024482) #12	ENSOARG00020024556 #11	KCNV2 (ENSOARG00020006537) #13	PUM3 (ENSOARG00020006587) #14	ENSOARG00020006681	RFX3 (ENSOARG00020006756) #16	GLIS3 (ENSOARG00020007233) #18	SLC1A1 (ENSOARG00020007364) #19	PLPP6 (ENSOARG00020007422) #21	ENSOARG00020007455	CDC37L1 (ENSOARG00020007479) #22	AK3 (ENSOARG00020007523) #23	RCL1 (ENSOARG00020007598) #24	JAK2 (ENSOARG00020007686) #25	ENSOARG00020007887 #27	PLGRKT (ENSOARG00020007941) #31	CD274 (ENSOARG00020007985) #33	ENSOARG00020008038	ENSOARG00020008062	RIC1 (ENSOARG00020008132) #35	ERMP1 (ENSOARG00020008927) #36	ENSOARG00020009072	MLANA (ENSOARG00020009106) #37	KIAA2026 (ENSOARG00020009163)	ENSOARG00020009214	IL33 (ENSOARG00020009248)
Goat	MODERN SPECIES	27	DMRT1 (ENSCHIG00000024212)	DMRT3 (ENSCHIG00000013041) #7	DMRT2 (ENSCHIG00000020138) #8	SMARCA2 (ENSCHIG00000025863) #9	ENSCHIG00000012185 #11	VLDLR (ENSCHIG00000021572) #12	KCNV2 (ENSCHIG00000011625) #13	PUM3 (ENSCHIG00000021559) #14	RFX3 (ENSCHIG00000011556) #16	ENSCHIG00000019534 #18	ENSCHIG00000007959	SLC1A1 (ENSCHIG00000018337) #19	PLPP6 (ENSCHIG00000001745) #21	SPATA6L (ENSCHIG00000020946) #20	ENSCHIG00000010369	CDC37L1 (ENSCHIG00000025238) #22	AK3 (ENSCHIG00000024602) #23	RCL1 (ENSCHIG00000012407) #24	INSL6 (ENSCHIG00000020505) #27	JAK2 (ENSCHIG00000003903) #25	PLGRKT (ENSCHIG00000017669) #31	CD274 (ENSCHIG00000017335) #33	PDCD1LG2 (ENSCHIG00000024438) #34	RIC1 (ENSCHIG00000021856) #35	ERMP1 (ENSCHIG00000026817) #36	MLANA (ENSCHIG00000014493) #37	KIAA2026 (ENSCHIG00000024183)	RANBP6 (ENSCHIG00000006704)	IL33 (ENSCHIG00000020304)	ENSCHIG00000026418	UHRF2 (ENSCHIG00000015113)
Bovinae	ANCESTRAL SPECIES	14	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000167431	ENSGT00390000005185	ENSGT00940000163110	ENSGT00390000010415.b
Bos	ANCESTRAL SPECIES	10	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000167431	ENSGT00390000005185	ENSGT00940000163110	ENSGT00390000010415.b
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00940000160907 #21	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000167431	ENSGT00390000005185	ENSGT00940000163110	ENSGT00390000010415.b
Hybrid Bos Indicus	MODERN SPECIES	27	DMRT3 (ENSBIXG00005018199) #7	DMRT2 (ENSBIXG00005018266) #8	SMARCA2 (ENSBIXG00005018551) #9	ENSBIXG00005005990 #11	VLDLR (ENSBIXG00005003037) #12	KCNV2 (ENSBIXG00005018778) #13	PUM3 (ENSBIXG00005018805) #14	ENSBIXG00005018899	RFX3 (ENSBIXG00005003091) #16	GLIS3 (ENSBIXG00005002642) #18	ENSBIXG00005019106	SLC1A1 (ENSBIXG00005019133) #19	PLPP6 (ENSBIXG00005019138) #21	ENSBIXG00005019159	SPATA6L (ENSBIXG00005019220) #20	CDC37L1 (ENSBIXG00005019277) #22	AK3 (ENSBIXG00005019326) #23	RCL1 (ENSBIXG00005019414) #24	JAK2 (ENSBIXG00005003171) #25	INSL6 (ENSBIXG00005003183) #27	PLGRKT (ENSBIXG00005006397) #31	CD274 (ENSBIXG00005003188) #33	PDCD1LG2 (ENSBIXG00005019595) #34	ENSBIXG00005019603	RIC1 (ENSBIXG00005019710) #35	ERMP1 (ENSBIXG00005000033) #36	ENSBIXG00005019813	ENSBIXG00005003243	MLANA (ENSBIXG00005006149) #37	ENSBIXG00005019895	KIAA2026 (ENSBIXG00005002637)
Bos_a	ANCESTRAL SPECIES	30	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00910000144347.a.a	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000167431	ENSGT00390000005185	ENSGT00940000163110	ENSGT00390000010415.b
Domestic yak	MODERN SPECIES	26	DMRT3 (ENSBGRG00000003946) #7	DMRT2 (ENSBGRG00000003984) #8	SMARCA2 (ENSBGRG00000004107) #9	VLDLR (ENSBGRG00000004545) #12	KCNV2 (ENSBGRG00000004767) #13	PUM3 (ENSBGRG00000004833) #14	ENSBGRG00000004951	RFX3 (ENSBGRG00000004985) #16	ENSBGRG00000005081	ENSBGRG00000005096	GLIS3 (ENSBGRG00000005123) #18	SLC1A1 (ENSBGRG00000005214) #19	SPATA6L (ENSBGRG00000005420) #20	PLPP6 (ENSBGRG00000005557) #21	ENSBGRG00000005568	CDC37L1 (ENSBGRG00000005637) #22	AK3 (ENSBGRG00000005727) #23	RCL1 (ENSBGRG00000005812) #24	ENSBGRG00000005967	JAK2 (ENSBGRG00000005982) #25	INSL6 (ENSBGRG00000006012) #27	PLGRKT (ENSBGRG00000006032) #31	CD274 (ENSBGRG00000006097) #33	PDCD1LG2 (ENSBGRG00000006267) #34	RIC1 (ENSBGRG00000006377) #35	ENSBGRG00000006488	ERMP1 (ENSBGRG00000006502) #36	MLANA (ENSBGRG00000006530) #37	KIAA2026 (ENSBGRG00000006569)	ENSBGRG00000006611	ENSBGRG00000006647
Wild yak	MODERN SPECIES	400												SLC1A1 (ENSBMUG00000005311) #19	PLPP6 (ENSBMUG00000005280) #21	ENSBMUG00000005270	SPATA6L (ENSBMUG00000005249) #20	CDC37L1 (ENSBMUG00000005208) #22	AK3 (ENSBMUG00000005196) #23	RCL1 (ENSBMUG00000005171) #24	JAK2 (ENSBMUG00000005141) #25	INSL6 (ENSBMUG00000005110) #27	PLGRKT (ENSBMUG00000005103) #31	CD274 (ENSBMUG00000005088) #33	PDCD1LG2 (ENSBMUG00000005066) #34	RIC1 (ENSBMUG00000005025) #35	ERMP1 (ENSBMUG00000004882) #36	MLANA (ENSBMUG00000004855) #37	KIAA2026 (ENSBMUG00000004847)	ENSBMUG00000004833
American bison	MODERN SPECIES	3328	DMRT1 (ENSBBBG00000016649)	DMRT3 (ENSBBBG00000016636) #7	DMRT2 (ENSBBBG00000016627) #8	SMARCA2 (ENSBBBG00000004105) #9	ENSBBBG00000016209	VLDLR (ENSBBBG00000008333) #12	ENSBBBG00000007174 #11	KCNV2 (ENSBBBG00000016123) #13	PUM3 (ENSBBBG00000007035) #14	RFX3 (ENSBBBG00000003993) #16	GLIS3 (ENSBBBG00000016019) #18	SLC1A1 (ENSBBBG00000015989) #19	SPATA6L (ENSBBBG00000015978) #20	PLPP6 (ENSBBBG00000015953) #21	ENSBBBG00000003969	CDC37L1 (ENSBBBG00000002586) #22	AK3 (ENSBBBG00000003960) #23	RCL1 (ENSBBBG00000015884) #24	JAK2 (ENSBBBG00000015845) #25	INSL6 (ENSBBBG00000015826) #27	PLGRKT (ENSBBBG00000015820) #31	CD274 (ENSBBBG00000015809) #33
Siberian musk deer	MODERN SPECIES	111						ENSMMSG00000002256 #11	VLDLR (ENSMMSG00000002160) #12	KCNV2 (ENSMMSG00000002132) #13	PUM3 (ENSMMSG00000002099) #14	ENSMMSG00000002091	RFX3 (ENSMMSG00000002070) #16	GLIS3 (ENSMMSG00000002042) #18	SLC1A1 (ENSMMSG00000002015) #19	PLPP6 (ENSMMSG00000002003) #21	SPATA6L (ENSMMSG00000001959) #20	CDC37L1 (ENSMMSG00000001936) #22	AK3 (ENSMMSG00000001923) #23	RCL1 (ENSMMSG00000001886) #24	ENSMMSG00000001874	JAK2 (ENSMMSG00000001846) #25	INSL6 (ENSMMSG00000001838) #27	PLGRKT (ENSMMSG00000001829) #31
Cetacea	ANCESTRAL SPECIES	9	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Blue whale	MODERN SPECIES	17	DOCK8 (ENSBMSG00010000177)	ENSBMSG00010000100	KANK1 (ENSBMSG00010000089)	DMRT1 (ENSBMSG00010004442)	DMRT3 (ENSBMSG00010004420) #7	DMRT2 (ENSBMSG00010004396) #8	SMARCA2 (ENSBMSG00010004262) #9	VLDLR (ENSBMSG00010004233) #12	KCNV2 (ENSBMSG00010004219) #13	PUM3 (ENSBMSG00010004204) #14	RFX3 (ENSBMSG00010004165) #16	GLIS3 (ENSBMSG00010004124) #18	SLC1A1 (ENSBMSG00010004095) #19	PLPP6 (ENSBMSG00010004080) #21	SPATA6L (ENSBMSG00010004050) #20	CDC37L1 (ENSBMSG00010004036) #22	AK3 (ENSBMSG00010004013) #23	RCL1 (ENSBMSG00010003993) #24	JAK2 (ENSBMSG00010003969) #25	INSL6 (ENSBMSG00010003955) #27	ENSBMSG00010003948 #30	PLGRKT (ENSBMSG00010003942) #31	CD274 (ENSBMSG00010003928) #33	PDCD1LG2 (ENSBMSG00010003898) #34	RIC1 (ENSBMSG00010003869) #35	ERMP1 (ENSBMSG00010003832) #36	MLANA (ENSBMSG00010003817) #37	KIAA2026 (ENSBMSG00010003802)	ENSBMSG00010003784	ENSBMSG00010003773	IL33 (ENSBMSG00010003753)
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000165777.a.a	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Sperm whale	MODERN SPECIES	20	DMRT1 (ENSPCTG00005004498)	DMRT3 (ENSPCTG00005004535) #7	DMRT2 (ENSPCTG00005004572) #8	ENSPCTG00005004671	ENSPCTG00005004691	ENSPCTG00005004736 #9	VLDLR (ENSPCTG00005004995) #12	KCNV2 (ENSPCTG00005005193) #13	PUM3 (ENSPCTG00005005228) #14	ENSPCTG00005005299	RFX3 (ENSPCTG00005005359) #16	GLIS3 (ENSPCTG00005005407) #18	SLC1A1 (ENSPCTG00005005440) #19	SPATA6L (ENSPCTG00005005489) #20	PLPP6 (ENSPCTG00005005512) #21	CDC37L1 (ENSPCTG00005005531) #22	AK3 (ENSPCTG00005005584) #23	RCL1 (ENSPCTG00005005644) #24	JAK2 (ENSPCTG00005005720) #25	INSL6 (ENSPCTG00005005856) #27	ENSPCTG00005005885 #30	PLGRKT (ENSPCTG00005005902) #31	CD274 (ENSPCTG00005005931) #33	PDCD1LG2 (ENSPCTG00005005956) #34	RIC1 (ENSPCTG00005006024) #35	ERMP1 (ENSPCTG00005006142) #36	MLANA (ENSPCTG00005006205) #37	KIAA2026 (ENSPCTG00005006243)	RANBP6 (ENSPCTG00005006329)	IL33 (ENSPCTG00005006356)	TPD52L3 (ENSPCTG00005006421)
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000165777.a.a	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Dolphin	MODERN SPECIES	3311														SPATA6L (ENSTTRG00000016521) #20	PLPP6 (ENSTTRG00000016522) #21	CDC37L1 (ENSTTRG00000016523) #22	AK3 (ENSTTRG00000016524) #23	RCL1 (ENSTTRG00000016525) #24
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000165777.a.a	ENSGT01050000244891.A.c.a.a	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Vaquita	MODERN SPECIES	17	KANK1 (ENSPSNG00000018178)	DMRT1 (ENSPSNG00000018301)	DMRT3 (ENSPSNG00000018387) #7	DMRT2 (ENSPSNG00000018429) #8	ENSPSNG00000018606	ENSPSNG00000018632	SMARCA2 (ENSPSNG00000018802) #9	VLDLR (ENSPSNG00000019297) #12	KCNV2 (ENSPSNG00000019443) #13	PUM3 (ENSPSNG00000019496) #14	RFX3 (ENSPSNG00000019643) #16	GLIS3 (ENSPSNG00000019903) #18	SLC1A1 (ENSPSNG00000019992) #19	SPATA6L (ENSPSNG00000020084) #20	PLPP6 (ENSPSNG00000020203) #21	CDC37L1 (ENSPSNG00000020228) #22	AK3 (ENSPSNG00000020263) #23	RCL1 (ENSPSNG00000020330) #24	JAK2 (ENSPSNG00000020398) #25	ENSPSNG00000020509 #30	PLGRKT (ENSPSNG00000020541) #31	ENSPSNG00000020589 #34	RIC1 (ENSPSNG00000020684) #35	ERMP1 (ENSPSNG00000020793) #36	MLANA (ENSPSNG00000020843) #37	KIAA2026 (ENSPSNG00000020897)	RANBP6 (ENSPSNG00000020980)	IL33 (ENSPSNG00000021022)	TPD52L3 (ENSPSNG00000021045)	UHRF2 (ENSPSNG00000021087)	GLDC (ENSPSNG00000021229)
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000165777.a.a	ENSGT01050000244891.A.c.a.a	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Narwhal	MODERN SPECIES	312	DMRT1 (ENSMMNG00015013112)	DMRT3 (ENSMMNG00015013099) #7	DMRT2 (ENSMMNG00015013077) #8	ENSMMNG00015021427	ENSMMNG00015021422	SMARCA2 (ENSMMNG00015021345) #9	VLDLR (ENSMMNG00015021252) #12	KCNV2 (ENSMMNG00015021226) #13	PUM3 (ENSMMNG00015021202) #14	ENSMMNG00015021179	RFX3 (ENSMMNG00015021042) #16	GLIS3 (ENSMMNG00015021011) #18	SLC1A1 (ENSMMNG00015020990) #19	PLPP6 (ENSMMNG00015020983) #21	SPATA6L (ENSMMNG00015020944) #20	CDC37L1 (ENSMMNG00015020918) #22	AK3 (ENSMMNG00015020890) #23	RCL1 (ENSMMNG00015020841) #24	JAK2 (ENSMMNG00015020808) #25	ENSMMNG00015020785 #27	ENSMMNG00015020775 #30	PLGRKT (ENSMMNG00015020757) #31	CD274 (ENSMMNG00015020739) #33	PDCD1LG2 (ENSMMNG00015020694) #34	RIC1 (ENSMMNG00015020565) #35	ERMP1 (ENSMMNG00015020481) #36	MLANA (ENSMMNG00015020456) #37	KIAA2026 (ENSMMNG00015020402)	ENSMMNG00015020366	IL33 (ENSMMNG00015020337)	TPD52L3 (ENSMMNG00015020325)
Beluga whale	MODERN SPECIES	50	ENSDLEG00000019284 ##8	DMRT2 (ENSDLEG00000019289) #8	ENSDLEG00000019303	ENSDLEG00000019309	SMARCA2 (ENSDLEG00000019318) #9	VLDLR (ENSDLEG00000019340) #12	KCNV2 (ENSDLEG00000019382) #13	PUM3 (ENSDLEG00000019389) #14	RFX3 (ENSDLEG00000019460) #16	ENSDLEG00000019514 #18	ENSDLEG00000019522	SLC1A1 (ENSDLEG00000019531) #19	ENSDLEG00000019547 #20	ENSDLEG00000019609 #20	PLPP6 (ENSDLEG00000019637) #21	CDC37L1 (ENSDLEG00000019644) #22	AK3 (ENSDLEG00000019654) #23	RCL1 (ENSDLEG00000019668) #24	JAK2 (ENSDLEG00000019680) #25	ENSDLEG00000019692 #27	RLN1 (ENSDLEG00000019703) #30	PLGRKT (ENSDLEG00000019711) #31	CD274 (ENSDLEG00000019715) #33	PDCD1LG2 (ENSDLEG00000019719) #34	RIC1 (ENSDLEG00000019725) #35	ERMP1 (ENSDLEG00000019731) #36	MLANA (ENSDLEG00000019742) #37	KIAA2026 (ENSDLEG00000019748)	RANBP6 (ENSDLEG00000019757)	IL33 (ENSDLEG00000019759)	TPD52L3 (ENSDLEG00000019764)
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Carnivora	ANCESTRAL SPECIES	25	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00950000183043.a.b.b.a.a.a.b	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000160540	ENSGT00940000157484
Caniformia	ANCESTRAL SPECIES	29	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00950000183043.a.b.b.a.a.b.h	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.a.b	ENSGT00550000074872	ENSGT00940000153947.A
Canidae	ANCESTRAL SPECIES	47	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120.lb.b #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00950000183043.a.b.b.a.a.b.h	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.a.b	ENSGT00550000074872	ENSGT00940000153947.A
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00950000182772.A.a.b.n.b	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120.lb.b #23	ENSGT00530000063404.a #24	ENSGT01050000248397	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00950000183043.a.b.b.a.a.b.h	ENSGT00940000154257.j.nb.a	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.a.b
Dingo	MODERN SPECIES	125	DMRT3 (ENSCAFG00020026752) #7	DMRT2 (ENSCAFG00020026753) #8	ENSCAFG00020026759	ENSCAFG00020026766 #9	ENSCAFG00020026802 #9	ENSCAFG00020026863 #11	VLDLR (ENSCAFG00020026865) #12	KCNV2 (ENSCAFG00020026866) #13	PUM3 (ENSCAFG00020026867) #14	RFX3 (ENSCAFG00020026868) #16	ENSCAFG00020026870	GLIS3 (ENSCAFG00020000104) #18	SLC1A1 (ENSCAFG00020000361) #19	SPATA6L (ENSCAFG00020000384) #20	PLPP6 (ENSCAFG00020000503) #21	CDC37L1 (ENSCAFG00020000516) #22	ENSCAFG00020000594 #23	ENSCAFG00020000622	RCL1 (ENSCAFG00020000638) #24	ENSCAFG00020000655	ENSCAFG00020000670	JAK2 (ENSCAFG00020001020) #25	INSL6 (ENSCAFG00020005010) #27	ENSCAFG00020005012 #30	PLGRKT (ENSCAFG00020005050) #31	CD274 (ENSCAFG00020005055) #33	PDCD1LG2 (ENSCAFG00020005060) #34	RIC1 (ENSCAFG00020005108) #35	ERMP1 (ENSCAFG00020005183) #36	ENSCAFG00020005250	ENSCAFG00020005296
Dog	MODERN SPECIES		DMRT1 (ENSCAFG00845001983)	DMRT3 (ENSCAFG00845002003) #7	DMRT2 (ENSCAFG00845002026) #8	ENSCAFG00845002045	SMARCA2 (ENSCAFG00845002161) #9	VLDLR (ENSCAFG00845002345) #12	KCNV2 (ENSCAFG00845002424) #13	PUM3 (ENSCAFG00845002440) #14	ENSCAFG00845002474	RFX3 (ENSCAFG00845002562) #16	ENSCAFG00845002739	GLIS3 (ENSCAFG00845002759) #18	SLC1A1 (ENSCAFG00845002818) #19	SPATA6L (ENSCAFG00845002856) #20	PLPP6 (ENSCAFG00845002916) #21	CDC37L1 (ENSCAFG00845015553) #22	ENSCAFG00845015626 #23	ENSCAFG00845015667	JAK2 (ENSCAFG00845015728) #24	ENSCAFG00845015836	JAK2 (ENSCAFG00845015887) #25	ENSCAFG00845016006	INSL6 (ENSCAFG00845016024) #27	RLN2 (ENSCAFG00845016044) #30	PLGRKT (ENSCAFG00845016070) #31	CD274 (ENSCAFG00845016107) #33	PDCD1LG2 (ENSCAFG00845016232) #34	RIC1 (ENSCAFG00845016384) #35	ENSCAFG00845016712 #36	ENSCAFG00845016939	ENSCAFG00845016963
Red fox	MODERN SPECIES	37	DMRT1 (ENSVVUG00000004545)	DMRT3 (ENSVVUG00000004555) #7	DMRT2 (ENSVVUG00000004562) #8	ENSVVUG00000004580 #9	ENSVVUG00000004598 #9	VLDLR (ENSVVUG00000004925) #12	ENSVVUG00000006514 #11	KCNV2 (ENSVVUG00000006518) #13	PUM3 (ENSVVUG00000006527) #14	ENSVVUG00000006545	RFX3 (ENSVVUG00000006609) #16	GLIS3 (ENSVVUG00000007122) #18	SLC1A1 (ENSVVUG00000007200) #19	SPATA6L (ENSVVUG00000007223) #20	ENSVVUG00000007267 #21	CDC37L1 (ENSVVUG00000007275) #22	AK3 (ENSVVUG00000007282) #23	RCL1 (ENSVVUG00000007304) #24	JAK2 (ENSVVUG00000007315) #25	INSL6 (ENSVVUG00000007335) #27	CD274 (ENSVVUG00000007347) #33	ENSVVUG00000007360 #30	PLGRKT (ENSVVUG00000007362) #31	PDCD1LG2 (ENSVVUG00000007366) #34	RIC1 (ENSVVUG00000007409) #35	ERMP1 (ENSVVUG00000007447) #36	ENSVVUG00000007464	ENSVVUG00000007496	ENSVVUG00000008064
Caniformia_b	ANCESTRAL SPECIES	32	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00950000183043.a.b.b.a.a.b.h	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.a.b	ENSGT00550000074872	ENSGT00940000153947.A
Ursidae	ANCESTRAL SPECIES	43	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00950000183043.a.b.b.a.a.b.h	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.b	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000160540
Ursus	ANCESTRAL SPECIES	50	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT00940000166172	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120.hb.a #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839.g #36	ENSGT00530000063839.h #36	ENSGT00950000183043.a.b.b.a.a.b.h	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.a.b	ENSGT00550000074872
American black bear	MODERN SPECIES	4544													SLC1A1 (ENSUAMG00000009116) #19	SPATA6L (ENSUAMG00000009016) #20	PLPP6 (ENSUAMG00000009008) #21	CDC37L1 (ENSUAMG00000009007) #22	ENSUAMG00000008999 #23
Polar bear	MODERN SPECIES	171	KANK1 (ENSUMAG00000019362)	ENSUMAG00000019350	DMRT2 (ENSUMAG00000019339) #8	ENSUMAG00000019328 #9	ENSUMAG00000019303 #9	VLDLR (ENSUMAG00000018747) #12	KCNV2 (ENSUMAG00000018690) #13	PUM3 (ENSUMAG00000018443) #14	ENSUMAG00000018187	ENSUMAG00000018118	RFX3 (ENSUMAG00000018101) #16	GLIS3 (ENSUMAG00000018031) #18	SLC1A1 (ENSUMAG00000017970) #19	ENSUMAG00000017954 #21	SPATA6L (ENSUMAG00000017942) #20	CDC37L1 (ENSUMAG00000017926) #22	ENSUMAG00000017904 #23	RCL1 (ENSUMAG00000017890) #24	JAK2 (ENSUMAG00000016820) #25	INSL6 (ENSUMAG00000016724) #27	ENSUMAG00000016719 #31	CD274 (ENSUMAG00000016708) #33	PDCD1LG2 (ENSUMAG00000016707) #34	RIC1 (ENSUMAG00000016695) #35	ENSUMAG00000016690 #36	ENSUMAG00000016687 #36	ENSUMAG00000016678	ENSUMAG00000016675	ENSUMAG00000016672	ENSUMAG00000016671	ENSUMAG00000016656
Giant Panda	MODERN SPECIES	8	DOCK8 (ENSAMEG00000006698)	KANK1 (ENSAMEG00000006667)	DMRT3 (ENSAMEG00000006664) #7	DMRT2 (ENSAMEG00000006648) #8	ENSAMEG00000019747	SMARCA2 (ENSAMEG00000012325) #9	ENSAMEG00000027822 #11	VLDLR (ENSAMEG00000012233) #12	KCNV2 (ENSAMEG00000012228) #13	PUM3 (ENSAMEG00000012187) #14	ENSAMEG00000012183	RFX3 (ENSAMEG00000012132) #16	GLIS3 (ENSAMEG00000002733) #18	SLC1A1 (ENSAMEG00000002682) #19	ENSAMEG00000002674 #20	CDC37L1 (ENSAMEG00000002657) #22	AK3 (ENSAMEG00000002640) #23	RCL1 (ENSAMEG00000002631) #24	JAK2 (ENSAMEG00000009661) #25	INSL6 (ENSAMEG00000009778) #27	ENSAMEG00000009780 #30	CD274 (ENSAMEG00000009800) #33	PLGRKT (ENSAMEG00000009795) #31	PDCD1LG2 (ENSAMEG00000009830) #34	RIC1 (ENSAMEG00000009846) #35	ENSAMEG00000009883 #36	ENSAMEG00000009909	ENSAMEG00000031178	ENSAMEG00000017286	ENSAMEG00000026961	ENSAMEG00000017351
Mustelinae	ANCESTRAL SPECIES	87	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00940000160907 #21	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36
Ferret	MODERN SPECIES	281	DOCK8 (ENSMPUG00000005223)	KANK1 (ENSMPUG00000005216)	DMRT1 (ENSMPUG00000005204)	DMRT2 (ENSMPUG00000005199) #8	ENSMPUG00000005192	SMARCA2 (ENSMPUG00000005171) #9	ENSMPUG00000005169	VLDLR (ENSMPUG00000005155) #12	KCNV2 (ENSMPUG00000005137) #13	PUM3 (ENSMPUG00000005125) #14	ENSMPUG00000005120	RFX3 (ENSMPUG00000005101) #16	GLIS3 (ENSMPUG00000005095) #18	SLC1A1 (ENSMPUG00000005081) #19	SPATA6L (ENSMPUG00000005024) #20	CDC37L1 (ENSMPUG00000005018) #22	AK3 (ENSMPUG00000005006) #23	RCL1 (ENSMPUG00000004998) #24	JAK2 (ENSMPUG00000004974) #25	INSL6 (ENSMPUG00000004968) #27	ENSMPUG00000004961 #30	CD274 (ENSMPUG00000004954) #33	PDCD1LG2 (ENSMPUG00000004909) #34	ENSMPUG00000004903 #35	ENSMPUG00000004889 #35	ERMP1 (ENSMPUG00000004878) #36	ENSMPUG00000004873	MFSD14B (ENSMPUG00000004866)	ENSMPUG00000019578	ZNF484 (ENSMPUG00000004860)	IARS1 (ENSMPUG00000004835)
American mink	MODERN SPECIES	365												GLIS3 (ENSNVIG00000021365) #18	SLC1A1 (ENSNVIG00000021350) #19	PLPP6 (ENSNVIG00000021343) #21	SPATA6L (ENSNVIG00000021312) #20	CD37L (ENSNVIG00000021293) #22	AK3 (ENSNVIG00000021277) #23	RCL1 (ENSNVIG00000021229) #24	JAK2 (ENSNVIG00000021199) #25	INSL6 (ENSNVIG00000021192) #27	ENSNVIG00000021190 #30	PLGRKT (ENSNVIG00000021188) #31
Felidae	ANCESTRAL SPECIES	28	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155028.q.b.e.b	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00950000183043.a.b.b.a.a.b.g.b	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.a.a.a.a	ENSGT00550000074872	ENSGT00940000153947.A
Cat	MODERN SPECIES	244	KANK1 (ENSFCAG00000006458)	DMRT1 (ENSFCAG00000006459)	DMRT3 (ENSFCAG00000036847) #7	DMRT2 (ENSFCAG00000006461) #8	SMARCA2 (ENSFCAG00000001568) #9	ENSFCAG00000041218 #11	VLDLR (ENSFCAG00000013257) #12	KCNV2 (ENSFCAG00000004335) #13	ENSFCAG00000013260	RFX3 (ENSFCAG00000012950) #16	GLIS3 (ENSFCAG00000046401) #18	ENSFCAG00000037557	SLC1A1 (ENSFCAG00000023590) #19	PLPP6 (ENSFCAG00000038113) #21	SPATA6L (ENSFCAG00000002369) #20	CDC37L1 (ENSFCAG00000027076) #22	AK3 (ENSFCAG00000028063) #23	RCL1 (ENSFCAG00000014557) #24	JAK2 (ENSFCAG00000028588) #25	INSL6 (ENSFCAG00000044599) #27	RLN (ENSFCAG00000011471) #30	PLGRKT (ENSFCAG00000039638) #31	CD274 (ENSFCAG00000009047) #33	PDCD1LG2 (ENSFCAG00000009048) #34	RIC1 (ENSFCAG00000014910) #35	ERMP1 (ENSFCAG00000014912) #36	ENSFCAG00000047453	ENSFCAG00000021894	ENSFCAG00000046819	ENSFCAG00000021943	SPTLC1 (ENSFCAG00000004693)
Panthera	ANCESTRAL SPECIES	34	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155028.q.b.e.b	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.a.a.a.a	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000160540
Tiger	MODERN SPECIES	463					ENSPTIG00000015817 #9	ENSPTIG00000010794 #9	ENSPTIG00000009737 #11	VLDLR (ENSPTIG00000005593) #12	PUM3 (ENSPTIG00000021934) #14	ENSPTIG00000021167	RFX3 (ENSPTIG00000017617) #16	GLIS3 (ENSPTIG00000015969) #18	ENSPTIG00000014983	SLC1A1 (ENSPTIG00000013599) #19	SPATA6L (ENSPTIG00000011794) #20	CDC37L1 (ENSPTIG00000008469) #22	AK3 (ENSPTIG00000000703) #23	RCL1 (ENSPTIG00000019031) #24	JAK2 (ENSPTIG00000016939) #25	INSL6 (ENSPTIG00000016722) #27	ENSPTIG00000016439 #30	PLGRKT (ENSPTIG00000015914) #31	CD274 (ENSPTIG00000014398) #33	PDCD1LG2 (ENSPTIG00000013516) #34	RIC1 (ENSPTIG00000007073) #35	ERMP1 (ENSPTIG00000005202) #36	ENSPTIG00000012403
Panthera_a	ANCESTRAL SPECIES	35	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000160228	ENSGT00950000183043.a.b.b.a.a.a.a.a.a	ENSGT00550000074872	ENSGT00940000153947.A	ENSGT00940000160540
leopard	MODERN SPECIES	42	KANK1 (ENSPPRG00000002516)	DMRT1 (ENSPPRG00000002380)	DMRT3 (ENSPPRG00000002367) #7	DMRT2 (ENSPPRG00000002109) #8	SMARCA2 (ENSPPRG00000001879) #9	ENSPPRG00000001027 #11	VLDLR (ENSPPRG00000000915) #12	KCNV2 (ENSPPRG00000000862) #13	PUM3 (ENSPPRG00000000809) #14	ENSPPRG00000000748	RFX3 (ENSPPRG00000000606) #16	GLIS3 (ENSPPRG00000000400) #18	SLC1A1 (ENSPPRG00000000232) #19	SPATA6L (ENSPPRG00000000218) #20	PLPP6 (ENSPPRG00000019670) #21	CDC37L1 (ENSPPRG00000000059) #22	AK3 (ENSPPRG00000000041) #23	RCL1 (ENSPPRG00000022645) #24	JAK2 (ENSPPRG00000022744) #25	INSL6 (ENSPPRG00000022777) #27	PLGRKT (ENSPPRG00000022792) #31	CD274 (ENSPPRG00000022858) #33	PDCD1LG2 (ENSPPRG00000022891) #34	RIC1 (ENSPPRG00000022984) #35	ERMP1 (ENSPPRG00000023169) #36	ENSPPRG00000023237	SPTLC1 (ENSPPRG00000023598)	ROR2 (ENSPPRG00000023627)	NFIL3 (ENSPPRG00000019620)	AUH (ENSPPRG00000023647)	SYK (ENSPPRG00000023709)
lion	MODERN SPECIES	13	KANK1 (ENSPLOG00000016894)	DMRT1 (ENSPLOG00000017065)	DMRT3 (ENSPLOG00000017150) #7	DMRT2 (ENSPLOG00000017190) #8	SMARCA2 (ENSPLOG00000017478) #9	ENSPLOG00000017911 #11	VLDLR (ENSPLOG00000017962) #12	KCNV2 (ENSPLOG00000018027) #13	PUM3 (ENSPLOG00000018076) #14	ENSPLOG00000018220	RFX3 (ENSPLOG00000018336) #16	GLIS3 (ENSPLOG00000018479) #18	SLC1A1 (ENSPLOG00000018538) #19	SPATA6L (ENSPLOG00000018652) #20	PLPP6 (ENSPLOG00000018812) #21	CDC37L1 (ENSPLOG00000018840) #22	AK3 (ENSPLOG00000018913) #23	RCL1 (ENSPLOG00000019004) #24	JAK2 (ENSPLOG00000019062) #25	INSL6 (ENSPLOG00000019128) #27	ENSPLOG00000019152 #30	PLGRKT (ENSPLOG00000019176) #31	CD274 (ENSPLOG00000019211) #33	PDCD1LG2 (ENSPLOG00000019232) #34	RIC1 (ENSPLOG00000019269) #35	ERMP1 (ENSPLOG00000019376) #36	ENSPLOG00000019445	ENSPLOG00000019547	SPTLC1 (ENSPLOG00000011243)	ROR2 (ENSPLOG00000011343)	NFIL3 (ENSPLOG00000011410)
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Equus	ANCESTRAL SPECIES	37	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00520000061590 #11	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110.a
Donkey	MODERN SPECIES	15	DMRT3 (ENSEASG00005010303) #7	DMRT2 (ENSEASG00005010307) #8	ENSEASG00005032228 #9	ENSEASG00005033232 #9	ENSEASG00005010323 #11	VLDLR (ENSEASG00005010330) #12	KCNV2 (ENSEASG00005010348) #13	PUM3 (ENSEASG00005010350) #14	ENSEASG00005010361	ENSEASG00005010358	RFX3 (ENSEASG00005010402) #16	GLIS3 (ENSEASG00005010634) #18	SLC1A1 (ENSEASG00005010637) #19	PLPP6 (ENSEASG00005010645) #21	SPATA6L (ENSEASG00005010642) #20	CDC37L1 (ENSEASG00005010646) #22	AK3 (ENSEASG00005010651) #23	RCL1 (ENSEASG00005010653) #24	JAK2 (ENSEASG00005010656) #25	INSL6 (ENSEASG00005037792) #27	ENSEASG00005010659 #30	PLGRKT (ENSEASG00005034012) #31	CD274 (ENSEASG00005010663) #33	PDCD1LG2 (ENSEASG00005010667) #34	RIC1 (ENSEASG00005010673) #35	ERMP1 (ENSEASG00005010680) #36	MLANA (ENSEASG00005028588) #37	KIAA2026 (ENSEASG00005010685)	ENSEASG00005029347	IL33 (ENSEASG00005010691)	TPD52L3 (ENSEASG00005036119)
Horse	MODERN SPECIES	15	DMRT1 (ENSECAG00000060160)	DMRT3 (ENSECAG00000023412) #7	DMRT2 (ENSECAG00000035701) #8	ENSECAG00000047891 #9	ENSECAG00000045647 #9	VLDLR (ENSECAG00000021859) #12	ENSECAG00000037169 #11	KCNV2 (ENSECAG00000016602) #13	PUM3 (ENSECAG00000017193) #14	ENSECAG00000009736	RFX3 (ENSECAG00000011075) #16	GLIS3 (ENSECAG00000020544) #18	SLC1A1 (ENSECAG00000010935) #19	SPATA6L (ENSECAG00000021902) #20	PLPP6 (ENSECAG00000023969) #21	CDC37L1 (ENSECAG00000000269) #22	AK3 (ENSECAG00000011235) #23	ENSECAG00000058759	RCL1 (ENSECAG00000015973) #24	JAK2 (ENSECAG00000009119) #25	INSL6 (ENSECAG00000053846) #27	PLGRKT (ENSECAG00000015003) #30	PLGRKT (ENSECAG00000051327) #31	CD274 (ENSECAG00000016312) #33	PDCD1LG2 (ENSECAG00000020578) #34	RIC1 (ENSECAG00000006558) #35	ERMP1 (ENSECAG00000018498) #36	MLANA (ENSECAG00000009103) #37	KIAA2026 (ENSECAG00000006216)	RANBP6 (ENSECAG00000006243)	IL33 (ENSECAG00000010475)
Chiroptera	ANCESTRAL SPECIES	40	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Microchiroptera	ANCESTRAL SPECIES	36	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Greater horseshoe bat	MODERN SPECIES	3	KANK1 (ENSRFEG00010006153)	DMRT1 (ENSRFEG00010006049)	DMRT3 (ENSRFEG00010006020) #7	DMRT2 (ENSRFEG00010005950) #8	SMARCA2 (ENSRFEG00010005719) #9	VLDLR (ENSRFEG00010005438) #12	KCNV2 (ENSRFEG00010005355) #13	ENSRFEG00010005315 #14	ENSRFEG00010005258	RFX3 (ENSRFEG00010005210) #16	GLIS3 (ENSRFEG00010005187) #18	SLC1A1 (ENSRFEG00010005159) #19	ENSRFEG00010005145	PLPP6 (ENSRFEG00010005138) #21	SPATA6L (ENSRFEG00010005120) #20	CDC37L1 (ENSRFEG00010015324) #22	AK3 (ENSRFEG00010015150) #23	RCL1 (ENSRFEG00010015039) #24	JAK2 (ENSRFEG00010014972) #25	INSL6 (ENSRFEG00010014917) #27	ENSRFEG00010014899 #30	ENSRFEG00010014826 #30	ENSRFEG00010014802	PLGRKT (ENSRFEG00010014761) #31	CD274 (ENSRFEG00010014726) #33	PDCD1LG2 (ENSRFEG00010014656) #34	RIC1 (ENSRFEG00010014565) #35	ERMP1 (ENSRFEG00010014298) #36	MLANA (ENSRFEG00010014270) #37	KIAA2026 (ENSRFEG00010013980)	ENSRFEG00010013907
Microbat	MODERN SPECIES	1067					SMARCA2 (ENSMLUG00000002342) #9	VLDLR (ENSMLUG00000002294) #12	KCNV2 (ENSMLUG00000002304) #13	PUM3 (ENSMLUG00000002309) #14	ENSMLUG00000022735	RFX3 (ENSMLUG00000013765) #16	ENSMLUG00000030513 #18	ENSMLUG00000014482 #18	ENSMLUG00000012988 #19	SPATA6L (ENSMLUG00000012996) #20	PLPP6 (ENSMLUG00000017269) #21	CDC37L1 (ENSMLUG00000017270) #22	AK3 (ENSMLUG00000017272) #23	RCL1 (ENSMLUG00000009654) #24	JAK2 (ENSMLUG00000012756) #25	INSL6 (ENSMLUG00000007982) #27	ENSMLUG00000009569 #30	PLGRKT (ENSMLUG00000009582) #31	CD274 (ENSMLUG00000009607) #33	PDCD1LG2 (ENSMLUG00000009533) #34	RIC1 (ENSMLUG00000002399) #35	ERMP1 (ENSMLUG00000002419) #36
Megabat	MODERN SPECIES	3886													SLC1A1 (ENSPVAG00000015747) #19	SPATA6L (ENSPVAG00000015748) #20	PLPP6 (ENSPVAG00000015749) #21	CDC37L1 (ENSPVAG00000015750) #22	AK3 (ENSPVAG00000015751) #23	RCL1 (ENSPVAG00000015752) #24
Atlantogenata	ANCESTRAL SPECIES	68	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00900000143153	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00940000162767	ENSGT00390000005185	ENSGT00940000163110
Afrotheria	ANCESTRAL SPECIES	145	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896.n #18	ENSGT00940000156896.m #18	ENSGT00900000143153	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27
Afrotheria_a	ANCESTRAL SPECIES	145	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896.n #18	ENSGT00940000156896.m #18	ENSGT00900000143153	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27
Elephant	MODERN SPECIES	593	ENSLAFG00000031278	ENSLAFG00000010638	DMRT3 (ENSLAFG00000028125) #7	DMRT2 (ENSLAFG00000008510) #8	SMARCA2 (ENSLAFG00000014061) #9	VLDLR (ENSLAFG00000015211) #12	KCNV2 (ENSLAFG00000017292) #13	PUM3 (ENSLAFG00000017341) #14	RFX3 (ENSLAFG00000021602) #16	ENSLAFG00000031654 #18	ENSLAFG00000029971 #18	ENSLAFG00000026125	SLC1A1 (ENSLAFG00000001120) #19	PLPP6 (ENSLAFG00000001123) #21	SPATA6L (ENSLAFG00000001121) #20	CDC37L1 (ENSLAFG00000001125) #22	AK3 (ENSLAFG00000001126) #23	RCL1 (ENSLAFG00000017495) #24	JAK2 (ENSLAFG00000007471) #25	INSL6 (ENSLAFG00000007479) #27	ABO (ENSLAFG00000010293)	SURF6 (ENSLAFG00000026419)	MED22 (ENSLAFG00000002513)	ENSLAFG00000006436	ENSLAFG00000016963	STKLD1 (ENSLAFG00000008238)	REXO4 (ENSLAFG00000011274)	ADAMTS13 (ENSLAFG00000011278)	CACFD1 (ENSLAFG00000005395)	SLC2A6 (ENSLAFG00000005401)	MYMK (ENSLAFG00000016453)
Tenrec	MODERN SPECIES	1009																CDC37L1 (ENSETEG00000006523) #22
Xenarthra	ANCESTRAL SPECIES	76							ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907 #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434.b #27	ENSGT00940000154434.a #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000011483	ENSGT00390000005185	ENSGT00940000163110	ENSGT00390000008296.b.a.a	ENSGT00390000017970
Armadillo	MODERN SPECIES	1454		ST8SIA4 (ENSDNOG00000046147)	ENSDNOG00000040306	SMARCA2 (ENSDNOG00000006402) #9	VLDLR (ENSDNOG00000001086) #12	KCNV2 (ENSDNOG00000041737) #13	PUM3 (ENSDNOG00000008157) #14	RFX3 (ENSDNOG00000018668) #16	ENSDNOG00000012636 #18	ENSDNOG00000042655	ENSDNOG00000035748 #18	ENSDNOG00000042157	SLC1A1 (ENSDNOG00000001798) #19	SPATA6L (ENSDNOG00000038916) #20	PLPP6 (ENSDNOG00000015974) #21	CDC37L1 (ENSDNOG00000015975) #22	AK3 (ENSDNOG00000038787) #23	RCL1 (ENSDNOG00000019911) #24	JAK2 (ENSDNOG00000008173) #25	ENSDNOG00000001668 #27	ENSDNOG00000036090 #30	ENSDNOG00000042926 #31	CD274 (ENSDNOG00000018655) #33	PDCD1LG2 (ENSDNOG00000031933) #34	ENSDNOG00000036232	ENSDNOG00000034768	RIC1 (ENSDNOG00000042438) #35	ERMP1 (ENSDNOG00000015251) #36	KIAA2026 (ENSDNOG00000048191)	ENSDNOG00000003491	ENSDNOG00000049546
Sloth	MODERN SPECIES	780														ENSCHOG00000002951 #20	PLPP6 (ENSCHOG00000002960) #21	CDC37L1 (ENSCHOG00000002962) #22
Marsupialia	ANCESTRAL SPECIES	6	ENSGT00940000162728	ENSGT00390000000306	ENSGT00390000012605	ENSGT00550000074873	ENSGT00410000025739.c.a	ENSGT00940000153882.a.b.b.a	ENSGT00390000011149	ENSGT00940000155289.C.a.a.b	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907.a #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00390000003343
Marsupialia_b	ANCESTRAL SPECIES	11	ENSGT00940000162728	ENSGT00390000000306	ENSGT00390000012605	ENSGT00550000074873	ENSGT00410000025739.c.a	ENSGT00940000153882.a.b.b.a	ENSGT00390000011149	ENSGT00940000155289.C.a.a.b	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907.a #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00390000003343
Diprotodontia	ANCESTRAL SPECIES	19	ENSGT00940000162728	ENSGT00390000000306	ENSGT00390000012605	ENSGT00550000074873	ENSGT00410000025739.c.a	ENSGT00940000153882.a.b.b.a	ENSGT00390000011149	ENSGT00940000155289.C.a.a.b	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907.a #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00390000003343
Wallaby	MODERN SPECIES	1642																ENSMEUG00000001784 #22
Diprotodontia_a	ANCESTRAL SPECIES	21	ENSGT00940000162728	ENSGT00390000000306	ENSGT00390000012605	ENSGT00550000074873	ENSGT00410000025739.c.a	ENSGT00940000153882.a.b.b.a	ENSGT00390000011149	ENSGT00940000155289.C.a.a.b	ENSGT00390000015757.w #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00940000160907.a #21	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00390000003343
koala	MODERN SPECIES	113	ENSPCIG00000030545	AMDHD2 (ENSPCIG00000030546)	TBC1D24 (ENSPCIG00000030548)	NTN3 (ENSPCIG00000030549)	ENSPCIG00000030550	ENSPCIG00000030552	PUM3 (ENSPCIG00000030598) #14	ENSPCIG00000030606	RFX3 (ENSPCIG00000024087) #16	ENSPCIG00000024086 #18	ENSPCIG00000032109 #18	SLC1A1 (ENSPCIG00000001803) #19	ENSPCIG00000025425 #21	ENSPCIG00000025428 #21	ENSPCIG00000035241 #20	CDC37L1 (ENSPCIG00000000083) #22	ENSPCIG00000000144 #23	RCL1 (ENSPCIG00000000188) #24	JAK2 (ENSPCIG00000000252) #25	ENSPCIG00000036019 #30	ENSPCIG00000034412 #30	PLGRKT (ENSPCIG00000008213) #31	ENSPCIG00000000288 #33	ENSPCIG00000000358	ENSPCIG00000000400 #34	RIC1 (ENSPCIG00000000440) #35	ERMP1 (ENSPCIG00000000514) #36	MLANA (ENSPCIG00000016664) #37	KIAA2026 (ENSPCIG00000016666)	UHRF2 (ENSPCIG00000009528)	GLDC (ENSPCIG00000032529)
Common wonbat	MODERN SPECIES	1009	ZNF316 (ENSVURG00010007148)	ENSVURG00010007142	ENSVURG00010007136	AMDHD2 (ENSVURG00010007093)	ENSVURG00010007067	TBC1D24 (ENSVURG00010007018)	NTN3 (ENSVURG00010007004)	ENSVURG00010006992	ENSVURG00010006968	ENSVURG00010006948 #14	RFX3 (ENSVURG00010006911) #16	GLIS3 (ENSVURG00010006895) #18	SLC1A1 (ENSVURG00010006864) #19	ENSVURG00010006853 #20	PLPP6 (ENSVURG00010006844) #21	CDC37L1 (ENSVURG00010006832) #22	AK3 (ENSVURG00010006826) #23	RCL1 (ENSVURG00010006818) #24	JAK2 (ENSVURG00010006805) #25	PLGRKT (ENSVURG00010006799) #31	CD274 (ENSVURG00010006794) #33	RIC1 (ENSVURG00010006750) #35	ERMP1 (ENSVURG00010006720) #36	MLANA (ENSVURG00010006707) #37	KIAA2026 (ENSVURG00010006687)	UHRF2 (ENSVURG00010006652)	GLDC (ENSVURG00010005739)	KDM4C (ENSVURG00010005641)	ENSVURG00010005615	PTPRD (ENSVURG00010005527)	ENSVURG00010005463
Tasmanian devil	MODERN SPECIES		ENSSHAG00000013445	ENSSHAG00000027414	ATP6V0C (ENSSHAG00000014251)	ENSSHAG00000014430	ENSSHAG00000025501	ENSSHAG00000031126	ENSSHAG00000000892	ENSSHAG00000003730 #14	ENSSHAG00000002395	RFX3 (ENSSHAG00000003775) #16	ENSSHAG00000028825	GLIS3 (ENSSHAG00000030971) #18	SLC1A1 (ENSSHAG00000012371) #19	PLPP6 (ENSSHAG00000026797) #21	ENSSHAG00000012947 #20	CDC37L1 (ENSSHAG00000013393) #22	AK3 (ENSSHAG00000028635) #23	ENSSHAG00000029924	RCL1 (ENSSHAG00000014086) #24	JAK2 (ENSSHAG00000014900) #25	ENSSHAG00000015262 #30	PLGRKT (ENSSHAG00000001757) #31	CD274 (ENSSHAG00000002682) #33	ENSSHAG00000004176 #34	RIC1 (ENSSHAG00000000924) #35	ERMP1 (ENSSHAG00000004720) #36	MLANA (ENSSHAG00000006138) #37	KIAA2026 (ENSSHAG00000030776)	ENSSHAG00000031943	UHRF2 (ENSSHAG00000023237)	GLDC (ENSSHAG00000005373)
Opossum	MODERN SPECIES	5	NTN3 (ENSMODG00000015434)	ENSMODG00000015432	ENSMODG00000015420	PBK (ENSMODG00000015425)	PUM3 (ENSMODG00000015417) #14	ENSMODG00000015412	RFX3 (ENSMODG00000015410) #16	ENSMODG00000039449	ENSMODG00000044455	GLIS3 (ENSMODG00000015403) #18	ENSMODG00000045366	SLC1A1 (ENSMODG00000015399) #19	ENSMODG00000025440 #20	ENSMODG00000051594 #21	ENSMODG00000022953 #21	CDC37L1 (ENSMODG00000015385) #22	AK3 (ENSMODG00000042741) #23	ENSMODG00000029481	RCL1 (ENSMODG00000015377) #24	JAK2 (ENSMODG00000015373) #25	RFLB (ENSMODG00000048062) #30	PLGRKT (ENSMODG00000015353) #31	ENSMODG00000015352 #33	ENSMODG00000015349 #34	RIC1 (ENSMODG00000015344) #35	ERMP1 (ENSMODG00000015324) #36	MLANA (ENSMODG00000015296) #37	KIAA2026 (ENSMODG00000015293)	ENSMODG00000022954	UHRF2 (ENSMODG00000015238)	GLDC (ENSMODG00000015225)
Platypus	MODERN SPECIES	88	KANK1 (ENSOANG00000008293)	DMRT1 (ENSOANG00000036834)	DMRT3 (ENSOANG00000008295) #7	DMRT2 (ENSOANG00000008296) #8	ENSOANG00000008297	SMARCA2 (ENSOANG00000008299) #9	VLDLR (ENSOANG00000014993) #12	KCNV2 (ENSOANG00000014994) #13	PUM3 (ENSOANG00000014995) #14	ENSOANG00000043031	RFX3 (ENSOANG00000014996) #16	GLIS3 (ENSOANG00000014997) #18	SLC1A1 (ENSOANG00000013192) #19	ENSOANG00000039420 #21	ENSOANG00000036739 #20	CDC37L1 (ENSOANG00000001511) #22	ENSOANG00000049559	AK3 (ENSOANG00000001505) #23	RCL1 (ENSOANG00000013193) #24	JAK2 (ENSOANG00000010092) #25	ENSOANG00000031851 #30	PLGRKT (ENSOANG00000013191) #31	CD274 (ENSOANG00000010091) #33	ENSOANG00000010090 #34	RIC1 (ENSOANG00000010088) #35	ERMP1 (ENSOANG00000010083) #36	MLANA (ENSOANG00000036136) #37	KIAA2026 (ENSOANG00000015760)	UHRF2 (ENSOANG00000001083)	GLDC (ENSOANG00000041168)	ENSOANG00000001081
Sauria	ANCESTRAL SPECIES	5	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00910000144227.t	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930
Archosauria	ANCESTRAL SPECIES	31	ENSGT00940000154886.a.a	ENSGT00910000144227.t	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930
Aves	ANCESTRAL SPECIES	45	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b.e #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930
Neognathae	ANCESTRAL SPECIES	12	ENSGT00950000185125	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b.e #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930
Galloanserae	ANCESTRAL SPECIES	11	ENSGT00640000091523	ENSGT00950000185125	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b.e #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154396.a	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D
Anatidae	ANCESTRAL SPECIES	20	ENSGT00940000158126	ENSGT00640000091523	ENSGT00950000185125	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b.e #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154396.a	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930
Duck	MODERN SPECIES	4281	ENSAPLG00000012182	ENSAPLG00000025062	ENSAPLG00000017480	ENSAPLG00000012724	KANK1 (ENSAPLG00000020411)	DMRT3 (ENSAPLG00000013743) #7	DMRT2 (ENSAPLG00000013872) #8	SMARCA2 (ENSAPLG00000013873) #9	ENSAPLG00000015474 #12	KCNV2 (ENSAPLG00000018126) #13	PUM3 (ENSAPLG00000002920) #14	ENSAPLG00000019362	RFX3 (ENSAPLG00000011096) #16	GLIS3 (ENSAPLG00000014844) #18	SLC1A1 (ENSAPLG00000015022) #19	CDC37L1 (ENSAPLG00000006614) #22	AK3 (ENSAPLG00000006356) #23	RCL1 (ENSAPLG00000006031) #24	JAK2 (ENSAPLG00000004748) #25	ENSAPLG00000011419	PLGRKT (ENSAPLG00000018947) #31	ENSAPLG00000004669 #34	PDCD1LG2 (ENSAPLG00000004593) #34	RIC1 (ENSAPLG00000004154) #35	ENSAPLG00000028854 #36	ENSAPLG00000030581 #36	ENSAPLG00000003923	MLANA (ENSAPLG00000003877) #37	KIAA2026 (ENSAPLG00000003748)	UHRF2 (ENSAPLG00000013042)	GLDC (ENSAPLG00000012359)
Pink-footed goose	MODERN SPECIES	226																CDC37L1 (ENSABRG00000021710) #22	AK3 (ENSABRG00000021713) #23	RCL1 (ENSABRG00000021715) #24	JAK2 (ENSABRG00000021718) #25	ENSABRG00000021725	PLGRKT (ENSABRG00000021727) #31	ENSABRG00000021729 #34	PDCD1LG2 (ENSABRG00000021731) #34	RIC1 (ENSABRG00000021746) #35	ERMP1 (ENSABRG00000021779) #36	ENSABRG00000021780	MLANA (ENSABRG00000021784) #37	KIAA2026 (ENSABRG00000021786)	UHRF2 (ENSABRG00000021791)	GLDC (ENSABRG00000021793)	KDM4C (ENSABRG00000021794)
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00940000158126	ENSGT00640000091523	ENSGT00940000155876.e.a	ENSGT00940000154886.a.a.db.a	ENSGT00940000154886.a.a.db.b	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b.e #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154396.a	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D	ENSGT00940000155804
Japanese quail	MODERN SPECIES	699	TMEM252 (ENSCJPG00005002105)	PGM5 (ENSCJPG00005002107)	ENSCJPG00005002115	DOCK8 (ENSCJPG00005002158)	KANK1 (ENSCJPG00005002171)	DMRT1 (ENSCJPG00005002189)	DMRT3 (ENSCJPG00005002191) #7	DMRT2 (ENSCJPG00005002194) #8	SMARCA2 (ENSCJPG00005002199) #9	VLDLR (ENSCJPG00005002212) #12	KCNV2 (ENSCJPG00005003166) #13	PUM3 (ENSCJPG00005003170) #14	RFX3 (ENSCJPG00005003180) #16	GLIS3 (ENSCJPG00005003188) #18	SLC1A1 (ENSCJPG00005003195) #19	CDC37L1 (ENSCJPG00005003200) #22	AK3 (ENSCJPG00005003204) #23	RCL1 (ENSCJPG00005003205) #24	JAK2 (ENSCJPG00005003214) #25	ENSCJPG00005003229	ENSCJPG00005003230 #34	PDCD1LG2 (ENSCJPG00005003231) #34	RIC1 (ENSCJPG00005003232) #35	ERMP1 (ENSCJPG00005003237) #36	ENSCJPG00005003242	MLANA (ENSCJPG00005003245) #37	KIAA2026 (ENSCJPG00005003247)	UHRF2 (ENSCJPG00005003255)	GLDC (ENSCJPG00005003257)	ENSCJPG00005003260	ENSCJPG00005003265
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00940000155897.mb.a	ENSGT00390000005250	ENSGT00940000158126	ENSGT00640000091523	ENSGT00940000155876.e.a	ENSGT00940000154886.a.a.db.a	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT01050000244879.a.a.b.e #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154396.a	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D	ENSGT00940000155804
Chicken	MODERN SPECIES	131	TMEM252 (ENSGALG00010011444)	PGM5 (ENSGALG00010011887)	CBWD1 (ENSGALG00010011287)	DOCK8 (ENSGALG00010011311)	KANK1 (ENSGALG00010011351)	DMRT1 (ENSGALG00010011437) #7	ENSGALG00010011462	DMRT2 (ENSGALG00010011482) #8	SMARCA2 (ENSGALG00010011808) #9	VLDLR (ENSGALG00010011837) #12	KCNV2 (ENSGALG00010010198) #13	PUM3 (ENSGALG00010011384) #14	RFX3 (ENSGALG00010011873) #16	GLIS3 (ENSGALG00010010147) #18	SLC1A1 (ENSGALG00010011937) #19	CDC37L1 (ENSGALG00010011133) #22	AK3 (ENSGALG00010011143) #23	RCL1 (ENSGALG00010011222) #24	JAK2 (ENSGALG00010012833) #25	RLN3 (ENSGALG00010012847)	CD274 (ENSGALG00010012871) #34	PDCD1LG2 (ENSGALG00010013312) #34	RIC1 (ENSGALG00010012889) #35	ERMP1 (ENSGALG00010012904) #36	ENSGALG00010012919	MLANA (ENSGALG00010012923) #37	KIAA2026 (ENSGALG00010012952)	UHRF2 (ENSGALG00010012965)	GLDC (ENSGALG00010012973)	KDM4C (ENSGALG00010011253)	PTPRD (ENSGALG00010012063)
Turkey	MODERN SPECIES	1299	ENSMGAG00000022224	ENSMGAG00000005135	ENSMGAG00000018973	ENSMGAG00000017142	ENSMGAG00000020678	ENSMGAG00000019468	ENSMGAG00000005156	ENSMGAG00000021756	ENSMGAG00000016103 #8	ENSMGAG00000002255 #14	KCNV2 (ENSMGAG00000001039) #13	VLDLR (ENSMGAG00000003673) #12	ENSMGAG00000016991 #9	ENSMGAG00000019982	SLC1A1 (ENSMGAG00000005250) #19	CDC37L1 (ENSMGAG00000005316) #22	AK3 (ENSMGAG00000005306) #23	ENSMGAG00000021960 #24	ENSMGAG00000002245 #24	JAK2 (ENSMGAG00000005291) #25	ENSMGAG00000016647	ENSMGAG00000005340 #34	PDCD1LG2 (ENSMGAG00000020864) #34	RIC1 (ENSMGAG00000005427) #35	ERMP1 (ENSMGAG00000005374) #36	ENSMGAG00000005367	MLANA (ENSMGAG00000005363) #37	KIAA2026 (ENSMGAG00000021166)	UHRF2 (ENSMGAG00000007128)	GLDC (ENSMGAG00000009587)	ENSMGAG00000003348
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00640000091523	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b.e #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930
Passeriformes	ANCESTRAL SPECIES	7	ENSGT00640000091523	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000162777.a.a.a.a	ENSGT01050000244879.a.a.b.e #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930
Great tit	MODERN SPECIES	642	ENSPMJG00000016189	DOCK8 (ENSPMJG00000016190)	KANK1 (ENSPMJG00000016191)	DMRT1 (ENSPMJG00000016192)	DMRT2 (ENSPMJG00000016193) #8	SMARCA2 (ENSPMJG00000016196) #9	VLDLR (ENSPMJG00000016197) #12	KCNV2 (ENSPMJG00000016198) #13	PUM3 (ENSPMJG00000016199) #14	ENSPMJG00000016200	RFX3 (ENSPMJG00000016201) #16	GLIS3 (ENSPMJG00000016202) #18	SLC1A1 (ENSPMJG00000016203) #19	ENSPMJG00000016204	ENSPMJG00000016205	CDC37L1 (ENSPMJG00000016206) #22	AK3 (ENSPMJG00000016207) #23	RCL1 (ENSPMJG00000016208) #24	JAK2 (ENSPMJG00000016210) #25	ENSPMJG00000016211 #30	PLGRKT (ENSPMJG00000016212) #31	CD274 (ENSPMJG00000016213) #33	PDCD1LG2 (ENSPMJG00000016214) #34	RIC1 (ENSPMJG00000016216) #35	ERMP1 (ENSPMJG00000016217) #36	ENSPMJG00000016226	MLANA (ENSPMJG00000016227) #37	KIAA2026 (ENSPMJG00000016228)	UHRF2 (ENSPMJG00000016230)	GLDC (ENSPMJG00000016231)	KDM4C (ENSPMJG00000016232)
Passeriformes_d	ANCESTRAL SPECIES	6	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000162777.a.a.a.a	ENSGT01050000244879.a.a.b.e #16	ENSGT01100000265023	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a.k #24	ENSGT00940000155640 #25	ENSGT00940000169000	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930
Flycatcher	MODERN SPECIES	561	DMRT3 (ENSFALG00000010391) #7	DMRT2 (ENSFALG00000010393) #8	ENSFALG00000023612	SMARCA2 (ENSFALG00000010416) #9	VLDLR (ENSFALG00000010477) #12	KCNV2 (ENSFALG00000010508) #13	PUM3 (ENSFALG00000010509) #14	ENSFALG00000010512	RFX3 (ENSFALG00000010515) #16	ENSFALG00000027595	GLIS3 (ENSFALG00000010519) #18	SLC1A1 (ENSFALG00000010522) #19	ENSFALG00000014597	ENSFALG00000010526	ENSFALG00000010531	CDC37L1 (ENSFALG00000023426) #22	AK3 (ENSFALG00000010543) #23	ENSFALG00000025956	ENSFALG00000010553 #24	ENSFALG00000027655 #24	JAK2 (ENSFALG00000010563) #25	ENSFALG00000026503	PLGRKT (ENSFALG00000010567) #31	ENSFALG00000010572 #33	RIC1 (ENSFALG00000010582) #35	ERMP1 (ENSFALG00000010587) #36	ENSFALG00000010596	MLANA (ENSFALG00000028522) #37	KIAA2026 (ENSFALG00000010612)	UHRF2 (ENSFALG00000010614)	GLDC (ENSFALG00000010628)
Passeriformes_g	ANCESTRAL SPECIES	7	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000162777.a.a.a.a	ENSGT01050000244879.a.a.b.e #16	ENSGT01100000265023	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00940000155319.g.b.a.b	ENSGT00960000189358	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a.k #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D
Medium ground finch	MODERN SPECIES	93											GLIS3 (ENSGFOG00000011299) #18	SLC1A1 (ENSGFOG00000011302) #19	ENSGFOG00000011306	ENSGFOG00000011312	ENSGFOG00000011313	CDC37L1 (ENSGFOG00000011314) #22	AK3 (ENSGFOG00000011319) #23	RCL1 (ENSGFOG00000011325) #24	JAK2 (ENSGFOG00000011351) #25	CD274 (ENSGFOG00000012364) #33	PDCD1LG2 (ENSGFOG00000000042) #34	RIC1 (ENSGFOG00000000248) #35	ERMP1 (ENSGFOG00000000270) #36	ENSGFOG00000000282	MLANA (ENSGFOG00000000290) #37	KIAA2026 (ENSGFOG00000000299)	UHRF2 (ENSGFOG00000000326)	GLDC (ENSGFOG00000000409)	KDM4C (ENSGFOG00000000523)	PTPRD (ENSGFOG00000000568)
Passeroidea	ANCESTRAL SPECIES	23	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000162777.a.a.a.a	ENSGT01050000244879.a.a.b.e #16	ENSGT01100000265023	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00940000155319.g.b.a.b	ENSGT00960000189358	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a.k #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00940000169000	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D
Zebra finch	MODERN SPECIES	104	DMRT2 (ENSTGUG00000005515) #8	SMARCA2 (ENSTGUG00000005460) #9	VLDLR (ENSTGUG00000005386) #12	ENSTGUG00000005381	KCNV2 (ENSTGUG00000018853) #13	PUM3 (ENSTGUG00000005339) #14	ENSTGUG00000005327	RFX3 (ENSTGUG00000005287) #16	ENSTGUG00000022949	ENSTGUG00000024012	GLIS3 (ENSTGUG00000005266) #18	SLC1A1 (ENSTGUG00000005214) #19	ENSTGUG00000005203	ENSTGUG00000019342	ENSTGUG00000029693	CDC37L1 (ENSTGUG00000005189) #22	AK3 (ENSTGUG00000005155) #23	RCL1 (ENSTGUG00000005138) #24	JAK2 (ENSTGUG00000005043) #25	ENSTGUG00000005041	ENSTGUG00000005033 #34	PDCD1LG2 (ENSTGUG00000025704) #34	RIC1 (ENSTGUG00000005013) #35	ERMP1 (ENSTGUG00000004990) #36	ENSTGUG00000004979	MLANA (ENSTGUG00000025611) #37	KIAA2026 (ENSTGUG00000004976)	UHRF2 (ENSTGUG00000004941)	GLDC (ENSTGUG00000004885)	KDM4C (ENSTGUG00000004875)	ENSTGUG00000019018
Common canary	DUPLICATION
Common canary	MODERN SPECIES	8	CLASP1 (ENSSCAG00000011981)	TFCP2L1 (ENSSCAG00000012018)	ENSSCAG00000012138	INHBB (ENSSCAG00000012147)	RALB (ENSSCAG00000012158)	ENSSCAG00000012164	EPB41L5 (ENSSCAG00000012183)	PTPN4 (ENSSCAG00000012204)	TMEM177 (ENSSCAG00000012229)	MRAS (ENSSCAG00000012240)	CNTNAP5 (ENSSCAG00000012280)	GYPC (ENSSCAG00000012425)	BIN1 (ENSSCAG00000012432)	CYP27C1 (ENSSCAG00000012448)	ERCC3 (ENSSCAG00000012453)	ENSSCAG00000012460 #22	MAP3K2 (ENSSCAG00000012489)	PECR (ENSSCAG00000012493)	TMEM169 (ENSSCAG00000012497)	XRCC5 (ENSSCAG00000012499)	MARCHF4 (ENSSCAG00000012501)	SMARCAL1 (ENSSCAG00000012512)	ENSSCAG00000012520	IGFBP2 (ENSSCAG00000012525)	ENSSCAG00000012528	ENSSCAG00000012569	ENSSCAG00000012691	RUFY4 (ENSSCAG00000012856)	ENSSCAG00000012859	ARPC2 (ENSSCAG00000012860)	AAMP (ENSSCAG00000012865)
Common canary	MODERN SPECIES	78							MLANA (ENSSCAG00000001433) #37	KIAA2026 (ENSSCAG00000001403)	UHRF2 (ENSSCAG00000001304)	GLDC (ENSSCAG00000001260)	ENSSCAG00000001245	GLIS3 (ENSSCAG00000001222) #18	SLC1A1 (ENSSCAG00000001213) #19	ENSSCAG00000001207	ENSSCAG00000001199	ENSSCAG00000001187 #22	AK3 (ENSSCAG00000001174) #23	RCL1 (ENSSCAG00000001093) #24	JAK2 (ENSSCAG00000000972) #25	ENSSCAG00000000933 #30	ENSSCAG00000000913 #34	PDCD1LG2 (ENSSCAG00000000891) #34	RIC1 (ENSSCAG00000000523) #35	ERMP1 (ENSSCAG00000000280) #36	ENSSCAG00000000200
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00940000158126	ENSGT00640000091523	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b.e #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D
Golden eagle	MODERN SPECIES	91	ENSACCG00020016750	DOCK8 (ENSACCG00020016450)	ENSACCG00020014971	ENSACCG00020014951	DMRT1 (ENSACCG00020014930)	DMRT3 (ENSACCG00020014910) #7	DMRT2 (ENSACCG00020014901) #8	SMARCA2 (ENSACCG00020014838) #9	VLDLR (ENSACCG00020014749) #12	KCNV2 (ENSACCG00020014716) #13	PUM3 (ENSACCG00020014700) #14	ENSACCG00020014683	RFX3 (ENSACCG00020014653) #16	GLIS3 (ENSACCG00020014613) #18	SLC1A1 (ENSACCG00020014593) #19	CDC37L1 (ENSACCG00020014575) #22	AK3 (ENSACCG00020014563) #23	RCL1 (ENSACCG00020014540) #24	JAK2 (ENSACCG00020014493) #25	ENSACCG00020014475 #30	PLGRKT (ENSACCG00020014461) #31	ENSACCG00020014444 #34	PDCD1LG2 (ENSACCG00020014424) #34	RIC1 (ENSACCG00020014383) #35	ERMP1 (ENSACCG00020014143) #36	ENSACCG00020014001	MLANA (ENSACCG00020013991) #37	KIAA2026 (ENSACCG00020013976)	UHRF2 (ENSACCG00020013943)	GLDC (ENSACCG00020013912)	KDM4C (ENSACCG00020013865)
Kakapo	MODERN SPECIES	19	PTPRD (ENSSHBG00005017319)	ENSSHBG00005017356	ENSSHBG00005017358	GLDC (ENSSHBG00005017361)	UHRF2 (ENSSHBG00005017370)	KIAA2026 (ENSSHBG00005017376)	MLANA (ENSSHBG00005017380) #37	ENSSHBG00005017383	ERMP1 (ENSSHBG00005017385) #36	RIC1 (ENSSHBG00005017400) #35	PDCD1LG2 (ENSSHBG00005017476) #34	ENSSHBG00005017481 #30	JAK2 (ENSSHBG00005017499) #25	RCL1 (ENSSHBG00005017541) #24	SLC1A1 (ENSSHBG00005017548) #19	CDC37L1 (ENSSHBG00005017553) #22	AK3 (ENSSHBG00005017556) #23	GLIS3 (ENSSHBG00005017563) #18	ENSSHBG00005017571 #16	ENSSHBG00005017578	PUM3 (ENSSHBG00005017598) #14	KCNV2 (ENSSHBG00005017626) #13	VLDLR (ENSSHBG00005017636) #12	SMARCA2 (ENSSHBG00005017989) #9	DMRT2 (ENSSHBG00005020185) #8	DMRT3 (ENSSHBG00005020188) #7	DMRT1 (ENSSHBG00005020193)	ENSSHBG00005020196	ENSSHBG00005020200	DOCK8 (ENSSHBG00005020306)	ENSSHBG00005020597
African ostrich	DUPLICATION
African ostrich	MODERN SPECIES	517																ENSSCUG00000006779 #22
African ostrich	MODERN SPECIES	535													TOPORS (ENSSCUG00000004599)	SLC1A1 (ENSSCUG00000004590) #19	SPATA6L (ENSSCUG00000004585) #20	ENSSCUG00000004577 #22	AK3 (ENSSCUG00000004569) #23	RCL1 (ENSSCUG00000004564) #24	JAK2 (ENSSCUG00000004554) #25	PLGRKT (ENSSCUG00000004547) #31
Australian saltwater crocodile	MODERN SPECIES	67	DOCK8 (ENSCPRG00005004968)	KANK1 (ENSCPRG00005004939)	DMRT1 (ENSCPRG00005004893)	DMRT3 (ENSCPRG00005004879) #7	DMRT2 (ENSCPRG00005004868) #8	SMARCA2 (ENSCPRG00005004803) #9	ENSCPRG00005004774	VLDLR (ENSCPRG00005004758) #12	KCNV2 (ENSCPRG00005004751) #13	PUM3 (ENSCPRG00005004547) #14	ENSCPRG00005004519	RFX3 (ENSCPRG00005004493) #16	GLIS3 (ENSCPRG00005004466) #18	SLC1A1 (ENSCPRG00005004424) #19	SPATA6L (ENSCPRG00005004407) #20	CDC37L1 (ENSCPRG00005004396) #22	AK3 (ENSCPRG00005004395) #23	RCL1 (ENSCPRG00005004387) #24	JAK2 (ENSCPRG00005004373) #25	ENSCPRG00005004371 #30	PLGRKT (ENSCPRG00005004366) #31	ENSCPRG00005004356 #34	PDCD1LG2 (ENSCPRG00005004350) #34	RIC1 (ENSCPRG00005004338) #35	ERMP1 (ENSCPRG00005004304) #36	KIAA2026 (ENSCPRG00005004297)	UHRF2 (ENSCPRG00005004283)	GLDC (ENSCPRG00005003953)	KDM4C (ENSCPRG00005003854)	PTPRD (ENSCPRG00005003783)	TYRP1 (ENSCPRG00005003740)
Cryptodira	ANCESTRAL SPECIES	48	ENSGT00940000154886.a.a	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00390000011483
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00940000154886.a.a	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00940000158577	ENSGT00390000003364	ENSGT00940000156437.i	ENSGT00390000008742
Testudinidae	ANCESTRAL SPECIES	15	ENSGT00940000155876	ENSGT00940000154886.a.a.ib	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757.c #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00940000158577	ENSGT00390000003364	ENSGT00940000156437.i	ENSGT00390000008742	ENSGT00940000157487
Goode s thornscrub tortoise	MODERN SPECIES	20	ENSGEVG00005015265	DOCK8 (ENSGEVG00005015343)	KANK1 (ENSGEVG00005015437)	DMRT1 (ENSGEVG00005015585)	DMRT3 (ENSGEVG00005015865) #7	DMRT2 (ENSGEVG00005015890) #8	SMARCA2 (ENSGEVG00005015950) #9	KCNV2 (ENSGEVG00005016696) #13	ENSGEVG00005016771 #14	ENSGEVG00005017017	RFX3 (ENSGEVG00005017166) #16	GLIS3 (ENSGEVG00005017217) #18	ENSGEVG00005017260	SLC1A1 (ENSGEVG00005017274) #19	SPATA6L (ENSGEVG00005017368) #20	CDC37L1 (ENSGEVG00005017405) #22	AK3 (ENSGEVG00005017423) #23	RCL1 (ENSGEVG00005017434) #24	JAK2 (ENSGEVG00005017459) #25	ENSGEVG00005017487 #30	PLGRKT (ENSGEVG00005017508) #31	CD274 (ENSGEVG00005017525) #33	PDCD1LG2 (ENSGEVG00005017549) #34	RIC1 (ENSGEVG00005017573) #35	ERMP1 (ENSGEVG00005017610) #36	MLANA (ENSGEVG00005017623) #37	FRMD3 (ENSGEVG00005017673)	IDNK (ENSGEVG00005017811)	UBQLN1 (ENSGEVG00005017836)	GKAP1 (ENSGEVG00005017882)	KIF27 (ENSGEVG00005017922)
Abingdon island giant tortoise	MODERN SPECIES	46															ENSCABG00000000071 #20	CDC37L1 (ENSCABG00000000093) #22	AK3 (ENSCABG00000000145) #23	RCL1 (ENSCABG00000000189) #24	JAK2 (ENSCABG00000000622) #25	ENSCABG00000004329 #30	PLGRKT (ENSCABG00000004330) #31	CD274 (ENSCABG00000004333) #33	PDCD1LG2 (ENSCABG00000004409) #34	RIC1 (ENSCABG00000004424) #35	ERMP1 (ENSCABG00000004749) #36	MLANA (ENSCABG00000004750) #37	FRMD3 (ENSCABG00000004752)
Emydidae	ANCESTRAL SPECIES	20	ENSGT00950000185504	ENSGT00940000154886.a.a	ENSGT00960000189645	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00940000164450	ENSGT00390000009531 #37	ENSGT00940000158577	ENSGT00390000003364	ENSGT00940000156437.i	ENSGT00390000008742
painted turtle	MODERN SPECIES	15	DOCK8 (ENSCPBG00000025439)	ENSCPBG00000025452	KANK1 (ENSCPBG00000025457)	DMRT1 (ENSCPBG00000025458)	DMRT3 (ENSCPBG00000025461) #7	DMRT2 (ENSCPBG00000025462) #8	SMARCA2 (ENSCPBG00000025463) #9	VLDLR (ENSCPBG00000025468) #12	KCNV2 (ENSCPBG00000025469) #13	PUM3 (ENSCPBG00000025470) #14	ENSCPBG00000025471	RFX3 (ENSCPBG00000025473) #16	GLIS3 (ENSCPBG00000025474) #18	SLC1A1 (ENSCPBG00000025475) #19	SPATA6L (ENSCPBG00000025478) #20	CDC37L1 (ENSCPBG00000025479) #22	AK3 (ENSCPBG00000025480) #23	RCL1 (ENSCPBG00000025481) #24	JAK2 (ENSCPBG00000025483) #25	ENSCPBG00000025484 #30	PLGRKT (ENSCPBG00000025485) #31	CD274 (ENSCPBG00000025486) #33	PDCD1LG2 (ENSCPBG00000025487) #34	RIC1 (ENSCPBG00000025489) #35	ERMP1 (ENSCPBG00000025490) #36	ENSCPBG00000025492	ENSCPBG00000025493 #37	FRMD3 (ENSCPBG00000025494)	IDNK (ENSCPBG00000025495)	UBQLN1 (ENSCPBG00000025496)	GKAP1 (ENSCPBG00000025497)
Three-toed box turtle	MODERN SPECIES	50	ENSTMTG00000015924	KANK1 (ENSTMTG00000015933)	ENSTMTG00000015959	DMRT1 (ENSTMTG00000015977)	DMRT3 (ENSTMTG00000015991) #7	DMRT2 (ENSTMTG00000016004) #8	SMARCA2 (ENSTMTG00000016037) #9	VLDLR (ENSTMTG00000016110) #12	KCNV2 (ENSTMTG00000016251) #13	PUM3 (ENSTMTG00000016264) #14	ENSTMTG00000016298	RFX3 (ENSTMTG00000016347) #16	GLIS3 (ENSTMTG00000016537) #18	SLC1A1 (ENSTMTG00000016551) #19	SPATA6L (ENSTMTG00000016584) #20	CDC37L1 (ENSTMTG00000016607) #22	AK3 (ENSTMTG00000016623) #23	RCL1 (ENSTMTG00000016634) #24	JAK2 (ENSTMTG00000016660) #25	ENSTMTG00000016706 #30	PLGRKT (ENSTMTG00000016710) #31	CD274 (ENSTMTG00000016745) #33	PDCD1LG2 (ENSTMTG00000016752) #34	RIC1 (ENSTMTG00000016776) #35	ERMP1 (ENSTMTG00000016873) #36	ENSTMTG00000016905	ENSTMTG00000016945 #37	FRMD3 (ENSTMTG00000016969)	IDNK (ENSTMTG00000017082)	UBQLN1 (ENSTMTG00000017089)	GKAP1 (ENSTMTG00000017106)
Chinese turtle	MODERN SPECIES	475													GLIS3 (ENSPSIG00000005966) #18	SLC1A1 (ENSPSIG00000007272) #19	ENSPSIG00000010075 #20	CDC37L1 (ENSPSIG00000010470) #22	AK3 (ENSPSIG00000011687) #23	RCL1 (ENSPSIG00000012302) #24	JAK2 (ENSPSIG00000012878) #25	PLGRKT (ENSPSIG00000015021) #31	CD274 (ENSPSIG00000015064) #33	RIC1 (ENSPSIG00000015494) #35	ERMP1 (ENSPSIG00000015685) #36	ENSPSIG00000017249	MLANA (ENSPSIG00000005246) #37	KIAA2026 (ENSPSIG00000005276)
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161430 #33	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D	ENSGT00940000155804
Laterata	ANCESTRAL SPECIES	7														ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D	ENSGT00940000155804
Common wall lizard	MODERN SPECIES	8	PTGR1 (ENSPMRG00000021759)	TXN (ENSPMRG00000021752)	TXNDC8 (ENSPMRG00000021737)	SVEP1 (ENSPMRG00000021582)	MUSK (ENSPMRG00000021520)	LPAR1 (ENSPMRG00000021509)	TMEM215 (ENSPMRG00000021506)	ENSPMRG00000021492	NDUFB6 (ENSPMRG00000021478)	TOPORS (ENSPMRG00000021472)	RIGI (ENSPMRG00000021389)	ACO1 (ENSPMRG00000021323)	SLC1A1 (ENSPMRG00000021278) #19	SPATA6L (ENSPMRG00000021247) #20	ENSPMRG00000021237	CDC37L1 (ENSPMRG00000021219) #22	AK3 (ENSPMRG00000021204) #23	RCL1 (ENSPMRG00000021189) #24	JAK2 (ENSPMRG00000020898) #25	ENSPMRG00000020840 #30	PLGRKT (ENSPMRG00000020836) #31	PDCD1LG2 (ENSPMRG00000020831) #34	RIC1 (ENSPMRG00000020809) #35	ERMP1 (ENSPMRG00000020796) #36	MLANA (ENSPMRG00000020786) #37	KIAA2026 (ENSPMRG00000020779)	UHRF2 (ENSPMRG00000020766)	GLDC (ENSPMRG00000020751)	KDM4C (ENSPMRG00000020731)	ENSPMRG00000020725	PTPRD (ENSPMRG00000020631)
Argentine black and white tegu	MODERN SPECIES	25														SLC1A1 (ENSSMRG00000012291) #19	SPATA6L (ENSSMRG00000012298) #20	CDC37L1 (ENSSMRG00000012299) #22	AK3 (ENSSMRG00000012300) #23	RCL1 (ENSSMRG00000012305) #24	JAK2 (ENSSMRG00000012306) #25	ENSSMRG00000012307 #30	PLGRKT (ENSSMRG00000012308) #31	PDCD1LG2 (ENSSMRG00000012319) #34	RIC1 (ENSSMRG00000012320) #35	ERMP1 (ENSSMRG00000012324) #36	MLANA (ENSSMRG00000012325) #37	KIAA2026 (ENSSMRG00000012326)	ENSSMRG00000012349	GLIS3 (ENSSMRG00000012362) #18	RFX3 (ENSSMRG00000012376) #16	ENSSMRG00000012379	PUM3 (ENSSMRG00000012380) #14
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D	ENSGT00940000155804
Elapidae	ANCESTRAL SPECIES	7	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00950000186013	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839.f #36	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930	ENSGT01010000229860	ENSGT00940000153617.D	ENSGT00940000155804	ENSGT00530000063790.b
Elapidae_a	ANCESTRAL SPECIES	101				ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839.f #36	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930.a	ENSGT01010000229860	ENSGT00940000153617.D	ENSGT00940000155804	ENSGT00530000063790.b
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00950000185125	ENSGT00940000155876.m	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839.f #36	ENSGT00390000011483	ENSGT00390000008296.b.a.a	ENSGT00390000017970	ENSGT00940000154930.a	ENSGT01010000229860	ENSGT00940000153617.D	ENSGT00940000155804	ENSGT00530000063790.b
Eastern brown snake	MODERN SPECIES	23	ENSPTXG00000018861	ENSPTXG00000018860	DOCK8 (ENSPTXG00000018810)	KANK1 (ENSPTXG00000018808)	DMRT1 (ENSPTXG00000018807)	DMRT3 (ENSPTXG00000018806) #7	DMRT2 (ENSPTXG00000018805) #8	SMARCA2 (ENSPTXG00000018801) #9	VLDLR (ENSPTXG00000018796) #12	KCNV2 (ENSPTXG00000018795) #13	PUM3 (ENSPTXG00000018794) #14	ENSPTXG00000018793	RFX3 (ENSPTXG00000018767) #16	GLIS3 (ENSPTXG00000018766) #18	SLC1A1 (ENSPTXG00000018764) #19	CDC37L1 (ENSPTXG00000018763) #22	AK3 (ENSPTXG00000018762) #23	RCL1 (ENSPTXG00000018760) #24	JAK2 (ENSPTXG00000018752) #25	PLGRKT (ENSPTXG00000018751) #31	PDCD1LG2 (ENSPTXG00000018750) #34	RIC1 (ENSPTXG00000018749) #35	ERMP1 (ENSPTXG00000018748) #36	KIAA2026 (ENSPTXG00000018747)	UHRF2 (ENSPTXG00000018746)	GLDC (ENSPTXG00000018745)	KDM4C (ENSPTXG00000018744)	PTPRD (ENSPTXG00000006046)
Mainland tiger snake	MODERN SPECIES	1	ENSNSUG00000018048	DOCK8 (ENSNSUG00000018049)	KANK1 (ENSNSUG00000018050)	DMRT1 (ENSNSUG00000018051)	DMRT3 (ENSNSUG00000018056) #7	DMRT2 (ENSNSUG00000018057) #8	SMARCA2 (ENSNSUG00000018108) #9	VLDLR (ENSNSUG00000019901) #12	KCNV2 (ENSNSUG00000019916) #13	PUM3 (ENSNSUG00000019917) #14	ENSNSUG00000019918	RFX3 (ENSNSUG00000019919) #16	GLIS3 (ENSNSUG00000019925) #18	SLC1A1 (ENSNSUG00000019926) #19	SPATA6L (ENSNSUG00000019928) #20	CDC37L1 (ENSNSUG00000019929) #22	AK3 (ENSNSUG00000019930) #23	ENSNSUG00000019931 #24	ENSNSUG00000019932 #24	JAK2 (ENSNSUG00000019934) #25	PLGRKT (ENSNSUG00000019935) #31	PDCD1LG2 (ENSNSUG00000019936) #34	RIC1 (ENSNSUG00000019937) #35	ENSNSUG00000019938 #36	ENSNSUG00000019939 #36	KIAA2026 (ENSNSUG00000019940)	UHRF2 (ENSNSUG00000019944)	GLDC (ENSNSUG00000019946)	KDM4C (ENSNSUG00000019947)	ENSNSUG00000020021	PTPRD (ENSNSUG00000020025)
Blue-lipped sea krait	MODERN SPECIES	4192													ENSLLTG00000012730	SLC1A1 (ENSLLTG00000012737) #19	SPATA6L (ENSLLTG00000012755) #20	CDC37L1 (ENSLLTG00000012778) #22	AK3 (ENSLLTG00000012784) #23
Indian cobra	MODERN SPECIES	1	ENSNNAG00000017470	KANK1 (ENSNNAG00000017462)	DMRT1 (ENSNNAG00000017439)	DMRT3 (ENSNNAG00000017425) #7	DMRT2 (ENSNNAG00000017421) #8	SMARCA2 (ENSNNAG00000016662) #9	VLDLR (ENSNNAG00000016101) #12	KCNV2 (ENSNNAG00000016029) #13	ENSNNAG00000015978 #14	ENSNNAG00000015953 #14	ENSNNAG00000015896	RFX3 (ENSNNAG00000015581) #16	GLIS3 (ENSNNAG00000015518) #18	ENSNNAG00000015513	SLC1A1 (ENSNNAG00000015451) #19	CDC37L1 (ENSNNAG00000015380) #22	AK3 (ENSNNAG00000015359) #23	RCL1 (ENSNNAG00000015339) #24	JAK2 (ENSNNAG00000015311) #25	PLGRKT (ENSNNAG00000015298) #31	PDCD1LG2 (ENSNNAG00000015251) #34	RIC1 (ENSNNAG00000015205) #35	ERMP1 (ENSNNAG00000014841) #36	KIAA2026 (ENSNNAG00000014777)	UHRF2 (ENSNNAG00000013890)	GLDC (ENSNNAG00000013176)	KDM4C (ENSNNAG00000013058)	ENSNNAG00000013031	PTPRD (ENSNNAG00000012603)	ENSNNAG00000012559	ENSNNAG00000012517
Lizard	MODERN SPECIES	1	DMRT1 (ENSACAG00000002356)	DMRT3 (ENSACAG00000002401) #7	DMRT2 (ENSACAG00000002411) #8	SMARCA2 (ENSACAG00000002423) #9	VLDLR (ENSACAG00000003015) #12	KCNV2 (ENSACAG00000003138) #13	PUM3 (ENSACAG00000003174) #14	ENSACAG00000003227	ENSACAG00000035469	RFX3 (ENSACAG00000003262) #16	GLIS3 (ENSACAG00000003374) #18	ENSACAG00000036408	SLC1A1 (ENSACAG00000003433) #19	ENSACAG00000043625	SPATA6L (ENSACAG00000029209) #20	CDC37L1 (ENSACAG00000003578) #22	AK3 (ENSACAG00000003605) #23	RCL1 (ENSACAG00000003640) #24	JAK2 (ENSACAG00000003673) #25	ENSACAG00000042874	ENSACAG00000024061 #30	PLGRKT (ENSACAG00000003966) #31	PDCD1LG2 (ENSACAG00000029075) #34	RIC1 (ENSACAG00000003988) #35	ERMP1 (ENSACAG00000004052) #36	MLANA (ENSACAG00000004131) #37	KIAA2026 (ENSACAG00000004132)	UHRF2 (ENSACAG00000004142)	ENSACAG00000044974	GLDC (ENSACAG00000004393)	ENSACAG00000041498
tuatara	MODERN SPECIES	1419															SLC1A1 (ENSSPUG00000016346) #19	CDC37L1 (ENSSPUG00000016341) #22	AK3 (ENSSPUG00000016335) #23	RCL1 (ENSSPUG00000016330) #24	JAK2 (ENSSPUG00000016313) #25	PLGRKT (ENSSPUG00000016305) #31	CD274 (ENSSPUG00000016298) #33	PDCD1LG2 (ENSSPUG00000016280) #34	RIC1 (ENSSPUG00000016199) #35	ERMP1 (ENSSPUG00000016138) #36	HIBADH (ENSSPUG00000016127)	ENSSPUG00000016102	HOXA11 (ENSSPUG00000016087)	ENSSPUG00000016084	HOXA9 (ENSSPUG00000016079)	HOXA7 (ENSSPUG00000016072)	HOXA6 (ENSSPUG00000016069)
Anura	ANCESTRAL SPECIES	29	ENSGT00640000091523	ENSGT00940000155876	ENSGT00940000154886.a.a	ENSGT00940000156489	ENSGT00940000160420 #7	ENSGT00940000156282.a.a #8	ENSGT00940000154821.b #9	ENSGT00940000155460 #12	ENSGT00940000157438 #13	ENSGT00390000015757 #14	ENSGT00940000164013	ENSGT01050000244879.a.a.b #16	ENSGT00940000156896 #18	ENSGT00940000155397.b #19	ENSGT00530000063821.b.b #20	ENSGT00390000013443.d #22	ENSGT00940000155120 #23	ENSGT00530000063404.a #24	ENSGT00940000155640 #25	ENSGT00940000154434 #30	ENSGT00390000000375 #31	ENSGT00940000161373 #34	ENSGT00390000002955 #35	ENSGT00530000063839 #36	ENSGT00390000009531 #37	ENSGT00390000011483	ENSGT00390000008296.b.b	ENSGT00390000017970	ENSGT00940000154930	ENSGT00940000153617.D	ENSGT00940000155804
Frog	MODERN SPECIES		dock8 (ENSXETG00000001648)	kank1 (ENSXETG00000002278)	dmrt1 (ENSXETG00000002277)	dmrt3 (ENSXETG00000015285) #7	dmrt2 (ENSXETG00000033983) #8	smarca2 (ENSXETG00000015299) #9	vldlr (ENSXETG00000011709) #12	kcnv2 (ENSXETG00000011708) #13	pum3 (ENSXETG00000011707) #14	carm1p1 (ENSXETG00000036672)	crygbl.2 (ENSXETG00000048659)	rfx3 (ENSXETG00000011698) #16	glis3 (ENSXETG00000011692) #18	slc1a1 (ENSXETG00000011685) #19	spata6l (ENSXETG00000030483) #20	cdc37l1 (ENSXETG00000000595) #22	ak3 (ENSXETG00000000588) #23	rcl1 (ENSXETG00000000592) #24	ENSXETG00000042090	jak2 (ENSXETG00000000586) #25	plgrkt (ENSXETG00000000587) #31	ENSXETG00000036720 #34	pdcd1lg2 (ENSXETG00000040791) #34	ric1 (ENSXETG00000000582) #35	ermp1 (ENSXETG00000000577) #36	mlana (ENSXETG00000037374) #37	fxn (ENSXETG00000039175)	kiaa2026 (ENSXETG00000000574)	uhrf2 (ENSXETG00000000567)	gldc (ENSXETG00000000543)	kdm4c (ENSXETG00000000532)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000000229	ENSLLEG00000000269	ENSLLEG00000000280	SMARCA2 (ENSLLEG00000000350) #9	ENSLLEG00000000580	VLDLR (ENSLLEG00000000597) #12	KCNV2 (ENSLLEG00000000652) #13	PUM3 (ENSLLEG00000000665) #14	RFX3 (ENSLLEG00000000718) #16	ENSLLEG00000000868	ENSLLEG00000000876	GLIS3 (ENSLLEG00000000897) #18	ENSLLEG00000000928	SLC1A1 (ENSLLEG00000001013) #19	SPATA6L (ENSLLEG00000001082) #20	CDC37L1 (ENSLLEG00000001174) #22	AK3 (ENSLLEG00000001204) #23	ENSLLEG00000001238	RCL1 (ENSLLEG00000001251) #24	ENSLLEG00000001296	JAK2 (ENSLLEG00000001323) #25	ENSLLEG00000001371 #30	PLGRKT (ENSLLEG00000001384) #31	ENSLLEG00000001414 #34	PDCD1LG2 (ENSLLEG00000001467) #34	ENSLLEG00000001500	RIC1 (ENSLLEG00000001526) #35	ERMP1 (ENSLLEG00000001621) #36	ENSLLEG00000001719	ENSLLEG00000001734	KIAA2026 (ENSLLEG00000001755)
Coelacanth	MODERN SPECIES	705											ENSLACG00000011838	GLIS3 (ENSLACG00000011383) #18	ENSLACG00000010250	SLC1A1 (ENSLACG00000007779) #19	SPATA6L (ENSLACG00000022591) #20	CDC37L1 (ENSLACG00000005200) #22	AK3 (ENSLACG00000004544) #23	si:dkey-3h3.3 (ENSLACG00000003908)