Actinopterygii ANCESTRAL SPECIES 720 ENSGT00390000011103.B #22 ENSGT00940000158847.d ENSGT00940000164891 Neopterygii ANCESTRAL SPECIES 568 ENSGT00390000011103.B #22 ENSGT00940000158847.d ENSGT00940000164891 Osteoglossocephalai ANCESTRAL SPECIES 13 ENSGT00940000154427.A #7 ENSGT00940000156110.c.a #8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01020000230338.a.b.b.b ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00550000074908 ENSGT00550000074954 ENSGT00940000159276 ENSGT00940000155693.b ##24 ENSGT00940000159745 ENSGT01030000234625.B.d.c ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 Clupeocephala ANCESTRAL SPECIES 17 ENSGT00940000154427.A #7 ENSGT00940000156110.c.a #8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01020000230338.a.b.b.b ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a #35 Euteleosteomorpha ANCESTRAL SPECIES 26 ENSGT00940000154427.A #7 ENSGT00940000156110.c.a #8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01020000230338.a.b.b.b.d ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a #35 Acanthomorphata ANCESTRAL SPECIES 7 ENSGT00940000156110.c.a #8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b #17 ENSGT00940000174567 #20 ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 Euacanthomorphacea ANCESTRAL SPECIES 11 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b #17 ENSGT00940000174567 #20 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 Percomorphaceae ANCESTRAL SPECIES 13 ENSGT00940000156110.c.a #8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT00940000174567 #20 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 Percomorphaceae_B ANCESTRAL SPECIES 11 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 Percomorphaceae_C ANCESTRAL SPECIES 12 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00970000197206 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 Anabantaria ANCESTRAL SPECIES 10 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00970000197206 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 Anabantoidei ANCESTRAL SPECIES 9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT00940000156145 #21 ENSGT00970000197206 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 Siamese fighting fish MODERN SPECIES 12 bbof1 (ENSBSLG00000025582) #7 aldh6a1 (ENSBSLG00000025453) #8 gstz1 (ENSBSLG00000025003) #9 tmed8 (ENSBSLG00000024977) #10 ATG2B (ENSBSLG00000024902) #11 gskip (ENSBSLG00000024891) #12 isca2 (ENSBSLG00000024881) #13 npc2.1 (ENSBSLG00000024862) #14 ENSBSLG00000024748 #15 ttc8 (ENSBSLG00000024681) #16 ENSBSLG00000024673 #17 ENSBSLG00000024646 #18 ENSBSLG00000024629 #19 ENSBSLG00000024625 #20 NEK9 (ENSBSLG00000024595) #21 ENSBSLG00000024567 #22 ENSBSLG00000024442 #23 JDP2 (ENSBSLG00000024411) #24 FLVCR2 (ENSBSLG00000024264) #25 ERG28 (ENSBSLG00000024257) #26 ENSBSLG00000024202 #27 tgfb3 (ENSBSLG00000024183) #28 IFT43 (ENSBSLG00000024176) #29 ENSBSLG00000024171 #30 ESRRB (ENSBSLG00000024105) #31 prox2 (ENSBSLG00000024093) #32 dlst (ENSBSLG00000024073) #33 RPS6KL1 (ENSBSLG00000024065) #34 ENSBSLG00000023997 #35 ENSBSLG00000023985 #36 ENSBSLG00000023983 #37 Climbing perch MODERN SPECIES 3 ENSATEG00000000615 #11 gskip (ENSATEG00000000818) #12 npc2.1 (ENSATEG00000025317) #14 isca2 (ENSATEG00000000858) #13 ENSATEG00000000968 #15 ENSATEG00000001185 #16 ENSATEG00000001153 #17 ENSATEG00000027730 ##17 ENSATEG00000001235 ##17 ENSATEG00000027230 ##17 ENSATEG00000001274 #18 ENSATEG00000001247 ##17 ENSATEG00000001315 #21 ENSATEG00000026844 ENSATEG00000001325 ACYP1 (ENSATEG00000025454) #22 ENSATEG00000001351 JDP2 (ENSATEG00000001383) #24 ENSATEG00000001397 ##25 FLVCR2 (ENSATEG00000001418) #25 ERG28 (ENSATEG00000001439) #26 ENSATEG00000001482 #27 tgfb3 (ENSATEG00000001502) #28 IFT43 (ENSATEG00000001549) #29 tgfb3 (ENSATEG00000006139) #28 GPATCH2L (ENSATEG00000001600) ESRRB (ENSATEG00000001610) #31 prox2 (ENSATEG00000001654) #32 dlst (ENSATEG00000001662) #33 RPS6KL1 (ENSATEG00000001668) #34 ENSATEG00000029867 #35 Zig-zag eel MODERN SPECIES 14 NOXRED1 (ENSMAMG00000004903) ENSMAMG00000004929 #11 gskip (ENSMAMG00000026129) #12 npc2.1 (ENSMAMG00000005085) #14 isca2 (ENSMAMG00000005486) #13 ENSMAMG00000005497 #15 ENSMAMG00000005570 #16 ENSMAMG00000005642 #17 ENSMAMG00000026483 ##17 ENSMAMG00000005684 ##17 ENSMAMG00000028014 #20 ENSMAMG00000005693 #18 ENSMAMG00000005703 #18 ENSMAMG00000005739 ##17 ENSMAMG00000005772 #21 ACYP1 (ENSMAMG00000025112) #22 ENSMAMG00000005799 ENSMAMG00000005809 #23 JDP2 (ENSMAMG00000005831) #24 FLVCR2 (ENSMAMG00000005852) ##25 ENSMAMG00000027957 #25 ERG28 (ENSMAMG00000027458) #26 ENSMAMG00000005926 #27 tgfb3 (ENSMAMG00000005975) #28 IFT43 (ENSMAMG00000005983) #29 GPATCH2L (ENSMAMG00000005997) ESRRB (ENSMAMG00000006014) #31 prox2 (ENSMAMG00000006036) #32 dlst (ENSMAMG00000025145) #33 RPS6KL1 (ENSMAMG00000006095) #34 ENSMAMG00000006115 #35 Carangaria ANCESTRAL SPECIES 10 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00970000197206 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 Pleuronectoidei ANCESTRAL SPECIES 5 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 Tongue sole MODERN SPECIES ENSCSEG00000000689 #37 OLFM4 (ENSCSEG00000000680) #36 RPS6KL1 (ENSCSEG00000000673) #34 dlst (ENSCSEG00000000659) #33 prox2 (ENSCSEG00000000653) #32 ESRRB (ENSCSEG00000000639) #31 GPATCH2L (ENSCSEG00000000629) IFT43 (ENSCSEG00000000620) #29 tgfb3 (ENSCSEG00000000606) #28 EML5 (ENSCSEG00000000603) #15 ttc8 (ENSCSEG00000000589) #16 ENSCSEG00000000602 #17 ENSCSEG00000000586 #20 ENSCSEG00000000582 ##17 NEK9 (ENSCSEG00000000555) #21 ENSCSEG00000000548 #22 ENSCSEG00000000543 ENSCSEG00000000541 #23 JDP2 (ENSCSEG00000000539) #24 FLVCR2 (ENSCSEG00000000535) #25 ERG28 (ENSCSEG00000000527) #26 ENSCSEG00000000524 #27 ENSCSEG00000000518 ENSCSEG00000000517 #15 ENSCSEG00000000470 #15 isca2 (ENSCSEG00000000464) #13 npc2.1 (ENSCSEG00000000425) #14 gskip (ENSCSEG00000000416) #12 ATG2B (ENSCSEG00000000401) #11 tmed8 (ENSCSEG00000000389) #10 zgc:163014 (ENSCSEG00000000383) Turbot MODERN SPECIES 8 zgc:163014 (ENSSMAG00000003977) tmed8 (ENSSMAG00000003995) #10 NOXRED1 (ENSSMAG00000004004) ENSSMAG00000004020 #11 gskip (ENSSMAG00000004108) #12 npc2.1 (ENSSMAG00000004121) #14 isca2 (ENSSMAG00000004340) #13 ENSSMAG00000004349 #15 ENSSMAG00000004472 #16 ENSSMAG00000034211 #17 ENSSMAG00000004547 ##17 ENSSMAG00000030338 ##17 ENSSMAG00000026527 #18 ENSSMAG00000026437 ##17 ENSSMAG00000004624 #21 ENSSMAG00000025652 #22 ENSSMAG00000004726 ENSSMAG00000004752 #23 JDP2 (ENSSMAG00000004762) #24 ENSSMAG00000032870 ##25 FLVCR2 (ENSSMAG00000004773) #25 ERG28 (ENSSMAG00000031469) #26 ENSSMAG00000004813 #27 tgfb3 (ENSSMAG00000004837) #28 IFT43 (ENSSMAG00000004865) #29 GPATCH2L (ENSSMAG00000004907) ESRRB (ENSSMAG00000004937) #31 prox2 (ENSSMAG00000004975) #32 dlst (ENSSMAG00000004993) #33 RPS6KL1 (ENSSMAG00000024937) #34 LRRC74A (ENSSMAG00000005061) Carangaria_A ANCESTRAL SPECIES 4 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00970000197206 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 ENSGT00940000155454.w.a.a #36 Seriola ANCESTRAL SPECIES 3 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.i #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.j #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 ENSGT00940000155454.w.a.a #36 Yellowtail amberjack MODERN SPECIES 2965 zgc:163014 (ENSSLDG00000020292) tmed8 (ENSSLDG00000020311) #10 NOXRED1 (ENSSLDG00000020324) ATG2B (ENSSLDG00000020346) #11 gskip (ENSSLDG00000020492) #12 npc2.1 (ENSSLDG00000020547) #14 isca2 (ENSSLDG00000020710) #13 EML5 (ENSSLDG00000020733) #15 ttc8 (ENSSLDG00000020875) #16 ENSSLDG00000020949 #17 ENSSLDG00000020965 ##17 ENSSLDG00000020974 ##17 ENSSLDG00000020985 #18 ENSSLDG00000021010 ##17 NEK9 (ENSSLDG00000021020) #21 ENSSLDG00000021055 #22 ENSSLDG00000021066 ENSSLDG00000021099 #23 JDP2 (ENSSLDG00000021117) #24 FLVCR2 (ENSSLDG00000021129) #25 ERG28 (ENSSLDG00000021171) #26 ENSSLDG00000021195 #27 tgfb3 (ENSSLDG00000021239) #28 IFT43 (ENSSLDG00000021252) #29 GPATCH2L (ENSSLDG00000021264) ESRRB (ENSSLDG00000021283) #31 prox2 (ENSSLDG00000021320) #32 dlst (ENSSLDG00000021344) #33 RPS6KL1 (ENSSLDG00000021428) #34 ENSSLDG00000021445 #35 OLFM4 (ENSSLDG00000021454) #36 Greater amberjack MODERN SPECIES 62 tmed8 (ENSSDUG00000002850) #10 NOXRED1 (ENSSDUG00000002862) ATG2B (ENSSDUG00000002905) #11 npc2.1 (ENSSDUG00000003084) #14 gskip (ENSSDUG00000003108) #12 isca2 (ENSSDUG00000003113) #13 EML5 (ENSSDUG00000003133) #15 ttc8 (ENSSDUG00000003280) #16 ENSSDUG00000003343 #17 ENSSDUG00000003365 ##17 ENSSDUG00000003378 ##17 ENSSDUG00000003387 #18 ENSSDUG00000003403 #18 ENSSDUG00000003431 ##17 NEK9 (ENSSDUG00000003442) #21 ENSSDUG00000003471 #22 ENSSDUG00000003495 ENSSDUG00000003517 ENSSDUG00000003536 #23 JDP2 (ENSSDUG00000003556) #24 FLVCR2 (ENSSDUG00000003576) #25 ERG28 (ENSSDUG00000003602) #26 ENSSDUG00000003617 #27 tgfb3 (ENSSDUG00000003655) #28 IFT43 (ENSSDUG00000003660) #29 GPATCH2L (ENSSDUG00000003664) ESRRB (ENSSDUG00000003682) #31 prox2 (ENSSDUG00000003704) #32 dlst (ENSSDUG00000003729) #33 RPS6KL1 (ENSSDUG00000003829) #34 ENSSDUG00000003867 #35 Barramundi perch MODERN SPECIES 110 zgc:163014 (ENSLCAG00010020450) tmed8 (ENSLCAG00010020440) #10 NOXRED1 (ENSLCAG00010020432) ATG2B (ENSLCAG00010020189) #11 gskip (ENSLCAG00010020154) #12 npc2.1 (ENSLCAG00010020153) #14 isca2 (ENSLCAG00010020151) #13 EML5 (ENSLCAG00010020149) #15 ttc8 (ENSLCAG00010020110) #16 ENSLCAG00010020089 #17 ENSLCAG00010020083 ##17 ENSLCAG00010020079 #18 ENSLCAG00010020076 #18 NEK9 (ENSLCAG00010020050) #21 ENSLCAG00010020031 ENSLCAG00010020028 #22 ENSLCAG00010019998 ENSLCAG00010019980 #23 JDP2 (ENSLCAG00010019974) #24 FLVCR2 (ENSLCAG00010019962) #25 ERG28 (ENSLCAG00010019950) #26 ENSLCAG00010019793 #27 tgfb3 (ENSLCAG00010019758) #28 IFT43 (ENSLCAG00010019754) #29 GPATCH2L (ENSLCAG00010019744) ESRRB (ENSLCAG00010019726) #31 prox2 (ENSLCAG00010019720) #32 dlst (ENSLCAG00010019684) #33 RPS6KL1 (ENSLCAG00010019672) #34 ENSLCAG00010019662 #37 LRRC74A (ENSLCAG00010019651) Eupercaria ANCESTRAL SPECIES 9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 Tetraodontidae ANCESTRAL SPECIES 3 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.d.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 ENSGT00940000155454.w.b #37 Fugu MODERN SPECIES 11 bbof1 (ENSTRUG00000018223) #7 aldh6a1 (ENSTRUG00000018226) #8 gstz1 (ENSTRUG00000032191) #9 zgc:163014 (ENSTRUG00000019659) tmed8 (ENSTRUG00000018236) #10 ATG2B (ENSTRUG00000018239) #11 gskip (ENSTRUG00000018266) #12 npc2.1 (ENSTRUG00000018269) #14 isca2 (ENSTRUG00000028337) #13 ttc8 (ENSTRUG00000018291) #16 ENSTRUG00000018294 #17 ENSTRUG00000023246 ##17 ENSTRUG00000032404 ##17 ENSTRUG00000026423 #18 NEK9 (ENSTRUG00000018297) #21 ENSTRUG00000025329 #22 ENSTRUG00000018306 TMED10 (ENSTRUG00000018311) ENSTRUG00000018314 #23 JDP2 (ENSTRUG00000029600) #24 FLVCR2 (ENSTRUG00000018328) ##25 ERG28 (ENSTRUG00000032681) #26 ENSTRUG00000018337 #27 tgfb3 (ENSTRUG00000023926) #28 IFT43 (ENSTRUG00000018345) #29 GPATCH2L (ENSTRUG00000018346) ESRRB (ENSTRUG00000018347) #31 prox2 (ENSTRUG00000023052) #32 dlst (ENSTRUG00000018357) #33 RPS6KL1 (ENSTRUG00000015530) #34 ENSTRUG00000015523 #35 Tetraodon MODERN SPECIES 1 ENTPD5 (ENSTNIG00000017389) bbof1 (ENSTNIG00000017390) #7 aldh6a1 (ENSTNIG00000017391) #8 gstz1 (ENSTNIG00000017392) #9 zgc:163014 (ENSTNIG00000017393) tmed8 (ENSTNIG00000017394) #10 ATG2B (ENSTNIG00000017395) #11 ENSTNIG00000017396 #11 gskip (ENSTNIG00000017397) #12 npc2.1 (ENSTNIG00000017398) #14 isca2 (ENSTNIG00000017399) #13 EML5 (ENSTNIG00000017400) #15 ENSTNIG00000000369 ENSTNIG00000017401 ##17 NEK9 (ENSTNIG00000017402) #21 ENSTNIG00000017403 #22 ENSTNIG00000017404 ENSTNIG00000017405 #23 JDP2 (ENSTNIG00000017406) #24 FLVCR2 (ENSTNIG00000017407) ##25 ERG28 (ENSTNIG00000017408) #26 ENSTNIG00000017409 #27 tgfb3 (ENSTNIG00000017410) #28 IFT43 (ENSTNIG00000017411) #29 GPATCH2L (ENSTNIG00000017412) ESRRB (ENSTNIG00000017413) #31 dlst (ENSTNIG00000017415) #33 prox2 (ENSTNIG00000017414) #32 dlst (ENSTNIG00000017416) #33 RPS6KL1 (ENSTNIG00000017417) #34 ENSTNIG00000017418 #35 Eupecaria_A ANCESTRAL SPECIES 10 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 Ballan wrasse MODERN SPECIES 29 gstz1 (ENSLBEG00000001373) #9 zgc:163014 (ENSLBEG00000001345) tmed8 (ENSLBEG00000001312) #10 NOXRED1 (ENSLBEG00000001306) ATG2B (ENSLBEG00000001237) #11 ENSLBEG00000001213 #11 gskip (ENSLBEG00000001173) #12 npc2.1 (ENSLBEG00000001160) #14 isca2 (ENSLBEG00000001106) #13 EML5 (ENSLBEG00000000868) #15 ttc8 (ENSLBEG00000000763) #16 ENSLBEG00000000754 #17 ENSLBEG00000000747 ##17 ENSLBEG00000000741 ##17 NEK9 (ENSLBEG00000000718) #21 ENSLBEG00000000708 #22 ENSLBEG00000000695 ENSLBEG00000000673 #23 JDP2 (ENSLBEG00000000660) #24 ENSLBEG00000000640 #25 FLVCR2 (ENSLBEG00000000549) ##25 ERG28 (ENSLBEG00000000516) #26 ENSLBEG00000000473 #27 tgfb3 (ENSLBEG00000000436) #28 IFT43 (ENSLBEG00000000378) #29 GPATCH2L (ENSLBEG00000000361) ESRRB (ENSLBEG00000000330) #31 prox2 (ENSLBEG00000000305) #32 dlst (ENSLBEG00000000267) #33 RPS6KL1 (ENSLBEG00000000250) #34 ENSLBEG00000000245 #36 Eupecaria_B ANCESTRAL SPECIES 11 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 Perciformes ANCESTRAL SPECIES 12 ENSGT00940000156110.c.a #8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT00940000174567 #20 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 Cottioidei ANCESTRAL SPECIES 8 ENSGT00940000154427.A #7 ENSGT00940000156110.c.a #8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 Lumpfish MODERN SPECIES 14 coq6 (ENSCLMG00005015794) ENTPD5 (ENSCLMG00005015790) ENSCLMG00005015789 aldh6a1 (ENSCLMG00005015788) #8 gstz1 (ENSCLMG00005015751) #9 zgc:163014 (ENSCLMG00005015746) tmed8 (ENSCLMG00005015743) #10 NOXRED1 (ENSCLMG00005015741) ATG2B (ENSCLMG00005015730) #11 gskip (ENSCLMG00005015720) #12 npc2.1 (ENSCLMG00005015719) #14 isca2 (ENSCLMG00005015717) #13 ttc8 (ENSCLMG00005015714) #16 ENSCLMG00005015711 #17 NEK9 (ENSCLMG00005015709) #21 ENSCLMG00005015702 #22 ENSCLMG00005015701 ENSCLMG00005015699 ENSCLMG00005015697 ENSCLMG00005015619 #23 JDP2 (ENSCLMG00005015616) #24 FLVCR2 (ENSCLMG00005015510) #25 ERG28 (ENSCLMG00005015509) #26 ENSCLMG00005015507 #27 ENSCLMG00005015505 tgfb3 (ENSCLMG00005015502) #28 IFT43 (ENSCLMG00005015500) #29 GPATCH2L (ENSCLMG00005015496) ESRRB (ENSCLMG00005015485) #31 prox2 (ENSCLMG00005015484) #32 dlst (ENSCLMG00005015474) #33 Perciformes_a ANCESTRAL SPECIES 10 ENSGT00940000156110.c.a #8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT00940000174567 #20 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 ENSGT00940000155454.w.b #37 Channel bull blenny MODERN SPECIES 14 tmed8 (ENSCGOG00000016344) #10 NOXRED1 (ENSCGOG00000013560) gskip (ENSCGOG00000013661) #12 npc2.1 (ENSCGOG00000013663) #14 isca2 (ENSCGOG00000013669) #13 EML5 (ENSCGOG00000013694) #15 ttc8 (ENSCGOG00000014174) #16 ENSCGOG00000014670 #17 ENSCGOG00000014671 #20 ENSCGOG00000014672 ##17 ENSCGOG00000014674 ENSCGOG00000014676 #18 NEK9 (ENSCGOG00000014695) #21 ENSCGOG00000015174 #18 ENSCGOG00000015177 #18 ENSCGOG00000015179 #22 ENSCGOG00000015182 ENSCGOG00000015200 ENSCGOG00000015204 #23 JDP2 (ENSCGOG00000015205) #24 FLVCR2 (ENSCGOG00000015208) #25 ERG28 (ENSCGOG00000015304) #26 ENSCGOG00000015308 #27 tgfb3 (ENSCGOG00000015422) #28 IFT43 (ENSCGOG00000015428) #29 GPATCH2L (ENSCGOG00000015440) ENSCGOG00000015443 ESRRB (ENSCGOG00000015447) #31 prox2 (ENSCGOG00000015475) #32 dlst (ENSCGOG00000015478) #33 RPS6KL1 (ENSCGOG00000015734) #34 Pike perch MODERN SPECIES 5 ENTPD5 (ENSSLUG00000009327) bbof1 (ENSSLUG00000009317) #7 aldh6a1 (ENSSLUG00000008832) #8 gstz1 (ENSSLUG00000008752) #9 zgc:163014 (ENSSLUG00000008741) ENSSLUG00000008737 ATG2B (ENSSLUG00000008502) #11 gskip (ENSSLUG00000008474) #12 npc2.1 (ENSSLUG00000008460) #14 isca2 (ENSSLUG00000008453) #13 EML5 (ENSSLUG00000008424) #15 ttc8 (ENSSLUG00000007907) #16 ENSSLUG00000007868 #17 ENSSLUG00000007860 #20 NEK9 (ENSSLUG00000007818) #21 ENSSLUG00000007803 #22 ENSSLUG00000007796 ENSSLUG00000007777 ENSSLUG00000007754 ENSSLUG00000007737 #23 JDP2 (ENSSLUG00000007731) #24 FLVCR2 (ENSSLUG00000007709) ##25 ERG28 (ENSSLUG00000007698) #26 ENSSLUG00000007653 #27 tgfb3 (ENSSLUG00000007633) #28 IFT43 (ENSSLUG00000007621) #29 ENSSLUG00000007616 GPATCH2L (ENSSLUG00000007608) ESRRB (ENSSLUG00000007571) #31 prox2 (ENSSLUG00000007548) #32 dlst (ENSSLUG00000006732) #33 Eupecaria_C ANCESTRAL SPECIES 8 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 Eupercaria_incertae_sedis ANCESTRAL SPECIES 16 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 ENSGT00940000155454.w.a.a #36 Large yellow croaker MODERN SPECIES 495 aldh6a1 (ENSLCRG00005017273) #8 gstz1 (ENSLCRG00005017343) #9 zgc:163014 (ENSLCRG00005017345) tmed8 (ENSLCRG00005017347) #10 ATG2B (ENSLCRG00005017352) #11 gskip (ENSLCRG00005017360) #12 npc2.1 (ENSLCRG00005017361) #14 isca2 (ENSLCRG00005017363) #13 EML5 (ENSLCRG00005017364) #15 ttc8 (ENSLCRG00005017368) #16 ENSLCRG00005017370 ##17 ENSLCRG00005017371 ##17 ENSLCRG00005017374 #18 ENSLCRG00005017375 ##17 NEK9 (ENSLCRG00005017376) #21 ENSLCRG00005017377 #22 MLH3 (ENSLCRG00005017378) ENSLCRG00005017379 #23 JDP2 (ENSLCRG00005017390) #24 FLVCR2 (ENSLCRG00005017394) #25 ERG28 (ENSLCRG00005017404) #26 ENSLCRG00005017425 #27 tgfb3 (ENSLCRG00005017482) #28 IFT43 (ENSLCRG00005017486) #29 GPATCH2L (ENSLCRG00005017489) esrrb (ENSLCRG00005017492) #31 prox2 (ENSLCRG00005017493) #32 dlst (ENSLCRG00005017494) #33 RPS6KL1 (ENSLCRG00005017499) #34 ENSLCRG00005017501 #35 ENSLCRG00005017502 #36 European seabass MODERN SPECIES 2 ENTPD5 (ENSDLAG00005011835) BBOF1 (ENSDLAG00005011826) #7 aldh6a1 (ENSDLAG00005011476) #8 gstz1 (ENSDLAG00005033795) #9 zgc:163014 (ENSDLAG00005033476) tmed8 (ENSDLAG00005010779) #10 NOXRED1 (ENSDLAG00005010764) ENSDLAG00005010692 #11 ENSDLAG00005030109 #13 ENSDLAG00005009980 #15 ENSDLAG00005027218 #16 ENSDLAG00005009750 #17 ENSDLAG00005026725 #18 ENSDLAG00005009693 ##17 ENSDLAG00005009493 #21 ENSDLAG00005009475 #22 ENSDLAG00005009467 ENSDLAG00005009432 #23 JDP2 (ENSDLAG00005031903) #24 FLVCR2 (ENSDLAG00005009385) #25 ERG28 (ENSDLAG00005034440) #26 ENSDLAG00005009162 #27 tgfb3 (ENSDLAG00005028845) #28 IFT43 (ENSDLAG00005009135) #29 GPATCH2L (ENSDLAG00005009129) ESRRB (ENSDLAG00005009106) #31 prox2 (ENSDLAG00005009097) #32 dlst (ENSDLAG00005008982) #33 RPS6KL1 (ENSDLAG00005008969) #34 ENSDLAG00005008961 #35 ENSDLAG00005008957 #36 Gilthead seabream MODERN SPECIES 7 ATG2B (ENSSAUG00010005053) #11 gskip (ENSSAUG00010005050) #12 npc2.1 (ENSSAUG00010005049) #14 isca2 (ENSSAUG00010005048) #13 EML5 (ENSSAUG00010004876) #15 ttc8 (ENSSAUG00010004793) #16 ENSSAUG00010004788 #17 ENSSAUG00010004786 ##17 ENSSAUG00010004784 ##17 ENSSAUG00010004781 #18 ENSSAUG00010004776 #18 ENSSAUG00010004773 #18 ENSSAUG00010004771 ##17 NEK9 (ENSSAUG00010004754) #21 ENSSAUG00010004744 ENSSAUG00010004741 #22 ENSSAUG00010004735 ENSSAUG00010004732 ENSSAUG00010004727 #23 JDP2 (ENSSAUG00010004723) #24 FLVCR2 (ENSSAUG00010004003) ##25 ERG28 (ENSSAUG00010003977) #26 ENSSAUG00010003969 #27 ENSSAUG00010003967 tgfb3 (ENSSAUG00010003964) #28 IFT43 (ENSSAUG00010003957) #29 GPATCH2L (ENSSAUG00010003952) ESRRB (ENSSAUG00010003939) #31 prox2 (ENSSAUG00010003934) #32 dlst (ENSSAUG00010003627) #33 RPS6KL1 (ENSSAUG00010003609) #34 Ovalentaria ANCESTRAL SPECIES 10 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 Ovalentaria_B ANCESTRAL SPECIES 18 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 Cichlidae ANCESTRAL SPECIES 22 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613.h #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT00940000174567 #20 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613.h #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT00940000174567 #20 ENSGT00990000208419.a ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.a #18 ENSGT01030000234575.c.a.a.a.a.b.b.b.d.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b.d.a ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.d #18 ENSGT01030000234575.c.a.a.a.a.b.b.b.c.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.b #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613.h #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT00940000174567 #20 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.a #18 ENSGT01030000234575.c.a.a.a.a.b.b.b.d.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b.d.a ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.d #18 ENSGT01030000234575.c.a.a.a.a.b.b.b.c.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.b #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 Haplochromini ANCESTRAL SPECIES 7 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613.h #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.a #18 ENSGT01030000234575.c.a.a.a.a.b.b.b.d.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.d #18 ENSGT01030000234575.c.a.a.a.a.b.b.b.c.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.b #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 Burton s mouthbrooder MODERN SPECIES 285 tmed8 (ENSHBUG00000019613) #10 NOXRED1 (ENSHBUG00000019593) ATG2B (ENSHBUG00000019549) #11 gskip (ENSHBUG00000019220) #12 npc2.1 (ENSHBUG00000019206) #14 isca2 (ENSHBUG00000019196) #13 EML5 (ENSHBUG00000019180) #15 ttc8 (ENSHBUG00000019056) #16 ENSHBUG00000018964 #17 ENSHBUG00000018947 ##17 ENSHBUG00000018926 #18 ENSHBUG00000018906 ##17 ENSHBUG00000018894 ##17 ENSHBUG00000018865 #18 NEK9 (ENSHBUG00000018851) #21 ENSHBUG00000018771 #22 MLH3 (ENSHBUG00000018766) ENSHBUG00000018749 #23 JDP2 (ENSHBUG00000018738) #24 FLVCR2 (ENSHBUG00000018722) #25 ERG28 (ENSHBUG00000018687) #26 ENSHBUG00000018667 #27 tgfb3 (ENSHBUG00000018621) #28 IFT43 (ENSHBUG00000018591) #29 GPATCH2L (ENSHBUG00000018530) ESRRB (ENSHBUG00000018505) #31 prox2 (ENSHBUG00000018457) #32 dlst (ENSHBUG00000018444) #33 RPS6KL1 (ENSHBUG00000018411) #34 ENSHBUG00000000936 #37 LRRC74A (ENSHBUG00000018359) Haplochromini_A ANCESTRAL SPECIES 7 ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613.h #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT00940000174567 #20 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.a #18 ENSGT01030000234575.c.a.a.a.a.b.b.b.d.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.d #18 ENSGT01030000234575.c.a.a.a.a.b.b.b.c.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.b #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 Haplochromini_B ANCESTRAL SPECIES 13 ENSGT00940000175915 ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613.h #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.a #18 ENSGT01030000234575.c.a.a.a.a.b.b.b.d.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.d #18 ENSGT01030000234575.c.a.a.a.a.b.b.b.c.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.c.b #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 Eastern happy MODERN SPECIES 10 tmed8 (ENSACLG00000023624) #10 ATG2B (ENSACLG00000023637) #11 gskip (ENSACLG00000023830) #12 npc2.1 (ENSACLG00000023844) #14 isca2 (ENSACLG00000023953) #13 EML5 (ENSACLG00000023969) #15 ttc8 (ENSACLG00000024073) #16 ENSACLG00000024117 #17 ENSACLG00000024128 ##17 ENSACLG00000024140 #18 ENSACLG00000024144 ##17 ENSACLG00000024146 #18 ENSACLG00000024153 ##17 ENSACLG00000024344 #18 NEK9 (ENSACLG00000024366) #21 ENSACLG00000024424 #22 MLH3 (ENSACLG00000024432) ENSACLG00000024472 #23 JDP2 (ENSACLG00000024478) #24 FLVCR2 (ENSACLG00000024486) ##25 ERG28 (ENSACLG00000024499) #26 ENSACLG00000024531 #27 ENSACLG00000024537 #27 tgfb3 (ENSACLG00000024559) #28 IFT43 (ENSACLG00000024588) #29 GPATCH2L (ENSACLG00000024682) ESRRB (ENSACLG00000024711) #31 prox2 (ENSACLG00000024761) #32 dlst (ENSACLG00000024780) #33 RPS6KL1 (ENSACLG00000024821) #34 ENSACLG00000024844 #36 Zebra mbuna MODERN SPECIES 11 tmed8 (ENSMZEG00005020739) #10 ENSMZEG00005020743 ATG2B (ENSMZEG00005020754) #11 gskip (ENSMZEG00005020767) #12 npc2.1 (ENSMZEG00005020770) #14 isca2 (ENSMZEG00005020772) #13 EML5 (ENSMZEG00005020778) #15 ttc8 (ENSMZEG00005020788) #16 ENSMZEG00005020797 #17 ENSMZEG00005020800 ##17 ENSMZEG00005020803 #18 ENSMZEG00005020806 ##17 ENSMZEG00005020810 ##17 ENSMZEG00005020813 #18 NEK9 (ENSMZEG00005020817) #21 ENSMZEG00005020826 #22 MLH3 (ENSMZEG00005020828) ENSMZEG00005020833 #23 JDP2 (ENSMZEG00005020836) #24 FLVCR2 (ENSMZEG00005020841) ##25 ENSMZEG00005020846 ERG28 (ENSMZEG00005020851) #26 ENSMZEG00005020854 #27 ENSMZEG00005020858 tgfb3 (ENSMZEG00005020864) #28 IFT43 (ENSMZEG00005020870) #29 GPATCH2L (ENSMZEG00005020876) ESRRB (ENSMZEG00005020880) #31 prox2 (ENSMZEG00005020890) #32 dlst (ENSMZEG00005020939) #33 RPS6KL1 (ENSMZEG00005020941) #34 P. nyererei MODERN SPECIES 418 ENSPNYG00000021367 ##17 ENSPNYG00000021385 #18 NEK9 (ENSPNYG00000021405) #21 ENSPNYG00000021426 #22 ENSPNYG00000021432 ENSPNYG00000021445 ENSPNYG00000021461 #23 JDP2 (ENSPNYG00000021474) #24 FLVCR2 (ENSPNYG00000021487) #25 ERG28 (ENSPNYG00000021518) #26 ENSPNYG00000021526 #27 ENSPNYG00000021536 tgfb3 (ENSPNYG00000021547) #28 IFT43 (ENSPNYG00000021561) #29 GPATCH2L (ENSPNYG00000021578) ESRRB (ENSPNYG00000021595) #31 prox2 (ENSPNYG00000021606) #32 dlst (ENSPNYG00000021627) #33 RPS6KL1 (ENSPNYG00000021655) #34 Lyretail cichlid MODERN SPECIES 299 gskip (ENSNBRG00000004640) #12 npc2.1 (ENSNBRG00000004628) #14 isca2 (ENSNBRG00000004609) #13 EML5 (ENSNBRG00000004484) #15 ttc8 (ENSNBRG00000004443) #16 ENSNBRG00000004432 #17 ENSNBRG00000004420 ##17 ENSNBRG00000004402 ENSNBRG00000004394 ENSNBRG00000004378 ##17 ENSNBRG00000004355 ##17 ENSNBRG00000004315 #18 ENSNBRG00000004293 ENSNBRG00000004273 ##17 NEK9 (ENSNBRG00000004206) #21 ENSNBRG00000004194 #22 ENSNBRG00000004184 MLH3 (ENSNBRG00000004159) ENSNBRG00000004137 #23 JDP2 (ENSNBRG00000004110) #24 ENSNBRG00000004097 ##25 FLVCR2 (ENSNBRG00000004058) #25 ERG28 (ENSNBRG00000004037) #26 ENSNBRG00000004022 #27 ENSNBRG00000004002 #27 ENSNBRG00000003977 tgfb3 (ENSNBRG00000003946) #28 IFT43 (ENSNBRG00000003925) #29 GPATCH2L (ENSNBRG00000003911) ESRRB (ENSNBRG00000003887) #31 prox2 (ENSNBRG00000003860) #32 Nile tilapia MODERN SPECIES 10 EML5 (ENSONIG00000020175) #15 ttc8 (ENSONIG00000020176) #16 ENSONIG00000020177 ##17 ENSONIG00000040387 ##17 ENSONIG00000028507 #18 ENSONIG00000043196 ENSONIG00000020181 #18 ENSONIG00000020179 ##17 ENSONIG00000020180 ##17 ENSONIG00000040533 ##17 ENSONIG00000034205 #18 ENSONIG00000035684 ##17 ENSONIG00000034187 #18 ENSONIG00000033262 NEK9 (ENSONIG00000020182) #21 ENSONIG00000020183 #22 MLH3 (ENSONIG00000020184) ENSONIG00000020185 #23 JDP2 (ENSONIG00000020186) #24 FLVCR2 (ENSONIG00000020187) #25 ERG28 (ENSONIG00000020188) #26 ENSONIG00000020189 #27 tgfb3 (ENSONIG00000020190) #28 IFT43 (ENSONIG00000037253) #29 GPATCH2L (ENSONIG00000020191) ESRRB (ENSONIG00000020192) #31 prox2 (ENSONIG00000020193) #32 dlst (ENSONIG00000020194) #33 RPS6KL1 (ENSONIG00000020195) #34 ENSONIG00000020196 #36 ENSONIG00000020197 #37 Midas cichlid MODERN SPECIES 150 zgc:163014 (ENSACIG00000007365) tmed8 (ENSACIG00000007383) #10 ATG2B (ENSACIG00000007406) #11 gskip (ENSACIG00000007520) #12 npc2.1 (ENSACIG00000007526) #14 isca2 (ENSACIG00000007660) #13 EML5 (ENSACIG00000007683) #15 ttc8 (ENSACIG00000007783) #16 ENSACIG00000007814 #17 ENSACIG00000007829 #20 ENSACIG00000007841 ##17 ENSACIG00000007862 ENSACIG00000007883 ##17 ENSACIG00000007938 ##17 NEK9 (ENSACIG00000007963) #21 ENSACIG00000008009 #22 ENSACIG00000008029 ENSACIG00000008052 #23 JDP2 (ENSACIG00000008079) #24 ENSACIG00000008112 #25 FLVCR2 (ENSACIG00000008129) ##25 ERG28 (ENSACIG00000008170) #26 ENSACIG00000008186 #27 ENSACIG00000008200 tgfb3 (ENSACIG00000008212) #28 IFT43 (ENSACIG00000008236) #29 GPATCH2L (ENSACIG00000008257) ESRRB (ENSACIG00000008268) #31 prox2 (ENSACIG00000008285) #32 dlst (ENSACIG00000008305) #33 RPS6KL1 (ENSACIG00000008333) #34 Pomacentridae ANCESTRAL SPECIES 19 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a.h #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 Pomacentridae_A ANCESTRAL SPECIES 19 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a.h #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 Amphiprion ANCESTRAL SPECIES 12 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a.h #28 Clown anemonefish MODERN SPECIES 1431 NEK9 (ENSAOCG00000013138) #21 ENSAOCG00000013146 #22 ENSAOCG00000013184 ENSAOCG00000013202 #23 JDP2 (ENSAOCG00000013212) #24 FLVCR2 (ENSAOCG00000013231) #25 ERG28 (ENSAOCG00000013249) #26 ENSAOCG00000013283 Orange clownfish MODERN SPECIES 9 gstz1 (ENSAPEG00000024491) #9 zgc:163014 (ENSAPEG00000024503) tmed8 (ENSAPEG00000000322) #10 NOXRED1 (ENSAPEG00000000345) ATG2B (ENSAPEG00000000393) #11 gskip (ENSAPEG00000000534) #12 npc2.1 (ENSAPEG00000000554) #14 isca2 (ENSAPEG00000000560) #13 EML5 (ENSAPEG00000000586) #15 ttc8 (ENSAPEG00000000736) #16 ENSAPEG00000000801 #17 ENSAPEG00000000832 ##17 ENSAPEG00000000890 ##17 ENSAPEG00000000904 ##17 NEK9 (ENSAPEG00000000928) #21 ENSAPEG00000000944 #22 ENSAPEG00000000961 ENSAPEG00000001019 #23 JDP2 (ENSAPEG00000001021) #24 FLVCR2 (ENSAPEG00000001034) #25 ERG28 (ENSAPEG00000001045) #26 ENSAPEG00000001073 #27 ENSAPEG00000001097 tgfb3 (ENSAPEG00000001156) #28 snx6 (ENSAPEG00000001199) psma3 (ENSAPEG00000001270) ENSAPEG00000001329 ENSAPEG00000001342 irf2bpl (ENSAPEG00000001359) dact1 (ENSAPEG00000001412) lgals3b (ENSAPEG00000001426) Spiny chromis MODERN SPECIES 154 gstz1 (ENSAPOG00000002595) #9 tmed8 (ENSAPOG00000000828) #10 NOXRED1 (ENSAPOG00000002643) ATG2B (ENSAPOG00000002779) #11 gskip (ENSAPOG00000002810) #12 npc2.1 (ENSAPOG00000000060) #14 isca2 (ENSAPOG00000002937) #13 EML5 (ENSAPOG00000003064) #15 ttc8 (ENSAPOG00000003112) #16 ENSAPOG00000003121 #17 ENSAPOG00000000929 ##17 ENSAPOG00000003145 ##17 ENSAPOG00000003161 #18 ENSAPOG00000003174 ##17 NEK9 (ENSAPOG00000003199) #21 ENSAPOG00000003214 #22 ENSAPOG00000003226 ENSAPOG00000003235 #23 JDP2 (ENSAPOG00000003248) #24 FLVCR2 (ENSAPOG00000003292) #25 ERG28 (ENSAPOG00000003330) #26 ENSAPOG00000003392 #27 tgfb3 (ENSAPOG00000003404) #28 IFT43 (ENSAPOG00000003418) #29 GPATCH2L (ENSAPOG00000003442) Bicolor damselfish MODERN SPECIES 244 zgc:163014 (ENSSPAG00000009950) tmed8 (ENSSPAG00000009938) #10 NOXRED1 (ENSSPAG00000009929) ATG2B (ENSSPAG00000009869) #11 gskip (ENSSPAG00000009855) #12 npc2.1 (ENSSPAG00000009838) #14 isca2 (ENSSPAG00000009824) #13 EML5 (ENSSPAG00000009735) #15 ttc8 (ENSSPAG00000009650) #16 ENSSPAG00000009635 #17 ENSSPAG00000009616 ##17 ENSSPAG00000009603 ##17 ENSSPAG00000009596 #18 ENSSPAG00000009588 ##17 NEK9 (ENSSPAG00000009560) #21 ENSSPAG00000009542 #22 MLH3 (ENSSPAG00000009525) ENSSPAG00000009516 #23 ENSSPAG00000009505 ##24 FLVCR2 (ENSSPAG00000009467) #25 ERG28 (ENSSPAG00000009448) #26 ENSSPAG00000009438 #27 ENSSPAG00000009413 tgfb3 (ENSSPAG00000009377) #28 IFT43 (ENSSPAG00000009354) #29 GPATCH2L (ENSSPAG00000009339) ESRRB (ENSSPAG00000009297) #31 prox2 (ENSSPAG00000009278) #32 dlst (ENSSPAG00000009222) #33 RPS6KL1 (ENSSPAG00000009189) #34 ENSSPAG00000009174 #36 Atherinomorphae ANCESTRAL SPECIES 11 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 Oryzias ANCESTRAL SPECIES 3 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.b #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000154297.A.g.a Oryzias_a ANCESTRAL SPECIES 11 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT00940000174567 #20 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.b #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000154297.A.g.a ENSGT00940000159057 Japanese Medaka HdrR MODERN SPECIES 14 zgc:163014 (ENSORLG00000016320) tmed8 (ENSORLG00000016326) #10 ATG2B (ENSORLG00000016349) #11 npc2.1 (ENSORLG00000022170) #14 gskip (ENSORLG00000016354) #12 isca2 (ENSORLG00000016363) #13 EML5 (ENSORLG00000016408) #15 ENSORLG00000016451 #17 ttc8 (ENSORLG00000016437) #16 ENSORLG00000016456 ##17 ENSORLG00000028807 ##17 ENSORLG00000025036 #18 ENSORLG00000026672 ##17 ENSORLG00000029477 ##17 NEK9 (ENSORLG00000016466) #21 ENSORLG00000028769 #22 ENSORLG00000016499 ENSORLG00000016509 #23 JDP2 (ENSORLG00000029498) #24 FLVCR2 (ENSORLG00000016522) ##25 ERG28 (ENSORLG00000016527) #26 ENSORLG00000024651 #27 tgfb3 (ENSORLG00000016565) #28 IFT43 (ENSORLG00000016572) #29 GPATCH2L (ENSORLG00000022664) esrrb (ENSORLG00000016581) #31 prox2 (ENSORLG00000016587) #32 dlst (ENSORLG00000016623) #33 RPS6KL1 (ENSORLG00000016629) #34 LRRC74A (ENSORLG00000016633) ENSORLG00000016639 Chinese medaka MODERN SPECIES 2368 ENSOSIG00000012951 #22 Oryzias_b ANCESTRAL SPECIES 12 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.a.a #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a.a.b #18 ENSGT01030000234575.c.a.a.a.a.b.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000154297.A.g.a Indian medaka MODERN SPECIES ENSOMEG00000021655 #11 ENSOMEG00000021632 ENSOMEG00000021616 #11 npc2.1 (ENSOMEG00000021603) #14 gskip (ENSOMEG00000021589) #12 isca2 (ENSOMEG00000021582) #13 EML5 (ENSOMEG00000021512) #15 ttc8 (ENSOMEG00000021289) #16 ENSOMEG00000021398 #17 ENSOMEG00000021211 ##17 ENSOMEG00000021194 ##17 ENSOMEG00000021178 #18 ENSOMEG00000021163 #18 ENSOMEG00000021145 #18 NEK9 (ENSOMEG00000021129) #21 ENSOMEG00000021096 #22 ENSOMEG00000021076 ENSOMEG00000020995 #23 JDP2 (ENSOMEG00000020954) #24 FLVCR2 (ENSOMEG00000020912) ##25 ERG28 (ENSOMEG00000020883) #26 ENSOMEG00000020849 #27 ENSOMEG00000020840 tgfb3 (ENSOMEG00000020809) #28 IFT43 (ENSOMEG00000020751) #29 GPATCH2L (ENSOMEG00000020697) ESRRB (ENSOMEG00000020638) #31 prox2 (ENSOMEG00000020556) #32 dlst (ENSOMEG00000020530) #33 RPS6KL1 (ENSOMEG00000020459) #34 ANGEL1 (ENSOMEG00000020430) Javanese ricefish MODERN SPECIES 14 tmed8 (ENSOJAG00000005525) #10 NOXRED1 (ENSOJAG00000005479) ATG2B (ENSOJAG00000005376) #11 gskip (ENSOJAG00000005347) #12 npc2.1 (ENSOJAG00000005342) #14 isca2 (ENSOJAG00000005334) #13 EML5 (ENSOJAG00000005258) #15 ttc8 (ENSOJAG00000005178) #16 ENSOJAG00000005164 #17 ENSOJAG00000005156 ##17 ENSOJAG00000005144 ENSOJAG00000005100 #18 ENSOJAG00000005078 #18 ENSOJAG00000005066 ##17 NEK9 (ENSOJAG00000004956) #21 ENSOJAG00000004937 #22 ENSOJAG00000004920 ENSOJAG00000004732 #23 JDP2 (ENSOJAG00000004690) #24 FLVCR2 (ENSOJAG00000004190) ##25 ERG28 (ENSOJAG00000004081) #26 ENSOJAG00000003950 #27 tgfb3 (ENSOJAG00000003928) #28 IFT43 (ENSOJAG00000003918) #29 GPATCH2L (ENSOJAG00000003875) ESRRB (ENSOJAG00000003699) #31 prox2 (ENSOJAG00000003608) #32 dlst (ENSOJAG00000003574) #33 RPS6KL1 (ENSOJAG00000022916) #34 LRRC74A (ENSOJAG00000022909) ANGEL1 (ENSOJAG00000022907) Cyprinodontiformes ANCESTRAL SPECIES 23 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 Aplocheiloidei ANCESTRAL SPECIES 15 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.b #35 ENSGT00940000155454.w.a.a #36 Mangrove rivulus MODERN SPECIES 1 zgc:163014 (ENSKMAG00000003393) tmed8 (ENSKMAG00000003386) #10 NOXRED1 (ENSKMAG00000003374) ATG2B (ENSKMAG00000003284) #11 ENSKMAG00000003248 #11 gskip (ENSKMAG00000003233) #12 npc2.1 (ENSKMAG00000003135) #14 isca2 (ENSKMAG00000003115) #13 EML5 (ENSKMAG00000002983) #15 ttc8 (ENSKMAG00000002905) #16 ENSKMAG00000002881 #17 ENSKMAG00000002868 ##17 ENSKMAG00000002860 ##17 ENSKMAG00000002854 #18 NEK9 (ENSKMAG00000002833) #21 ENSKMAG00000002818 #22 ENSKMAG00000002802 ENSKMAG00000002599 #23 JDP2 (ENSKMAG00000002558) #24 FLVCR2 (ENSKMAG00000002511) #25 ERG28 (ENSKMAG00000002483) #26 ENSKMAG00000002437 #27 tgfb3 (ENSKMAG00000002413) #28 IFT43 (ENSKMAG00000002368) #29 GPATCH2L (ENSKMAG00000002351) ESRRB (ENSKMAG00000002284) #31 prox2 (ENSKMAG00000002267) #32 dlst (ENSKMAG00000002252) #33 RPS6KL1 (ENSKMAG00000002235) #34 ENSKMAG00000002222 #35 ENSKMAG00000002205 #36 Turquoise killifish MODERN SPECIES 1625 NGB (ENSNFUG00015021626) coq6 (ENSNFUG00015021634) ENTPD5 (ENSNFUG00015021720) ENSNFUG00015021761 #7 ALDH6A1 (ENSNFUG00015021782) #8 gstz1 (ENSNFUG00015022022) #9 zgc:163014 (ENSNFUG00015022030) tmed8 (ENSNFUG00015022039) #10 gskip (ENSNFUG00015022080) #12 ISCA2 (ENSNFUG00015022087) #13 EML5 (ENSNFUG00015022102) #15 ttc8 (ENSNFUG00015022143) #16 ENSNFUG00015022179 #17 ENSNFUG00015022182 ENSNFUG00015022184 #18 ENSNFUG00015022220 #22 ENSNFUG00015022229 ENSNFUG00015012380 #23 JDP2 (ENSNFUG00015012547) #24 FLVCR2 (ENSNFUG00015012556) ##25 ERG28 (ENSNFUG00015012618) #26 ENSNFUG00015012630 #27 TGFB3 (ENSNFUG00015012658) #28 IFT43 (ENSNFUG00015012668) #29 GPATCH2L (ENSNFUG00015012681) ESRRB (ENSNFUG00015012693) #31 prox2 (ENSNFUG00015012731) #32 DLST (ENSNFUG00015012758) #33 RPS6KL1 (ENSNFUG00015012869) #34 HSD17B8 (ENSNFUG00015012901) ENSNFUG00015012991 Cyprinodontoidei ANCESTRAL SPECIES 8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 Poeciliinae ANCESTRAL SPECIES 8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 ENSGT00940000155454.w.b #37 Poecilia ANCESTRAL SPECIES 10 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 ENSGT00940000155454.w.b #37 NAME_6 ANCESTRAL SPECIES 6 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517.s #12 ENSGT00390000006223.c #14 ENSGT00390000009517.t #12 ENSGT00390000006223.d #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT01030000234575.c.a.a.a.a.b.b.b ##17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.a #18 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 ENSGT00940000155454.w.b #37 Sailfin molly MODERN SPECIES 364 ENSPLAG00000008095 #11 gskip (ENSPLAG00000008109) #12 NPC2 (ENSPLAG00000008128) #14 isca2 (ENSPLAG00000008136) #13 EML5 (ENSPLAG00000008373) #15 ttc8 (ENSPLAG00000008441) #16 ENSPLAG00000008463 #17 ENSPLAG00000008500 ##17 ENSPLAG00000008590 #18 NEK9 (ENSPLAG00000008620) #21 ENSPLAG00000008628 #22 ENSPLAG00000008640 ENSPLAG00000009128 #23 FLVCR2 (ENSPLAG00000009186) ##25 ERG28 (ENSPLAG00000009211) #26 ENSPLAG00000009224 #27 ENSPLAG00000009247 #27 tgfb3 (ENSPLAG00000009277) #28 IFT43 (ENSPLAG00000009287) #29 GPATCH2L (ENSPLAG00000009312) Amazon molly MODERN SPECIES 282 tmed8 (ENSPFOG00000015795) #10 ENSPFOG00000015794 gskip (ENSPFOG00000015740) #12 NPC2 (ENSPFOG00000015721) #14 ATG2B (ENSPFOG00000015576) #11 gskip (ENSPFOG00000015548) #12 NPC2 (ENSPFOG00000015546) #14 isca2 (ENSPFOG00000015543) #13 EML5 (ENSPFOG00000015280) #15 ttc8 (ENSPFOG00000015227) #16 ENSPFOG00000015213 #17 ENSPFOG00000022333 ##17 ENSPFOG00000015203 ##17 ENSPFOG00000024162 #18 NEK9 (ENSPFOG00000015097) #21 ENSPFOG00000015092 #22 ENSPFOG00000015041 ENSPFOG00000015030 #23 JDP2 (ENSPFOG00000015014) #24 FLVCR2 (ENSPFOG00000014890) ##25 ERG28 (ENSPFOG00000014865) #26 ENSPFOG00000014806 #27 tgfb3 (ENSPFOG00000014756) #28 IFT43 (ENSPFOG00000014703) #29 GPATCH2L (ENSPFOG00000014687) ESRRB (ENSPFOG00000014654) #31 prox2 (ENSPFOG00000014635) #32 dlst (ENSPFOG00000014514) #33 RPS6KL1 (ENSPFOG00000014419) #34 ENSPFOG00000014381 #36 ENSPFOG00000014372 #37 Guppy MODERN SPECIES 453 aldh6a1 (ENSPREG00000010333) #8 gstz1 (ENSPREG00000010267) #9 zgc:163014 (ENSPREG00000010237) tmed8 (ENSPREG00000010221) #10 NOXRED1 (ENSPREG00000010209) ATG2B (ENSPREG00000010076) #11 gskip (ENSPREG00000010046) #12 npc2.1 (ENSPREG00000009939) #14 isca2 (ENSPREG00000009920) #13 EML5 (ENSPREG00000009770) #15 ttc8 (ENSPREG00000009689) #16 ENSPREG00000009739 #17 ENSPREG00000009670 ##17 ENSPREG00000009658 #18 NEK9 (ENSPREG00000009628) #21 ENSPREG00000009615 #22 ENSPREG00000009604 ENSPREG00000009598 #23 FLVCR2 (ENSPREG00000009584) ##25 ERG28 (ENSPREG00000009563) #26 ENSPREG00000009465 #27 tgfb3 (ENSPREG00000009401) #28 IFT43 (ENSPREG00000009385) #29 GPATCH2L (ENSPREG00000009374) ESRRB (ENSPREG00000009351) #31 prox2 (ENSPREG00000009326) #32 dlst (ENSPREG00000009199) #33 RPS6KL1 (ENSPREG00000009143) #34 ENSPREG00000009124 #36 ENSPREG00000009113 #37 ENSPREG00000009102 Platyfish MODERN SPECIES 10 zgc:163014 (ENSXMAG00000015067) tmed8 (ENSXMAG00000026398) #10 NOXRED1 (ENSXMAG00000024964) ATG2B (ENSXMAG00000014982) #11 ENSXMAG00000023766 #11 gskip (ENSXMAG00000021582) #12 npc2.1 (ENSXMAG00000014967) #14 isca2 (ENSXMAG00000014962) #13 EML5 (ENSXMAG00000014899) #15 ttc8 (ENSXMAG00000014881) #16 ENSXMAG00000025642 #17 ENSXMAG00000020956 ##17 ENSXMAG00000028329 ##17 ENSXMAG00000014872 #18 NEK9 (ENSXMAG00000014847) #21 ENSXMAG00000028286 #22 ENSXMAG00000014821 ENSXMAG00000021870 #23 JDP2 (ENSXMAG00000014805) #24 FLVCR2 (ENSXMAG00000026309) ##25 ERG28 (ENSXMAG00000014769) #26 ENSXMAG00000014737 #27 tgfb3 (ENSXMAG00000014713) #28 IFT43 (ENSXMAG00000014700) #29 GPATCH2L (ENSXMAG00000029501) ESRRB (ENSXMAG00000014672) #31 prox2 (ENSXMAG00000014663) #32 dlst (ENSXMAG00000014638) #33 RPS6KL1 (ENSXMAG00000014631) #34 ENSXMAG00000014621 #36 ENSXMAG00000014617 #37 NAME_4 ANCESTRAL SPECIES 18 ENSGT00940000154427.A.c #7 ENSGT00940000156110.c.a #8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT01030000234575.c.a.a.a.a.b.b.a #17 ENSGT01030000234575.c.a.a.a.a.b.a.a.a.b ##17 ENSGT00940000156145 #21 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.d.b.a #25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a.a #36 Sheepshead minnow MODERN SPECIES 490 BBOF1 (ENSCVAG00000022881) #7 aldh6a1 (ENSCVAG00000022872) #8 gstz1 (ENSCVAG00000022840) #9 zgc:163014 (ENSCVAG00000022830) tmed8 (ENSCVAG00000022808) #10 ATG2B (ENSCVAG00000022803) #11 ENSCVAG00000022783 #11 gskip (ENSCVAG00000022739) #12 npc2.1 (ENSCVAG00000022728) #14 isca2 (ENSCVAG00000022712) #13 EML5 (ENSCVAG00000022697) #15 ttc8 (ENSCVAG00000022602) #16 ENSCVAG00000022550 #17 ENSCVAG00000022544 ##17 NEK9 (ENSCVAG00000022531) #21 ENSCVAG00000022493 #22 MLH3 (ENSCVAG00000022485) ENSCVAG00000022477 #23 JDP2 (ENSCVAG00000022457) #24 FLVCR2 (ENSCVAG00000022444) #25 ERG28 (ENSCVAG00000022413) #26 ENSCVAG00000022405 #27 ENSCVAG00000022394 tgfb3 (ENSCVAG00000000577) #28 IFT43 (ENSCVAG00000022374) #29 GPATCH2L (ENSCVAG00000022365) ESRRB (ENSCVAG00000022357) #31 prox2 (ENSCVAG00000022322) #32 dlst (ENSCVAG00000022292) #33 RPS6KL1 (ENSCVAG00000022286) #34 ENSCVAG00000022271 #36 Mummichog MODERN SPECIES 99 ENSFHEG00000017548 #22 ENSFHEG00000017559 ENSFHEG00000017571 Tiger tail seahorse MODERN SPECIES 491 ENSHCOG00000013815 ##17 ENSHCOG00000013821 #18 NEK9 (ENSHCOG00000013844) #21 ENSHCOG00000013850 #22 ENSHCOG00000013862 ENSHCOG00000013914 ENSHCOG00000013934 #23 JDP2 (ENSHCOG00000013941) #24 ENSHCOG00000013945 ##25 FLVCR2 (ENSHCOG00000013964) ##25 ERG28 (ENSHCOG00000013983) #26 ENSHCOG00000013993 #27 ENSHCOG00000014009 tgfb3 (ENSHCOG00000014030) #28 IFT43 (ENSHCOG00000014060) #29 thoc7 (ENSHCOG00000014078) ENSHCOG00000014085 ESRRB (ENSHCOG00000014101) #31 prox2 (ENSHCOG00000014117) #32 Pinecone sodierfish MODERN SPECIES 14 zgc:163014 (ENSMMDG00005009952) tmed8 (ENSMMDG00005009959) #10 NOXRED1 (ENSMMDG00005009966) ENSMMDG00005009972 ATG2B (ENSMMDG00005010017) #11 gskip (ENSMMDG00005010925) #12 npc2.1 (ENSMMDG00005010926) #14 isca2 (ENSMMDG00005010927) #13 EML5 (ENSMMDG00005010928) #15 ttc8 (ENSMMDG00005010931) #16 ENSMMDG00005010955 #17 ENSMMDG00005010959 #20 ENSMMDG00005010962 ##17 NEK9 (ENSMMDG00005010969) #21 ENSMMDG00005011011 ENSMMDG00005011012 #22 MLH3 (ENSMMDG00005011014) ENSMMDG00005011024 #23 JDP2 (ENSMMDG00005011026) #24 FLVCR2 (ENSMMDG00005011033) #25 ERG28 (ENSMMDG00005011058) #26 ENSMMDG00005011064 #27 tgfb3 (ENSMMDG00005011068) #28 IFT43 (ENSMMDG00005011069) #29 GPATCH2L (ENSMMDG00005011070) ESRRB (ENSMMDG00005011073) #31 prox2 (ENSMMDG00005011116) #32 dlst (ENSMMDG00005011127) #33 RPS6KL1 (ENSMMDG00005011406) #34 ENSMMDG00005011423 #35 ENSMMDG00005011425 #37 Cod MODERN SPECIES 18 gstz1 (ENSGMOG00000015791) #9 zgc:163014 (ENSGMOG00000024580) tmed8 (ENSGMOG00000015776) #10 NOXRED1 (ENSGMOG00000025654) ENSGMOG00000015676 #11 gskip (ENSGMOG00000015670) #12 npc2.1 (ENSGMOG00000015657) #14 isca2 (ENSGMOG00000015643) #13 ENSGMOG00000015571 #15 ENSGMOG00000015545 #16 ENSGMOG00000024654 #17 ENSGMOG00000026373 #20 ENSGMOG00000023306 #20 NEK9 (ENSGMOG00000015498) #21 ENSGMOG00000026286 ENSGMOG00000024862 #22 ENSGMOG00000023194 ENSGMOG00000027603 #23 JDP2 (ENSGMOG00000015382) #24 FLVCR2 (ENSGMOG00000024949) ##25 ERG28 (ENSGMOG00000015353) #26 ENSGMOG00000015266 #27 tgfb3 (ENSGMOG00000015251) #28 IFT43 (ENSGMOG00000015229) #29 ENSGMOG00000032252 GPATCH2L (ENSGMOG00000034598) ESRRB (ENSGMOG00000015180) #31 prox2 (ENSGMOG00000015166) #32 dlst (ENSGMOG00000015133) #33 RPS6KL1 (ENSGMOG00000015101) #34 ENSGMOG00000015004 #35 Protacanthopterygii ANCESTRAL SPECIES 48 ENSGT01100000263540.A.b.a.a ENSGT00940000154427.A #7 ENSGT00940000156110.c.a #8 ENSGT00390000006580 #9 ENSGT00940000164710 ENSGT00530000063651.b #10 ENSGT00950000183044.a.a.b ENSGT00620000087966.a #11 ENSGT00390000009517 #12 ENSGT00390000006223 #14 ENSGT00390000005700 #13 ENSGT00940000156613 #15 ENSGT00940000156816 #16 ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a #35 ENSGT00940000155454.w.b #37 Salmoninae ANCESTRAL SPECIES 21 ENSGT00510000048375.f ENSGT00940000159998.f ENSGT00390000015152.d ENSGT01100000263540.A.b.a.a.a ENSGT00940000156110.c.a.d #8 ENSGT00390000006580.j #9 ENSGT00940000164710.e ENSGT00530000063651.b.d #10 ENSGT00620000087966.a.b.a #11 ENSGT00390000009517.v #12 ENSGT00390000005700.o.a #13 ENSGT00940000156613.e #15 ENSGT00940000156816.a #16 ENSGT01020000230338.a.b.b.b.d.b ENSGT00990000209870 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00550000074954.o.b ENSGT00940000164930.a.a #23 ENSGT00940000155693.a.b.j #24 ENSGT01030000234625.B.d.c.a.f ##25 ENSGT00390000010925.f #26 ENSGT00940000162910.p #27 ENSGT00940000155747.g.a.e #28 ENSGT00390000012060.c.a #29 ENSGT00410000025698.b ENSGT00940000153433.A.f.b #31 ENSGT00940000154790.b.a.b.c #32 ENSGT00930000151014.q.e #33 ENSGT00940000159815.c #34 ENSGT00940000155454.w.b #37 Huchen MODERN SPECIES 420 ngb (ENSHHUG00000026400) FAM161B (ENSHHUG00000026394) coq6 (ENSHHUG00000026312) ENTPD5 (ENSHHUG00000026295) aldh6a1 (ENSHHUG00000026286) #8 gstz1 (ENSHHUG00000026240) #9 zgc:163014 (ENSHHUG00000026205) tmed8 (ENSHHUG00000026199) #10 ATG2B (ENSHHUG00000026180) #11 ENSHHUG00000026174 isca2 (ENSHHUG00000026165) #13 EML5 (ENSHHUG00000026149) #15 ttc8 (ENSHHUG00000026093) #16 ENSHHUG00000026088 ENSHHUG00000026078 ENSHHUG00000026072 #22 MLH3 (ENSHHUG00000026050) TMED10 (ENSHHUG00000026046) ENSHHUG00000026045 #23 JDP2 (ENSHHUG00000026044) #24 FLVCR2 (ENSHHUG00000026036) ##25 ERG28 (ENSHHUG00000026028) #26 ENSHHUG00000026025 #27 ENSHHUG00000026013 ENSHHUG00000026011 Salmoninae_a ANCESTRAL SPECIES 36 ENSGT00510000048375.f ENSGT00940000159998.f ENSGT00390000015152.d ENSGT01100000263540.A.b.a.a.a ENSGT00940000156110.c.a.d #8 ENSGT00390000006580.j #9 ENSGT00940000164710.e ENSGT00530000063651.b.d #10 ENSGT00620000087966.a.b.a #11 ENSGT00390000009517.v #12 ENSGT00390000005700.o.a #13 ENSGT00940000156613.e #15 ENSGT00940000156816.a #16 ENSGT01020000230338.a.b.b.b.d.b ENSGT00990000209870 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00550000074954.o.b ENSGT00940000164930.a.a #23 ENSGT00940000155693.a.b.j #24 ENSGT01030000234625.B.d.c.a.f ##25 ENSGT00390000010925.f #26 ENSGT00940000162910.p #27 ENSGT00940000155747.g.a.e #28 ENSGT00390000012060.c.a #29 ENSGT00410000025698.b ENSGT00940000153433.A.f.b #31 ENSGT00940000154790.b.a.b.c #32 ENSGT00930000151014.q.e #33 ENSGT00940000159815.c #34 ENSGT00940000155454.w.b #37 Oncorhynchus ANCESTRAL SPECIES 36 ENSGT00940000159998.f ENSGT00390000015152.d ENSGT01100000263540.A.b.a.a.a ENSGT00940000156110.c.a.d #8 ENSGT00390000006580.j #9 ENSGT00940000164710.e ENSGT00530000063651.b.d #10 ENSGT00620000087966.a.b.a #11 ENSGT00390000005700.o.a #13 ENSGT00940000156613.e #15 ENSGT00940000156816.a #16 ENSGT01020000230338.a.b.b.b.d.a ENSGT01020000230338.a.b.b.b.d.b ENSGT00970000198028.a ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00550000074954.o.b ENSGT00940000164930.a.a #23 ENSGT00940000155693.a.b.j #24 ENSGT01030000234625.B.d.c.a.f ##25 ENSGT00940000162910.p #27 ENSGT01000000219381 ENSGT00940000155747.g.a.e #28 ENSGT00390000012060.c.a #29 ENSGT00410000025698.b ENSGT00940000153433.A.f.b #31 ENSGT00940000154790.b.a.b.c #32 ENSGT00930000151014.q.e #33 ENSGT00940000159815.c #34 ENSGT00940000155454.w.b #37 Oncorhynchus_a ANCESTRAL SPECIES 33 ENSGT00940000159998.f ENSGT00390000015152.d ENSGT01100000263540.A.b.a.a.a ENSGT00940000156110.c.a.d #8 ENSGT00390000006580.j #9 ENSGT00940000164710.e ENSGT00530000063651.b.d #10 ENSGT00620000087966.a.b.a #11 ENSGT00390000005700.o.a #13 ENSGT00940000156613.e #15 ENSGT00940000156816.a #16 ENSGT01020000230338.a.b.b.b.d.a ENSGT01020000230338.a.b.b.b.d.b ENSGT00970000198028.a ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00550000074954.o.b ENSGT00940000164930.a.a #23 ENSGT00940000155693.a.b.j #24 ENSGT01030000234625.B.d.c.a.f ##25 ENSGT01000000219381 ENSGT00940000155747.g.a.e #28 ENSGT00390000012060.c.a #29 ENSGT00410000025698.b ENSGT00940000153433.A.f.b #31 ENSGT00940000154790.b.a.b.c #32 ENSGT00930000151014.q.e #33 ENSGT00940000159815.c #34 ENSGT00940000155454.w.b #37 ENSGT00940000159057 Chinook salmon MODERN SPECIES 32 FAM161B (ENSOTSG00005005962) coq6 (ENSOTSG00005003839) ENTPD5 (ENSOTSG00005002566) aldh6a1 (ENSOTSG00005002555) #8 gstz1 (ENSOTSG00005002552) #9 zgc:163014 (ENSOTSG00005002550) tmed8 (ENSOTSG00005002549) #10 ATG2B (ENSOTSG00005002527) #11 isca2 (ENSOTSG00005002508) #13 EML5 (ENSOTSG00005002496) #15 ttc8 (ENSOTSG00005002378) #16 ENSOTSG00005002352 ENSOTSG00005002350 ENSOTSG00005002345 ENSOTSG00005002340 ENSOTSG00005002338 #22 MLH3 (ENSOTSG00005002258) TMED10 (ENSOTSG00005002120) ENSOTSG00005002118 #23 JDP2 (ENSOTSG00005002116) #24 FLVCR2 (ENSOTSG00005002113) ##25 ENSOTSG00005002110 tgfb3 (ENSOTSG00005002108) #28 IFT43 (ENSOTSG00005002104) #29 ENSOTSG00005002098 GPATCH2L (ENSOTSG00005002096) ESRRB (ENSOTSG00005001745) #31 prox2 (ENSOTSG00005001730) #32 dlst (ENSOTSG00005001317) #33 RPS6KL1 (ENSOTSG00005001308) #34 ENSOTSG00005001307 #37 Coho salmon MODERN SPECIES 5 FAM161B (ENSOKIG00005007367) coq6 (ENSOKIG00005007414) ENTPD5 (ENSOKIG00005008307) ENSOKIG00005008941 gstz1 (ENSOKIG00005008945) #9 ENSOKIG00005008955 #8 zgc:163014 (ENSOKIG00005008992) tmed8 (ENSOKIG00005009028) #10 ATG2B (ENSOKIG00005009075) #11 ISCA2 (ENSOKIG00005009261) #13 EML5 (ENSOKIG00005009323) #15 ttc8 (ENSOKIG00005009376) #16 ENSOKIG00005009457 ENSOKIG00005009471 ENSOKIG00005009478 ENSOKIG00005009487 #22 MLH3 (ENSOKIG00005009504) TMED10 (ENSOKIG00005009588) ENSOKIG00005009625 #23 JDP2 (ENSOKIG00005009628) #24 FLVCR2 (ENSOKIG00005009643) ##25 ENSOKIG00005009674 tgfb3 (ENSOKIG00005009688) #28 IFT43 (ENSOKIG00005009701) #29 GPATCH2L (ENSOKIG00005009723) ESRRB (ENSOKIG00005009753) #31 prox2 (ENSOKIG00005009976) #32 dlst (ENSOKIG00005009991) #33 RPS6KL1 (ENSOKIG00005010037) #34 ENSOKIG00005010052 #35 ENSOKIG00005010072 #37 Rainbow trout MODERN SPECIES 17 coq6 (ENSOMYG00000019280) ENTPD5 (ENSOMYG00000018985) aldh6a1 (ENSOMYG00000018937) #8 gstz1 (ENSOMYG00000037854) #9 zgc:163014 (ENSOMYG00000037772) tmed8 (ENSOMYG00000037735) #10 ENSOMYG00000037672 #11 ENSOMYG00000037565 #13 ENSOMYG00000036851 #15 ENSOMYG00000036656 #16 ENSOMYG00000061376 ENSOMYG00000036612 ENSOMYG00000036589 ENSOMYG00000036584 ENSOMYG00000036569 ENSOMYG00000051866 #22 ENSOMYG00000036407 tmeda (ENSOMYG00000036499) ENSOMYG00000068853 #23 JDP2 (ENSOMYG00000036373) #24 FLVCR2 (ENSOMYG00000035816) ##25 ENSOMYG00000035729 #27 ENSOMYG00000073372 ENSOMYG00000054625 tgfb3 (ENSOMYG00000035710) #28 IFT43 (ENSOMYG00000035697) #29 GPATCH2L (ENSOMYG00000035677) ESRRB (ENSOMYG00000035608) #31 prox2 (ENSOMYG00000035591) #32 dlst (ENSOMYG00000035571) #33 RPS6KL1 (ENSOMYG00000035555) #34 Salmo ANCESTRAL SPECIES 11 ENSGT00390000015152.d ENSGT01100000263540.A.b.a.a.a ENSGT00940000156110.c.a.d #8 ENSGT00390000006580.j #9 ENSGT00940000164710.e ENSGT00530000063651.b.d #10 ENSGT00620000087966.a.b.a #11 ENSGT00390000009517.v #12 ENSGT00990000213299 ENSGT00390000005700.o.a #13 ENSGT00940000156613.e #15 ENSGT00940000156816.a #16 ENSGT01020000230338.a.b.b.b.d.a ENSGT00970000198028 ENSGT00990000209870 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00550000074954.o.b ENSGT00940000164930.a.a #23 ENSGT00940000155693.a.b.j #24 ENSGT01030000234625.B.d.c.a.f ##25 ENSGT00390000010925.f #26 ENSGT00940000162910.p #27 ENSGT00940000155747.g.a.e #28 ENSGT00390000012060.c.a #29 ENSGT00410000025698.b ENSGT00940000153433.A.f.b #31 ENSGT00940000154790.b.a.b.c #32 ENSGT00930000151014.q.e #33 ENSGT00940000159815.c #34 ENSGT00940000155454.w.b #37 Atlantic salmon MODERN SPECIES 28 coq6 (ENSSSAG00000005640) ENTPD5 (ENSSSAG00000005188) aldh6a1 (ENSSSAG00000005146) #8 gstz1 (ENSSSAG00000005138) #9 zgc:163014 (ENSSSAG00000005118) tmed8 (ENSSSAG00000116858) #10 ENSSSAG00000003147 #11 gskip (ENSSSAG00000002968) #12 ENSSSAG00000002964 isca2 (ENSSSAG00000002913) #13 ENSSSAG00000002521 #15 ENSSSAG00000002637 #16 ENSSSAG00000002240 ENSSSAG00000002188 ENSSSAG00000056119 ENSSSAG00000117697 #22 ENSSSAG00000056104 ENSSSAG00000056092 ENSSSAG00000056089 #23 JDP2 (ENSSSAG00000056082) #24 FLVCR2 (ENSSSAG00000055391) ##25 ERG28 (ENSSSAG00000055364) #26 ENSSSAG00000055351 #27 tgfb3 (ENSSSAG00000055340) #28 ift43 (ENSSSAG00000055332) #29 gpatch2l (ENSSSAG00000055320) ESRRB (ENSSSAG00000060549) #31 prox2 (ENSSSAG00000055279) #32 dlst (ENSSSAG00000055262) #33 RPS6KL1 (ENSSSAG00000055254) #34 ENSSSAG00000055246 #37 River trout MODERN SPECIES 17 ENTPD5 (ENSSTUG00000008477) aldh6a1 (ENSSTUG00000008658) #8 gstz1 (ENSSTUG00000008684) #9 zgc:163014 (ENSSTUG00000008702) tmed8 (ENSSTUG00000008749) #10 ATG2B (ENSSTUG00000008758) #11 gskip (ENSSTUG00000008914) #12 ENSSTUG00000008918 isca2 (ENSSTUG00000008934) #13 EML5 (ENSSTUG00000008974) #15 ttc8 (ENSSTUG00000009051) #16 ENSSTUG00000009278 ENSSTUG00000009300 NEK9 (ENSSTUG00000009309) #21 ENSSTUG00000009343 ENSSTUG00000009354 #22 MLH3 (ENSSTUG00000009363) ENSSTUG00000009410 ENSSTUG00000009451 #23 JDP2 (ENSSTUG00000009656) #24 FLVCR2 (ENSSTUG00000009668) ##25 ERG28 (ENSSTUG00000009730) #26 ENSSTUG00000009741 tgfb3 (ENSSTUG00000009751) #28 IFT43 (ENSSTUG00000009766) #29 GPATCH2L (ENSSTUG00000009776) ESRRB (ENSSTUG00000009786) #31 prox2 (ENSSTUG00000009883) #32 dlst (ENSSTUG00000009889) #33 RPS6KL1 (ENSSTUG00000009935) #34 ENSSTUG00000009964 #37 Northern pike MODERN SPECIES 14 bbof1 (ENSELUG00000007976) #7 aldh6a1 (ENSELUG00000007951) #8 gstz1 (ENSELUG00000032439) #9 zgc:163014 (ENSELUG00000007863) tmed8 (ENSELUG00000007850) #10 NOXRED1 (ENSELUG00000007795) ATG2B (ENSELUG00000007766) #11 gskip (ENSELUG00000029432) #12 npc2 (ENSELUG00000007713) #14 isca2 (ENSELUG00000007638) #13 EML5 (ENSELUG00000007606) #15 ttc8 (ENSELUG00000007542) #16 ENSELUG00000028501 NEK9 (ENSELUG00000007481) #21 ENSELUG00000007416 ENSELUG00000007437 #22 MLH3 (ENSELUG00000007401) tmed10 (ENSELUG00000032761) ENSELUG00000007336 #23 JDP2 (ENSELUG00000007321) #24 FLVCR2 (ENSELUG00000007300) ##25 ERG28 (ENSELUG00000007282) #26 ENSELUG00000007250 #27 tgfb3 (ENSELUG00000007196) #28 IFT43 (ENSELUG00000007156) #29 ENSELUG00000030364 GPATCH2L (ENSELUG00000000253) ESRRB (ENSELUG00000007077) #31 prox2 (ENSELUG00000007022) #32 dlst (ENSELUG00000006987) #33 RPS6KL1 (ENSELUG00000006942) #34 Otomorpha ANCESTRAL SPECIES 294 ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.h ##28 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.e ##31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a #35 Otophysi ANCESTRAL SPECIES 252 ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.h ##28 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.e ##31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a #35 Characiphysae ANCESTRAL SPECIES 38 ENSGT00550000074847 ENSGT00390000006979.b ENSGT00730000112193 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01080000258187 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00940000156816 #16 ENSGT01020000230338.a.b.b.b ENSGT00390000018386 ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.e ##31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a #35 ENSGT00940000155454.w.b #37 Characiphysae_b ANCESTRAL SPECIES 39 ENSGT00550000074847 ENSGT00390000006979.b ENSGT00730000112193 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01080000258187 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00940000156816 #16 ENSGT01020000230338.a.b.b.b ENSGT00390000018386 ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000177781 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.e ##31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a #35 ENSGT00940000155454.w.b #37 Characoidei ANCESTRAL SPECIES 41 ENSGT00550000074847 ENSGT00390000006979.b ENSGT00730000112193 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01080000258187 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00940000156816 #16 ENSGT01020000230338.a.b.b.b ENSGT00390000018386 ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.e ##31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a #35 ENSGT00940000155454.w.b #37 ENSGT00940000154297.A.g.a Mexicana tetra MODERN SPECIES 24 atxn3 (ENSAMXG00000035805) SERPINA10 (ENSAMXG00000036511) DDX24 (ENSAMXG00000014635) OTUB2 (ENSAMXG00000014624) ENSAMXG00000032373 asb2b (ENSAMXG00000014614) PRIMA1 (ENSAMXG00000033227) UNC79 (ENSAMXG00000014598) BTBD7 (ENSAMXG00000014584) UBR7 (ENSAMXG00000014579) ttc8 (ENSAMXG00000014575) #16 ENSAMXG00000014568 ndc80 (ENSAMXG00000014557) NEK9 (ENSAMXG00000014545) #21 ENSAMXG00000040113 ENSAMXG00000014521 #22 ENSAMXG00000014513 #23 JDP2 (ENSAMXG00000034514) #24 FLVCR2 (ENSAMXG00000014488) #25 ERG28 (ENSAMXG00000014479) #26 ENSAMXG00000014451 #27 tgfb3 (ENSAMXG00000014435) #28 IFT43 (ENSAMXG00000014420) #29 GPATCH2L (ENSAMXG00000014403) esrrb (ENSAMXG00000034832) ##31 prox2 (ENSAMXG00000014376) #32 dlst (ENSAMXG00000014365) #33 RPS6KL1 (ENSAMXG00000014346) #34 ENSAMXG00000014329 #35 ENSAMXG00000035002 #37 ENSAMXG00000014315 #35 Red-bellied piranha MODERN SPECIES 16 atxn3 (ENSPNAG00000008945) SERPINA10 (ENSPNAG00000001266) DDX24 (ENSPNAG00000008956) OTUB2 (ENSPNAG00000008973) asb2b (ENSPNAG00000008991) PRIMA1 (ENSPNAG00000008997) UNC79 (ENSPNAG00000009251) ENSPNAG00000009291 BTBD7 (ENSPNAG00000009341) UBR7 (ENSPNAG00000001310) ttc8 (ENSPNAG00000009394) #16 ENSPNAG00000009421 ndc80 (ENSPNAG00000009495) NEK9 (ENSPNAG00000009538) #21 ENSPNAG00000009556 ENSPNAG00000009582 #22 ENSPNAG00000009597 #23 JDP2 (ENSPNAG00000009605) #24 FLVCR2 (ENSPNAG00000009615) ##25 ERG28 (ENSPNAG00000009627) #26 ENSPNAG00000009662 #27 tgfb3 (ENSPNAG00000001327) #28 IFT43 (ENSPNAG00000009704) #29 GPATCH2L (ENSPNAG00000009720) esrrb (ENSPNAG00000006181) ##31 dlst (ENSPNAG00000009820) #33 ENSPNAG00000001345 #34 prox2 (ENSPNAG00000009888) #32 CCR6 (ENSPNAG00000009905) ENSPNAG00000006678 #35 ENSPNAG00000001354 #37 Electric eel MODERN SPECIES 468 ENSEEEG00000020709 ENSEEEG00000020710 #22 ENSEEEG00000020711 ENSEEEG00000020712 #23 JDP2 (ENSEEEG00000020713) #24 FLVCR2 (ENSEEEG00000020716) ##25 ERG28 (ENSEEEG00000020760) #26 ENSEEEG00000020762 #27 ENSEEEG00000020763 tgfb3 (ENSEEEG00000020765) #28 IFT43 (ENSEEEG00000020767) #29 GPATCH2L (ENSEEEG00000020769) esrrb (ENSEEEG00000020776) ##31 prox2 (ENSEEEG00000020846) #32 dlst (ENSEEEG00000020867) #33 Channel catfish MODERN SPECIES 28 atxn3 (ENSIPUG00000006959) serpina10 (ENSIPUG00000006996) ddx24 (ENSIPUG00000007005) otub2 (ENSIPUG00000007042) asb2b (ENSIPUG00000007072) ENSIPUG00000007096 PRIMA1 (ENSIPUG00000007111) UNC79 (ENSIPUG00000007129) BTBD7 (ENSIPUG00000007221) UBR7 (ENSIPUG00000007267) ttc8 (ENSIPUG00000007300) #16 Clec4e (ENSIPUG00000007357) ENSIPUG00000007371 ndc80 (ENSIPUG00000007384) nek9 (ENSIPUG00000007451) #21 acyp1 (ENSIPUG00000007512) #22 fos (ENSIPUG00000007522) #23 jdp2 (ENSIPUG00000007544) #24 flvcr2 (ENSIPUG00000007581) ##25 ERG28 (ENSIPUG00000007591) #26 ttll5 (ENSIPUG00000007622) #27 tgfb3 (ENSIPUG00000007701) #28 ift43 (ENSIPUG00000007710) #29 gpatch2l (ENSIPUG00000007721) esrrb (ENSIPUG00000007762) ##31 prox2 (ENSIPUG00000007832) #32 dlst (ENSIPUG00000007845) #33 rps6kl1 (ENSIPUG00000007905) #34 ENSIPUG00000007940 #35 ENSIPUG00000008106 #37 LRRC74A (ENSIPUG00000008118) Cyprinoidei ANCESTRAL SPECIES 176 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00940000153433.A.e ##31 ENSGT00940000154790.b.a.b #32 ENSGT00930000151014.q #33 ENSGT00940000159815 #34 ENSGT00940000155454.w.a #35 ENSGT00940000155454.w.b #37 ENSGT00940000154297.A.g.a ENSGT00940000159057 Cyprininae ANCESTRAL SPECIES 352 ENSGT00390000008195 ENSGT00940000158751 ENSGT00940000156891.a.a ENSGT00940000156668 ENSGT01090000260005.a.b.a.b.a.b.i.b ENSGT01090000260005.a.b.a.b.a.b.i.a ENSGT00940000156499.a.a ENSGT00390000013444.a.a.x ENSGT00390000013444.a.a.w ENSGT00940000156065.a ENSGT00940000159502.d ENSGT00940000155086.A.f ENSGT00940000155086.A.e.a ENSGT00940000153511.b.q.a ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a.b ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a.d #28 ENSGT00390000012060 #29 ENSGT00940000153433.A.e.a.b ##31 ENSGT00940000154790.b.a.b.f #32 ENSGT00930000151014.q.h #33 ENSGT00940000159057.j ENSGT00390000012703.b Goldfish MODERN SPECIES 8 eipr1 (ENSCARG00000006219) ENSCARG00000006208 trappc12 (ENSCARG00000004849) adi1 (ENSCARG00000004773) psen1 (ENSCARG00000004748) ENSCARG00000004741 PAPLN (ENSCARG00000004677) aqr (ENSCARG00000003972) ENSCARG00000003736 FERMT2 (ENSCARG00000003543) DDHD1 (ENSCARG00000003493) bmp4 (ENSCARG00000003482) OTOF (ENSCARG00000003230) syncripl (ENSCARG00000003079) ENSCARG00000003052 ENSCARG00000003051 #22 ENSCARG00000003046 #23 JDP2 (ENSCARG00000003043) #24 ENSCARG00000003042 FLVCR2 (ENSCARG00000003002) ##25 ERG28 (ENSCARG00000002977) #26 ENSCARG00000002968 ENSCARG00000002959 tgfb3 (ENSCARG00000002952) #28 IFT43 (ENSCARG00000002944) #29 ENSCARG00000002940 esrrb (ENSCARG00000002898) ##31 prox2 (ENSCARG00000002885) #32 dlst (ENSCARG00000002601) #33 VASH1 (ENSCARG00000002567) ENSCARG00000002558 Cyprininae_a ANCESTRAL SPECIES 369 ENSGT00940000165425.a.b.b.b.a ENSGT00940000156668 ENSGT01090000260005.a.b.a.b.a.b.i.a ENSGT00940000156499.a.a ENSGT00390000013444.a.a.x ENSGT00390000013444.a.a.w ENSGT00940000156065.a ENSGT00940000159502.d ENSGT00940000155086.A.e.b ENSGT00940000153511.b.q.b ENSGT00900000143321 ENSGT00940000155086.A.e.a ENSGT00940000153511.b.q.a ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00940000164930.a.d #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a.b ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000155747.g.a.d #28 ENSGT00390000012060 #29 ENSGT00940000153433.A.e.a.b ##31 ENSGT00940000154790.b.a.b.f #32 ENSGT00930000151014.q.h #33 ENSGT00940000159057.j ENSGT00390000012703.b Common carp reference MODERN SPECIES 30 trappc12 (ENSCCRG00000025338) adi1 (ENSCCRG00000025334) psen1 (ENSCCRG00000075467) ENSCCRG00000051900 ENSCCRG00000074153 ENSCCRG00000012861 aqr (ENSCCRG00000034110) ENSCCRG00000066002 stxbp6 (ENSCCRG00000015301) ENSCCRG00000064589 ENSCCRG00000082438 ENSCCRG00000037086 ENSCCRG00000075948 syncripl (ENSCCRG00000041944) ENSCCRG00000078494 ENSCCRG00000053187 #22 ENSCCRG00000059288 #23 JDP2 (ENSCCRG00000061353) #24 FLVCR2 (ENSCCRG00000038972) ##25 ERG28 (ENSCCRG00000038975) #26 ENSCCRG00000038024 #27 tgfb3 (ENSCCRG00000002876) #28 ENSCCRG00000079793 IFT43 (ENSCCRG00000076096) #29 esrrb (ENSCCRG00000072814) ##31 prox2 (ENSCCRG00000081041) #32 dlst (ENSCCRG00000070142) #33 ENSCCRG00000081462 #34 ENSCCRG00000074742 ENSCCRG00000072981 #34 ENSCCRG00000063604 Golden-line barbel MODERN SPECIES 119 zgc:113142 (ENSSGRG00000043171) PXDN (ENSSGRG00000043175) MYT1L (ENSSGRG00000043184) eipr1 (ENSSGRG00000043195) trappc12 (ENSSGRG00000043239) psen1 (ENSSGRG00000043391) ENSSGRG00000043395 stxbp6 (ENSSGRG00000043397) fermt2 (ENSSGRG00000043420) DDHD1 (ENSSGRG00000045041) bmp4 (ENSSGRG00000045055) OTOF (ENSSGRG00000045056) syncripl (ENSSGRG00000045057) ENSSGRG00000045058 ENSSGRG00000045059 ENSSGRG00000045060 #22 ENSSGRG00000045061 #23 JDP2 (ENSSGRG00000045062) #24 FLVCR2 (ENSSGRG00000045064) ##25 ENSSGRG00000045071 #27 TGFB3 (ENSSGRG00000045073) ##28 Clupeiformes ANCESTRAL SPECIES 278 ENSGT01020000230338.a.b.b.b ENSGT00940000156145 #21 ENSGT00940000160947 ENSGT00390000011103.B #22 ENSGT00940000164930.a #23 ENSGT00940000155693.a.b #24 ENSGT01030000234625.B.d.c.a ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.e ##31 ENSGT00940000154790.b.a.b #32 ENSGT00940000159815 #34 ENSGT00940000159057 ENSGT00390000012703.b ENSGT00940000153117.B Denticle herring DUPLICATION Denticle herring MODERN SPECIES 201 ENSDCDG00000007138 ENSDCDG00000007114 ENSDCDG00000007097 NEK9 (ENSDCDG00000006991) #21 ENSDCDG00000006919 ENSDCDG00000006908 #22 ENSDCDG00000006853 ENSDCDG00000006458 #23 ENSDCDG00000006284 #24 Denticle herring MODERN SPECIES tdrd9 (ENSDCDG00000002697) ENSDCDG00000002691 ENSDCDG00000002680 ENSDCDG00000002658 dapp1 (ENSDCDG00000002646) ENSDCDG00000002628 rrh (ENSDCDG00000002620) enpep (ENSDCDG00000002498) lrit3b (ENSDCDG00000002470) ENSDCDG00000002453 ENSDCDG00000002449 ENSDCDG00000002444 ENSDCDG00000002407 NEK9 (ENSDCDG00000002377) #21 ENSDCDG00000002372 ENSDCDG00000002370 #22 TMED10 (ENSDCDG00000002366) ENSDCDG00000002363 JDP2 (ENSDCDG00000002360) #24 FLVCR2 (ENSDCDG00000002340) ##25 ERG28 (ENSDCDG00000002332) #26 ENSDCDG00000002330 #27 tgfb3 (ENSDCDG00000002323) #28 IFT43 (ENSDCDG00000002321) #29 ENSDCDG00000002318 prox2 (ENSDCDG00000002316) #32 RPS6KL1 (ENSDCDG00000002313) #34 ANGEL1 (ENSDCDG00000002308) VASH1 (ENSDCDG00000002307) fcf1 (ENSDCDG00000002304) AREL1 (ENSDCDG00000002300) Atlantic herring MODERN SPECIES 5 trappc12 (ENSCHAG00000021281) eipr1 (ENSCHAG00000021098) MYT1L (ENSCHAG00000020739) PXDN (ENSCHAG00000020600) CCR6 (ENSCHAG00000020590) PDIA6 (ENSCHAG00000020474) ENSCHAG00000020436 AREL1 (ENSCHAG00000020367) LTBP2 (ENSCHAG00000020019) pold3 (ENSCHAG00000019995) ktn1 (ENSCHAG00000019797) MSH4 (ENSCHAG00000019692) NEK9 (ENSCHAG00000019580) #21 ENSCHAG00000019571 ENSCHAG00000019557 ENSCHAG00000019548 #22 ENSCHAG00000019541 #23 ENSCHAG00000019518 #24 ENSCHAG00000019487 CLIP4 (ENSCHAG00000019428) ENSCHAG00000019426 ALK (ENSCHAG00000019414) slc39a9 (ENSCHAG00000019379) PLEKHD1 (ENSCHAG00000019213) ENSCHAG00000019203 smoc1 (ENSCHAG00000019185) ENSCHAG00000019162 tmem177 (ENSCHAG00000019159) ENSCHAG00000019127 ENSCHAG00000019113 ENSCHAG00000019080 Osteoglossiformes ANCESTRAL SPECIES 55 ENSGT00390000010397.a.b ENSGT00940000160983 ENSGT00950000182988.a.b.b.b.p ENSGT00940000156128.b.c ENSGT00940000154895.a.b.d ENSGT00530000063484.b.a ENSGT00940000159450 ENSGT00940000159971.f ENSGT00940000160039.l ENSGT00390000010687.a.b ENSGT00940000157557.c ENSGT00940000154359.x ENSGT00940000162696.c.b ENSGT00940000160285.ab ENSGT00940000161394 ENSGT00390000011103.B #22 ENSGT00800000124176 ENSGT00550000074908 ENSGT00550000074954.r.a ENSGT00940000159276.a ENSGT00940000164930.c #23 ENSGT00940000155693.a.a ##24 ENSGT01030000234625.B.d.c.c ##25 ENSGT00390000010925 #26 ENSGT00940000162910 #27 ENSGT00940000162939 ENSGT00940000155747.g.a #28 ENSGT00390000012060 #29 ENSGT00410000025698.b ENSGT00940000153433.A.f #31 ENSGT00940000154790.b.a.b #32 P. kingsleyae MODERN SPECIES 39 AMMECR1 (ENSPKIG00000017331) CHRDL1 (ENSPKIG00000017405) PAK3 (ENSPKIG00000017573) CAPN6 (ENSPKIG00000017646) ENSPKIG00000017693 ENSPKIG00000017731 SLC16A2 (ENSPKIG00000017749) ENSPKIG00000017783 ENSPKIG00000017836 zgc:163098 (ENSPKIG00000017920) WDR44 (ENSPKIG00000018027) ENSPKIG00000018160 ENSPKIG00000018231 LTBP3 (ENSPKIG00000018275) ENSPKIG00000018372 ENSPKIG00000018409 #22 SPTBN2 (ENSPKIG00000018604) ENSPKIG00000018911 ENSPKIG00000018930 pola2 (ENSPKIG00000019005) cdc42ep2 (ENSPKIG00000019081) DPF2 (ENSPKIG00000019113) CHRM1 (ENSPKIG00000019172) ENSPKIG00000019190 ENSPKIG00000019224 ENSPKIG00000019257 zdhhc24 (ENSPKIG00000019276) foxa (ENSPKIG00000019301) rnaseh2c (ENSPKIG00000019331) kat5b (ENSPKIG00000019383) ENSPKIG00000019454 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 4 CHRDL1 (ENSSFOG00015004712) PAK3 (ENSSFOG00015004773) CAPN6 (ENSSFOG00015031003) ENSSFOG00015004818 ENSSFOG00015004841 SLC16A2 (ENSSFOG00015004857) il13ra2 (ENSSFOG00015004872) LRCH2 (ENSSFOG00015031284) zgc:163098 (ENSSFOG00015004962) WDR44 (ENSSFOG00015005037) ENSSFOG00015005047 ENSSFOG00015029008 LTBP3 (ENSSFOG00015005092) ENSSFOG00015005332 ENSSFOG00015026267 ENSSFOG00015005339 #22 SPTBN2 (ENSSFOG00015005369) ENSSFOG00015005474 ENSSFOG00015005551 pola2 (ENSSFOG00015005566) cdc42ep2 (ENSSFOG00015005588) dpf2l (ENSSFOG00015005603) ENSSFOG00015005656 ENSSFOG00015026655 SIPA1 (ENSSFOG00015005691) ENSSFOG00015030916 zdhhc24 (ENSSFOG00015026050) ENSSFOG00015028298 rnaseh2c (ENSSFOG00015005760) kat5b (ENSSFOG00015005779) ENSSFOG00015005814 Asian bonytongue MODERN SPECIES 6 aldh6a1 (ENSSFOG00015016748) #8 gstz1 (ENSSFOG00015016705) #9 zgc:163014 (ENSSFOG00015016668) tmed8 (ENSSFOG00015026633) #10 ENSSFOG00015031275 ATG2B (ENSSFOG00015016533) #11 gskip (ENSSFOG00015032067) #12 npc2.1 (ENSSFOG00015016517) #14 isca2 (ENSSFOG00015025293) #13 EML5 (ENSSFOG00015016421) #15 ttc8 (ENSSFOG00015016384) #16 ENSSFOG00015024647 ENSSFOG00015016354 #16 NEK9 (ENSSFOG00015023989) #21 ENSSFOG00015023986 ENSSFOG00015023983 #22 MLH3 (ENSSFOG00015023979) eif2b2 (ENSSFOG00015023976) tmed10 (ENSSFOG00015033273) fosab (ENSSFOG00015023971) ENSSFOG00015023968 #23 ENSSFOG00015024679 ##24 batf (ENSSFOG00015030749) FLVCR2 (ENSSFOG00015008109) ##25 ERG28 (ENSSFOG00015032324) #26 ENSSFOG00015027867 #27 tgfb3 (ENSSFOG00015031700) #28 IFT43 (ENSSFOG00015023942) #29 GPATCH2L (ENSSFOG00015023938) ESRRB (ENSSFOG00015023935) #31 prox2 (ENSSFOG00015023932) #32 Reedfish DUPLICATION Reedfish MODERN SPECIES ENSECRG00000000827 LTBP3 (ENSECRG00000000894) ENSECRG00000000987 ENSECRG00000001001 ENSECRG00000001019 znrd2 (ENSECRG00000001038) FAM89B (ENSECRG00000001059) ENSECRG00000001131 ENSECRG00000001264 SIPA1 (ENSECRG00000001315) ENSECRG00000001383 ENSECRG00000001406 dpf2 (ENSECRG00000001454) cdc42ep2 (ENSECRG00000001511) pola2 (ENSECRG00000001528) ENSECRG00000001558 #22 ENSECRG00000001595 ENSECRG00000001689 plcb3 (ENSECRG00000001823) ppp1r14ba (ENSECRG00000001899) fkbp2 (ENSECRG00000001913) ENSECRG00000001977 ENSECRG00000002087 ENSECRG00000002099 ENSECRG00000002109 ENSECRG00000002122 PC (ENSECRG00000002143) ctsf (ENSECRG00000002183) banf1 (ENSECRG00000002202) eif1ad (ENSECRG00000002218) sart1 (ENSECRG00000002228) Reedfish MODERN SPECIES 7 ENSECRG00000012191 casq1b (ENSECRG00000012209) PEA15 (ENSECRG00000012229) BDKRB2 (ENSECRG00000012246) ENSECRG00000012260 ENSECRG00000012273 GPR65 (ENSECRG00000012291) kcnk10a (ENSECRG00000012303) ENSECRG00000012323 PTPN21 (ENSECRG00000012351) ZC3H14 (ENSECRG00000012378) EML5 (ENSECRG00000012423) #15 ttc8 (ENSECRG00000012513) #16 NEK9 (ENSECRG00000012553) #21 ENSECRG00000012617 ENSECRG00000012659 #22 ENSECRG00000012679 MLH3 (ENSECRG00000012707) eif2b2 (ENSECRG00000012733) fermt2 (ENSECRG00000012773) ddhd1b (ENSECRG00000012829) bmp4 (ENSECRG00000012847) cgrrf1 (ENSECRG00000012864) CGRRF1 (ENSECRG00000012914) SAMD4A (ENSECRG00000013074) gch1 (ENSECRG00000013129) wdhd1 (ENSECRG00000013162) socs4 (ENSECRG00000013211) ENSECRG00000013232 gnpnat1 (ENSECRG00000013253) styx (ENSECRG00000013277)