Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Primates	ANCESTRAL SPECIES	10	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Haplorrhini	ANCESTRAL SPECIES	20	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.a.a.b ##8	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00390000003422.k.a ##7	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00940000164870	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00390000003422.k.a ##7	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00390000008128.d #18	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00940000164870	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000008294.e.b.a.b.b ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00390000003422.k.a ##7	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00390000008128.d #18	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00940000164870	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00390000003422.k.a ##7	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00390000008128.d #18	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00940000164870	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00940000153425.a.a.a.a.a #37
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00390000003422.l #7	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00390000008128.d #18	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00940000153425.a.a.a.a.a #37	ENSGT00950000182924.B.a.a
Cercopithecinae_d	ANCESTRAL SPECIES	62	ENSGT00390000003422.l #7	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00390000008128.d #18	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00940000153425.a.a.a.a.a #37	ENSGT00950000182924.B.a.a
Sooty mangabey	MODERN SPECIES	348	ENSCATG00000029256 #7	ENSCATG00000037960 #8	CISD2 (ENSCATG00000040750) #9	SLC9B1 (ENSCATG00000022744) #10	SLC9B2 (ENSCATG00000035468) #11	BDH2 (ENSCATG00000012596) #12	CENPE (ENSCATG00000038459) #13	TACR3 (ENSCATG00000036705) #14	CXXC4 (ENSCATG00000036439) #15	TET2 (ENSCATG00000044104) #16	PPA2 (ENSCATG00000016898) #17	ENSCATG00000028897 #18	ARHGEF38 (ENSCATG00000043411) #19	INTS12 (ENSCATG00000029222) #20	GSTCD (ENSCATG00000010872) #21	NPNT (ENSCATG00000029952) #22	TBCK (ENSCATG00000038155) #23	AIMP1 (ENSCATG00000034569) #24	GIMD1 (ENSCATG00000039819) #25	DKK2 (ENSCATG00000042474) #26	ENSCATG00000043463 #27	PAPSS1 (ENSCATG00000028277) #28	SGMS2 (ENSCATG00000044120) #29	CYP2U1 (ENSCATG00000035461) #30	HADH (ENSCATG00000040474) #31	LEF1 (ENSCATG00000035015) #32	ENSCATG00000042942 #33	ENSCATG00000035272 #34	ETNPPL (ENSCATG00000032306) #35	COL25A1 (ENSCATG00000031315) #36	ENSCATG00000031369 #37
Drill	MODERN SPECIES	1491									TET2 (ENSMLEG00000027747) #16	PPA2 (ENSMLEG00000027295) #17	ENSMLEG00000039453 #18	ENSMLEG00000030978 #19	ARHGEF38 (ENSMLEG00000039831) #19	INTS12 (ENSMLEG00000039747) #20	GSTCD (ENSMLEG00000038302) #21	NPNT (ENSMLEG00000040714) #22	TBCK (ENSMLEG00000000098) #23	AIMP1 (ENSMLEG00000040650) #24	GIMD1 (ENSMLEG00000035992) #25
Olive baboon	MODERN SPECIES	13	BDH2 (ENSPANG00000012768) #12	CENPE (ENSPANG00000004584) #13	CNN2 (ENSPANG00000013744)	TACR3 (ENSPANG00000009532) #14	ENSPANG00000038729	CXXC4 (ENSPANG00000043014) #15	ENSPANG00000042158	TET2 (ENSPANG00000005238) #16	ENSPANG00000050354	ENSPANG00000044728	PPA2 (ENSPANG00000001031) #17	ENSPANG00000044802	ARHGEF38 (ENSPANG00000033804) #19	INTS12 (ENSPANG00000005635) #20	GSTCD (ENSPANG00000015065) #21	NPNT (ENSPANG00000012406) #22	TBCK (ENSPANG00000010441) #23	ENSPANG00000051168	AIMP1 (ENSPANG00000024758) #24	GIMD1 (ENSPANG00000046883) #25	DKK2 (ENSPANG00000040092) #26	PAPSS1 (ENSPANG00000015660) #28	SGMS2 (ENSPANG00000024436) #29	CYP2U1 (ENSPANG00000011417) #30	HADH (ENSPANG00000009529) #31	LEF1 (ENSPANG00000020598) #32	ENSPANG00000030212 ##33	ENSPANG00000016693 #34	ETNPPL (ENSPANG00000026027) #35	COL25A1 (ENSPANG00000007137) #36	SEC24B (ENSPANG00000018888)
Macaca	ANCESTRAL SPECIES	18	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00910000147632	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00390000008128.d #18	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00940000164870	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00940000153425.a.a.a.a.a #37
Pig-tailed macaque	MODERN SPECIES	126	ENSMNEG00000027081	SLC9B1 (ENSMNEG00000037351) #10	SLC9B2 (ENSMNEG00000044785) #11	BDH2 (ENSMNEG00000029165) #12	CENPE (ENSMNEG00000040148) #13	ENSMNEG00000018206	TACR3 (ENSMNEG00000033579) #14	CXXC4 (ENSMNEG00000038974) #15	ENSMNEG00000016504	TET2 (ENSMNEG00000032282) #16	PPA2 (ENSMNEG00000043169) #17	ENSMNEG00000028407 #18	ARHGEF38 (ENSMNEG00000029734) #19	INTS12 (ENSMNEG00000043289) #20	GSTCD (ENSMNEG00000032450) #21	NPNT (ENSMNEG00000030807) #22	TBCK (ENSMNEG00000044135) #23	AIMP1 (ENSMNEG00000030181) #24	GIMD1 (ENSMNEG00000032315) #25	DKK2 (ENSMNEG00000034817) #26	ENSMNEG00000037880	ENSMNEG00000044748	PAPSS1 (ENSMNEG00000030623) #28	SGMS2 (ENSMNEG00000034744) #29	CYP2U1 (ENSMNEG00000030586) #30	HADH (ENSMNEG00000031684) #31	LEF1 (ENSMNEG00000043505) #32	ENSMNEG00000042248 #33	ENSMNEG00000030618 #34	ETNPPL (ENSMNEG00000040127) #35	COL25A1 (ENSMNEG00000032070) #36
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00390000003422.k.a ##7	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00390000005727.a.b.a.b.c.a.a.f	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00980000202103.B.a.a.a	ENSGT00940000164870	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT01030000240089	ENSGT00390000008294.e.b.a.b.a.b ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35
Crab-eating macaque	MODERN SPECIES	15	ENSMFAG00000054394	ENSMFAG00000033046 #9	SLC9B1 (ENSMFAG00000042668) #10	SLC9B2 (ENSMFAG00000046399) #11	BDH2 (ENSMFAG00000036890) #12	CENPE (ENSMFAG00000039560) #13	TACR3 (ENSMFAG00000061984) #14	ENSMFAG00000026620	ENSMFAG00000036512	ENSMFAG00000054373	TET2 (ENSMFAG00000043744) #16	PPA2 (ENSMFAG00000040113) #17	ARHGEF38 (ENSMFAG00000041172) #19	INTS12 (ENSMFAG00000042815) #20	GSTCD (ENSMFAG00000000581) #21	NPNT (ENSMFAG00000045955) #22	TBCK (ENSMFAG00000034054) #23	AIMP1 (ENSMFAG00000044822) #24	GIMD1 (ENSMFAG00000007005) #25	DKK2 (ENSMFAG00000032422) #26	ENSMFAG00000054818	ENSMFAG00000003949 #27	PAPSS1 (ENSMFAG00000032785) #28	SGMS2 (ENSMFAG00000041579) #29	CYP2U1 (ENSMFAG00000003841) #30	HADH (ENSMFAG00000033488) #31	ENSMFAG00000002923	LEF1 (ENSMFAG00000037201) #32	ENSMFAG00000062885	ENSMFAG00000034368 ##33	ENSMFAG00000034553 #34
Rhesus	MODERN SPECIES	15	ENSMMUG00000042419 ##7	UBE2D3 (ENSMMUG00000011201) #8	CISD2 (ENSMMUG00000061265) #9	SLC9B1 (ENSMMUG00000011206) #10	SLC9B2 (ENSMMUG00000019083) #11	BDH2 (ENSMMUG00000019085) #12	CENPE (ENSMMUG00000019089) #13	TACR3 (ENSMMUG00000049998) #14	CXXC4 (ENSMMUG00000051649) #15	ENSMMUG00000007216	TET2 (ENSMMUG00000017831) #16	PPA2 (ENSMMUG00000017004) #17	ARHGEF38 (ENSMMUG00000010941) #19	INTS12 (ENSMMUG00000011722) #20	GSTCD (ENSMMUG00000018811) #21	NPNT (ENSMMUG00000023428) #22	TBCK (ENSMMUG00000015756) #23	AIMP1 (ENSMMUG00000015759) #24	GIMD1 (ENSMMUG00000047132) #25	DKK2 (ENSMMUG00000051654) #26	ENSMMUG00000063746	ENSMMUG00000058075	PAPSS1 (ENSMMUG00000019907) #28	SGMS2 (ENSMMUG00000017834) #29	CYP2U1 (ENSMMUG00000058349) #30	HADH (ENSMMUG00000023254) #31	LEF1 (ENSMMUG00000023256) #32	ENSMMUG00000009066	ENSMMUG00000060432	RPL34 (ENSMMUG00000052609) ##33	OSTC (ENSMMUG00000011902) #34
Vervet Monkey	MODERN SPECIES	26	MANBA (ENSCSAG00000004046)	CISD2 (ENSCSAG00000004044) #9	SLC9B1 (ENSCSAG00000004042) #10	SLC9B2 (ENSCSAG00000004039) #11	BDH2 (ENSCSAG00000004035) #12	ENSCSAG00000004023	ENSCSAG00000004017 #13	TACR3 (ENSCSAG00000004016) #14	CXXC4 (ENSCSAG00000004010) #15	TET2 (ENSCSAG00000004006) #16	PPA2 (ENSCSAG00000004005) #17	ENSCSAG00000004002 #19	ENSCSAG00000003997 #19	INTS12 (ENSCSAG00000003995) #20	GSTCD (ENSCSAG00000003991) #21	NPNT (ENSCSAG00000003989) #22	TBCK (ENSCSAG00000003984) #23	AIMP1 (ENSCSAG00000003982) #24	GIMD1 (ENSCSAG00000003981) #25	DKK2 (ENSCSAG00000003978) #26	PAPSS1 (ENSCSAG00000003977) #28	ENSCSAG00000000403	SGMS2 (ENSCSAG00000003975) #29	CYP2U1 (ENSCSAG00000003974) #30	HADH (ENSCSAG00000003972) #31	LEF1 (ENSCSAG00000003970) #32	ETNPPL (ENSCSAG00000003965) #35	COL25A1 (ENSCSAG00000003955) #36	SEC24B (ENSCSAG00000003940)	MCUB (ENSCSAG00000003935)	CASP6 (ENSCSAG00000003933)
Rhinopithecus	ANCESTRAL SPECIES	629											ENSGT00390000017004.a.a.i #17	ENSGT00390000008128.d #18	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22
Black snub-nosed monkey	MODERN SPECIES	2362										PPA2 (ENSRBIG00000043468) #17	ENSRBIG00000040028 #18	ENSRBIG00000038139 #19	ARHGEF38 (ENSRBIG00000000261) #19	INTS12 (ENSRBIG00000035801) #20	GSTCD (ENSRBIG00000040875) #21	NPNT (ENSRBIG00000029303) #22
Golden snub-nosed monkey	MODERN SPECIES	1609								TET2 (ENSRROG00000016562) #16	ENSRROG00000038759	PPA2 (ENSRROG00000040523) #17	ENSRROG00000026308 #18	ENSRROG00000045368 #19	ARHGEF38 (ENSRROG00000034633) #19	INTS12 (ENSRROG00000035377) #20	GSTCD (ENSRROG00000035497) #21	NPNT (ENSRROG00000043309) #22
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00390000003422.k.a ##7	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00910000147167	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00940000164870	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00940000153425.a.a.a.b ##37
Hominidae	ANCESTRAL SPECIES	12	ENSGT00390000003422.l.a #7	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00910000147167	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00940000164870	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00940000153425.a.a.a.b ##37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00940000156660 #9	ENSGT00390000013285.b.a #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00910000147167	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00940000154037.A.n.b.a	ENSGT00390000008128.d #18	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00940000164870	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00940000153425.a.a.a.b ##37
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00940000156660 #9	ENSGT00390000013285.b.a #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00910000147167	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00940000154037.A.n.b.a	ENSGT00390000008128.d #18	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00940000164870	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00940000153425.a.a.a.b ##37
Pan	ANCESTRAL SPECIES	7	ENSGT00940000156660 #9	ENSGT00390000013285.b.a #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00910000147167	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00940000154037.A.n.b.a	ENSGT00390000008128.d #18	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00940000164870	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00940000153425.a.a.a.b ##37
Chimpanzee	MODERN SPECIES	17	SLC9B2 (ENSPTRG00000016328) #11	BDH2 (ENSPTRG00000016329) #12	CENPE (ENSPTRG00000016330) #13	TACR3 (ENSPTRG00000016331) #14	ENSPTRG00000043104	CXXC4 (ENSPTRG00000016332) #15	ENSPTRG00000050676	TET2 (ENSPTRG00000016334) #16	PPA2 (ENSPTRG00000016335) #17	ENSPTRG00000048890	ENSPTRG00000047902 #18	ENSPTRG00000045122 #19	ARHGEF38 (ENSPTRG00000016338) #19	INTS12 (ENSPTRG00000016340) #20	GSTCD (ENSPTRG00000016341) #21	NPNT (ENSPTRG00000016343) #22	TBCK (ENSPTRG00000016344) #23	AIMP1 (ENSPTRG00000016345) #24	GIMD1 (ENSPTRG00000049713) #25	DKK2 (ENSPTRG00000016346) #26	ENSPTRG00000040502	PAPSS1 (ENSPTRG00000016347) #28	SGMS2 (ENSPTRG00000048675) #29	CYP2U1 (ENSPTRG00000016349) #30	HADH (ENSPTRG00000016351) #31	LEF1 (ENSPTRG00000016352) #32	RPL34 (ENSPTRG00000016353) ##33	OSTC (ENSPTRG00000024222) #34	ETNPPL (ENSPTRG00000016355) #35	COL25A1 (ENSPTRG00000016356) #36	ENSPTRG00000052216 ##37
Bonobo	MODERN SPECIES	17	SLC9B1 (ENSPPAG00000029472) #10	SLC9B2 (ENSPPAG00000040623) #11	BDH2 (ENSPPAG00000039330) #12	CENPE (ENSPPAG00000034329) #13	TACR3 (ENSPPAG00000030652) #14	ENSPPAG00000029579	ENSPPAG00000035902 #15	TET2 (ENSPPAG00000033942) #16	PPA2 (ENSPPAG00000042637) #17	ENSPPAG00000039681	ENSPPAG00000034893 #18	ENSPPAG00000037290 #19	ENSPPAG00000027311 #19	INTS12 (ENSPPAG00000040304) #20	GSTCD (ENSPPAG00000039286) #21	NPNT (ENSPPAG00000034385) #22	TBCK (ENSPPAG00000043246) #23	AIMP1 (ENSPPAG00000038355) #24	GIMD1 (ENSPPAG00000034688) #25	DKK2 (ENSPPAG00000038306) #26	ENSPPAG00000042562	PAPSS1 (ENSPPAG00000031578) #28	SGMS2 (ENSPPAG00000041148) #29	CYP2U1 (ENSPPAG00000043345) #30	ENSPPAG00000034253 #31	LEF1 (ENSPPAG00000042910) #32	ENSPPAG00000036097 ##33	ENSPPAG00000043858 #34	ETNPPL (ENSPPAG00000031593) #35	COL25A1 (ENSPPAG00000027300) #36	ENSPPAG00000034006 ##37
Human	MODERN SPECIES	16	NFKB1 (ENSG00000109320)	MANBA (ENSG00000109323)	UBE2D3 (ENSG00000109332) ##8	CISD2 (ENSG00000145354) #9	SLC9B1 (ENSG00000164037) #10	SLC9B2 (ENSG00000164038) #11	BDH2 (ENSG00000164039) #12	CENPE (ENSG00000138778) #13	TACR3 (ENSG00000169836) #14	CXXC4 (ENSG00000168772) #15	TET2 (ENSG00000168769) #16	PPA2 (ENSG00000138777) #17	ARHGEF38 (ENSG00000236699) #19	INTS12 (ENSG00000138785) #20	GSTCD (ENSG00000138780) #21	NPNT (ENSG00000168743) #22	TBCK (ENSG00000145348) #23	AIMP1 (ENSG00000164022) #24	GIMD1 (ENSG00000250298) #25	DKK2 (ENSG00000155011) #26	PAPSS1 (ENSG00000138801) #28	SGMS2 (ENSG00000164023) #29	CYP2U1 (ENSG00000155016) #30	HADH (ENSG00000138796) #31	LEF1 (ENSG00000138795) #32	RPL34 (ENSG00000109475) ##33	OSTC (ENSG00000198856) ##34	ETNPPL (ENSG00000164089) #35	COL25A1 (ENSG00000188517) #36	SEC24B (ENSG00000138802)	MCUB (ENSG00000005059)
Gorilla	MODERN SPECIES	17	SLC9B2 (ENSGGOG00000014260) #11	BDH2 (ENSGGOG00000006381) #12	CENPE (ENSGGOG00000015064) #13	ENSGGOG00000043280	TACR3 (ENSGGOG00000002584) #14	ENSGGOG00000036842	ENSGGOG00000028495 #15	TET2 (ENSGGOG00000024687) #16	PPA2 (ENSGGOG00000002175) #17	ENSGGOG00000037035	ENSGGOG00000040418 #18	ENSGGOG00000011388 #19	ENSGGOG00000027331 #19	INTS12 (ENSGGOG00000013501) #20	GSTCD (ENSGGOG00000017102) #21	NPNT (ENSGGOG00000013715) #22	TBCK (ENSGGOG00000005116) #23	AIMP1 (ENSGGOG00000004226) #24	GIMD1 (ENSGGOG00000024079) #25	DKK2 (ENSGGOG00000027525) #26	ENSGGOG00000011380	PAPSS1 (ENSGGOG00000014736) #28	SGMS2 (ENSGGOG00000012598) #29	CYP2U1 (ENSGGOG00000014716) #30	ENSGGOG00000004423 #31	LEF1 (ENSGGOG00000010692) #32	ENSGGOG00000007650 ##33	ENSGGOG00000026873 #34	ETNPPL (ENSGGOG00000012323) #35	COL25A1 (ENSGGOG00000005574) #36	SEC24B (ENSGGOG00000006806)
Orangutan	MODERN SPECIES	17	ENSPPYG00000034261 #7	ENSPPYG00000014967 #8	SLC9B1 (ENSPPYG00000014969) #10	ENSPPYG00000014968 #9	SLC9B2 (ENSPPYG00000014970) #11	BDH2 (ENSPPYG00000025868) #12	CENPE (ENSPPYG00000014971) #13	TACR3 (ENSPPYG00000014972) #14	CXXC4 (ENSPPYG00000014973) #15	TET2 (ENSPPYG00000014974) #16	PPA2 (ENSPPYG00000014975) #17	ENSPPYG00000016915	ENSPPYG00000014976 #19	INTS12 (ENSPPYG00000014977) #20	GSTCD (ENSPPYG00000014978) #21	NPNT (ENSPPYG00000014979) #22	TBCK (ENSPPYG00000014980) #23	AIMP1 (ENSPPYG00000014981) #24	GIMD1 (ENSPPYG00000035934) #25	DKK2 (ENSPPYG00000014982) #26	PAPSS1 (ENSPPYG00000014983) #28	SGMS2 (ENSPPYG00000014984) #29	CYP2U1 (ENSPPYG00000014985) #30	ENSPPYG00000014986 #31	LEF1 (ENSPPYG00000014987) #32	ENSPPYG00000032263	ENSPPYG00000014988 ##33	ENSPPYG00000030600 #34	ETNPPL (ENSPPYG00000014989) #35	COL25A1 (ENSPPYG00000014990) #36	ENSPPYG00000039944 ##37
Gibbon	MODERN SPECIES	24	ENSNLEG00000026930 #9	SLC9B1 (ENSNLEG00000026701) #10	SLC9B2 (ENSNLEG00000026685) #11	BDH2 (ENSNLEG00000026601) #12	CENPE (ENSNLEG00000026953) #13	TACR3 (ENSNLEG00000013312) #14	CXXC4 (ENSNLEG00000013306) #15	ENSNLEG00000028470	TET2 (ENSNLEG00000013289) #16	PPA2 (ENSNLEG00000013175) #17	ENSNLEG00000018619	ENSNLEG00000013162 #19	ENSNLEG00000034939 #19	INTS12 (ENSNLEG00000013144) #20	GSTCD (ENSNLEG00000013117) #21	NPNT (ENSNLEG00000013090) #22	TBCK (ENSNLEG00000013047) #23	AIMP1 (ENSNLEG00000033706) #24	GIMD1 (ENSNLEG00000013029) #25	DKK2 (ENSNLEG00000030139) #26	ENSNLEG00000031216	PAPSS1 (ENSNLEG00000034537) #28	SGMS2 (ENSNLEG00000012986) #29	ENSNLEG00000012977 #30	ENSNLEG00000012951 #31	LEF1 (ENSNLEG00000012942) #32	ENSNLEG00000012934 ##33	ENSNLEG00000012929 #34	ETNPPL (ENSNLEG00000012907) #35	COL25A1 (ENSNLEG00000012906) #36	ENSNLEG00000033361 ##37
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218.g #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Cebidae	ANCESTRAL SPECIES	4	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00910000147632	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218.g #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Cebidae_a	ANCESTRAL SPECIES	21	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00910000147632	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218.g #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000001376.ab.b.b #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00940000153425.a.a.a.b ##37
Capuchin	MODERN SPECIES	604										TET2 (ENSCCAG00000023562) #16	PPA2 (ENSCCAG00000030431) #17	ENSCCAG00000035442 #19	ARHGEF38 (ENSCCAG00000035098) #19	INTS12 (ENSCCAG00000024881) #20	GSTCD (ENSCCAG00000023452) #21	NPNT (ENSCCAG00000033626) #22
Bolivian squirrel monkey	MODERN SPECIES	75	BDH2 (ENSSBOG00000029174) #12	CENPE (ENSSBOG00000020277) #13	ENSSBOG00000024929	ENSSBOG00000020945	ENSSBOG00000020829	ENSSBOG00000031964	TACR3 (ENSSBOG00000012204) #14	CXXC4 (ENSSBOG00000027167) #15	ENSSBOG00000018487	TET2 (ENSSBOG00000023723) #16	PPA2 (ENSSBOG00000027994) #17	ENSSBOG00000025203 #19	ARHGEF38 (ENSSBOG00000030065) #19	ENSSBOG00000026514 #20	GSTCD (ENSSBOG00000028318) #21	NPNT (ENSSBOG00000003943) #22	TBCK (ENSSBOG00000031928) #23	AIMP1 (ENSSBOG00000035710) #24	GIMD1 (ENSSBOG00000033555) #25	DKK2 (ENSSBOG00000019910) #26	ENSSBOG00000024743	PAPSS1 (ENSSBOG00000002114) #28	SGMS2 (ENSSBOG00000025320) #29	CYP2U1 (ENSSBOG00000030554) #30	ENSSBOG00000015235	HADH (ENSSBOG00000021987) #31	LEF1 (ENSSBOG00000028826) #32	ENSSBOG00000026498 ##33	ENSSBOG00000033335	ENSSBOG00000036162 ##34	ETNPPL (ENSSBOG00000036171) #35
Marmoset	MODERN SPECIES	15	UBE2D3 (ENSCJAG00000038989) ##8	CISD2 (ENSCJAG00000043402) #9	SLC9B1 (ENSCJAG00000015534) #10	SLC9B2 (ENSCJAG00000015568) #11	BDH2 (ENSCJAG00000039643) #12	CENPE (ENSCJAG00000015594) #13	ENSCJAG00000064372	TACR3 (ENSCJAG00000072109) #14	CXXC4 (ENSCJAG00000047711) #15	ENSCJAG00000072461	TET2 (ENSCJAG00000015737) #16	PPA2 (ENSCJAG00000015715) #17	ENSCJAG00000015747 #19	INTS12 (ENSCJAG00000015751) #20	GSTCD (ENSCJAG00000015763) #21	NPNT (ENSCJAG00000015795) #22	ENSCJAG00000081165	TBCK (ENSCJAG00000015822) #23	AIMP1 (ENSCJAG00000015885) #24	GIMD1 (ENSCJAG00000015900) #25	ENSCJAG00000079824	DKK2 (ENSCJAG00000057432) #26	ENSCJAG00000065541	ENSCJAG00000070747	PAPSS1 (ENSCJAG00000015905) #28	ENSCJAG00000079677	SGMS2 (ENSCJAG00000015928) #29	ENSCJAG00000052711	HADH (ENSCJAG00000015938) #31	CYP2U1 (ENSCJAG00000019545) #30	ENSCJAG00000082049
Mas night monkey	MODERN SPECIES	922	UBE2D3 (ENSANAG00000022072) #8	CISD2 (ENSANAG00000029711) #9	SLC9B1 (ENSANAG00000035905) #10	SLC9B2 (ENSANAG00000021471) #11	BDH2 (ENSANAG00000037831) #12	CENPE (ENSANAG00000029689) #13	TACR3 (ENSANAG00000026054) #14	ENSANAG00000033428	CXXC4 (ENSANAG00000028359) #15	TET2 (ENSANAG00000031123) #16	PPA2 (ENSANAG00000026334) #17	ARHGEF38 (ENSANAG00000032882) #19	INTS12 (ENSANAG00000036142) #20	ENSANAG00000030991	GSTCD (ENSANAG00000037477) #21	NPNT (ENSANAG00000019828) #22	TBCK (ENSANAG00000028672) #23	AIMP1 (ENSANAG00000033416) #24	GIMD1 (ENSANAG00000034671) #25	DKK2 (ENSANAG00000036052) #26	PAPSS1 (ENSANAG00000030435) #28	SGMS2 (ENSANAG00000031769) #29	CYP2U1 (ENSANAG00000021010) #30	HADH (ENSANAG00000024891) #31	LEF1 (ENSANAG00000031040) #32	ENSANAG00000026768 ##33	ENSANAG00000024765 #34	ETNPPL (ENSANAG00000020605) #35	COL25A1 (ENSANAG00000019852) #36	SEC24B (ENSANAG00000030045)	ENSANAG00000027362
Tarsier	MODERN SPECIES	3931																NPNT (ENSTSYG00000012250) #22	TBCK (ENSTSYG00000004103) #23	AIMP1 (ENSTSYG00000013788) #24	GIMD1 (ENSTSYG00000036691) #25
Strepsirrhini	ANCESTRAL SPECIES	18	ENSGT00940000158926	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b.z #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Bushbaby	MODERN SPECIES	218	NFKB1 (ENSOGAG00000012840)	MANBA (ENSOGAG00000012852)	ENSOGAG00000012860 ##8	CISD2 (ENSOGAG00000012865) #9	ENSOGAG00000031776	SLC9B1 (ENSOGAG00000001454) #10	SLC9B2 (ENSOGAG00000001456) #11	BDH2 (ENSOGAG00000001458) #12	TACR3 (ENSOGAG00000001467) #14	CXXC4 (ENSOGAG00000026362) #15	TET2 (ENSOGAG00000003213) #16	PPA2 (ENSOGAG00000003361) #17	ARHGEF38 (ENSOGAG00000005499) #19	INTS12 (ENSOGAG00000005500) #20	GSTCD (ENSOGAG00000005503) #21	NPNT (ENSOGAG00000005507) #22	TBCK (ENSOGAG00000005510) #23	AIMP1 (ENSOGAG00000002089) #24	GIMD1 (ENSOGAG00000026809) #25	DKK2 (ENSOGAG00000000287) #26	PAPSS1 (ENSOGAG00000013080) #28	SGMS2 (ENSOGAG00000004363) #29	CYP2U1 (ENSOGAG00000015840) #30	HADH (ENSOGAG00000004364) #31	LEF1 (ENSOGAG00000004368) #32	ENSOGAG00000006774 ##33	OSTC (ENSOGAG00000033684) #34	ETNPPL (ENSOGAG00000006777) #35	COL25A1 (ENSOGAG00000006779) #36
Lemuriformes	ANCESTRAL SPECIES	22								ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b.z #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Mouse lemur	MODERN SPECIES	20						CENPE (ENSMICG00000005101) #13	TACR3 (ENSMICG00000046253) #14	ENSMICG00000042331	CXXC4 (ENSMICG00000045183) #15	TET2 (ENSMICG00000035595) #16	ENSMICG00000013570 #17	ENSMICG00000047313 #19	ENSMICG00000010754 #19	INTS12 (ENSMICG00000010760) #20	GSTCD (ENSMICG00000030887) #21	NPNT (ENSMICG00000010776) #22	TBCK (ENSMICG00000010786) #23	AIMP1 (ENSMICG00000010202) #24	GIMD1 (ENSMICG00000045116) #25	DKK2 (ENSMICG00000027157) #26	ENSMICG00000017692	PAPSS1 (ENSMICG00000016262) #28	SGMS2 (ENSMICG00000008740) #29	CYP2U1 (ENSMICG00000012817) #30	HADH (ENSMICG00000012822) #31	LEF1 (ENSMICG00000012833) #32	ENSMICG00000041882 #33	OSTC (ENSMICG00000002182) #34	ENSMICG00000002187 #35	ENSMICG00000037629	COL25A1 (ENSMICG00000002737) #36
Lemuriformes_a	ANCESTRAL SPECIES	108									ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b.z #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Coquerels sifaka	MODERN SPECIES	612								TACR3 (ENSPCOG00000023839) #14	CXXC4 (ENSPCOG00000018137) #15	TET2 (ENSPCOG00000024542) #16	ENSPCOG00000016895 #17	ENSPCOG00000021618 #19	ENSPCOG00000028147 #19	INTS12 (ENSPCOG00000018476) #20	GSTCD (ENSPCOG00000010589) #21	NPNT (ENSPCOG00000028528) #22	TBCK (ENSPCOG00000017320) #23	AIMP1 (ENSPCOG00000001426) #24	GIMD1 (ENSPCOG00000012757) #25	DKK2 (ENSPCOG00000016835) #26	PAPSS1 (ENSPCOG00000022421) #28	SGMS2 (ENSPCOG00000002586) #29	CYP2U1 (ENSPCOG00000027221) #30	HADH (ENSPCOG00000010610) #31	LEF1 (ENSPCOG00000012815) #32	ENSPCOG00000010384 ##33	OSTC (ENSPCOG00000014109) #34	ETNPPL (ENSPCOG00000007840) #35	COL25A1 (ENSPCOG00000016653) #36	SEC24B (ENSPCOG00000015907)	MCUB (ENSPCOG00000021218)
Greater bamboo lemur	MODERN SPECIES	41									ENSPSMG00000008033 #15	TET2 (ENSPSMG00000008057) #16	PPA2 (ENSPSMG00000008130) #17	ENSPSMG00000008154 #19	ENSPSMG00000008160 #19	INTS12 (ENSPSMG00000008195) #20	GSTCD (ENSPSMG00000008240) #21	NPNT (ENSPSMG00000008414) #22	TBCK (ENSPSMG00000008659) #23	AIMP1 (ENSPSMG00000008692) #24	DKK2 (ENSPSMG00000008696) #26	PAPSS1 (ENSPSMG00000008731) #28	ENSPSMG00000008741 #29	CYP2U1 (ENSPSMG00000008757) #30	HADH (ENSPSMG00000008870) #31	LEF1 (ENSPSMG00000009019) #32	ENSPSMG00000009043 #33	OSTC (ENSPSMG00000009069) #34	COL25A1 (ENSPSMG00000009240) #36	ETNPPL (ENSPSMG00000009391) #35	SEC24B (ENSPSMG00000009514)	MCUB (ENSPSMG00000009554)	CASP6 (ENSPSMG00000009580)
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000008294.f ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Tree shrew	MODERN SPECIES	1881														INTS12 (ENSTBEG00000009559) #20	GSTCD (ENSTBEG00000001421) #21	NPNT (ENSTBEG00000002734) #22	TBCK (ENSTBEG00000003132) #23	AIMP1 (ENSTBEG00000004412) #24	DKK2 (ENSTBEG00000004691) #26
Glires	ANCESTRAL SPECIES	8	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000008294.f ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Rodentia	ANCESTRAL SPECIES	13	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Rodentia_B	ANCESTRAL SPECIES	30	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Myomorpha	ANCESTRAL SPECIES	42	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Muroidea	ANCESTRAL SPECIES	53	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Chinese hamster chok1gshd	MODERN SPECIES	66	Manba (ENSCGRG00001023079)	Ube2d3 (ENSCGRG00001015878) ##8	Cisd2 (ENSCGRG00001009884) #9	Slc9b1 (ENSCGRG00001019186) #10	Slc9b2 (ENSCGRG00001013085) #11	ENSCGRG00001008342 #12	ENSCGRG00001000064 #12	Cenpe (ENSCGRG00001024643) #13	Tacr3 (ENSCGRG00001001027) #14	Cxxc4 (ENSCGRG00001012155) #15	ENSCGRG00001016201 #16	Ppa2 (ENSCGRG00001013135) #17	Arhgef38 (ENSCGRG00001012615) #19	Ints12 (ENSCGRG00001017648) #20	Gstcd (ENSCGRG00001013678) #21	Npnt (ENSCGRG00001011234) #22	Tbck (ENSCGRG00001014137) #23	Aimp1 (ENSCGRG00001012622) #24	Gimd1 (ENSCGRG00001011642) #25	Dkk2 (ENSCGRG00001015913) #26	Papss1 (ENSCGRG00001022641) #28	Sgms2 (ENSCGRG00001022561) #29	Cyp2u1 (ENSCGRG00001000440) #30	Hadh (ENSCGRG00001022551) #31	Lef1 (ENSCGRG00001022697) #32	Rpl34 (ENSCGRG00001011923) ##33	ENSCGRG00001012885 #34	Etnppl (ENSCGRG00001001866) #35	Col25a1 (ENSCGRG00001016091) #36	Sec24b (ENSCGRG00001011377)	Mcub (ENSCGRG00001013554)
Golden Hamster	MODERN SPECIES	736	Ube2d3 (ENSMAUG00000008002) ##8	Cisd2 (ENSMAUG00000018110) #9	ENSMAUG00000018374	Slc9b1 (ENSMAUG00000000272) #10	Slc9b2 (ENSMAUG00000000640) #11	Bdh2 (ENSMAUG00000002880) #12	Cenpe (ENSMAUG00000009004) #13	Tacr3 (ENSMAUG00000004511) #14	Cxxc4 (ENSMAUG00000007790) #15	ENSMAUG00000016150	Tet2 (ENSMAUG00000009273) #16	Ppa2 (ENSMAUG00000011715) #17	Arhgef38 (ENSMAUG00000000124) #19	ENSMAUG00000015392 #20	Gstcd (ENSMAUG00000012628) #21	Npnt (ENSMAUG00000007621) #22	Tbck (ENSMAUG00000014349) #23	ENSMAUG00000018723	Gimd1 (ENSMAUG00000019274) #25	Dkk2 (ENSMAUG00000000149) #26
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Prairie vole	MODERN SPECIES	8	Ube2d3 (ENSMOCG00000016276) ##8	Cisd2 (ENSMOCG00000010945) #9	Slc9b1 (ENSMOCG00000020773) #10	Slc9b2 (ENSMOCG00000010054) #11	Bdh2 (ENSMOCG00000006266) #12	Cenpe (ENSMOCG00000017832) #13	ENSMOCG00000008569	Tacr3 (ENSMOCG00000010143) #14	Cxxc4 (ENSMOCG00000003388) #15	Tet2 (ENSMOCG00000019397) #16	Ppa2 (ENSMOCG00000021031) #17	ENSMOCG00000010005	Arhgef38 (ENSMOCG00000000958) #19	Ints12 (ENSMOCG00000014627) #20	Gstcd (ENSMOCG00000012500) #21	Npnt (ENSMOCG00000016277) #22	Tbck (ENSMOCG00000000214) #23	ENSMOCG00000001103 #24	Gimd1 (ENSMOCG00000017308) #25	Dkk2 (ENSMOCG00000016432) #26	ENSMOCG00000013454	Papss1 (ENSMOCG00000012328) #28	Sgms2 (ENSMOCG00000008205) #29	Cyp2u1 (ENSMOCG00000012427) #30	Hadh (ENSMOCG00000002166) #31	Lef1 (ENSMOCG00000017897) #32	ENSMOCG00000012371 #33	Ostc (ENSMOCG00000003130) #34	Etnppl (ENSMOCG00000013627) #35	Col25a1 (ENSMOCG00000005127) #36	Sec24b (ENSMOCG00000010749)
Northern American deer mouse	MODERN SPECIES	19	Ube2d3 (ENSPEMG00000024661) ##8	Cisd2 (ENSPEMG00000012367) #9	Slc9b1 (ENSPEMG00000015739) #10	Slc9b2 (ENSPEMG00000018580) #11	Bdh2 (ENSPEMG00000008358) #12	Cenpe (ENSPEMG00000003135) #13	ENSPEMG00000025985	Tacr3 (ENSPEMG00000026875) #14	Cxxc4 (ENSPEMG00000024400) #15	Tet2 (ENSPEMG00000003379) #16	ENSPEMG00000014121	Ppa2 (ENSPEMG00000015922) #17	Arhgef38 (ENSPEMG00000008305) #19	Ints12 (ENSPEMG00000005181) #20	Gstcd (ENSPEMG00000007441) #21	Npnt (ENSPEMG00000008059) #22	Tbck (ENSPEMG00000008071) #23	Aimp1 (ENSPEMG00000003730) #24	Gimd1 (ENSPEMG00000010104) #25	Dkk2 (ENSPEMG00000024321) #26	Papss1 (ENSPEMG00000008733) #28	Sgms2 (ENSPEMG00000027110) #29	Cyp2u1 (ENSPEMG00000012213) #30	Hadh (ENSPEMG00000020330) #31	Lef1 (ENSPEMG00000011796) #32	ENSPEMG00000010540 #33	Ostc (ENSPEMG00000001349) #34	Etnppl (ENSPEMG00000009696) #35	Col25a1 (ENSPEMG00000000474) #36	Sec24b (ENSPEMG00000016956)	Mcub (ENSPEMG00000008411)
Murinae	ANCESTRAL SPECIES	5	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.a.a.a.l ##8	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Mus	ANCESTRAL SPECIES	7	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.a.a.a.l.b ##8	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Mus_A	ANCESTRAL SPECIES	9	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.a.a.a.l.b ##8	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Ryukyu mouse	MODERN SPECIES	12	Nfkb1 (MGP_CAROLIEiJ_G0025661)	Manba (MGP_CAROLIEiJ_G0025660)	MGP_CAROLIEiJ_G0025659 ##8	Cisd2 (MGP_CAROLIEiJ_G0025658) #9	Slc9b1 (MGP_CAROLIEiJ_G0025657) #10	Slc9b2 (MGP_CAROLIEiJ_G0025656) #11	Bdh2 (MGP_CAROLIEiJ_G0025655) #12	Cenpe (MGP_CAROLIEiJ_G0025654) #13	Tacr3 (MGP_CAROLIEiJ_G0025653) #14	Cxxc4 (MGP_CAROLIEiJ_G0025652) #15	Tet2 (MGP_CAROLIEiJ_G0025651) #16	Ppa2 (MGP_CAROLIEiJ_G0025650) #17	Arhgef38 (MGP_CAROLIEiJ_G0025649) #19	Ints12 (MGP_CAROLIEiJ_G0025648) #20	Gstcd (MGP_CAROLIEiJ_G0025647) #21	Npnt (MGP_CAROLIEiJ_G0025646) #22	Tbck (MGP_CAROLIEiJ_G0025645) #23	Aimp1 (MGP_CAROLIEiJ_G0025644) #24	Gimd1 (MGP_CAROLIEiJ_G0025643) #25	Dkk2 (MGP_CAROLIEiJ_G0025642) #26	Papss1 (MGP_CAROLIEiJ_G0025641) #28	Sgms2 (MGP_CAROLIEiJ_G0025640) #29	Cyp2u1 (MGP_CAROLIEiJ_G0025639) #30	Hadh (MGP_CAROLIEiJ_G0025638) #31	Lef1 (MGP_CAROLIEiJ_G0025637) #32	Rpl34 (MGP_CAROLIEiJ_G0025636) ##33	Ostc (MGP_CAROLIEiJ_G0025635) #34	Etnppl (MGP_CAROLIEiJ_G0025634) #35	Col25a1 (MGP_CAROLIEiJ_G0025633) #36	Sec24b (MGP_CAROLIEiJ_G0025632)	Mcub (MGP_CAROLIEiJ_G0025631)
Mus_B	ANCESTRAL SPECIES	8	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Mouse	MODERN SPECIES	12	Nfkb1 (ENSMUSG00000028163)	Manba (ENSMUSG00000028164)	Ube2d3 (ENSMUSG00000078578) ##8	Cisd2 (ENSMUSG00000028165) #9	Slc9b1 (ENSMUSG00000050150) #10	Slc9b2 (ENSMUSG00000037994) #11	Bdh2 (ENSMUSG00000028167) #12	Cenpe (ENSMUSG00000045328) #13	Tacr3 (ENSMUSG00000028172) #14	Cxxc4 (ENSMUSG00000044365) #15	Tet2 (ENSMUSG00000040943) #16	Ppa2 (ENSMUSG00000028013) #17	Arhgef38 (ENSMUSG00000040969) #19	Ints12 (ENSMUSG00000028016) #20	Gstcd (ENSMUSG00000028018) #21	Npnt (ENSMUSG00000040998) #22	Tbck (ENSMUSG00000028030) #23	Aimp1 (ENSMUSG00000028029) #24	Gimd1 (ENSMUSG00000091721) #25	Dkk2 (ENSMUSG00000028031) #26	Papss1 (ENSMUSG00000028032) #28	Sgms2 (ENSMUSG00000050931) #29	Cyp2u1 (ENSMUSG00000027983) #30	Hadh (ENSMUSG00000027984) #31	Lef1 (ENSMUSG00000027985) #32	Rpl34 (ENSMUSG00000062006) ##33	Ostc (ENSMUSG00000041084) #34	Etnppl (ENSMUSG00000019232) #35	Col25a1 (ENSMUSG00000058897) #36	Sec24b (ENSMUSG00000001052)	Mcub (ENSMUSG00000027994)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.a.a.a.l.b ##8	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
spretus	MODERN SPECIES	12	Nfkb1 (MGP_SPRETEiJ_G0026615)	Manba (MGP_SPRETEiJ_G0026614)	MGP_SPRETEiJ_G0026613 ##8	Cisd2 (MGP_SPRETEiJ_G0026612) #9	Slc9b1 (MGP_SPRETEiJ_G0026611) #10	Slc9b2 (MGP_SPRETEiJ_G0026610) #11	Bdh2 (MGP_SPRETEiJ_G0026609) #12	Cenpe (MGP_SPRETEiJ_G0026608) #13	Tacr3 (MGP_SPRETEiJ_G0026607) #14	MGP_SPRETEiJ_G0026606 #15	Tet2 (MGP_SPRETEiJ_G0026604) #16	Ppa2 (MGP_SPRETEiJ_G0026603) #17	Arhgef38 (MGP_SPRETEiJ_G0026602) #19	Ints12 (MGP_SPRETEiJ_G0026601) #20	Gstcd (MGP_SPRETEiJ_G0026600) #21	Npnt (MGP_SPRETEiJ_G0026599) #22	Tbck (MGP_SPRETEiJ_G0026598) #23	Aimp1 (MGP_SPRETEiJ_G0026597) #24	Gimd1 (MGP_SPRETEiJ_G0026596) #25	Dkk2 (MGP_SPRETEiJ_G0026595) #26	Papss1 (MGP_SPRETEiJ_G0026594) #28	Sgms2 (MGP_SPRETEiJ_G0026593) #29	Cyp2u1 (MGP_SPRETEiJ_G0026592) #30	Hadh (MGP_SPRETEiJ_G0026591) #31	Lef1 (MGP_SPRETEiJ_G0026590) #32	Rpl34 (MGP_SPRETEiJ_G0026589) ##33	Ostc (MGP_SPRETEiJ_G0026588) #34	Etnppl (MGP_SPRETEiJ_G0026587) #35	Col25a1 (MGP_SPRETEiJ_G0026586) #36	Sec24b (MGP_SPRETEiJ_G0026585)	Mcub (MGP_SPRETEiJ_G0026584)
Steppe mouse	MODERN SPECIES	3018										ENSMSIG00000031848	Tet2 (ENSMSIG00000031845) #16	Ppa2 (ENSMSIG00000031843) #17	Arhgef38 (ENSMSIG00000031842) #19	Ints12 (ENSMSIG00000031838) #20	Gstcd (ENSMSIG00000031836) #21	Npnt (ENSMSIG00000031811) #22	Tbck (ENSMSIG00000031809) #23	Aimp1 (ENSMSIG00000031808) #24	Gimd1 (ENSMSIG00000031807) #25	Dkk2 (ENSMSIG00000031805) #26
Shrew mouse	MODERN SPECIES	17	MGP_PahariEiJ_G0027110	Manba (MGP_PahariEiJ_G0027109)	MGP_PahariEiJ_G0027108 ##8	Cisd2 (MGP_PahariEiJ_G0027107) #9	Slc9b1 (MGP_PahariEiJ_G0027106) #10	Slc9b2 (MGP_PahariEiJ_G0027105) #11	Bdh2 (MGP_PahariEiJ_G0027104) #12	Cenpe (MGP_PahariEiJ_G0027103) #13	Tacr3 (MGP_PahariEiJ_G0027102) #14	Cxxc4 (MGP_PahariEiJ_G0027101) #15	Tet2 (MGP_PahariEiJ_G0027100) #16	Ppa2 (MGP_PahariEiJ_G0027099) #17	Arhgef38 (MGP_PahariEiJ_G0027098) #19	Ints12 (MGP_PahariEiJ_G0027097) #20	Gstcd (MGP_PahariEiJ_G0027096) #21	Npnt (MGP_PahariEiJ_G0027095) #22	Tbck (MGP_PahariEiJ_G0027094) #23	Aimp1 (MGP_PahariEiJ_G0027093) #24	Gimd1 (MGP_PahariEiJ_G0027092) #25	Dkk2 (MGP_PahariEiJ_G0027091) #26	Papss1 (MGP_PahariEiJ_G0027090) #28	Sgms2 (MGP_PahariEiJ_G0027089) #29	Cyp2u1 (MGP_PahariEiJ_G0027088) #30	Hadh (MGP_PahariEiJ_G0027087) #31	Lef1 (MGP_PahariEiJ_G0027086) #32	Rpl34 (MGP_PahariEiJ_G0027085) ##33	Ostc (MGP_PahariEiJ_G0027084) #34	Etnppl (MGP_PahariEiJ_G0027083) #35	Col25a1 (MGP_PahariEiJ_G0027082) #36	Sec24b (MGP_PahariEiJ_G0027081)	Mcub (MGP_PahariEiJ_G0027080)
Rat	MODERN SPECIES	11	Manba (ENSRNOG00000052247)	Ube2d3 (ENSRNOG00000013741) ##8	Cisd2 (ENSRNOG00000048258) #9	Bdh2 (ENSRNOG00000014490) #12	Cenpe (ENSRNOG00000009339) #13	Tacr3 (ENSRNOG00000009372) #14	Cxxc4 (ENSRNOG00000045764) #15	ENSRNOG00000065234	ENSRNOG00000067100	Tet2 (ENSRNOG00000023579) #16	Gpbp1l2 (ENSRNOG00000016336)	Ppa2 (ENSRNOG00000012091) #17	Arhgef38 (ENSRNOG00000023965) #19	Ints12 (ENSRNOG00000011844) #20	Gstcd (ENSRNOG00000011669) #21	Npnt (ENSRNOG00000052873) #22	Tbck (ENSRNOG00000011454) #23	Aimp1 (ENSRNOG00000011384) #24	Gimd1 (ENSRNOG00000042721) #25	ENSRNOG00000066474	Dkk2 (ENSRNOG00000011360) #26	Papss1 (ENSRNOG00000011311) #28	Sgms2 (ENSRNOG00000011284) #29	Cyp2u1 (ENSRNOG00000011053) #30	Hadh (ENSRNOG00000010697) #31	Lef1 (ENSRNOG00000010121) #32	AABR07013412.1 (ENSRNOG00000055035)	LOC108350290 (ENSRNOG00000069431)	Rpl34 (ENSRNOG00000016387) ##33	Ostc (ENSRNOG00000023322) #34	Etnppl (ENSRNOG00000045743) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1137									Cxxc4 (ENSNGAG00000017353) #15	Tet2 (ENSNGAG00000016205) #16	Ppa2 (ENSNGAG00000006016) #17	Arhgef38 (ENSNGAG00000017312) #19	Ints12 (ENSNGAG00000015890) #20	ENSNGAG00000012050	Gstcd (ENSNGAG00000011570) #21	Npnt (ENSNGAG00000000713) #22	ENSNGAG00000014065	Tbck (ENSNGAG00000010808) #23	ENSNGAG00000007787	Gimd1 (ENSNGAG00000017371) #25	Dkk2 (ENSNGAG00000016311) #26
Lesser Egyptian jerboa	MODERN SPECIES	96	Manba (ENSJJAG00000012511)	Ube2d3 (ENSJJAG00000000457) ##8	Cisd2 (ENSJJAG00000005022) #9	ENSJJAG00000014490	Slc9b2 (ENSJJAG00000008729) #11	Bdh2 (ENSJJAG00000014275) #12	ENSJJAG00000015412	Tacr3 (ENSJJAG00000023236) #14	Cxxc4 (ENSJJAG00000011738) #15	ENSJJAG00000017297	Tet2 (ENSJJAG00000019545) #16	Ppa2 (ENSJJAG00000001408) #17	Arhgef38 (ENSJJAG00000014797) #19	ENSJJAG00000015299 #20	Gstcd (ENSJJAG00000021904) #21	Npnt (ENSJJAG00000007539) #22	ENSJJAG00000014460	Aimp1 (ENSJJAG00000016873) #24	Gimd1 (ENSJJAG00000017692) #25	Lrp12 (ENSJJAG00000020477)	Dpys (ENSJJAG00000008928)	Dcstamp (ENSJJAG00000011201)	Rims2 (ENSJJAG00000013990)	ENSJJAG00000000607	ENSJJAG00000001990	Slc25a32 (ENSJJAG00000001066)	ENSJJAG00000007630	ENSJJAG00000009949	Fzd6 (ENSJJAG00000012386)	Baalc (ENSJJAG00000016925)	Atp6v1c1 (ENSJJAG00000016526)
Kangaroo rat	MODERN SPECIES	389	Nfkb1 (ENSDORG00000007447)	Manba (ENSDORG00000006758)	Ube2d3 (ENSDORG00000028574) ##8	Cisd2 (ENSDORG00000029271) #9	Slc9b1 (ENSDORG00000023799) #10	Slc9b2 (ENSDORG00000000659) #11	Bdh2 (ENSDORG00000029728) #12	Cenpe (ENSDORG00000002271) #13	Tacr3 (ENSDORG00000010681) #14	ENSDORG00000003728 #15	Ppa2 (ENSDORG00000013455) #17	ENSDORG00000027089	Arhgef38 (ENSDORG00000029430) #19	Ints12 (ENSDORG00000023765) #20	Gstcd (ENSDORG00000009964) #21	Npnt (ENSDORG00000009968) #22	ENSDORG00000012577 #23	ENSDORG00000005018 #24	Gimd1 (ENSDORG00000026034) #25	Dkk2 (ENSDORG00000025181) #26	Papss1 (ENSDORG00000010043) #28	Sgms2 (ENSDORG00000010107) #29	Cyp2u1 (ENSDORG00000010109) #30	Hadh (ENSDORG00000015829) #31	Lef1 (ENSDORG00000007694) #32	Rpl34 (ENSDORG00000025054) ##33	Ostc (ENSDORG00000027386) #34	Etnppl (ENSDORG00000004115) #35	Col25a1 (ENSDORG00000004118) #36	ENSDORG00000024600	Sec24b (ENSDORG00000003039)
Rodentia_A	ANCESTRAL SPECIES	24	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000008294.f ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Sciuridae	ANCESTRAL SPECIES	43	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.b ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Marmotini	ANCESTRAL SPECIES	51	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714.h #30	ENSGT00940000157714.g #30	ENSGT00940000159984.e #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Marmotini_b	ANCESTRAL SPECIES	199									ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714.h #30	ENSGT00940000157714.g #30	ENSGT00940000159984.e #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33
Arctic ground squirrel	MODERN SPECIES	286															ENSUPAG00010009407 #21	NPNT (ENSUPAG00010009088) #22	TBCK (ENSUPAG00010009048) #23	AIMP1 (ENSUPAG00010009041) #24	GIMD1 (ENSUPAG00010009027) #25	DKK2 (ENSUPAG00010009013) #26	PAPSS1 (ENSUPAG00010008992) #28	SGMS2 (ENSUPAG00010008979) #29	CYP2U1 (ENSUPAG00010008973) #30	ENSUPAG00010008957 #31	LEF1 (ENSUPAG00010008645) #32	ENSUPAG00010008601 #33
Squirrel	MODERN SPECIES	414															ENSSTOG00000031612 #21	NPNT (ENSSTOG00000000885) #22	TBCK (ENSSTOG00000000893) #23	AIMP1 (ENSSTOG00000008178) #24	GIMD1 (ENSSTOG00000026704) #25	DKK2 (ENSSTOG00000020324) #26
Alpin marmot	MODERN SPECIES	14	SLC39A8 (ENSMMMG00000008612)	NFKB1 (ENSMMMG00000008676)	MANBA (ENSMMMG00000008744)	ENSMMMG00000008780 ##8	CISD2 (ENSMMMG00000008837) #9	SLC9B1 (ENSMMMG00000008845) #10	SLC9B2 (ENSMMMG00000008890) #11	BDH2 (ENSMMMG00000008917) #12	TACR3 (ENSMMMG00000008938) #14	CXXC4 (ENSMMMG00000008981) #15	TET2 (ENSMMMG00000008999) #16	PPA2 (ENSMMMG00000009033) #17	ARHGEF38 (ENSMMMG00000009110) #19	ENSMMMG00000009146 #20	GSTCD (ENSMMMG00000009168) #21	NPNT (ENSMMMG00000009207) #22	TBCK (ENSMMMG00000009872) #23	AIMP1 (ENSMMMG00000009938) #24	GIMD1 (ENSMMMG00000009944) #25	ENSMMMG00000009991	DKK2 (ENSMMMG00000010025) #26	PAPSS1 (ENSMMMG00000010079) #28	SGMS2 (ENSMMMG00000010143) #29	ENSMMMG00000010155 #30	ENSMMMG00000010161 #30	ENSMMMG00000010164 #31	LEF1 (ENSMMMG00000010193) #32	RPL34 (ENSMMMG00000010314) ##33	OSTC (ENSMMMG00000010326) #34	ETNPPL (ENSMMMG00000010343) #35	COL25A1 (ENSMMMG00000010402) #36
Eurasian red squirrel	MODERN SPECIES	18	CISD2 (ENSSVLG00005007409) #9	SLC9B1 (ENSSVLG00005007310) #10	SLC9B2 (ENSSVLG00005007129) #11	BDH2 (ENSSVLG00005007067) #12	CENPE (ENSSVLG00005006634) #13	TACR3 (ENSSVLG00005006543) #14	ENSSVLG00005006523	CXXC4 (ENSSVLG00005006498) #15	ENSSVLG00005005853	PPA2 (ENSSVLG00005005595) #17	ENSSVLG00005005487	ENSSVLG00005005442 #19	ENSSVLG00005005384 #19	ENSSVLG00005005324 #20	GSTCD (ENSSVLG00005005238) #21	NPNT (ENSSVLG00005004815) #22	TBCK (ENSSVLG00005004638) #23	AIMP1 (ENSSVLG00005004580) #24	GIMD1 (ENSSVLG00005004555) #25	DKK2 (ENSSVLG00005026018) #26	PAPSS1 (ENSSVLG00005026017) #28	SGMS2 (ENSSVLG00005026015) #29	CYP2U1 (ENSSVLG00005026014) #30	HADH (ENSSVLG00005026013) #31	ENSSVLG00005026012 #32	ENSSVLG00005026011	RPL34 (ENSSVLG00005026009) ##33	OSTC (ENSSVLG00005026008) #34	ETNPPL (ENSSVLG00005026007) #35	ENSSVLG00005026006	COL25A1 (ENSSVLG00005026005) #36
Hystricomorpha	ANCESTRAL SPECIES	38	ENSGT00940000158625.l	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b.h ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000008294.f ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Naked mole-rat female	MODERN SPECIES	19	ENSHGLG00000004201 #9	ENSHGLG00000003170 #10	ENSHGLG00000040534	SLC9B2 (ENSHGLG00000034315) #11	ENSHGLG00000000542 #12	ENSHGLG00000020122	ENSHGLG00000001051	ENSHGLG00000000800	ENSHGLG00000037331 #15	PPA2 (ENSHGLG00000001457) #17	ENSHGLG00000001427 #19	ARHGEF38 (ENSHGLG00000034470) #19	INTS12 (ENSHGLG00000002096) #20	ENSHGLG00000050195	GSTCD (ENSHGLG00000001718) #21	NPNT (ENSHGLG00000001987) #22	ENSHGLG00000034242	TBCK (ENSHGLG00000008209) #23	AIMP1 (ENSHGLG00000003860) #24	GIMD1 (ENSHGLG00000003404) #25	DKK2 (ENSHGLG00000032510) #26	ENSHGLG00000044153	PAPSS1 (ENSHGLG00000001783) #28	ENSHGLG00000038714 #30	HADH (ENSHGLG00000032988) #31	LEF1 (ENSHGLG00000046551) #32	RPL34 (ENSHGLG00000050296) ##33	ENSHGLG00000001959 #34	ENSHGLG00000004469 #35	ENSHGLG00000047113	ENPEP (ENSHGLG00000002965)
Hystricomorpha_a	ANCESTRAL SPECIES	34	ENSGT00940000158625.l	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b.h ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a	ENSGT00940000158059
Guinea pig	MODERN SPECIES	43	NFKB1 (ENSCPOG00000007789)	MANBA (ENSCPOG00000007804)	ENSCPOG00000040789 ##8	CISD2 (ENSCPOG00000037595) #9	SLC9B1 (ENSCPOG00000015650) #10	SLC9B2 (ENSCPOG00000010368) #11	BDH2 (ENSCPOG00000010376) #12	TACR3 (ENSCPOG00000010746) #14	TET2 (ENSCPOG00000005784) #16	PPA2 (ENSCPOG00000012683) #17	ENSCPOG00000023083	ENSCPOG00000024558 #19	ENSCPOG00000039865 #19	INTS12 (ENSCPOG00000009129) #20	GSTCD (ENSCPOG00000008688) #21	NPNT (ENSCPOG00000006697) #22	TBCK (ENSCPOG00000006708) #23	AIMP1 (ENSCPOG00000006734) #24	DKK2 (ENSCPOG00000030616) #26	PAPSS1 (ENSCPOG00000011505) #28	SGMS2 (ENSCPOG00000032233) #29	CYP2U1 (ENSCPOG00000011750) #30	HADH (ENSCPOG00000024229) #31	LEF1 (ENSCPOG00000013758) #32	ENSCPOG00000037181 #33	OSTC (ENSCPOG00000039456) #34	ETNPPL (ENSCPOG00000015368) #35	COL25A1 (ENSCPOG00000012595) #36	SEC24B (ENSCPOG00000009212)	ENSCPOG00000022594	ENSCPOG00000002110
Hystricomorpha_b	ANCESTRAL SPECIES	52	ENSGT00940000158625.l	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.b.h ##8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000153745.b #14	ENSGT00940000154108.b.a.a #15	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.e.b.a.a #33	ENSGT00390000008294.f ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00950000182924.B.a.a
Long-tailed chinchilla	MODERN SPECIES	203	NFKB1 (ENSCLAG00000002329)	MANBA (ENSCLAG00000002028)	ENSCLAG00000001951 ##8	CISD2 (ENSCLAG00000001906) #9	SLC9B1 (ENSCLAG00000001893) #10	SLC9B2 (ENSCLAG00000001811) #11	BDH2 (ENSCLAG00000007330) #12	CENPE (ENSCLAG00000006287) #13	TACR3 (ENSCLAG00000005677) #14	ENSCLAG00000005638 #15	TET2 (ENSCLAG00000005412) #16	PPA2 (ENSCLAG00000004964) #17	ARHGEF38 (ENSCLAG00000003103) #19	INTS12 (ENSCLAG00000003066) #20	GSTCD (ENSCLAG00000002751) #21	NPNT (ENSCLAG00000002301) #22	TBCK (ENSCLAG00000004392) #23	AIMP1 (ENSCLAG00000003954) #24	GIMD1 (ENSCLAG00000003485) #25	DKK2 (ENSCLAG00000002881) #26	PAPSS1 (ENSCLAG00000002840) #28	SGMS2 (ENSCLAG00000002723) #29	CYP2U1 (ENSCLAG00000002674) #30	HADH (ENSCLAG00000003966) #31	LEF1 (ENSCLAG00000003044) #32	ENSCLAG00000003911 #33	OSTC (ENSCLAG00000003790) #34	ETNPPL (ENSCLAG00000002982) #35	COL25A1 (ENSCLAG00000002719) #36	ENSCLAG00000002421	SEC24B (ENSCLAG00000004027)
Degu	MODERN SPECIES	57						ENSODEG00000011668 #15	ENSODEG00000011599	TET2 (ENSODEG00000011623) #16	PPA2 (ENSODEG00000012171) #17	ENSODEG00000012068	ENSODEG00000011526	ENSODEG00000010989 #19	ENSODEG00000011418 #19	INTS12 (ENSODEG00000010716) #20	GSTCD (ENSODEG00000011298) #21	NPNT (ENSODEG00000012616) #22	ENSODEG00000011791	ENSODEG00000010617 #24	GIMD1 (ENSODEG00000011081) #25	DKK2 (ENSODEG00000013005) #26	PAPSS1 (ENSODEG00000012464) #28	SGMS2 (ENSODEG00000010387) #29	CYP2U1 (ENSODEG00000010344) #30	HADH (ENSODEG00000011168) #31	LEF1 (ENSODEG00000010436) #32	ENSODEG00000019987	ENSODEG00000012716 ##33	OSTC (ENSODEG00000011874) #34	ETNPPL (ENSODEG00000011007) #35	COL25A1 (ENSODEG00000011565) #36	ENSODEG00000011204
Lagomorpha	ANCESTRAL SPECIES	45	ENSGT00390000008787.a	ENSGT00940000158926	ENSGT00940000158625	ENSGT00390000001670	ENSGT00940000153169.A.b.b.a.a.b #8	ENSGT00940000156660 #9	ENSGT00390000013285.b #10	ENSGT00390000013285.a #11	ENSGT00940000156721 #12	ENSGT00940000160597 #13	ENSGT00940000160003 #16	ENSGT00390000017004.a.a #17	ENSGT00950000183088.a.b.b #19	ENSGT00390000005218 #20	ENSGT00390000004446 #21	ENSGT00930000150973.B #22	ENSGT00940000158244 #23	ENSGT00940000154950 #24	ENSGT00530000069080 #25	ENSGT00940000162188 #26	ENSGT00390000009613.b #28	ENSGT00940000157370 #29	ENSGT00940000157714 #30	ENSGT00940000159984 #31	ENSGT00940000159660 #32	ENSGT00390000008294.f ##33	ENSGT00390000001376 #34	ENSGT00940000157910 #35	ENSGT00940000159823 #36	ENSGT00940000158059	ENSGT00940000155140
Rabbit	MODERN SPECIES	6	CENPE (ENSOCUG00000000699) #13	ENSOCUG00000031712	ENSOCUG00000037044	ENSOCUG00000023919	TACR3 (ENSOCUG00000009581) #14	ENSOCUG00000015536 ##15	ENSOCUG00000034203	ENSOCUG00000037821	ENSOCUG00000026448	ENSOCUG00000021908	TET2 (ENSOCUG00000007098) #16	PPA2 (ENSOCUG00000005941) #17	ARHGEF38 (ENSOCUG00000027996) #19	INTS12 (ENSOCUG00000011321) #20	GSTCD (ENSOCUG00000003884) #21	NPNT (ENSOCUG00000012530) #22	ENSOCUG00000032155	TBCK (ENSOCUG00000008514) #23	AIMP1 (ENSOCUG00000002043) #24	GIMD1 (ENSOCUG00000026543) #25	DKK2 (ENSOCUG00000001765) #26	PAPSS1 (ENSOCUG00000004622) #28	SGMS2 (ENSOCUG00000009998) #29	CYP2U1 (ENSOCUG00000002281) #30	HADH (ENSOCUG00000014271) #31	LEF1 (ENSOCUG00000010436) #32	ENSOCUG00000024066	ENSOCUG00000021006	ENSOCUG00000029357 ##33	ENSOCUG00000011056 #34	ETNPPL (ENSOCUG00000015610) #35
Pika	MODERN SPECIES	1602													ENSOPRG00000001123 #19	INTS12 (ENSOPRG00000001128) #20	GSTCD (ENSOPRG00000001142) #21	NPNT (ENSOPRG00000001171) #22