Sarcopterygii	ANCESTRAL SPECIES	13	ENSGT00940000157052	ENSGT00940000165188	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702 #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Tetrapoda	ANCESTRAL SPECIES	17	ENSGT00940000156955	ENSGT00940000155157	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702 #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Amniota	ANCESTRAL SPECIES	10	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Mammalia	ANCESTRAL SPECIES	14	ENSGT00940000157052	ENSGT00940000165188	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32
Theria	ANCESTRAL SPECIES	26	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32
Eutheria	ANCESTRAL SPECIES	13	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000166688 #17	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000166688 #17	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431.g #24	ENSGT00730000111063 #25	ENSGT00390000000403 #26	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33	ENSGT00390000017460 #35
Arabian camel	MODERN SPECIES	2	NSMCE4A (ENSCDRG00005013236) #7	ENSCDRG00005013283 #8	ATE1 (ENSCDRG00005013374) #9	FGFR2 (ENSCDRG00005014046) #10	ENSCDRG00005014853 #11	WDR11 (ENSCDRG00005014918) #12	PLPP4 (ENSCDRG00005015079) #13	SEC23IP (ENSCDRG00005015175) #14	MCMBP (ENSCDRG00005015289) #15	INPP5F (ENSCDRG00005015415) #16	ENSCDRG00005015966 #17	BAG3 (ENSCDRG00005016010) #18	TIAL1 (ENSCDRG00005016058) #19	RGS10 (ENSCDRG00005016243) #20	GRK5 (ENSCDRG00005016297) #21	PRDX3 (ENSCDRG00005016447) #22	SFXN4 (ENSCDRG00005016498) #23	DENND10 (ENSCDRG00005016616) #24	EIF3A (ENSCDRG00005016694) #25	CACUL1 (ENSCDRG00005016843) #26	FAM204A (ENSCDRG00005016877) #27	RAB11FIP2 (ENSCDRG00005016920) #28	EMX2 (ENSCDRG00005016940) #29	PDZD8 (ENSCDRG00005016959) #30	SLC18A2 (ENSCDRG00005016999) #31	KCNK18 (ENSCDRG00005017056) #32	HSPA12A (ENSCDRG00005017219) #33	ENO4 (ENSCDRG00005018500) #34	C10orf82 (ENSCDRG00005018543) #35	PNLIPRP2 (ENSCDRG00005018619) #36	ENSCDRG00005018686 #37
Alpaca	MODERN SPECIES	85																PRDX3 (ENSVPAG00000004893) #22	ENSVPAG00000004892 #23	ENSVPAG00000004890 #24
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000166688 #17	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Cetacea	ANCESTRAL SPECIES	15	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000166688.a #17	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000009110.`b.a	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000156234.f.b	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000166688.a #17	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000009110.`b.a	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00950000182802.A.ab.a.b	ENSGT00940000156234.f.b	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000166688.a #17	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00950000182802.A.ab.a.b	ENSGT00940000156234.f.b	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Odontoceti_b	DUPLICATION
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000166688.a #17	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.i #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00940000165624	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00950000182802.A.ab.a.b	ENSGT00940000156234.f.b	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000166688.a #17	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.i #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00940000165624	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00950000182802.A.ab.a.b	ENSGT00940000156234.f.b	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000161152
Narwhal	MODERN SPECIES	311	ENSMMNG00015021035	NSMCE4A (ENSMMNG00015020951) #7	ATE1 (ENSMMNG00015020901) #9	FGFR2 (ENSMMNG00015020685) #10	WDR11 (ENSMMNG00015020551) #12	PLPP4 (ENSMMNG00015020521) #13	SEC23IP (ENSMMNG00015020467) #14	ENSMMNG00015020452	MCMBP (ENSMMNG00015020433) #15	ENSMMNG00015020417 #17	INPP5F (ENSMMNG00015020349) #16	BAG3 (ENSMMNG00015020314) #18	TIAL1 (ENSMMNG00015020292) #19	RGS10 (ENSMMNG00015020257) #20	GRK5 (ENSMMNG00015020199) #21	ENSMMNG00015020153 #22	SFXN4 (ENSMMNG00015020102) #23	DENND10 (ENSMMNG00015020070) #24	EIF3A (ENSMMNG00015019996) #25	NANOS1 (ENSMMNG00015019960)	ENSMMNG00015019942	CACUL1 (ENSMMNG00015019910) #26	PRLHR (ENSMMNG00015019892)	ENSMMNG00015019868 #27	RAB11FIP2 (ENSMMNG00015019844) #28	EMX2 (ENSMMNG00015019818) #29	ENSMMNG00015019806	ENSMMNG00015019793	PDZD8 (ENSMMNG00015019756) #30	SLC18A2 (ENSMMNG00015019729) #31	VAX1 (ENSMMNG00015019670)
Beluga whale	MODERN SPECIES	65	ENSDLEG00000019858	NSMCE4A (ENSDLEG00000007929) #7	ATE1 (ENSDLEG00000007967) #9	FGFR2 (ENSDLEG00000008001) #10	WDR11 (ENSDLEG00000008040) #12	PLPP4 (ENSDLEG00000008083) #13	SEC23IP (ENSDLEG00000008126) #14	MCMBP (ENSDLEG00000008221) #15	ENSDLEG00000008284	INPP5F (ENSDLEG00000008316) #16	ENSDLEG00000008409 #17	BAG3 (ENSDLEG00000008440) #18	TIAL1 (ENSDLEG00000008473) #19	RGS10 (ENSDLEG00000008548) #20	GRK5 (ENSDLEG00000008572) #21	ENSDLEG00000008666 #22	SFXN4 (ENSDLEG00000008691) #23	DENND10 (ENSDLEG00000008728) #24	EIF3A (ENSDLEG00000008753) #25	NANOS1 (ENSDLEG00000008833)	ENSDLEG00000008849	CACUL1 (ENSDLEG00000008882) #26	PRLHR (ENSDLEG00000008918)	FAM204A (ENSDLEG00000008925) #27	RAB11FIP2 (ENSDLEG00000008945) #28	EMX2 (ENSDLEG00000008964) #29	PDZD8 (ENSDLEG00000008990) #30	ENSDLEG00000009049	ENSDLEG00000009071	SLC18A2 (ENSDLEG00000009094) #31	VAX1 (ENSDLEG00000009134)
Vaquita	MODERN SPECIES	7	ENSPSNG00000022440	ENSPSNG00000022404	NSMCE4A (ENSPSNG00000022375) #7	ATE1 (ENSPSNG00000022367) #9	FGFR2 (ENSPSNG00000022313) #10	WDR11 (ENSPSNG00000022247) #12	PLPP4 (ENSPSNG00000022236) #13	SEC23IP (ENSPSNG00000022208) #14	MCMBP (ENSPSNG00000022194) #15	ENSPSNG00000022181 #17	INPP5F (ENSPSNG00000022147) #16	BAG3 (ENSPSNG00000022114) #18	TIAL1 (ENSPSNG00000022095) #19	RGS10 (ENSPSNG00000022064) #20	GRK5 (ENSPSNG00000022025) #21	ENSPSNG00000022004 #22	SFXN4 (ENSPSNG00000021957) #23	DENND10 (ENSPSNG00000021921) #24	EIF3A (ENSPSNG00000021873) #25	ENSPSNG00000021843	CACUL1 (ENSPSNG00000021830) #26	FAM204A (ENSPSNG00000021811) #27	RAB11FIP2 (ENSPSNG00000021793) #28	EMX2 (ENSPSNG00000021772) #29	ENSPSNG00000021725	PDZD8 (ENSPSNG00000021707) #30	SLC18A2 (ENSPSNG00000021681) #31	KCNK18 (ENSPSNG00000021654) #32	VAX1 (ENSPSNG00000021629)	SHTN1 (ENSPSNG00000021566)	ENO4 (ENSPSNG00000021427) #34
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000159033	ENSGT00940000156904	ENSGT00510000049460	ENSGT00940000159873	ENSGT00390000005023.a	ENSGT01030000234816	ENSGT01090000259985.b.b.b.a.a.a	ENSGT00390000001745	ENSGT00390000017213.A	ENSGT00940000159164	ENSGT01000000214413.b.a.b.a	ENSGT00390000017343	ENSGT00940000156036	ENSGT00390000013354.d.b	ENSGT01030000234629.A	ENSGT00940000153430.a.b.j #22	ENSGT00940000159748	ENSGT00950000182805.a.a.b.a ##34	ENSGT00940000153615.a.b	ENSGT00390000005242	ENSGT00940000159480	ENSGT00950000183070.a.a	ENSGT00390000000305	ENSGT01030000234564.b	ENSGT00940000157473	ENSGT00940000158621	ENSGT00940000162495	ENSGT00940000162526	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00940000155987.b
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000159033	ENSGT00940000156904	ENSGT00510000049460	ENSGT00940000159873	ENSGT00390000005023.a	ENSGT01030000234816	ENSGT01090000259985.b.b.b.a.a.a	ENSGT00390000001745	ENSGT00390000017213.A	ENSGT00940000159164	ENSGT01000000214413.b.a.b.a	ENSGT00390000017343	ENSGT00940000156036	ENSGT00390000013354.d.b	ENSGT01030000234629.A	ENSGT00940000153430.a.b.j #22	ENSGT00940000159748	ENSGT00950000182805.a.a.b.a ##34	ENSGT00940000153615.a.b	ENSGT00390000005242	ENSGT00940000159480	ENSGT00950000183070.a.a	ENSGT00390000000305	ENSGT01030000234564.b	ENSGT00940000157473	ENSGT00940000158621	ENSGT00940000162495	ENSGT00940000162526	ENSGT00950000183086.a.b	ENSGT00940000156605	ENSGT00940000155987.b
Narwhal	MODERN SPECIES	313	ING4 (ENSMMNG00015015173)	ZNF384 (ENSMMNG00015015269)	PIANP (ENSMMNG00015015305)	COPS7A (ENSMMNG00015015318)	MLF2 (ENSMMNG00015015337)	PTMS (ENSMMNG00015015353)	LAG3 (ENSMMNG00015015366)	CD4 (ENSMMNG00015015391)	GPR162 (ENSMMNG00015015414)	P3H3 (ENSMMNG00015015434)	GNB3 (ENSMMNG00015015448)	CDCA3 (ENSMMNG00015015481)	USP5 (ENSMMNG00015015510)	TPI1 (ENSMMNG00015015764)	SPSB2 (ENSMMNG00015015797)	ENSMMNG00015015832 #22	LRRC23 (ENSMMNG00015015931)	ENO2 (ENSMMNG00015016116) ##34	ATN1 (ENSMMNG00015016194)	C12orf57 (ENSMMNG00015016278)	PTPN6 (ENSMMNG00015016375)	PHB2 (ENSMMNG00015016550)	EMG1 (ENSMMNG00015016611)	LPCAT3 (ENSMMNG00015016648)	C1S (ENSMMNG00015016694)	C1R (ENSMMNG00015016776)	C1RL (ENSMMNG00015016894)	ENSMMNG00015016913	CLSTN3 (ENSMMNG00015016951)	PEX5 (ENSMMNG00015016996)	CD163 (ENSMMNG00015017218)
Beluga whale	MODERN SPECIES	23	ZNF384 (ENSDLEG00000015249)	PIANP (ENSDLEG00000015302)	COPS7A (ENSDLEG00000015324)	MLF2 (ENSDLEG00000015348)	LAG3 (ENSDLEG00000015366)	CD4 (ENSDLEG00000015440)	GPR162 (ENSDLEG00000015459)	P3H3 (ENSDLEG00000015481)	ENSDLEG00000015588	ENSDLEG00000015552	ENSDLEG00000015607	ENSDLEG00000015616	USP5 (ENSDLEG00000015635)	TPI1 (ENSDLEG00000015660)	SPSB2 (ENSDLEG00000015683)	ENSDLEG00000015696 #22	LRRC23 (ENSDLEG00000015705)	ENO2 (ENSDLEG00000015736) ##34	ATN1 (ENSDLEG00000015753)	CUNH12orf57 (ENSDLEG00000015776)	PTPN6 (ENSDLEG00000015801)	ENSDLEG00000015827	EMG1 (ENSDLEG00000015851)	LPCAT3 (ENSDLEG00000015866)	C1S (ENSDLEG00000015889)	C1R (ENSDLEG00000015916)	C1RL (ENSDLEG00000015962)	CLSTN3 (ENSDLEG00000015994)	PEX5 (ENSDLEG00000016025)	CD163 (ENSDLEG00000016084)	CLEC4E (ENSDLEG00000016164)
Vaquita	MODERN SPECIES	1	ING4 (ENSPSNG00000005989)	ZNF384 (ENSPSNG00000005851)	PIANP (ENSPSNG00000005778)	COPS7A (ENSPSNG00000005746)	MLF2 (ENSPSNG00000005707)	PTMS (ENSPSNG00000005689)	LAG3 (ENSPSNG00000005663)	CD4 (ENSPSNG00000005617)	GPR162 (ENSPSNG00000005573)	P3H3 (ENSPSNG00000005493)	GNB3 (ENSPSNG00000005442)	ENSPSNG00000005389	USP5 (ENSPSNG00000005317)	TPI1 (ENSPSNG00000005263)	SPSB2 (ENSPSNG00000005239)	ENSPSNG00000005219 #22	LRRC23 (ENSPSNG00000005175)	ENO2 (ENSPSNG00000005075) ##34	ATN1 (ENSPSNG00000005006)	C12orf57 (ENSPSNG00000004951)	PTPN6 (ENSPSNG00000004895)	PHB2 (ENSPSNG00000004823)	EMG1 (ENSPSNG00000004766)	LPCAT3 (ENSPSNG00000004738)	C1S (ENSPSNG00000004705)	C1R (ENSPSNG00000004652)	C1RL (ENSPSNG00000004616)	ENSPSNG00000004595	CLSTN3 (ENSPSNG00000004552)	PEX5 (ENSPSNG00000004416)	CD163 (ENSPSNG00000004288)
Dolphin	MODERN SPECIES	5895																PRDX3 (ENSTTRG00000010878) #22
Sperm whale	MODERN SPECIES	688																PRDX3 (ENSPCTG00005016231) #22	ENSPCTG00005016193 #23
Blue whale	MODERN SPECIES	7	ENSBMSG00010015526	NSMCE4A (ENSBMSG00010017199) #7	ATE1 (ENSBMSG00010017265) #9	FGFR2 (ENSBMSG00010012623) #10	WDR11 (ENSBMSG00010012814) #12	PLPP4 (ENSBMSG00010012851) #13	SEC23IP (ENSBMSG00010012870) #14	MCMBP (ENSBMSG00010012893) #15	ENSBMSG00010012916	INPP5F (ENSBMSG00010012966) #16	ENSBMSG00010012993 #17	BAG3 (ENSBMSG00010013012) #18	TIAL1 (ENSBMSG00010013032) #19	RGS10 (ENSBMSG00010013065) #20	GRK5 (ENSBMSG00010013213) #21	PRDX3 (ENSBMSG00010013313) #22	ENSBMSG00010013351 #23	DENND10 (ENSBMSG00010013398) #24	EIF3A (ENSBMSG00010013423) #25	NANOS1 (ENSBMSG00010013472)	ENSBMSG00010013481	ENSBMSG00010013493	CACUL1 (ENSBMSG00010013512) #26	PRLHR (ENSBMSG00010013527)	FAM204A (ENSBMSG00010013538) #27	RAB11FIP2 (ENSBMSG00010013550) #28	EMX2 (ENSBMSG00010013561) #29	ENSBMSG00010013570	PDZD8 (ENSBMSG00010013584) #30	ENSBMSG00010013682	SLC18A2 (ENSBMSG00010013731) #31
Pecora	ANCESTRAL SPECIES	12	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000169826	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000166688 #17	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000169826	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Bovidae	ANCESTRAL SPECIES	24	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000169826	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Caprinae	ANCESTRAL SPECIES	19	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068.o #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Rambouillet Sheep	MODERN SPECIES	14	ENSOARG00020019110	FGFR2 (ENSOARG00020018761) #10	ENSOARG00020018691	WDR11 (ENSOARG00020018347) #12	PLPP4 (ENSOARG00020018154) #13	ENSOARG00020018072	ENSOARG00020018045	SEC23IP (ENSOARG00020017426) #14	MCMBP (ENSOARG00020017074) #15	INPP5F (ENSOARG00020014985) #16	BAG3 (ENSOARG00020014869) #18	TIAL1 (ENSOARG00020014734) #19	RGS10 (ENSOARG00020014603) #20	ENSOARG00020014577	GRK5 (ENSOARG00020014464) #21	PRDX3 (ENSOARG00020014412) #22	SFXN4 (ENSOARG00020014267) #23	DENND10 (ENSOARG00020013992) #24	ENSOARG00020013945	EIF3A (ENSOARG00020013670) #25	NANOS1 (ENSOARG00020025516)	CACUL1 (ENSOARG00020025506) #26	PRLHR (ENSOARG00020025500)	FAM204A (ENSOARG00020025494) #27	RAB11FIP2 (ENSOARG00020025481) #28	EMX2 (ENSOARG00020025474) #29	PDZD8 (ENSOARG00020025466) #30	SLC18A2 (ENSOARG00020025447) #31	KCNK18 (ENSOARG00020025440) #32	VAX1 (ENSOARG00020025434)	SHTN1 (ENSOARG00020025278)
Goat	MODERN SPECIES	18	BTBD16 (ENSCHIG00000021282)	TACC2 (ENSCHIG00000013177)	NSMCE4A (ENSCHIG00000015022) #7	ATE1 (ENSCHIG00000011980) #9	FGFR2 (ENSCHIG00000017963) #10	ENSCHIG00000003717 #12	PLPP4 (ENSCHIG00000013810) #13	ENSCHIG00000016797	SEC23IP (ENSCHIG00000014446) #14	MCMBP (ENSCHIG00000016174) #15	INPP5F (ENSCHIG00000013653) #16	BAG3 (ENSCHIG00000019195) #18	TIAL1 (ENSCHIG00000020810) #19	RGS10 (ENSCHIG00000011045) #20	GRK5 (ENSCHIG00000003897) #21	PRDX3 (ENSCHIG00000018632) #22	SFXN4 (ENSCHIG00000011807) #23	DENND10 (ENSCHIG00000020782) #24	EIF3A (ENSCHIG00000016597) #25	NANOS1 (ENSCHIG00000004298)	CACUL1 (ENSCHIG00000012763) #26	PRLHR (ENSCHIG00000010388)	FAM204A (ENSCHIG00000022183) #27	RAB11FIP2 (ENSCHIG00000014924) #28	EMX2 (ENSCHIG00000023641) #29	PDZD8 (ENSCHIG00000014429) #30	SLC18A2 (ENSCHIG00000024050) #31	KCNK18 (ENSCHIG00000013853) #32	VAX1 (ENSCHIG00000001536)	SHTN1 (ENSCHIG00000001689)	ENO4 (ENSCHIG00000019329) #34
Bovinae	ANCESTRAL SPECIES	22	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000169826	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00960000193053	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Bos	ANCESTRAL SPECIES	23	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000169826	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Bos_a	ANCESTRAL SPECIES	17	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Wild yak	MODERN SPECIES	1461													TIAL1 (ENSBMUG00000007342) #19	RGS10 (ENSBMUG00000007300) #20	GRK5 (ENSBMUG00000006596) #21	PRDX3 (ENSBMUG00000006396) #22	SFXN4 (ENSBMUG00000006382) #23	DENND10 (ENSBMUG00000006357) #24	EIF3A (ENSBMUG00000006312) #25	CACUL1 (ENSBMUG00000006288) #26	PRLHR (ENSBMUG00000006267)	FAM204A (ENSBMUG00000006264) #27	RAB11FIP2 (ENSBMUG00000006253) #28
Domestic yak	MODERN SPECIES	17	BTBD16 (ENSBGRG00000024940)	ENSBGRG00000024000	NSMCE4A (ENSBGRG00000023734) #7	ATE1 (ENSBGRG00000023442) #9	FGFR2 (ENSBGRG00000023230) #10	WDR11 (ENSBGRG00000023025) #12	ENSBGRG00000022938 #13	SEC23IP (ENSBGRG00000022602) #14	ENSBGRG00000022579	MCMBP (ENSBGRG00000022255) #15	INPP5F (ENSBGRG00000021737) #16	BAG3 (ENSBGRG00000021665) #18	TIAL1 (ENSBGRG00000021417) #19	RGS10 (ENSBGRG00000021293) #20	GRK5 (ENSBGRG00000020547) #21	PRDX3 (ENSBGRG00000020425) #22	SFXN4 (ENSBGRG00000020303) #23	DENND10 (ENSBGRG00000020185) #24	EIF3A (ENSBGRG00000019771) #25	NANOS1 (ENSBGRG00000019738)	CACUL1 (ENSBGRG00000019540) #26	PRLHR (ENSBGRG00000019512)	FAM204A (ENSBGRG00000019441) #27	RAB11FIP2 (ENSBGRG00000019403) #28	ENSBGRG00000019389	EMX2 (ENSBGRG00000019351) #29	PDZD8 (ENSBGRG00000019307) #30	SLC18A2 (ENSBGRG00000019173) #31	KCNK18 (ENSBGRG00000019135) #32	VAX1 (ENSBGRG00000019107)	SHTN1 (ENSBGRG00000018522)
Bos_b	ANCESTRAL SPECIES	23	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000169826	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.b.a.b.b	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Cow	MODERN SPECIES	18	TACC2 (ENSBTAG00000010786)	NSMCE4A (ENSBTAG00000019166) #7	ATE1 (ENSBTAG00000003178) #9	FGFR2 (ENSBTAG00000014064) #10	WDR11 (ENSBTAG00000021540) #12	ENSBTAG00000049781	PLPP4 (ENSBTAG00000032106) #13	SEC23IP (ENSBTAG00000007441) #14	ENSBTAG00000048455	MCMBP (ENSBTAG00000009877) #15	INPP5F (ENSBTAG00000021801) #16	BAG3 (ENSBTAG00000013641) #18	TIAL1 (ENSBTAG00000004080) #19	RGS10 (ENSBTAG00000002647) #20	GRK5 (ENSBTAG00000007981) #21	PRDX3 (ENSBTAG00000008731) #22	SFXN4 (ENSBTAG00000008730) #23	DENND10 (ENSBTAG00000008729) #24	EIF3A (ENSBTAG00000002528) #25	NANOS1 (ENSBTAG00000052883)	CACUL1 (ENSBTAG00000022808) #26	PRLHR (ENSBTAG00000047842)	FAM204A (ENSBTAG00000005057) #27	RAB11FIP2 (ENSBTAG00000007460) #28	EMX2 (ENSBTAG00000003027) #29	PDZD8 (ENSBTAG00000011401) #30	SLC18A2 (ENSBTAG00000004739) #31	KCNK18 (ENSBTAG00000015062) #32	VAX1 (ENSBTAG00000013875)	SHTN1 (ENSBTAG00000007578)	ENO4 (ENSBTAG00000004330) #34
Hybrid Bos Indicus	MODERN SPECIES	18	PLEKHA1 (ENSBIXG00005021579)	BTBD16 (ENSBIXG00005003629)	TACC2 (ENSBIXG00005003615)	NSMCE4A (ENSBIXG00005021235) #7	ATE1 (ENSBIXG00005021194) #9	FGFR2 (ENSBIXG00005003546) #10	WDR11 (ENSBIXG00005003481) #12	PLPP4 (ENSBIXG00005020504) #13	SEC23IP (ENSBIXG00005003449) #14	MCMBP (ENSBIXG00005020337) #15	INPP5F (ENSBIXG00005020287) #16	BAG3 (ENSBIXG00005020191) #18	TIAL1 (ENSBIXG00005003333) #19	RGS10 (ENSBIXG00005020105) #20	GRK5 (ENSBIXG00005020062) #21	PRDX3 (ENSBIXG00005020003) #22	SFXN4 (ENSBIXG00005019982) #23	DENND10 (ENSBIXG00005019929) #24	EIF3A (ENSBIXG00005019889) #25	NANOS1 (ENSBIXG00005019834)	CACUL1 (ENSBIXG00005019793) #26	FAM204A (ENSBIXG00005019733) #27	RAB11FIP2 (ENSBIXG00005003218) #28	EMX2 (ENSBIXG00005019671) #29	PDZD8 (ENSBIXG00005019643) #30	SLC18A2 (ENSBIXG00005019615) #31	KCNK18 (ENSBIXG00005006609) #32	VAX1 (ENSBIXG00005019565)	SHTN1 (ENSBIXG00005019502)	ENO4 (ENSBIXG00005019425) #34	HSPA12A (ENSBIXG00005019246) #33
American bison	MODERN SPECIES	3316	ENSBBBG00000010608	NSMCE4A (ENSBBBG00000010442) #7	ENSBBBG00000010432 #8	ATE1 (ENSBBBG00000010422) #9	FGFR2 (ENSBBBG00000010374) #10	WDR11 (ENSBBBG00000010323) #12	PLPP4 (ENSBBBG00000010305) #13	SEC23IP (ENSBBBG00000010295) #14	ENSBBBG00000010282	MCMBP (ENSBBBG00000010269) #15	INPP5F (ENSBBBG00000000062) #16	BAG3 (ENSBBBG00000010215) #18	TIAL1 (ENSBBBG00000010202) #19	RGS10 (ENSBBBG00000010192) #20	GRK5 (ENSBBBG00000010180) #21	PRDX3 (ENSBBBG00000007205) #22	SFXN4 (ENSBBBG00000010140) #23	DENND10 (ENSBBBG00000010129) #24	EIF3A (ENSBBBG00000010118) #25	CACUL1 (ENSBBBG00000010099) #26	PRLHR (ENSBBBG00000010095)	FAM204A (ENSBBBG00000010092) #27	RAB11FIP2 (ENSBBBG00000001707) #28	PDZD8 (ENSBBBG00000010080) #30	SLC18A2 (ENSBBBG00000010077) #31	KCNK18 (ENSBBBG00000010068) #32	VAX1 (ENSBBBG00000010067)	SHTN1 (ENSBBBG00000010058)	ENO4 (ENSBBBG00000001697) #34	HSPA12A (ENSBBBG00000001683) #33	C10orf82 (ENSBBBG00000001667) #35
Siberian musk deer	MODERN SPECIES	1161	NSMCE4A (ENSMMSG00000015672) #7	ATE1 (ENSMMSG00000015713) #9	FGFR2 (ENSMMSG00000016023) #10	WDR11 (ENSMMSG00000016506) #12	PLPP4 (ENSMMSG00000016645) #13	ENSMMSG00000016717	ENSMMSG00000016738	SEC23IP (ENSMMSG00000016779) #14	MCMBP (ENSMMSG00000016915) #15	INPP5F (ENSMMSG00000016998) #16	BAG3 (ENSMMSG00000017210) #18	ENSMMSG00000017248 #19	RGS10 (ENSMMSG00000017368) #20	GRK5 (ENSMMSG00000017460) #21	ENSMMSG00000017543	PRDX3 (ENSMMSG00000017559) #22	SFXN4 (ENSMMSG00000017594) #23	DENND10 (ENSMMSG00000017673) #24	EIF3A (ENSMMSG00000017725) #25	NANOS1 (ENSMMSG00000017830)	ENSMMSG00000017843	CACUL1 (ENSMMSG00000017863) #26	PRLHR (ENSMMSG00000017899)	ENSMMSG00000017914 #27	RAB11FIP2 (ENSMMSG00000017974) #28	EMX2 (ENSMMSG00000018013) #29	PDZD8 (ENSMMSG00000018042) #30	SLC18A2 (ENSMMSG00000018068) #31	KCNK18 (ENSMMSG00000018163) #32	VAX1 (ENSMMSG00000018189)	SHTN1 (ENSMMSG00000018262)
Yarkand deer	MODERN SPECIES	6	NSMCE4A (ENSCHYG00000010654) #7	ENSCHYG00000010624 #8	ATE1 (ENSCHYG00000010156) #9	FGFR2 (ENSCHYG00000008730) #10	WDR11 (ENSCHYG00000008551) #12	ENSCHYG00000008531	PLPP4 (ENSCHYG00000008482) #13	SEC23IP (ENSCHYG00000008365) #14	MCMBP (ENSCHYG00000008251) #15	ENSCHYG00000008228 #17	INPP5F (ENSCHYG00000008007) #16	BAG3 (ENSCHYG00000007937) #18	TIAL1 (ENSCHYG00000007795) #19	RGS10 (ENSCHYG00000007690) #20	GRK5 (ENSCHYG00000007383) #21	PRDX3 (ENSCHYG00000007298) #22	SFXN4 (ENSCHYG00000007221) #23	DENND10 (ENSCHYG00000007162) #24	ENSCHYG00000007151	EIF3A (ENSCHYG00000007026) #25	NANOS1 (ENSCHYG00000007001)	CACUL1 (ENSCHYG00000006987) #26	PRLHR (ENSCHYG00000020940)	FAM204A (ENSCHYG00000020842) #27	RAB11FIP2 (ENSCHYG00000020785) #28	EMX2 (ENSCHYG00000020758) #29	PDZD8 (ENSCHYG00000020597) #30	SLC18A2 (ENSCHYG00000020488) #31	KCNK18 (ENSCHYG00000020450) #32	ENSCHYG00000020376	SHTN1 (ENSCHYG00000020033)
Suina	ANCESTRAL SPECIES	6	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746.a #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Chacoan peccary	MODERN SPECIES	955	BTBD16 (ENSCWAG00000010937)	ENSCWAG00000011139	NSMCE4A (ENSCWAG00000013284) #7	ATE1 (ENSCWAG00000013413) #9	FGFR2 (ENSCWAG00000013844) #10	WDR11 (ENSCWAG00000017961) #12	ENSCWAG00000017992	PLPP4 (ENSCWAG00000018014) #13	SEC23IP (ENSCWAG00000018097) #14	MCMBP (ENSCWAG00000018167) #15	INPP5F (ENSCWAG00000018266) #16	BAG3 (ENSCWAG00000018369) #18	TIAL1 (ENSCWAG00000018390) #19	RGS10 (ENSCWAG00000018430) #20	GRK5 (ENSCWAG00000018519) #21	PRDX3 (ENSCWAG00000018552) #22	SFXN4 (ENSCWAG00000018584) #23	DENND10 (ENSCWAG00000018618) #24	EIF3A (ENSCWAG00000018666) #25	NANOS1 (ENSCWAG00000018760)	CACUL1 (ENSCWAG00000018778) #26	PRLHR (ENSCWAG00000018814)	FAM204A (ENSCWAG00000018824) #27	RAB11FIP2 (ENSCWAG00000018850) #28	EMX2 (ENSCWAG00000018865) #29	ENSCWAG00000018881	PDZD8 (ENSCWAG00000018891) #30	SLC18A2 (ENSCWAG00000018909) #31	KCNK18 (ENSCWAG00000018968) #32	VAX1 (ENSCWAG00000018985)	SHTN1 (ENSCWAG00000019029)
Pig	MODERN SPECIES	5	NSMCE4A (ENSSSCG00000010700) #7	ENSSSCG00000057767	ATE1 (ENSSSCG00000010699) #9	FGFR2 (ENSSSCG00000010698) #10	ENSSSCG00000041462	WDR11 (ENSSSCG00000010692) #12	PLPP4 (ENSSSCG00000010691) #13	SEC23IP (ENSSSCG00000010690) #14	ENSSSCG00000056743	MCMBP (ENSSSCG00000010688) #15	INPP5F (ENSSSCG00000010687) #16	BAG3 (ENSSSCG00000010686) #18	TIAL1 (ENSSSCG00000010685) #19	RGS10 (ENSSSCG00000039838) #20	GRK5 (ENSSSCG00000010683) #21	PRDX3 (ENSSSCG00000010682) #22	SFXN4 (ENSSSCG00000010681) #23	DENND10 (ENSSSCG00000010680) #24	EIF3A (ENSSSCG00000010679) #25	NANOS1 (ENSSSCG00000040025)	ENSSSCG00000050381	CACUL1 (ENSSSCG00000038222) #26	PRLHR (ENSSSCG00000037789)	FAM204A (ENSSSCG00000010674) #27	RAB11FIP2 (ENSSSCG00000010672) #28	EMX2 (ENSSSCG00000032558) #29	ENSSSCG00000010669 #30	SLC18A2 (ENSSSCG00000020671) #31	VAX1 (ENSSSCG00000010666)	ENSSSCG00000042469	SHTN1 (ENSSSCG00000010665)
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Equus	ANCESTRAL SPECIES	9	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Donkey	DUPLICATION
Donkey	MODERN SPECIES	11	NSMCE4A (ENSEASG00005014412) #7	ENSEASG00005014414 #8	ATE1 (ENSEASG00005014421) #9	FGFR2 (ENSEASG00005014428) #10	WDR11 (ENSEASG00005014435) #12	PLPP4 (ENSEASG00005014441) #13	SEC23IP (ENSEASG00005014443) #14	MCMBP (ENSEASG00005014444) #15	ENSEASG00005038260	INPP5F (ENSEASG00005014445) #16	BAG3 (ENSEASG00005014448) #18	TIAL1 (ENSEASG00005014449) #19	RGS10 (ENSEASG00005038309) #20	GRK5 (ENSEASG00005014452) #21	ENSEASG00005036811	ENSEASG00005014455 #22	SFXN4 (ENSEASG00005014456) #23	DENND10 (ENSEASG00005014457) #24	EIF3A (ENSEASG00005014459) #25	NANOS1 (ENSEASG00005024606)	CACUL1 (ENSEASG00005014469) #26	PRLHR (ENSEASG00005014473)	FAM204A (ENSEASG00005014474) #27	RAB11FIP2 (ENSEASG00005014475) #28	EMX2 (ENSEASG00005014478) #29	PDZD8 (ENSEASG00005014486) #30	SLC18A2 (ENSEASG00005014491) #31	KCNK18 (ENSEASG00005014501) #32	VAX1 (ENSEASG00005014505)	SHTN1 (ENSEASG00005014511)	ENO4 (ENSEASG00005014520) #34
Donkey	MODERN SPECIES	3	IL5 (ENSEASG00005017855)	RAD50 (ENSEASG00005016481)	IL13 (ENSEASG00005026317)	ENSEASG00005017875	KIF3A (ENSEASG00005017941)	ENSEASG00005027696	SEPTIN8 (ENSEASG00005018336)	SOWAHA (ENSEASG00005025428)	SHROOM1 (ENSEASG00005018346)	GDF9 (ENSEASG00005024265)	ENSEASG00005035424	LEAP2 (ENSEASG00005024445)	AFF4 (ENSEASG00005018361)	ZCCHC10 (ENSEASG00005037597)	HSPA4 (ENSEASG00005018382)	ENSEASG00005025760 #22	FSTL4 (ENSEASG00005018409)	C5orf15 (ENSEASG00005018451)	VDAC1 (ENSEASG00005018462)	TCF7 (ENSEASG00005018474)	SKP1 (ENSEASG00005037065)	PPP2CA (ENSEASG00005037929)	CDKL3 (ENSEASG00005018501)	UBE2B (ENSEASG00005030009)	CDKN2AIPNL (ENSEASG00005026846)	ENSEASG00005031046	JADE2 (ENSEASG00005018548)	SAR1B (ENSEASG00005018603)	SEC24A (ENSEASG00005018668)	CAMLG (ENSEASG00005027453)	DDX46 (ENSEASG00005020329)
Horse	MODERN SPECIES		TACC2 (ENSECAG00000018280)	BTBD16 (ENSECAG00000008814)	NSMCE4A (ENSECAG00000016651) #7	ATE1 (ENSECAG00000012383) #9	FGFR2 (ENSECAG00000013960) #10	WDR11 (ENSECAG00000019673) #12	PLPP4 (ENSECAG00000023526) #13	SEC23IP (ENSECAG00000000536) #14	MCMBP (ENSECAG00000015061) #15	INPP5F (ENSECAG00000014941) #16	ENSECAG00000032636 #17	TIAL1 (ENSECAG00000009970) #19	RGS10 (ENSECAG00000023632) #20	GRK5 (ENSECAG00000023764) #21	ENSECAG00000035538	PRDX3 (ENSECAG00000017026) #22	SFXN4 (ENSECAG00000012309) #23	DENND10 (ENSECAG00000013713) #24	EIF3A (ENSECAG00000021880) #25	NANOS1 (ENSECAG00000003656)	CACUL1 (ENSECAG00000013139) #26	PRLHR (ENSECAG00000003701)	FAM204A (ENSECAG00000019024) #27	RAB11FIP2 (ENSECAG00000019791) #28	EMX2 (ENSECAG00000031152) #29	PDZD8 (ENSECAG00000023468) #30	SLC18A2 (ENSECAG00000024054) #31	KCNK18 (ENSECAG00000037881) #32	VAX1 (ENSECAG00000023955)	SHTN1 (ENSECAG00000007373)	ENO4 (ENSECAG00000013196) #34
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447.r #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Megabat	MODERN SPECIES	2960														RGS10 (ENSPVAG00000003163) #20	GRK5 (ENSPVAG00000003161) #21	PRDX3 (ENSPVAG00000003158) #22	ENSPVAG00000003156 #23	DENND10 (ENSPVAG00000003151) #24	EIF3A (ENSPVAG00000003148) #25	NANOS1 (ENSPVAG00000003146)
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447.r #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Greater horseshoe bat	MODERN SPECIES	7	BTBD16 (ENSRFEG00010010148)	TACC2 (ENSRFEG00010010381)	NSMCE4A (ENSRFEG00010010935) #7	ENSRFEG00010010986 #8	ATE1 (ENSRFEG00010011030) #9	FGFR2 (ENSRFEG00010011408) #10	WDR11 (ENSRFEG00010011888) #12	PLPP4 (ENSRFEG00010011968) #13	SEC23IP (ENSRFEG00010012086) #14	MCMBP (ENSRFEG00010012192) #15	INPP5F (ENSRFEG00010012275) #16	BAG3 (ENSRFEG00010012499) #18	TIAL1 (ENSRFEG00010012554) #19	RGS10 (ENSRFEG00010012645) #20	GRK5 (ENSRFEG00010012799) #21	PRDX3 (ENSRFEG00010012853) #22	SFXN4 (ENSRFEG00010012886) #23	DENND10 (ENSRFEG00010013102) #24	EIF3A (ENSRFEG00010013169) #25	NANOS1 (ENSRFEG00010013284)	CACUL1 (ENSRFEG00010013309) #26	PRLHR (ENSRFEG00010013380)	RAB11FIP2 (ENSRFEG00010013676) #28	EMX2 (ENSRFEG00010013738) #29	PDZD8 (ENSRFEG00010013773) #30	SLC18A2 (ENSRFEG00010013808) #31	VAX1 (ENSRFEG00010013860)	SHTN1 (ENSRFEG00010005393)	ENO4 (ENSRFEG00010005528) #34	HSPA12A (ENSRFEG00010005760) #33	PNLIPRP2 (ENSRFEG00010005991) #36
Microbat	MODERN SPECIES	1282														ENSMLUG00000006062	GRK5 (ENSMLUG00000003608) #21	PRDX3 (ENSMLUG00000012871) #22	SFXN4 (ENSMLUG00000012860) #23	DENND10 (ENSMLUG00000012854) #24	EIF3A (ENSMLUG00000005771) #25	ENSMLUG00000026243	CACUL1 (ENSMLUG00000002860) #26	ENSMLUG00000027454 #27	RAB11FIP2 (ENSMLUG00000015200) #28
Carnivora	ANCESTRAL SPECIES	16	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Canidae	DUPLICATION
Canidae	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.m #22
Canis_lupus	DUPLICATION
Canis_lupus	ANCESTRAL SPECIES	29	ENSGT00940000160059.a.a	ENSGT00940000153458.A	ENSGT00950000185351	ENSGT00390000007809.b	ENSGT00390000003759	ENSGT00940000159119.b	ENSGT00390000004871.b.k.a.b	ENSGT00530000063891	ENSGT00940000161119	ENSGT00940000159935	ENSGT00580000081600.c.a	ENSGT01010000222287.B.a.b.a	ENSGT00940000155757	ENSGT00940000156280	ENSGT00900000143483	ENSGT00940000153430.a.b.m.a #22	ENSGT00940000158304	ENSGT00390000020445	ENSGT00940000163221	ENSGT00940000155281	ENSGT00940000158227	ENSGT00940000162156	ENSGT00950000183019.f.a	ENSGT00940000159945	ENSGT00940000159301	ENSGT00940000161049	ENSGT00390000010557	ENSGT00940000158945	ENSGT01050000244857.B.a	ENSGT00630000089910	ENSGT01100000263569.a.a.f.a
Dog	MODERN SPECIES	7	UBE3C (ENSCAFG00845013835)	MNX1 (ENSCAFG00845013721)	ENSCAFG00845013708	NOM1 (ENSCAFG00845013684)	LMBR1 (ENSCAFG00845013513)	RNF32 (ENSCAFG00845013361)	SHH (ENSCAFG00845013237)	ENSCAFG00845013219	RBM33 (ENSCAFG00845013111)	ENSCAFG00845013046	EN2 (ENSCAFG00845013024)	INSIG1 (ENSCAFG00845012993)	HTR5A (ENSCAFG00845012951)	PAXIP1 (ENSCAFG00845012859)	DPP6 (ENSCAFG00845012287)	ENSCAFG00845011964 #22	ACTR3B (ENSCAFG00845011785)	XRCC2 (ENSCAFG00845011729)	CCT8L2 (ENSCAFG00845011714)	ENSCAFG00845011655	GALNT11 (ENSCAFG00845011586)	GALNTL5 (ENSCAFG00845011511)	ENSCAFG00845011458	PRKAG2 (ENSCAFG00845011242)	RHEB (ENSCAFG00845011138)	CRYGN (ENSCAFG00845011093)	ENSCAFG00845011044	NUB1 (ENSCAFG00845010982)	SMARCD3 (ENSCAFG00845010900)	CHPF2 (ENSCAFG00845010813)	ABCF2 (ENSCAFG00845010733)
Dingo	MODERN SPECIES	77	NOM1 (ENSCAFG00020005121)	ENSCAFG00020005139	LMBR1 (ENSCAFG00020005146)	RNF32 (ENSCAFG00020005170)	SHH (ENSCAFG00020005208)	ENSCAFG00020005221	ENSCAFG00020005230	ENSCAFG00020005234	ENSCAFG00020005253	EN2 (ENSCAFG00020005257)	INSIG1 (ENSCAFG00020005265)	HTR5A (ENSCAFG00020005282)	PAXIP1 (ENSCAFG00020005286)	DPP6 (ENSCAFG00020005314)	ENSCAFG00020005333	ENSCAFG00020005341 #22	ENSCAFG00020005358	XRCC2 (ENSCAFG00020005366)	CCT8L2 (ENSCAFG00020005377)	KMT2C (ENSCAFG00020005391)	GALNT11 (ENSCAFG00020005465)	ENSCAFG00020005481	ENSCAFG00020005486	PRKAG2 (ENSCAFG00020005497)	RHEB (ENSCAFG00020005505)	CRYGN (ENSCAFG00020005512)	ENSCAFG00020005513	NUB1 (ENSCAFG00020005516)	SMARCD3 (ENSCAFG00020005525)	CHPF2 (ENSCAFG00020005543)	ABCF2 (ENSCAFG00020005588)
Canis_lupus	ANCESTRAL SPECIES	46	ENSGT00950000182837.b.b	ENSGT00940000154714	ENSGT00940000154533.b.d	ENSGT00390000012204	ENSGT00940000157201	ENSGT00530000063686.a.a	ENSGT00390000007539.i.b.a.db.b.b	ENSGT00940000157541	ENSGT00390000009819.a.b.b	ENSGT00390000015050	ENSGT00390000000220.B	ENSGT00390000000220.A	ENSGT00940000158539	ENSGT00940000158526	ENSGT00530000064137.a.b	ENSGT00940000153430.a.b.m.b #22	ENSGT00390000016542	ENSGT00940000157233	ENSGT00950000183208.A.c.a	ENSGT00900000143214	ENSGT00390000006631	ENSGT00950000182860.a.b.b	ENSGT00390000008033	ENSGT00940000157521.b	ENSGT00900000141555	ENSGT00950000182883.b.a.a	ENSGT00940000155953	ENSGT00390000002862	ENSGT00940000159262	ENSGT01050000244848.C.a	ENSGT01030000234618.F
Dingo	MODERN SPECIES	101	RIF1 (ENSCAFG00020016401)	TNFAIP6 (ENSCAFG00020016399)	NMI (ENSCAFG00020016395)	ENSCAFG00020016392	ENSCAFG00020016388	RND3 (ENSCAFG00020016386)	ENSCAFG00020016382	MMADHC (ENSCAFG00020016380)	LYPD6 (ENSCAFG00020016377)	ENSCAFG00020016375	ENSCAFG00020016369	KIF5C (ENSCAFG00020016358)	ENSCAFG00020016356	EPC2 (ENSCAFG00020016353)	MBD5 (ENSCAFG00020016351)	ENSCAFG00020016350 #22	ENSCAFG00020016348	ORC4 (ENSCAFG00020016340)	ACVR2A (ENSCAFG00020016337)	ZEB2 (ENSCAFG00020016311)	ENSCAFG00020016307	GTDC1 (ENSCAFG00020016302)	ARHGAP15 (ENSCAFG00020016269)	KYNU (ENSCAFG00020016256)	ENSCAFG00020016252	LRP1B (ENSCAFG00020016211)	ENSCAFG00020016205	NXPH2 (ENSCAFG00020016197)	SPOPL (ENSCAFG00020016186)	HNMT (ENSCAFG00020016185)	THSD7B (ENSCAFG00020016172)
Dog	MODERN SPECIES	10	CACNB4 (ENSCAFG00845010078)	ARL5A (ENSCAFG00845009827)	NEB (ENSCAFG00845009157)	RIF1 (ENSCAFG00845008561)	TNFAIP6 (ENSCAFG00845008460)	NMI (ENSCAFG00845008371)	ENSCAFG00845008302	RND3 (ENSCAFG00845008171)	ENSCAFG00845008096	MMADHC (ENSCAFG00845007815)	LYPD6 (ENSCAFG00845007742)	LYPD6B (ENSCAFG00845007654)	KIF5C (ENSCAFG00845007529)	ENSCAFG00845007463	EPC2 (ENSCAFG00845007263)	ENSCAFG00845007155 #22	MBD5 (ENSCAFG00845006841)	ENSCAFG00845006609	ORC4 (ENSCAFG00845006436)	ACVR2A (ENSCAFG00845006266)	ZEB2 (ENSCAFG00845006084)	GTDC1 (ENSCAFG00845013883)	ARHGAP15 (ENSCAFG00845013638)	KYNU (ENSCAFG00845013520)	ENSCAFG00845013470	ENSCAFG00845013421	ENSCAFG00845013405	LRP1B (ENSCAFG00845011094)	NXPH2 (ENSCAFG00845010560)	SPOPL (ENSCAFG00845010518)	HNMT (ENSCAFG00845010412)
Red fox	MODERN SPECIES		NSMCE4A (ENSVVUG00000011499) #7	ENSVVUG00000011488 #8	ATE1 (ENSVVUG00000011469) #9	FGFR2 (ENSVVUG00000011385) #10	WDR11 (ENSVVUG00000011299) #12	ENSVVUG00000011295	PLPP4 (ENSVVUG00000011275) #13	ENSVVUG00000011255	SEC23IP (ENSVVUG00000011215) #14	MCMBP (ENSVVUG00000011144) #15	INPP5F (ENSVVUG00000011092) #16	BAG3 (ENSVVUG00000011045) #18	TIAL1 (ENSVVUG00000011029) #19	RGS10 (ENSVVUG00000011012)	GRK5 (ENSVVUG00000010990) #21	ENSVVUG00000010962 #22	SFXN4 (ENSVVUG00000010952) #23	DENND10 (ENSVVUG00000010922) #24	EIF3A (ENSVVUG00000010853) #25	CACUL1 (ENSVVUG00000010846) #26	PRLHR (ENSVVUG00000010804)	ENSVVUG00000010800	FAM204A (ENSVVUG00000010781) #27	RAB11FIP2 (ENSVVUG00000010728) #28	EMX2 (ENSVVUG00000010674) #29	PDZD8 (ENSVVUG00000010661) #30	SLC18A2 (ENSVVUG00000010653) #31	KCNK18 (ENSVVUG00000010649) #32	SHTN1 (ENSVVUG00000010591)	ENO4 (ENSVVUG00000010551) #34	HSPA12A (ENSVVUG00000010543) #33
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000163657	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.n #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000163657.f	ENSGT00390000004380.e.a.a	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.n #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Dingo	MODERN SPECIES	165	ENSCAFG00020014819 #7	ENSCAFG00020014813 #8	ATE1 (ENSCAFG00020014791) #9	FGFR2 (ENSCAFG00020014779) #10	WDR11 (ENSCAFG00020014683) #12	PLPP4 (ENSCAFG00020014668) #13	ENSCAFG00020014666	ENSCAFG00020014663	SEC23IP (ENSCAFG00020014659) #14	MCMBP (ENSCAFG00020014655) #15	INPP5F (ENSCAFG00020013935) #16	BAG3 (ENSCAFG00020013893) #18	TIAL1 (ENSCAFG00020013891) #19	RGS10 (ENSCAFG00020013888) #20	GRK5 (ENSCAFG00020013877) #21	ENSCAFG00020013867 #22	SFXN4 (ENSCAFG00020013859) #23	DENND10 (ENSCAFG00020013848) #24	EIF3A (ENSCAFG00020013841) #25	CACUL1 (ENSCAFG00020013839) #26	PRLHR (ENSCAFG00020013838)	FAM204A (ENSCAFG00020013835) #27	RAB11FIP2 (ENSCAFG00020013823) #28	ENSCAFG00020013812	EMX2 (ENSCAFG00020013802) #29	PDZD8 (ENSCAFG00020013794) #30	SLC18A2 (ENSCAFG00020013770) #31	KCNK18 (ENSCAFG00020013767) #32	VAX1 (ENSCAFG00020013764)	SHTN1 (ENSCAFG00020013700)	ENO4 (ENSCAFG00020013696) #34
Dog	MODERN SPECIES	20	NSMCE4A (ENSCAFG00845020544) #7	ATE1OS (ENSCAFG00845020507) #8	ATE1 (ENSCAFG00845020272) #9	FGFR2 (ENSCAFG00845019372) #10	WDR11 (ENSCAFG00845018912) #12	PLPP4 (ENSCAFG00845018703) #13	ENSCAFG00845018618	ENSCAFG00845018569	SEC23IP (ENSCAFG00845018243) #14	MCMBP (ENSCAFG00845017945) #15	SEC23IP (ENSCAFG00845017286) #16	BAG3 (ENSCAFG00845016933) #18	TIAL1 (ENSCAFG00845016533) #19	RGS10 (ENSCAFG00845016371) #20	GRK5 (ENSCAFG00845016167) #21	PRDX3 (ENSCAFG00845016072) #22	SFXN4 (ENSCAFG00845015969) #23	DENND10 (ENSCAFG00845015834) #24	EIF3A (ENSCAFG00845015674) #25	NANOS1 (ENSCAFG00845015640)	CACUL1 (ENSCAFG00845015577) #26	PRLHR (ENSCAFG00845031063)	FAM204A (ENSCAFG00845031061) #27	RAB11FIP2 (ENSCAFG00845031060) #28	EMX2 (ENSCAFG00845031057) #29	PDZD8 (ENSCAFG00845031054) #30	SLC18A2 (ENSCAFG00845031051) #31	KCNK18 (ENSCAFG00845031048) #32	VAX1 (ENSCAFG00845031045)	SHTN1 (ENSCAFG00845031041)	ENO4 (ENSCAFG00845031032) #34
Red fox	MODERN SPECIES	100	ENSVVUG00000010430	C10orf67 (ENSVVUG00000010441)	MSRB2 (ENSVVUG00000010468)	ARMC3 (ENSVVUG00000010474)	PIP4K2A (ENSVVUG00000010501)	SPAG6 (ENSVVUG00000010513)	BMI1 (ENSVVUG00000010556)	COMMD3 (ENSVVUG00000010568)	DNAJC1 (ENSVVUG00000010576)	MLLT10 (ENSVVUG00000010599)	SKIDA1 (ENSVVUG00000010691)	ENSVVUG00000010711	ENSVVUG00000010727	ENSVVUG00000010761	ENSVVUG00000010764	ENSVVUG00000010777 #22	PLXDC2 (ENSVVUG00000010808)	ENSVVUG00000010919
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Mustelinae	ANCESTRAL SPECIES	40	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
American mink	DUPLICATION
American mink	MODERN SPECIES	35	BTBD16 (ENSNVIG00000007104)	TACC2 (ENSNVIG00000006963)	NSMCE4A (ENSNVIG00000006954) #7	ATE1 (ENSNVIG00000006880) #9	FGFR2 (ENSNVIG00000006193) #10	WDR11 (ENSNVIG00000006011) #12	ENSNVIG00000005981	PLPP4 (ENSNVIG00000005960) #13	SEC23IP (ENSNVIG00000005465) #14	MCMBP (ENSNVIG00000005366) #15	INPP5F (ENSNVIG00000005245) #16	BAG3 (ENSNVIG00000005182) #18	TIAL1 (ENSNVIG00000005133) #19	RGS10 (ENSNVIG00000005120) #20	GRK5 (ENSNVIG00000005095) #21	ENSNVIG00000005067 #22	SFXN4 (ENSNVIG00000005056) #23	DENND10 (ENSNVIG00000005028) #24	EIF3A (ENSNVIG00000004975) #25	CACUL1 (ENSNVIG00000004912) #26	PRLHR (ENSNVIG00000004906)	F204A (ENSNVIG00000004886) #27	RFIP2 (ENSNVIG00000004877) #28	EMX2 (ENSNVIG00000004854) #29	PDZD8 (ENSNVIG00000004839) #30	SLC18A2 (ENSNVIG00000004792) #31	KCNK18 (ENSNVIG00000004771) #32	VAX1 (ENSNVIG00000004765)	SHTN1 (ENSNVIG00000004699)	ENO4 (ENSNVIG00000004662) #34	HSPA12A (ENSNVIG00000004621) #33
American mink	MODERN SPECIES	62								ENSNVIG00000016739	ENSNVIG00000016725	ENSNVIG00000016707	ENSNVIG00000016695	RECK (ENSNVIG00000016655)	GLIPR2 (ENSNVIG00000016605)	CCIN (ENSNVIG00000016601)	CLTA (ENSNVIG00000016519)	ENSNVIG00000016511 #22	GNE (ENSNVIG00000016422)	RNF38 (ENSNVIG00000016353)	MELK (ENSNVIG00000016306)	ENSNVIG00000016301	PAX5 (ENSNVIG00000016049)	ZCCHC7 (ENSNVIG00000016001)	GRHPR (ENSNVIG00000015986)	ZBTB5 (ENSNVIG00000015984)	RPA49 (ENSNVIG00000015941)	FBX10 (ENSNVIG00000015899)	FRMPD1 (ENSNVIG00000015854)	TRMT10B (ENSNVIG00000015833)	EXOSC3 (ENSNVIG00000015819)	DCAF10 (ENSNVIG00000015802)	ENSNVIG00000015798
Ferret	MODERN SPECIES	193	NSMCE4A (ENSMPUG00000002960) #7	ATE1 (ENSMPUG00000002968) #9	ENSMPUG00000002979	ENSMPUG00000002985	FGFR2 (ENSMPUG00000002989) #10	ENSMPUG00000002994	WDR11 (ENSMPUG00000002997) #12	PLPP4 (ENSMPUG00000003005) #13	SEC23IP (ENSMPUG00000003023) #14	MCMBP (ENSMPUG00000003036) #15	INPP5F (ENSMPUG00000003046) #16	BAG3 (ENSMPUG00000003057) #18	TIAL1 (ENSMPUG00000003060) #19	RGS10 (ENSMPUG00000003064) #20	GRK5 (ENSMPUG00000003068) #21	PRDX3 (ENSMPUG00000003074) #22	SFXN4 (ENSMPUG00000003077) #23	DENND10 (ENSMPUG00000003085) #24	EIF3A (ENSMPUG00000003093) #25	CACUL1 (ENSMPUG00000003204) #26	PRLHR (ENSMPUG00000019261)	ENSMPUG00000003239 #27	RAB11FIP2 (ENSMPUG00000003288) #28	ENSMPUG00000003294	EMX2 (ENSMPUG00000003297) #29	PDZD8 (ENSMPUG00000003305) #30	SLC18A2 (ENSMPUG00000003349) #31	ENSMPUG00000003363	VAX1 (ENSMPUG00000003374)	SHTN1 (ENSMPUG00000003407)	ENO4 (ENSMPUG00000003414) #34
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00940000166528.a.a	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
Ursus	ANCESTRAL SPECIES	7	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00940000166528.a.a	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000165789	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
Polar bear	MODERN SPECIES	92	ENSUMAG00000004468 #8	ATE1 (ENSUMAG00000004457) #9	ENSUMAG00000004366 #10	ENSUMAG00000004111 #10	WDR11 (ENSUMAG00000004075) #12	ENSUMAG00000004063	PLPP4 (ENSUMAG00000004036) #13	SEC23IP (ENSUMAG00000003896) #14	ENSUMAG00000003871	MCMBP (ENSUMAG00000003425) #15	INPP5F (ENSUMAG00000003243) #16	BAG3 (ENSUMAG00000003213) #18	TIAL1 (ENSUMAG00000003207) #19	RGS10 (ENSUMAG00000003205) #20	GRK5 (ENSUMAG00000003203) #21	PRDX3 (ENSUMAG00000003198) #22	SFXN4 (ENSUMAG00000003195) #23	DENND10 (ENSUMAG00000003193) #24	EIF3A (ENSUMAG00000003180) #25	CACUL1 (ENSUMAG00000003168) #26	PRLHR (ENSUMAG00000003164)	FAM204A (ENSUMAG00000003156) #27	RAB11FIP2 (ENSUMAG00000003131) #28	PDZD8 (ENSUMAG00000003098) #30	SLC18A2 (ENSUMAG00000003070) #31	ENSUMAG00000003060	SHTN1 (ENSUMAG00000002862)	ENO4 (ENSUMAG00000002829) #34	HSPA12A (ENSUMAG00000002794) #33	C10orf82 (ENSUMAG00000002785) #35	PNLIPRP2 (ENSUMAG00000002728) #36
American black bear	MODERN SPECIES	402															GRK5 (ENSUAMG00000009453) #21	PRDX3 (ENSUAMG00000009454) #22	ENSUAMG00000009455 #23	DENND10 (ENSUAMG00000009459) #24	EIF3A (ENSUAMG00000009473) #25
Giant Panda	MODERN SPECIES	16	TACC2 (ENSAMEG00000010858)	NSMCE4A (ENSAMEG00000010897) #7	ENSAMEG00000010913 #8	ATE1 (ENSAMEG00000010918) #9	FGFR2 (ENSAMEG00000010959) #10	WDR11 (ENSAMEG00000010302) #12	PLPP4 (ENSAMEG00000010299) #13	SEC23IP (ENSAMEG00000010251) #14	ENSAMEG00000001122	MCMBP (ENSAMEG00000010208) #15	INPP5F (ENSAMEG00000010186) #16	BAG3 (ENSAMEG00000010175) #18	TIAL1 (ENSAMEG00000010147) #19	RGS10 (ENSAMEG00000010141) #20	GRK5 (ENSAMEG00000010049) #21	PRDX3 (ENSAMEG00000010025) #22	ENSAMEG00000010019 #23	DENND10 (ENSAMEG00000009999) #24	EIF3A (ENSAMEG00000009961) #25	ENSAMEG00000025767	CACUL1 (ENSAMEG00000009950) #26	PRLHR (ENSAMEG00000020159)	FAM204A (ENSAMEG00000024923) #27	RAB11FIP2 (ENSAMEG00000009921) #28	EMX2 (ENSAMEG00000025286) #29	ENSAMEG00000014138 #30	SLC18A2 (ENSAMEG00000014094) #31	KCNK18 (ENSAMEG00000014089) #32	SHTN1 (ENSAMEG00000014060)	ENO4 (ENSAMEG00000014046) #34	HSPA12A (ENSAMEG00000014024) #33
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
leopard	MODERN SPECIES	33	BTBD16 (ENSPPRG00000003961)	ENSPPRG00000007110	NSMCE4A (ENSPPRG00000007618) #7	ATE1 (ENSPPRG00000009731) #9	ENSPPRG00000011499 #10	ENSPPRG00000017103 #10	WDR11 (ENSPPRG00000021913) #12	PLPP4 (ENSPPRG00000023280) #13	SEC23IP (ENSPPRG00000022653) #14	MCMBP (ENSPPRG00000001647) #15	INPP5F (ENSPPRG00000002675) #16	BAG3 (ENSPPRG00000002763) #18	TIAL1 (ENSPPRG00000003226) #19	RGS10 (ENSPPRG00000003836) #20	GRK5 (ENSPPRG00000005052) #21	PRDX3 (ENSPPRG00000005382) #22	SFXN4 (ENSPPRG00000005852) #23	DENND10 (ENSPPRG00000007455) #24	EIF3A (ENSPPRG00000008918) #25	NANOS1 (ENSPPRG00000021230)	CACUL1 (ENSPPRG00000009658) #26	PRLHR (ENSPPRG00000021289)	FAM204A (ENSPPRG00000010037) #27	ENSPPRG00000010227	RAB11FIP2 (ENSPPRG00000010519) #28	EMX2 (ENSPPRG00000010930) #29	PDZD8 (ENSPPRG00000011062) #30	SLC18A2 (ENSPPRG00000011245) #31	KCNK18 (ENSPPRG00000012025) #32	VAX1 (ENSPPRG00000012370)	SHTN1 (ENSPPRG00000014439)
lion	MODERN SPECIES	11	BTBD16 (ENSPLOG00000018372)	ENSPLOG00000018655	ENSPLOG00000019457	NSMCE4A (ENSPLOG00000019528) #7	ATE1 (ENSPLOG00000019598) #9	FGFR2 (ENSPLOG00000020164) #10	WDR11 (ENSPLOG00000021477) #12	PLPP4 (ENSPLOG00000021510) #13	SEC23IP (ENSPLOG00000021541) #14	MCMBP (ENSPLOG00000021644) #15	INPP5F (ENSPLOG00000021703) #16	BAG3 (ENSPLOG00000021815) #18	TIAL1 (ENSPLOG00000021852) #19	RGS10 (ENSPLOG00000021912) #20	GRK5 (ENSPLOG00000021943) #21	PRDX3 (ENSPLOG00000021953) #22	SFXN4 (ENSPLOG00000021975) #23	DENND10 (ENSPLOG00000022001) #24	EIF3A (ENSPLOG00000022036) #25	NANOS1 (ENSPLOG00000022092)	CACUL1 (ENSPLOG00000022099) #26	PRLHR (ENSPLOG00000022114)	FAM204A (ENSPLOG00000022124) #27	RAB11FIP2 (ENSPLOG00000022142) #28	ENSPLOG00000022165	EMX2 (ENSPLOG00000022174) #29	PDZD8 (ENSPLOG00000022186) #30	SLC18A2 (ENSPLOG00000022197) #31	KCNK18 (ENSPLOG00000022215) #32	VAX1 (ENSPLOG00000022240)	SHTN1 (ENSPLOG00000022277)
Tiger	MODERN SPECIES	210	BTBD16 (ENSPTIG00000014571)	ENSPTIG00000022110	NSMCE4A (ENSPTIG00000022082) #7	ATE1 (ENSPTIG00000021995) #9	ENSPTIG00000021238 #10	ENSPTIG00000007977 #10	WDR11 (ENSPTIG00000001166) #12	PLPP4 (ENSPTIG00000018990) #13	SEC23IP (ENSPTIG00000017676) #14	MCMBP (ENSPTIG00000014781) #15	INPP5F (ENSPTIG00000011407) #16	BAG3 (ENSPTIG00000009763) #18	TIAL1 (ENSPTIG00000007899) #19	RGS10 (ENSPTIG00000006086) #20	GRK5 (ENSPTIG00000021829) #21	PRDX3 (ENSPTIG00000021567) #22	SFXN4 (ENSPTIG00000020304) #23	DENND10 (ENSPTIG00000018111) #24	EIF3A (ENSPTIG00000013403) #25	CACUL1 (ENSPTIG00000012422) #26	PRLHR (ENSPTIG00000000631)	FAM204A (ENSPTIG00000010425) #27	ENSPTIG00000010114	RAB11FIP2 (ENSPTIG00000008394) #28	ENSPTIG00000007739 #29	PDZD8 (ENSPTIG00000006938) #30	SLC18A2 (ENSPTIG00000000431) #31	KCNK18 (ENSPTIG00000019400) #32	SHTN1 (ENSPTIG00000013937)	ENSPTIG00000012119 #34	HSPA12A (ENSPTIG00000008579) #33
Cat	MODERN SPECIES	242	PLEKHA1 (ENSFCAG00000023664)	BTBD16 (ENSFCAG00000003652)	NSMCE4A (ENSFCAG00000003647) #7	TACC2 (ENSFCAG00000026479)	ATE1 (ENSFCAG00000027935) #9	FGFR2 (ENSFCAG00000003692) #10	WDR11 (ENSFCAG00000014314) #12	PLPP4 (ENSFCAG00000042026) #13	SEC23IP (ENSFCAG00000014908) #14	MCMBP (ENSFCAG00000014907) #15	INPP5F (ENSFCAG00000024040) #16	BAG3 (ENSFCAG00000023182) #18	TIAL1 (ENSFCAG00000031690) #19	RGS10 (ENSFCAG00000026725) #20	GRK5 (ENSFCAG00000010660) #21	PRDX3 (ENSFCAG00000010659) #22	SFXN4 (ENSFCAG00000010658) #23	DENND10 (ENSFCAG00000010657) #24	EIF3A (ENSFCAG00000010656) #25	ENSFCAG00000051869	CACUL1 (ENSFCAG00000044111) #26	PRLHR (ENSFCAG00000043088)	FAM204A (ENSFCAG00000013021) #27	RAB11FIP2 (ENSFCAG00000022481) #28	ENSFCAG00000050192	EMX2 (ENSFCAG00000042351) #29	PDZD8 (ENSFCAG00000018713) #30	SLC18A2 (ENSFCAG00000012991) #31	KCNK18 (ENSFCAG00000035502) #32	VAX1 (ENSFCAG00000036220)	SHTN1 (ENSFCAG00000023428)
Eulipotyphla	ANCESTRAL SPECIES	2233																ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23
Common shrew	MODERN SPECIES	4659																ENSSARG00000005771 #22
Hedgehog	MODERN SPECIES	7538																PRDX3 (ENSEEUG00000009299) #22	ENSEEUG00000009123 #23
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Primates	ANCESTRAL SPECIES	16	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.q #22
Catarrhini	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.q #22
Cercopithecidae	ANCESTRAL SPECIES	24	ENSGT00510000048276	ENSGT00950000182935.B.b.c	ENSGT00390000017606.a.a.i.a.b.a.b.b	ENSGT00940000157367	ENSGT00940000158365	ENSGT00940000162772	ENSGT00940000161999.t.a	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701	ENSGT00940000154405.a.a	ENSGT00940000154405.a.b	ENSGT00910000147154	ENSGT00940000161265	ENSGT00940000160024	ENSGT00940000153430.a.b.q #22	ENSGT00940000156054	ENSGT00390000009228.b	ENSGT00390000016475.e.b	ENSGT00940000153137.a.a.g	ENSGT00940000162433	ENSGT00760000119398	ENSGT00940000160049	ENSGT00910000147308	ENSGT00390000004010.a.b.b	ENSGT01030000234586.A.b	ENSGT00940000153536.a.a	ENSGT00940000153861.b	ENSGT00940000161112	ENSGT00940000158756	ENSGT00940000153560.b.b.b
Rhinopithecus	ANCESTRAL SPECIES	3	ENSGT00910000147557	ENSGT00510000048276	ENSGT00950000182935.B.b.c	ENSGT00390000017606.a.a.i.a.b.a.b.b	ENSGT00940000157367	ENSGT00940000158365	ENSGT00940000162772	ENSGT00940000161999.t.a	ENSGT00940000162695.e.b	ENSGT00940000162695.f	ENSGT00940000164701	ENSGT00940000154405.a.a	ENSGT00940000154405.a.b	ENSGT00940000161265	ENSGT00940000160024	ENSGT00940000153430.a.b.q #22	ENSGT00940000156054	ENSGT00910000147211	ENSGT00390000009228.b	ENSGT00390000016475.e.b	ENSGT00940000153137.a.a.g	ENSGT00940000162433	ENSGT00760000119398	ENSGT00940000160049	ENSGT00910000147308	ENSGT00390000004010.a.b.b	ENSGT01030000234586.A.b	ENSGT00940000153536.a.a	ENSGT00940000153861.b	ENSGT00940000161112	ENSGT00940000158756
Golden snub-nosed monkey	MODERN SPECIES	2721	MGAT3 (ENSRROG00000021928)	ENSRROG00000040942	TAB1 (ENSRROG00000032120)	SYNGR1 (ENSRROG00000029051)	ENSRROG00000044143	PDGFB (ENSRROG00000007216)	CBX7 (ENSRROG00000033680)	APOBEC3H (ENSRROG00000024699)	APOBEC3C (ENSRROG00000029045)	ENSRROG00000028557	APOBEC3G (ENSRROG00000028773)	CBX6 (ENSRROG00000040472)	NPTXR (ENSRROG00000038554)	DNAL4 (ENSRROG00000035941)	SUN2 (ENSRROG00000038392)	ENSRROG00000033588 #22	GTPBP1 (ENSRROG00000044733)	ENSRROG00000042829	JOSD1 (ENSRROG00000031876)	TOMM22 (ENSRROG00000042007)	CBY1 (ENSRROG00000040566)	FAM227A (ENSRROG00000044925)	DMC1 (ENSRROG00000043002)	ENSRROG00000037265	DDX17 (ENSRROG00000045378)	KDELR3 (ENSRROG00000030931)	KCNJ4 (ENSRROG00000008366)	CSNK1E (ENSRROG00000040037)	TMEM184B (ENSRROG00000040391)	MAFF (ENSRROG00000042813)	ENSRROG00000019366
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.q #22
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.q #22
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.q #22
Olive baboon	MODERN SPECIES	2	TACC2 (ENSPANG00000020477)	NSMCE4A (ENSPANG00000020473) #7	ATE1 (ENSPANG00000020496) #9	FGFR2 (ENSPANG00000020505) #10	ENSPANG00000044749	ENSPANG00000038420	WDR11 (ENSPANG00000020499) #12	PLPP4 (ENSPANG00000020515) #13	SEC23IP (ENSPANG00000020516) #14	MCMBP (ENSPANG00000020524) #15	INPP5F (ENSPANG00000020522) #16	BAG3 (ENSPANG00000020521) #18	TIAL1 (ENSPANG00000020518) #19	RGS10 (ENSPANG00000020561) #20	GRK5 (ENSPANG00000020570) #21	ENSPANG00000048950 #22	SFXN4 (ENSPANG00000020612) #23	DENND10 (ENSPANG00000020611) #24	EIF3A (ENSPANG00000020615) #25	NANOS1 (ENSPANG00000000318)	CACUL1 (ENSPANG00000020622) #26	PRLHR (ENSPANG00000035063)	ENSPANG00000037634	FAM204A (ENSPANG00000020620) #27	ENSPANG00000037544	ENSPANG00000047195	RAB11FIP2 (ENSPANG00000020617) #28	EMX2 (ENSPANG00000020616) #29	PDZD8 (ENSPANG00000020702) #30	SLC18A2 (ENSPANG00000020706) #31	KCNK18 (ENSPANG00000020705) #32
Hominoidea	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.q #22
Hominidae	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.q #22
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.q #22
Homo/Pan group	ANCESTRAL SPECIES	20	ENSGT00950000182935.B.b.c	ENSGT00390000017606.a.a.i.a.b.a.b.b	ENSGT00940000157367	ENSGT00940000158365	ENSGT00940000162772	ENSGT00940000161999.t.a	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701.a	ENSGT00940000154405.a.a	ENSGT00940000154405.a.b	ENSGT00910000147154	ENSGT00940000161265	ENSGT00940000160024	ENSGT00910000148162	ENSGT00940000153430.a.b.q #22	ENSGT00940000156054	ENSGT00390000009228.b	ENSGT00390000016475.e.b	ENSGT00940000153137.a.a.g	ENSGT00940000162433	ENSGT00760000119398	ENSGT00940000160049	ENSGT00910000147308	ENSGT00390000004010.a.b.b	ENSGT01030000234586.A.b	ENSGT00940000153536.a.a	ENSGT00940000153861.b	ENSGT00940000161112	ENSGT00940000158756	ENSGT00940000153560.b.b.b
Pan	ANCESTRAL SPECIES	23	ENSGT00950000182935.B.b.c	ENSGT00390000017606.a.a.i.a.b.a.b.a.b.b	ENSGT00940000157367	ENSGT00940000158365	ENSGT00940000162772	ENSGT00940000161999.t.a	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701.a	ENSGT00940000154405.a.a	ENSGT00940000154405.a.b	ENSGT00910000147154	ENSGT00940000161265	ENSGT00940000160024	ENSGT00910000148162	ENSGT00940000153430.a.b.q #22	ENSGT00940000156054	ENSGT00390000009228.b	ENSGT00390000016475.e.b	ENSGT00940000153137.a.a.g	ENSGT00940000162433	ENSGT00760000119398	ENSGT00940000160049	ENSGT00910000147308	ENSGT00390000004010.a.b.b	ENSGT01030000234586.A.b	ENSGT00940000153536.a.a	ENSGT00940000153861.b	ENSGT00940000161112	ENSGT00940000158756	ENSGT00940000153560.b.b.b
Bonobo	MODERN SPECIES	13	RPL3 (ENSPPAG00000037466)	PDGFB (ENSPPAG00000029810)	CBX7 (ENSPPAG00000028315)	APOBEC3H (ENSPPAG00000036522)	ENSPPAG00000033277	ENSPPAG00000031519	ENSPPAG00000028218	APOBEC3C (ENSPPAG00000014118)	APOBEC3B (ENSPPAG00000009288)	CBX6 (ENSPPAG00000037312)	ENSPPAG00000036694	ENSPPAG00000035771	DNAL4 (ENSPPAG00000031504)	SUN2 (ENSPPAG00000038642)	ENSPPAG00000037574	ENSPPAG00000035397 #22	GTPBP1 (ENSPPAG00000024682)	JOSD1 (ENSPPAG00000011451)	TOMM22 (ENSPPAG00000033147)	ENSPPAG00000031485	FAM227A (ENSPPAG00000025902)	DMC1 (ENSPPAG00000039727)	ENSPPAG00000005436	DDX17 (ENSPPAG00000042301)	KDELR3 (ENSPPAG00000029491)	KCNJ4 (ENSPPAG00000021519)	CSNK1E (ENSPPAG00000034621)	TMEM184B (ENSPPAG00000025777)	ENSPPAG00000027986	PLA2G6 (ENSPPAG00000028438)	BAIAP2L2 (ENSPPAG00000033483)
Chimpanzee	MODERN SPECIES	13	SYNGR1 (ENSPTRG00000041182)	RPL3 (ENSPTRG00000049360)	PDGFB (ENSPTRG00000014392)	CBX7 (ENSPTRG00000014391)	APOBEC3H (ENSPTRG00000014390)	APOBEC3G (ENSPTRG00000014387)	APOBEC3C (ENSPTRG00000014385)	APOBEC3D (ENSPTRG00000041588)	ENSPTRG00000014382	APOBEC3B (ENSPTRG00000014384)	CBX6 (ENSPTRG00000051110)	ENSPTRG00000048123	NPTXR (ENSPTRG00000014380)	DNAL4 (ENSPTRG00000014379)	SUN2 (ENSPTRG00000023985)	ENSPTRG00000043000 #22	GTPBP1 (ENSPTRG00000014376)	JOSD1 (ENSPTRG00000014375)	TOMM22 (ENSPTRG00000014374)	CBY1 (ENSPTRG00000014373)	FAM227A (ENSPTRG00000014372)	DMC1 (ENSPTRG00000014370)	ENSPTRG00000051975	DDX17 (ENSPTRG00000014369)	KDELR3 (ENSPTRG00000014367)	KCNJ4 (ENSPTRG00000050908)	CSNK1E (ENSPTRG00000014365)	TMEM184B (ENSPTRG00000022822)	MAFF (ENSPTRG00000029431)	PLA2G6 (ENSPTRG00000014362)	BAIAP2L2 (ENSPTRG00000014361)
Gibbon	MODERN SPECIES	16					PTPRU (ENSNLEG00000031816)	ENSNLEG00000009932	SRSF4 (ENSNLEG00000009916)	EPB41 (ENSNLEG00000009867)	ENSNLEG00000009864	YTHDF2 (ENSNLEG00000009856)	GMEB1 (ENSNLEG00000009837)	ENSNLEG00000009827	ENSNLEG00000018583	TRNAU1AP (ENSNLEG00000009822)	RCC1 (ENSNLEG00000009802)	ENSNLEG00000029704 #22	ENSNLEG00000034272	ENSNLEG00000009792	MED18 (ENSNLEG00000009789)	SESN2 (ENSNLEG00000009780)	ATP5IF1 (ENSNLEG00000032433)	DNAJC8 (ENSNLEG00000009762)	PTAFR (ENSNLEG00000009760)	EYA3 (ENSNLEG00000009724)	XKR8 (ENSNLEG00000009722)	SMPDL3B (ENSNLEG00000009709)	RPA2 (ENSNLEG00000009702)	ENSNLEG00000009697	ENSNLEG00000009695	PPP1R8 (ENSNLEG00000009676)	STX12 (ENSNLEG00000030651)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.q #22
Mas night monkey	MODERN SPECIES	527	ENSANAG00000007964	ENSANAG00000023134	OR10G6 (ENSANAG00000033193)	TMEM225 (ENSANAG00000035726)	ZNF202 (ENSANAG00000034002)	SCN3B (ENSANAG00000037873)	ENSANAG00000032228	GRAMD1B (ENSANAG00000019027)	ENSANAG00000028995	CLMP (ENSANAG00000036244)	ENSANAG00000034435	BSX (ENSANAG00000027600)	JHY (ENSANAG00000032921)	CRTAM (ENSANAG00000035170)	UBASH3B (ENSANAG00000020625)	ENSANAG00000035361 #22	BLID (ENSANAG00000028884)	SORL1 (ENSANAG00000031276)	SC5D (ENSANAG00000031781)	TECTA (ENSANAG00000021954)	TBCEL (ENSANAG00000037781)	GRIK4 (ENSANAG00000029340)	ARHGEF12 (ENSANAG00000035929)	TLCD5 (ENSANAG00000028920)	POU2F3 (ENSANAG00000037801)	OAF (ENSANAG00000028659)	TRIM29 (ENSANAG00000035721)	NECTIN1 (ENSANAG00000037728)	THY1 (ENSANAG00000034071)	USP2 (ENSANAG00000038057)	MFRP (ENSANAG00000021927)
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00440000033468.c.b	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00910000148293	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00910000147084	ENSGT00910000148125	ENSGT00940000161426 #20	ENSGT00910000148293	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Cebidae	ANCESTRAL SPECIES	17	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00910000147084	ENSGT00910000148125	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Marmoset	MODERN SPECIES	3	PLPP4 (ENSCJAG00000006402) #13	ENSCJAG00000013460	ENSCJAG00000087246	BAG3 (ENSCJAG00000020374) #18	ENSCJAG00000020378	INPP5F (ENSCJAG00000020379) #16	MCMBP (ENSCJAG00000020390) #15	SEC23IP (ENSCJAG00000019189) #14	ENSCJAG00000086412	ENSCJAG00000069509	ENSCJAG00000059975	TIAL1 (ENSCJAG00000019682) #19	ENSCJAG00000061556	RGS10 (ENSCJAG00000019675) #20	GRK5 (ENSCJAG00000019648) #21	PRDX3 (ENSCJAG00000019636) #22	SFXN4 (ENSCJAG00000034798) #23	DENND10 (ENSCJAG00000019618) #24	EIF3A (ENSCJAG00000019595) #25	NANOS1 (ENSCJAG00000044351)	ENSCJAG00000063855	CACUL1 (ENSCJAG00000019578) #26	PRLHR (ENSCJAG00000019575)	ENSCJAG00000079572	ENSCJAG00000073481	FAM204A (ENSCJAG00000019565) #27	RAB11FIP2 (ENSCJAG00000019543) #28	EMX2 (ENSCJAG00000038805) #29	PDZD8 (ENSCJAG00000019527) #30	SLC18A2 (ENSCJAG00000019511) #31	KCNK18 (ENSCJAG00000019505) #32
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00390000011476 #7	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00910000147084	ENSGT00910000148125	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Capuchin	MODERN SPECIES	406				SEC23IP (ENSCCAG00000033636) #14	MCMBP (ENSCCAG00000025423) #15	INPP5F (ENSCCAG00000007215) #16	ENSCCAG00000027103 #17	ENSCCAG00000002687	BAG3 (ENSCCAG00000037916) #18	ENSCCAG00000016611	TIAL1 (ENSCCAG00000002561) #19	ENSCCAG00000020677	ENSCCAG00000026113	RGS10 (ENSCCAG00000021937) #20	GRK5 (ENSCCAG00000030340) #21	PRDX3 (ENSCCAG00000035710) #22	SFXN4 (ENSCCAG00000026727) #23	DENND10 (ENSCCAG00000026121) #24	EIF3A (ENSCCAG00000031764) #25	NANOS1 (ENSCCAG00000009164)	ENSCCAG00000014873	CACUL1 (ENSCCAG00000028067) #26	FAM204A (ENSCCAG00000037059) #27	ENSCCAG00000033561	RAB11FIP2 (ENSCCAG00000026414) #28	EMX2 (ENSCCAG00000034395) #29	PDZD8 (ENSCCAG00000022849) #30	SLC18A2 (ENSCCAG00000034263) #31
Bolivian squirrel monkey	MODERN SPECIES	47	NSMCE4A (ENSSBOG00000034475) #7	ATE1 (ENSSBOG00000033557) #9	FGFR2 (ENSSBOG00000016345) #10	WDR11 (ENSSBOG00000034391) #12	PLPP4 (ENSSBOG00000027942) #13	ENSSBOG00000028957	SEC23IP (ENSSBOG00000028088) #14	MCMBP (ENSSBOG00000029485) #15	INPP5F (ENSSBOG00000034456) #16	BAG3 (ENSSBOG00000033183) #18	TIAL1 (ENSSBOG00000028408) #19	ENSSBOG00000028139	RGS10 (ENSSBOG00000023795) #20	GRK5 (ENSSBOG00000025587) #21	ENSSBOG00000034959	PRDX3 (ENSSBOG00000033406) #22	SFXN4 (ENSSBOG00000036043) #23	DENND10 (ENSSBOG00000019475) #24	EIF3A (ENSSBOG00000011487) #25	CACUL1 (ENSSBOG00000024256) #26	PRLHR (ENSSBOG00000018248)	FAM204A (ENSSBOG00000035369) #27	ENSSBOG00000025186	RAB11FIP2 (ENSSBOG00000026692) #28	ENSSBOG00000034022	EMX2 (ENSSBOG00000018880) #29	PDZD8 (ENSSBOG00000034205) #30	SLC18A2 (ENSSBOG00000023886) #31	KCNK18 (ENSSBOG00000024273) #32	VAX1 (ENSSBOG00000030377)	SHTN1 (ENSSBOG00000034777)
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	947				SEC23IP (ENSANAG00000033397) #14	MCMBP (ENSANAG00000030926) #15	INPP5F (ENSANAG00000022163) #16	ENSANAG00000025972	BAG3 (ENSANAG00000030494) #18	ENSANAG00000035957	ENSANAG00000037780	TIAL1 (ENSANAG00000034445) #19	ENSANAG00000035819	RGS10 (ENSANAG00000037765) #20	ENSANAG00000036161	GRK5 (ENSANAG00000037217) #21	ENSANAG00000023590 #22	SFXN4 (ENSANAG00000033027) #23	DENND10 (ENSANAG00000031098) #24	EIF3A (ENSANAG00000022156) #25	CACUL1 (ENSANAG00000034813) #26	PRLHR (ENSANAG00000009074)	FAM204A (ENSANAG00000023847) #27	ENSANAG00000035863	RAB11FIP2 (ENSANAG00000020732) #28	EMX2 (ENSANAG00000019103) #29	PDZD8 (ENSANAG00000034552) #30	SLC18A2 (ENSANAG00000024279) #31	KCNK18 (ENSANAG00000021900) #32	VAX1 (ENSANAG00000025818)	SHTN1 (ENSANAG00000022749)	ENO4 (ENSANAG00000028750) #34
Mas night monkey	MODERN SPECIES	966	KIF20A (ENSANAG00000034059)	CDC23 (ENSANAG00000025991)	GFRA3 (ENSANAG00000023740)	CDC25C (ENSANAG00000023585)	FAM53C (ENSANAG00000021866)	KDM3B (ENSANAG00000033645)	REEP2 (ENSANAG00000025663)	EGR1 (ENSANAG00000023520)	ENSANAG00000023552	ENSANAG00000022006	ENSANAG00000025638	HSPA9 (ENSANAG00000026528)	ENSANAG00000021083	LRRTM2 (ENSANAG00000023394)	ENSANAG00000029972	ENSANAG00000020827 #22	SIL1 (ENSANAG00000019593)	ENSANAG00000026162	ENSANAG00000020892	ENSANAG00000024255	ENSANAG00000022951	ENSANAG00000037702	SLC23A1 (ENSANAG00000021838)	MZB1 (ENSANAG00000021075)	SPATA24 (ENSANAG00000037308)	DNAJC18 (ENSANAG00000021021)	ECSCR (ENSANAG00000037645)	SMIM33 (ENSANAG00000020599)	STING1 (ENSANAG00000037295)	ENSANAG00000037235	CXXC5 (ENSANAG00000037158)
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00440000033468.c.b	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00910000147084	ENSGT00940000161426 #20	ENSGT00910000148293	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00390000011476 #7	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00910000147084	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32
Rhinopithecus	ANCESTRAL SPECIES	34	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926.a.a #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00910000147084	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	1476										ENSRBIG00000039821	BAG3 (ENSRBIG00000032006) #18	ENSRBIG00000036308	TIAL1 (ENSRBIG00000027702) #19	ENSRBIG00000029160	GRK5 (ENSRBIG00000033975) #21	ENSRBIG00000042218 #22	SFXN4 (ENSRBIG00000040840) #23	DENND10 (ENSRBIG00000039084) #24	EIF3A (ENSRBIG00000043106) #25	CACUL1 (ENSRBIG00000038625) #26	PRLHR (ENSRBIG00000028447)	ENSRBIG00000035620 #27	ENSRBIG00000028250
Black snub-nosed monkey	MODERN SPECIES	3254																ENSRBIG00000026737 #22
Golden snub-nosed monkey	MODERN SPECIES	1908						ENSRROG00000038213	SEC23IP (ENSRROG00000035815) #14	MCMBP (ENSRROG00000014769) #15	INPP5F (ENSRROG00000037556) #16	ENSRROG00000044558	BAG3 (ENSRROG00000038656) #18	ENSRROG00000037188	TIAL1 (ENSRROG00000043377) #19	RGS10 (ENSRROG00000030607) #20	GRK5 (ENSRROG00000043736) #21	PRDX3 (ENSRROG00000040925) #22	SFXN4 (ENSRROG00000013169) #23	DENND10 (ENSRROG00000039397) #24	EIF3A (ENSRROG00000045359) #25
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Vervet Monkey	MODERN SPECIES	28	PLEKHA1 (ENSCSAG00000004609)	BTBD16 (ENSCSAG00000004617)	TACC2 (ENSCSAG00000004625)	NSMCE4A (ENSCSAG00000004638) #7	ATE1 (ENSCSAG00000004660) #9	FGFR2 (ENSCSAG00000004685) #10	WDR11 (ENSCSAG00000004694) #12	PLPP4 (ENSCSAG00000004702) #13	SEC23IP (ENSCSAG00000004713) #14	MCMBP (ENSCSAG00000004719) #15	INPP5F (ENSCSAG00000004724) #16	BAG3 (ENSCSAG00000004728) #18	TIAL1 (ENSCSAG00000004734) #19	RGS10 (ENSCSAG00000004742) #20	GRK5 (ENSCSAG00000004748) #21	PRDX3 (ENSCSAG00000004753) #22	SFXN4 (ENSCSAG00000004756) #23	ENSCSAG00000004768 #24	EIF3A (ENSCSAG00000004777) #25	CACUL1 (ENSCSAG00000004782) #26	FAM204A (ENSCSAG00000004787) #27	RAB11FIP2 (ENSCSAG00000004789) #28	EMX2 (ENSCSAG00000004790) #29	PDZD8 (ENSCSAG00000004795) #30	SLC18A2 (ENSCSAG00000004801) #31	KCNK18 (ENSCSAG00000004806) #32	VAX1 (ENSCSAG00000004808)	SHTN1 (ENSCSAG00000004814)	ENO4 (ENSCSAG00000004820) #34	HSPA12A (ENSCSAG00000004829) #33	ENSCSAG00000004831
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00390000011476 #7	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00940000173066	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Cercopithecinae_d	ANCESTRAL SPECIES	64	ENSGT00390000011476 #7	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00940000173066	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Drill	MODERN SPECIES	1373	TACC2 (ENSMLEG00000044190)	NSMCE4A (ENSMLEG00000024885) #7	ATE1 (ENSMLEG00000029782) #9	FGFR2 (ENSMLEG00000027189) #10	WDR11 (ENSMLEG00000041010) #12	PLPP4 (ENSMLEG00000039049) #13	SEC23IP (ENSMLEG00000030208) #14	MCMBP (ENSMLEG00000037646) #15	INPP5F (ENSMLEG00000008038) #16	BAG3 (ENSMLEG00000040350) #18	ENSMLEG00000042707	ENSMLEG00000036021	TIAL1 (ENSMLEG00000034719) #19	RGS10 (ENSMLEG00000028058) #20	GRK5 (ENSMLEG00000015118) #21	PRDX3 (ENSMLEG00000038508) #22	SFXN4 (ENSMLEG00000044253) #23	DENND10 (ENSMLEG00000025579) #24	EIF3A (ENSMLEG00000032044) #25	CACUL1 (ENSMLEG00000011976) #26	ENSMLEG00000042362	PRLHR (ENSMLEG00000014684)	FAM204A (ENSMLEG00000007355) #27	ENSMLEG00000005933	RAB11FIP2 (ENSMLEG00000040520) #28	EMX2 (ENSMLEG00000039220) #29	PDZD8 (ENSMLEG00000033950) #30	SLC18A2 (ENSMLEG00000033472) #31	KCNK18 (ENSMLEG00000043402) #32	ENSMLEG00000030765	SHTN1 (ENSMLEG00000034796)
Sooty mangabey	MODERN SPECIES	527	NSMCE4A (ENSCATG00000037970) #7	ATE1 (ENSCATG00000039070) #9	FGFR2 (ENSCATG00000037271) #10	WDR11 (ENSCATG00000043471) #12	PLPP4 (ENSCATG00000008532) #13	ENSCATG00000039059	SEC23IP (ENSCATG00000031879) #14	MCMBP (ENSCATG00000035237) #15	INPP5F (ENSCATG00000016832) #16	ENSCATG00000036096	BAG3 (ENSCATG00000043521) #18	ENSCATG00000042161	TIAL1 (ENSCATG00000043838) #19	RGS10 (ENSCATG00000032717) #20	GRK5 (ENSCATG00000025277) #21	PRDX3 (ENSCATG00000041288) #22	SFXN4 (ENSCATG00000038203) #23	DENND10 (ENSCATG00000044731) #24	EIF3A (ENSCATG00000037599) #25	NANOS1 (ENSCATG00000000994)	CACUL1 (ENSCATG00000021798) #26	PRLHR (ENSCATG00000016413)	FAM204A (ENSCATG00000040275) #27	ENSCATG00000013004	RAB11FIP2 (ENSCATG00000040177) #28	EMX2 (ENSCATG00000038621) #29	PDZD8 (ENSCATG00000036913) #30	SLC18A2 (ENSCATG00000035848) #31	KCNK18 (ENSCATG00000031895) #32	VAX1 (ENSCATG00000036567)	SHTN1 (ENSCATG00000018341)
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00390000011476 #7	ENSGT00500000044926.b #9	ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.b.b.b.a.b.a.b.b.a	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000161627.a.a.a.b.b.b.a.a.a.a.c.a	ENSGT00390000012433.a.a.a.a.b	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT01100000263508.A.d.e.b.a.c.b.c.a.b.a.a.b.a	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978.q.a.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000166143.A.a.b.a.a.a.a	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32
Rhesus	MODERN SPECIES	19	ENSMMUG00000064557	ENSMMUG00000064321	PLPP4 (ENSMMUG00000008724) #13	SEC23IP (ENSMMUG00000009561) #14	ENSMMUG00000065302	MCMBP (ENSMMUG00000009559) #15	INPP5F (ENSMMUG00000009558) #16	BAG3 (ENSMMUG00000000798) #18	ENSMMUG00000049613	ENSMMUG00000051594	TIAL1 (ENSMMUG00000001472) #19	ENSMMUG00000054942	RGS10 (ENSMMUG00000021610) #20	GRK5 (ENSMMUG00000004596) #21	ENSMMUG00000063441	PRDX3 (ENSMMUG00000008294) #22	SFXN4 (ENSMMUG00000008291) #23	DENND10 (ENSMMUG00000008289) #24	EIF3A (ENSMMUG00000008994) #25	NANOS1 (ENSMMUG00000048654)	ENSMMUG00000061613	ENSMMUG00000062698	CACUL1 (ENSMMUG00000016370) #26	PRLHR (ENSMMUG00000052816)	FAM204A (ENSMMUG00000012741) #27	ENSMMUG00000041447	RAB11FIP2 (ENSMMUG00000021805) #28	ENSMMUG00000062119	EMX2 (ENSMMUG00000060255) #29	PDZD8 (ENSMMUG00000053348) #30	SLC18A2 (ENSMMUG00000014817) #31
Crab-eating macaque	MODERN SPECIES	19	ENSMFAG00000065246	ENSMFAG00000062414	ENSMFAG00000037481 #13	SEC23IP (ENSMFAG00000042549) #14	MCMBP (ENSMFAG00000000064) #15	INPP5F (ENSMFAG00000042323) #16	BAG3 (ENSMFAG00000035851) #18	ENSMFAG00000050052	ENSMFAG00000063730	TIAL1 (ENSMFAG00000002789) #19	ENSMFAG00000049112	ENSMFAG00000047317	RGS10 (ENSMFAG00000035933) #20	GRK5 (ENSMFAG00000000421) #21	SFXN4 (ENSMFAG00000043135) #23	PRDX3 (ENSMFAG00000039826) #22	DENND10 (ENSMFAG00000055072) #24	EIF3A (ENSMFAG00000032082) #25	ENSMFAG00000053432	CACUL1 (ENSMFAG00000056962) #26	PRLHR (ENSMFAG00000030136)	FAM204A (ENSMFAG00000031620) #27	RAB11FIP2 (ENSMFAG00000000822) #28	ENSMFAG00000056699	EMX2 (ENSMFAG00000062794) #29	PDZD8 (ENSMFAG00000037170) #30	SLC18A2 (ENSMFAG00000031383) #31	KCNK18 (ENSMFAG00000045802) #32	VAX1 (ENSMFAG00000044674)	ENSMFAG00000048457	SHTN1 (ENSMFAG00000042541)
Pig-tailed macaque	DUPLICATION
Pig-tailed macaque	MODERN SPECIES	90							PLPP4 (ENSMNEG00000036322) #13	SEC23IP (ENSMNEG00000045086) #14	MCMBP (ENSMNEG00000039601) #15	INPP5F (ENSMNEG00000032634) #16	BAG3 (ENSMNEG00000042888) #18	ENSMNEG00000039985	TIAL1 (ENSMNEG00000032245) #19	RGS10 (ENSMNEG00000038381) #20	GRK5 (ENSMNEG00000041526) #21	ENSMNEG00000043574 #22	SFXN4 (ENSMNEG00000041851) #23	ENSMNEG00000036385 #24	EIF3A (ENSMNEG00000018271) #25	NANOS1 (ENSMNEG00000022527)	CACUL1 (ENSMNEG00000035853) #26	ENSMNEG00000029432	PRLHR (ENSMNEG00000036983)	FAM204A (ENSMNEG00000042700) #27	ENSMNEG00000032884	RAB11FIP2 (ENSMNEG00000032231) #28	EMX2 (ENSMNEG00000027592) #29	PDZD8 (ENSMNEG00000045026) #30	SLC18A2 (ENSMNEG00000008691) #31	KCNK18 (ENSMNEG00000037673) #32	VAX1 (ENSMNEG00000042756)
Pig-tailed macaque	MODERN SPECIES	517	ENSMNEG00000009689	ENSMNEG00000026858	ENSMNEG00000028899	ENSMNEG00000037055	ENSMNEG00000038165	ENSMNEG00000031657	SYT1 (ENSMNEG00000030551)	PAWR (ENSMNEG00000004020)	PPP1R12A (ENSMNEG00000033679)	OTOGL (ENSMNEG00000034772)	PTPRQ (ENSMNEG00000045562)	MYF6 (ENSMNEG00000019739)	MYF5 (ENSMNEG00000039510)	LIN7A (ENSMNEG00000040769)	ACSS3 (ENSMNEG00000030423)	ENSMNEG00000021297 #22	PPFIA2 (ENSMNEG00000041825)	CCDC59 (ENSMNEG00000037462)	METTL25 (ENSMNEG00000042500)	TMTC2 (ENSMNEG00000028808)	ENSMNEG00000032829	SLC6A15 (ENSMNEG00000005563)	TSPAN19 (ENSMNEG00000036225)	LRRIQ1 (ENSMNEG00000037379)	ALX1 (ENSMNEG00000034993)	ENSMNEG00000000984	RASSF9 (ENSMNEG00000033486)	NTS (ENSMNEG00000040065)	MGAT4C (ENSMNEG00000029200)
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00910000147084	ENSGT00940000161426 #20	ENSGT00910000148293	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Hominidae	ANCESTRAL SPECIES	13	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00910000147084	ENSGT00940000161426 #20	ENSGT00910000148293	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00910000147084	ENSGT00940000161426 #20	ENSGT00910000148293	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00390000011476 #7	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00910000147084	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Pan	ANCESTRAL SPECIES	16	ENSGT00390000011476 #7	ENSGT00500000044926.b #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000154259.k.a	ENSGT00940000159204 #18	ENSGT00500000044913.b	ENSGT00940000160482 #19	ENSGT00910000147084	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.r #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000016475.e.a.a.a	ENSGT00940000162008	ENSGT00390000008978.q.a #27	ENSGT00390000010476	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152
Chimpanzee	MODERN SPECIES	1	ATE1 (ENSPTRG00000003005) #9	FGFR2 (ENSPTRG00000003003) #10	WDR11 (ENSPTRG00000003004) #12	PLPP4 (ENSPTRG00000029684) #13	ENSPTRG00000048120	SEC23IP (ENSPTRG00000003001) #14	MCMBP (ENSPTRG00000003000) #15	INPP5F (ENSPTRG00000022873) #16	ENSPTRG00000051748	BAG3 (ENSPTRG00000002998) #18	ENSPTRG00000040193	ENSPTRG00000046181	TIAL1 (ENSPTRG00000002996) #19	RGS10 (ENSPTRG00000002995) #20	GRK5 (ENSPTRG00000002993) #21	PRDX3 (ENSPTRG00000002992) #22	SFXN4 (ENSPTRG00000002990) #23	DENND10 (ENSPTRG00000002989) #24	EIF3A (ENSPTRG00000002988) #25	NANOS1 (ENSPTRG00000013314)	CACUL1 (ENSPTRG00000002986) #26	ENSPTRG00000049526	PRLHR (ENSPTRG00000002985)	FAM204A (ENSPTRG00000002984) #27	ENSPTRG00000046689	RAB11FIP2 (ENSPTRG00000002982) #28	EMX2 (ENSPTRG00000002981) #29	PDZD8 (ENSPTRG00000002980) #30	SLC18A2 (ENSPTRG00000002979) #31	KCNK18 (ENSPTRG00000002978) #32	VAX1 (ENSPTRG00000045431)
Bonobo	MODERN SPECIES	1	ENSPPAG00000035638 #7	ATE1 (ENSPPAG00000039734) #9	FGFR2 (ENSPPAG00000034123) #10	WDR11 (ENSPPAG00000034753) #12	PLPP4 (ENSPPAG00000040406) #13	ENSPPAG00000035383	SEC23IP (ENSPPAG00000021343) #14	MCMBP (ENSPPAG00000041372) #15	INPP5F (ENSPPAG00000028448) #16	ENSPPAG00000030508	BAG3 (ENSPPAG00000042723) #18	ENSPPAG00000036209	TIAL1 (ENSPPAG00000043098) #19	RGS10 (ENSPPAG00000028477) #20	GRK5 (ENSPPAG00000028552) #21	PRDX3 (ENSPPAG00000029603) #22	SFXN4 (ENSPPAG00000035782) #23	DENND10 (ENSPPAG00000027869) #24	EIF3A (ENSPPAG00000028284) #25	ENSPPAG00000033515 #26	PRLHR (ENSPPAG00000002478)	FAM204A (ENSPPAG00000013679) #27	ENSPPAG00000011351	RAB11FIP2 (ENSPPAG00000014110) #28	EMX2 (ENSPPAG00000028273) #29	PDZD8 (ENSPPAG00000043171) #30	SLC18A2 (ENSPPAG00000018149) #31	KCNK18 (ENSPPAG00000042750) #32	ENSPPAG00000029176	SHTN1 (ENSPPAG00000042929)	ENO4 (ENSPPAG00000035101) #34
Human	MODERN SPECIES	1	PLEKHA1 (ENSG00000107679)	BTBD16 (ENSG00000138152)	TACC2 (ENSG00000138162)	NSMCE4A (ENSG00000107672) #7	ATE1 (ENSG00000107669) #9	FGFR2 (ENSG00000066468) #10	WDR11 (ENSG00000120008) #12	PLPP4 (ENSG00000203805) #13	SEC23IP (ENSG00000107651) #14	MCMBP (ENSG00000197771) #15	INPP5F (ENSG00000198825) #16	BAG3 (ENSG00000151929) #18	TIAL1 (ENSG00000151923) #19	RGS10 (ENSG00000148908) #20	GRK5 (ENSG00000198873) #21	PRDX3 (ENSG00000165672) #22	SFXN4 (ENSG00000183605) #23	DENND10 (ENSG00000119979) #24	EIF3A (ENSG00000107581) #25	NANOS1 (ENSG00000188613)	CACUL1 (ENSG00000151893) #26	PRLHR (ENSG00000119973)	FAM204A (ENSG00000165669) #27	RAB11FIP2 (ENSG00000107560) #28	EMX2 (ENSG00000170370) #29	PDZD8 (ENSG00000165650) #30	SLC18A2 (ENSG00000165646) #31	KCNK18 (ENSG00000186795) #32	VAX1 (ENSG00000148704)	SHTN1 (ENSG00000187164)	ENO4 (ENSG00000188316) #34
Gorilla	MODERN SPECIES	1	ENSGGOG00000024510	WDR11 (ENSGGOG00000003069) #12	ENSGGOG00000011322 #13	ENSGGOG00000025941	SEC23IP (ENSGGOG00000003921) #14	MCMBP (ENSGGOG00000006006) #15	INPP5F (ENSGGOG00000005991) #16	ENSGGOG00000022627	BAG3 (ENSGGOG00000011503) #18	ENSGGOG00000024741	TIAL1 (ENSGGOG00000001816) #19	ENSGGOG00000041190	RGS10 (ENSGGOG00000008414) #20	ENSGGOG00000042904	GRK5 (ENSGGOG00000011618) #21	PRDX3 (ENSGGOG00000026364) #22	SFXN4 (ENSGGOG00000036305) #23	DENND10 (ENSGGOG00000000888) #24	EIF3A (ENSGGOG00000000036) #25	CACUL1 (ENSGGOG00000001450) #26	ENSGGOG00000028013	PRLHR (ENSGGOG00000000672)	FAM204A (ENSGGOG00000010566) #27	ENSGGOG00000037446	RAB11FIP2 (ENSGGOG00000007213) #28	EMX2 (ENSGGOG00000016667) #29	PDZD8 (ENSGGOG00000002530) #30	SLC18A2 (ENSGGOG00000004379) #31	KCNK18 (ENSGGOG00000027386) #32	ENSGGOG00000037135	SHTN1 (ENSGGOG00000012508)
Orangutan	MODERN SPECIES	1	ATE1 (ENSPPYG00000002711) #9	FGFR2 (ENSPPYG00000002710) #10	WDR11 (ENSPPYG00000029859) #12	PLPP4 (ENSPPYG00000002709) #13	ENSPPYG00000030022	SEC23IP (ENSPPYG00000002708) #14	MCMBP (ENSPPYG00000002707) #15	INPP5F (ENSPPYG00000002706) #16	ENSPPYG00000031900	BAG3 (ENSPPYG00000002705) #18	TIAL1 (ENSPPYG00000002703) #19	ENSPPYG00000037360	ENSPPYG00000002702 #20	ENSPPYG00000036653	GRK5 (ENSPPYG00000002701) #21	PRDX3 (ENSPPYG00000002700) #22	SFXN4 (ENSPPYG00000002699) #23	DENND10 (ENSPPYG00000002698) #24	EIF3A (ENSPPYG00000002697) #25	NANOS1 (ENSPPYG00000036681)	CACUL1 (ENSPPYG00000031630) #26	PRLHR (ENSPPYG00000002695)	FAM204A (ENSPPYG00000002694) #27	ENSPPYG00000002693	RAB11FIP2 (ENSPPYG00000002692) #28	ENSPPYG00000031065 #29	PDZD8 (ENSPPYG00000039905) #30	SLC18A2 (ENSPPYG00000002690) #31	KCNK18 (ENSPPYG00000002689) #32	VAX1 (ENSPPYG00000002688)	SHTN1 (ENSPPYG00000002687)
Gibbon	MODERN SPECIES	18	BTBD16 (ENSNLEG00000016981)	TACC2 (ENSNLEG00000016926)	NSMCE4A (ENSNLEG00000016919) #7	ATE1 (ENSNLEG00000016908) #9	FGFR2 (ENSNLEG00000016854) #10	WDR11 (ENSNLEG00000016815) #12	PLPP4 (ENSNLEG00000028427) #13	SEC23IP (ENSNLEG00000016780) #14	MCMBP (ENSNLEG00000016770) #15	INPP5F (ENSNLEG00000016753) #16	ENSNLEG00000029480	BAG3 (ENSNLEG00000016750) #18	TIAL1 (ENSNLEG00000016743) #19	RGS10 (ENSNLEG00000035071) #20	GRK5 (ENSNLEG00000016723) #21	PRDX3 (ENSNLEG00000035268) #22	SFXN4 (ENSNLEG00000016685) #23	DENND10 (ENSNLEG00000032443) #24	EIF3A (ENSNLEG00000016648) #25	CACUL1 (ENSNLEG00000033485) #26	ENSNLEG00000036076	PRLHR (ENSNLEG00000016637)	FAM204A (ENSNLEG00000016624) #27	ENSNLEG00000031592	ENSNLEG00000016621	RAB11FIP2 (ENSNLEG00000016607) #28	EMX2 (ENSNLEG00000028193) #29	ENSNLEG00000027748 #30	SLC18A2 (ENSNLEG00000016568) #31	KCNK18 (ENSNLEG00000016567) #32	VAX1 (ENSNLEG00000032960)
Tarsier	MODERN SPECIES	7109												BAG3 (ENSTSYG00000025987) #18	TIAL1 (ENSTSYG00000004348) #19	RGS10 (ENSTSYG00000008954) #20	GRK5 (ENSTSYG00000005323) #21	PRDX3 (ENSTSYG00000006384) #22	SFXN4 (ENSTSYG00000014016) #23	DENND10 (ENSTSYG00000010153) #24	EIF3A (ENSTSYG00000010443) #25	ENSTSYG00000031848	ENSTSYG00000034685	ENSTSYG00000034422	CACUL1 (ENSTSYG00000008510) #26
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482.n #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482.n #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Lemuriformes_a	ANCESTRAL SPECIES	42	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482.n #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Greater bamboo lemur	MODERN SPECIES	193	ENSPSMG00000008723	ENSPSMG00000008933	NSMCE4A (ENSPSMG00000008948) #7	ENSPSMG00000008956 #8	ATE1 (ENSPSMG00000009100) #9	FGFR2 (ENSPSMG00000009785) #10	WDR11 (ENSPSMG00000010687) #12	PLPP4 (ENSPSMG00000010705) #13	SEC23IP (ENSPSMG00000010732) #14	MCMBP (ENSPSMG00000010773) #15	INPP5F (ENSPSMG00000010892) #16	BAG3 (ENSPSMG00000010989) #18	TIAL1 (ENSPSMG00000011113) #19	ENSPSMG00000011218	GRK5 (ENSPSMG00000011313) #21	PRDX3 (ENSPSMG00000011358) #22	SFXN4 (ENSPSMG00000011378) #23	DENND10 (ENSPSMG00000011392) #24	EIF3A (ENSPSMG00000011410) #25	NANOS1 (ENSPSMG00000011420)
Coquerels sifaka	MODERN SPECIES	258	HTRA1 (ENSPCOG00000021590)	PLEKHA1 (ENSPCOG00000027097)	BTBD16 (ENSPCOG00000020204)	ENSPCOG00000026897	NSMCE4A (ENSPCOG00000011420) #7	ATE1 (ENSPCOG00000026224) #9	FGFR2 (ENSPCOG00000027873) #10	WDR11 (ENSPCOG00000019354) #12	PLPP4 (ENSPCOG00000025706) #13	MCMBP (ENSPCOG00000020444) #15	INPP5F (ENSPCOG00000015152) #16	BAG3 (ENSPCOG00000027192) #18	TIAL1 (ENSPCOG00000018990) #19	RGS10 (ENSPCOG00000020094) #20	GRK5 (ENSPCOG00000022845) #21	PRDX3 (ENSPCOG00000024919) #22	SFXN4 (ENSPCOG00000027384) #23	DENND10 (ENSPCOG00000000559) #24	EIF3A (ENSPCOG00000026400) #25	NANOS1 (ENSPCOG00000009467)	CACUL1 (ENSPCOG00000020700) #26	FAM204A (ENSPCOG00000022324) #27	RAB11FIP2 (ENSPCOG00000024340) #28	EMX2 (ENSPCOG00000026272) #29	PDZD8 (ENSPCOG00000007150) #30	SLC18A2 (ENSPCOG00000024529) #31	KCNK18 (ENSPCOG00000020687) #32	VAX1 (ENSPCOG00000027093)	SHTN1 (ENSPCOG00000026334)	ENO4 (ENSPCOG00000016591) #34
Mouse lemur	MODERN SPECIES	6	BTBD16 (ENSMICG00000009849)	TACC2 (ENSMICG00000009830)	NSMCE4A (ENSMICG00000042455) #7	ATE1 (ENSMICG00000009823) #9	FGFR2 (ENSMICG00000000424) #10	WDR11 (ENSMICG00000008892) #12	PLPP4 (ENSMICG00000008887) #13	ENSMICG00000037953	SEC23IP (ENSMICG00000007551) #14	MCMBP (ENSMICG00000007540) #15	INPP5F (ENSMICG00000007525) #16	BAG3 (ENSMICG00000027251) #18	TIAL1 (ENSMICG00000037857) #19	ENSMICG00000005524	GRK5 (ENSMICG00000007635) #21	PRDX3 (ENSMICG00000007627) #22	SFXN4 (ENSMICG00000007614) #23	DENND10 (ENSMICG00000026438) #24	EIF3A (ENSMICG00000007588) #25	CACUL1 (ENSMICG00000007500) #26	ENSMICG00000026357	FAM204A (ENSMICG00000046536) #27	RAB11FIP2 (ENSMICG00000001976) #28	EMX2 (ENSMICG00000015676) #29	PDZD8 (ENSMICG00000032374) #30	SLC18A2 (ENSMICG00000047075) #31	KCNK18 (ENSMICG00000015645) #32	VAX1 (ENSMICG00000036933)	SHTN1 (ENSMICG00000015629)	ENO4 (ENSMICG00000015619) #34	HSPA12A (ENSMICG00000015608) #33
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	292												ENSOGAG00000034614	ANXA10 (ENSOGAG00000007053)	SPOCK3 (ENSOGAG00000002571)	TLL1 (ENSOGAG00000011582)	ENSOGAG00000024583 #22	CPE (ENSOGAG00000008219)	ENSOGAG00000009281	KLHL2 (ENSOGAG00000009276)	TMEM192 (ENSOGAG00000013815)	TRIM75 (ENSOGAG00000013813)
Bushbaby	MODERN SPECIES	136	TACC2 (ENSOGAG00000010030)	NSMCE4A (ENSOGAG00000010026) #7	ENSOGAG00000031150 #8	ATE1 (ENSOGAG00000010023) #9	FGFR2 (ENSOGAG00000012206) #10	WDR11 (ENSOGAG00000012465) #12	PLPP4 (ENSOGAG00000016998) #13	SEC23IP (ENSOGAG00000004948) #14	MCMBP (ENSOGAG00000009714) #15	INPP5F (ENSOGAG00000009706) #16	BAG3 (ENSOGAG00000011421) #18	ENSOGAG00000011419	TIAL1 (ENSOGAG00000011417) #19	RGS10 (ENSOGAG00000030571) #20	GRK5 (ENSOGAG00000002075) #21	ENSOGAG00000002074 #22	ENSOGAG00000027987	DENND10 (ENSOGAG00000002070) #24	EIF3A (ENSOGAG00000004580) #25	NANOS1 (ENSOGAG00000033947)	CACUL1 (ENSOGAG00000006769) #26	PRLHR (ENSOGAG00000025256)	FAM204A (ENSOGAG00000028541) #27	RAB11FIP2 (ENSOGAG00000012716) #28	EMX2 (ENSOGAG00000007277) #29	PDZD8 (ENSOGAG00000028529) #30	SLC18A2 (ENSOGAG00000034086) #31	KCNK18 (ENSOGAG00000007264) #32	VAX1 (ENSOGAG00000030974)	SHTN1 (ENSOGAG00000003447)	ENO4 (ENSOGAG00000003444) #34
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Tree shrew	MODERN SPECIES	210															GRK5 (ENSTBEG00000011474) #21	PRDX3 (ENSTBEG00000011064) #22	SFXN4 (ENSTBEG00000010813) #23	DENND10 (ENSTBEG00000010597) #24	EIF3A (ENSTBEG00000010162) #25
Glires	ANCESTRAL SPECIES	16	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Rodentia	ANCESTRAL SPECIES	16	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602.g.a #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602.g.a #14	ENSGT00940000156602.g.b #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602.g.a #14	ENSGT00940000156602.g.b #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Muroidea_A	ANCESTRAL SPECIES																ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Cricetidae	ANCESTRAL SPECIES	1															ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
Cricetinae	ANCESTRAL SPECIES	2															ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
Chinese hamster chok1gshd	MODERN SPECIES	215														ENSCGRG00001001599	Grk5 (ENSCGRG00001014639) #21	Prdx3 (ENSCGRG00001015353) #22	Dennd10 (ENSCGRG00001016270) #24	Eif3a (ENSCGRG00001003836) #25	Nanos1 (ENSCGRG00001007664)	Cacul1 (ENSCGRG00001010443) #26	Prlhr (ENSCGRG00001015600)	ENSCGRG00001012074	Fam204a (ENSCGRG00001012697) #27	Rab11fip2 (ENSCGRG00001013387) #28	ENSCGRG00001014214	Emx2 (ENSCGRG00001014676) #29	Pdzd8 (ENSCGRG00001015249) #30	Slc18a2 (ENSCGRG00001016186) #31	Kcnk18 (ENSCGRG00001016865) #32	Vax1 (ENSCGRG00001017524)	Shtn1 (ENSCGRG00001018919)
Golden Hamster	MODERN SPECIES	805											ENSMAUG00000001295	ENSMAUG00000004089	ENSMAUG00000016784	ENSMAUG00000021683	Grk5 (ENSMAUG00000000694) #21	Prdx3 (ENSMAUG00000021294) #22	Dennd10 (ENSMAUG00000015359) #24	Nanos1 (ENSMAUG00000021200)	Eif3a (ENSMAUG00000012616) #25	Cacul1 (ENSMAUG00000016607) #26	Prlhr (ENSMAUG00000019749)	Fam204a (ENSMAUG00000008150) #27	Rab11fip2 (ENSMAUG00000013610) #28	Emx2 (ENSMAUG00000009270) #29	Pdzd8 (ENSMAUG00000012851) #30	Slc18a2 (ENSMAUG00000009506) #31	Vax1 (ENSMAUG00000010122)	ENSMAUG00000012535	Eno4 (ENSMAUG00000009399) #34	Hspa12a (ENSMAUG00000003739) #33	1700019N19Rik (ENSMAUG00000011699) #35
Cricetidae_B	ANCESTRAL SPECIES	1															ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
Prairie vole	MODERN SPECIES	16															Grk5 (ENSMOCG00000001669) #21	Prdx3 (ENSMOCG00000013290) #22	Dennd10 (ENSMOCG00000012284) #24	Eif3a (ENSMOCG00000002406) #25	Nanos1 (ENSMOCG00000007708)	Cacul1 (ENSMOCG00000005008) #26	Prlhr (ENSMOCG00000001307)	ENSMOCG00000006709 #27	Rab11fip2 (ENSMOCG00000004019) #28	Emx2 (ENSMOCG00000019514) #29	Pdzd8 (ENSMOCG00000010922) #30	Slc18a2 (ENSMOCG00000013802) #31	Kcnk18 (ENSMOCG00000003123) #32	Vax1 (ENSMOCG00000008001)	Shtn1 (ENSMOCG00000012289)	Eno4 (ENSMOCG00000008352) #34	Hspa12a (ENSMOCG00000000721) #33
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000031413	Habp2 (ENSPEMG00000011718)	Nrap (ENSPEMG00000005107)	Casp7 (ENSPEMG00000026293)	Plekhs1 (ENSPEMG00000000342)	Dclre1a (ENSPEMG00000010861)	Nhlrc2 (ENSPEMG00000013954)	Adrb1 (ENSPEMG00000014645)	Ccdc186 (ENSPEMG00000000425)	Tdrd1 (ENSPEMG00000004582)	Vwa2 (ENSPEMG00000017216)	Afap1l2 (ENSPEMG00000000090)	Ablim1 (ENSPEMG00000016085)	Grk5 (ENSPEMG00000017149) #21	ENSPEMG00000000210	Prdx3 (ENSPEMG00000009413) #22	Dennd10 (ENSPEMG00000009587) #24	Eif3a (ENSPEMG00000000086) #25	Nanos1 (ENSPEMG00000019116)	Cacul1 (ENSPEMG00000028052) #26	Prlhr (ENSPEMG00000014534)	Fam204a (ENSPEMG00000001885) #27	Rab11fip2 (ENSPEMG00000000413) #28	Emx2 (ENSPEMG00000017271) #29	Pdzd8 (ENSPEMG00000010555) #30	Slc18a2 (ENSPEMG00000008504) #31	Kcnk18 (ENSPEMG00000009989) #32	Vax1 (ENSPEMG00000008665)	Shtn1 (ENSPEMG00000007069)	Eno4 (ENSPEMG00000018141) #34	Hspa12a (ENSPEMG00000002037) #33
Murinae	ANCESTRAL SPECIES															ENSGT00940000153805.q.b.a.a.a.a.a.a.a.b	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Mus	ANCESTRAL SPECIES															ENSGT00940000153805.q.b.a.a.a.a.a.a.a.b	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Mus_A	ANCESTRAL SPECIES	16														ENSGT00940000153805.q.b.a.a.a.a.a.a.a.b	ENSGT00940000160702.b.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Mus_B	ANCESTRAL SPECIES	16														ENSGT00940000153805.q.b.a.a.a.a.a.a.a.b	ENSGT00940000160702.b.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Mouse	MODERN SPECIES	10												Csf2ra (ENSMUSG00000059326)	Gm7102 (ENSMUSG00000094649)	Zfp950 (ENSMUSG00000074733)	Grk5 (ENSMUSG00000003228) #21	Prdx3 (ENSMUSG00000024997) #22	Sfxn4 (ENSMUSG00000063698) #23	Dennd10 (ENSMUSG00000024993) #24	Eif3a (ENSMUSG00000024991) #25	Nanos1 (ENSMUSG00000072437)	Cacul1 (ENSMUSG00000033417) #26	Prlhr (ENSMUSG00000045052)	Fam204a (ENSMUSG00000057858) #27	Rab11fip2 (ENSMUSG00000040022) #28	Emx2 (ENSMUSG00000043969) #29	Pdzd8 (ENSMUSG00000074746) #30	Slc18a2 (ENSMUSG00000025094) #31	Kcnk18 (ENSMUSG00000040901) #32	Vax1 (ENSMUSG00000006270)	Shtn1 (ENSMUSG00000041362)	Eno4 (ENSMUSG00000048029) #34
Mus_C	ANCESTRAL SPECIES	24														ENSGT00940000153805.q.b.a.a.a.a.a.a.a.b	ENSGT00940000160702.b.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Steppe mouse	MODERN SPECIES	38													Zfp950 (ENSMSIG00000028121)	Grk5 (ENSMSIG00000028137) #21	ENSMSIG00000028146	Prdx3 (ENSMSIG00000028149) #22	Sfxn4 (ENSMSIG00000028157) #23	Dennd10 (ENSMSIG00000028163) #24	ENSMSIG00000028172	Eif3a (ENSMSIG00000028178) #25	Nanos1 (ENSMSIG00000028205)	Cacul1 (ENSMSIG00000028208) #26	Prlhr (ENSMSIG00000028226)	Fam204a (ENSMSIG00000028227) #27	Rab11fip2 (ENSMSIG00000028250) #28	Emx2 (ENSMSIG00000028276) #29	Pdzd8 (ENSMSIG00000028285) #30	Slc18a2 (ENSMSIG00000028291) #31	Kcnk18 (ENSMSIG00000028309) #32	ENSMSIG00000028314	Vax1 (ENSMSIG00000028320)
spretus	MODERN SPECIES	10													Csf2ra (MGP_SPRETEiJ_G0024048)	Zfp950 (MGP_SPRETEiJ_G0024047)	Grk5 (MGP_SPRETEiJ_G0024046) #21	Prdx3 (MGP_SPRETEiJ_G0024045) #22	Sfxn4 (MGP_SPRETEiJ_G0024044) #23	Dennd10 (MGP_SPRETEiJ_G0024043) #24	Eif3a (MGP_SPRETEiJ_G0024042) #25	Nanos1 (MGP_SPRETEiJ_G0024041)	Cacul1 (MGP_SPRETEiJ_G0024040) #26	Prlhr (MGP_SPRETEiJ_G0024039)	Fam204a (MGP_SPRETEiJ_G0024038) #27	Rab11fip2 (MGP_SPRETEiJ_G0024037) #28	Emx2 (MGP_SPRETEiJ_G0024036) #29	Pdzd8 (MGP_SPRETEiJ_G0024035) #30	Slc18a2 (MGP_SPRETEiJ_G0024034) #31	Kcnk18 (MGP_SPRETEiJ_G0024033) #32	Vax1 (MGP_SPRETEiJ_G0024032)	Shtn1 (MGP_SPRETEiJ_G0024031)	Eno4 (MGP_SPRETEiJ_G0024030) #34
Ryukyu mouse	MODERN SPECIES	10													Csf2ra (MGP_CAROLIEiJ_G0023127)	Zfp950 (MGP_CAROLIEiJ_G0023126)	Grk5 (MGP_CAROLIEiJ_G0023125) #21	Prdx3 (MGP_CAROLIEiJ_G0023124) #22	Sfxn4 (MGP_CAROLIEiJ_G0023123) #23	Dennd10 (MGP_CAROLIEiJ_G0023122) #24	Eif3a (MGP_CAROLIEiJ_G0023121) #25	Nanos1 (MGP_CAROLIEiJ_G0023120)	MGP_CAROLIEiJ_G0023119 #26	Prlhr (MGP_CAROLIEiJ_G0023118)	Fam204a (MGP_CAROLIEiJ_G0023117) #27	Rab11fip2 (MGP_CAROLIEiJ_G0023116) #28	Emx2 (MGP_CAROLIEiJ_G0023115) #29	Pdzd8 (MGP_CAROLIEiJ_G0023114) #30	Slc18a2 (MGP_CAROLIEiJ_G0023113) #31	Kcnk18 (MGP_CAROLIEiJ_G0023112) #32	Vax1 (MGP_CAROLIEiJ_G0023111)	Shtn1 (MGP_CAROLIEiJ_G0023110)	Eno4 (MGP_CAROLIEiJ_G0023109) #34
Shrew mouse	MODERN SPECIES															MGP_PahariEiJ_G0014614	Grk5 (MGP_PahariEiJ_G0014613) #21	Prdx3 (MGP_PahariEiJ_G0014612) #22	Sfxn4 (MGP_PahariEiJ_G0014611) #23	Dennd10 (MGP_PahariEiJ_G0014610) #24	Eif3a (MGP_PahariEiJ_G0014609) #25	Nanos1 (MGP_PahariEiJ_G0014608)	Cacul1 (MGP_PahariEiJ_G0014607) #26	Prlhr (MGP_PahariEiJ_G0014606)	Fam204a (MGP_PahariEiJ_G0014605) #27	Rab11fip2 (MGP_PahariEiJ_G0014604) #28	Emx2 (MGP_PahariEiJ_G0014603) #29	Pdzd8 (MGP_PahariEiJ_G0014602) #30	Slc18a2 (MGP_PahariEiJ_G0014601) #31	Kcnk18 (MGP_PahariEiJ_G0014600) #32	Vax1 (MGP_PahariEiJ_G0014599)	Shtn1 (MGP_PahariEiJ_G0014598)	Eno4 (MGP_PahariEiJ_G0014597) #34
Rat	MODERN SPECIES											Ces2c (ENSRNOG00000036571)	Ces2i (ENSRNOG00000012034)	RGD1563099 (ENSRNOG00000051496)	LOC102550729 (ENSRNOG00000066489)	LOC102550291 (ENSRNOG00000032668)	Grk5 (ENSRNOG00000011439) #21	Prdx3 (ENSRNOG00000010958) #22	Sfxn4 (ENSRNOG00000036572) #23	Dennd10 (ENSRNOG00000010230) #24	Eif3a (ENSRNOG00000010117) #25	Nanos1 (ENSRNOG00000025060)	AABR07007121.1 (ENSRNOG00000033843)	LOC100359574 (ENSRNOG00000025154)	Cacul1 (ENSRNOG00000009954) #26	Prlhr (ENSRNOG00000009922)	Fam204a (ENSRNOG00000009830) #27	Rab11fip2 (ENSRNOG00000009523) #28	Emx2 (ENSRNOG00000009482) #29	Pdzd8 (ENSRNOG00000009460) #30	Slc18a2 (ENSRNOG00000008890) #31	Kcnk18 (ENSRNOG00000032706) #32	Vax1 (ENSRNOG00000008824)
Upper Galilee mountains blind mole rat	MODERN SPECIES	556	Btbd16 (ENSNGAG00000019177)	ENSNGAG00000012564	Nsmce4a (ENSNGAG00000009717) #7	Ate1 (ENSNGAG00000011904) #9	Fgfr2 (ENSNGAG00000017837) #10	Wdr11 (ENSNGAG00000001781) #12	Plpp4 (ENSNGAG00000018055) #13	ENSNGAG00000022208 #14	ENSNGAG00000022868 #14	Mcmbp (ENSNGAG00000001050) #15	Inpp5f (ENSNGAG00000016489) #16	Bag3 (ENSNGAG00000018737) #18	Tial1 (ENSNGAG00000020427) #19	Rgs10 (ENSNGAG00000022036) #20	Grk5 (ENSNGAG00000022629) #21	Prdx3 (ENSNGAG00000006625) #22	Sfxn4 (ENSNGAG00000016136) #23	Dennd10 (ENSNGAG00000017203) #24	Eif3a (ENSNGAG00000019550) #25	Nanos1 (ENSNGAG00000023539)	Cacul1 (ENSNGAG00000023911) #26	Prlhr (ENSNGAG00000009274)	Fam204a (ENSNGAG00000001002) #27	Rab11fip2 (ENSNGAG00000008604) #28	Emx2 (ENSNGAG00000020570) #29	Pdzd8 (ENSNGAG00000021130) #30	Slc18a2 (ENSNGAG00000003157) #31	Kcnk18 (ENSNGAG00000005889) #32	Vax1 (ENSNGAG00000007068)	Shtn1 (ENSNGAG00000011332)	Eno4 (ENSNGAG00000018461) #34
Lesser Egyptian jerboa	MODERN SPECIES	70	Ate1 (ENSJJAG00000013127) #9	Fgfr2 (ENSJJAG00000012859) #10	Wdr11 (ENSJJAG00000014160) #12	Plpp4 (ENSJJAG00000022845) #13	ENSJJAG00000014744 #14	ENSJJAG00000021258 #14	Mcmbp (ENSJJAG00000022939) #15	Inpp5f (ENSJJAG00000020126) #16	ENSJJAG00000016414	ENSJJAG00000010122	Bag3 (ENSJJAG00000013499) #18	ENSJJAG00000005398 #19	ENSJJAG00000015632	Rgs10 (ENSJJAG00000010554) #20	Grk5 (ENSJJAG00000022251) #21	Prdx3 (ENSJJAG00000023489) #22	Sfxn4 (ENSJJAG00000009478) #23	Dennd10 (ENSJJAG00000006686) #24	Eif3a (ENSJJAG00000015031) #25	Cacul1 (ENSJJAG00000017702) #26	Prlhr (ENSJJAG00000010343)	Fam204a (ENSJJAG00000012691) #27	ENSJJAG00000009898	Rab11fip2 (ENSJJAG00000013758) #28	Emx2 (ENSJJAG00000016378) #29	Pdzd8 (ENSJJAG00000023211) #30	Slc18a2 (ENSJJAG00000023573) #31	Kcnk18 (ENSJJAG00000006813) #32	Vax1 (ENSJJAG00000020260)	Shtn1 (ENSJJAG00000020061)	Eno4 (ENSJJAG00000012645) #34
Kangaroo rat	MODERN SPECIES	377	Btbd16 (ENSDORG00000005110)	ENSDORG00000003881	Nsmce4a (ENSDORG00000003880) #7	Ate1 (ENSDORG00000011669) #9	Fgfr2 (ENSDORG00000005639) #10	Wdr11 (ENSDORG00000003077) #12	Plpp4 (ENSDORG00000002515) #13	ENSDORG00000008015 #14	ENSDORG00000027445 #14	Mcmbp (ENSDORG00000008011) #15	Inpp5f (ENSDORG00000003458) #16	Bag3 (ENSDORG00000011527) #18	Tial1 (ENSDORG00000010683) #19	Rgs10 (ENSDORG00000003521) #20	Grk5 (ENSDORG00000008496) #21	Prdx3 (ENSDORG00000004623) #22	Sfxn4 (ENSDORG00000004492) #23	Dennd10 (ENSDORG00000026703) #24	Eif3a (ENSDORG00000003481) #25	Nanos1 (ENSDORG00000029226)	Cacul1 (ENSDORG00000028189) #26	Prlhr (ENSDORG00000012693)	Fam204a (ENSDORG00000002074) #27	Rab11fip2 (ENSDORG00000010895) #28
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
Guinea pig	MODERN SPECIES	1	PLEKHA1 (ENSCPOG00000000631)	BTBD16 (ENSCPOG00000000630)	ENSCPOG00000000626	NSMCE4A (ENSCPOG00000000625) #7	ATE1 (ENSCPOG00000025966) #9	FGFR2 (ENSCPOG00000008833) #10	WDR11 (ENSCPOG00000014291) #12	PLPP4 (ENSCPOG00000012587) #13	SEC23IP (ENSCPOG00000004752) #14	MCMBP (ENSCPOG00000009028) #15	INPP5F (ENSCPOG00000009019) #16	BAG3 (ENSCPOG00000007549) #18	ENSCPOG00000006074	RGS10 (ENSCPOG00000004325) #20	GRK5 (ENSCPOG00000007453) #21	PRDX3 (ENSCPOG00000039588) #22	DENND10 (ENSCPOG00000015190) #24	EIF3A (ENSCPOG00000015188) #25	NANOS1 (ENSCPOG00000038609)	CACUL1 (ENSCPOG00000010902) #26	PRLHR (ENSCPOG00000007186)	FAM204A (ENSCPOG00000034589) #27	RAB11FIP2 (ENSCPOG00000000453) #28	EMX2 (ENSCPOG00000003299) #29	PDZD8 (ENSCPOG00000029989) #30	SLC18A2 (ENSCPOG00000003595) #31	KCNK18 (ENSCPOG00000003594) #32	VAX1 (ENSCPOG00000000542)	SHTN1 (ENSCPOG00000010984)	ENO4 (ENSCPOG00000010978) #34	HSPA12A (ENSCPOG00000003085) #33
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000168364	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
Long-tailed chinchilla	MODERN SPECIES	138																PRDX3 (ENSCLAG00000009194) #22	DENND10 (ENSCLAG00000009118) #24	EIF3A (ENSCLAG00000008246) #25	NANOS1 (ENSCLAG00000005574)	CACUL1 (ENSCLAG00000005363) #26	PRLHR (ENSCLAG00000017763)	FAM204A (ENSCLAG00000005139) #27	RAB11FIP2 (ENSCLAG00000005056) #28	EMX2 (ENSCLAG00000004915) #29	PDZD8 (ENSCLAG00000004722) #30	SLC18A2 (ENSCLAG00000004559) #31	ENSCLAG00000004441	VAX1 (ENSCLAG00000004384)	SHTN1 (ENSCLAG00000005361)	ENO4 (ENSCLAG00000005176) #34	HSPA12A (ENSCLAG00000004245) #33
Degu	DUPLICATION
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	51	WDR11 (ENSODEG00000017999) #12	ENSODEG00000017528	PLPP4 (ENSODEG00000017787) #13	ENSODEG00000017622	ENSODEG00000017620	ENSODEG00000020513	ENSODEG00000017568 #14	ENSODEG00000017627 #14	MCMBP (ENSODEG00000017666) #15	INPP5F (ENSODEG00000017771) #16	BAG3 (ENSODEG00000017665) #18	ENSODEG00000020474	TIAL1 (ENSODEG00000017741) #19	RGS10 (ENSODEG00000017673) #20	GRK5 (ENSODEG00000017760) #21	ENSODEG00000017739 #22	ENSODEG00000017551 #24	EIF3A (ENSODEG00000017775) #25	NANOS1 (ENSODEG00000017556)	CACUL1 (ENSODEG00000017578) #26	PRLHR (ENSODEG00000020548)	ENSODEG00000017661	ENSODEG00000018333	ENSODEG00000017684	ENSODEG00000017745 #27	RAB11FIP2 (ENSODEG00000017734) #28	EMX2 (ENSODEG00000017809) #29	PDZD8 (ENSODEG00000017906) #30	ENSODEG00000017723	ENSODEG00000017676	SLC18A2 (ENSODEG00000017927) #31
Degu	MODERN SPECIES	42	KATNIP (ENSODEG00000012822)	ENSODEG00000012637	IL21R (ENSODEG00000013082)	ENSODEG00000020080	ENSODEG00000013555	NSMCE1 (ENSODEG00000012706)	ENSODEG00000012500	ENSODEG00000013243	ENSODEG00000013618	ENSODEG00000013856	AQP8 (ENSODEG00000014253)	LCMT1 (ENSODEG00000014358)	ARHGAP17 (ENSODEG00000014875)	SLC5A11 (ENSODEG00000012731)	TNRC6A (ENSODEG00000012802)	ENSODEG00000013091 #22	RBBP6 (ENSODEG00000012319)	CACNG3 (ENSODEG00000012815)	ENSODEG00000012391	PRKCB (ENSODEG00000015099)	CHP2 (ENSODEG00000012692)	ERN2 (ENSODEG00000012257)	ENSODEG00000013110	DCTN5 (ENSODEG00000012350)	PALB2 (ENSODEG00000013941)	ENSODEG00000012090	ENSODEG00000012457	EARS2 (ENSODEG00000014346)	GGA2 (ENSODEG00000014446)	ENSODEG00000020247	COG7 (ENSODEG00000012315)
Degu	MODERN SPECIES	130	PRSS56 (ENSODEG00000007807)	CHRND (ENSODEG00000007466)	CHRNG (ENSODEG00000012691)	ENSODEG00000008170	EFHD1 (ENSODEG00000009395)	GIGYF2 (ENSODEG00000009987)	KCNJ13 (ENSODEG00000007933)	ENSODEG00000008808	SNORC (ENSODEG00000007643)	NGEF (ENSODEG00000008182)	ENSODEG00000008286	ENSODEG00000008563	ENSODEG00000019569	NEU2 (ENSODEG00000008947)	INPP5D (ENSODEG00000008216)	ENSODEG00000019603 #22	ATG16L1 (ENSODEG00000008154)	SAG (ENSODEG00000008121)	DGKD (ENSODEG00000008384)	ENSODEG00000019500	ENSODEG00000007995	ENSODEG00000008578	UGT1A6 (ENSODEG00000009095)	MROH2A (ENSODEG00000008630)	TRPM8 (ENSODEG00000012967)	SPP2 (ENSODEG00000008199)	ARL4C (ENSODEG00000019668)	SH3BP4 (ENSODEG00000008911)	AGAP1 (ENSODEG00000009204)	GBX2 (ENSODEG00000008224)	ASB18 (ENSODEG00000008270)
Degu	DUPLICATION
Degu	MODERN SPECIES	44	ENSODEG00000018335	ENSODEG00000018449	ENSODEG00000018350	ENSODEG00000018344	ENSODEG00000018387	FHOD3 (ENSODEG00000018487)	MOCOS (ENSODEG00000018329)	ELP2 (ENSODEG00000018360)	SLC39A6 (ENSODEG00000018391)	RPRD1A (ENSODEG00000018331)	ENSODEG00000018309	GALNT1 (ENSODEG00000018395)	ENSODEG00000020532	ENSODEG00000018436	ENSODEG00000018453	ENSODEG00000018420 #22	ENSODEG00000020539	ZNF24 (ENSODEG00000018328)	ENSODEG00000018345	ENSODEG00000018301	ZNF397 (ENSODEG00000018455)	MAPRE2 (ENSODEG00000018430)	DTNA (ENSODEG00000018476)	ENSODEG00000018326	NOL4 (ENSODEG00000018414)	ASXL3 (ENSODEG00000018431)	ENSODEG00000020529	KLHL14 (ENSODEG00000018307)	ENSODEG00000018292	GAREM1 (ENSODEG00000018355)	MEP1B (ENSODEG00000018454)
Degu	MODERN SPECIES	151	ZMAT3 (ENSODEG00000003313)	KCNMB2 (ENSODEG00000003349)	TBL1XR1 (ENSODEG00000003370)	ENSODEG00000003408	ENSODEG00000003420	SOX3 (ENSODEG00000003426)	ENSODEG00000003432	ENSODEG00000003458	ATP11C (ENSODEG00000003493)	MCF2 (ENSODEG00000003577)	F9 (ENSODEG00000003689)	FGF13 (ENSODEG00000003799)	ENSODEG00000003824	ENSODEG00000003847	ENSODEG00000003878	ENSODEG00000005517 #22	ENSODEG00000019174	ENSODEG00000019167	ENSODEG00000005534	ZIC3 (ENSODEG00000005556)	ENSODEG00000005580
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000044013	PLPP4 (ENSHGLG00000012927) #13	ENSHGLG00000045415	SEC23IP (ENSHGLG00000013752) #14	ENSHGLG00000011466 #15	INPP5F (ENSHGLG00000009930) #16	ENSHGLG00000042038	BAG3 (ENSHGLG00000013505) #18	ENSHGLG00000012192	TIAL1 (ENSHGLG00000013775) #19	ENSHGLG00000034213	RGS10 (ENSHGLG00000037265) #20	GRK5 (ENSHGLG00000050923) #21	ENSHGLG00000038210 #21	ENSHGLG00000011210	ENSHGLG00000009711 #22	DENND10 (ENSHGLG00000010220) #24	EIF3A (ENSHGLG00000013260) #25	NANOS1 (ENSHGLG00000045577)	ENSHGLG00000011185	CACUL1 (ENSHGLG00000009961) #26	PRLHR (ENSHGLG00000009873)	ENSHGLG00000040532	ENSHGLG00000047764 #27	RAB11FIP2 (ENSHGLG00000010515) #28	ENSHGLG00000021291	ENSHGLG00000037873	EMX2 (ENSHGLG00000012841) #29	PDZD8 (ENSHGLG00000012055) #30	SLC18A2 (ENSHGLG00000012362) #31	ENSHGLG00000045816
Naked mole-rat female	MODERN SPECIES	26	KCTD19 (ENSHGLG00000012309)	PLEKHG4 (ENSHGLG00000010252)	SLC9A5 (ENSHGLG00000012224)	FHOD1 (ENSHGLG00000012638)	TMEM208 (ENSHGLG00000015097)	ENSHGLG00000014519	ENSHGLG00000019291	ELMO3 (ENSHGLG00000014154)	E2F4 (ENSHGLG00000014276)	EXOC3L1 (ENSHGLG00000010315)	MATCAP1 (ENSHGLG00000011035)	ENSHGLG00000037771	HSF4 (ENSHGLG00000014438)	FBXL8 (ENSHGLG00000019079)	B3GNT9 (ENSHGLG00000035794)	ENSHGLG00000009942 #22	ENSHGLG00000016123	ENSHGLG00000046177	CBFB (ENSHGLG00000050469)	CES4A (ENSHGLG00000033432)	ENSHGLG00000012610	ENSHGLG00000016814	ENSHGLG00000042617	ENSHGLG00000042496	ENSHGLG00000014852	ENSHGLG00000014325	ENSHGLG00000018728	ENSHGLG00000038905	ENSHGLG00000011239	CDH13 (ENSHGLG00000016234)	HSBP1 (ENSHGLG00000044111)
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Marmotini	ANCESTRAL SPECIES	16	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
Marmotini_b	ANCESTRAL SPECIES	27	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00910000147822	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000161152	ENSGT00510000048167.a
Squirrel	MODERN SPECIES	86	BTBD16 (ENSSTOG00000015270)	ENSSTOG00000022252	NSMCE4A (ENSSTOG00000011112) #7	ATE1 (ENSSTOG00000027779) #9	FGFR2 (ENSSTOG00000003979) #10	WDR11 (ENSSTOG00000006935) #12	PLPP4 (ENSSTOG00000006962) #13	SEC23IP (ENSSTOG00000005178) #14	MCMBP (ENSSTOG00000005145) #15	INPP5F (ENSSTOG00000005115) #16	ENSSTOG00000032848	BAG3 (ENSSTOG00000023267) #18	TIAL1 (ENSSTOG00000025095) #19	RGS10 (ENSSTOG00000004925) #20	GRK5 (ENSSTOG00000002553) #21	PRDX3 (ENSSTOG00000002537) #22	SFXN4 (ENSSTOG00000032860) #23	DENND10 (ENSSTOG00000020685) #24	EIF3A (ENSSTOG00000002512) #25	CACUL1 (ENSSTOG00000007083) #26	PRLHR (ENSSTOG00000025720)	FAM204A (ENSSTOG00000028024) #27	RAB11FIP2 (ENSSTOG00000006253) #28	EMX2 (ENSSTOG00000012675) #29	PDZD8 (ENSSTOG00000022329) #30	SLC18A2 (ENSSTOG00000005607) #31	ENSSTOG00000005601	VAX1 (ENSSTOG00000023466)	SHTN1 (ENSSTOG00000019962)	ENO4 (ENSSTOG00000002618) #34	HSPA12A (ENSSTOG00000008905) #33
Arctic ground squirrel	MODERN SPECIES	28	TACC2 (ENSUPAG00010005112)	NSMCE4A (ENSUPAG00010006240) #7	ENSUPAG00010006255 #8	ATE1 (ENSUPAG00010006266) #9	FGFR2 (ENSUPAG00010006384) #10	WDR11 (ENSUPAG00010006463) #12	PLPP4 (ENSUPAG00010006532) #13	ENSUPAG00010006552	SEC23IP (ENSUPAG00010006554) #14	MCMBP (ENSUPAG00010006578) #15	INPP5F (ENSUPAG00010006608) #16	BAG3 (ENSUPAG00010006628) #18	TIAL1 (ENSUPAG00010006642) #19	RGS10 (ENSUPAG00010006669) #20	GRK5 (ENSUPAG00010006723) #21	PRDX3 (ENSUPAG00010006779) #22	SFXN4 (ENSUPAG00010006790) #23	ENSUPAG00010006798	ENSUPAG00010006801	EIF3A (ENSUPAG00010006808) #25	CACUL1 (ENSUPAG00010006883) #26	PRLHR (ENSUPAG00010006938)	FAM204A (ENSUPAG00010006940) #27	RAB11FIP2 (ENSUPAG00010006952) #28	ENSUPAG00010006967	EMX2 (ENSUPAG00010006971) #29	PDZD8 (ENSUPAG00010006974) #30	SLC18A2 (ENSUPAG00010006981) #31
Alpin marmot	MODERN SPECIES	53	ENSMMMG00000001271	NSMCE4A (ENSMMMG00000001206) #7	ATE1 (ENSMMMG00000001092) #9	FGFR2 (ENSMMMG00000000986) #10	WDR11 (ENSMMMG00000000912) #12	ENSMMMG00000000896	ENSMMMG00000000883	PLPP4 (ENSMMMG00000000832) #13	SEC23IP (ENSMMMG00000000778) #14	MCMBP (ENSMMMG00000000744) #15	INPP5F (ENSMMMG00000000681) #16	BAG3 (ENSMMMG00000000616) #18	TIAL1 (ENSMMMG00000000560) #19	RGS10 (ENSMMMG00000000551) #20	GRK5 (ENSMMMG00000000513) #21	PRDX3 (ENSMMMG00000000500) #22	SFXN4 (ENSMMMG00000000466) #23	DENND10 (ENSMMMG00000000410) #24	EIF3A (ENSMMMG00000000325) #25	CACUL1 (ENSMMMG00000000294) #26	PRLHR (ENSMMMG00000000282)	ENSMMMG00000000261 #27	RAB11FIP2 (ENSMMMG00000000233) #28	ENSMMMG00000000226	EMX2 (ENSMMMG00000000198) #29	ENSMMMG00000000188 #30	SLC18A2 (ENSMMMG00000000153) #31	ENSMMMG00000000118	SHTN1 (ENSMMMG00000000051)	ENO4 (ENSMMMG00000018717) #34	HSPA12A (ENSMMMG00000018698) #33
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005001901	ENSSVLG00005001936 #7	ENSSVLG00005001969 #8	ATE1 (ENSSVLG00005002012) #9	ENSSVLG00005002095	FGFR2 (ENSSVLG00005002254) #10	WDR11 (ENSSVLG00005002429) #12	PLPP4 (ENSSVLG00005002461) #13	SEC23IP (ENSSVLG00005002496) #14	MCMBP (ENSSVLG00005002533) #15	INPP5F (ENSSVLG00005002590) #16	BAG3 (ENSSVLG00005002726) #18	ENSSVLG00005002763 #19	RGS10 (ENSSVLG00005002843) #20	GRK5 (ENSSVLG00005002880) #21	PRDX3 (ENSSVLG00005002921) #22	SFXN4 (ENSSVLG00005002960) #23	DENND10 (ENSSVLG00005003022) #24	EIF3A (ENSSVLG00005003063) #25	NANOS1 (ENSSVLG00005003114)	CACUL1 (ENSSVLG00005003130) #26	PRLHR (ENSSVLG00005003161)	ENSSVLG00005003176 #27	ENSSVLG00005003202	RAB11FIP2 (ENSSVLG00005003229) #28	EMX2 (ENSSVLG00005003262) #29	PDZD8 (ENSSVLG00005003282) #30	SLC18A2 (ENSSVLG00005003306) #31	ENSSVLG00005003368 #32	ENSSVLG00005003385 #32	ENSSVLG00005003406 #32
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	9	ENSOCUG00000026111	NSMCE4A (ENSOCUG00000000820) #7	ATE1 (ENSOCUG00000003373) #9	FGFR2 (ENSOCUG00000007069) #10	ENSOCUG00000001764	WDR11 (ENSOCUG00000013912) #12	ENSOCUG00000017933 #13	SEC23IP (ENSOCUG00000003141) #14	MCMBP (ENSOCUG00000002235) #15	INPP5F (ENSOCUG00000002226) #16	BAG3 (ENSOCUG00000011696) #18	TIAL1 (ENSOCUG00000003783) #19	RGS10 (ENSOCUG00000014618) #20	ENSOCUG00000035399 #21	ENSOCUG00000036390 #21	ENSOCUG00000017334 #22	SFXN4 (ENSOCUG00000005006) #23	DENND10 (ENSOCUG00000005001) #24	EIF3A (ENSOCUG00000004996) #25	CACUL1 (ENSOCUG00000015521) #26	PRLHR (ENSOCUG00000008663)	ENSOCUG00000005150 #27	RAB11FIP2 (ENSOCUG00000009241) #28	EMX2 (ENSOCUG00000012088) #29	PDZD8 (ENSOCUG00000012085) #30	SLC18A2 (ENSOCUG00000012080) #31	KCNK18 (ENSOCUG00000015015) #32	VAX1 (ENSOCUG00000013528)	ENSOCUG00000022157	SHTN1 (ENSOCUG00000008906)	ENO4 (ENSOCUG00000008897) #34
Rabbit	MODERN SPECIES	10	LIMD2 (ENSOCUG00000004288)	MAP3K3 (ENSOCUG00000004277)	DCAF7 (ENSOCUG00000015874)	KCNH6 (ENSOCUG00000015857)	ENSOCUG00000034369	ACE (ENSOCUG00000001555)	CYB561 (ENSOCUG00000026470)	TANC2 (ENSOCUG00000001554)	MARCHF10 (ENSOCUG00000012601)	ENSOCUG00000017494	MRC2 (ENSOCUG00000031663)	TLK2 (ENSOCUG00000006074)	ENSOCUG00000011591	EFCAB3 (ENSOCUG00000001831)	ENSOCUG00000033945	ENSOCUG00000029284 #22	ENSOCUG00000013026	EFCAB13 (ENSOCUG00000038552)	ENSOCUG00000024256	ITGB3 (ENSOCUG00000005579)	ENSOCUG00000022076	MYL4 (ENSOCUG00000010829)	CDC27 (ENSOCUG00000010815)	KANSL1 (ENSOCUG00000011401)	MAPT (ENSOCUG00000011386)	SPPL2C (ENSOCUG00000028114)	CRHR1 (ENSOCUG00000025701)	ENSOCUG00000023198	NSF (ENSOCUG00000014783)	WNT3 (ENSOCUG00000014805)	WNT9B (ENSOCUG00000021211)
Pika	MODERN SPECIES	92															GRK5 (ENSOPRG00000004900) #21	PRDX3 (ENSOPRG00000004882) #22	ENSOPRG00000004850 #23	DENND10 (ENSOPRG00000004823) #24	EIF3A (ENSOPRG00000004752) #25
Atlantogenata	ANCESTRAL SPECIES	10															ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b #22
Armadillo	MODERN SPECIES	4401																ENSDNOG00000044485 #22	ENSDNOG00000044221	ENSDNOG00000039505	ENSDNOG00000043866	SPOCK3 (ENSDNOG00000002623)	TLL1 (ENSDNOG00000040283)	ENSDNOG00000048025	CPE (ENSDNOG00000009634)	MSMO1 (ENSDNOG00000009622)	KLHL2 (ENSDNOG00000009598)	TMEM192 (ENSDNOG00000038375)	ENSDNOG00000032640	ENSDNOG00000046782	ENSDNOG00000033261	ENSDNOG00000045737	ENSDNOG00000042283
Afrotheria	ANCESTRAL SPECIES	4															ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33	ENSGT00390000017460 #35
Afrotheria_a	ANCESTRAL SPECIES	4																ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00390000014431 #24	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34	ENSGT00940000154551 #33	ENSGT00390000017460 #35
Elephant	MODERN SPECIES	3																PRDX3 (ENSLAFG00000030975) #22	DENND10 (ENSLAFG00000012957) #24	EIF3A (ENSLAFG00000012948) #25	CACUL1 (ENSLAFG00000008702) #26	FAM204A (ENSLAFG00000016774) #27	RAB11FIP2 (ENSLAFG00000002770) #28	EMX2 (ENSLAFG00000016071) #29	PDZD8 (ENSLAFG00000009181) #30	SLC18A2 (ENSLAFG00000015794) #31	VAX1 (ENSLAFG00000018107)	SHTN1 (ENSLAFG00000012502)	ENO4 (ENSLAFG00000012497) #34	HSPA12A (ENSLAFG00000014420) #33	C10orf82 (ENSLAFG00000014418) #35	PNLIPRP2 (ENSLAFG00000014416) #36	PNLIP (ENSLAFG00000014403)
Hyrax	MODERN SPECIES	1605																PRDX3 (ENSPCAG00000010971) #22	ENSPCAG00000010865 #23	DENND10 (ENSPCAG00000010791) #24
Tenrec	MODERN SPECIES	1990															ENSETEG00000010932 #21	PRDX3 (ENSETEG00000010929) #22
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00940000165188	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000157351.j	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Opossum	DUPLICATION
Opossum	DUPLICATION
Opossum	MODERN SPECIES	2	ENSMODG00000023874	ENSMODG00000040944	ENSMODG00000040730	P2RX2 (ENSMODG00000015154)	POLE (ENSMODG00000015171)	PXMP2 (ENSMODG00000015176)	PGAM5 (ENSMODG00000015179)	ANKLE2 (ENSMODG00000015199)	ENSMODG00000048294	ENSMODG00000023870	ENSMODG00000023648	ENSMODG00000043816	ENSMODG00000046866	ENSMODG00000027552	ENSMODG00000049721	ENSMODG00000049288 #22	ENSMODG00000039078	ENSMODG00000023859	ENSMODG00000023861	ENSMODG00000043705 #22	ENSMODG00000037321	GOLGA3 (ENSMODG00000015263)	CHFR (ENSMODG00000015272)	FBRSL1 (ENSMODG00000015281)	GALNT9 (ENSMODG00000015333)	ENSMODG00000046361	NOC4L (ENSMODG00000015342)	DDX51 (ENSMODG00000015355)	ENSMODG00000047289	EP400 (ENSMODG00000015487)	PUS1 (ENSMODG00000015551)
Opossum	MODERN SPECIES	2	POLE (ENSMODG00000015171)	PXMP2 (ENSMODG00000015176)	PGAM5 (ENSMODG00000015179)	ANKLE2 (ENSMODG00000015199)	ENSMODG00000048294	ENSMODG00000023870	ENSMODG00000023648	ENSMODG00000043816	ENSMODG00000046866	ENSMODG00000027552	ENSMODG00000049721	ENSMODG00000049288 #22	ENSMODG00000039078	ENSMODG00000023859	ENSMODG00000023861	ENSMODG00000043705 #22	ENSMODG00000037321	GOLGA3 (ENSMODG00000015263)	CHFR (ENSMODG00000015272)	FBRSL1 (ENSMODG00000015281)	GALNT9 (ENSMODG00000015333)	ENSMODG00000046361	NOC4L (ENSMODG00000015342)	DDX51 (ENSMODG00000015355)	ENSMODG00000047289	EP400 (ENSMODG00000015487)	PUS1 (ENSMODG00000015551)	ULK1 (ENSMODG00000015566)	MMP17 (ENSMODG00000015576)	SFSWAP (ENSMODG00000015581)	ENSMODG00000039509
Opossum	MODERN SPECIES		ENSMODG00000008447	FGFR2 (ENSMODG00000008525) #10	WDR11 (ENSMODG00000008627) #12	ENSMODG00000039409	ENSMODG00000008634	PLPP4 (ENSMODG00000008644) #13	ENSMODG00000038446	SEC23IP (ENSMODG00000008685) #14	MCMBP (ENSMODG00000008714) #15	INPP5F (ENSMODG00000008751) #16	BAG3 (ENSMODG00000008764) #18	ENSMODG00000008865	RGS10 (ENSMODG00000047360) #20	ENSMODG00000024855	GRK5 (ENSMODG00000009266) #21	ENSMODG00000009286 #22	ENSMODG00000009292	EIF3A (ENSMODG00000009316) #25	NANOS1 (ENSMODG00000009319)	ENSMODG00000009342	CACUL1 (ENSMODG00000009365) #26	ENSMODG00000009370	ENSMODG00000009378 #27	RAB11FIP2 (ENSMODG00000009385) #28	EMX2 (ENSMODG00000009388) #29	PDZD8 (ENSMODG00000009394) #30	SLC18A2 (ENSMODG00000009424) #31	VAX1 (ENSMODG00000009428)	SHTN1 (ENSMODG00000009476)	ENSMODG00000009479	ENO4 (ENSMODG00000009486) #34
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000157351.j	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000157351.j	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00390000016534.B #8	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000157351.j	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204.e #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Common wonbat	MODERN SPECIES	581												TIAL1 (ENSVURG00010024923) #19	RGS10 (ENSVURG00010024927) #20	GRK5 (ENSVURG00010024930) #21	ENSVURG00010024931	PRDX3 (ENSVURG00010024932) #22	ENSVURG00010024935 #23	ENSVURG00010024938	EIF3A (ENSVURG00010024940) #25	NANOS1 (ENSVURG00010024946)	CACUL1 (ENSVURG00010024948) #26	ENSVURG00010024951	FAM204A (ENSVURG00010024953) #27	RAB11FIP2 (ENSVURG00010024955) #28	ENSVURG00010024958	ENSVURG00010024959	EMX2 (ENSVURG00010024960) #29	PDZD8 (ENSVURG00010024963) #30	SLC18A2 (ENSVURG00010024964) #31	VAX1 (ENSVURG00010024965)	SHTN1 (ENSVURG00010024967)
koala	MODERN SPECIES	30					FGFR2 (ENSPCIG00000004047) #10	WDR11 (ENSPCIG00000004026) #12	ENSPCIG00000019316	PLPP4 (ENSPCIG00000030825) #13	SEC23IP (ENSPCIG00000003012) #14	MCMBP (ENSPCIG00000003033) #15	INPP5F (ENSPCIG00000003062) #16	ENSPCIG00000003103 #18	TIAL1 (ENSPCIG00000003120) #19	RGS10 (ENSPCIG00000003153) #20	GRK5 (ENSPCIG00000003189) #21	PRDX3 (ENSPCIG00000028403) #22	ENSPCIG00000028409 #23	ENSPCIG00000035490	ENSPCIG00000028412	EIF3A (ENSPCIG00000028414) #25	ENSPCIG00000028425	CACUL1 (ENSPCIG00000028427) #26	ENSPCIG00000028430	FAM204A (ENSPCIG00000028435) #27	ENSPCIG00000019513	RAB11FIP2 (ENSPCIG00000036625) #28	EMX2 (ENSPCIG00000001396) #29	PDZD8 (ENSPCIG00000001428) #30	SLC18A2 (ENSPCIG00000001483) #31	ENSPCIG00000001543 #32	VAX1 (ENSPCIG00000034129)
Wallaby	MODERN SPECIES	7230																ENSMEUG00000007732 #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000009993	ENSSHAG00000012962 #7	ENSSHAG00000013127 #8	ATE1 (ENSSHAG00000028389) #9	FGFR2 (ENSSHAG00000006217) #10	WDR11 (ENSSHAG00000012828) #12	ENSSHAG00000013721	PLPP4 (ENSSHAG00000022918) #13	SEC23IP (ENSSHAG00000010548) #14	MCMBP (ENSSHAG00000010768) #15	INPP5F (ENSSHAG00000010978) #16	BAG3 (ENSSHAG00000012049) #18	TIAL1 (ENSSHAG00000012508) #19	RGS10 (ENSSHAG00000024740) #20	GRK5 (ENSSHAG00000013446) #21	PRDX3 (ENSSHAG00000014541) #22	ENSSHAG00000014575 #23	ENSSHAG00000014680	EIF3A (ENSSHAG00000001347) #25	NANOS1 (ENSSHAG00000029338)	CACUL1 (ENSSHAG00000007970) #26	ENSSHAG00000026913	ENSSHAG00000011601 #27	RAB11FIP2 (ENSSHAG00000013400) #28	EMX2 (ENSSHAG00000015725) #29	PDZD8 (ENSSHAG00000031609) #30	SLC18A2 (ENSSHAG00000016512) #31	ENSSHAG00000016715 #32	VAX1 (ENSSHAG00000022322)	ENSSHAG00000028544	SHTN1 (ENSSHAG00000017253)
Platypus	MODERN SPECIES	7	BUB3 (ENSOANG00000041516)	CPXM2 (ENSOANG00000038396)	ENSOANG00000030444	ENSOANG00000002087 #7	ATE1 (ENSOANG00000047065) #9	FGFR2 (ENSOANG00000029096) #10	WDR11 (ENSOANG00000002737) #12	PLPP4 (ENSOANG00000036798) #13	SEC23IP (ENSOANG00000001533) #14	MCMBP (ENSOANG00000001532) #15	INPP5F (ENSOANG00000001530) #16	BAG3 (ENSOANG00000009317) #18	ENSOANG00000050160	RGS10 (ENSOANG00000012170) #20	GRK5 (ENSOANG00000004388) #21	PRDX3 (ENSOANG00000002979) #22	ENSOANG00000009547 #23	ENSOANG00000009548	EIF3A (ENSOANG00000007359) #25	CACUL1 (ENSOANG00000007361) #26	ENSOANG00000020103 #27	RAB11FIP2 (ENSOANG00000007362) #28	EMX2 (ENSOANG00000048943) #29	PDZD8 (ENSOANG00000014131) #30	SLC18A2 (ENSOANG00000014132) #31	ENSOANG00000050724	VAX1 (ENSOANG00000037648)	SHTN1 (ENSOANG00000014133)	ENSOANG00000014134 #34	HSPA12A (ENSOANG00000014135) #33	ENSOANG00000014137 #35
Sauria	ANCESTRAL SPECIES	8	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Archosauria	ANCESTRAL SPECIES	7	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Aves	ANCESTRAL SPECIES	6	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Neognathae	ANCESTRAL SPECIES	7	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Anatidae	ANCESTRAL SPECIES	4	ENSGT00940000155157	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000165789	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Pink-footed goose	MODERN SPECIES	11	PLEKHA1 (ENSABRG00000000331)	TACC2 (ENSABRG00000000398)	NSMCE4A (ENSABRG00000000562) #7	ATE1 (ENSABRG00000000573) #9	FGFR2 (ENSABRG00000000608) #10	ENSABRG00000000638	WDR11 (ENSABRG00000000644) #12	PLPP4 (ENSABRG00000000668) #13	SEC23IP (ENSABRG00000000804) #14	MCMBP (ENSABRG00000000877) #15	INPP5F (ENSABRG00000000924) #16	BAG3 (ENSABRG00000000967) #18	TIAL1 (ENSABRG00000000984) #19	RGS10 (ENSABRG00000001042) #20	GRK5 (ENSABRG00000001057) #21	PRDX3 (ENSABRG00000001149) #22	SFXN4 (ENSABRG00000001170) #23	ENSABRG00000001251	EIF3A (ENSABRG00000001287) #25	NANOS1 (ENSABRG00000001345)	CACUL1 (ENSABRG00000001401) #26	ENSABRG00000001426	FAM204A (ENSABRG00000001447) #27	RAB11FIP2 (ENSABRG00000001462) #28	EMX2 (ENSABRG00000001504) #29	PDZD8 (ENSABRG00000001523) #30	SLC18A2 (ENSABRG00000001541) #31	ENSABRG00000001573	VAX1 (ENSABRG00000001585)	SHTN1 (ENSABRG00000001621)	ENO4 (ENSABRG00000001670) #34
Duck	MODERN SPECIES	24	ATE1 (ENSAPLG00000012854) #9	FGFR2 (ENSAPLG00000011952) #10	WDR11 (ENSAPLG00000011124) #12	PLPP4 (ENSAPLG00000011003) #13	ENSAPLG00000018439 #14	ENSAPLG00000025076 #14	MCMBP (ENSAPLG00000009939) #15	ENSAPLG00000028455	ENSAPLG00000021679 #16	ENSAPLG00000021626 #16	ENSAPLG00000029441 #18	TIAL1 (ENSAPLG00000009088) #19	RGS10 (ENSAPLG00000009045) #20	ENSAPLG00000031123 ##21	ENSAPLG00000007885 ##21	PRDX3 (ENSAPLG00000021984) #22	SFXN4 (ENSAPLG00000007674) #23	ENSAPLG00000007524	EIF3A (ENSAPLG00000006637) #25	NANOS1 (ENSAPLG00000021595)	CACUL1 (ENSAPLG00000006462) #26	ENSAPLG00000001060	FAM204A (ENSAPLG00000006401) #27	RAB11FIP2 (ENSAPLG00000006278) #28	EMX2 (ENSAPLG00000024273) #29	PDZD8 (ENSAPLG00000022941) #30	SLC18A2 (ENSAPLG00000010707) #31	ENSAPLG00000010704	VAX1 (ENSAPLG00000010700)	SHTN1 (ENSAPLG00000010399)	ENO4 (ENSAPLG00000010075) #34
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00940000156955	ENSGT00940000155157	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Japanese quail	MODERN SPECIES	24	HTRA1 (ENSCJPG00005020160)	PLEKHA1 (ENSCJPG00005020159)	TACC2 (ENSCJPG00005020158)	NSMCE4A (ENSCJPG00005020157) #7	ATE1 (ENSCJPG00005020156) #9	FGFR2 (ENSCJPG00005020154) #10	WDR11 (ENSCJPG00005020153) #12	PLPP4 (ENSCJPG00005020152) #13	SEC23IP (ENSCJPG00005020147) #14	MCMBP (ENSCJPG00005020146) #15	INPP5F (ENSCJPG00005020145) #16	BAG3 (ENSCJPG00005020144) #18	ENSCJPG00005020143	RGS10 (ENSCJPG00005020142) #20	GRK5 (ENSCJPG00005020139) #21	PRDX3 (ENSCJPG00005020137) #22	SFXN4 (ENSCJPG00005020136) #23	ENSCJPG00005020135	EIF3A (ENSCJPG00005020132) #25	NANOS1 (ENSCJPG00005020131)	CACUL1 (ENSCJPG00005020128) #26	ENSCJPG00005020127	FAM204A (ENSCJPG00005020126) #27	RAB11FIP2 (ENSCJPG00005020123) #28	ENSCJPG00005020122	EMX2 (ENSCJPG00005020121) #29	PDZD8 (ENSCJPG00005020120) #30	SLC18A2 (ENSCJPG00005020119) #31	KCNK18 (ENSCJPG00005020118) #32	VAX1 (ENSCJPG00005020117)	SHTN1 (ENSCJPG00005020115)
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00940000156955	ENSGT00940000155157	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Chicken	MODERN SPECIES	35	HTRA1 (ENSGALG00010001705)	PLEKHA1 (ENSGALG00010001702)	TACC2 (ENSGALG00010001465)	NSMCE4A (ENSGALG00010001432) #7	ATE1 (ENSGALG00010001426) #9	FGFR2 (ENSGALG00010001411) #10	WDR11 (ENSGALG00010001398) #12	PLPP4 (ENSGALG00010001287) #13	SEC23IP (ENSGALG00010002396) #14	MCMBP (ENSGALG00010002387) #15	INPP5F (ENSGALG00010002383) #16	BAG3 (ENSGALG00010002371) #18	TIAL1 (ENSGALG00010002361)	RGS10 (ENSGALG00010002277) #20	GRK5 (ENSGALG00010002251) #21	PRDX3 (ENSGALG00010002225) #22	SFXN4 (ENSGALG00010002202) #23	FAM45A (ENSGALG00010002196)	EIF3A (ENSGALG00010002150) #25	NANOS1 (ENSGALG00010002766)	CACUL1 (ENSGALG00010002146) #26	PRLHR (ENSGALG00010002056)	FAM204A (ENSGALG00010001972) #27	RAB11FIP2 (ENSGALG00010001958) #28	EMX2 (ENSGALG00010001948) #29	PDZD8 (ENSGALG00010022280) #30	SLC18A2 (ENSGALG00010022271) #31	KCNK18 (ENSGALG00010022257) #32	VAX1 (ENSGALG00010017907)	SHTN1 (ENSGALG00010022820)	ENO4 (ENSGALG00010022787) #34
Turkey	MODERN SPECIES	28	ENSMGAG00000019998	JAKMIP3 (ENSMGAG00000011861)	ENSMGAG00000011869	ENSMGAG00000011859	ENSMGAG00000011899	ENSMGAG00000015341	ENSMGAG00000011907	ENSMGAG00000011912	ENSMGAG00000011914	ENSMGAG00000011290 #27	ENSMGAG00000015338	ENSMGAG00000011298 #26	ENSMGAG00000011305 #25	ENSMGAG00000011328 #23	ENSMGAG00000011324	ENSMGAG00000011337 #22	ENSMGAG00000011341 ##21	ENSMGAG00000011359 #20	ENSMGAG00000017692 ##21	ENSMGAG00000011368	BAG3 (ENSMGAG00000011390) #18	ENSMGAG00000011398 #15	ENSMGAG00000017041 #16	SEC23IP (ENSMGAG00000011411) #14	ENSMGAG00000011434 #13	ENSMGAG00000018783 #12	ENSMGAG00000022256 #12	ENSMGAG00000011456 #10	ENSMGAG00000011508	ENSMGAG00000011490 #9	ENSMGAG00000011516
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00940000155157	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000166380	ENSGT00940000161152	ENSGT00510000048167.a
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00940000155157	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000166380	ENSGT00940000161152	ENSGT00510000048167.a
Great tit	MODERN SPECIES	26	HTRA1 (ENSPMJG00000005725)	PLEKHA1 (ENSPMJG00000005718)	TACC2 (ENSPMJG00000005700)	NSMCE4A (ENSPMJG00000005697) #7	ATE1 (ENSPMJG00000005695) #9	FGFR2 (ENSPMJG00000005686) #10	WDR11 (ENSPMJG00000005652) #12	PLPP4 (ENSPMJG00000005646) #13	SEC23IP (ENSPMJG00000005643) #14	MCMBP (ENSPMJG00000005642) #15	INPP5F (ENSPMJG00000005637) #16	BAG3 (ENSPMJG00000005635) #18	ENSPMJG00000005634	RGS10 (ENSPMJG00000005630) #20	GRK5 (ENSPMJG00000005626) #21	PRDX3 (ENSPMJG00000005590) #22	SFXN4 (ENSPMJG00000005585) #23	ENSPMJG00000005582	EIF3A (ENSPMJG00000005575) #25	NANOS1 (ENSPMJG00000005572)	CACUL1 (ENSPMJG00000005563) #26	ENSPMJG00000005551	FAM204A (ENSPMJG00000005546) #27	RAB11FIP2 (ENSPMJG00000005542) #28	EMX2 (ENSPMJG00000005539) #29	PDZD8 (ENSPMJG00000005535) #30	SLC18A2 (ENSPMJG00000005533) #31	ENSPMJG00000005530	VAX1 (ENSPMJG00000005525)	SHTN1 (ENSPMJG00000005521)	ENO4 (ENSPMJG00000005517) #34
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000155157	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000166380	ENSGT00940000161152	ENSGT00510000048167.a
Flycatcher	MODERN SPECIES	25	TACC2 (ENSFALG00000002148)	NSMCE4A (ENSFALG00000002150) #7	ATE1 (ENSFALG00000002151) #9	FGFR2 (ENSFALG00000002152) #10	WDR11 (ENSFALG00000002154) #12	ENSFALG00000024601	PLPP4 (ENSFALG00000026547) #13	SEC23IP (ENSFALG00000002159) #14	MCMBP (ENSFALG00000002162) #15	INPP5F (ENSFALG00000002164) #16	ENSFALG00000024667	BAG3 (ENSFALG00000002165) #18	ENSFALG00000002173	RGS10 (ENSFALG00000002181) #20	GRK5 (ENSFALG00000002184) #21	PRDX3 (ENSFALG00000024188) #22	ENSFALG00000002189 #23	DENND10 (ENSFALG00000002191) #24	EIF3A (ENSFALG00000002192) #25	NANOS1 (ENSFALG00000002196)	CACUL1 (ENSFALG00000024371) #26	ENSFALG00000015039	FAM204A (ENSFALG00000002199) #27	ENSFALG00000024615	RAB11FIP2 (ENSFALG00000002200) #28	EMX2 (ENSFALG00000024314) #29	ENSFALG00000023408	PDZD8 (ENSFALG00000002202) #30	SLC18A2 (ENSFALG00000002203) #31	ENSFALG00000002204	VAX1 (ENSFALG00000026819)
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00940000155157	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000166380	ENSGT00940000161152	ENSGT00510000048167.a
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00940000155157	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000165789	ENSGT00940000166380	ENSGT00940000161152	ENSGT00510000048167.a
Common canary	MODERN SPECIES	7	PLEKHA1 (ENSSCAG00000013721)	TACC2 (ENSSCAG00000013757)	NSMCE4A (ENSSCAG00000013790) #7	ATE1 (ENSSCAG00000013795) #9	FGFR2 (ENSSCAG00000013802) #10	ENSSCAG00000013814	WDR11 (ENSSCAG00000013823) #12	PLPP4 (ENSSCAG00000013843) #13	SEC23IP (ENSSCAG00000013890) #14	MCMBP (ENSSCAG00000014009) #15	INPP5F (ENSSCAG00000014059) #16	BAG3 (ENSSCAG00000014200) #18	TIAL1 (ENSSCAG00000014203) #19	RGS10 (ENSSCAG00000014206) #20	GRK5 (ENSSCAG00000014217) #21	PRDX3 (ENSSCAG00000014236) #22	SFXN4 (ENSSCAG00000014243) #23	ENSSCAG00000014253	EIF3A (ENSSCAG00000014260) #25	NANOS1 (ENSSCAG00000014280)	CACUL1 (ENSSCAG00000014288) #26	ENSSCAG00000014301	FAM204A (ENSSCAG00000014304) #27	RAB11FIP2 (ENSSCAG00000014312) #28	EMX2 (ENSSCAG00000014317) #29	PDZD8 (ENSSCAG00000014321) #30	SLC18A2 (ENSSCAG00000014325) #31	ENSSCAG00000014332	SHTN1 (ENSSCAG00000014384)	ENO4 (ENSSCAG00000014501) #34	HSPA12A (ENSSCAG00000014511) #33
Medium ground finch	MODERN SPECIES	154							WDR11 (ENSGFOG00000011749) #12	PLPP4 (ENSGFOG00000011826) #13	SEC23IP (ENSGFOG00000011864) #14	MCMBP (ENSGFOG00000012006) #15	INPP5F (ENSGFOG00000012033) #16	BAG3 (ENSGFOG00000012229) #18	ENSGFOG00000012234	RGS10 (ENSGFOG00000012239) #20	GRK5 (ENSGFOG00000012252) #21	PRDX3 (ENSGFOG00000012269) #22	SFXN4 (ENSGFOG00000012273) #23	DENND10 (ENSGFOG00000012278) #24	EIF3A (ENSGFOG00000012296) #25	CACUL1 (ENSGFOG00000012331) #26	ENSGFOG00000012334	FAM204A (ENSGFOG00000012337) #27	RAB11FIP2 (ENSGFOG00000012341) #28	EMX2 (ENSGFOG00000012344) #29	PDZD8 (ENSGFOG00000012352) #30	ENSGFOG00000012365 #31
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000155157	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000166380	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Kakapo	MODERN SPECIES	22	PLEKHA1 (ENSSHBG00005004075)	TACC2 (ENSSHBG00005003706)	NSMCE4A (ENSSHBG00005003627) #7	ATE1 (ENSSHBG00005003603) #9	FGFR2 (ENSSHBG00005003568) #10	WDR11 (ENSSHBG00005003553) #12	PLPP4 (ENSSHBG00005003537) #13	SEC23IP (ENSSHBG00005003520) #14	MCMBP (ENSSHBG00005003485) #15	INPP5F (ENSSHBG00005003229) #16	BAG3 (ENSSHBG00005003039) #18	ENSSHBG00005003028	ENSSHBG00005003012	RGS10 (ENSSHBG00005002990) #20	GRK5 (ENSSHBG00005002953) #21	PRDX3 (ENSSHBG00005002865) #22	SFXN4 (ENSSHBG00005002846) #23	ENSSHBG00005002832	EIF3A (ENSSHBG00005002799) #25	NANOS1 (ENSSHBG00005002776)	CACUL1 (ENSSHBG00005002756) #26	ENSSHBG00005002745	FAM204A (ENSSHBG00005002729) #27	RAB11FIP2 (ENSSHBG00005002712) #28	EMX2 (ENSSHBG00005002702) #29	PDZD8 (ENSSHBG00005000838) #30	SLC18A2 (ENSSHBG00005000837) #31	ENSSHBG00005000836	VAX1 (ENSSHBG00005000835)	SHTN1 (ENSSHBG00005000834)	ENO4 (ENSSHBG00005000833) #34
Golden eagle	MODERN SPECIES	2	ENSACCG00020006849	PLEKHA1 (ENSACCG00020006872)	ENSACCG00020006968	NSMCE4A (ENSACCG00020007065) #7	ATE1 (ENSACCG00020007114) #9	FGFR2 (ENSACCG00020007148) #10	WDR11 (ENSACCG00020007177) #12	PLPP4 (ENSACCG00020007199) #13	SEC23IP (ENSACCG00020007215) #14	MCMBP (ENSACCG00020007244) #15	INPP5F (ENSACCG00020007437) #16	BAG3 (ENSACCG00020007545) #18	TIAL1 (ENSACCG00020007557) #19	RGS10 (ENSACCG00020007575) #20	GRK5 (ENSACCG00020007658) #21	PRDX3 (ENSACCG00020007769) #22	SFXN4 (ENSACCG00020007778) #23	ENSACCG00020007799	EIF3A (ENSACCG00020007813) #25	NANOS1 (ENSACCG00020007832)	CACUL1 (ENSACCG00020007856) #26	ENSACCG00020007882	FAM204A (ENSACCG00020007890) #27	RAB11FIP2 (ENSACCG00020007904) #28	EMX2 (ENSACCG00020007914) #29	PDZD8 (ENSACCG00020007923) #30	SLC18A2 (ENSACCG00020007935) #31	ENSACCG00020007947	VAX1 (ENSACCG00020007958)	SHTN1 (ENSACCG00020007966)	ENO4 (ENSACCG00020007991) #34
African ostrich	MODERN SPECIES	393										SEC23IP (ENSSCUG00000003377) #14	MCMBP (ENSSCUG00000003379) #15	INPP5F (ENSSCUG00000003381) #16	BAG3 (ENSSCUG00000003384) #18	ENSSCUG00000003392	RGS10 (ENSSCUG00000003399) #20	PRDX3 (ENSSCUG00000003427) #22	ENSSCUG00000003430 #23	DENND10 (ENSSCUG00000003434) #24	ENSSCUG00000003436	EIF3A (ENSSCUG00000003454) #25	CACUL1 (ENSSCUG00000003490) #26	ENSSCUG00000003496	FAM204A (ENSSCUG00000003500) #27	RAB11FIP2 (ENSSCUG00000003504) #28	EMX2 (ENSSCUG00000003507) #29	PDZD8 (ENSSCUG00000003511) #30	SLC18A2 (ENSSCUG00000005382) #31	ENSSCUG00000005383	SHTN1 (ENSSCUG00000005385)	ENO4 (ENSSCUG00000005387) #34	HSPA12A (ENSSCUG00000005401) #33
Australian saltwater crocodile	MODERN SPECIES	68	ENSCPRG00005010107	TACC2 (ENSCPRG00005010117)	NSMCE4A (ENSCPRG00005010129) #7	ATE1 (ENSCPRG00005010141) #9	FGFR2 (ENSCPRG00005010191) #10	WDR11 (ENSCPRG00005010238) #12	PLPP4 (ENSCPRG00005010400) #13	ENSCPRG00005010403	SEC23IP (ENSCPRG00005010423) #14	MCMBP (ENSCPRG00005010437) #15	INPP5F (ENSCPRG00005010451) #16	BAG3 (ENSCPRG00005010481) #18	TIAL1 (ENSCPRG00005010488) #19	ENSCPRG00005010516	GRK5 (ENSCPRG00005010553) #21	PRDX3 (ENSCPRG00005010560) #22	ENSCPRG00005010572	EIF3A (ENSCPRG00005010591) #25	NANOS1 (ENSCPRG00005010610)	CACUL1 (ENSCPRG00005010620) #26	PRLHR (ENSCPRG00005010634)	ENSCPRG00005010636	FAM204A (ENSCPRG00005010653) #27	RAB11FIP2 (ENSCPRG00005010665) #28	ENSCPRG00005010671	PDZD8 (ENSCPRG00005010673) #30	SLC18A2 (ENSCPRG00005010681) #31	ENSCPRG00005010684	SHTN1 (ENSCPRG00005010686)	ENO4 (ENSCPRG00005010695) #34	HSPA12A (ENSCPRG00005010703) #33
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Chinese turtle	MODERN SPECIES	154	PLEKHA1 (ENSPSIG00000010906)	TACC2 (ENSPSIG00000010319)	NSMCE4A (ENSPSIG00000010064) #7	ATE1 (ENSPSIG00000009429) #9	FGFR2 (ENSPSIG00000007758) #10	WDR11 (ENSPSIG00000007623) #12	PLPP4 (ENSPSIG00000007283) #13	ENSPSIG00000000417	MCMBP (ENSPSIG00000006179) #15	INPP5F (ENSPSIG00000016807) #16	SEC23IP (ENSPSIG00000016139) #14	BAG3 (ENSPSIG00000015275) #18	ENSPSIG00000013690	ENSPSIG00000013652	GRK5 (ENSPSIG00000008000) #21	PRDX3 (ENSPSIG00000007308) #22	SFXN4 (ENSPSIG00000006657) #23	DENND10 (ENSPSIG00000006426) #24	ENSPSIG00000000412	EIF3A (ENSPSIG00000006102) #25	ENSPSIG00000000407	CACUL1 (ENSPSIG00000017349) #26	PRLHR (ENSPSIG00000017264)	ENSPSIG00000000403	FAM204A (ENSPSIG00000016004) #27	RAB11FIP2 (ENSPSIG00000015960) #28	EMX2 (ENSPSIG00000015205) #29	ENSPSIG00000000395	PDZD8 (ENSPSIG00000015048) #30	SLC18A2 (ENSPSIG00000014423) #31	ENSPSIG00000014326
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.g #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.a.a ##21	ENSGT00940000160702.a.b ##21	ENSGT00940000153430.a.b.g #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a	ENSGT00950000182805.a.b #34
Goode s thornscrub tortoise	MODERN SPECIES	21	NSMCE4A (ENSGEVG00005020083) #7	ATE1 (ENSGEVG00005020042) #9	ENSGEVG00005020017 #10	ENSGEVG00005020010 #10	ENSGEVG00005019994	WDR11 (ENSGEVG00005019974) #12	PLPP4 (ENSGEVG00005019965) #13	SEC23IP (ENSGEVG00005019936) #14	MCMBP (ENSGEVG00005019925) #15	INPP5F (ENSGEVG00005019898) #16	BAG3 (ENSGEVG00005019883) #18	TIAL1 (ENSGEVG00005019870) #19	RGS10 (ENSGEVG00005019839) #20	ENSGEVG00005019838 ##21	ENSGEVG00005019814 ##21	PRDX3 (ENSGEVG00005019794) #22	SFXN4 (ENSGEVG00005019784) #23	ENSGEVG00005019776	EIF3A (ENSGEVG00005019761) #25	NANOS1 (ENSGEVG00005019751)	CACUL1 (ENSGEVG00005019742) #26	ENSGEVG00005019732	FAM204A (ENSGEVG00005019728) #27	RAB11FIP2 (ENSGEVG00005019720) #28	EMX2 (ENSGEVG00005019717) #29	PDZD8 (ENSGEVG00005019710) #30	SLC18A2 (ENSGEVG00005019697) #31	ENSGEVG00005019691	VAX1 (ENSGEVG00005019680)	SHTN1 (ENSGEVG00005019656)	ENO4 (ENSGEVG00005019604) #34
Abingdon island giant tortoise	MODERN SPECIES	754															GRK5 (ENSCABG00000009676) ##21	ENSCABG00000009682 #22	SFXN4 (ENSCABG00000009684) #23	ENSCABG00000009686	EIF3A (ENSCABG00000009703) #25	NANOS1 (ENSCABG00000009711)	ENSCABG00000009713	CACUL1 (ENSCABG00000009715) #26	ENSCABG00000009716	FAM204A (ENSCABG00000009718) #27	ENSCABG00000009720	RAB11FIP2 (ENSCABG00000009721) #28	EMX2 (ENSCABG00000009722) #29	PDZD8 (ENSCABG00000009724) #30	SLC18A2 (ENSCABG00000009726) #31	KCNK18 (ENSCABG00000009763) #32	VAX1 (ENSCABG00000009765)
Emydidae	ANCESTRAL SPECIES	6	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b.g #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000161152	ENSGT00510000048167.a
Three-toed box turtle	MODERN SPECIES	39	BTBD16 (ENSTMTG00000019086)	ENSTMTG00000019055	NSMCE4A (ENSTMTG00000019033) #7	ATE1 (ENSTMTG00000018984) #9	FGFR2 (ENSTMTG00000018950) #10	WDR11 (ENSTMTG00000018901) #12	PLPP4 (ENSTMTG00000018885) #13	SEC23IP (ENSTMTG00000018842) #14	MCMBP (ENSTMTG00000018812) #15	INPP5F (ENSTMTG00000018304) #16	ENSTMTG00000018261 #18	ENSTMTG00000018249 #18	TIAL1 (ENSTMTG00000018217) #19	RGS10 (ENSTMTG00000018181) #20	GRK5 (ENSTMTG00000017948) ##21	PRDX3 (ENSTMTG00000017906) #22	SFXN4 (ENSTMTG00000017883) #23	ENSTMTG00000017839	EIF3A (ENSTMTG00000017793) #25	NANOS1 (ENSTMTG00000017785)	CACUL1 (ENSTMTG00000017777) #26	PRLHR (ENSTMTG00000017752)	ENSTMTG00000017739	FAM204A (ENSTMTG00000017723) #27	RAB11FIP2 (ENSTMTG00000017710) #28	EMX2 (ENSTMTG00000017701) #29	PDZD8 (ENSTMTG00000017682) #30	SLC18A2 (ENSTMTG00000017630) #31	ENSTMTG00000017617	VAX1 (ENSTMTG00000017611)	SHTN1 (ENSTMTG00000017571)
painted turtle	MODERN SPECIES	15	HMX3 (ENSCPBG00000028093)	ACADSB (ENSCPBG00000028097)	IKZF5 (ENSCPBG00000028099)	ENSCPBG00000000116	C10orf88 (ENSCPBG00000000128)	ENSCPBG00000000152	ENSCPBG00000000160	ENSCPBG00000000175	ENSCPBG00000000282	HTRA1 (ENSCPBG00000000966)	PLEKHA1 (ENSCPBG00000001016)	BAG3 (ENSCPBG00000001092) #18	TIAL1 (ENSCPBG00000001103) #19	RGS10 (ENSCPBG00000001134) #20	GRK5 (ENSCPBG00000001153) #21	PRDX3 (ENSCPBG00000001195) #22	SFXN4 (ENSCPBG00000001202) #23	ENSCPBG00000001216	EIF3A (ENSCPBG00000001266) #25	NANOS1 (ENSCPBG00000002172)	CACUL1 (ENSCPBG00000002191) #26	PRLHR (ENSCPBG00000002209)	ENSCPBG00000002224	ENSCPBG00000002230 #27	RAB11FIP2 (ENSCPBG00000002254) #28	EMX2 (ENSCPBG00000002268) #29	PDZD8 (ENSCPBG00000002285) #30	SLC18A2 (ENSCPBG00000002329) #31	KCNK18 (ENSCPBG00000002360) #32	VAX1 (ENSCPBG00000002374)	SHTN1 (ENSCPBG00000002394)
Testudinoidea	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.h #22
Testudinidae	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b.h #22
Abingdon island giant tortoise	MODERN SPECIES	2265																ENSCABG00000013129 #22
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00960000190376	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000166380	ENSGT00940000161152
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000166380	ENSGT00940000161152
Laterata	ANCESTRAL SPECIES		ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00700000104522 #32	ENSGT00940000165789	ENSGT00940000161152
Common wall lizard	MODERN SPECIES	13	BTBD16 (ENSPMRG00000006301)	TACC2 (ENSPMRG00000006314)	ENSPMRG00000006364 #7	ATE1 (ENSPMRG00000006382) #9	FGFR2 (ENSPMRG00000006399) #10	WDR11 (ENSPMRG00000006420) #12	PLPP4 (ENSPMRG00000006469) #13	ENSPMRG00000006493	SEC23IP (ENSPMRG00000006499) #14	MCMBP (ENSPMRG00000006513) #15	INPP5F (ENSPMRG00000006527) #16	BAG3 (ENSPMRG00000006537) #18	ENSPMRG00000006541	RGS10 (ENSPMRG00000006569) #20	GRK5 (ENSPMRG00000006579) #21	PRDX3 (ENSPMRG00000006596) #22	ENSPMRG00000006605	EIF3A (ENSPMRG00000006618) #25	NANOS1 (ENSPMRG00000006637)	CACUL1 (ENSPMRG00000006643) #26	ENSPMRG00000006651	ENSPMRG00000006656	ENSPMRG00000006657	ENSPMRG00000006659	FAM204A (ENSPMRG00000006664) #27	RAB11FIP2 (ENSPMRG00000006683) #28	EMX2 (ENSPMRG00000006691) #29	PDZD8 (ENSPMRG00000006695) #30	SLC18A2 (ENSPMRG00000006698) #31	KCNK18 (ENSPMRG00000006704) #32	ENSPMRG00000006710
Argentine black and white tegu	MODERN SPECIES	65	PLEKHA1 (ENSSMRG00000005536)	BTBD16 (ENSSMRG00000005515)	TACC2 (ENSSMRG00000005489)	ENSSMRG00000005469	ATE1 (ENSSMRG00000005447) #9	FGFR2 (ENSSMRG00000005415) #10	WDR11 (ENSSMRG00000005374) #12	PLPP4 (ENSSMRG00000005367) #13	SEC23IP (ENSSMRG00000005344) #14	MCMBP (ENSSMRG00000004639) #15	INPP5F (ENSSMRG00000004622) #16	BAG3 (ENSSMRG00000004620) #18	TIAL1 (ENSSMRG00000004608) #19	ENSSMRG00000004590	GRK5 (ENSSMRG00000004549) #21	PRDX3 (ENSSMRG00000004533) #22	SFXN4 (ENSSMRG00000004528) #23	ENSSMRG00000004522	EIF3A (ENSSMRG00000003451) #25	NANOS1 (ENSSMRG00000003441)	CACUL1 (ENSSMRG00000003422) #26	PRLHR (ENSSMRG00000003404)	ENSSMRG00000003401	FAM204A (ENSSMRG00000003386) #27	ENSSMRG00000003380	RAB11FIP2 (ENSSMRG00000003366) #28	EMX2 (ENSSMRG00000003348) #29	PDZD8 (ENSSMRG00000003328) #30	SLC18A2 (ENSSMRG00000003317) #31	ENSSMRG00000003305	VAX1 (ENSSMRG00000003281)
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000160482 #19	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000166380	ENSGT00940000161152	ENSGT00510000048167.a
Elapidae	ANCESTRAL SPECIES	4	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000166380	ENSGT00940000161152	ENSGT00510000048167.a
Elapidae_a	ANCESTRAL SPECIES		ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT01030000234641.a.b #23	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000166380	ENSGT00940000161152	ENSGT00510000048167.a
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00940000155157	ENSGT00940000161718	ENSGT00940000157052	ENSGT00390000011476 #7	ENSGT00500000044926 #9	ENSGT00940000155447 #10	ENSGT00390000004068 #12	ENSGT00940000158288 #13	ENSGT00940000156602 #14	ENSGT00390000017265 #15	ENSGT00940000155996 #16	ENSGT00940000159204 #18	ENSGT00940000154962.B	ENSGT00940000161426 #20	ENSGT00940000160702.b #21	ENSGT00940000153430.a.b #22	ENSGT00990000212952	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063 #25	ENSGT00950000183135.B.b	ENSGT00390000000403 #26	ENSGT00940000162008	ENSGT00940000164128.a	ENSGT00390000008978 #27	ENSGT00940000158482 #28	ENSGT00940000157425.B #29	ENSGT00390000017746 #30	ENSGT00940000157593 #31	ENSGT00940000166380	ENSGT00940000161152
Eastern brown snake	MODERN SPECIES	25	PLEKHA1 (ENSPTXG00000011895)	BTBD16 (ENSPTXG00000011894)	ENSPTXG00000011893	NSMCE4A (ENSPTXG00000011892) #7	ATE1 (ENSPTXG00000011891) #9	FGFR2 (ENSPTXG00000011890) #10	WDR11 (ENSPTXG00000011888) #12	PLPP4 (ENSPTXG00000011887) #13	SEC23IP (ENSPTXG00000011814) #14	MCMBP (ENSPTXG00000011480) #15	INPP5F (ENSPTXG00000011471) #16	BAG3 (ENSPTXG00000011470) #18	ENSPTXG00000011468	RGS10 (ENSPTXG00000011466) #20	GRK5 (ENSPTXG00000011455) #21	PRDX3 (ENSPTXG00000011454) #22	ENSPTXG00000011452	ENSPTXG00000011451	EIF3A (ENSPTXG00000011448) #25	NANOS1 (ENSPTXG00000011447)	CACUL1 (ENSPTXG00000011446) #26	PRLHR (ENSPTXG00000011444)	ENSPTXG00000011443	FAM204A (ENSPTXG00000011412) #27	ENSPTXG00000011411	RAB11FIP2 (ENSPTXG00000011410) #28	EMX2 (ENSPTXG00000011409) #29	PDZD8 (ENSPTXG00000011408) #30	SLC18A2 (ENSPTXG00000011407) #31	ENSPTXG00000003896	VAX1 (ENSPTXG00000003895)
Mainland tiger snake	MODERN SPECIES		ENSNSUG00000001053	NSMCE4A (ENSNSUG00000001055) #7	ATE1 (ENSNSUG00000001059) #9	FGFR2 (ENSNSUG00000001069) #10	WDR11 (ENSNSUG00000001076) #12	ENSNSUG00000001085	PLPP4 (ENSNSUG00000001090) #13	ENSNSUG00000001093	SEC23IP (ENSNSUG00000001094) #14	MCMBP (ENSNSUG00000001099) #15	INPP5F (ENSNSUG00000001107) #16	BAG3 (ENSNSUG00000001865) #18	ENSNSUG00000001866	RGS10 (ENSNSUG00000001871) #20	GRK5 (ENSNSUG00000001907) #21	PRDX3 (ENSNSUG00000002052) #22	ENSNSUG00000002054	ENSNSUG00000002056	ENSNSUG00000002060	EIF3A (ENSNSUG00000002061) #25	NANOS1 (ENSNSUG00000002068)	CACUL1 (ENSNSUG00000002070) #26	PRLHR (ENSNSUG00000002071)	ENSNSUG00000002074	FAM204A (ENSNSUG00000002075) #27	RAB11FIP2 (ENSNSUG00000002106) #28	EMX2 (ENSNSUG00000002110) #29	PDZD8 (ENSNSUG00000002119) #30	SLC18A2 (ENSNSUG00000002122) #31	ENSNSUG00000002140	VAX1 (ENSNSUG00000002145)
Blue-lipped sea krait	MODERN SPECIES	57																PRDX3 (ENSLLTG00000006322) #22	SFXN4 (ENSLLTG00000006331) #23	ENSLLTG00000006341	EIF3A (ENSLLTG00000006461) #25	NANOS1 (ENSLLTG00000011369)
Indian cobra	MODERN SPECIES	3	PLEKHA1 (ENSNNAG00000004758)	BTBD16 (ENSNNAG00000004840)	TACC2 (ENSNNAG00000004956)	ENSNNAG00000005253	ATE1 (ENSNNAG00000005291) #9	FGFR2 (ENSNNAG00000005354) #10	WDR11 (ENSNNAG00000005498) #12	PLPP4 (ENSNNAG00000005540) #13	SEC23IP (ENSNNAG00000005588) #14	MCMBP (ENSNNAG00000005668) #15	INPP5F (ENSNNAG00000005737) #16	BAG3 (ENSNNAG00000005857) #18	ENSNNAG00000005871	RGS10 (ENSNNAG00000005939) #20	GRK5 (ENSNNAG00000005954) #21	PRDX3 (ENSNNAG00000006010) #22	ENSNNAG00000006052 #23	ENSNNAG00000006074	EIF3A (ENSNNAG00000006102) #25	NANOS1 (ENSNNAG00000006194)	CACUL1 (ENSNNAG00000006225) #26	PRLHR (ENSNNAG00000006262)	ENSNNAG00000006264	FAM204A (ENSNNAG00000006282) #27	RAB11FIP2 (ENSNNAG00000006294) #28	ENSNNAG00000006305	EMX2 (ENSNNAG00000006312) #29	PDZD8 (ENSNNAG00000006337) #30	ENSNNAG00000006354	SLC18A2 (ENSNNAG00000006365) #31	ENSNNAG00000006416
Lizard	MODERN SPECIES	1012												ENSACAG00000041317	ENSACAG00000028667	ENSACAG00000038238	GRK5 (ENSACAG00000016904) #21	PRDX3 (ENSACAG00000045011) #22	SFXN4 (ENSACAG00000016888) #23	EIF3A (ENSACAG00000016784) #25	NANOS1 (ENSACAG00000027867)	ENSACAG00000034757	ENSACAG00000040497	CACUL1 (ENSACAG00000045158) #26
tuatara	MODERN SPECIES	1076					PLPP4 (ENSSPUG00000002589) #13	ENSSPUG00000002567	ENSSPUG00000002547 #14	ENSSPUG00000002532 #14	MCMBP (ENSSPUG00000002507) #15	ENSSPUG00000002497	ENSSPUG00000002438 #16	ENSSPUG00000002428 #18	TIAL1 (ENSSPUG00000002412) #19	ENSSPUG00000002373	GRK5 (ENSSPUG00000002329) #21	PRDX3 (ENSSPUG00000002313) #22	ENSSPUG00000002301 #23	ENSSPUG00000002293	NANOS1 (ENSSPUG00000002169)	CACUL1 (ENSSPUG00000002151) #26	ENSSPUG00000002130	FAM204A (ENSSPUG00000002122) #27	RAB11FIP2 (ENSSPUG00000002112) #28	EMX2 (ENSSPUG00000002100) #29	PDZD8 (ENSSPUG00000002095) #30	SLC18A2 (ENSSPUG00000002088) #31	VAX1 (ENSSPUG00000002073)	SHTN1 (ENSSPUG00000002048)	ENO4 (ENSSPUG00000002021) #34	HSPA12A (ENSSPUG00000001968) #33	PNLIPRP2 (ENSSPUG00000001813) #36
Anura	ANCESTRAL SPECIES																	ENSGT00940000153430.a.b #22
Leishan spiny toad	MODERN SPECIES	9	ENSLLEG00000025943	ENSLLEG00000025200	ENSLLEG00000025109 #14	ENSLLEG00000025080	INPP5F (ENSLLEG00000024859) #16	ENSLLEG00000024822	ENSLLEG00000024791	ENSLLEG00000024683	ENSLLEG00000024666	ENSLLEG00000024598 #20	ENSLLEG00000024575	ENSLLEG00000024559	HSPA12A (ENSLLEG00000023942) #33	ENSLLEG00000023845	ENSLLEG00000023818	ENSLLEG00000023739 #22	ENSLLEG00000023725	EIF3A (ENSLLEG00000022347) #25	ENSLLEG00000022242	CACUL1 (ENSLLEG00000022078) #26	ENSLLEG00000022004	ENSLLEG00000021979	ENSLLEG00000021969	ENSLLEG00000021943	ENSLLEG00000021815 #27	ENSLLEG00000021789	ENSLLEG00000021765	ENSLLEG00000021752	ENSLLEG00000021677	SHTN1 (ENSLLEG00000020782)	ENSLLEG00000020520 #34
Coelacanth	MODERN SPECIES	729									SEC23IP (ENSLACG00000007486) #14	MCMBP (ENSLACG00000008760) #15	INPP5F (ENSLACG00000022273) #16	BAG3 (ENSLACG00000011309) #18	TIAL1 (ENSLACG00000011749) #19	RGS10 (ENSLACG00000012231) #20	GRK5 (ENSLACG00000013521) #21	PRDX3 (ENSLACG00000014651) #22	SFXN4 (ENSLACG00000014747) #23	dennd10 (ENSLACG00000014839)	EIF3A (ENSLACG00000014932) #25	NANOS1 (ENSLACG00000015195)