Muroidea	ANCESTRAL SPECIES	13	ENSGT00940000158132 #7	ENSGT00390000018904 #8	ENSGT00390000000360.r.b #9	ENSGT00390000006885.a #10	ENSGT00390000012647.d #11	ENSGT00940000154783.f #12	ENSGT00940000160294 #13	ENSGT00390000005685 #14	ENSGT00940000158744 #15	ENSGT00510000047092 #16	ENSGT00940000159803	ENSGT01100000263574.b.j #19	ENSGT01050000244815.B.a.a #20	ENSGT00410000025802.g.b #17	ENSGT00530000063808.a #23	ENSGT00530000063435.a #22	ENSGT00950000183004.a.a.a.b #24	ENSGT00950000182808.b.b #25	ENSGT00730000111022 #26	ENSGT00410000025802.g.a #27	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A #29	ENSGT00950000182994.B.a.a.a #30	ENSGT00940000156650 #31	ENSGT00390000018621 #32	ENSGT00950000182846.a.a.a.a.a #33	ENSGT00390000003897.s.b.a.b.b #34	ENSGT00390000002034 #35	ENSGT00940000153588.b #36	ENSGT00940000162426 #37	ENSGT00940000162843
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000158132 #7	ENSGT00390000018904 #8	ENSGT00390000000360.r.b.a.a #9	ENSGT00390000006885.a #10	ENSGT00390000012647.d #11	ENSGT00940000154783.f #12	ENSGT00940000160294 #13	ENSGT00390000005685 #14	ENSGT00940000158744 #15	ENSGT00510000047092 #16	ENSGT00940000159803	ENSGT01100000263574.b.j #19	ENSGT01050000244815.B.a.a #20	ENSGT00410000025802.g.b.q.a #17	ENSGT00530000063808.a #23	ENSGT00530000063435.a #22	ENSGT00950000183004.a.a.a.b #24	ENSGT00950000182808.b.b #25	ENSGT00730000111022 #26	ENSGT00410000025802.g.a #27	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A #29	ENSGT00950000182994.B.a.a.a #30	ENSGT00940000156650 #31	ENSGT00390000018621 #32	ENSGT00950000182846.a.a.a.a.a #33	ENSGT00390000003897.s.b.a.b.b #34	ENSGT00390000002034 #35	ENSGT00940000153588.b #36	ENSGT00940000162426 #37	ENSGT00940000162843
Murinae	ANCESTRAL SPECIES	14	ENSGT00390000012647.d #11	ENSGT00940000154783.f #12	ENSGT00940000160294 #13	ENSGT00390000005685 #14	ENSGT00940000158744 #15	ENSGT00510000047092 #16	ENSGT00940000159803	ENSGT00390000001700.a.b.b #18	ENSGT00390000000062.x.b.l.b	ENSGT00390000000062.x.b.k.b	ENSGT00390000016992	ENSGT01100000263574.b.j #19	ENSGT01050000244815.B.a.a #20	ENSGT00410000025802.g.b.q.a #17	ENSGT00530000063808.a #23	ENSGT00530000063435.a #22	ENSGT00950000183004.a.a.a.b #24	ENSGT00950000182808.b.b #25	ENSGT00730000111022 #26	ENSGT00410000025802.g.a #27	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A #29	ENSGT00950000182994.B.a.a.a #30	ENSGT00940000156650 #31	ENSGT00390000018621 #32	ENSGT00950000182846.a.a.a.a.a #33	ENSGT00390000003897.s.b.a.a.b ##34	ENSGT00390000002034 #35	ENSGT00940000153588.b #36	ENSGT00940000162426 #37	ENSGT00940000162843
Mus	ANCESTRAL SPECIES	9	ENSGT00940000158132 #7	ENSGT00390000018904 #8	ENSGT00390000000360.r.b.a.a #9	ENSGT00390000006885.a #10	ENSGT00390000012647.d #11	ENSGT00940000154783.f #12	ENSGT00940000160294 #13	ENSGT00390000005685 #14	ENSGT00940000158744 #15	ENSGT00510000047092 #16	ENSGT00940000159803	ENSGT01100000263574.b.j #19	ENSGT01050000244815.B.a.a #20	ENSGT00410000025802.g.b.q.a #17	ENSGT00530000063808.a #23	ENSGT00530000063435.a.o #22	ENSGT00950000183004.a.a.a.b #24	ENSGT00950000182808.b.b #25	ENSGT00730000111022 #26	ENSGT00410000025802.g.a #27	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A #29	ENSGT00950000182994.B.a.a.a #30	ENSGT00940000156650 #31	ENSGT00390000018621 #32	ENSGT00950000182846.a.a.a.a.a #33	ENSGT00390000003897.s.b.a.a.b ##34	ENSGT00390000002034 #35	ENSGT00940000153588.b #36	ENSGT00940000162426 #37	ENSGT00940000162843
Mus_A	ANCESTRAL SPECIES	15	ENSGT00390000006885.a #10	ENSGT00390000012647.d #11	ENSGT00940000154783.f #12	ENSGT00940000160294 #13	ENSGT00390000005685 #14	ENSGT00940000158744 #15	ENSGT00510000047092 #16	ENSGT00940000159803	ENSGT00390000001700.a.b.b #18	ENSGT00390000000062.x.b.l.b	ENSGT00390000000062.x.b.k.b	ENSGT01100000263574.b.j #19	ENSGT01050000244815.B.a.a #20	ENSGT00410000025802.g.b.q.a #17	ENSGT00530000063808.a #23	ENSGT00530000063435.a.o #22	ENSGT00950000183004.a.a.a.b #24	ENSGT00950000182808.b.b #25	ENSGT00730000111022 #26	ENSGT00410000025802.g.a #27	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A #29	ENSGT00950000182994.B.a.a.a #30	ENSGT00940000156650 #31	ENSGT00390000018621 #32	ENSGT00950000182846.a.a.a.a.a #33	ENSGT00390000003897.s.b.a.a.b ##34	ENSGT00390000002034 #35	ENSGT00940000153588.b #36	ENSGT00940000162426 #37	ENSGT00940000162843
Mus_B	ANCESTRAL SPECIES	14	ENSGT00390000018904 #8	ENSGT00390000000360.r.b.a.a #9	ENSGT00390000006885.a #10	ENSGT00390000012647.d #11	ENSGT00940000154783.f #12	ENSGT00940000160294 #13	ENSGT00390000005685 #14	ENSGT00940000158744 #15	ENSGT00510000047092 #16	ENSGT00940000159803	ENSGT00390000001700.a.b.b.o.a ##18	ENSGT01100000263574.b.j #19	ENSGT01050000244815.B.a.a #20	ENSGT00410000025802.g.b.q.a #17	ENSGT00530000063808.a #23	ENSGT00530000063435.a.o #22	ENSGT00950000183004.a.a.a.b #24	ENSGT00950000182808.b.b #25	ENSGT00730000111022 #26	ENSGT00410000025802.g.a #27	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A #29	ENSGT00950000182994.B.a.a.a #30	ENSGT00940000156650 #31	ENSGT00390000018621 #32	ENSGT00950000182846.a.a.a.a.a #33	ENSGT00390000003897.s.b.a.b.b #34	ENSGT00390000002034 #35	ENSGT00940000153588.b #36	ENSGT00940000162426 #37	ENSGT00940000162843
Mus_C	ANCESTRAL SPECIES	27	ENSGT00950000183097.a.a.a	ENSGT00940000158132 #7	ENSGT00390000018904 #8	ENSGT00390000000360.r.b.a.a #9	ENSGT00390000006885.a #10	ENSGT00390000012647.d #11	ENSGT00940000154783.f #12	ENSGT00940000160294 #13	ENSGT00390000005685 #14	ENSGT00940000158744 #15	ENSGT00510000047092 #16	ENSGT01100000263574.b.j #19	ENSGT01050000244815.B.a.a #20	ENSGT00410000025802.g.b.q.a #17	ENSGT00530000063808.a #23	ENSGT00530000063435.a.o #22	ENSGT00950000183004.a.a.a.b #24	ENSGT00950000182808.b.b #25	ENSGT00730000111022 #26	ENSGT00410000025802.g.a #27	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A #29	ENSGT00950000182994.B.a.a.a #30	ENSGT00940000156650 #31	ENSGT00390000018621 #32	ENSGT00950000182846.a.a.a.a.a #33	ENSGT00390000003897.s.b.a.b.b #34	ENSGT00390000002034 #35	ENSGT00940000153588.b #36	ENSGT00940000162426 #37	ENSGT00940000162843
spretus	MODERN SPECIES	19	Rab39b (MGP_SPRETEiJ_G0034360) #7	Vbp1 (MGP_SPRETEiJ_G0034359) #8	Brcc3 (MGP_SPRETEiJ_G0034358) #9	Mtcp1 (MGP_SPRETEiJ_G0034357) #10	Cmc4 (MGP_SPRETEiJ_G0034356) #11	Fundc2 (MGP_SPRETEiJ_G0034355) #12	F8 (MGP_SPRETEiJ_G0034354) #13	Smim9 (MGP_SPRETEiJ_G0034353) #14	Mpp1 (MGP_SPRETEiJ_G0034352) #15	Dkc1 (MGP_SPRETEiJ_G0034351) #16	MGP_SPRETEiJ_G0034348 #17	MGP_SPRETEiJ_G0034347 #18	Or13ae2 (MGP_SPRETEiJ_G0034346) #19	Or7r1 (MGP_SPRETEiJ_G0034345) #20	MGP_SPRETEiJ_G0034344 #21	G6pdx (MGP_SPRETEiJ_G0034343) #22	Ikbkg (MGP_SPRETEiJ_G0034342) #23	Fam3a (MGP_SPRETEiJ_G0034341) #24	Slc10a3 (MGP_SPRETEiJ_G0034340) #25	Ubl4a (MGP_SPRETEiJ_G0034339) #26	Lage3 (MGP_SPRETEiJ_G0034338) #27	Plxna3 (MGP_SPRETEiJ_G0034337) #28	Fam50a (MGP_SPRETEiJ_G0034336) #29	Gdi1 (MGP_SPRETEiJ_G0034335) #30	Atp6ap1 (MGP_SPRETEiJ_G0034334) #31	Tafazzin (MGP_SPRETEiJ_G0034333) #32	Dnase1l1 (MGP_SPRETEiJ_G0034332) #33	MGP_SPRETEiJ_G0034331 #34	Emd (MGP_SPRETEiJ_G0034330) #35	Flna (MGP_SPRETEiJ_G0034329) #36	Tktl1 (MGP_SPRETEiJ_G0034328) #37
Mus	ANCESTRAL SPECIES	14	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221	ENSGT00530000063435.a.p ##22	ENSGT00940000160197	ENSGT00940000153404.b	ENSGT00940000153648.b	ENSGT00390000013778	ENSGT00940000159709	ENSGT00940000156247	ENSGT00940000157949	ENSGT00940000157456	ENSGT00940000162884	ENSGT00940000162201	ENSGT00390000010054.b	ENSGT00390000017929	ENSGT00940000155358	ENSGT00590000083165	ENSGT00730000111066
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221	ENSGT00530000063435.a.p ##22	ENSGT00940000160197	ENSGT00940000153404.b	ENSGT00940000153648.b	ENSGT00390000013778	ENSGT00940000159709	ENSGT00940000156247	ENSGT00940000157949	ENSGT00940000157456	ENSGT00940000162884	ENSGT00940000162201	ENSGT00390000010054.b	ENSGT00390000017929	ENSGT00940000155358	ENSGT00590000083165	ENSGT00730000111066
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221	ENSGT00530000063435.a.p ##22	ENSGT00940000160197	ENSGT00940000153404.b	ENSGT00940000153648.b	ENSGT00390000013778	ENSGT00940000159709	ENSGT00940000156247	ENSGT00940000157949	ENSGT00940000157456	ENSGT00940000162884	ENSGT00940000162201	ENSGT00390000010054.b	ENSGT00390000017929	ENSGT00940000155358	ENSGT00590000083165	ENSGT00730000111066
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000162224	ENSGT00390000015958	ENSGT00940000157294	ENSGT00390000007332	ENSGT00390000010434.a	ENSGT00390000012556	ENSGT00390000004612	ENSGT00950000183177.a.a.b	ENSGT00940000159983	ENSGT00390000002398	ENSGT00390000005197.a.b	ENSGT01100000263563.c.b	ENSGT00390000015965	ENSGT00390000000214.a.b	ENSGT00940000157221	ENSGT00530000063435.a.p ##22	ENSGT00940000160197	ENSGT00940000153404.b	ENSGT00940000153648.b	ENSGT00390000013778	ENSGT00940000159709	ENSGT00940000156247	ENSGT00940000157949	ENSGT00940000157456	ENSGT00940000162884	ENSGT00940000162201	ENSGT00390000010054.b	ENSGT00390000017929	ENSGT00940000155358	ENSGT00590000083165	ENSGT00730000111066
spretus	MODERN SPECIES	14	Sod3 (MGP_SPRETEiJ_G0028210)	Ccdc149 (MGP_SPRETEiJ_G0028211)	Lgi2 (MGP_SPRETEiJ_G0028212)	Sepsecs (MGP_SPRETEiJ_G0028213)	Pi4k2b (MGP_SPRETEiJ_G0028214)	Zcchc4 (MGP_SPRETEiJ_G0028215)	Anapc4 (MGP_SPRETEiJ_G0028216)	Slc34a2 (MGP_SPRETEiJ_G0028217)	Sel1l3 (MGP_SPRETEiJ_G0028218)	Smim20 (MGP_SPRETEiJ_G0028219)	MGP_SPRETEiJ_G0028220	Cckar (MGP_SPRETEiJ_G0028221)	Tbc1d19 (MGP_SPRETEiJ_G0028222)	Stim2 (MGP_SPRETEiJ_G0028223)	Pcdh7 (MGP_SPRETEiJ_G0028224)	G6pd2 (MGP_SPRETEiJ_G0028225) ##22	Arap2 (MGP_SPRETEiJ_G0028226)	Dthd1 (MGP_SPRETEiJ_G0028227)	Nwd2 (MGP_SPRETEiJ_G0028228)	0610040J01Rik (MGP_SPRETEiJ_G0028229)	Rell1 (MGP_SPRETEiJ_G0028230)	Pgm2 (MGP_SPRETEiJ_G0028231)	Tbc1d1 (MGP_SPRETEiJ_G0028232)	Klf3 (MGP_SPRETEiJ_G0028233)	Tlr6 (MGP_SPRETEiJ_G0028235)	Fam114a1 (MGP_SPRETEiJ_G0028236)	MGP_SPRETEiJ_G0028237	Klhl5 (MGP_SPRETEiJ_G0028238)	Wdr19 (MGP_SPRETEiJ_G0028239)	Rfc1 (MGP_SPRETEiJ_G0028240)	Klb (MGP_SPRETEiJ_G0028241)