Chordata ANCESTRAL SPECIES ENSGT00940000153231.B #22 Vertebrata ANCESTRAL SPECIES ENSGT00940000153231.B #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163581 ENSGT00940000160560 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00390000004692.d.b ENSGT00390000004692.d.a ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000163583 Euteleostomi ANCESTRAL SPECIES 14 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163581 ENSGT00940000160560 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00390000004692.d.b ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000165852 ENSGT00940000157892 ENSGT00940000155151.b Actinopterygii ANCESTRAL SPECIES 57 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00390000004692.d.b ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000165852 ENSGT00940000157892 ENSGT00940000155151.b Neopterygii ANCESTRAL SPECIES 9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00390000011196 ENSGT00940000161527 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00390000004692.d.b ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000165852 ENSGT00940000157892 ENSGT00940000155151.b Osteoglossocephalai ANCESTRAL SPECIES 231 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT01100000263525.a.b.b.i ENSGT00390000007688 #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a.h ##30 Clupeocephala ANCESTRAL SPECIES 103 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 Euteleosteomorpha ANCESTRAL SPECIES 71 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00940000175306 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 Acanthomorphata ANCESTRAL SPECIES 54 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00940000175306 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 Euacanthomorphacea ANCESTRAL SPECIES 9 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00940000175306 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 Percomorphaceae ANCESTRAL SPECIES 12 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00940000175306 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00530000064273.a.b.q #26 ENSGT00940000175306 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00940000172623 ENSGT00940000175306 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 Eupercaria ANCESTRAL SPECIES 8 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Perciformes ANCESTRAL SPECIES 8 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Cottioidei ANCESTRAL SPECIES 5 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Stickleback MODERN SPECIES 8 srsf11 (ENSGACG00000009346) #7 ankrd13c (ENSGACG00000009375) #8 cthl (ENSGACG00000009382) #9 PTGER3 (ENSGACG00000009453) #10 zranb2 (ENSGACG00000009457) #11 negr1 (ENSGACG00000009483) #12 vtg3 (ENSGACG00000009490) #13 adgrl4 (ENSGACG00000009517) #14 ADGRL2 (ENSGACG00000009545) #15 ttll7 (ENSGACG00000009588) #16 ENSGACG00000009607 #17 samd13 (ENSGACG00000009628) #18 uox (ENSGACG00000009633) #19 DNASE2B (ENSGACG00000009671) #20 ENSGACG00000009676 #21 rpf1 (ENSGACG00000009686) #22 SPATA1 (ENSGACG00000009692) #23 ctbs (ENSGACG00000009697) #24 ENSGACG00000009711 #25 ENSGACG00000009769 #26 SSX2IP (ENSGACG00000009802) #27 ENSGACG00000009808 #28 lpar3 (ENSGACG00000009820) #29 mcoln2 (ENSGACG00000009823) #30 ENSGACG00000009829 #31 ftsj3 (ENSGACG00000009841) #32 plaat1 (ENSGACG00000009850) #33 mfn1b (ENSGACG00000009857) #34 GNB4 (ENSGACG00000009890) #35 ENSGACG00000009928 #36 aldh7a1 (ENSGACG00000009931) #37 Lumpfish MODERN SPECIES 19 ankrd13c (ENSCLMG00005016891) #8 cthl (ENSCLMG00005017022) #9 PTGER3 (ENSCLMG00005017139) #10 zranb2 (ENSCLMG00005017141) #11 negr1 (ENSCLMG00005017142) #12 vtg3 (ENSCLMG00005017157) #13 adgrl4 (ENSCLMG00005017804) #14 ADGRL2 (ENSCLMG00005017812) #15 ENSCLMG00005018911 ttll7 (ENSCLMG00005018913) #16 ENSCLMG00005018917 #17 samd13 (ENSCLMG00005019920) #18 uox (ENSCLMG00005019921) #19 DNASE2B (ENSCLMG00005019922) #20 ENSCLMG00005019923 #21 rpf1 (ENSCLMG00005019927) #22 ENSCLMG00005020133 ctbs (ENSCLMG00005020134) #24 ENSCLMG00005020145 #25 ENSCLMG00005020515 #25 SSX2IP (ENSCLMG00005022297) #27 ENSCLMG00005022300 #28 lpar3 (ENSCLMG00005022303) #29 mcoln2 (ENSCLMG00005022308) #30 ENSCLMG00005022343 #31 ftsj3 (ENSCLMG00005022345) #32 plaat1 (ENSCLMG00005022349) #33 mfn1b (ENSCLMG00005022361) #34 gnb4b (ENSCLMG00005022390) #35 actl6a (ENSCLMG00005022397) mrpl47 (ENSCLMG00005022398) Perciformes_a ANCESTRAL SPECIES 6 ENSGT00730000110872.b.cb #7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 ENSGT00940000156305 Pike perch MODERN SPECIES 21 srsf11 (ENSSLUG00000025666) #7 ankrd13c (ENSSLUG00000025656) #8 cthl (ENSSLUG00000025621) #9 PTGER3 (ENSSLUG00000025590) #10 zranb2 (ENSSLUG00000025587) #11 negr1 (ENSSLUG00000025577) #12 vtg3 (ENSSLUG00000025462) #13 adgrl4 (ENSSLUG00000025421) #14 ADGRL2 (ENSSLUG00000025404) #15 ttll7 (ENSSLUG00000025349) #16 ENSSLUG00000025276 #17 samd13 (ENSSLUG00000025240) #18 uox (ENSSLUG00000025234) #19 DNASE2B (ENSSLUG00000025228) #20 ENSSLUG00000025224 #21 rpf1 (ENSSLUG00000025214) #22 GNG5 (ENSSLUG00000025207) ctbs (ENSSLUG00000025206) #24 ENSSLUG00000025116 #25 ENSSLUG00000023237 #25 ENSSLUG00000021839 #25 ENSSLUG00000002230 #26 SSX2IP (ENSSLUG00000001036) #27 ENSSLUG00000001018 #28 lpar3 (ENSSLUG00000001005) #29 mcoln2 (ENSSLUG00000000987) #30 ENSSLUG00000000975 #31 ftsj3 (ENSSLUG00000000954) #32 plaat1 (ENSSLUG00000000941) #33 mfn1b (ENSSLUG00000000732) #34 gnb4b (ENSSLUG00000000612) #35 Channel bull blenny MODERN SPECIES 18 srsf11 (ENSCGOG00000022950) #7 ankrd13c (ENSCGOG00000022954) #8 cthl (ENSCGOG00000022995) #9 PTGER3 (ENSCGOG00000023021) #10 zranb2 (ENSCGOG00000023023) #11 negr1 (ENSCGOG00000023025) #12 vtg3 (ENSCGOG00000002798) #13 adgrl4 (ENSCGOG00000003657) #14 ADGRL2 (ENSCGOG00000003997) #15 ttll7 (ENSCGOG00000012830) #16 ENSCGOG00000013664 #17 samd13 (ENSCGOG00000014975) #18 uox (ENSCGOG00000014977) #19 DNASE2B (ENSCGOG00000015002) #20 ENSCGOG00000015007 #21 rpf1 (ENSCGOG00000015015) #22 GNG5 (ENSCGOG00000015045) ctbs (ENSCGOG00000015047) #24 vtg5 (ENSCGOG00000015326) #25 SSX2IP (ENSCGOG00000021754) #27 ENSCGOG00000021761 #28 lpar3 (ENSCGOG00000021762) #29 mcoln2 (ENSCGOG00000021766) #30 ENSCGOG00000021816 #31 ftsj3 (ENSCGOG00000021823) #32 plaat1 (ENSCGOG00000022068) #33 ENSCGOG00000022069 #34 aldh7a1 (ENSCGOG00000022072) #37 actl6a (ENSCGOG00000022076) mrpl47 (ENSCGOG00000022331) ndufb5 (ENSCGOG00000022356) Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Large yellow croaker MODERN SPECIES 489 ankrd13c (ENSLCRG00005022033) #8 cthl (ENSLCRG00005022023) #9 PTGER3 (ENSLCRG00005022021) #10 PTGER3 (ENSLCRG00005022020) #10 ENSLCRG00005022019 zranb2 (ENSLCRG00005022017) #11 negr1 (ENSLCRG00005022013) #12 vtg3 (ENSLCRG00005021853) #13 adgrl4 (ENSLCRG00005021826) #14 ADGRL2 (ENSLCRG00005018405) #15 ttll7 (ENSLCRG00005018290) #16 ENSLCRG00005018267 #17 samd13 (ENSLCRG00005018263) #18 uox (ENSLCRG00005018261) #19 ENSLCRG00005018257 #20 rpf1 (ENSLCRG00005018248) #22 ENSLCRG00005018245 ctbs (ENSLCRG00005018244) #24 vtg5 (ENSLCRG00005002592) #26 SSX2IP (ENSLCRG00005002119) #27 ENSLCRG00005002116 #28 lpar3 (ENSLCRG00005002114) #29 mcoln2 (ENSLCRG00005001967) #30 ENSLCRG00005001944 #31 ftsj3 (ENSLCRG00005001879) #32 plaat1 (ENSLCRG00005001849) #33 mfn1b (ENSLCRG00005001258) #34 gnb4b (ENSLCRG00005001142) #35 aldh7a1 (ENSLCRG00005001138) #37 actl6a (ENSLCRG00005001121) mrpl47 (ENSLCRG00005001117) European seabass MODERN SPECIES 17 SRSF11 (ENSDLAG00005013436) #7 ANKRD13C (ENSDLAG00005013474) #8 cthl (ENSDLAG00005013621) #9 PTGER3 (ENSDLAG00005014008) #10 zranb2 (ENSDLAG00005014012) #11 negr1 (ENSDLAG00005014031) #12 vtg3 (ENSDLAG00005014123) #13 adgrl4 (ENSDLAG00005016676) #14 ADGRL2 (ENSDLAG00005016946) #15 ENSDLAG00005021865 ttll7 (ENSDLAG00005021891) #16 ENSDLAG00005028948 #17 uox (ENSDLAG00005023025) #19 DNASE2B (ENSDLAG00005035035) #20 ENSDLAG00005023038 #21 rpf1 (ENSDLAG00005023048) #22 GNG5 (ENSDLAG00005023105) SPATA1 (ENSDLAG00005023108) #23 ctbs (ENSDLAG00005023117) #24 ENSDLAG00005023145 #25 ENSDLAG00005023651 #26 SSX2IP (ENSDLAG00005026007) #27 ENSDLAG00005026012 #28 lpar3 (ENSDLAG00005032639) #29 mcoln2 (ENSDLAG00005026024) #30 ENSDLAG00005026036 #31 ENSDLAG00005026040 #32 ENSDLAG00005026042 #33 MFN1 (ENSDLAG00005026049) #34 GNB4 (ENSDLAG00005026071) #35 ENSDLAG00005034805 #37 Gilthead seabream MODERN SPECIES 2 srsf11 (ENSSAUG00010027531) #7 ankrd13c (ENSSAUG00010027528) #8 cthl (ENSSAUG00010027505) #9 PTGER3 (ENSSAUG00010027498) #10 zranb2 (ENSSAUG00010027495) #11 negr1 (ENSSAUG00010027491) #12 vtg3 (ENSSAUG00010027429) #13 adgrl4 (ENSSAUG00010027417) #14 ADGRL2 (ENSSAUG00010026364) #15 ttll7 (ENSSAUG00010026265) #16 ENSSAUG00010026164 #17 samd13 (ENSSAUG00010026151) #18 uox (ENSSAUG00010026149) #19 DNASE2B (ENSSAUG00010026147) #20 ENSSAUG00010026145 #21 rpf1 (ENSSAUG00010026135) #22 GNG5 (ENSSAUG00010026133) SPATA1 (ENSSAUG00010026131) #23 ctbs (ENSSAUG00010026130) #24 ENSSAUG00010009522 #25 ENSSAUG00010009255 ENSSAUG00010009252 ENSSAUG00010008609 #26 SSX2IP (ENSSAUG00010008580) #27 ENSSAUG00010008574 #28 lpar3 (ENSSAUG00010008567) #29 mcoln2 (ENSSAUG00010008496) #30 ENSSAUG00010008489 #31 ENSSAUG00010008485 #31 ftsj3 (ENSSAUG00010008484) #32 plaat1 (ENSSAUG00010008482) #33 Ballan wrasse MODERN SPECIES 313 ENSLBEG00000026577 ttll7 (ENSLBEG00000026630) #16 ENSLBEG00000026718 #17 samd13 (ENSLBEG00000026763) #18 uox (ENSLBEG00000026784) #19 DNASE2B (ENSLBEG00000026802) #20 rpf1 (ENSLBEG00000026810) #22 ENSLBEG00000026829 SPATA1 (ENSLBEG00000026842) #23 ctbs (ENSLBEG00000026854) #24 ENSLBEG00000026893 #25 ENSLBEG00000026974 #26 SSX2IP (ENSLBEG00000027006) #27 ENSLBEG00000027030 #28 lpar3 (ENSLBEG00000027049) #29 mcoln2 (ENSLBEG00000027071) #30 ENSLBEG00000027107 #31 ftsj3 (ENSLBEG00000027142) #32 plaat1 (ENSLBEG00000027163) #33 mfn1b (ENSLBEG00000027183) #34 gnb4b (ENSLBEG00000027228) #35 aldh7a1 (ENSLBEG00000027262) #37 Tetraodontidae ANCESTRAL SPECIES 5 ENSGT00940000156442 ENSGT00390000018718 ENSGT00940000155941.A ENSGT00550000074851 ENSGT00940000159619.a ENSGT01050000244937.a.b.b ENSGT00940000153386.A ENSGT00940000156389.a ENSGT00390000004757 ENSGT00940000154942.f ENSGT00940000153664.B.q.a ENSGT00940000159144.C ENSGT00940000165727 ENSGT00940000164924.a.j ENSGT00940000164221.b ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 ENSGT00940000156305 Tetraodon MODERN SPECIES XXYLT1 (ENSTNIG00000013080) fam43a (ENSTNIG00000015571) lsg1 (ENSTNIG00000015570) ATP13A3 (ENSTNIG00000015569) opa1 (ENSTNIG00000015568) her6 (ENSTNIG00000015567) psmd1 (ENSTNIG00000015566) acap2b (ENSTNIG00000015565) ppp1r2 (ENSTNIG00000015564) ENSTNIG00000015563 ENSTNIG00000002335 ENSTNIG00000015561 ENSTNIG00000015560 ENSTNIG00000015559 ENSTNIG00000001300 rpf1 (ENSTNIG00000015558) #22 GNG5 (ENSTNIG00000015557) SPATA1 (ENSTNIG00000015556) #23 ctbs (ENSTNIG00000015555) #24 vtg5 (ENSTNIG00000000613) #25 SSX2IP (ENSTNIG00000015554) #27 ENSTNIG00000015553 #28 lpar3 (ENSTNIG00000015552) #29 mcoln2 (ENSTNIG00000015551) #30 ENSTNIG00000015550 #31 ftsj3 (ENSTNIG00000015549) #32 mfn1b (ENSTNIG00000015548) #34 gnb4b (ENSTNIG00000015547) #35 aldh7a1 (ENSTNIG00000000110) #37 actl6a (ENSTNIG00000015546) mrpl47 (ENSTNIG00000015545) Fugu MODERN SPECIES 12 rnf13 (ENSTRUG00000017419) pfn2a (ENSTRUG00000017427) ENSTRUG00000017428 ENSTRUG00000017429 ENSTRUG00000028231 ENSTRUG00000017430 ENSTRUG00000002443 ENSTRUG00000026381 ENSTRUG00000028127 ENSTRUG00000029726 ENSTRUG00000017431 ENSTRUG00000022480 ENSTRUG00000027643 ENSTRUG00000023358 ENSTRUG00000017463 rpf1 (ENSTRUG00000023749) #22 ENSTRUG00000020907 SPATA1 (ENSTRUG00000017464) #23 ctbs (ENSTRUG00000017471) #24 vtg5 (ENSTRUG00000017475) #25 SSX2IP (ENSTRUG00000017514) #27 lpar3 (ENSTRUG00000017535) #29 mcoln2 (ENSTRUG00000017541) #30 ENSTRUG00000017546 #31 ftsj3 (ENSTRUG00000017550) #32 plaat1 (ENSTRUG00000017562) #33 mfn1b (ENSTRUG00000017563) #34 gnb4b (ENSTRUG00000017578) #35 aldh7a1 (ENSTRUG00000017585) #37 actl6a (ENSTRUG00000017587) mrpl47 (ENSTRUG00000017597) Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01010000222545 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 Anabantaria ANCESTRAL SPECIES 7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01010000222545 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Anabantoidei ANCESTRAL SPECIES 6 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01010000222545 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Climbing perch MODERN SPECIES 17 CTH (ENSATEG00000011607) #9 CTH (ENSATEG00000011460) #9 PTGER3 (ENSATEG00000011448) #10 zranb2 (ENSATEG00000011416) #11 negr1 (ENSATEG00000011369) #12 vtg3 (ENSATEG00000011276) #13 adgrl4 (ENSATEG00000011257) #14 ENSATEG00000011245 ADGRL2 (ENSATEG00000011184) #15 ttll7 (ENSATEG00000011114) #16 ENSATEG00000011104 #17 samd13 (ENSATEG00000011092) #18 ENSATEG00000011068 #19 DNASE2B (ENSATEG00000010909) #20 ENSATEG00000010897 #21 RPF1 (ENSATEG00000026588) #22 GNG5 (ENSATEG00000003761) CTBS (ENSATEG00000010737) #24 ENSATEG00000010641 #25 ENSATEG00000010547 #26 ENSATEG00000026893 ENSATEG00000005731 SSX2IP (ENSATEG00000010459) #27 ENSATEG00000010269 #28 lpar3 (ENSATEG00000026676) #29 mcoln2 (ENSATEG00000010205) #30 ENSATEG00000010110 #31 ENSATEG00000010187 #31 ENSATEG00000010069 #32 ENSATEG00000010040 #33 MFN1 (ENSATEG00000009967) #34 Siamese fighting fish MODERN SPECIES 15 XXYLT1 (ENSBSLG00000002765) srsf11 (ENSBSLG00000002635) #7 ankrd13c (ENSBSLG00000002296) #8 cthl (ENSBSLG00000001469) #9 PTGER3 (ENSBSLG00000001303) #10 zranb2 (ENSBSLG00000001267) #11 negr1 (ENSBSLG00000001231) #12 adgrl4 (ENSBSLG00000001130) #14 ENSBSLG00000001122 ADGRL2 (ENSBSLG00000001000) #15 ttll7 (ENSBSLG00000000757) #16 ENSBSLG00000000605 #17 samd13 (ENSBSLG00000022725) #18 uox (ENSBSLG00000022712) #19 DNASE2B (ENSBSLG00000022690) #20 rpf1 (ENSBSLG00000022640) #22 ENSBSLG00000022632 ENSBSLG00000022621 #23 ctbs (ENSBSLG00000022611) #24 vtg5 (ENSBSLG00000020125) #26 SSX2IP (ENSBSLG00000020018) #27 lpar3 (ENSBSLG00000020010) #29 mcoln2 (ENSBSLG00000019907) #30 ENSBSLG00000019875 #31 ftsj3 (ENSBSLG00000019721) #32 mfn1b (ENSBSLG00000018717) #34 gnb4b (ENSBSLG00000018674) #35 aldh7a1 (ENSBSLG00000018660) #37 actl6a (ENSBSLG00000018405) mrpl47 (ENSBSLG00000018368) ndufb5 (ENSBSLG00000018346) Zig-zag eel MODERN SPECIES 18 CTH (ENSMAMG00000022367) #9 CTH (ENSMAMG00000022365) #9 ENSMAMG00000022363 PTGER3 (ENSMAMG00000026906) #10 zranb2 (ENSMAMG00000022361) #11 negr1 (ENSMAMG00000022359) #12 vtg3 (ENSMAMG00000022353) #13 adgrl4 (ENSMAMG00000022351) #14 ADGRL2 (ENSMAMG00000022350) #15 ttll7 (ENSMAMG00000022349) #16 ENSMAMG00000022348 #17 samd13 (ENSMAMG00000025313) #18 ENSMAMG00000028437 #19 DNASE2B (ENSMAMG00000022345) #20 ENSMAMG00000022344 #21 rpf1 (ENSMAMG00000022342) #22 ENSMAMG00000022331 SPATA1 (ENSMAMG00000022329) #23 ctbs (ENSMAMG00000028724) #24 ENSMAMG00000022321 #25 ENSMAMG00000022318 ENSMAMG00000022317 ENSMAMG00000025391 ENSMAMG00000022311 ENSMAMG00000022308 ENSMAMG00000022305 ENSMAMG00000022303 ENSMAMG00000027860 ENSMAMG00000022297 ENSMAMG00000022289 ENSMAMG00000022285 Carangaria ANCESTRAL SPECIES 7 ENSGT00730000110872.b.cb #7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 Carangaria_A ANCESTRAL SPECIES 3 ENSGT00730000110872.b.cb #7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 Seriola ANCESTRAL SPECIES ENSGT00730000110872.b.cb #7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 Greater amberjack MODERN SPECIES srsf11 (ENSSDUG00000004582) #7 ankrd13c (ENSSDUG00000004522) #8 cthl (ENSSDUG00000004470) #9 PTGER3 (ENSSDUG00000004455) #10 zranb2 (ENSSDUG00000004390) #11 negr1 (ENSSDUG00000004329) #12 vtg3 (ENSSDUG00000004255) #13 adgrl4 (ENSSDUG00000004200) #14 ADGRL2 (ENSSDUG00000004121) #15 ttll7 (ENSSDUG00000004052) #16 ENSSDUG00000004000 #17 samd13 (ENSSDUG00000003985) #18 uox (ENSSDUG00000003971) #19 DNASE2B (ENSSDUG00000003956) #20 ENSSDUG00000003932 #21 rpf1 (ENSSDUG00000003879) #22 ENSSDUG00000003858 SPATA1 (ENSSDUG00000003840) #23 ctbs (ENSSDUG00000003817) #24 ENSSDUG00000003732 #25 ENSSDUG00000003716 ENSSDUG00000003646 #26 SSX2IP (ENSSDUG00000003612) #27 ENSSDUG00000003528 #28 lpar3 (ENSSDUG00000003505) #29 mcoln2 (ENSSDUG00000003489) #30 ENSSDUG00000003422 #31 ftsj3 (ENSSDUG00000003385) #32 plaat1 (ENSSDUG00000003364) #33 ENSSDUG00000003347 mfn1b (ENSSDUG00000003272) #34 Yellowtail amberjack MODERN SPECIES 2246 rpf1 (ENSSLDG00000018407) #22 ENSSLDG00000018398 SPATA1 (ENSSLDG00000018380) #23 ctbs (ENSSLDG00000018348) #24 ENSSLDG00000018291 #25 ENSSLDG00000018264 ENSSLDG00000018203 #26 SSX2IP (ENSSLDG00000018175) #27 ENSSLDG00000018069 #28 lpar3 (ENSSLDG00000018044) #29 mcoln2 (ENSSLDG00000018022) #30 ENSSLDG00000018005 #31 ftsj3 (ENSSLDG00000017970) #32 plaat1 (ENSSLDG00000017956) #33 mfn1b (ENSSLDG00000017886) #34 gnb4b (ENSSLDG00000017829) #35 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 43 ankrd13c (ENSLCAG00010013248) #8 cthl (ENSLCAG00010013306) #9 PTGER3 (ENSLCAG00010013332) #10 zranb2 (ENSLCAG00010013335) #11 negr1 (ENSLCAG00010013341) #12 vtg3 (ENSLCAG00010013371) #13 adgrl4 (ENSLCAG00010013502) #14 ADGRL2 (ENSLCAG00010013738) #15 ttll7 (ENSLCAG00010014662) #16 ENSLCAG00010015104 #17 samd13 (ENSLCAG00010015281) #18 uox (ENSLCAG00010015282) #19 DNASE2B (ENSLCAG00010015285) #20 ENSLCAG00010015287 #21 ENSLCAG00010015290 #21 rpf1 (ENSLCAG00010015306) #22 ENSLCAG00010015335 ENSLCAG00010015341 #23 ctbs (ENSLCAG00010015347) #24 ENSLCAG00010015942 #25 ENSLCAG00010019900 #26 SSX2IP (ENSLCAG00010022080) #27 ENSLCAG00010022095 #28 lpar3 (ENSLCAG00010022128) #29 mcoln2 (ENSLCAG00010022143) #30 ENSLCAG00010022203 #31 ftsj3 (ENSLCAG00010022212) #32 plaat1 (ENSLCAG00010022229) #33 mfn1b (ENSLCAG00010022363) #34 gnb4b (ENSLCAG00010022759) #35 actl6a (ENSLCAG00010022856) Barramundi perch MODERN SPECIES 1055 rpf1 (ENSLCAG00010020915) #22 ENSLCAG00010020904 Pleuronectoidei ANCESTRAL SPECIES 30 ENSGT00940000158154 ENSGT00730000110872.b.cb #7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Turbot MODERN SPECIES 3 ADGRL2 (ENSSMAG00000002158) #15 adgrl4 (ENSSMAG00000002535) #14 vtg3 (ENSSMAG00000002562) #13 negr1 (ENSSMAG00000002645) #12 zranb2 (ENSSMAG00000022391) #11 PTGER3 (ENSSMAG00000002690) #10 cthl (ENSSMAG00000002699) #9 ANKRD13C (ENSSMAG00000002741) #8 SRSF11 (ENSSMAG00000030705) #7 XXYLT1 (ENSSMAG00000036746) ENSSMAG00000021957 ENSSMAG00000025599 lsg1 (ENSSMAG00000036132) ENSSMAG00000024648 ENSSMAG00000024116 rpf1 (ENSSMAG00000035103) #22 ENSSMAG00000024008 SPATA1 (ENSSMAG00000031286) #23 ctbs (ENSSMAG00000022367) #24 ENSSMAG00000026394 #25 SSX2IP (ENSSMAG00000030548) #27 ENSSMAG00000032270 #26 ENSSMAG00000033559 #28 mcoln2 (ENSSMAG00000002779) #30 ENSSMAG00000002817 #31 ENSSMAG00000002863 #32 ENSSMAG00000002891 #33 MFN1 (ENSSMAG00000002898) #34 GNB4 (ENSSMAG00000002943) #35 ENSSMAG00000002982 #37 actl6a (ENSSMAG00000002988) Tongue sole MODERN SPECIES 11 XXYLT1 (ENSCSEG00000008543) srsf11 (ENSCSEG00000008551) #7 ankrd13c (ENSCSEG00000008576) #8 cthl (ENSCSEG00000008598) #9 PTGER3 (ENSCSEG00000008621) #10 zranb2 (ENSCSEG00000008624) #11 negr1 (ENSCSEG00000008631) #12 vtg3 (ENSCSEG00000008649) #13 adgrl4 (ENSCSEG00000008702) #14 ADGRL2 (ENSCSEG00000008720) #15 ttll7 (ENSCSEG00000008975) #16 ENSCSEG00000009063 #17 samd13 (ENSCSEG00000009095) #18 uox (ENSCSEG00000009108) #19 DNASE2B (ENSCSEG00000009124) #20 rpf1 (ENSCSEG00000009153) #22 ENSCSEG00000009176 SPATA1 (ENSCSEG00000009187) #23 ctbs (ENSCSEG00000009204) #24 ENSCSEG00000009586 #25 ENSCSEG00000013062 ENSCSEG00000013068 #26 SSX2IP (ENSCSEG00000013098) #27 nexn (ENSCSEG00000013104) tab3 (ENSCSEG00000013111) CACNA1E (ENSCSEG00000013120) soat1 (ENSCSEG00000013159) abl2 (ENSCSEG00000013183) osbpl9 (ENSCSEG00000013213) tor3a (ENSCSEG00000013288) calr (ENSCSEG00000013308) Ovalentaria ANCESTRAL SPECIES 9 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00530000064273.a.b.q #26 ENSGT00940000175306 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00940000175306 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 Pomacentridae ANCESTRAL SPECIES 70 ENSGT00730000110872.b.cb #7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT01100000263483.E.b.b.o ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 Pomacentridae_A ANCESTRAL SPECIES 167 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT01100000263483.E.b.b.o Amphiprion ANCESTRAL SPECIES 102 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00940000181139 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT01100000263483.E.b.b.o.c.b ENSGT00940000161021.a.a ENSGT00390000000289 Clown anemonefish MODERN SPECIES 3149 DNASE2B (ENSAOCG00000002309) #20 ENSAOCG00000012119 #21 rpf1 (ENSAOCG00000012163) #22 ENSAOCG00000000748 Orange clownfish MODERN SPECIES 11 ndufb5 (ENSAPEG00000005845) mrpl47 (ENSAPEG00000005830) actl6a (ENSAPEG00000005765) gnb4b (ENSAPEG00000005682) #35 mfn1b (ENSAPEG00000005600) #34 plaat1 (ENSAPEG00000005564) #33 ENSAPEG00000005551 adgrl4 (ENSAPEG00000005492) #14 ADGRL2 (ENSAPEG00000005297) #15 ttll7 (ENSAPEG00000005189) #16 ENSAPEG00000005131 #17 samd13 (ENSAPEG00000005092) #18 uox (ENSAPEG00000005071) #19 DNASE2B (ENSAPEG00000004998) #20 ENSAPEG00000004955 #21 rpf1 (ENSAPEG00000004908) #22 ENSAPEG00000004890 SPATA1 (ENSAPEG00000004853) #23 ctbs (ENSAPEG00000004831) #24 ENSAPEG00000004746 #25 ENSAPEG00000004652 #26 ENSAPEG00000004607 SSX2IP (ENSAPEG00000004597) #27 ENSAPEG00000004443 #28 ENSAPEG00000004413 ENSAPEG00000004383 ENSAPEG00000004377 lpar3 (ENSAPEG00000004370) #29 mcoln2 (ENSAPEG00000004309) #30 ENSAPEG00000004281 #31 ftsj3 (ENSAPEG00000004250) #32 Spiny chromis MODERN SPECIES 1834 ENSAPOG00000022110 #21 rpf1 (ENSAPOG00000022055) #22 ENSAPOG00000022021 ENSAPOG00000021958 #23 ctbs (ENSAPOG00000021944) #24 ENSAPOG00000021925 #25 ENSAPOG00000021898 ENSAPOG00000021867 #26 Bicolor damselfish MODERN SPECIES 1371 ttll7 (ENSSPAG00000001758) #16 ENSSPAG00000001679 #17 samd13 (ENSSPAG00000001663) #18 uox (ENSSPAG00000001633) #19 DNASE2B (ENSSPAG00000001624) #20 ENSSPAG00000001614 #21 rpf1 (ENSSPAG00000001593) #22 Cichlidae ANCESTRAL SPECIES 17 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00940000175306 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.j #31 ENSGT00940000165672.i #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00940000175306 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.j #31 ENSGT00940000157095 ENSGT00390000000191.l ENSGT00550000074838 ENSGT00390000001397 ENSGT00940000166880 Nile tilapia MODERN SPECIES 6 ptger3 (ENSONIG00000027660) #10 zranb2 (ENSONIG00000002662) #11 ENSONIG00000035052 negr1 (ENSONIG00000002666) #12 vtg3 (ENSONIG00000002670) #13 adgrl4 (ENSONIG00000002680) #14 ADGRL2 (ENSONIG00000002688) #15 ENSONIG00000041452 ENSONIG00000036779 ttll7 (ENSONIG00000002698) #16 ENSONIG00000007412 #17 samd13 (ENSONIG00000007411) #18 uox (ENSONIG00000007409) #19 DNASE2B (ENSONIG00000007405) #20 ENSONIG00000032547 #21 rpf1 (ENSONIG00000007393) #22 GNG5 (ENSONIG00000040622) SPATA1 (ENSONIG00000007390) #23 ctbs (ENSONIG00000029529) #24 ENSONIG00000007369 #25 ENSONIG00000037936 ENSONIG00000028600 ENSONIG00000033384 ENSONIG00000007355 #26 SSX2IP (ENSONIG00000007351) #27 lpar3 (ENSONIG00000028268) #29 mcoln2 (ENSONIG00000007344) #30 tomm70a (ENSONIG00000009701) tbc1d23 (ENSONIG00000007336) nit2 (ENSONIG00000007332) GTPBP6 (ENSONIG00000007330) Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00940000175306 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.j #31 ENSGT00940000157095 ENSGT00390000000191.l ENSGT00550000074838 ENSGT00390000001397 ENSGT00940000166880 Haplochromini ANCESTRAL SPECIES 23 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.j #31 ENSGT00940000157095 ENSGT00390000000191.l ENSGT00550000074838 ENSGT00390000001397 ENSGT00940000166880 ENSGT00940000165051 Burton s mouthbrooder MODERN SPECIES 325 PTGER3 (ENSHBUG00000014251) #10 zranb2 (ENSHBUG00000014237) #11 negr1 (ENSHBUG00000014226) #12 vtg3 (ENSHBUG00000014203) #13 adgrl4 (ENSHBUG00000014188) #14 ADGRL2 (ENSHBUG00000014145) #15 ENSHBUG00000013871 ttll7 (ENSHBUG00000013833) #16 ENSHBUG00000013715 #17 uox (ENSHBUG00000013645) #19 samd13 (ENSHBUG00000013620) #18 DNASE2B (ENSHBUG00000013603) #20 ENSHBUG00000013594 #21 rpf1 (ENSHBUG00000013582) #22 ENSHBUG00000013543 SPATA1 (ENSHBUG00000013523) #23 ctbs (ENSHBUG00000013509) #24 ENSHBUG00000013481 #25 ENSHBUG00000013454 #26 SSX2IP (ENSHBUG00000013433) #27 lpar3 (ENSHBUG00000013423) #29 mcoln2 (ENSHBUG00000013416) #30 ENSHBUG00000000877 #31 tomm70a (ENSHBUG00000013352) tbc1d23 (ENSHBUG00000013303) nit2 (ENSHBUG00000013160) ENSHBUG00000013108 GTPBP6 (ENSHBUG00000013113) zgc:113223 (ENSHBUG00000001127) Haplochromini_A ANCESTRAL SPECIES 26 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00940000172623 ENSGT00940000175306 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.j #31 ENSGT00940000157095 ENSGT00390000000191.l ENSGT00550000074838 ENSGT00390000001397 P. nyererei MODERN SPECIES 356 ankrd13c (ENSPNYG00000021901) #8 cthl (ENSPNYG00000021920) #9 ENSPNYG00000021946 PTGER3 (ENSPNYG00000021955) #10 zranb2 (ENSPNYG00000021971) #11 negr1 (ENSPNYG00000021984) #12 vtg3 (ENSPNYG00000022359) #13 adgrl4 (ENSPNYG00000022822) #14 ADGRL2 (ENSPNYG00000022835) #15 ttll7 (ENSPNYG00000022854) #16 ENSPNYG00000022873 #17 samd13 (ENSPNYG00000022886) #18 uox (ENSPNYG00000022896) #19 DNASE2B (ENSPNYG00000022904) #20 ENSPNYG00000022910 #21 rpf1 (ENSPNYG00000022917) #22 ENSPNYG00000022926 SPATA1 (ENSPNYG00000022935) #23 ctbs (ENSPNYG00000022950) #24 ENSPNYG00000022970 #25 ENSPNYG00000023003 #26 ENSPNYG00000023009 ENSPNYG00000023019 SSX2IP (ENSPNYG00000023024) #27 lpar3 (ENSPNYG00000023034) #29 mcoln2 (ENSPNYG00000000359) #30 ENSPNYG00000000374 #31 ENSPNYG00000000382 tbc1d23 (ENSPNYG00000000399) nit2 (ENSPNYG00000000510) GTPBP6 (ENSPNYG00000000521) Haplochromini_B ANCESTRAL SPECIES 29 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00940000172623 ENSGT00940000175306 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.j #31 ENSGT00940000157095 ENSGT00390000000191.l ENSGT00550000074838 ENSGT00390000001397 Zebra mbuna MODERN SPECIES 1097 cthl (ENSMZEG00005017905) #9 PTGER3 (ENSMZEG00005017912) #10 zranb2 (ENSMZEG00005017916) #11 negr1 (ENSMZEG00005017924) #12 ENSMZEG00005017927 vtg3 (ENSMZEG00005018044) #13 adgrl4 (ENSMZEG00005025762) #14 ADGRL2 (ENSMZEG00005025763) #15 ENSMZEG00005025766 ttll7 (ENSMZEG00005025770) #16 ENSMZEG00005025778 #17 samd13 (ENSMZEG00005000077) #18 uox (ENSMZEG00005000099) #19 DNASE2B (ENSMZEG00005000166) #20 ENSMZEG00005000180 #21 rpf1 (ENSMZEG00005000192) #22 SPATA1 (ENSMZEG00005000262) #23 ENSMZEG00005000498 ctbs (ENSMZEG00005000517) #24 ENSMZEG00005000557 #25 tbc1d23 (ENSMZEG00005000721) nit2 (ENSMZEG00005002861) GTPBP6 (ENSMZEG00005002869) ENSMZEG00005002877 zgc:113223 (ENSMZEG00005002890) ENSMZEG00005002924 si:ch1073-67j19.2 (ENSMZEG00005002956) SLC39A3 (ENSMZEG00005002970) sgta (ENSMZEG00005002995) reep6 (ENSMZEG00005003003) ENSMZEG00005003014 Eastern happy MODERN SPECIES 6 PTGER3 (ENSACLG00000000902) #10 zranb2 (ENSACLG00000000916) #11 negr1 (ENSACLG00000001022) #12 vtg3 (ENSACLG00000001081) #13 adgrl4 (ENSACLG00000001121) #14 ENSACLG00000001282 ADGRL2 (ENSACLG00000001286) #15 ENSACLG00000001373 ENSACLG00000001380 ttll7 (ENSACLG00000001503) #16 ENSACLG00000001595 #17 samd13 (ENSACLG00000001618) #18 uox (ENSACLG00000001632) #19 DNASE2B (ENSACLG00000001686) #20 ENSACLG00000001695 #21 rpf1 (ENSACLG00000001707) #22 ENSACLG00000001744 SPATA1 (ENSACLG00000001767) #23 ctbs (ENSACLG00000001788) #24 ENSACLG00000001823 #25 ENSACLG00000001871 #26 SSX2IP (ENSACLG00000001905) #27 lpar3 (ENSACLG00000001929) #29 mcoln2 (ENSACLG00000001939) #30 ENSACLG00000002024 #31 tomm70a (ENSACLG00000002036) tbc1d23 (ENSACLG00000002068) nit2 (ENSACLG00000002208) GTPBP6 (ENSACLG00000002216) ENSACLG00000002233 ENSACLG00000002243 Lyretail cichlid MODERN SPECIES 312 ENSNBRG00000020213 #7 ankrd13c (ENSNBRG00000020163) #8 cthl (ENSNBRG00000020105) #9 PTGER3 (ENSNBRG00000020097) #10 zranb2 (ENSNBRG00000020083) #11 negr1 (ENSNBRG00000020056) #12 vtg3 (ENSNBRG00000018975) #13 adgrl4 (ENSNBRG00000018578) #14 ENSNBRG00000018564 ADGRL2 (ENSNBRG00000018535) #15 ttll7 (ENSNBRG00000018486) #16 ENSNBRG00000018458 #17 samd13 (ENSNBRG00000018445) #18 uox (ENSNBRG00000018421) #19 ENSNBRG00000018401 #21 rpf1 (ENSNBRG00000018350) #22 ENSNBRG00000018328 SPATA1 (ENSNBRG00000018279) #23 ctbs (ENSNBRG00000018196) #24 ENSNBRG00000018114 #25 ENSNBRG00000018034 #26 ENSNBRG00000018004 SSX2IP (ENSNBRG00000017940) #27 lpar3 (ENSNBRG00000017907) #29 mcoln2 (ENSNBRG00000017872) #30 ENSNBRG00000017847 #31 ENSNBRG00000017815 tomm70a (ENSNBRG00000017768) tbc1d23 (ENSNBRG00000017697) nit2 (ENSNBRG00000017660) GTPBP6 (ENSNBRG00000017629) Midas cichlid MODERN SPECIES 46 ENSACIG00000014401 ADGRL2 (ENSACIG00000014365) #15 ttll7 (ENSACIG00000014332) #16 ENSACIG00000014309 #17 samd13 (ENSACIG00000014291) #18 uox (ENSACIG00000014269) #19 DNASE2B (ENSACIG00000014203) #20 ENSACIG00000014182 #21 rpf1 (ENSACIG00000014158) #22 ENSACIG00000014101 SPATA1 (ENSACIG00000014083) #23 ctbs (ENSACIG00000014059) #24 ENSACIG00000013962 #25 ENSACIG00000013169 #26 SSX2IP (ENSACIG00000013016) #27 lpar3 (ENSACIG00000013001) #29 mcoln2 (ENSACIG00000012976) #30 ENSACIG00000012953 #31 ftsj3 (ENSACIG00000012880) #32 plaat1 (ENSACIG00000012853) #33 mfn1b (ENSACIG00000012823) #34 gnb4b (ENSACIG00000012802) #35 aldh7a1 (ENSACIG00000012753) #37 actl6a (ENSACIG00000012720) Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01010000222545 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00530000064273.a.b.q #26 ENSGT00940000175306 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Cyprinodontoidei ANCESTRAL SPECIES 10 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Poeciliinae ANCESTRAL SPECIES 7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000182110 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.d #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 Poecilia ANCESTRAL SPECIES 1 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.d #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a.m #35 ENSGT00940000154938 #37 ENSGT00940000156305 NAME_6 ANCESTRAL SPECIES 19 ENSGT00940000158154 ENSGT00730000110872.b.cb #7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.d #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a.m #35 ENSGT00940000154938 #37 ENSGT00940000156305 Amazon molly MODERN SPECIES 262 ankrd13c (ENSPFOG00000024050) #8 cthl (ENSPFOG00000022043) #9 PTGER3 (ENSPFOG00000023602) #10 zranb2 (ENSPFOG00000023402) #11 negr1 (ENSPFOG00000023511) #12 vtg3 (ENSPFOG00000022549) #13 adgrl4 (ENSPFOG00000023969) #14 ADGRL2 (ENSPFOG00000023060) #15 ttll7 (ENSPFOG00000023019) #16 ENSPFOG00000022720 #17 uox (ENSPFOG00000022493) #19 samd13 (ENSPFOG00000022415) #18 uox (ENSPFOG00000023873) #19 DNASE2B (ENSPFOG00000022147) #20 ENSPFOG00000022742 #21 rpf1 (ENSPFOG00000023197) #22 SPATA1 (ENSPFOG00000022616) #23 ctbs (ENSPFOG00000021999) #24 vtg5 (ENSPFOG00000022205) #26 SSX2IP (ENSPFOG00000024606) #27 lpar3 (ENSPFOG00000022716) #29 mcoln2 (ENSPFOG00000021900) #30 ENSPFOG00000022008 #31 ftsj3 (ENSPFOG00000023101) #32 plaat1 (ENSPFOG00000023685) #33 mfn1b (ENSPFOG00000024230) #34 gnb4b (ENSPFOG00000023342) #35 Sailfin molly MODERN SPECIES 1108 ENSPLAG00000007683 #17 samd13 (ENSPLAG00000007601) #18 uox (ENSPLAG00000007593) #19 DNASE2B (ENSPLAG00000007560) #20 ENSPLAG00000007449 #21 rpf1 (ENSPLAG00000007428) #22 GNG5 (ENSPLAG00000007393) SPATA1 (ENSPLAG00000007383) #23 ctbs (ENSPLAG00000007312) #24 ENSPLAG00000007041 #25 ENSPLAG00000004299 #26 SSX2IP (ENSPLAG00000003969) #27 lpar3 (ENSPLAG00000003959) #29 mcoln2 (ENSPLAG00000003947) #30 ENSPLAG00000003924 #31 ftsj3 (ENSPLAG00000003846) #32 plaat1 (ENSPLAG00000003828) #33 mfn1b (ENSPLAG00000003794) #34 ENSPLAG00000003727 #35 ENSPLAG00000003669 Guppy MODERN SPECIES 456 ENSPREG00000013468 ENSPREG00000013478 PTGER3 (ENSPREG00000013490) #10 zranb2 (ENSPREG00000013499) #11 negr1 (ENSPREG00000013534) #12 vtg3 (ENSPREG00000013593) #13 adgrl4 (ENSPREG00000013749) #14 ADGRL2 (ENSPREG00000013924) #15 ENSPREG00000014186 ttll7 (ENSPREG00000014272) #16 ENSPREG00000014452 #17 samd13 (ENSPREG00000014483) #18 uox (ENSPREG00000014497) #19 DNASE2B (ENSPREG00000014515) #20 ENSPREG00000014530 #21 rpf1 (ENSPREG00000014542) #22 GNG5 (ENSPREG00000014568) SPATA1 (ENSPREG00000014593) #23 ctbs (ENSPREG00000014613) #24 ENSPREG00000014647 #25 ENSPREG00000014715 #26 SSX2IP (ENSPREG00000014827) #27 lpar3 (ENSPREG00000014856) #29 ftsj3 (ENSPREG00000014874) #32 plaat1 (ENSPREG00000014900) #33 mfn1b (ENSPREG00000014938) #34 GNB4 (ENSPREG00000014995) #35 aldh7a1 (ENSPREG00000015029) #37 actl6a (ENSPREG00000015047) mrpl47 (ENSPREG00000015080) ndufb5 (ENSPREG00000015107) Platyfish MODERN SPECIES 23 ankrd13c (ENSXMAG00000005486) #8 cthl (ENSXMAG00000005461) #9 PTGER3 (ENSXMAG00000024829) #10 zranb2 (ENSXMAG00000005445) #11 ENSXMAG00000023959 negr1 (ENSXMAG00000008941) #12 vtg3 (ENSXMAG00000017870) #13 adgrl4 (ENSXMAG00000017894) #14 ADGRL2 (ENSXMAG00000017908) #15 ttll7 (ENSXMAG00000017924) #16 ENSXMAG00000017932 #17 uox (ENSXMAG00000025414) #19 samd13 (ENSXMAG00000017944) #18 DNASE2B (ENSXMAG00000017960) #20 ENSXMAG00000024128 #21 rpf1 (ENSXMAG00000017969) #22 ENSXMAG00000017980 SPATA1 (ENSXMAG00000017984) #23 ctbs (ENSXMAG00000026822) #24 ENSXMAG00000017992 #25 ENSXMAG00000024532 ENSXMAG00000024162 #26 SSX2IP (ENSXMAG00000018082) #27 lpar3 (ENSXMAG00000018102) #29 mcoln2 (ENSXMAG00000018106) #30 ENSXMAG00000018129 #31 ENSXMAG00000018130 #31 ENSXMAG00000018138 #31 ftsj3 (ENSXMAG00000018139) #32 plaat1 (ENSXMAG00000018167) #33 mfn1b (ENSXMAG00000018170) #34 NAME_4 ANCESTRAL SPECIES 109 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01010000222545 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00940000175669 ENSGT00940000175306 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 Mummichog MODERN SPECIES 2227 cthl (ENSFHEG00000003758) #9 PTGER3 (ENSFHEG00000003760) #10 zranb2 (ENSFHEG00000003774) #11 negr1 (ENSFHEG00000003835) #12 vtg3 (ENSFHEG00000003883) #13 adgrl4 (ENSFHEG00000003921) #14 ENSFHEG00000003937 ADGRL2 (ENSFHEG00000003963) #15 ttll7 (ENSFHEG00000004010) #16 ENSFHEG00000004065 #17 samd13 (ENSFHEG00000004077) #18 uox (ENSFHEG00000004097) #19 DNASE2B (ENSFHEG00000004170) #20 ENSFHEG00000004185 #21 ENSFHEG00000004192 rpf1 (ENSFHEG00000004209) #22 SPATA1 (ENSFHEG00000004218) #23 ctbs (ENSFHEG00000004240) #24 vtg5 (ENSFHEG00000004493) #25 Sheepshead minnow MODERN SPECIES 288 RAVER2 (ENSCVAG00000002687) jak1 (ENSCVAG00000002739) ak4 (ENSCVAG00000002745) ENSCVAG00000002748 DNAJC6 (ENSCVAG00000002755) lepr (ENSCVAG00000002765) lurap1 (ENSCVAG00000002771) ENSCVAG00000002776 ENSCVAG00000002780 ttll7 (ENSCVAG00000002801) #16 ENSCVAG00000002835 #17 samd13 (ENSCVAG00000002845) #18 uox (ENSCVAG00000002913) #19 DNASE2B (ENSCVAG00000002928) #20 ENSCVAG00000002943 #21 rpf1 (ENSCVAG00000000086) #22 ENSCVAG00000002968 SPATA1 (ENSCVAG00000002998) #23 ctbs (ENSCVAG00000003017) #24 vtg5 (ENSCVAG00000003051) #25 ENSCVAG00000003063 ENSCVAG00000003073 ENSCVAG00000000633 SSX2IP (ENSCVAG00000003092) #27 lpar3 (ENSCVAG00000003106) #29 mcoln2 (ENSCVAG00000003124) #30 ENSCVAG00000003132 #31 Aplocheiloidei ANCESTRAL SPECIES 3 ENSGT00730000110872.b.cb #7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q #26 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 ENSGT00390000013727.d.a #34 ENSGT01000000214413.b.a.a #35 ENSGT00940000154938 #37 ENSGT00940000156305 Mangrove rivulus MODERN SPECIES 25 srsf11 (ENSKMAG00000009775) #7 ankrd13c (ENSKMAG00000009854) #8 cthl (ENSKMAG00000009929) #9 PTGER3 (ENSKMAG00000009980) #10 zranb2 (ENSKMAG00000009987) #11 negr1 (ENSKMAG00000010019) #12 vtg3 (ENSKMAG00000010048) #13 adgrl4 (ENSKMAG00000010117) #14 ADGRL2 (ENSKMAG00000010214) #15 ttll7 (ENSKMAG00000010461) #16 ENSKMAG00000010661 #17 samd13 (ENSKMAG00000010692) #18 uox (ENSKMAG00000010716) #19 DNASE2B (ENSKMAG00000010748) #20 ENSKMAG00000010765 #21 rpf1 (ENSKMAG00000010792) #22 ENSKMAG00000010830 ENSKMAG00000010847 #23 ctbs (ENSKMAG00000010864) #24 ENSKMAG00000010968 #25 ENSKMAG00000011300 #26 Oryzias ANCESTRAL SPECIES 5 ENSGT00940000159489 ENSGT00940000166579 ENSGT00940000159134.r.a.b.b ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01010000222545 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q.h.b #26 ENSGT00940000175306.c.a ENSGT00530000064273.a.b.q.h.a #26 ENSGT00940000175306.d ENSGT00530000064273.a.b.q.g #26 ENSGT00940000175306.c.b ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.a #31 ENSGT00550000075004 #32 Oryzias_a ANCESTRAL SPECIES 14 ENSGT00940000159489 ENSGT00940000166579 ENSGT00940000159134.r.a.b.b ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01010000222545 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q.h.b #26 ENSGT00940000182110 ENSGT00530000064273.a.b.q.h.a #26 ENSGT00940000175306.d ENSGT00530000064273.a.b.q.g #26 ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.a #31 ENSGT00550000075004 #32 ENSGT00940000156634.a #33 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 2607 rpf1 (ENSOSIG00000004203) #22 Chinese medaka MODERN SPECIES 3130 rpf1 (ENSOSIG00000009564) #22 Japanese Medaka HdrR MODERN SPECIES 18 slc5a5 (ENSORLG00000006631) ENSORLG00000006586 ENSORLG00000025185 zranb2 (ENSORLG00000006527) #11 negr1 (ENSORLG00000006516) #12 vtg3 (ENSORLG00000006511) #13 adgrl4 (ENSORLG00000006488) #14 ENSORLG00000024088 ADGRL2 (ENSORLG00000006440) #15 ttll7 (ENSORLG00000006346) #16 ENSORLG00000006323 #17 samd13 (ENSORLG00000006301) #18 uox (ENSORLG00000006295) #19 DNASE2B (ENSORLG00000006278) #20 ENSORLG00000030095 #21 rpf1 (ENSORLG00000006245) #22 ENSORLG00000024321 SPATA1 (ENSORLG00000006225) #23 ctbs (ENSORLG00000006215) #24 vit-6 (ENSORLG00000006187) #25 ENSORLG00000018696 #26 ENSORLG00000024038 ENSORLG00000006099 #26 ENSORLG00000024084 ol-vit1 (ENSORLG00000006084) #26 SSX2IP (ENSORLG00000006011) #27 lpar3 (ENSORLG00000005998) #29 mcoln2 (ENSORLG00000005977) #30 ENSORLG00000005928 #31 ftsj3 (ENSORLG00000005910) #32 plaat1 (ENSORLG00000005879) #33 Oryzias_b ANCESTRAL SPECIES 15 ENSGT00940000159489 ENSGT00940000166579 ENSGT00940000159134.r.a.b.b ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00390000002634.a.f.a #21 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.j ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.r #25 ENSGT00530000064273.a.b.q.h.b #26 ENSGT00940000175306.c.a ENSGT00530000064273.a.b.q.h.a #26 ENSGT00530000064273.a.b.q.g #26 ENSGT00940000175306.c.b ENSGT00390000007688.a.a #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672.a #31 ENSGT00940000165672.b #31 ENSGT00550000075004 #32 Indian medaka MODERN SPECIES 13 slc5a5 (ENSOMEG00000019202) ENSOMEG00000019097 ENSOMEG00000019025 zranb2 (ENSOMEG00000019010) #11 negr1 (ENSOMEG00000018975) #12 vtg3 (ENSOMEG00000018931) #13 adgrl4 (ENSOMEG00000018882) #14 ADGRL2 (ENSOMEG00000000879) #15 ENSOMEG00000018407 ttll7 (ENSOMEG00000018374) #16 ENSOMEG00000018250 #17 samd13 (ENSOMEG00000018192) #18 uox (ENSOMEG00000018172) #19 DNASE2B (ENSOMEG00000018140) #20 ENSOMEG00000018125 #21 rpf1 (ENSOMEG00000018084) #22 SPATA1 (ENSOMEG00000018021) #23 ENSOMEG00000018000 ctbs (ENSOMEG00000017991) #24 ENSOMEG00000017938 #25 ENSOMEG00000017631 #26 ENSOMEG00000016456 ENSOMEG00000016378 #26 ENSOMEG00000015860 #26 ENSOMEG00000014740 ENSOMEG00000014709 #26 ENSOMEG00000014656 SSX2IP (ENSOMEG00000014636) #27 lpar3 (ENSOMEG00000014571) #29 mcoln2 (ENSOMEG00000014558) #30 ENSOMEG00000014512 #31 Javanese ricefish MODERN SPECIES 18 ENSOJAG00000024023 ENSOJAG00000024019 zranb2 (ENSOJAG00000024017) #11 negr1 (ENSOJAG00000024015) #12 ENSOJAG00000024012 vtg3 (ENSOJAG00000023964) #13 adgrl4 (ENSOJAG00000023926) #14 ENSOJAG00000023921 ADGRL2 (ENSOJAG00000023699) #15 ttll7 (ENSOJAG00000023390) #16 ENSOJAG00000023332 #17 samd13 (ENSOJAG00000023314) #18 uox (ENSOJAG00000023310) #19 DNASE2B (ENSOJAG00000023308) #20 ENSOJAG00000023301 #21 rpf1 (ENSOJAG00000023271) #22 GNG5 (ENSOJAG00000023254) ENSOJAG00000023249 #23 ctbs (ENSOJAG00000023243) #24 ENSOJAG00000022594 #25 ENSOJAG00000014012 ENSOJAG00000002435 #26 SSX2IP (ENSOJAG00000001905) #27 lpar3 (ENSOJAG00000001892) #29 mcoln2 (ENSOJAG00000001865) #30 ENSOJAG00000001847 #31 ENSOJAG00000001836 #31 ftsj3 (ENSOJAG00000001483) #32 plaat1 (ENSOJAG00000001390) #33 mfn1b (ENSOJAG00000000778) #34 gnb4b (ENSOJAG00000000392) #35 Tiger tail seahorse MODERN SPECIES 292 PTGER3 (ENSHCOG00000016945) #10 PTGER3 (ENSHCOG00000016955) #10 zranb2 (ENSHCOG00000017021) #11 HYKK (ENSHCOG00000017090) negr1 (ENSHCOG00000017102) #12 vtg3 (ENSHCOG00000017143) #13 adgrl4 (ENSHCOG00000017154) #14 ENSHCOG00000017167 ADGRL2 (ENSHCOG00000017200) #15 ttll7 (ENSHCOG00000017443) #16 prkacbb (ENSHCOG00000017468) #17 samd13 (ENSHCOG00000017487) #18 uox (ENSHCOG00000017513) #19 DNASE2B (ENSHCOG00000017517) #20 ENSHCOG00000017524 rpf1 (ENSHCOG00000017548) #22 SPATA1 (ENSHCOG00000017612) #23 ctbs (ENSHCOG00000017636) #24 mcoln2 (ENSHCOG00000017695) #30 lpar3 (ENSHCOG00000017705) #29 ENSHCOG00000017798 #28 SSX2IP (ENSHCOG00000017889) #27 SSX2IP (ENSHCOG00000017971) #27 ENSHCOG00000017986 SSX2IP (ENSHCOG00000018017) #27 ENSHCOG00000018035 ENSHCOG00000018104 #26 ENSHCOG00000018714 #25 ENSHCOG00000018760 #31 ftsj3 (ENSHCOG00000018770) #32 plaat1 (ENSHCOG00000018808) #33 Pinecone sodierfish MODERN SPECIES 18 XXYLT1 (ENSMMDG00005022478) srsf11 (ENSMMDG00005022477) #7 ankrd13c (ENSMMDG00005022473) #8 cthl (ENSMMDG00005022141) #9 PTGER3 (ENSMMDG00005022116) #10 zranb2 (ENSMMDG00005022114) #11 negr1 (ENSMMDG00005022113) #12 vtg3 (ENSMMDG00005018975) #13 adgrl4 (ENSMMDG00005018909) #14 ADGRL2 (ENSMMDG00005018902) #15 ttll7 (ENSMMDG00005018866) #16 ENSMMDG00005018193 #17 samd13 (ENSMMDG00005018187) #18 uox (ENSMMDG00005018185) #19 DNASE2B (ENSMMDG00005018184) #20 rpf1 (ENSMMDG00005018128) #22 ENSMMDG00005018125 ENSMMDG00005018124 #23 ctbs (ENSMMDG00005018122) #24 ENSMMDG00005018121 #25 ENSMMDG00005005269 #26 SSX2IP (ENSMMDG00005004995) #27 ENSMMDG00005004991 #28 lpar3 (ENSMMDG00005004935) #29 mcoln2 (ENSMMDG00005004762) #30 ENSMMDG00005004746 #31 ENSMMDG00005004741 #31 ENSMMDG00005004039 ftsj3 (ENSMMDG00005003992) #32 rnf13 (ENSMMDG00005003971) pfn2a (ENSMMDG00005003964) Cod MODERN SPECIES 3 SRSF11 (ENSGMOG00000015896) #7 ANKRD13C (ENSGMOG00000015926) #8 cthl (ENSGMOG00000015944) #9 PTGER3 (ENSGMOG00000015965) #10 zranb2 (ENSGMOG00000015970) #11 negr1 (ENSGMOG00000016002) #12 vtg3 (ENSGMOG00000016012) #13 adgrl4 (ENSGMOG00000016062) #14 ENSGMOG00000029796 ADGRL2 (ENSGMOG00000016096) #15 ttll7 (ENSGMOG00000016145) #16 ENSGMOG00000016208 #17 samd13 (ENSGMOG00000016240) #18 uox (ENSGMOG00000016248) #19 DNASE2B (ENSGMOG00000016266) #20 rpf1 (ENSGMOG00000016281) #22 ENSGMOG00000033403 SPATA1 (ENSGMOG00000029567) #23 ctbs (ENSGMOG00000016331) #24 ENSGMOG00000016347 #25 ENSGMOG00000016366 #25 ENSGMOG00000016966 #26 SSX2IP (ENSGMOG00000017036) #27 ENSGMOG00000017057 #28 lpar3 (ENSGMOG00000017100) #29 mcoln2 (ENSGMOG00000017109) #30 ENSGMOG00000017137 #31 ENSGMOG00000017184 #32 ENSGMOG00000017216 #33 MFN1 (ENSGMOG00000017233) #34 GNB4 (ENSGMOG00000017274) #35 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000153231.B #22 Salmoninae ANCESTRAL SPECIES 491 ENSGT00950000182930.B.d ENSGT00950000182899.C.a.d ENSGT00940000156941.d ENSGT00940000156162.C.c ENSGT00390000017571.n ENSGT00940000163206.b.a.a.e ENSGT00950000182977.B.b.a.c.a ENSGT01100000263533.b.b.a.b.a.b.a.b.b ENSGT00390000003324.db.a ENSGT01050000244939.a.a.b.a.b.h ENSGT00550000075121 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00940000159251.g ENSGT00390000017123.a.c ENSGT00530000063347.A.b.f ENSGT00940000153231.B #22 Salmoninae_a ANCESTRAL SPECIES 9 ENSGT00950000182930.B.d ENSGT00950000182899.C.a.d ENSGT00940000156941.d ENSGT00940000156162.C.c ENSGT00390000017571.n ENSGT00940000163206.b.a.a.e ENSGT00950000182977.B.b.a.c.a ENSGT01100000263533.b.b.a.b.a.b.a.b.b ENSGT00390000003324.db.a ENSGT01050000244939.a.a.b.a.b.h ENSGT00550000075121 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00940000159251.g ENSGT00390000017123.a.c ENSGT00530000063347.A.b.f ENSGT00940000153231.B #22 ENSGT00940000156906.j.a.a.d ENSGT00940000158798.k ENSGT00530000063187.B.c.h ENSGT00990000213115 ENSGT00940000154079.a.e.b ENSGT00940000155091.eb.a.c ENSGT00950000182951.B.g ENSGT01060000248544.a.a.b.a.b.j ENSGT00940000162061.a.a.f ENSGT00940000164279.b.e ENSGT00940000160907.k.e ENSGT00940000160836.d.b.b ENSGT00940000160836.d.b.a.a.l ENSGT00950000183161.b.k ENSGT00940000155005.c.a.a Salmo ANCESTRAL SPECIES 20 ENSGT00950000182930.B.d ENSGT00950000182899.C.a.d ENSGT00940000156941.d ENSGT00940000156162.C.c ENSGT00390000017571.n ENSGT00940000163206.b.a.a.e ENSGT00950000182977.B.b.a.c.a ENSGT01100000263533.b.b.a.b.a.b.a.b.b ENSGT00390000003324.db.a ENSGT01050000244939.a.a.b.a.b.h ENSGT00550000075121 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00940000159251.g ENSGT00390000017123.a.c ENSGT00530000063347.A.b.f ENSGT00940000153231.B #22 ENSGT00940000156906.j.a.a.d ENSGT00940000158798.k ENSGT00530000063187.B.c.h ENSGT00990000213115 ENSGT00940000155091.eb.a.c ENSGT00940000154079.a.e.b ENSGT00950000182951.B.g ENSGT01060000248544.a.a.b.a.b.j ENSGT00940000162061.a.a.f ENSGT00940000164279.b.e ENSGT00940000160907.k.e ENSGT00940000160836.d.b.b ENSGT00950000183161.b.k ENSGT00940000155005.c.a.a ENSGT00940000158561.a.d Atlantic salmon MODERN SPECIES 15 ENSSSAG00000068757 MCCA (ENSSSAG00000068531) ENSSSAG00000068425 ENSSSAG00000068412 ENSSSAG00000089031 ENSSSAG00000068393 ENSSSAG00000107583 dad1 (ENSSSAG00000068386) ENSSSAG00000067898 rabggta (ENSSSAG00000067852) cyp2ad2 (ENSSSAG00000067784) ENSSSAG00000084133 ENSSSAG00000063536 ENSSSAG00000109281 ENSSSAG00000046112 rpf1 (ENSSSAG00000059443) #22 ENSSSAG00000085632 ECHD2 (ENSSSAG00000058175) zyg11 (ENSSSAG00000057652) ENSSSAG00000058122 ralgps2 (ENSSSAG00000057071) fam20b (ENSSSAG00000057047) angptl1a (ENSSSAG00000057571) tnfl6 (ENSSSAG00000057042) jun (ENSSSAG00000057039) prdx6 (ENSSSAG00000057023) plpp6 (ENSSSAG00000057015) ENSSSAG00000091823 si:dkey-239i20.4 (ENSSSAG00000098502) ENSSSAG00000056849 ENSSSAG00000100361 River trout MODERN SPECIES 33 mccc1 (ENSSTUG00000004870) ATP11B (ENSSTUG00000004006) ENSSTUG00000003945 ENSSTUG00000003939 ENSSTUG00000003931 si:ch211-264f5.2 (ENSSTUG00000019039) ENSSTUG00000019025 dad1 (ENSSTUG00000019015) ENSSTUG00000018897 ENSSTUG00000018886 rabggta (ENSSTUG00000018836) cyp2ad3 (ENSSTUG00000018745) hook1 (ENSSTUG00000018502) ENSSTUG00000018482 IPO13 (ENSSTUG00000016807) rpf1 (ENSSTUG00000016115) #22 echdc2 (ENSSTUG00000015766) ENSSTUG00000015734 zyg11 (ENSSTUG00000015608) angptl1a (ENSSTUG00000015546) ralgps2 (ENSSTUG00000015083) fam20b (ENSSTUG00000015050) faslg (ENSSTUG00000015047) jun (ENSSTUG00000015041) prdx6 (ENSSTUG00000015011) plpp6 (ENSSTUG00000015002) si:dkey-239i20.4 (ENSSTUG00000014897) PRRC2C (ENSSTUG00000014731) ENSSTUG00000014714 vamp4 (ENSSTUG00000014705) myoc (ENSSTUG00000014699) Oncorhynchus ANCESTRAL SPECIES ENSGT00950000182930.B.d ENSGT00950000182899.C.a.d ENSGT00940000156941.d ENSGT00940000156162.C.c ENSGT00390000017571.n ENSGT00940000163206.b.a.a.e ENSGT00950000182977.B.b.a.c.a ENSGT01100000263533.b.b.a.b.a.b.a.b.b ENSGT00390000003324.db.a ENSGT01050000244939.a.a.b.a.b.h ENSGT00550000075121 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00940000159251.g ENSGT00390000017123.a.c ENSGT00530000063347.A.b.f ENSGT00940000153231.B #22 ENSGT00940000156906.j.a.a.d ENSGT00940000158798.k ENSGT00530000063187.B.c.h ENSGT00940000154079.a.e.b ENSGT00940000155091.eb.a.c ENSGT00950000182951.B.g ENSGT01060000248544.a.a.b.a.b.j ENSGT00940000162061.a.a.f ENSGT00940000164279.b.e ENSGT00940000160907.k.e ENSGT00940000160836.d.b.b ENSGT00940000160836.d.b.a.a.l ENSGT00950000183161.b.k ENSGT00940000155005.c.a.a ENSGT00940000158561.a.d Rainbow trout MODERN SPECIES 22 ENSOMYG00000053219 ENSOMYG00000033839 ENSOMYG00000034087 ENSOMYG00000034097 ENSOMYG00000034101 ENSOMYG00000034109 ENSOMYG00000034124 dad1 (ENSOMYG00000034133) ENSOMYG00000034175 ENSOMYG00000034232 cyp2ad2 (ENSOMYG00000034280) ENSOMYG00000070794 ENSOMYG00000034338 ENSOMYG00000034512 ENSOMYG00000034590 rpf1 (ENSOMYG00000034857) #22 ENSOMYG00000035876 ENSOMYG00000035860 zyg11 (ENSOMYG00000035955) ralgps2 (ENSOMYG00000036414) ENSOMYG00000050345 angptl1a (ENSOMYG00000036830) fam20b (ENSOMYG00000036843) ENSOMYG00000055648 ENSOMYG00000053826 faslg (ENSOMYG00000036854) jun (ENSOMYG00000036861) prdx6 (ENSOMYG00000036874) ENSOMYG00000056051 ENSOMYG00000075539 plpp6 (ENSOMYG00000036902) Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000182930.B.d ENSGT00950000182899.C.a.d ENSGT00940000156941.d ENSGT00940000156162.C.c ENSGT00390000017571.n ENSGT00940000163206.b.a.a.e ENSGT00950000182977.B.b.a.c.a ENSGT01100000263533.b.b.a.b.a.b.a.b.b ENSGT00390000003324.db.a ENSGT01050000244939.a.a.b.a.b.h ENSGT01020000230367.e.b.a.b.b.a.a.a.b.a.a.b.a ENSGT00550000075121 ENSGT00950000182879.a.b.a.a.b.b.b.b ENSGT00940000159251.g ENSGT00530000063347.A.b.f ENSGT00940000153231.B #22 ENSGT00940000156906.j.a.a.d ENSGT00940000158798.k ENSGT00530000063187.B.c.h ENSGT00940000154079.a.e.b ENSGT00940000155091.eb.a.c ENSGT00950000182951.B.g ENSGT01060000248544.a.a.b.a.b.j ENSGT00940000162061.a.a.f ENSGT00940000164279.b.e ENSGT00940000160907.k.e ENSGT00940000160836.d.b.b ENSGT00940000160836.d.b.a.a.l ENSGT00950000183161.b.k ENSGT00940000155005.c.a.a ENSGT00940000158561.a.d Coho salmon MODERN SPECIES 1 ENSOKIG00005014415 ENSOKIG00005014450 si:ch211-264f5.2 (ENSOKIG00005014455) ENSOKIG00005014467 dad1 (ENSOKIG00005014471) TGM1 (ENSOKIG00005014486) ENSOKIG00005014575 rabggta (ENSOKIG00005014587) cyp2ad2 (ENSOKIG00005014640) ENSOKIG00005014771 ENSOKIG00005014776 ENSOKIG00005014782 HOOK1 (ENSOKIG00005014787) ENSOKIG00005014945 IPO13 (ENSOKIG00005014967) rpf1 (ENSOKIG00005015098) #22 ENSOKIG00005016024 ENSOKIG00005016031 echdc2 (ENSOKIG00005016082) zyg11 (ENSOKIG00005016608) ENSOKIG00005016703 ralgps2 (ENSOKIG00005016729) angptl1a (ENSOKIG00005016824) fam20b (ENSOKIG00005016853) faslg (ENSOKIG00005016861) jun (ENSOKIG00005016866) prdx6 (ENSOKIG00005016873) plpp6 (ENSOKIG00005016911) ENSOKIG00005016929 ENSOKIG00005017051 VAMP4 (ENSOKIG00005017066) Chinook salmon MODERN SPECIES ENSOTSG00005022503 mccc1 (ENSOTSG00005022515) ATP11B (ENSOTSG00005026101) ENSOTSG00005026468 ENSOTSG00005026469 ENSOTSG00005026470 si:ch211-264f5.2 (ENSOTSG00005026471) ENSOTSG00005026472 dad1 (ENSOTSG00005026473) TGM1 (ENSOTSG00005026475) ENSOTSG00005026476 rabggta (ENSOTSG00005026477) cyp2ad3 (ENSOTSG00005026478) hook1 (ENSOTSG00005026676) IPO13 (ENSOTSG00005026818) rpf1 (ENSOTSG00005027108) #22 ENSOTSG00005027112 echdc2 (ENSOTSG00005027118) zyg11 (ENSOTSG00005027259) ralgps2 (ENSOTSG00005027260) angptl1a (ENSOTSG00005027261) faslg (ENSOTSG00005027262) jun (ENSOTSG00005027264) prdx6 (ENSOTSG00005027265) plpp6 (ENSOTSG00005027266) si:dkey-239i20.4 (ENSOTSG00005027267) ENSOTSG00005027293 ENSOTSG00005027312 vamp4 (ENSOTSG00005027313) myoc (ENSOTSG00005027319) itpa (ENSOTSG00005027322) Huchen MODERN SPECIES 200 ENSHHUG00000031980 mccc1 (ENSHHUG00000031545) ATP11B (ENSHHUG00000030910) impact (ENSHHUG00000030896) ENSHHUG00000030889 ENSHHUG00000030886 ENSHHUG00000030878 ENSHHUG00000030876 dad1 (ENSHHUG00000030863) TGM1 (ENSHHUG00000030743) rabggta (ENSHHUG00000030708) cyp2ad2 (ENSHHUG00000030518) hook1 (ENSHHUG00000030434) ENSHHUG00000030419 IPO13 (ENSHHUG00000030407) rpf1 (ENSHHUG00000030334) #22 ENSHHUG00000030327 septin3 (ENSHHUG00000030280) serhl (ENSHHUG00000030268) mb (ENSHHUG00000030266) Northern pike MODERN SPECIES 11 BSN (ENSELUG00000011162) osbpl2b (ENSELUG00000011101) SOGA1 (ENSELUG00000011077) acss2 (ENSELUG00000011045) ENSELUG00000010958 ENSELUG00000029703 ENSELUG00000010857 cttnbp2nlb (ENSELUG00000010842) capza1b (ENSELUG00000010804) ENSELUG00000010752 tlr9 (ENSELUG00000010669) ERC2 (ENSELUG00000010635) wnt5a (ENSELUG00000010521) CACNA2D3 (ENSELUG00000010147) LRTM1 (ENSELUG00000010099) rpf1 (ENSELUG00000001464) #22 parapinopsina (ENSELUG00000004654) BAP31 (ENSELUG00000032776) slc35a2 (ENSELUG00000001521) slc6a8 (ENSELUG00000010479) USP11 (ENSELUG00000010436) ENSELUG00000010401 zgc:86609 (ENSELUG00000010388) ENSELUG00000026224 uxt (ENSELUG00000001230) ENSELUG00000005052 ENSELUG00000005075 otud5a (ENSELUG00000005004) pim2 (ENSELUG00000004786) grm6a (ENSELUG00000004674) ENSELUG00000025738 Otomorpha ANCESTRAL SPECIES 53 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00940000155561.n ENSGT00950000182975.a.a.a.a.a ENSGT00940000158639 ENSGT00940000156834 ENSGT01060000248575.B ENSGT00940000161534 ENSGT00940000153391.c.b.b Otophysi ANCESTRAL SPECIES 146 ENSGT00940000164804.b ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.o #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00940000155561.n ENSGT00950000182975.a.a.a.a.a ENSGT00940000158639 ENSGT00940000156834 ENSGT01060000248575.B ENSGT00940000161534 ENSGT00940000153391.c.b.b Characiphysae ANCESTRAL SPECIES 20 ENSGT00730000111231 ENSGT00610000086173 ENSGT00940000158959.b.a ENSGT00940000164492.a.b ENSGT00940000160620 ENSGT00940000164804.b ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00940000175669 ENSGT00530000064273.a.b.o #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00940000155561.n ENSGT00950000182975.a.a.a.a.a ENSGT00940000158639 ENSGT00940000156834 ENSGT00940000153391.c.b.b ENSGT00940000159457 Characiphysae_b ANCESTRAL SPECIES 27 ENSGT00730000111231 ENSGT00610000086173 ENSGT00940000158959.b.a ENSGT00940000164492.a.b ENSGT00940000160620 ENSGT00940000164804.b ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.o #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00940000155561.n ENSGT00950000182975.a.a.a.a.a ENSGT00940000158639 ENSGT00940000156834 ENSGT00940000153391.c.b.b ENSGT00940000159457 ENSGT00940000156725 Characoidei ANCESTRAL SPECIES 16 ENSGT00730000111231 ENSGT00610000086173 ENSGT00940000158959.b.a ENSGT00940000164492.a.b ENSGT00940000160620 ENSGT00940000164804.b ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01010000222545 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.o #26 ENSGT00390000007688.a.a #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000165672 #31 ENSGT00940000155561.n ENSGT00950000182975.a.a.a.a.a ENSGT00940000158639 ENSGT00940000156834 ENSGT00940000153391.c.b.b ENSGT00940000159457 ENSGT00940000156725 Red-bellied piranha MODERN SPECIES 82 ddx49 (ENSPNAG00000003429) lsm4 (ENSPNAG00000016598) rab3ab (ENSPNAG00000016566) ENSPNAG00000016529 mpv17l2 (ENSPNAG00000005362) ENSPNAG00000016481 vtg3 (ENSPNAG00000016458) #13 adgrl4 (ENSPNAG00000016373) #14 ADGRL2 (ENSPNAG00000016300) #15 ENSPNAG00000016083 ttll7 (ENSPNAG00000016056) #16 ENSPNAG00000015850 #17 samd13 (ENSPNAG00000015786) #18 uox (ENSPNAG00000015772) #19 DNASE2B (ENSPNAG00000015748) #20 rpf1 (ENSPNAG00000015738) #22 SPATA1 (ENSPNAG00000015691) #23 ctbs (ENSPNAG00000015650) #24 ENSPNAG00000015613 #26 ENSPNAG00000015495 #26 SSX2IP (ENSPNAG00000003072) #27 ENSPNAG00000014242 #28 lpar3 (ENSPNAG00000014167) #29 mcoln2 (ENSPNAG00000014149) #30 ENSPNAG00000014092 #31 wdr47b (ENSPNAG00000014060) camsap2a (ENSPNAG00000013988) ddx59 (ENSPNAG00000002963) kif14 (ENSPNAG00000013834) ENSPNAG00000002953 nr5a2 (ENSPNAG00000013785) Mexicana tetra MODERN SPECIES 20 klhl26 (ENSAMXG00000029834) ddx49 (ENSAMXG00000016919) lsm4 (ENSAMXG00000016932) rab3ab (ENSAMXG00000016945) ENSAMXG00000038929 mpv17l2 (ENSAMXG00000037367) ENSAMXG00000017056 vtg3 (ENSAMXG00000017117) #13 adgrl4 (ENSAMXG00000017191) #14 ADGRL2 (ENSAMXG00000017233) #15 ttll7 (ENSAMXG00000017317) #16 ENSAMXG00000040218 #17 uox (ENSAMXG00000017383) #19 samd13 (ENSAMXG00000042651) #18 DNASE2B (ENSAMXG00000017393) #20 rpf1 (ENSAMXG00000041217) #22 ctbs (ENSAMXG00000017412) #24 ENSAMXG00000036269 #23 ENSAMXG00000017475 #26 ENSAMXG00000017461 #26 ENSAMXG00000038452 #26 SSX2IP (ENSAMXG00000017484) #27 ENSAMXG00000017498 #28 lpar3 (ENSAMXG00000029157) #29 mcoln2 (ENSAMXG00000041878) #30 ENSAMXG00000017529 #31 wdr47b (ENSAMXG00000017531) camsap2a (ENSAMXG00000017540) ddx59 (ENSAMXG00000035102) kif14 (ENSAMXG00000017563) ENSAMXG00000017576 Electric eel MODERN SPECIES 280 CRTC1 (ENSEEEG00000021840) klhl26 (ENSEEEG00000021842) ddx49 (ENSEEEG00000021843) lsm4 (ENSEEEG00000021845) rab3ab (ENSEEEG00000021851) ENSEEEG00000021885 MPV17L2 (ENSEEEG00000021929) vtg3 (ENSEEEG00000021956) #13 adgrl4 (ENSEEEG00000022196) #14 ADGRL2 (ENSEEEG00000022219) #15 ttll7 (ENSEEEG00000022235) #16 ENSEEEG00000022253 #17 samd13 (ENSEEEG00000022643) #18 uox (ENSEEEG00000022644) #19 DNASE2B (ENSEEEG00000022645) #20 rpf1 (ENSEEEG00000022652) #22 ctbs (ENSEEEG00000022671) #24 Channel catfish MODERN SPECIES 1 klhl26 (ENSIPUG00000005435) ddx49 (ENSIPUG00000005386) Lsm4 (ENSIPUG00000005368) Rab3a (ENSIPUG00000005329) pde4c (ENSIPUG00000005158) mpv17l2 (ENSIPUG00000005107) ifi30 (ENSIPUG00000005097) vtg3 (ENSIPUG00000003897) #13 Eltd1 (ENSIPUG00000003708) #14 adgrl2 (ENSIPUG00000003548) #15 ttll7 (ENSIPUG00000003411) #16 prkacb (ENSIPUG00000003317) #17 SAMD13 (ENSIPUG00000003300) #18 uox (ENSIPUG00000003262) #19 DNASE2B (ENSIPUG00000003238) #20 rpf1 (ENSIPUG00000003197) #22 CTBS (ENSIPUG00000003164) #24 ENSIPUG00000003155 #26 ENSIPUG00000003137 pik3ca (ENSIPUG00000003075) zmat3 (ENSIPUG00000003043) kcnmb2 (ENSIPUG00000003023) tbl1xr1 (ENSIPUG00000002968) NAALADL2 (ENSIPUG00000002923) nlgn1 (ENSIPUG00000002896) SPATA16 (ENSIPUG00000002870) ect2 (ENSIPUG00000002773) b3gnt5a (ENSIPUG00000002742) ENSIPUG00000002731 MCF2L2 (ENSIPUG00000002639) ENSIPUG00000002606 Cyprinoidei ANCESTRAL SPECIES 134 ENSGT00940000165051 ENSGT00940000161493 ENSGT00390000007991 ENSGT00530000063749.c.a ENSGT00940000159915.b.i.a ENSGT00940000164804.b ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000168875 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000017402 ENSGT00390000013828.i ENSGT00940000158896 ENSGT00940000165619.b ENSGT01100000263545.a.b.c.a ENSGT00940000165667 ENSGT00950000183154.b.b ENSGT00390000002635 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 386 ENSGT00940000166794.e ENSGT00940000161493.g ENSGT00390000007991 ENSGT00530000063749.c.a.a ENSGT00940000159915.b.i.a.a ENSGT00940000164804.b.l ENSGT00530000064273.a.a.e #13 ENSGT00940000158252.b #14 ENSGT01030000235287.c ENSGT00940000156348.A.a #15 ENSGT00940000159078.e #16 ENSGT00940000168875.b ENSGT00530000063936.b.n #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.ab #22 ENSGT00940000153231.B.bb #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000017402.c ENSGT00390000013828.i.a ENSGT00940000158896.b ENSGT00940000165619.b.c ENSGT00390000002635.e ENSGT00940000165667 ENSGT01100000263545.a.b.c.a.x.a Goldfish MODERN SPECIES 2461 thop1 (ENSCARG00000055326) zgc:113223 (ENSCARG00000055018) reep6 (ENSCARG00000054984) APC2 (ENSCARG00000054971) diras1a (ENSCARG00000054967) ENSCARG00000054951 adgrl4 (ENSCARG00000054924) #14 ENSCARG00000054905 ADGRL2 (ENSCARG00000050906) #15 ENSCARG00000050819 ENSCARG00000050814 ttll7 (ENSCARG00000048345) #16 prkacba (ENSCARG00000047912) samd13 (ENSCARG00000047881) #18 DNASE2B (ENSCARG00000047800) #20 rpf1 (ENSCARG00000047491) #22 agtrap (ENSCARG00000047465) draxina (ENSCARG00000047441) PANK4 (ENSCARG00000046902) rap1ab (ENSCARG00000046857) rpn2 (ENSCARG00000041490) ENSCARG00000041264 ENSCARG00000063856 cdk5rap1 (ENSCARG00000063775) ENSCARG00000063763 ENSCARG00000063758 Cyprininae_a ANCESTRAL SPECIES 161 ENSGT00940000166794.e ENSGT00940000161493.g ENSGT00390000007991 ENSGT00530000063749.c.a.a ENSGT00940000159915.b.i.a.a ENSGT00940000164804.b.l ENSGT00530000064273.a.a.e #13 ENSGT00940000158252.b #14 ENSGT01030000235287.c ENSGT00940000156348.A.a #15 ENSGT00940000159078.e #16 ENSGT00940000168875.b ENSGT00530000063936.b.n #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.ab #22 ENSGT00940000153231.B.bb #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000017402.c ENSGT00390000013828.i.a ENSGT00940000158896.b ENSGT00940000165619.b.c ENSGT00390000002635.e ENSGT00940000165667 Common carp reference MODERN SPECIES 13 thop1 (ENSCCRG00000081203) ENSCCRG00000059765 zgc:113223 (ENSCCRG00000004333) reep6 (ENSCCRG00000055085) ENSCCRG00000066762 ENSCCRG00000056253 diras1a (ENSCCRG00000066953) ENSCCRG00000046720 adgrl4 (ENSCCRG00000047306) #14 ADGRL2 (ENSCCRG00000047336) #15 ENSCCRG00000058031 ttll7 (ENSCCRG00000032807) #16 prkacba (ENSCCRG00000023134) samd13 (ENSCCRG00000023124) #18 ENSCCRG00000022960 RPF1 (ENSCCRG00000081353) #22 agtrap (ENSCCRG00000060390) draxina (ENSCCRG00000039110) ENSCCRG00000048166 rap1ab (ENSCCRG00000048149) ENSCCRG00000047862 ENSCCRG00000049397 ENSCCRG00000049420 ENSCCRG00000065153 ENSCCRG00000055326 ENSCCRG00000057282 ENSCCRG00000075866 ENSCCRG00000066092 ENSCCRG00000058920 ENSCCRG00000052973 ENSCCRG00000072565 Golden-line barbel MODERN SPECIES 724 ttll7 (ENSSGRG00000022314) #16 prkacba (ENSSGRG00000022320) samd13 (ENSSGRG00000022451) #18 uox (ENSSGRG00000022452) #19 DNASE2B (ENSSGRG00000022456) #20 rpf1 (ENSSGRG00000022459) #22 agtrap (ENSSGRG00000022564) agtrap (ENSSGRG00000022568) draxina (ENSSGRG00000022573) ENSSGRG00000022587 rap1ab (ENSSGRG00000023296) rpn2 (ENSSGRG00000023315) ghrh (ENSSGRG00000023739) cdk5rap1 (ENSSGRG00000023740) Cyprininae ANCESTRAL SPECIES 386 ENSGT00940000161493.g ENSGT00390000007991 ENSGT00530000063749.c.a.a ENSGT00940000159915.b.i.a.a ENSGT00940000164804.b.l ENSGT00530000064273.a.a.e #13 ENSGT00940000158252.b #14 ENSGT01030000235287.c ENSGT00940000156348.A.a #15 ENSGT00940000159078.e #16 ENSGT00940000168875.b ENSGT00530000063936.b.n #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.ab #22 ENSGT00940000153231.B.bb #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000017402.c ENSGT00390000013828.i.a ENSGT00940000158896.b ENSGT00940000165619.b.c ENSGT00390000002635.e ENSGT00940000165667 ENSGT01100000263545.a.b.c.a.x.a Goldfish MODERN SPECIES 29 syn2b (ENSCARG00000022229) TIMP4 (ENSCARG00000023678) PPARG (ENSCARG00000023697) tsen2 (ENSCARG00000023895) mkrn2 (ENSCARG00000023910) raf1b (ENSCARG00000023947) cnbpb (ENSCARG00000023990) isy1 (ENSCARG00000024022) zgc:77375 (ENSCARG00000024081) rab43 (ENSCARG00000024098) ENSCARG00000024104 ttll7 (ENSCARG00000024108) #16 prkacba (ENSCARG00000024140) samd13 (ENSCARG00000024207) #18 uox (ENSCARG00000024219) #19 rpf1 (ENSCARG00000024311) #22 SPATA1 (ENSCARG00000024838) #23 ctbs (ENSCARG00000024868) #24 agtrap (ENSCARG00000024891) PANK4 (ENSCARG00000024915) rap1ab (ENSCARG00000025079) ENSCARG00000025134 znf831 (ENSCARG00000025146) ENSCARG00000025162 ENSCARG00000025206 phactr3b (ENSCARG00000025223) acot8 (ENSCARG00000025274) srsf6b (ENSCARG00000025304) mybl2b (ENSCARG00000025331) ENSCARG00000025480 ENSCARG00000025487 Cyprininae_a ANCESTRAL SPECIES 161 ENSGT00940000161493.g ENSGT00390000007991 ENSGT00530000063749.c.a.a ENSGT00940000159915.b.i.a.a ENSGT00940000164804.b.l ENSGT00530000064273.a.a.e #13 ENSGT00940000158252.b #14 ENSGT01030000235287.c ENSGT00940000156348.A.a #15 ENSGT00940000159078.e #16 ENSGT00940000168875.b ENSGT00530000063936.b.n #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.ab #22 ENSGT00940000153231.B.bb #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000017402.c ENSGT00390000013828.i.a ENSGT00940000158896.b ENSGT00940000165619.b.c ENSGT00390000002635.e ENSGT00940000165667 Common carp reference MODERN SPECIES 42 ENSCCRG00000044251 zgc:113223 (ENSCCRG00000044279) reep6 (ENSCCRG00000044287) ENSCCRG00000044293 ENSCCRG00000065365 diras1a (ENSCCRG00000046712) ENSCCRG00000044317 vtg3 (ENSCCRG00000044342) #13 adgrl4 (ENSCCRG00000065300) #14 ADGRL2 (ENSCCRG00000028630) #15 ENSCCRG00000039108 ttll7 (ENSCCRG00000042479) #16 prkacba (ENSCCRG00000002223) samd13 (ENSCCRG00000022558) #18 uox (ENSCCRG00000072036) #19 rpf1 (ENSCCRG00000022608) #22 ENSCCRG00000061275 #23 ctbs (ENSCCRG00000022947) #24 agtrap (ENSCCRG00000063689) draxina (ENSCCRG00000040200) ENSCCRG00000072498 rap1ab (ENSCCRG00000018322) ENSCCRG00000029634 ENSCCRG00000065104 ENSCCRG00000026028 ENSCCRG00000056337 ENSCCRG00000038479 ENSCCRG00000047492 ENSCCRG00000074457 timeless (ENSCCRG00000026703) ENSCCRG00000001990 Golden-line barbel MODERN SPECIES 153 thop1 (ENSSGRG00000050347) ENSSGRG00000050315 reep6 (ENSSGRG00000050313) ENSSGRG00000050312 APC2 (ENSSGRG00000050308) diras1a (ENSSGRG00000050301) ENSSGRG00000050300 vtg3 (ENSSGRG00000050298) #13 adgrl4 (ENSSGRG00000050288) #14 ENSSGRG00000050279 ADGRL2 (ENSSGRG00000050269) #15 ttll7 (ENSSGRG00000050247) #16 prkacba (ENSSGRG00000050152) samd13 (ENSSGRG00000050146) #18 ENSSGRG00000050145 rpf1 (ENSSGRG00000050112) #22 Zebrafish MODERN SPECIES 2 rpusd4 (ENSDARG00000012674) cishb (ENSDARG00000016773) uba3 (ENSDARG00000057987) tmf1 (ENSDARG00000057997) EOGT (ENSDARG00000022853) tafa4b (ENSDARG00000062471) suclg2 (ENSDARG00000044914) kbtbd8 (ENSDARG00000070698) LRIG1 (ENSDARG00000075625) slc25a26 (ENSDARG00000058208) rab7a (ENSDARG00000020497) hmces (ENSDARG00000077471) tada3l (ENSDARG00000058220) arpc4l (ENSDARG00000058225) ENSDARG00000058683 rpf1 (ENSDARG00000005738) #22 SPATA1 (ENSDARG00000094327) #23 ctbs (ENSDARG00000100002) #24 agtrap (ENSDARG00000077082) zgc:173544 (ENSDARG00000070714) draxina (ENSDARG00000058256) PANK4 (ENSDARG00000098453) rap1ab (ENSDARG00000087346) ENSDARG00000112412 gdf11 (ENSDARG00000044924) cdk5rap1 (ENSDARG00000044925) ghrh (ENSDARG00000069481) rpn2 (ENSDARG00000009724) ENSDARG00000104204 elavl1b (ENSDARG00000101744) ENSDARG00000109671 Clupeiformes ANCESTRAL SPECIES 111 ENSGT00730000110872.b.cb #7 ENSGT00950000182928.B.d.b #8 ENSGT00390000000312 #9 ENSGT01030000234559.b #10 ENSGT00730000111078 #11 ENSGT00940000159289 #12 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.A #15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00390000002634.b #20 ENSGT00940000153229.B #19 ENSGT00390000002634.a.f #21 ENSGT00940000153231.B #22 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 Denticle herring MODERN SPECIES 4 ankrd13c (ENSDCDG00000003135) #8 cthl (ENSDCDG00000034987) #9 PTGER3 (ENSDCDG00000034969) #10 zranb2 (ENSDCDG00000034966) #11 negr1 (ENSDCDG00000034960) #12 vtg3 (ENSDCDG00000034550) #13 vtg3 (ENSDCDG00000033876) #13 adgrl4 (ENSDCDG00000033788) #14 ENSDCDG00000033766 ADGRL2 (ENSDCDG00000029791) #15 ttll7 (ENSDCDG00000029661) #16 ENSDCDG00000029207 #17 uox (ENSDCDG00000029202) #19 DNASE2B (ENSDCDG00000029199) #20 ENSDCDG00000029197 #21 rpf1 (ENSDCDG00000029035) #22 ctbs (ENSDCDG00000029026) #24 ENSDCDG00000028867 #26 ENSDCDG00000028847 ENSDCDG00000028551 #26 dcun1d4 (ENSDCDG00000028490) ENSDCDG00000028478 sgcb (ENSDCDG00000028474) spata18 (ENSDCDG00000028463) usp46 (ENSDCDG00000028394) rasl11b (ENSDCDG00000028386) SCFD2 (ENSDCDG00000028385) ENSDCDG00000028384 lnx1 (ENSDCDG00000028381) ENSDCDG00000028377 ENSDCDG00000028376 Osteoglossiformes ANCESTRAL SPECIES 400 ENSGT00940000158252 #14 ENSGT00940000156348.A #15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000163111.a.b #17 ENSGT00530000063936.b.g #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.i #26 P. kingsleyae MODERN SPECIES 177 fam43a (ENSPKIG00000002870) XXYLT1 (ENSPKIG00000002844) ARMC9 (ENSPKIG00000002681) b3gnt7 (ENSPKIG00000002643) ncl (ENSPKIG00000002604) nppc (ENSPKIG00000002587) ENSPKIG00000002559 alpi.1 (ENSPKIG00000002501) ppp1r2 (ENSPKIG00000002482) acap2b (ENSPKIG00000002327) htr2b (ENSPKIG00000002239) psmd1 (ENSPKIG00000002162) ttc14 (ENSPKIG00000002114) fxr1 (ENSPKIG00000002030) sox2 (ENSPKIG00000001950) rpf1 (ENSPKIG00000001892) #22 ctbs (ENSPKIG00000001857) #24 Asian bonytongue MODERN SPECIES 24 ccn1 (ENSSFOG00015032652) DDAH1 (ENSSFOG00015025117) zgc:65873 (ENSSFOG00015025926) SYDE2 (ENSSFOG00015031292) DNAI3 (ENSSFOG00015024577) MCOLN3 (ENSSFOG00015021732) ##30 lpar3 (ENSSFOG00015021723) #29 adgrl4 (ENSSFOG00015021705) #14 ENSSFOG00015021688 ADGRL2 (ENSSFOG00015021664) #15 ttll7 (ENSSFOG00015021593) #16 ENSSFOG00015025219 #17 samd13 (ENSSFOG00015031748) #18 uox (ENSSFOG00015021531) #19 DNASE2B (ENSSFOG00015021519) #20 rpf1 (ENSSFOG00015021492) #22 ctbs (ENSSFOG00015028122) #24 ENSSFOG00015027737 #26 ENSSFOG00015016838 ENSSFOG00015024937 ENSSFOG00015028302 #26 ENSSFOG00015014720 ENSSFOG00015029684 #26 negr1 (ENSSFOG00015014749) #12 zranb2 (ENSSFOG00015014775) #11 PTGER3 (ENSSFOG00015014795) #10 cthl (ENSSFOG00015014815) #9 ankrd13c (ENSSFOG00015014850) #8 srsf11 (ENSSFOG00015027370) #7 lrrc40 (ENSSFOG00015014904) LRRC7 (ENSSFOG00015014990) Spotted gar MODERN SPECIES 648 nrd1b (ENSLOCG00000009851) ENSLOCG00000009886 ENSLOCG00000009890 frem1b (ENSLOCG00000009896) nfia (ENSLOCG00000009919) tm2d1 (ENSLOCG00000009936) PATJ (ENSLOCG00000009943) tal1 (ENSLOCG00000009966) ier5 (ENSLOCG00000017746) stx6 (ENSLOCG00000009973) ENSLOCG00000009981 zranb2 (ENSLOCG00000010010) #11 PTGER3 (ENSLOCG00000010015) #10 cthl (ENSLOCG00000010025) #9 ankrd13c (ENSLOCG00000010043) #8 rpf1 (ENSLOCG00000010053) #22 gng5 (ENSLOCG00000010068) SPATA1 (ENSLOCG00000010073) #23 ctbs (ENSLOCG00000010081) #24 ENSLOCG00000010091 #26 vtg5 (ENSLOCG00000010104) #26 ENSLOCG00000010151 ENSLOCG00000010161 TRABD2B (ENSLOCG00000010171) FOXD2 (ENSLOCG00000017747) foxe3 (ENSLOCG00000017748) cmpk (ENSLOCG00000010183) FAM78B (ENSLOCG00000010200) slc35a3a (ENSLOCG00000010209) notch2 (ENSLOCG00000010216) imp3 (ENSLOCG00000010237) Reedfish MODERN SPECIES 1 pofut1 (ENSECRG00000011101) plagl2 (ENSECRG00000011097) tm9sf4 (ENSECRG00000011076) HCK (ENSECRG00000011059) ENSECRG00000011051 gata5 (ENSECRG00000011030) ADGRL2 (ENSECRG00000010912) ##15 ENSECRG00000010862 ttll7 (ENSECRG00000010855) #16 ASF1A (ENSECRG00000010850) prkacbb (ENSECRG00000010778) #17 samd13 (ENSECRG00000010732) #18 uox (ENSECRG00000010715) #19 DNASE2B (ENSECRG00000010698) #20 ENSECRG00000010687 #21 rpf1 (ENSECRG00000010678) #22 gng5 (ENSECRG00000010670) SPATA1 (ENSECRG00000010664) #23 ctbs (ENSECRG00000010655) #24 ENSECRG00000010620 #26 ENSECRG00000010519 #26 ENSECRG00000010454 #26 ssx2ipa (ENSECRG00000010431) #27 mcoln2 (ENSECRG00000010417) #30 MCOLN3 (ENSECRG00000010401) ##30 DNAI3 (ENSECRG00000010367) SYDE2 (ENSECRG00000010356) zgc:65873 (ENSECRG00000010346) ENSECRG00000010341 DDAH1 (ENSECRG00000010335) ccn1 (ENSECRG00000010325) Sarcopterygii ANCESTRAL SPECIES 17 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163581 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00390000004692.d.b ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT00940000163785.b #28 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000165852 ENSGT00940000157892 ENSGT00940000155151.b Tetrapoda ANCESTRAL SPECIES 8 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000163583 Amniota ANCESTRAL SPECIES 9 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT01100000263525.a.b.b ENSGT00940000153231.B #22 ENSGT00940000165410 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 Mammalia ANCESTRAL SPECIES 5 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT01100000263525.a.b.b ENSGT00940000153231.B #22 ENSGT00940000165410 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 Theria ANCESTRAL SPECIES 3 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT01100000263525.a.b.b ENSGT00940000153231.B #22 ENSGT00940000165410 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 Marsupialia ANCESTRAL SPECIES 3 ENSGT00940000159221 ENSGT00930000151041 ENSGT01050000244808.D.fb.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.A.b.a.a.a.c ENSGT01050000244808.A.b.a.a.a.d ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 Opossum MODERN SPECIES 1 ENSMODG00000029016 FCRLB (ENSMODG00000000945) ENSMODG00000000936 ENSMODG00000000927 ENSMODG00000041797 ENSMODG00000039275 ADGRL4 (ENSMODG00000000912) #14 ENSMODG00000025090 ADGRL2 (ENSMODG00000000713) ##15 ENSMODG00000000609 TTLL7 (ENSMODG00000000596) #16 PRKACB (ENSMODG00000000539) ENSMODG00000048125 ENSMODG00000000498 #19 DNASE2B (ENSMODG00000000513) #20 RPF1 (ENSMODG00000000452) #22 ENSMODG00000048242 SPATA1 (ENSMODG00000041648) #23 CTBS (ENSMODG00000000421) #24 SSX2IP (ENSMODG00000000409) #27 LPAR3 (ENSMODG00000000401) #29 MCOLN2 (ENSMODG00000000390) #30 MCOLN3 (ENSMODG00000000378) ##30 DNAI3 (ENSMODG00000000354) SYDE2 (ENSMODG00000000311) C1orf52 (ENSMODG00000000302) BCL10 (ENSMODG00000037224) DDAH1 (ENSMODG00000000292) CCN1 (ENSMODG00000000285) ENSMODG00000025703 ENSMODG00000048730 Marsupialia_b ANCESTRAL SPECIES 6 ENSGT00940000159221 ENSGT00930000151041 ENSGT01050000244808.D.fb.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.A.b.a.a.a.c ENSGT01050000244808.A.b.a.a.a.d ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 Diprotodontia ANCESTRAL SPECIES 7 ENSGT00940000159221 ENSGT00930000151041 ENSGT01050000244808.D.fb.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.A.b.a.a.a.c.b ENSGT01050000244808.A.b.a.a.a.d ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000162448 Diprotodontia_a ANCESTRAL SPECIES 3 ENSGT00940000159221 ENSGT00930000151041 ENSGT01050000244808.D.fb.a ENSGT01050000244808.A.b.a.a.b ENSGT01050000244808.A.b.a.a.a.c.b ENSGT01050000244808.A.b.a.a.a.d ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.a ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000162448 Common wonbat MODERN SPECIES 1039 ENSVURG00010010678 ENSVURG00010010664 ADGRL4 (ENSVURG00010010627) #14 ENSVURG00010010614 ADGRL2 (ENSVURG00010010458) ##15 ENSVURG00010010433 TTLL7 (ENSVURG00010010284) #16 PRKACB (ENSVURG00010010251) DNASE2B (ENSVURG00010010227) #20 ENSVURG00010010200 #19 RPF1 (ENSVURG00010010163) #22 ENSVURG00010010149 SPATA1 (ENSVURG00010010137) #23 CTBS (ENSVURG00010010118) #24 SSX2IP (ENSVURG00010010062) #27 LPAR3 (ENSVURG00010010046) #29 MCOLN2 (ENSVURG00010009998) #30 MCOLN3 (ENSVURG00010009987) ##30 DNAI3 (ENSVURG00010009880) ENSVURG00010009867 SYDE2 (ENSVURG00010009847) C1orf52 (ENSVURG00010009839) ENSVURG00010009831 DDAH1 (ENSVURG00010009811) CCN1 (ENSVURG00010009801) ENSVURG00010009785 koala MODERN SPECIES 32 ENSPCIG00000016259 ENSPCIG00000012170 ENSPCIG00000012174 ADGRL4 (ENSPCIG00000026590) #14 ENSPCIG00000029745 ENSPCIG00000016330 ENSPCIG00000017625 ADGRL2 (ENSPCIG00000029600) ##15 ENSPCIG00000031116 TTLL7 (ENSPCIG00000006716) #16 PRKACB (ENSPCIG00000013356) SAMD13 (ENSPCIG00000032677) #18 ENSPCIG00000006699 #19 ENSPCIG00000033404 DNASE2B (ENSPCIG00000006696) #20 RPF1 (ENSPCIG00000006692) #22 ENSPCIG00000006687 SPATA1 (ENSPCIG00000006684) #23 CTBS (ENSPCIG00000006682) #24 SSX2IP (ENSPCIG00000006678) #27 LPAR3 (ENSPCIG00000006675) #29 MCOLN2 (ENSPCIG00000006673) #30 MCOLN3 (ENSPCIG00000002891) ##30 DNAI3 (ENSPCIG00000006664) SYDE2 (ENSPCIG00000006661) C1orf52 (ENSPCIG00000006660) BCL10 (ENSPCIG00000006659) DDAH1 (ENSPCIG00000006654) CCN1 (ENSPCIG00000006652) ENSPCIG00000006645 ENSPCIG00000006638 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000003908 ENSSHAG00000025951 ENSSHAG00000024851 ENSSHAG00000007312 ENSSHAG00000015002 ENSSHAG00000014879 #14 ENSSHAG00000029626 ENSSHAG00000026707 ADGRL2 (ENSSHAG00000016576) ##15 TTLL7 (ENSSHAG00000018186) #16 PRKACB (ENSSHAG00000017987) SAMD13 (ENSSHAG00000023065) #18 ENSSHAG00000025421 DNASE2B (ENSSHAG00000017718) #20 ENSSHAG00000017746 #19 RPF1 (ENSSHAG00000017559) #22 ENSSHAG00000024357 SPATA1 (ENSSHAG00000017459) #23 CTBS (ENSSHAG00000017432) #24 ENSSHAG00000017130 #26 SSX2IP (ENSSHAG00000017020) #27 LPAR3 (ENSSHAG00000016258) #29 MCOLN2 (ENSSHAG00000015932) #30 MCOLN3 (ENSSHAG00000015722) ##30 DNAI3 (ENSSHAG00000015341) SYDE2 (ENSSHAG00000014946) ENSSHAG00000028512 BCL10 (ENSSHAG00000024145) DDAH1 (ENSSHAG00000031838) CCN1 (ENSSHAG00000012809) ENSSHAG00000012272 Eutheria ANCESTRAL SPECIES ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT01100000263525.a.b.b ENSGT00940000153231.B #22 ENSGT00940000165410 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000163583 Atlantogenata ANCESTRAL SPECIES 11 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000162448 Afrotheria ANCESTRAL SPECIES 21 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000162448 Afrotheria_a ANCESTRAL SPECIES 20 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000162448 Elephant MODERN SPECIES 145 NEXN (ENSLAFG00000003267) FUBP1 (ENSLAFG00000003273) DNAJB4 (ENSLAFG00000021392) GIPC2 (ENSLAFG00000004720) PTGFR (ENSLAFG00000005183) ##10 IFI44L (ENSLAFG00000018293) IFI44 (ENSLAFG00000015093) ADGRL4 (ENSLAFG00000014692) #14 ENSLAFG00000022545 ADGRL2 (ENSLAFG00000013215) ##15 TTLL7 (ENSLAFG00000022500) #16 PRKACB (ENSLAFG00000006544) ENSLAFG00000031962 ENSLAFG00000026431 #19 DNASE2B (ENSLAFG00000031438) #20 RPF1 (ENSLAFG00000007031) #22 ENSLAFG00000007034 SPATA1 (ENSLAFG00000013256) #23 CTBS (ENSLAFG00000011739) #24 SSX2IP (ENSLAFG00000013496) #27 LPAR3 (ENSLAFG00000010892) #29 MCOLN2 (ENSLAFG00000029928) #30 MCOLN3 (ENSLAFG00000016018) ##30 DNAI3 (ENSLAFG00000016022) SYDE2 (ENSLAFG00000016031) C1orf52 (ENSLAFG00000007499) BCL10 (ENSLAFG00000003648) DDAH1 (ENSLAFG00000010363) CCN1 (ENSLAFG00000022979) ZNHIT6 (ENSLAFG00000032483) ENSLAFG00000012889 Hyrax MODERN SPECIES 1436 RPF1 (ENSPCAG00000015666) #22 ENSPCAG00000015735 Tenrec MODERN SPECIES 1780 ENSETEG00000002755 #22 Xenarthra ANCESTRAL SPECIES 823 ENSGT01100000263525.a.b.b ENSGT00940000153231.B #22 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 Armadillo DUPLICATION Armadillo MODERN SPECIES 354 ENSDNOG00000018429 ENSDNOG00000044952 ENSDNOG00000007486 MMP26 (ENSDNOG00000010839) ENSDNOG00000004140 #22 ENSDNOG00000049782 OR51G2 (ENSDNOG00000043792) OR51A7 (ENSDNOG00000016898) OR51T1 (ENSDNOG00000042770) ENSDNOG00000017126 OR51S1 (ENSDNOG00000025585) OR51F2 (ENSDNOG00000038293) OR52R1 (ENSDNOG00000010198) Armadillo MODERN SPECIES 1734 ENSDNOG00000047526 #22 ENSDNOG00000000770 CTBS (ENSDNOG00000018619) #24 SSX2IP (ENSDNOG00000014975) #27 LPAR3 (ENSDNOG00000037346) #29 Sloth DUPLICATION Sloth MODERN SPECIES 7905 ENSCHOG00000011775 #22 Sloth DUPLICATION Sloth MODERN SPECIES 10250 ENSCHOG00000003320 #22 CFAP161 (ENSCHOG00000003328) Sloth MODERN SPECIES 10623 ENSCHOG00000011236 #22 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00990000205119 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Carnivora ANCESTRAL SPECIES 1 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00990000205119 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Felidae ANCESTRAL SPECIES 10 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00990000205119 ENSGT00530000063936.b.c #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Cat MODERN SPECIES 239 DNAJB4 (ENSFCAG00000026143) GIPC2 (ENSFCAG00000033966) PTGFR (ENSFCAG00000004947) ##10 IFI44L (ENSFCAG00000013210) IFI44 (ENSFCAG00000022349) ADGRL4 (ENSFCAG00000031487) #14 ADGRL2 (ENSFCAG00000025759) ##15 ENSFCAG00000033151 TTLL7 (ENSFCAG00000012519) #16 PRKACB (ENSFCAG00000027890) ENSFCAG00000049478 SAMD13 (ENSFCAG00000045569) #18 ENSFCAG00000050042 UOX (ENSFCAG00000024210) #19 DNASE2B (ENSFCAG00000008789) #20 RPF1 (ENSFCAG00000025546) #22 GNG5 (ENSFCAG00000038836) SPATA1 (ENSFCAG00000022598) #23 CTBS (ENSFCAG00000046319) #24 SSX2IP (ENSFCAG00000023838) #27 LPAR3 (ENSFCAG00000008799) #29 MCOLN2 (ENSFCAG00000011193) #30 MCOLN3 (ENSFCAG00000011196) ##30 DNAI3 (ENSFCAG00000011197) SYDE2 (ENSFCAG00000027468) CC1H1orf52 (ENSFCAG00000035401) BCL10 (ENSFCAG00000036364) DDAH1 (ENSFCAG00000029407) CCN1 (ENSFCAG00000031965) ZNHIT6 (ENSFCAG00000027469) COL24A1 (ENSFCAG00000033986) Panthera ANCESTRAL SPECIES 4 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00990000205119 ENSGT00530000063936.b.c #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Panthera_a ANCESTRAL SPECIES 11 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000158947.f ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00990000205119 ENSGT00530000063936.b.c #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 lion MODERN SPECIES 8 DNAJB4 (ENSPLOG00000006942) GIPC2 (ENSPLOG00000006907) PTGFR (ENSPLOG00000006889) ##10 IFI44L (ENSPLOG00000006859) IFI44 (ENSPLOG00000006832) ADGRL4 (ENSPLOG00000006736) #14 ADGRL2 (ENSPLOG00000006440) ##15 ENSPLOG00000006337 TTLL7 (ENSPLOG00000006225) #16 PRKACB (ENSPLOG00000006004) ENSPLOG00000005852 ENSPLOG00000005835 SAMD13 (ENSPLOG00000005808) #18 ENSPLOG00000005767 #19 DNASE2B (ENSPLOG00000005726) #20 RPF1 (ENSPLOG00000005694) #22 GNG5 (ENSPLOG00000005675) SPATA1 (ENSPLOG00000005659) #23 CTBS (ENSPLOG00000005615) #24 SSX2IP (ENSPLOG00000005570) #27 LPAR3 (ENSPLOG00000010887) #29 MCOLN2 (ENSPLOG00000010836) #30 MCOLN3 (ENSPLOG00000010724) ##30 ENSPLOG00000010679 DNAI3 (ENSPLOG00000010446) SYDE2 (ENSPLOG00000010350) C1orf52 (ENSPLOG00000010306) BCL10 (ENSPLOG00000010271) DDAH1 (ENSPLOG00000010185) ENSPLOG00000010159 CCN1 (ENSPLOG00000010073) leopard MODERN SPECIES 62 GIPC2 (ENSPPRG00000022599) PTGFR (ENSPPRG00000011472) ##10 IFI44 (ENSPPRG00000011096) ADGRL4 (ENSPPRG00000010360) #14 ENSPPRG00000021997 ENSPPRG00000009975 ADGRL2 (ENSPPRG00000009129) ##15 ENSPPRG00000024293 TTLL7 (ENSPPRG00000024394) #16 PRKACB (ENSPPRG00000015792) ENSPPRG00000021431 ENSPPRG00000010565 #18 ENSPPRG00000010285 ENSPPRG00000010218 #19 ENSPPRG00000009883 #20 RPF1 (ENSPPRG00000009777) #22 GNG5 (ENSPPRG00000009563) SPATA1 (ENSPPRG00000009258) #23 CTBS (ENSPPRG00000008795) #24 ENSPPRG00000008708 SSX2IP (ENSPPRG00000008492) #27 LPAR3 (ENSPPRG00000006969) #29 MCOLN2 (ENSPPRG00000006914) #30 MCOLN3 (ENSPPRG00000006193) ##30 DNAI3 (ENSPPRG00000004873) SYDE2 (ENSPPRG00000002218) C1orf52 (ENSPPRG00000001522) BCL10 (ENSPPRG00000000878) DDAH1 (ENSPPRG00000000442) ENSPPRG00000021077 CCN1 (ENSPPRG00000023322) Tiger MODERN SPECIES 126 FUBP1 (ENSPTIG00000019450) DNAJB4 (ENSPTIG00000019319) GIPC2 (ENSPTIG00000018974) PTGFR (ENSPTIG00000018492) ##10 ENSPTIG00000018442 IFI44 (ENSPTIG00000018123) ADGRL4 (ENSPTIG00000017117) #14 ENSPTIG00000016970 ADGRL2 (ENSPTIG00000009283) ##15 TTLL7 (ENSPTIG00000007891) #16 PRKACB (ENSPTIG00000020230) ENSPTIG00000019784 SAMD13 (ENSPTIG00000019707) #18 ENSPTIG00000019546 #19 DNASE2B (ENSPTIG00000019401) #20 RPF1 (ENSPTIG00000019164) #22 GNG5 (ENSPTIG00000019098) SPATA1 (ENSPTIG00000019012) #23 CTBS (ENSPTIG00000018263) #24 SSX2IP (ENSPTIG00000017936) #27 LPAR3 (ENSPTIG00000017836) #29 MCOLN2 (ENSPTIG00000017601) #30 MCOLN3 (ENSPTIG00000016693) ##30 DNAI3 (ENSPTIG00000016214) SYDE2 (ENSPTIG00000015910) C1orf52 (ENSPTIG00000015690) BCL10 (ENSPTIG00000015138) DDAH1 (ENSPTIG00000014695) ENSPTIG00000010331 CCN1 (ENSPTIG00000014498) ZNHIT6 (ENSPTIG00000014171) Caniformia ANCESTRAL SPECIES 2 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00990000205119 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Caniformia_b ANCESTRAL SPECIES 1 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Ursidae ANCESTRAL SPECIES ENSGT00730000111176 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00700000104637 ENSGT00730000111592 ENSGT00940000163019 ENSGT00940000163248 ENSGT00940000164168 ENSGT00440000039991 ENSGT00950000183301 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00730000111580 ENSGT00940000163905 ENSGT00940000162465 ENSGT00940000154467.b.b.b ENSGT00940000170498 Ursus ANCESTRAL SPECIES 18 ENSGT00730000111176 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00950000185586 ENSGT00940000163248 ENSGT00940000164168 ENSGT00440000039991 ENSGT00730000111554 ENSGT00940000161842.b ENSGT00940000162465 ENSGT00940000154467.b.b.b ENSGT00940000154467.b.a ENSGT00940000154467.a.i ENSGT00940000162966 ENSGT00940000154172.g.b ENSGT00940000154197.b.b.y.b.b ENSGT00940000160047 American black bear MODERN SPECIES 4667 ENSUAMG00000001371 DNASE2B (ENSUAMG00000001379) #20 RPF1 (ENSUAMG00000001406) #22 ENSUAMG00000001415 SPATA1 (ENSUAMG00000001423) #23 CTBS (ENSUAMG00000001457) #24 Polar bear MODERN SPECIES 170 DNAJB4 (ENSUMAG00000006009) GIPC2 (ENSUMAG00000005998) PTGFR (ENSUMAG00000005971) ##10 IFI44L (ENSUMAG00000005961) IFI44 (ENSUMAG00000005948) ADGRL4 (ENSUMAG00000005936) #14 ENSUMAG00000005927 ADGRL2 (ENSUMAG00000003188) ##15 TTLL7 (ENSUMAG00000002708) #16 PRKACB (ENSUMAG00000002686) ENSUMAG00000002683 ENSUMAG00000002678 SAMD13 (ENSUMAG00000002672) #18 ENSUMAG00000002660 #19 DNASE2B (ENSUMAG00000002646) #20 RPF1 (ENSUMAG00000002636) #22 ENSUMAG00000002631 SPATA1 (ENSUMAG00000002623) #23 CTBS (ENSUMAG00000002608) #24 SSX2IP (ENSUMAG00000002601) #27 LPAR3 (ENSUMAG00000002579) #29 MCOLN2 (ENSUMAG00000002572) #30 MCOLN3 (ENSUMAG00000002560) ##30 DNAI3 (ENSUMAG00000002541) SYDE2 (ENSUMAG00000002509) C1orf52 (ENSUMAG00000002504) BCL10 (ENSUMAG00000002502) DDAH1 (ENSUMAG00000002499) CCN1 (ENSUMAG00000002488) ZNHIT6 (ENSUMAG00000002478) ENSUMAG00000002474 Giant Panda MODERN SPECIES 11 ENSAMEG00000007372 DNAJB4 (ENSAMEG00000007441) GIPC2 (ENSAMEG00000007448) ENSAMEG00000028883 PTGFR (ENSAMEG00000026789) ##10 IFI44L (ENSAMEG00000018246) IFI44 (ENSAMEG00000018244) ADGRL4 (ENSAMEG00000018239) #14 ADGRL2 (ENSAMEG00000006030) ##15 TTLL7 (ENSAMEG00000014783) #16 PRKACB (ENSAMEG00000013506) SAMD13 (ENSAMEG00000026469) #18 ENSAMEG00000031257 ENSAMEG00000013543 #19 DNASE2B (ENSAMEG00000013581) #20 RPF1 (ENSAMEG00000008531) #22 ENSAMEG00000029878 SPATA1 (ENSAMEG00000000388) #23 CTBS (ENSAMEG00000000372) #24 SSX2IP (ENSAMEG00000006467) #27 MCOLN2 (ENSAMEG00000017295) #30 MCOLN3 (ENSAMEG00000017280) ##30 DNAI3 (ENSAMEG00000017265) SYDE2 (ENSAMEG00000017261) C1orf52 (ENSAMEG00000023530) BCL10 (ENSAMEG00000026623) DDAH1 (ENSAMEG00000017246) ENSAMEG00000023476 CCN1 (ENSAMEG00000017235) ZNHIT6 (ENSAMEG00000017224) COL24A1 (ENSAMEG00000017218) Mustelinae ANCESTRAL SPECIES 60 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00990000205119 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 American mink MODERN SPECIES 141 TTLL7 (ENSNVIG00000008940) #16 PRKACB (ENSNVIG00000009008) ENSNVIG00000009210 SAMD13 (ENSNVIG00000009219) #18 ENSNVIG00000009235 ENSNVIG00000009242 ENSNVIG00000009249 #19 DNASE2B (ENSNVIG00000009276) #20 RPF1 (ENSNVIG00000009290) #22 ENSNVIG00000009308 SPATA1 (ENSNVIG00000009323) #23 CTBS (ENSNVIG00000009351) #24 SSX2IP (ENSNVIG00000009366) #27 LPAR3 (ENSNVIG00000009396) #29 MCOLN2 (ENSNVIG00000009411) #30 MCOLN3 (ENSNVIG00000009481) ##30 DNAI3 (ENSNVIG00000009565) SYDE2 (ENSNVIG00000009581) C1orf52 (ENSNVIG00000009606) BCL10 (ENSNVIG00000009612) DDAH1 (ENSNVIG00000009631) ENSNVIG00000009665 CCN1 (ENSNVIG00000009667) ZNHIT6 (ENSNVIG00000009678) Ferret DUPLICATION Ferret MODERN SPECIES 180 ENSMPUG00000017556 UBE2V1 (ENSMPUG00000017557) SNAI1 (ENSMPUG00000017558) RNF114 (ENSMPUG00000017559) SPATA2 (ENSMPUG00000017560) ENSMPUG00000019022 SLC9A8 (ENSMPUG00000017561) B4GALT5 (ENSMPUG00000017567) PTGIS (ENSMPUG00000017568) KCNB1 (ENSMPUG00000017569) ENSMPUG00000017570 ZNFX1 (ENSMPUG00000017571) DDX27 (ENSMPUG00000017572) STAU1 (ENSMPUG00000017581) CSE1L (ENSMPUG00000017586) ENSMPUG00000017587 #22 ENSMPUG00000017588 ARFGEF2 (ENSMPUG00000017589) ENSMPUG00000017590 PREX1 (ENSMPUG00000017591) SULF2 (ENSMPUG00000017592) NCOA3 (ENSMPUG00000017593) ZMYND8 (ENSMPUG00000017594) EYA2 (ENSMPUG00000017595) SLC2A10 (ENSMPUG00000017596) SLC13A3 (ENSMPUG00000017597) ENSMPUG00000017598 ENSMPUG00000017599 ENSMPUG00000017600 ELMO2 (ENSMPUG00000017601) SLC35C2 (ENSMPUG00000017602) Ferret MODERN SPECIES 197 TTLL7 (ENSMPUG00000005774) #16 PRKACB (ENSMPUG00000005765) SAMD13 (ENSMPUG00000005761) #18 ENSMPUG00000005757 ENSMPUG00000005748 #19 DNASE2B (ENSMPUG00000005741) #20 ENSMPUG00000005736 #22 ENSMPUG00000005730 SPATA1 (ENSMPUG00000005701) #23 CTBS (ENSMPUG00000005696) #24 SSX2IP (ENSMPUG00000005687) #27 LPAR3 (ENSMPUG00000005683) #29 MCOLN3 (ENSMPUG00000005571) ##30 DNAI3 (ENSMPUG00000005544) SYDE2 (ENSMPUG00000005531) ENSMPUG00000005524 BCL10 (ENSMPUG00000005447) DDAH1 (ENSMPUG00000005441) CCN1 (ENSMPUG00000005430) ZNHIT6 (ENSMPUG00000005352) COL24A1 (ENSMPUG00000005229) ODF2L (ENSMPUG00000005220) Canidae ANCESTRAL SPECIES 18 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00990000205119 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804.a ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Red fox DUPLICATION Red fox DUPLICATION Red fox MODERN SPECIES 25 ENSVVUG00000015631 NEDD4L (ENSVVUG00000015651) ALPK2 (ENSVVUG00000015696) MALT1 (ENSVVUG00000015734) ZNF532 (ENSVVUG00000015898) ENSVVUG00000015926 SEC11C (ENSVVUG00000015956) ENSVVUG00000015959 CPLX4 (ENSVVUG00000015964) LMAN1 (ENSVVUG00000015966) CCBE1 (ENSVVUG00000015972) ENSVVUG00000015989 ENSVVUG00000015990 MC4R (ENSVVUG00000016008) ENSVVUG00000016096 ENSVVUG00000017435 #22 ENSVVUG00000017462 CDH20 (ENSVVUG00000017469) RNF152 (ENSVVUG00000017495) ENSVVUG00000017497 PIGN (ENSVVUG00000017523) RELCH (ENSVVUG00000017586) TNFRSF11A (ENSVVUG00000017610) ZCCHC2 (ENSVVUG00000017624) PHLPP1 (ENSVVUG00000017653) BCL2 (ENSVVUG00000017738) KDSR (ENSVVUG00000017746) VPS4B (ENSVVUG00000017769) SERPINB5 (ENSVVUG00000017771) SERPINB12 (ENSVVUG00000017775) SERPINB13 (ENSVVUG00000017788) Red fox MODERN SPECIES 11 ENSVVUG00000023434 SCARB2 (ENSVVUG00000023440) NUP54 (ENSVVUG00000023444) ENSVVUG00000023448 ART3 (ENSVVUG00000023461) CXCL10 (ENSVVUG00000023469) ENSVVUG00000023471 CXCL9 (ENSVVUG00000023474) ENSVVUG00000023531 NAAA (ENSVVUG00000024151) PPEF2 (ENSVVUG00000024157) USO1 (ENSVVUG00000024163) G3BP2 (ENSVVUG00000024171) CDKL2 (ENSVVUG00000024175) ENSVVUG00000024181 ENSVVUG00000024183 #22 ENSVVUG00000024186 THAP6 (ENSVVUG00000024190) RCHY1 (ENSVVUG00000024193) Red fox MODERN SPECIES 50 PTGFR (ENSVVUG00000030021) ##10 IFI44L (ENSVVUG00000030022) IFI44 (ENSVVUG00000030023) ADGRL4 (ENSVVUG00000030026) #14 ENSVVUG00000030036 ADGRL2 (ENSVVUG00000030043) ##15 ENSVVUG00000030049 ENSVVUG00000030058 TTLL7 (ENSVVUG00000030065) #16 PRKACB (ENSVVUG00000030067) ENSVVUG00000030069 SAMD13 (ENSVVUG00000030070) #18 ENSVVUG00000030071 ENSVVUG00000030072 #19 DNASE2B (ENSVVUG00000030073) #20 ENSVVUG00000030076 #22 SPATA1 (ENSVVUG00000030078) #23 CTBS (ENSVVUG00000030082) #24 SSX2IP (ENSVVUG00000030083) #27 LPAR3 (ENSVVUG00000030085) #29 MCOLN2 (ENSVVUG00000030088) #30 MCOLN3 (ENSVVUG00000030089) ##30 WDR63 (ENSVVUG00000030090) SYDE2 (ENSVVUG00000030093) C1orf52 (ENSVVUG00000030094) BCL10 (ENSVVUG00000030096) DDAH1 (ENSVVUG00000030097) ENSVVUG00000030098 CYR61 (ENSVVUG00000030100) ZNHIT6 (ENSVVUG00000030102) ENSVVUG00000030103 Canis_lupus ANCESTRAL SPECIES 2 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000154191.i.a.l.b.a ENSGT01020000232227 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00990000205119 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804.a ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Dingo DUPLICATION Dingo MODERN SPECIES 172 ADGRL4 (ENSCAFG00020015088) #14 ENSCAFG00020015060 ENSCAFG00020015047 ENSCAFG00020015044 ENSCAFG00020015032 ENSCAFG00020015022 ADGRL2 (ENSCAFG00020014423) ##15 TTLL7 (ENSCAFG00020014357) #16 PRKACB (ENSCAFG00020014330) ENSCAFG00020014324 ENSCAFG00020014321 SAMD13 (ENSCAFG00020014319) #18 ENSCAFG00020014317 ENSCAFG00020014308 #19 DNASE2B (ENSCAFG00020014302) #20 ENSCAFG00020014296 #22 GNG5 (ENSCAFG00020014293) SPATA1 (ENSCAFG00020014283) #23 CTBS (ENSCAFG00020014264) #24 SSX2IP (ENSCAFG00020014235) #27 ENSCAFG00020014228 LPAR3 (ENSCAFG00020014218) #29 MCOLN2 (ENSCAFG00020014195) #30 MCOLN3 (ENSCAFG00020014182) ##30 DNAI3 (ENSCAFG00020014165) SYDE2 (ENSCAFG00020014128) C1orf52 (ENSCAFG00020014126) BCL10 (ENSCAFG00020014121) DDAH1 (ENSCAFG00020014115) ENSCAFG00020014109 CCN1 (ENSCAFG00020014107) Dingo MODERN SPECIES 342 ENSCAFG00020011546 CCDC158 (ENSCAFG00020011548) STBD1 (ENSCAFG00020011558) SCARB2 (ENSCAFG00020011560) NUP54 (ENSCAFG00020011564) ART3 (ENSCAFG00020011569) ENSCAFG00020011570 CXCL10 (ENSCAFG00020011575) SDAD1 (ENSCAFG00020011582) ENSCAFG00020011610 PPEF2 (ENSCAFG00020011617) USO1 (ENSCAFG00020011626) G3BP2 (ENSCAFG00020011645) CDKL2 (ENSCAFG00020011668) ENSCAFG00020011679 ENSCAFG00020011681 #22 ENSCAFG00020011683 THAP6 (ENSCAFG00020011684) ENSCAFG00020011687 Dog DUPLICATION Dog MODERN SPECIES 34 GIPC2 (ENSCAFG00845003104) PTGFR (ENSCAFG00845003039) ##10 ENSCAFG00845003006 ADGRL4 (ENSCAFG00845002794) #14 ENSCAFG00845002693 ENSCAFG00845002681 ENSCAFG00845002670 ENSCAFG00845002648 ADGRL2 (ENSCAFG00845002417) ##15 TTLL7 (ENSCAFG00845002099) #16 PRKACB (ENSCAFG00845001925) ENSCAFG00845001788 #18 ENSCAFG00845001765 DNASE2B (ENSCAFG00845001747) #20 UOX (ENSCAFG00845001685) #19 RPF1 (ENSCAFG00845001641) #22 GNG5 (ENSCAFG00845001608) #24 ENSCAFG00845001531 #23 SSX2IP (ENSCAFG00845001479) #27 ENSCAFG00845001445 LPAR3 (ENSCAFG00845001428) #29 MCOLN2 (ENSCAFG00845001382) #30 MCOLN3 (ENSCAFG00845001310) ##30 WDR63 (ENSCAFG00845001218) SYDE2 (ENSCAFG00845001161) C6H1orf52 (ENSCAFG00845001130) BCL10 (ENSCAFG00845001105) DDAH1 (ENSCAFG00845001064) ENSCAFG00845001033 ENSCAFG00845024791 CCN1 (ENSCAFG00845024708) Dog MODERN SPECIES 25 ENSCAFG00845014745 CCDC158 (ENSCAFG00845030219) STBD1 (ENSCAFG00845030147) ENSCAFG00845030118 SCARB2 (ENSCAFG00845029992) NUP54 (ENSCAFG00845029928) CXCL11 (ENSCAFG00845029883) CXCL10 (ENSCAFG00845029862) ART3 (ENSCAFG00845029743) ENSCAFG00845029614 ENSCAFG00845029566 PPEF2 (ENSCAFG00845029176) USO1 (ENSCAFG00845028789) G3BP2 (ENSCAFG00845028548) CDKL2 (ENSCAFG00845028424) ENSCAFG00845028372 #22 ENSCAFG00845028346 ENSCAFG00845028277 RCHY1 (ENSCAFG00845028101) Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Equus ANCESTRAL SPECIES 3 ENSGT00730000111176 ENSGT00940000156051 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Donkey MODERN SPECIES 7 DNAJB4 (ENSEASG00005016984) ENSEASG00005016983 GIPC2 (ENSEASG00005016977) PTGFR (ENSEASG00005016973) ##10 IFI44L (ENSEASG00005016968) IFI44 (ENSEASG00005029542) ADGRL4 (ENSEASG00005016959) #14 ENSEASG00005016951 ENSEASG00005016942 ADGRL2 (ENSEASG00005014270) ##15 TTLL7 (ENSEASG00005014170) #16 PRKACB (ENSEASG00005014168) ENSEASG00005024895 DNASE2B (ENSEASG00005014162) #20 ENSEASG00005014161 #19 RPF1 (ENSEASG00005014158) #22 ENSEASG00005033635 SPATA1 (ENSEASG00005014155) #23 CTBS (ENSEASG00005014138) #24 SSX2IP (ENSEASG00005014134) #27 LPAR3 (ENSEASG00005014129) #29 MCOLN2 (ENSEASG00005014110) #30 MCOLN3 (ENSEASG00005014101) ##30 DNAI3 (ENSEASG00005014094) SYDE2 (ENSEASG00005023929) C1orf52 (ENSEASG00005014090) BCL10 (ENSEASG00005014089) DDAH1 (ENSEASG00005014087) ENSEASG00005034815 CCN1 (ENSEASG00005014085) ZNHIT6 (ENSEASG00005014084) Horse MODERN SPECIES 26 ENSECAG00000038617 GIPC2 (ENSECAG00000010627) PTGFR (ENSECAG00000010558) ##10 IFI44L (ENSECAG00000009618) IFI44 (ENSECAG00000009020) ADGRL4 (ENSECAG00000005896) #14 ENSECAG00000038387 ADGRL2 (ENSECAG00000024824) ##15 ENSECAG00000058679 ENSECAG00000057322 TTLL7 (ENSECAG00000024674) #16 PRKACB (ENSECAG00000022585) ENSECAG00000028442 DNASE2B (ENSECAG00000020335) #20 UOX (ENSECAG00000021582) #19 RPF1 (ENSECAG00000019661) #22 GNG5 (ENSECAG00000048494) SPATA1 (ENSECAG00000016351) #23 CTBS (ENSECAG00000015643) #24 ENSECAG00000056260 ENSECAG00000048925 SSX2IP (ENSECAG00000012872) #27 LPAR3 (ENSECAG00000049816) #29 MCOLN2 (ENSECAG00000011008) #30 MCOLN3 (ENSECAG00000007249) ##30 DNAI3 (ENSECAG00000000764) SYDE2 (ENSECAG00000025133) C5H1orf52 (ENSECAG00000025029) BCL10 (ENSECAG00000025005) DDAH1 (ENSECAG00000024997) CCN1 (ENSECAG00000024993) Chiroptera ANCESTRAL SPECIES ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000162448 Megabat MODERN SPECIES 827 DNASE2B (ENSPVAG00000003727) #20 RPF1 (ENSPVAG00000003729) #22 GNG5 (ENSPVAG00000003731) SPATA1 (ENSPVAG00000003732) #23 Microchiroptera ANCESTRAL SPECIES 1 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000162448 Microbat MODERN SPECIES 962 FUBP1 (ENSMLUG00000014802) DNAJB4 (ENSMLUG00000023787) GIPC2 (ENSMLUG00000008628) PTGFR (ENSMLUG00000008646) ##10 IFI44L (ENSMLUG00000008652) IFI44 (ENSMLUG00000025243) ADGRL4 (ENSMLUG00000004153) #14 ENSMLUG00000026696 ADGRL2 (ENSMLUG00000014302) ##15 ENSMLUG00000028126 TTLL7 (ENSMLUG00000009405) #16 PRKACB (ENSMLUG00000003326) ENSMLUG00000026964 ENSMLUG00000025448 #19 DNASE2B (ENSMLUG00000016019) #20 RPF1 (ENSMLUG00000016028) #22 ENSMLUG00000016038 CTBS (ENSMLUG00000016039) #24 SSX2IP (ENSMLUG00000015867) #27 LPAR3 (ENSMLUG00000012725) #29 MCOLN2 (ENSMLUG00000013082) #30 MCOLN3 (ENSMLUG00000003333) ##30 DNAI3 (ENSMLUG00000010769) SYDE2 (ENSMLUG00000010817) BCL10 (ENSMLUG00000016961) DDAH1 (ENSMLUG00000015884) Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 27 DNAJB4 (ENSRFEG00010006739) GIPC2 (ENSRFEG00010006773) PTGFR (ENSRFEG00010006813) ##10 IFI44L (ENSRFEG00010006850) IFI44 (ENSRFEG00010006933) ADGRL4 (ENSRFEG00010006999) #14 ENSRFEG00010007097 ADGRL2 (ENSRFEG00010007177) ##15 TTLL7 (ENSRFEG00010007466) #16 PRKACB (ENSRFEG00010007567) SAMD13 (ENSRFEG00010008128) #18 ENSRFEG00010008163 ENSRFEG00010008199 ENSRFEG00010008224 #19 DNASE2B (ENSRFEG00010008256) #20 ENSRFEG00010008327 #22 GNG5 (ENSRFEG00010008455) SPATA1 (ENSRFEG00010008499) #23 ENSRFEG00010008537 #24 ENSRFEG00010008577 #24 SSX2IP (ENSRFEG00010008650) #27 LPAR3 (ENSRFEG00010008696) #29 MCOLN2 (ENSRFEG00010008712) #30 MCOLN3 (ENSRFEG00010008879) ##30 DNAI3 (ENSRFEG00010009062) SYDE2 (ENSRFEG00010009428) ENSRFEG00010009469 BCL10 (ENSRFEG00010009517) DDAH1 (ENSRFEG00010009596) CCN1 (ENSRFEG00010009708) ZNHIT6 (ENSRFEG00010009748) Greater horseshoe bat MODERN SPECIES 9 ENSRFEG00010010613 ENSRFEG00010010596 ENSRFEG00010010515 ENSRFEG00010010491 ENSRFEG00010010433 ENSRFEG00010010385 ZNF669 (ENSRFEG00010010329) ENSRFEG00010010295 ENSRFEG00010009966 ENSRFEG00010009937 ENSRFEG00010009718 OR2Z1 (ENSRFEG00010009691) ENSRFEG00010009651 ENSRFEG00010009565 SPOCK3 (ENSRFEG00010009354) ENSRFEG00010009334 #22 ANXA10 (ENSRFEG00010009234) DDX60 (ENSRFEG00010007842) PALLD (ENSRFEG00010006988) CBR4 (ENSRFEG00010006884) SH3RF1 (ENSRFEG00010006828) NEK1 (ENSRFEG00010006499) CLCN3 (ENSRFEG00010006286) HPF1 (ENSRFEG00010006209) MFAP3L (ENSRFEG00010006163) AADAT (ENSRFEG00010006065) GALNTL6 (ENSRFEG00010005964) GALNT7 (ENSRFEG00010005905) ENSRFEG00010005858 SCRG1 (ENSRFEG00010005843) SAP30 (ENSRFEG00010005802) Artiodactyla ANCESTRAL SPECIES ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Suina ANCESTRAL SPECIES 27 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00960000187407 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00940000155173.h ENSGT00940000154660.b.d.a ENSGT00950000183211.a.b ENSGT00530000063631.a ENSGT00390000011362 ENSGT00940000162740 ENSGT00390000010779.a.a ENSGT00550000076117 ENSGT00390000002381.a Pig MODERN SPECIES 14 IFI44L (ENSSSCG00000027660) IFI44 (ENSSSCG00000003763) ADGRL4 (ENSSSCG00000003762) #14 ENSSSCG00000043601 ENSSSCG00000027421 ENSSSCG00000051159 ADGRL2 (ENSSSCG00000003761) ##15 ENSSSCG00000046184 TTLL7 (ENSSSCG00000003760) #16 ENSSSCG00000051341 PRKACB (ENSSSCG00000040920) ENSSSCG00000044862 SAMD13 (ENSSSCG00000026005) #18 UOX (ENSSSCG00000022206) #19 DNASE2B (ENSSSCG00000026532) #20 RPF1 (ENSSSCG00000022145) #22 GNG5 (ENSSSCG00000053185) SPATA1 (ENSSSCG00000029882) #23 CTBS (ENSSSCG00000003758) #24 ENSSSCG00000044786 SSX2IP (ENSSSCG00000003757) #27 LPAR3 (ENSSSCG00000003756) #29 MCOLN2 (ENSSSCG00000003755) #30 ENSSSCG00000003754 ENSSSCG00000003753 ENSSSCG00000060282 PARD6G (ENSSSCG00000023376) ADNP2 (ENSSSCG00000038632) ENSSSCG00000038475 TXNL4A (ENSSSCG00000005777) HSBP1L1 (ENSSSCG00000005778) Chacoan peccary MODERN SPECIES 53 DNAJB4 (ENSCWAG00000004682) ENSCWAG00000004662 GIPC2 (ENSCWAG00000004625) PTGFR (ENSCWAG00000004602) ##10 ENSCWAG00000004545 ADGRL4 (ENSCWAG00000004302) #14 ENSCWAG00000004248 ADGRL2 (ENSCWAG00000004043) ##15 TTLL7 (ENSCWAG00000003942) #16 PRKACB (ENSCWAG00000002664) ENSCWAG00000002559 SAMD13 (ENSCWAG00000002546) #18 ENSCWAG00000002540 ENSCWAG00000002530 #19 DNASE2B (ENSCWAG00000002516) #20 RPF1 (ENSCWAG00000002495) #22 ENSCWAG00000002479 SPATA1 (ENSCWAG00000002456) #23 CTBS (ENSCWAG00000002441) #24 SSX2IP (ENSCWAG00000002428) #27 LPAR3 (ENSCWAG00000002414) #29 MCOLN2 (ENSCWAG00000002383) #30 ENSCWAG00000001060 ENSCWAG00000000879 ENSCWAG00000000868 ADNP2 (ENSCWAG00000000856) RBFA (ENSCWAG00000000838) ENSCWAG00000000812 TXNL4A (ENSCWAG00000000771) ENSCWAG00000000741 SLC66A2 (ENSCWAG00000000639) Artiodactyla_a ANCESTRAL SPECIES ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00990000205119 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Camelidae ANCESTRAL SPECIES 11 ENSGT00940000162419 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT01100000263525.a.b.b.d ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 Arabian camel MODERN SPECIES 4 GIPC2 (ENSCDRG00005014503) PTGFR (ENSCDRG00005014602) ##10 IFI44L (ENSCDRG00005014623) IFI44 (ENSCDRG00005014665) ADGRL4 (ENSCDRG00005014755) #14 ADGRL2 (ENSCDRG00005015074) ##15 ENSCDRG00005015601 ENSCDRG00005006665 TTLL7 (ENSCDRG00005006729) #16 PRKACB (ENSCDRG00005007007) ENSCDRG00005010452 SAMD13 (ENSCDRG00005010489) #18 ENSCDRG00005010571 ENSCDRG00005010589 #19 DNASE2B (ENSCDRG00005010674) #20 RPF1 (ENSCDRG00005010749) #22 GNG5 (ENSCDRG00005010830) SPATA1 (ENSCDRG00005010904) #23 CTBS (ENSCDRG00005011010) #24 SSX2IP (ENSCDRG00005011054) #27 LPAR3 (ENSCDRG00005011117) #29 MCOLN2 (ENSCDRG00005011158) #30 MCOLN3 (ENSCDRG00005011428) ##30 DNAI3 (ENSCDRG00005011768) SYDE2 (ENSCDRG00005011826) C1orf52 (ENSCDRG00005011873) BCL10 (ENSCDRG00005011941) DDAH1 (ENSCDRG00005011995) CCN1 (ENSCDRG00005012224) ZNHIT6 (ENSCDRG00005012303) COL24A1 (ENSCDRG00005012526) Alpaca MODERN SPECIES 2753 ENSVPAG00000005879 #18 ENSVPAG00000005881 #20 RPF1 (ENSVPAG00000005882) #22 ENSVPAG00000005883 ENSVPAG00000005884 #23 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Pecora ANCESTRAL SPECIES 2 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00390000015470.m.a ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT01000000215412 ENSGT00940000155151.b ENSGT00390000017201 Yarkand deer MODERN SPECIES 12 IFI44 (ENSCHYG00000025770) ENSCHYG00000025754 ADGRL4 (ENSCHYG00000025660) #14 ENSCHYG00000025603 ENSCHYG00000025564 ENSCHYG00000025554 ADGRL2 (ENSCHYG00000025187) ##15 ENSCHYG00000025138 ENSCHYG00000025127 TTLL7 (ENSCHYG00000024854) #16 ENSCHYG00000024821 PRKACB (ENSCHYG00000022683) ENSCHYG00000022387 ENSCHYG00000022258 #19 DNASE2B (ENSCHYG00000022151) #20 RPF1 (ENSCHYG00000022044) #22 ENSCHYG00000022011 SPATA1 (ENSCHYG00000021860) #23 CTBS (ENSCHYG00000021813) #24 ENSCHYG00000021637 #27 LPAR3 (ENSCHYG00000021602) #29 MCOLN2 (ENSCHYG00000021424) #30 MCOLN3 (ENSCHYG00000021236) ##30 DNAI3 (ENSCHYG00000019958) SYDE2 (ENSCHYG00000019844) C1orf52 (ENSCHYG00000019772) BCL10 (ENSCHYG00000019711) DDAH1 (ENSCHYG00000019587) ENSCHYG00000019567 ENSCHYG00000019543 CCN1 (ENSCHYG00000019490) Percora_a ANCESTRAL SPECIES 1 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00390000015470.m.a ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT01000000215412 ENSGT00940000155151.b ENSGT00390000017201 Bovidae ANCESTRAL SPECIES 1 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00390000015470.m.a ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT01000000215412 ENSGT00940000155151.b ENSGT00390000017201 Caprinae ANCESTRAL SPECIES 2 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00390000004574.f ENSGT00390000015470.m.a ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT01000000215412 ENSGT00940000155151.b ENSGT00390000017201 Rambouillet Sheep MODERN SPECIES GIPC2 (ENSOARG00020019604) ENSOARG00020019668 PTGFR (ENSOARG00020019699) ##10 IFI44 (ENSOARG00020019816) ADGRL4 (ENSOARG00020019870) #14 ENSOARG00020020128 ENSOARG00020020181 ENSOARG00020020212 ADGRL2 (ENSOARG00020020283) ##15 TTLL7 (ENSOARG00020000192) #16 PRKACB (ENSOARG00020000399) SAMD13 (ENSOARG00020001103) #18 ENSOARG00020001115 ENSOARG00020001133 #19 DNASE2B (ENSOARG00020001163) #20 RPF1 (ENSOARG00020001191) #22 GNG5 (ENSOARG00020001205) SPATA1 (ENSOARG00020001225) #23 CTBS (ENSOARG00020001255) #24 SSX2IP (ENSOARG00020001297) #27 LPAR3 (ENSOARG00020001315) #29 MCOLN2 (ENSOARG00020001324) #30 MCOLN3 (ENSOARG00020001362) ##30 ENSOARG00020001462 DNAI3 (ENSOARG00020001533) SYDE2 (ENSOARG00020001859) C1orf52 (ENSOARG00020001875) BCL10 (ENSOARG00020001886) ENSOARG00020001899 DDAH1 (ENSOARG00020001916) CCN1 (ENSOARG00020001971) Goat DUPLICATION Goat MODERN SPECIES 27 SCARA5 (ENSCHIG00000002743) ENSCHIG00000003841 ENSCHIG00000008066 ENSCHIG00000021742 ESCO2 (ENSCHIG00000012950) CCDC25 (ENSCHIG00000005126) SCARA3 (ENSCHIG00000025164) ENSCHIG00000010216 TMEM215 (ENSCHIG00000008408) NDUFB6 (ENSCHIG00000027260) TOPORS (ENSCHIG00000012805) RIGI (ENSCHIG00000025883) ACO1 (ENSCHIG00000007667) ENSCHIG00000020484 ENSCHIG00000024316 ENSCHIG00000006618 #22 LINGO2 (ENSCHIG00000013346) C9orf72 (ENSCHIG00000014755) MOB3B (ENSCHIG00000011582) IFNK (ENSCHIG00000016395) EQTN (ENSCHIG00000008768) TEK (ENSCHIG00000013962) IFT74 (ENSCHIG00000009508) LRRC19 (ENSCHIG00000024759) PLAA (ENSCHIG00000014920) CAAP1 (ENSCHIG00000017091) ENSCHIG00000026276 TUSC1 (ENSCHIG00000012670) ENSCHIG00000003269 IZUMO3 (ENSCHIG00000018315) ENSCHIG00000006162 Goat MODERN SPECIES 28 STXBP5 (ENSCHIG00000010001) ADGB (ENSCHIG00000025488) RAB32 (ENSCHIG00000014393) GRM1 (ENSCHIG00000025318) SHPRH (ENSCHIG00000008669) FBXO30 (ENSCHIG00000024740) EPM2A (ENSCHIG00000023043) ENSCHIG00000014200 UTRN (ENSCHIG00000003954) STX11 (ENSCHIG00000007036) ENSCHIG00000003556 SF3B5 (ENSCHIG00000007987) PLAGL1 (ENSCHIG00000000894) ZC2HC1B (ENSCHIG00000015766) LTV1 (ENSCHIG00000013788) ENSCHIG00000023074 #22 PHACTR2 (ENSCHIG00000014021) FUCA2 (ENSCHIG00000020144) PEX3 (ENSCHIG00000026379) ADAT2 (ENSCHIG00000006501) AIG1 (ENSCHIG00000012210) ENSCHIG00000022469 HIVEP2 (ENSCHIG00000013280) ADGRG6 (ENSCHIG00000022578) ENSCHIG00000022022 GJE1 (ENSCHIG00000022503) NMBR (ENSCHIG00000022616) ENSCHIG00000012475 TXLNB (ENSCHIG00000026800) HECA (ENSCHIG00000022876) ABRACL (ENSCHIG00000019314) Goat MODERN SPECIES 22 ENSCHIG00000013418 DNAJB4 (ENSCHIG00000015815) GIPC2 (ENSCHIG00000023418) PTGFR (ENSCHIG00000012516) ##10 IFI44L (ENSCHIG00000018536) IFI44 (ENSCHIG00000012676) ADGRL4 (ENSCHIG00000020032) #14 ENSCHIG00000011439 ENSCHIG00000001046 ADGRL2 (ENSCHIG00000018750) ##15 TTLL7 (ENSCHIG00000017102) #16 PRKACB (ENSCHIG00000024391) ENSCHIG00000014514 ENSCHIG00000025541 #19 DNASE2B (ENSCHIG00000018531) #20 ENSCHIG00000012566 #22 GNG5 (ENSCHIG00000016183) SPATA1 (ENSCHIG00000004028) #23 CTBS (ENSCHIG00000022826) #24 SSX2IP (ENSCHIG00000025764) #27 LPAR3 (ENSCHIG00000017316) #29 MCOLN2 (ENSCHIG00000008729) #30 MCOLN3 (ENSCHIG00000018773) ##30 DNAI3 (ENSCHIG00000017079) SYDE2 (ENSCHIG00000014781) ENSCHIG00000026751 BCL10 (ENSCHIG00000011561) DDAH1 (ENSCHIG00000024596) ENSCHIG00000011990 CCN1 (ENSCHIG00000027269) ZNHIT6 (ENSCHIG00000020100) Bovinae ANCESTRAL SPECIES 1 ENSGT00390000016972.a.b.a.a ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00390000015470.m.a ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT01000000215412 ENSGT00940000155151.b ENSGT00390000017201 American bison MODERN SPECIES 3325 ENSBBBG00000006557 TTLL7 (ENSBBBG00000024844) #16 ENSBBBG00000024734 PRKACB (ENSBBBG00000024703) ENSBBBG00000024455 SAMD13 (ENSBBBG00000024450) #18 ENSBBBG00000006366 #19 DNASE2B (ENSBBBG00000006341) #20 RPF1 (ENSBBBG00000008889) #22 ENSBBBG00000024302 SPATA1 (ENSBBBG00000024290) #23 CTBS (ENSBBBG00000024262) #24 SSX2IP (ENSBBBG00000008990) #27 LPAR3 (ENSBBBG00000024176) #29 MCOLN2 (ENSBBBG00000024164) #30 MCOLN3 (ENSBBBG00000024117) ##30 DNAI3 (ENSBBBG00000024063) SYDE2 (ENSBBBG00000008975) C1orf52 (ENSBBBG00000023979) BCL10 (ENSBBBG00000023973) DDAH1 (ENSBBBG00000023962) ENSBBBG00000023925 CCN1 (ENSBBBG00000023910) ZNHIT6 (ENSBBBG00000006216) Bos ANCESTRAL SPECIES ENSGT00390000016972.a.b.a.a ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00390000015470.m.a ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT01000000215412 ENSGT00940000155151.b ENSGT00390000017201 Bos_a ANCESTRAL SPECIES 1 ENSGT00950000185225 ENSGT00390000003420.a.b.w ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT01030000235809 ENSGT00390000015470.m.a ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT01000000215412 ENSGT00940000155151.b ENSGT00390000017201 Domestic yak MODERN SPECIES 22 ENSBGRG00000002150 ADGRL4 (ENSBGRG00000002075) #14 ENSBGRG00000002057 ENSBGRG00000002049 ENSBGRG00000002036 ENSBGRG00000002001 ADGRL2 (ENSBGRG00000001750) ##15 ENSBGRG00000001675 ENSBGRG00000001672 TTLL7 (ENSBGRG00000001582) #16 ENSBGRG00000001547 PRKACB (ENSBGRG00000001167) ENSBGRG00000001096 #18 DNASE2B (ENSBGRG00000001063) #20 ENSBGRG00000001021 #19 RPF1 (ENSBGRG00000000983) #22 ENSBGRG00000000963 SPATA1 (ENSBGRG00000000917) #23 CTBS (ENSBGRG00000000887) #24 SSX2IP (ENSBGRG00000000833) #27 LPAR3 (ENSBGRG00000000803) #29 ENSBGRG00000000797 MCOLN2 (ENSBGRG00000000755) #30 MCOLN3 (ENSBGRG00000000709) ##30 DNAI3 (ENSBGRG00000000494) SYDE2 (ENSBGRG00000000456) C1orf52 (ENSBGRG00000000411) BCL10 (ENSBGRG00000000384) DDAH1 (ENSBGRG00000000347) ENSBGRG00000000337 CCN1 (ENSBGRG00000000313) Wild yak MODERN SPECIES 82 TTLL7 (ENSBMUG00000024231) #16 PRKACB (ENSBMUG00000024149) ENSBMUG00000024098 #18 ENSBMUG00000024081 #19 DNASE2B (ENSBMUG00000024075) #20 RPF1 (ENSBMUG00000024055) #22 ENSBMUG00000024040 SPATA1 (ENSBMUG00000024028) #23 CTBS (ENSBMUG00000024014) #24 SSX2IP (ENSBMUG00000024007) #27 Bos_b ANCESTRAL SPECIES 1 ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00390000010045.k.a.a.a.b ENSGT01030000235809 ENSGT00390000015470.m.a ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT01000000215412 ENSGT00940000155151.b ENSGT00390000017201 Cow MODERN SPECIES 22 IFI44 (ENSBTAG00000034349) ADGRL4 (ENSBTAG00000019733) #14 ENSBTAG00000005007 ENSBTAG00000011537 ENSBTAG00000052602 ENSBTAG00000053907 ADGRL2 (ENSBTAG00000012305) ##15 ENSBTAG00000050554 TTLL7 (ENSBTAG00000003322) #16 PRKACB (ENSBTAG00000011953) SAMD13 (ENSBTAG00000007724) SAMD13 (ENSBTAG00000053482) #18 ENSBTAG00000053100 DNASE2B (ENSBTAG00000010445) #20 UOX (ENSBTAG00000024255) #19 RPF1 (ENSBTAG00000008118) #22 GNG5 (ENSBTAG00000008122) SPATA1 (ENSBTAG00000020010) #23 CTBS (ENSBTAG00000005782) #24 SSX2IP (ENSBTAG00000018942) #27 LPAR3 (ENSBTAG00000003791) #29 MCOLN2 (ENSBTAG00000046773) #30 MCOLN3 (ENSBTAG00000016982) ##30 DNAI3 (ENSBTAG00000013778) SYDE2 (ENSBTAG00000003444) C3H1orf52 (ENSBTAG00000016326) BCL10 (ENSBTAG00000013851) DDAH1 (ENSBTAG00000034776) CCN1 (ENSBTAG00000009844) ZNHIT6 (ENSBTAG00000021051) ENSBTAG00000048312 Hybrid Bos Indicus MODERN SPECIES 22 PTGFR (ENSBIXG00005027104) ##10 IFI44L (ENSBIXG00005027151) IFI44 (ENSBIXG00005027171) ADGRL4 (ENSBIXG00005004685) #14 ENSBIXG00005027245 ENSBIXG00005027264 ENSBIXG00005027296 ADGRL2 (ENSBIXG00005027720) ##15 ENSBIXG00005027837 ENSBIXG00005027881 TTLL7 (ENSBIXG00005028032) #16 PRKACB (ENSBIXG00005006542) ENSBIXG00005028288 #18 DNASE2B (ENSBIXG00005004867) #20 ENSBIXG00005028353 #19 RPF1 (ENSBIXG00005028403) #22 ENSBIXG00005004893 ENSBIXG00005028437 SPATA1 (ENSBIXG00005028480) #23 CTBS (ENSBIXG00005028483) #24 SSX2IP (ENSBIXG00005028521) #27 LPAR3 (ENSBIXG00005028548) #29 MCOLN2 (ENSBIXG00005028583) #30 MCOLN3 (ENSBIXG00005028662) ##30 ENSBIXG00005028687 DNAI3 (ENSBIXG00005028759) SYDE2 (ENSBIXG00005028777) C1orf52 (ENSBIXG00005006646) BCL10 (ENSBIXG00005028824) DDAH1 (ENSBIXG00005002285) ENSBIXG00005002260 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 339 ENSMMSG00000010641 PTGFR (ENSMMSG00000010621) ##10 ENSMMSG00000010598 ADGRL4 (ENSMMSG00000010416) #14 ENSMMSG00000010359 ENSMMSG00000010349 ADGRL2 (ENSMMSG00000010108) ##15 ENSMMSG00000009992 ENSMMSG00000009973 TTLL7 (ENSMMSG00000009936) #16 PRKACB (ENSMMSG00000007994) SAMD13 (ENSMMSG00000007874) #18 ENSMMSG00000007862 ENSMMSG00000007774 #19 DNASE2B (ENSMMSG00000007733) #20 ENSMMSG00000007703 #22 ENSMMSG00000007684 ENSMMSG00000007667 #23 CTBS (ENSMMSG00000007643) #24 SSX2IP (ENSMMSG00000007576) #27 LPAR3 (ENSMMSG00000007558) #29 MCOLN2 (ENSMMSG00000007452) #30 MCOLN3 (ENSMMSG00000007252) ##30 DNAI3 (ENSMMSG00000007042) SYDE2 (ENSMMSG00000006993) C1orf52 (ENSMMSG00000006971) BCL10 (ENSMMSG00000006944) DDAH1 (ENSMMSG00000006918) ENSMMSG00000006904 CCN1 (ENSMMSG00000006870) ZNHIT6 (ENSMMSG00000006731) Siberian musk deer MODERN SPECIES 101 SLC12A2 (ENSMMSG00000003838) CCDC192 (ENSMMSG00000003883) CTXN3 (ENSMMSG00000003894) ENSMMSG00000003899 ENSMMSG00000003901 PRRC1 (ENSMMSG00000003907) MEGF10 (ENSMMSG00000003923) C5orf63 (ENSMMSG00000003981) MARCHF3 (ENSMMSG00000003994) ENSMMSG00000004009 TEX43 (ENSMMSG00000004028) ENSMMSG00000004037 ALDH7A1 (ENSMMSG00000004048) #37 GRAMD2B (ENSMMSG00000004112) ZNF608 (ENSMMSG00000014318) ENSMMSG00000014341 #22 CSNK1G3 (ENSMMSG00000014374) CEP120 (ENSMMSG00000014464) PRDM6 (ENSMMSG00000014526) PPIC (ENSMMSG00000014546) SNX24 (ENSMMSG00000014587) ENSMMSG00000014598 Cetacea ANCESTRAL SPECIES ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00950000186157 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Blue whale MODERN SPECIES GIPC2 (ENSBMSG00010009222) PTGFR (ENSBMSG00010009240) ##10 IFI44L (ENSBMSG00010009272) IFI44 (ENSBMSG00010009332) ENSBMSG00010009347 ADGRL4 (ENSBMSG00010009365) #14 ENSBMSG00010009418 ADGRL2 (ENSBMSG00010009448) ##15 ENSBMSG00010009486 TTLL7 (ENSBMSG00010009501) #16 PRKACB (ENSBMSG00010009636) SAMD13 (ENSBMSG00010010774) #18 ENSBMSG00010010794 ENSBMSG00010010810 #19 ENSBMSG00010010830 #20 RPF1 (ENSBMSG00010010838) #22 ENSBMSG00010010850 SPATA1 (ENSBMSG00010010864) #23 ENSBMSG00010010877 SSX2IP (ENSBMSG00010010888) #27 LPAR3 (ENSBMSG00010010913) #29 ENSBMSG00010010924 MCOLN2 (ENSBMSG00010010954) #30 MCOLN3 (ENSBMSG00010011002) ##30 DNAI3 (ENSBMSG00010011066) SYDE2 (ENSBMSG00010011151) C1orf52 (ENSBMSG00010011167) ENSBMSG00010011187 DDAH1 (ENSBMSG00010011208) ENSBMSG00010011239 CCN1 (ENSBMSG00010011251) Odontoceti ANCESTRAL SPECIES ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00950000186157 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Sperm whale MODERN SPECIES 15 DNAJB4 (ENSPCTG00005016294) GIPC2 (ENSPCTG00005016253) PTGFR (ENSPCTG00005016188) ##10 ENSPCTG00005016139 ENSPCTG00005016057 IFI44 (ENSPCTG00005015945) ADGRL4 (ENSPCTG00005015730) #14 ENSPCTG00005015664 ENSPCTG00005015639 ADGRL2 (ENSPCTG00005015373) ##15 TTLL7 (ENSPCTG00005015200) #16 PRKACB (ENSPCTG00005012881) SAMD13 (ENSPCTG00005012711) #18 ENSPCTG00005012636 #19 ENSPCTG00005012591 #20 RPF1 (ENSPCTG00005012513) #22 GNG5 (ENSPCTG00005012478) ENSPCTG00005012437 #23 ENSPCTG00005012400 ENSPCTG00005012379 SSX2IP (ENSPCTG00005012325) #27 LPAR3 (ENSPCTG00005012306) #29 MCOLN2 (ENSPCTG00005012138) #30 MCOLN3 (ENSPCTG00005011843) ##30 DNAI3 (ENSPCTG00005011337) SYDE2 (ENSPCTG00005011255) C4H1orf52 (ENSPCTG00005011208) BCL10 (ENSPCTG00005010972) CCN1 (ENSPCTG00005010887) ZNHIT6 (ENSPCTG00005010735) ENSPCTG00005010695 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000010089.e.a ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000162448 Dolphin MODERN SPECIES 6731 RPF1 (ENSTTRG00000000789) #22 GNG5 (ENSTTRG00000000787) Odontoceti_b ANCESTRAL SPECIES ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000162448 ENSGT01100000263605.b.a Vaquita MODERN SPECIES FUBP1 (ENSPSNG00000002468) DNAJB4 (ENSPSNG00000002510) ENSPSNG00000002535 GIPC2 (ENSPSNG00000002545) PTGFR (ENSPSNG00000002568) ##10 ENSPSNG00000002591 ADGRL4 (ENSPSNG00000002636) #14 ENSPSNG00000002741 ADGRL2 (ENSPSNG00000002844) ##15 ENSPSNG00000002961 TTLL7 (ENSPSNG00000003000) #16 PRKACB (ENSPSNG00000003284) SAMD13 (ENSPSNG00000003722) #18 ENSPSNG00000003738 #19 ENSPSNG00000003753 #20 RPF1 (ENSPSNG00000003772) #22 GNG5 (ENSPSNG00000003794) SSX2IP (ENSPSNG00000003809) #27 LPAR3 (ENSPSNG00000003830) #29 MCOLN2 (ENSPSNG00000003843) #30 MCOLN3 (ENSPSNG00000003890) ##30 DNAI3 (ENSPSNG00000003943) SYDE2 (ENSPSNG00000003962) C1orf52 (ENSPSNG00000003984) BCL10 (ENSPSNG00000004004) DDAH1 (ENSPSNG00000004030) CCN1 (ENSPSNG00000009783) ZNHIT6 (ENSPSNG00000009894) COL24A1 (ENSPSNG00000010075) ENSPSNG00000010645 ENSPSNG00000010684 Monodontidae ANCESTRAL SPECIES ENSGT00390000008565.b.b ENSGT00730000111176 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT00910000145621 ENSGT00390000010089.e.a ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000162448 Narwhal MODERN SPECIES 304 ENSMMNG00015008069 DNAJB4 (ENSMMNG00015007989) ENSMMNG00015007980 GIPC2 (ENSMMNG00015007950) PTGFR (ENSMMNG00015007927) ##10 ENSMMNG00015007918 ADGRL4 (ENSMMNG00015007843) #14 ADGRL2 (ENSMMNG00015007756) ##15 ENSMMNG00015007678 TTLL7 (ENSMMNG00015007554) #16 PRKACB (ENSMMNG00015007361) ENSMMNG00015007272 SAMD13 (ENSMMNG00015007257) #18 ENSMMNG00015007239 #19 DNASE2B (ENSMMNG00015007213) #20 RPF1 (ENSMMNG00015007188) #22 ENSMMNG00015007171 ENSMMNG00015007123 SSX2IP (ENSMMNG00015007092) #27 LPAR3 (ENSMMNG00015007073) #29 MCOLN2 (ENSMMNG00015007034) #30 MCOLN3 (ENSMMNG00015006977) ##30 DNAI3 (ENSMMNG00015006897) SYDE2 (ENSMMNG00015006844) C1orf52 (ENSMMNG00015006824) BCL10 (ENSMMNG00015006803) DDAH1 (ENSMMNG00015006769) ENSMMNG00015006746 ENSMMNG00015006737 CCN1 (ENSMMNG00015006718) ZNHIT6 (ENSMMNG00015006688) Beluga whale MODERN SPECIES 74 FUBP1 (ENSDLEG00000021599) DNAJB4 (ENSDLEG00000021609) ENSDLEG00000021611 GIPC2 (ENSDLEG00000021613) PTGFR (ENSDLEG00000016018) ##10 ENSDLEG00000016026 ENSDLEG00000016033 ADGRL4 (ENSDLEG00000016037) #14 ADGRL2 (ENSDLEG00000016098) ##15 ENSDLEG00000016193 TTLL7 (ENSDLEG00000016218) #16 PRKACB (ENSDLEG00000016303) SAMD13 (ENSDLEG00000016382) #18 ENSDLEG00000016414 #19 DNASE2B (ENSDLEG00000016427) #20 RPF1 (ENSDLEG00000016438) #22 ENSDLEG00000016469 ENSDLEG00000016476 SSX2IP (ENSDLEG00000016495) #27 LPAR3 (ENSDLEG00000016529) #29 MCOLN2 (ENSDLEG00000016543) #30 MCOLN3 (ENSDLEG00000016634) ##30 DNAI3 (ENSDLEG00000016672) SYDE2 (ENSDLEG00000016765) CUNH1orf52 (ENSDLEG00000016784) BCL10 (ENSDLEG00000016793) DDAH1 (ENSDLEG00000016798) CYR61 (ENSDLEG00000016833) ZNHIT6 (ENSDLEG00000016847) ENSDLEG00000016857 ENSDLEG00000016875 Eulipotyphla ANCESTRAL SPECIES 372 ENSGT00530000063936.b #18 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b.d Hedgehog DUPLICATION Hedgehog MODERN SPECIES 1880 ENSEEUG00000001097 #22 ENSEEUG00000001105 Hedgehog MODERN SPECIES 12532 ENSEEUG00000014950 #22 Common shrew MODERN SPECIES 6684 SAMD13 (ENSSARG00000011374) #18 DNASE2B (ENSSARG00000011377) #20 RPF1 (ENSSARG00000011380) #22 Euarchontoglires DUPLICATION Euarchontoglires DUPLICATION Euarchontoglires DUPLICATION Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153231.B.v.a.a #22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000153231.B.v.a.a #22 Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew MODERN SPECIES 10091 ENSTBEG00000016624 #22 Tree shrew MODERN SPECIES 6493 ENSTBEG00000012128 #22 ENSTBEG00000012455 #22 ENSTBEG00000012664 #22 Tree shrew MODERN SPECIES 9612 ENSTBEG00000009578 #22 Tree shrew MODERN SPECIES 9384 ENSTBEG00000001587 #22 Tree shrew MODERN SPECIES 9153 ENSTBEG00000006669 #22 Tree shrew MODERN SPECIES 6382 ENSTBEG00000001224 #22 Tree shrew MODERN SPECIES 5598 NFATC3 (ENSTBEG00000010495) ENSTBEG00000010766 #22 ESRP2 (ENSTBEG00000010883) PLA2G15 (ENSTBEG00000011515) Tree shrew MODERN SPECIES 9773 ENSTBEG00000015252 #22 Tree shrew MODERN SPECIES 9154 ENSTBEG00000000334 #22 Tree shrew MODERN SPECIES 10188 ENSTBEG00000002184 #22 Tree shrew MODERN SPECIES 9786 ENSTBEG00000002036 #22 Tree shrew MODERN SPECIES 6272 ENSTBEG00000002870 #22 Tree shrew MODERN SPECIES 6493 ENSTBEG00000012128 #22 ENSTBEG00000012455 #22 ENSTBEG00000012664 #22 Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew MODERN SPECIES 9583 ENSTBEG00000006898 #22 Tree shrew MODERN SPECIES 9788 ENSTBEG00000014370 #22 Tree shrew MODERN SPECIES 7552 ENSTBEG00000004594 #22 ENSTBEG00000004509 #22 Tree shrew MODERN SPECIES 9534 ENSTBEG00000006713 #22 Tree shrew MODERN SPECIES 6240 ENSTBEG00000003033 #22 Tree shrew MODERN SPECIES 9346 ENSTBEG00000006948 #22 Tree shrew MODERN SPECIES 9388 ENSTBEG00000015180 #22 Tree shrew MODERN SPECIES 9582 ENSTBEG00000006218 #22 Tree shrew MODERN SPECIES 6653 ENSTBEG00000008089 #22 Tree shrew MODERN SPECIES 9581 ENSTBEG00000016806 #22 Tree shrew MODERN SPECIES 6907 ENSTBEG00000010671 #22 Tree shrew MODERN SPECIES 8071 ENSTBEG00000017071 #22 ENSTBEG00000017049 #22 Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew MODERN SPECIES 6493 ENSTBEG00000012128 #22 ENSTBEG00000012455 #22 ENSTBEG00000012664 #22 Tree shrew MODERN SPECIES 7552 ENSTBEG00000004594 #22 ENSTBEG00000004509 #22 Tree shrew DUPLICATION Tree shrew MODERN SPECIES 8071 ENSTBEG00000017071 #22 ENSTBEG00000017049 #22 Tree shrew MODERN SPECIES 9608 ENSTBEG00000006952 #22 Tree shrew MODERN SPECIES 10535 ENSTBEG00000000840 #22 Tree shrew MODERN SPECIES 10303 ENSTBEG00000009181 #22 Tree shrew MODERN SPECIES 9438 ENSTBEG00000001988 #22 Tree shrew MODERN SPECIES 10549 ENSTBEG00000013368 #22 Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew MODERN SPECIES 9979 ENSTBEG00000013438 #22 Tree shrew MODERN SPECIES 9796 ENSTBEG00000012203 #22 Tree shrew MODERN SPECIES 6206 ENSTBEG00000014636 #22 Tree shrew MODERN SPECIES 10268 ENSTBEG00000013882 #22 Tree shrew MODERN SPECIES 9891 ENSTBEG00000002725 #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153231.B.v.a.b #22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000153231.B.v.a.b #22 Tree shrew MODERN SPECIES 9323 ENSTBEG00000009132 #22 Primates ANCESTRAL SPECIES ENSGT00940000153231.B.v.a.b #22 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000153231.B.v.a.b #22 Lemuriformes ANCESTRAL SPECIES ENSGT00940000153231.B.v.a.b #22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00940000153231.B.v.a.b #22 Coquerels sifaka MODERN SPECIES 569 ENSPCOG00000020091 ENSPCOG00000019451 #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00940000153231.B.v.b #22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00940000153231.B.v.b #22 Tree shrew MODERN SPECIES 6639 ENSTBEG00000006259 #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Primates ANCESTRAL SPECIES 4 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.a ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Bushbaby MODERN SPECIES 125 ZZZ3 (ENSOGAG00000014210) USP33 (ENSOGAG00000014214) MIGA1 (ENSOGAG00000014221) NEXN (ENSOGAG00000014228) FUBP1 (ENSOGAG00000014233) DNAJB4 (ENSOGAG00000014243) GIPC2 (ENSOGAG00000007256) PTGFR (ENSOGAG00000007261) ##10 ADGRL4 (ENSOGAG00000006134) #14 ADGRL2 (ENSOGAG00000009602) ##15 TTLL7 (ENSOGAG00000005832) #16 PRKACB (ENSOGAG00000005838) SAMD13 (ENSOGAG00000005845) #18 ENSOGAG00000028035 #19 DNASE2B (ENSOGAG00000005849) #20 RPF1 (ENSOGAG00000004642) #22 GNG5 (ENSOGAG00000004645) SPATA1 (ENSOGAG00000004646) #23 CTBS (ENSOGAG00000004649) #24 SSX2IP (ENSOGAG00000004650) #27 LPAR3 (ENSOGAG00000016851) #29 MCOLN2 (ENSOGAG00000007718) #30 MCOLN3 (ENSOGAG00000007722) ##30 DNAI3 (ENSOGAG00000007725) SYDE2 (ENSOGAG00000008376) C1orf52 (ENSOGAG00000008908) BCL10 (ENSOGAG00000009976) DDAH1 (ENSOGAG00000009978) ENSOGAG00000033406 CCN1 (ENSOGAG00000010959) ZNHIT6 (ENSOGAG00000010963) Lemuriformes ANCESTRAL SPECIES ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.a ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Lemuriformes_a ANCESTRAL SPECIES 39 ENSGT00940000160043 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.a ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Greater bamboo lemur MODERN SPECIES 537 TTLL7 (ENSPSMG00000022404) #16 PRKACB (ENSPSMG00000022311) ENSPSMG00000022233 ENSPSMG00000022228 SAMD13 (ENSPSMG00000022221) #18 ENSPSMG00000022213 #19 DNASE2B (ENSPSMG00000022211) #20 RPF1 (ENSPSMG00000022204) #22 ENSPSMG00000022188 SPATA1 (ENSPSMG00000022182) #23 CTBS (ENSPSMG00000022172) #24 SSX2IP (ENSPSMG00000022107) #27 LPAR3 (ENSPSMG00000022047) #29 MCOLN2 (ENSPSMG00000022039) #30 MCOLN3 (ENSPSMG00000022026) ##30 DNAI3 (ENSPSMG00000021999) SYDE2 (ENSPSMG00000021951) C1orf52 (ENSPSMG00000021942) BCL10 (ENSPSMG00000021929) DDAH1 (ENSPSMG00000021897) ENSPSMG00000021882 CCN1 (ENSPSMG00000021878) ENSPSMG00000021872 Coquerels sifaka MODERN SPECIES 846 USP33 (ENSPCOG00000026094) MIGA1 (ENSPCOG00000028257) NEXN (ENSPCOG00000017864) FUBP1 (ENSPCOG00000024974) DNAJB4 (ENSPCOG00000017453) GIPC2 (ENSPCOG00000023278) PTGFR (ENSPCOG00000027733) ##10 ADGRL4 (ENSPCOG00000022457) #14 ENSPCOG00000024442 ADGRL2 (ENSPCOG00000022804) ##15 TTLL7 (ENSPCOG00000017715) #16 PRKACB (ENSPCOG00000014437) SAMD13 (ENSPCOG00000028743) #18 ENSPCOG00000014070 DNASE2B (ENSPCOG00000020958) #20 ENSPCOG00000022483 #22 ENSPCOG00000019625 SPATA1 (ENSPCOG00000028221) #23 CTBS (ENSPCOG00000021717) #24 SSX2IP (ENSPCOG00000011853) #27 LPAR3 (ENSPCOG00000020815) #29 MCOLN2 (ENSPCOG00000017147) #30 MCOLN3 (ENSPCOG00000021992) ##30 DNAI3 (ENSPCOG00000007531) SYDE2 (ENSPCOG00000019185) C1orf52 (ENSPCOG00000022149) BCL10 (ENSPCOG00000026735) DDAH1 (ENSPCOG00000028125) ENSPCOG00000013303 CCN1 (ENSPCOG00000020683) ZNHIT6 (ENSPCOG00000014824) Mouse lemur DUPLICATION Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 169 ENSMICG00000026397 SRPX (ENSMICG00000001454) SYTL5 (ENSMICG00000045851) ENSMICG00000033194 CYBB (ENSMICG00000026872) XK (ENSMICG00000047814) LANCL3 (ENSMICG00000005180) PRRG1 (ENSMICG00000043549) ENSMICG00000032179 ENSMICG00000034748 ENSMICG00000031482 ENSMICG00000035221 ENSMICG00000026518 ENSMICG00000041675 ENSMICG00000037213 ENSMICG00000015146 #22 PPP2R3B (ENSMICG00000030474) GTPBP6 (ENSMICG00000044435) PLCXD1 (ENSMICG00000045160) SHOX (ENSMICG00000014601) ENSMICG00000004731 ENSMICG00000033357 ENSMICG00000027916 ENSMICG00000042557 TMEM47 (ENSMICG00000044159) ENSMICG00000042840 ENSMICG00000042555 ENSMICG00000032834 DMD (ENSMICG00000028112) ENSMICG00000047999 TAB3 (ENSMICG00000032994) Mouse lemur MODERN SPECIES 11 ENSMICG00000014463 DNAJB4 (ENSMICG00000014487) GIPC2 (ENSMICG00000014492) PTGFR (ENSMICG00000035932) ##10 IFI44L (ENSMICG00000031708) IFI44 (ENSMICG00000001235) ADGRL4 (ENSMICG00000014527) #14 ADGRL2 (ENSMICG00000009066) ##15 TTLL7 (ENSMICG00000016281) #16 PRKACB (ENSMICG00000003079) ENSMICG00000047801 SAMD13 (ENSMICG00000036198) #18 ENSMICG00000042739 ENSMICG00000037252 #19 DNASE2B (ENSMICG00000037013) #20 ENSMICG00000003093 #22 ENSMICG00000027648 SPATA1 (ENSMICG00000034514) #23 CTBS (ENSMICG00000047868) #24 SSX2IP (ENSMICG00000031693) #27 LPAR3 (ENSMICG00000034976) #29 MCOLN2 (ENSMICG00000014951) #30 MCOLN3 (ENSMICG00000014973) ##30 DNAI3 (ENSMICG00000014988) SYDE2 (ENSMICG00000036942) C1orf52 (ENSMICG00000015748) BCL10 (ENSMICG00000046947) ENSMICG00000029851 DDAH1 (ENSMICG00000015756) ENSMICG00000033242 CCN1 (ENSMICG00000015764) Mouse lemur MODERN SPECIES 27 GSTP1 (ENSMICG00000035404) CABP2 (ENSMICG00000006052) CDK2AP2 (ENSMICG00000029533) PITPNM1 (ENSMICG00000004138) AIP (ENSMICG00000037390) TMEM134 (ENSMICG00000031454) CABP4 (ENSMICG00000004133) CORO1B (ENSMICG00000004114) RPS6KB2 (ENSMICG00000004111) CARNS1 (ENSMICG00000004109) TBC1D10C (ENSMICG00000004107) PPP1CA (ENSMICG00000004103) RAD9A (ENSMICG00000035662) CLCF1 (ENSMICG00000029277) POLD4 (ENSMICG00000004091) ENSMICG00000012349 #22 SSH3 (ENSMICG00000004087) ANKRD13D (ENSMICG00000004074) ##8 GRK2 (ENSMICG00000004063) KDM2A (ENSMICG00000004044) RHOD (ENSMICG00000015500) SYT12 (ENSMICG00000015472) C11orf86 (ENSMICG00000026449) LRFN4 (ENSMICG00000034770) PC (ENSMICG00000003862) RCE1 (ENSMICG00000003857) C11orf80 (ENSMICG00000003846) SPTBN2 (ENSMICG00000003823) RBM4B (ENSMICG00000003820) RBM14 (ENSMICG00000031929) CCS (ENSMICG00000026552) Haplorrhini ANCESTRAL SPECIES 1 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00390000017201 Tarsier MODERN SPECIES 5619 SAMD13 (ENSTSYG00000000398) #18 ENSTSYG00000028321 #19 DNASE2B (ENSTSYG00000013883) #20 RPF1 (ENSTSYG00000009961) #22 ENSTSYG00000027698 SPATA1 (ENSTSYG00000010029) #23 CTBS (ENSTSYG00000010036) #24 SSX2IP (ENSTSYG00000004276) #27 LPAR3 (ENSTSYG00000010815) #29 MCOLN2 (ENSTSYG00000005578) #30 MCOLN3 (ENSTSYG00000008984) ##30 WDR63 (ENSTSYG00000008813) SYDE2 (ENSTSYG00000008423) CUNH1orf52 (ENSTSYG00000035862) BCL10 (ENSTSYG00000010772) DDAH1 (ENSTSYG00000036511) CCN1 (ENSTSYG00000004929) ZNHIT6 (ENSTSYG00000031685) COL24A1 (ENSTSYG00000007947) Simiiformes ANCESTRAL SPECIES 3 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00910000147782 Catarrhini ANCESTRAL SPECIES 3 ENSGT00390000008565.b ENSGT00940000167496 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00910000147782 Hominoidea ANCESTRAL SPECIES 3 ENSGT00940000157311 ENSGT00390000008565.b ENSGT00940000167496 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00390000017201 Hominidae ANCESTRAL SPECIES 3 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00390000017201 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00390000017201 Gorilla MODERN SPECIES IFI44L (ENSGGOG00000013652) ENSGGOG00000039692 IFI44 (ENSGGOG00000013663) ADGRL4 (ENSGGOG00000026803) #14 ENSGGOG00000025574 ENSGGOG00000028020 ADGRL2 (ENSGGOG00000016317) ##15 ENSGGOG00000042078 TTLL7 (ENSGGOG00000028394) #16 PRKACB (ENSGGOG00000027086) ENSGGOG00000038622 ENSGGOG00000039232 SAMD13 (ENSGGOG00000002150) #18 ENSGGOG00000042098 #19 DNASE2B (ENSGGOG00000007963) #20 RPF1 (ENSGGOG00000015862) #22 ENSGGOG00000026782 ENSGGOG00000039621 #23 CTBS (ENSGGOG00000015738) #24 SSX2IP (ENSGGOG00000002229) #27 LPAR3 (ENSGGOG00000011067) #29 MCOLN2 (ENSGGOG00000012178) #30 MCOLN3 (ENSGGOG00000007413) ##30 DNAI3 (ENSGGOG00000024273) SYDE2 (ENSGGOG00000002813) C1orf52 (ENSGGOG00000027688) ENSGGOG00000044072 ENSGGOG00000041543 ENSGGOG00000037302 CCN1 (ENSGGOG00000006978) ZNHIT6 (ENSGGOG00000001289) Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00390000017201 Human MODERN SPECIES USP33 (ENSG00000077254) MIGA1 (ENSG00000180488) NEXN (ENSG00000162614) FUBP1 (ENSG00000162613) DNAJB4 (ENSG00000162616) GIPC2 (ENSG00000137960) PTGFR (ENSG00000122420) ##10 IFI44L (ENSG00000137959) IFI44 (ENSG00000137965) ADGRL4 (ENSG00000162618) #14 ADGRL2 (ENSG00000117114) ##15 TTLL7 (ENSG00000137941) #16 PRKACB (ENSG00000142875) SAMD13 (ENSG00000203943) #18 DNASE2B (ENSG00000137976) #20 RPF1 (ENSG00000117133) #22 GNG5 (ENSG00000174021) SPATA1 (ENSG00000122432) #23 CTBS (ENSG00000117151) #24 SSX2IP (ENSG00000117155) #27 LPAR3 (ENSG00000171517) #29 MCOLN2 (ENSG00000153898) #30 DNAI3 (ENSG00000162643) MCOLN3 (ENSG00000055732) ##30 SYDE2 (ENSG00000097096) C1orf52 (ENSG00000162642) BCL10 (ENSG00000142867) DDAH1 (ENSG00000153904) CCN1 (ENSG00000142871) ZNHIT6 (ENSG00000117174) COL24A1 (ENSG00000171502) Pan ANCESTRAL SPECIES ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000153241.A.k.a.a ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT01010000224294 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT00910000145621 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00390000017201 Chimpanzee MODERN SPECIES IFI44L (ENSPTRG00000000892) IFI44 (ENSPTRG00000000893) ENSPTRG00000052741 ADGRL4 (ENSPTRG00000000894) #14 ENSPTRG00000039978 ADGRL2 (ENSPTRG00000000896) ##15 ENSPTRG00000048586 ENSPTRG00000028441 TTLL7 (ENSPTRG00000000898) #16 PRKACB (ENSPTRG00000000899) ENSPTRG00000051420 ENSPTRG00000041946 SAMD13 (ENSPTRG00000030549) #18 ENSPTRG00000043173 #19 DNASE2B (ENSPTRG00000000900) #20 RPF1 (ENSPTRG00000000901) #22 GNG5 (ENSPTRG00000000902) SPATA1 (ENSPTRG00000000903) #23 CTBS (ENSPTRG00000000904) #24 SSX2IP (ENSPTRG00000000906) #27 LPAR3 (ENSPTRG00000000907) #29 MCOLN2 (ENSPTRG00000000908) #30 MCOLN3 (ENSPTRG00000000909) ##30 DNAI3 (ENSPTRG00000000910) SYDE2 (ENSPTRG00000000912) C1H1orf52 (ENSPTRG00000000913) BCL10 (ENSPTRG00000000914) DDAH1 (ENSPTRG00000000915) ENSPTRG00000045650 CCN1 (ENSPTRG00000000916) ZNHIT6 (ENSPTRG00000000917) Bonobo MODERN SPECIES GIPC2 (ENSPPAG00000038573) PTGFR (ENSPPAG00000034207) ##10 IFI44L (ENSPPAG00000032207) ENSPPAG00000008179 IFI44 (ENSPPAG00000043212) ENSPPAG00000043937 ADGRL4 (ENSPPAG00000044128) #14 ENSPPAG00000036091 ADGRL2 (ENSPPAG00000027604) ##15 TTLL7 (ENSPPAG00000010019) #16 PRKACB (ENSPPAG00000031832) ENSPPAG00000028069 SAMD13 (ENSPPAG00000028733) #18 ENSPPAG00000042063 #19 DNASE2B (ENSPPAG00000031087) #20 RPF1 (ENSPPAG00000038610) #22 ENSPPAG00000034135 SPATA1 (ENSPPAG00000031268) #23 CTBS (ENSPPAG00000041122) #24 SSX2IP (ENSPPAG00000030204) #27 LPAR3 (ENSPPAG00000042081) #29 MCOLN2 (ENSPPAG00000035292) #30 MCOLN3 (ENSPPAG00000018460) ##30 DNAI3 (ENSPPAG00000028762) SYDE2 (ENSPPAG00000008094) C1orf52 (ENSPPAG00000033419) ENSPPAG00000039334 ENSPPAG00000032273 ENSPPAG00000008964 CCN1 (ENSPPAG00000036034) ZNHIT6 (ENSPPAG00000044095) Orangutan MODERN SPECIES DNAJB4 (ENSPPYG00000001217) GIPC2 (ENSPPYG00000001218) ENSPPYG00000001216 ##10 IFI44L (ENSPPYG00000001215) IFI44 (ENSPPYG00000001214) ADGRL4 (ENSPPYG00000001213) #14 ENSPPYG00000041170 ENSPPYG00000041068 ADGRL2 (ENSPPYG00000001211) ##15 TTLL7 (ENSPPYG00000001210) #16 PRKACB (ENSPPYG00000001209) ENSPPYG00000041194 ENSPPYG00000030371 ENSPPYG00000038224 #18 DNASE2B (ENSPPYG00000001207) #20 RPF1 (ENSPPYG00000001206) #22 GNG5 (ENSPPYG00000040658) SPATA1 (ENSPPYG00000001204) #23 CTBS (ENSPPYG00000001203) #24 SSX2IP (ENSPPYG00000001201) #27 LPAR3 (ENSPPYG00000001200) #29 MCOLN2 (ENSPPYG00000001199) #30 MCOLN3 (ENSPPYG00000001198) ##30 SYDE2 (ENSPPYG00000001196) C1orf52 (ENSPPYG00000001195) DNAI3 (ENSPPYG00000001197) BCL10 (ENSPPYG00000001194) DDAH1 (ENSPPYG00000001193) CCN1 (ENSPPYG00000001192) ZNHIT6 (ENSPPYG00000001191) COL24A1 (ENSPPYG00000001190) Gibbon MODERN SPECIES 2 GIPC2 (ENSNLEG00000009804) PTGFR (ENSNLEG00000009807) ##10 ENSNLEG00000033334 ADGRL4 (ENSNLEG00000009814) #14 ENSNLEG00000027320 ENSNLEG00000032666 ENSNLEG00000031776 ENSNLEG00000033982 ADGRL2 (ENSNLEG00000009826) ##15 TTLL7 (ENSNLEG00000009865) #16 ENSNLEG00000009911 PRKACB (ENSNLEG00000009888) SAMD13 (ENSNLEG00000009912) #18 ENSNLEG00000028021 #19 DNASE2B (ENSNLEG00000009919) #20 RPF1 (ENSNLEG00000009930) #22 ENSNLEG00000009934 ENSNLEG00000009935 #23 CTBS (ENSNLEG00000009947) #24 SSX2IP (ENSNLEG00000009961) #27 LPAR3 (ENSNLEG00000009986) #29 MCOLN2 (ENSNLEG00000009988) #30 MCOLN3 (ENSNLEG00000009997) ##30 DNAI3 (ENSNLEG00000010010) SYDE2 (ENSNLEG00000010018) C1orf52 (ENSNLEG00000010021) ENSNLEG00000032635 DDAH1 (ENSNLEG00000010030) CCN1 (ENSNLEG00000010037) ZNHIT6 (ENSNLEG00000010042) COL24A1 (ENSNLEG00000010050) Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00910000147782 Rhinopithecus ANCESTRAL SPECIES 112 ENSGT00910000147474 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a.c ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398.o ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00910000147782 ENSGT00390000017201 Black snub-nosed monkey MODERN SPECIES 272 ENSRBIG00000016096 TTLL7 (ENSRBIG00000040532) #16 PRKACB (ENSRBIG00000041063) ENSRBIG00000037107 ENSRBIG00000034373 #19 DNASE2B (ENSRBIG00000026207) #20 RPF1 (ENSRBIG00000031747) #22 ENSRBIG00000033339 SPATA1 (ENSRBIG00000042164) #23 CTBS (ENSRBIG00000037909) #24 SSX2IP (ENSRBIG00000036044) #27 LPAR3 (ENSRBIG00000029701) #29 PLA2R1 (ENSRBIG00000002315) ITGB6 (ENSRBIG00000041170) RBMS1 (ENSRBIG00000044262) Golden snub-nosed monkey MODERN SPECIES 2362 TTLL7 (ENSRROG00000036716) #16 PRKACB (ENSRROG00000022851) SAMD13 (ENSRROG00000042230) #18 ENSRROG00000023758 #19 DNASE2B (ENSRROG00000037799) #20 ENSRROG00000036333 RPF1 (ENSRROG00000038090) #22 GNG5 (ENSRROG00000041242) SPATA1 (ENSRROG00000040432) #23 CTBS (ENSRROG00000027909) #24 SSX2IP (ENSRROG00000043233) #27 ENSRROG00000035313 #29 MCOLN2 (ENSRROG00000036998) #30 ENSRROG00000040243 ##30 DNAI3 (ENSRROG00000030691) SYDE2 (ENSRROG00000029434) ENSRROG00000027907 BCL10 (ENSRROG00000044289) DDAH1 (ENSRROG00000009892) CCN1 (ENSRROG00000028951) ZNHIT6 (ENSRROG00000028580) ENSRROG00000028931 Cercopithecinae ANCESTRAL SPECIES ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398.m ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00910000147782 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000000970.b.t.a ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398.m ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00910000147782 Macaca ANCESTRAL SPECIES ENSGT00940000163189 ENSGT00910000147246 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000153241.A.k.a.b.a ENSGT00940000155196.q.b.b ENSGT00910000148845 ENSGT00940000156348.C ##15 ENSGT01050000245180.a.d ENSGT00910000147474 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398.m ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00910000147782 Macaca_a ANCESTRAL SPECIES ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000153241.A.k.a.b.a ENSGT00940000156348.C ##15 ENSGT01050000245180.a.d ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.b.b ENSGT00390000017398.m ENSGT00490000043442 ENSGT00940000164709.a.b.b.a.b.b.a.b.a.b.a ENSGT00950000182971.B.b.d.`b.b ENSGT00940000157892 Crab-eating macaque MODERN SPECIES FUBP1 (ENSMFAG00000031825) DNAJB4 (ENSMFAG00000039494) GIPC2 (ENSMFAG00000059582) PTGFR (ENSMFAG00000041229) ##10 IFI44L (ENSMFAG00000035946) IFI44 (ENSMFAG00000037846) ADGRL4 (ENSMFAG00000032806) #14 ENSMFAG00000007031 ADGRL2 (ENSMFAG00000035421) ##15 ENSMFAG00000043283 TTLL7 (ENSMFAG00000042407) #16 PRKACB (ENSMFAG00000044118) SAMD13 (ENSMFAG00000058168) #18 ENSMFAG00000000740 #19 DNASE2B (ENSMFAG00000039951) #20 RPF1 (ENSMFAG00000003788) #22 GNG5 (ENSMFAG00000002373) SPATA1 (ENSMFAG00000038889) #23 CTBS (ENSMFAG00000043668) #24 SSX2IP (ENSMFAG00000036072) #27 LPAR3 (ENSMFAG00000038099) #29 MCOLN2 (ENSMFAG00000031312) #30 MCOLN3 (ENSMFAG00000033413) ##30 DNAI3 (ENSMFAG00000007665) SYDE2 (ENSMFAG00000001689) ENSMFAG00000063773 BCL10 (ENSMFAG00000040544) ENSMFAG00000048198 ENSMFAG00000002089 DDAH1 (ENSMFAG00000037521) CCN1 (ENSMFAG00000000180) Pig-tailed macaque MODERN SPECIES 582 ENSMNEG00000041066 IFI44 (ENSMNEG00000033036) ADGRL4 (ENSMNEG00000035199) #14 ENSMNEG00000042387 ENSMNEG00000032630 ENSMNEG00000001649 ENSMNEG00000025085 ADGRL2 (ENSMNEG00000040134) ##15 ENSMNEG00000039866 ENSMNEG00000003918 TTLL7 (ENSMNEG00000040306) #16 PRKACB (ENSMNEG00000039211) SAMD13 (ENSMNEG00000028489) #18 ENSMNEG00000032497 #19 DNASE2B (ENSMNEG00000033755) #20 RPF1 (ENSMNEG00000029462) #22 ENSMNEG00000037441 SPATA1 (ENSMNEG00000026868) #23 CTBS (ENSMNEG00000015862) #24 SSX2IP (ENSMNEG00000032502) #27 LPAR3 (ENSMNEG00000028515) #29 MCOLN2 (ENSMNEG00000031675) #30 MCOLN3 (ENSMNEG00000041473) ##30 DNAI3 (ENSMNEG00000038794) SYDE2 (ENSMNEG00000041819) ENSMNEG00000038949 BCL10 (ENSMNEG00000041167) DDAH1 (ENSMNEG00000044101) ENSMNEG00000027123 CCN1 (ENSMNEG00000044316) ENSMNEG00000028396 Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000000970.b.t.a ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398.m ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00910000147782 Olive baboon MODERN SPECIES FUBP1 (ENSPANG00000004797) DNAJB4 (ENSPANG00000014124) GIPC2 (ENSPANG00000006389) PTGFR (ENSPANG00000007569) ##10 IFI44L (ENSPANG00000009471) IFI44 (ENSPANG00000006003) ADGRL4 (ENSPANG00000006130) #14 ADGRL2 (ENSPANG00000007567) ##15 TTLL7 (ENSPANG00000015224) #16 ENSPANG00000046699 PRKACB (ENSPANG00000001346) SAMD13 (ENSPANG00000001347) #18 ENSPANG00000011777 #19 ENSPANG00000047198 DNASE2B (ENSPANG00000016899) #20 RPF1 (ENSPANG00000010052) #22 GNG5 (ENSPANG00000031198) SPATA1 (ENSPANG00000010807) #23 CTBS (ENSPANG00000005231) #24 SSX2IP (ENSPANG00000025619) #27 LPAR3 (ENSPANG00000036959) #29 MCOLN2 (ENSPANG00000000768) #30 DNAI3 (ENSPANG00000000769) MCOLN3 (ENSPANG00000006002) ##30 ENSPANG00000044964 SYDE2 (ENSPANG00000010806) C1orf52 (ENSPANG00000016435) ENSPANG00000016437 CCN1 (ENSPANG00000007480) ZNHIT6 (ENSPANG00000004996) COL24A1 (ENSPANG00000026362) Cercopithecinae_d ANCESTRAL SPECIES 19 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000153241.A.k.a.b ENSGT00910000148845 ENSGT00940000156348.C ##15 ENSGT01050000245180.a.d ENSGT00910000147474 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398.m ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00910000147782 Sooty mangabey MODERN SPECIES 206 ENSCATG00000016301 ADGRL2 (ENSCATG00000030418) ##15 ENSCATG00000016912 ENSCATG00000025478 ENSCATG00000022461 TTLL7 (ENSCATG00000029265) #16 PRKACB (ENSCATG00000042182) SAMD13 (ENSCATG00000031358) #18 ENSCATG00000040810 #19 DNASE2B (ENSCATG00000035673) #20 RPF1 (ENSCATG00000010531) #22 ENSCATG00000033299 SPATA1 (ENSCATG00000031914) #23 CTBS (ENSCATG00000040682) #24 SSX2IP (ENSCATG00000041325) #27 LPAR3 (ENSCATG00000032286) #29 MCOLN2 (ENSCATG00000031947) #30 MCOLN3 (ENSCATG00000005637) ##30 ENSCATG00000015242 DNAI3 (ENSCATG00000033130) SYDE2 (ENSCATG00000036631) C1orf52 (ENSCATG00000042900) BCL10 (ENSCATG00000033396) DDAH1 (ENSCATG00000029993) ENSCATG00000017253 CCN1 (ENSCATG00000033425) Drill MODERN SPECIES 844 ENSMLEG00000025772 #20 RPF1 (ENSMLEG00000038165) #22 GNG5 (ENSMLEG00000039037) SPATA1 (ENSMLEG00000040493) #23 CTBS (ENSMLEG00000033283) #24 SSX2IP (ENSMLEG00000024502) #27 LPAR3 (ENSMLEG00000043685) #29 MCOLN2 (ENSMLEG00000026041) #30 MCOLN3 (ENSMLEG00000034178) ##30 DNAI3 (ENSMLEG00000036533) SYDE2 (ENSMLEG00000041726) ENSMLEG00000000077 BCL10 (ENSMLEG00000036065) ENSMLEG00000036908 DDAH1 (ENSMLEG00000033808) ENSMLEG00000000851 CCN1 (ENSMLEG00000033648) Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 12 MIGA1 (ENSCSAG00000001400) NEXN (ENSCSAG00000001401) FUBP1 (ENSCSAG00000001402) DNAJB4 (ENSCSAG00000001403) GIPC2 (ENSCSAG00000001405) PTGFR (ENSCSAG00000001406) ##10 IFI44L (ENSCSAG00000001407) IFI44 (ENSCSAG00000001408) ADGRL4 (ENSCSAG00000001409) #14 ADGRL2 (ENSCSAG00000001410) ##15 TTLL7 (ENSCSAG00000001411) #16 PRKACB (ENSCSAG00000001413) SAMD13 (ENSCSAG00000001414) #18 ENSCSAG00000001415 #19 DNASE2B (ENSCSAG00000001416) #20 ENSCSAG00000001417 #22 SPATA1 (ENSCSAG00000001418) #23 CTBS (ENSCSAG00000001419) #24 SSX2IP (ENSCSAG00000001420) #27 LPAR3 (ENSCSAG00000001421) #29 MCOLN2 (ENSCSAG00000001422) #30 MCOLN3 (ENSCSAG00000001423) ##30 DNAI3 (ENSCSAG00000001424) SYDE2 (ENSCSAG00000001425) ENSCSAG00000001426 BCL10 (ENSCSAG00000001427) DDAH1 (ENSCSAG00000001428) CCN1 (ENSCSAG00000001429) ZNHIT6 (ENSCSAG00000001430) COL24A1 (ENSCSAG00000001431) ODF2L (ENSCSAG00000001432) Vervet Monkey MODERN SPECIES 24 PRKCB (ENSCSAG00000006641) CHP2 (ENSCSAG00000006646) ERN2 (ENSCSAG00000006703) PLK1 (ENSCSAG00000006734) DCTN5 (ENSCSAG00000006743) PALB2 (ENSCSAG00000006775) NDUFAB1 (ENSCSAG00000006791) UBFD1 (ENSCSAG00000006797) EARS2 (ENSCSAG00000006802) GGA2 (ENSCSAG00000006835) COG7 (ENSCSAG00000006890) SCNN1B (ENSCSAG00000006908) SCNN1G (ENSCSAG00000006915) USP31 (ENSCSAG00000006919) HS3ST2 (ENSCSAG00000006925) ENSCSAG00000018855 #22 OTOA (ENSCSAG00000006969) IGSF6 (ENSCSAG00000006991) METTL9 (ENSCSAG00000007017) CDR2 (ENSCSAG00000007027) POLR3E (ENSCSAG00000007035) EEF2K (ENSCSAG00000007050) SDR42E2 (ENSCSAG00000007059) VWA3A (ENSCSAG00000007122) MOSMO (ENSCSAG00000007141) PDZD9 (ENSCSAG00000007148) UQCRC2 (ENSCSAG00000007156) ENSCSAG00000007276 CRYM (ENSCSAG00000007345) ANKS4B (ENSCSAG00000007352) ZP2 (ENSCSAG00000007417) Platyrrhini ANCESTRAL SPECIES ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00390000001347.wb ENSGT00910000146844 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00530000064086.j ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186836 ENSGT00940000155151.b ENSGT00910000147782 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 423 CCDC62 (ENSANAG00000022821) HIP1R (ENSANAG00000026322) VPS37B (ENSANAG00000033036) ABCB9 (ENSANAG00000029110) OGFOD2 (ENSANAG00000016780) ARL6IP4 (ENSANAG00000035845) PITPNM2 (ENSANAG00000028804) MPHOSPH9 (ENSANAG00000025443) MTRFR (ENSANAG00000022881) CDK2AP1 (ENSANAG00000026633) SBNO1 (ENSANAG00000029958) ENSANAG00000035218 RILPL2 (ENSANAG00000024015) SNRNP35 (ENSANAG00000025109) RILPL1 (ENSANAG00000032127) ENSANAG00000035829 #22 TMED2 (ENSANAG00000027113) DDX55 (ENSANAG00000034064) EIF2B1 (ENSANAG00000027417) GTF2H3 (ENSANAG00000034712) TCTN2 (ENSANAG00000021707) ATP6V0A2 (ENSANAG00000034704) DNAH10 (ENSANAG00000028344) ENSANAG00000021361 ENSANAG00000025189 ZNF664 (ENSANAG00000006434) ENSANAG00000032215 RFLNA (ENSANAG00000026947) NCOR2 (ENSANAG00000033812) SCARB1 (ENSANAG00000034780) ENSANAG00000023048 Mas night monkey MODERN SPECIES 1222 IFI44 (ENSANAG00000037840) ADGRL4 (ENSANAG00000033541) #14 ENSANAG00000026461 ENSANAG00000014411 ENSANAG00000032415 ENSANAG00000026509 ADGRL2 (ENSANAG00000036995) ##15 TTLL7 (ENSANAG00000024884) #16 PRKACB (ENSANAG00000024480) ENSANAG00000020653 SAMD13 (ENSANAG00000035857) #18 ENSANAG00000033696 ENSANAG00000025747 #19 DNASE2B (ENSANAG00000034051) #20 ENSANAG00000035698 RPF1 (ENSANAG00000035706) #22 GNG5 (ENSANAG00000037163) SPATA1 (ENSANAG00000028513) #23 ENSANAG00000034138 #24 SSX2IP (ENSANAG00000028935) #27 LPAR3 (ENSANAG00000021394) #29 MCOLN2 (ENSANAG00000035061) #30 MCOLN3 (ENSANAG00000014281) ##30 DNAI3 (ENSANAG00000033437) ENSANAG00000037128 SYDE2 (ENSANAG00000037204) ENSANAG00000019838 BCL10 (ENSANAG00000032404) DDAH1 (ENSANAG00000036589) ENSANAG00000020702 CCN1 (ENSANAG00000021011) Cebidae ANCESTRAL SPECIES 1 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00390000001347.wb ENSGT00910000146844 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00530000064086.j ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00910000147782 ENSGT00390000017201 Marmoset MODERN SPECIES 19 ADGRL4 (ENSCJAG00000007171) #14 ENSCJAG00000084751 ENSCJAG00000079091 ENSCJAG00000085941 ADGRL2 (ENSCJAG00000007190) ##15 ENSCJAG00000085077 ENSCJAG00000084592 ENSCJAG00000079597 ENSCJAG00000084484 ENSCJAG00000073777 TTLL7 (ENSCJAG00000007255) #16 PRKACB (ENSCJAG00000007331) SAMD13 (ENSCJAG00000038186) #18 ENSCJAG00000007377 #19 DNASE2B (ENSCJAG00000007380) #20 RPF1 (ENSCJAG00000007400) #22 ENSCJAG00000087345 SPATA1 (ENSCJAG00000007432) #23 CTBS (ENSCJAG00000007444) #24 SSX2IP (ENSCJAG00000007456) #27 LPAR3 (ENSCJAG00000039205) #29 MCOLN2 (ENSCJAG00000006843) #30 SYDE2 (ENSCJAG00000007003) DNAI3 (ENSCJAG00000006895) ENSCJAG00000007022 BCL10 (ENSCJAG00000052966) DDAH1 (ENSCJAG00000040455) CCN1 (ENSCJAG00000012726) ZNHIT6 (ENSCJAG00000007041) COL24A1 (ENSCJAG00000007060) ODF2L (ENSCJAG00000007184) Cebidae_a ANCESTRAL SPECIES ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00390000001347.wb ENSGT00910000146844 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00530000064086.j ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00910000147804 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000013931.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00910000147782 Capuchin MODERN SPECIES 261 TTLL7 (ENSCCAG00000032099) #16 PRKACB (ENSCCAG00000021814) ENSCCAG00000030670 SAMD13 (ENSCCAG00000024780) #18 ENSCCAG00000024817 ENSCCAG00000021796 #19 DNASE2B (ENSCCAG00000031055) #20 RPF1 (ENSCCAG00000038077) #22 ENSCCAG00000025681 SPATA1 (ENSCCAG00000033239) #23 CTBS (ENSCCAG00000034072) #24 SSX2IP (ENSCCAG00000025619) #27 LPAR3 (ENSCCAG00000022881) #29 MCOLN2 (ENSCCAG00000021351) #30 MCOLN3 (ENSCCAG00000024680) ##30 DNAI3 (ENSCCAG00000034917) SYDE2 (ENSCCAG00000011416) ENSCCAG00000032916 C1orf52 (ENSCCAG00000022391) BCL10 (ENSCCAG00000036016) DDAH1 (ENSCCAG00000031737) CCN1 (ENSCCAG00000022293) ZNHIT6 (ENSCCAG00000035034) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 198 CYSLTR2 (ENSSBOG00000025475) ENSSBOG00000019051 RCBTB2 (ENSSBOG00000026825) LPAR6 (ENSSBOG00000036320) ENSSBOG00000026221 RB1 (ENSSBOG00000027893) ITM2B (ENSSBOG00000018913) MED4 (ENSSBOG00000024066) NUDT15 (ENSSBOG00000020573) ENSSBOG00000029965 ENSSBOG00000030465 ENSSBOG00000026010 ENSSBOG00000033017 HTR2A (ENSSBOG00000030657) ESD (ENSSBOG00000023081) ENSSBOG00000023599 #22 LRCH1 (ENSSBOG00000035307) Bolivian squirrel monkey MODERN SPECIES 45 GIPC2 (ENSSBOG00000026116) PTGFR (ENSSBOG00000023342) ##10 IFI44L (ENSSBOG00000005268) IFI44 (ENSSBOG00000027429) ADGRL4 (ENSSBOG00000023665) #14 ENSSBOG00000021965 ENSSBOG00000035750 ADGRL2 (ENSSBOG00000032564) ##15 TTLL7 (ENSSBOG00000022154) #16 PRKACB (ENSSBOG00000032735) ENSSBOG00000026089 SAMD13 (ENSSBOG00000035540) #18 ENSSBOG00000023319 #19 DNASE2B (ENSSBOG00000036044) #20 ENSSBOG00000029709 RPF1 (ENSSBOG00000020439) #22 ENSSBOG00000025678 SPATA1 (ENSSBOG00000032732) #23 CTBS (ENSSBOG00000029974) #24 SSX2IP (ENSSBOG00000030187) #27 LPAR3 (ENSSBOG00000022469) #29 MCOLN2 (ENSSBOG00000019614) #30 MCOLN3 (ENSSBOG00000031702) ##30 DNAI3 (ENSSBOG00000020387) SYDE2 (ENSSBOG00000032922) ENSSBOG00000031654 C1orf52 (ENSSBOG00000023463) BCL10 (ENSSBOG00000032733) ENSSBOG00000021699 DDAH1 (ENSSBOG00000029891) CCN1 (ENSSBOG00000018139) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Glires ANCESTRAL SPECIES ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Lagomorpha ANCESTRAL SPECIES 73 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00960000193082 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 Pika MODERN SPECIES 493 RPF1 (ENSOPRG00000002637) #22 ENSOPRG00000002652 #23 Rabbit DUPLICATION Rabbit MODERN SPECIES 4 PTGFR (ENSOCUG00000002522) ##10 IFI44L (ENSOCUG00000024378) IFI44 (ENSOCUG00000006482) ADGRL4 (ENSOCUG00000011390) #14 ENSOCUG00000027270 ENSOCUG00000037295 ADGRL2 (ENSOCUG00000013639) ##15 ENSOCUG00000036970 TTLL7 (ENSOCUG00000008140) #16 ENSOCUG00000036667 ENSOCUG00000039315 PRKACB (ENSOCUG00000012937) ENSOCUG00000023908 ENSOCUG00000029744 #20 ENSOCUG00000027397 #19 ENSOCUG00000014803 #22 GNG5 (ENSOCUG00000036571) SPATA1 (ENSOCUG00000006613) #23 CTBS (ENSOCUG00000003059) #24 ENSOCUG00000032268 SSX2IP (ENSOCUG00000015685) #27 LPAR3 (ENSOCUG00000024789) #29 ENSOCUG00000027616 MCOLN2 (ENSOCUG00000009322) #30 MCOLN3 (ENSOCUG00000009332) ##30 DNAI3 (ENSOCUG00000010160) SYDE2 (ENSOCUG00000022246) C1orf52 (ENSOCUG00000002803) ENSOCUG00000035286 BCL10 (ENSOCUG00000016199) DDAH1 (ENSOCUG00000005249) Rabbit MODERN SPECIES 12 GARIN2 (ENSOCUG00000016396) GPHN (ENSOCUG00000000898) ENSOCUG00000034313 CCDC196 (ENSOCUG00000025913) FUT8 (ENSOCUG00000004667) MAX (ENSOCUG00000014439) ENSOCUG00000014429 ENSOCUG00000037657 ENSOCUG00000013411 CCDC175 (ENSOCUG00000013421) LRRC9 (ENSOCUG00000002335) PCNX4 (ENSOCUG00000029440) DHRS7 (ENSOCUG00000002249) PPM1A (ENSOCUG00000009955) C14orf39 (ENSOCUG00000004745) ENSOCUG00000038439 #22 SIX6 (ENSOCUG00000004752) SIX1 (ENSOCUG00000014268) ENSOCUG00000036648 MNAT1 (ENSOCUG00000014274) TRMT5 (ENSOCUG00000014281) SLC38A6 (ENSOCUG00000014287) ENSOCUG00000038053 TMEM30B (ENSOCUG00000012236) PRKCH (ENSOCUG00000015859) HIF1A (ENSOCUG00000017741) SNAPC1 (ENSOCUG00000014094) SYT16 (ENSOCUG00000016867) ENSOCUG00000026292 KCNH5 (ENSOCUG00000008859) RHOJ (ENSOCUG00000005357) Rodentia ANCESTRAL SPECIES ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Rodentia_B ANCESTRAL SPECIES ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Kangaroo rat MODERN SPECIES 358 Nexn (ENSDORG00000016532) Fubp1 (ENSDORG00000016534) Dnajb4 (ENSDORG00000027510) Gipc2 (ENSDORG00000008668) ENSDORG00000024167 Ptgfr (ENSDORG00000025401) ##10 Ifi44 (ENSDORG00000027792) Adgrl4 (ENSDORG00000000288) #14 Adgrl2 (ENSDORG00000005436) ##15 Ttll7 (ENSDORG00000012053) #16 Prkacb (ENSDORG00000004341) Samd13 (ENSDORG00000026931) #18 4930503B20Rik (ENSDORG00000029007) Uox (ENSDORG00000027583) #19 Dnase2b (ENSDORG00000000604) #20 Rpf1 (ENSDORG00000000607) #22 ENSDORG00000024192 ENSDORG00000029873 #23 ENSDORG00000029065 #23 Ctbs (ENSDORG00000015059) #24 Ssx2ip (ENSDORG00000015060) #27 Lpar3 (ENSDORG00000014630) #29 Mcoln2 (ENSDORG00000014631) #30 Mcoln3 (ENSDORG00000014635) ##30 Dnai3 (ENSDORG00000015030) Syde2 (ENSDORG00000005799) 2410004B18Rik (ENSDORG00000012509) ENSDORG00000028780 Ddah1 (ENSDORG00000013259) Ccn1 (ENSDORG00000005602) Znhit6 (ENSDORG00000029755) Myomorpha ANCESTRAL SPECIES 12 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Lesser Egyptian jerboa MODERN SPECIES 52 Usp33 (ENSJJAG00000016177) Miga1 (ENSJJAG00000016762) Nexn (ENSJJAG00000012487) Fubp1 (ENSJJAG00000020069) Gipc2 (ENSJJAG00000010357) Dnajb4 (ENSJJAG00000016999) Ptgfr (ENSJJAG00000017381) ##10 Adgrl4 (ENSJJAG00000015991) #14 Adgrl2 (ENSJJAG00000021839) ##15 Ttll7 (ENSJJAG00000021112) #16 Prkacb (ENSJJAG00000011827) Samd13 (ENSJJAG00000021117) #18 4930503B20Rik (ENSJJAG00000022696) Uox (ENSJJAG00000008960) #19 Dnase2b (ENSJJAG00000009922) #20 Rpf1 (ENSJJAG00000018873) #22 ENSJJAG00000011539 ENSJJAG00000014898 #23 ENSJJAG00000006619 #23 Ctbs (ENSJJAG00000018386) #24 Ssx2ip (ENSJJAG00000010467) #27 Lpar3 (ENSJJAG00000021688) #29 Mcoln2 (ENSJJAG00000014832) #30 Mcoln3 (ENSJJAG00000023078) ##30 Dnai3 (ENSJJAG00000023564) Syde2 (ENSJJAG00000018610) 2410004B18Rik (ENSJJAG00000011597) Bcl10 (ENSJJAG00000001473) Ddah1 (ENSJJAG00000016256) ENSJJAG00000012670 Ccn1 (ENSJJAG00000018163) Muroidea ANCESTRAL SPECIES 6 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Upper Galilee mountains blind mole rat MODERN SPECIES 1893 Adgrl4 (ENSNGAG00000018919) #14 Adgrl2 (ENSNGAG00000012039) ##15 ENSNGAG00000013365 #16 ENSNGAG00000010900 Prkacb (ENSNGAG00000023069) Samd13 (ENSNGAG00000013463) #18 4930503B20Rik (ENSNGAG00000021614) Uox (ENSNGAG00000022385) #19 Dnase2b (ENSNGAG00000011775) #20 Rpf1 (ENSNGAG00000018028) #22 ENSNGAG00000018264 Spata1 (ENSNGAG00000019652) #23 Ctbs (ENSNGAG00000008828) #24 Ssx2ip (ENSNGAG00000001910) #27 Lpar3 (ENSNGAG00000020209) #29 Mcoln2 (ENSNGAG00000016270) #30 Mcoln3 (ENSNGAG00000018883) ##30 Dnai3 (ENSNGAG00000011144) Syde2 (ENSNGAG00000012962) 2410004B18Rik (ENSNGAG00000014421) Bcl10 (ENSNGAG00000015335) Ddah1 (ENSNGAG00000018033) ENSNGAG00000003738 Ccn1 (ENSNGAG00000001335) Znhit6 (ENSNGAG00000007630) Muroidea_A ANCESTRAL SPECIES 5 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Murinae ANCESTRAL SPECIES 5 ENSGT00940000160043 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Mus ANCESTRAL SPECIES 7 ENSGT00940000160043 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Mus_A ANCESTRAL SPECIES 9 ENSGT00940000160043 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Mus_B ANCESTRAL SPECIES 8 ENSGT00940000160043 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.a ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Mouse MODERN SPECIES 12 Nexn (ENSMUSG00000039103) Fubp1 (ENSMUSG00000028034) Dnajb4 (ENSMUSG00000028035) Gipc2 (ENSMUSG00000039131) Ptgfr (ENSMUSG00000028036) ##10 Ifi44l (ENSMUSG00000039146) Ifi44 (ENSMUSG00000028037) Adgrl4 (ENSMUSG00000039167) #14 Adgrl2 (ENSMUSG00000028184) ##15 Ttll7 (ENSMUSG00000036745) #16 Prkacb (ENSMUSG00000005034) Samd13 (ENSMUSG00000048652) #18 4930503B20Rik (ENSMUSG00000090202) Dnase2b (ENSMUSG00000028185) #20 Uox (ENSMUSG00000028186) #19 Rpf1 (ENSMUSG00000028187) #22 Gng5 (ENSMUSG00000068523) Spata1 (ENSMUSG00000028188) #23 Ctbs (ENSMUSG00000028189) #24 Ssx2ip (ENSMUSG00000036825) #27 Lpar3 (ENSMUSG00000036832) #29 Mcoln2 (ENSMUSG00000011008) #30 Mcoln3 (ENSMUSG00000036853) ##30 Dnai3 (ENSMUSG00000043020) Syde2 (ENSMUSG00000036863) 2410004B18Rik (ENSMUSG00000036873) Bcl10 (ENSMUSG00000028191) Ddah1 (ENSMUSG00000028194) Ccn1 (ENSMUSG00000028195) Znhit6 (ENSMUSG00000074182) Col24a1 (ENSMUSG00000028197) Mus_C ANCESTRAL SPECIES 6 ENSGT00940000160043 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Steppe mouse MODERN SPECIES 3408 Ttll7 (ENSMSIG00000007932) #16 Prkacb (ENSMSIG00000007822) 4930503B20Rik (ENSMSIG00000007775) ENSMSIG00000007717 #19 Dnase2b (ENSMSIG00000007688) #20 Rpf1 (ENSMSIG00000007632) #22 ENSMSIG00000007613 Spata1 (ENSMSIG00000007443) #23 Ctbs (ENSMSIG00000007413) #24 Ssx2ip (ENSMSIG00000007247) #27 ENSMSIG00000007226 Lpar3 (ENSMSIG00000007212) #29 Mcoln2 (ENSMSIG00000007140) #30 Mcoln3 (ENSMSIG00000007086) ##30 Dnai3 (ENSMSIG00000007023) Syde2 (ENSMSIG00000006994) 2410004B18Rik (ENSMSIG00000006989) Bcl10 (ENSMSIG00000006967) Ddah1 (ENSMSIG00000006895) ENSMSIG00000006885 Ccn1 (ENSMSIG00000006855) spretus MODERN SPECIES 12 Nexn (MGP_SPRETEiJ_G0026694) Fubp1 (MGP_SPRETEiJ_G0026693) MGP_SPRETEiJ_G0026692 Gipc2 (MGP_SPRETEiJ_G0026691) Ptgfr (MGP_SPRETEiJ_G0026690) ##10 Ifi44l (MGP_SPRETEiJ_G0026689) Ifi44 (MGP_SPRETEiJ_G0026688) Adgrl4 (MGP_SPRETEiJ_G0026687) #14 Adgrl2 (MGP_SPRETEiJ_G0026686) ##15 Ttll7 (MGP_SPRETEiJ_G0026685) #16 Prkacb (MGP_SPRETEiJ_G0026684) Samd13 (MGP_SPRETEiJ_G0026683) #18 4930503B20Rik (MGP_SPRETEiJ_G0026682) Dnase2b (MGP_SPRETEiJ_G0026681) #20 Uox (MGP_SPRETEiJ_G0026680) #19 Rpf1 (MGP_SPRETEiJ_G0026679) #22 MGP_SPRETEiJ_G0026678 Spata1 (MGP_SPRETEiJ_G0026677) #23 Ctbs (MGP_SPRETEiJ_G0026676) #24 Ssx2ip (MGP_SPRETEiJ_G0026675) #27 Lpar3 (MGP_SPRETEiJ_G0026674) #29 Mcoln2 (MGP_SPRETEiJ_G0026673) #30 MGP_SPRETEiJ_G0026672 ##30 Dnai3 (MGP_SPRETEiJ_G0026671) Syde2 (MGP_SPRETEiJ_G0026670) 2410004B18Rik (MGP_SPRETEiJ_G0026669) MGP_SPRETEiJ_G0026668 Ddah1 (MGP_SPRETEiJ_G0026667) Ccn1 (MGP_SPRETEiJ_G0026666) Znhit6 (MGP_SPRETEiJ_G0026665) Col24a1 (MGP_SPRETEiJ_G0026664) Ryukyu mouse MODERN SPECIES 12 Nexn (MGP_CAROLIEiJ_G0025741) Fubp1 (MGP_CAROLIEiJ_G0025740) Dnajb4 (MGP_CAROLIEiJ_G0025739) Gipc2 (MGP_CAROLIEiJ_G0025738) Ptgfr (MGP_CAROLIEiJ_G0025737) ##10 Ifi44l (MGP_CAROLIEiJ_G0025736) Ifi44 (MGP_CAROLIEiJ_G0025735) Adgrl4 (MGP_CAROLIEiJ_G0025734) #14 Adgrl2 (MGP_CAROLIEiJ_G0025733) ##15 Ttll7 (MGP_CAROLIEiJ_G0025732) #16 Prkacb (MGP_CAROLIEiJ_G0025731) Samd13 (MGP_CAROLIEiJ_G0025730) #18 4930503B20Rik (MGP_CAROLIEiJ_G0025729) Dnase2b (MGP_CAROLIEiJ_G0025728) #20 Uox (MGP_CAROLIEiJ_G0025727) #19 Rpf1 (MGP_CAROLIEiJ_G0025726) #22 MGP_CAROLIEiJ_G0025725 Spata1 (MGP_CAROLIEiJ_G0025724) #23 Ctbs (MGP_CAROLIEiJ_G0025723) #24 Ssx2ip (MGP_CAROLIEiJ_G0025722) #27 Lpar3 (MGP_CAROLIEiJ_G0025721) #29 Mcoln2 (MGP_CAROLIEiJ_G0025720) #30 Mcoln3 (MGP_CAROLIEiJ_G0025719) ##30 Dnai3 (MGP_CAROLIEiJ_G0025718) Syde2 (MGP_CAROLIEiJ_G0025717) 2410004B18Rik (MGP_CAROLIEiJ_G0025716) Ddah1 (MGP_CAROLIEiJ_G0025715) Ccn1 (MGP_CAROLIEiJ_G0025714) Znhit6 (MGP_CAROLIEiJ_G0025713) Col24a1 (MGP_CAROLIEiJ_G0025712) Odf2l (MGP_CAROLIEiJ_G0025711) Shrew mouse MODERN SPECIES 17 Nexn (MGP_PahariEiJ_G0027192) Fubp1 (MGP_PahariEiJ_G0027191) Dnajb4 (MGP_PahariEiJ_G0027190) Gipc2 (MGP_PahariEiJ_G0027189) Ptgfr (MGP_PahariEiJ_G0027188) ##10 Ifi44l (MGP_PahariEiJ_G0027187) Ifi44 (MGP_PahariEiJ_G0027186) Adgrl4 (MGP_PahariEiJ_G0027185) #14 Adgrl2 (MGP_PahariEiJ_G0027184) ##15 Ttll7 (MGP_PahariEiJ_G0027183) #16 Prkacb (MGP_PahariEiJ_G0027182) Samd13 (MGP_PahariEiJ_G0027181) #18 4930503B20Rik (MGP_PahariEiJ_G0027180) Dnase2b (MGP_PahariEiJ_G0027179) #20 Uox (MGP_PahariEiJ_G0027178) #19 MGP_PahariEiJ_G0027177 #22 MGP_PahariEiJ_G0027176 Spata1 (MGP_PahariEiJ_G0027175) #23 Ctbs (MGP_PahariEiJ_G0027174) #24 Ssx2ip (MGP_PahariEiJ_G0027173) #27 Lpar3 (MGP_PahariEiJ_G0027172) #29 Mcoln2 (MGP_PahariEiJ_G0027171) #30 Mcoln3 (MGP_PahariEiJ_G0027170) ##30 Dnai3 (MGP_PahariEiJ_G0027169) Syde2 (MGP_PahariEiJ_G0027168) 2410004B18Rik (MGP_PahariEiJ_G0027167) Bcl10 (MGP_PahariEiJ_G0027166) Ddah1 (MGP_PahariEiJ_G0027165) Ccn1 (MGP_PahariEiJ_G0027164) Znhit6 (MGP_PahariEiJ_G0027163) Col24a1 (MGP_PahariEiJ_G0027162) Rat MODERN SPECIES 11 Dnajb4 (ENSRNOG00000013011) Gipc2 (ENSRNOG00000042152) Ptgfr (ENSRNOG00000046468) ##10 Ifi44l (ENSRNOG00000049994) Ifi44 (ENSRNOG00000022218) Adgrl4 (ENSRNOG00000033940) #14 AABR07013776.1 (ENSRNOG00000048082) ENSRNOG00000067115 Adgrl2 (ENSRNOG00000063253) ##15 Adgrl2 (ENSRNOG00000065347) ##15 Ttll7 (ENSRNOG00000031997) #16 Prkacb (ENSRNOG00000004978) Samd13 (ENSRNOG00000016432) Dnase2b (ENSRNOG00000016262) #20 Uox (ENSRNOG00000016339) #19 Rpf1 (ENSRNOG00000015969) #22 ENSRNOG00000068715 Spata1 (ENSRNOG00000015678) #23 Ctbs (ENSRNOG00000015573) #24 Ssx2ip (ENSRNOG00000015425) #27 Lpar3 (ENSRNOG00000064204) #29 Mcoln2 (ENSRNOG00000015089) #30 Mcoln3 (ENSRNOG00000015024) ##30 Dnai3 (ENSRNOG00000014893) Syde2 (ENSRNOG00000026186) C2h1orf52 (ENSRNOG00000014857) Bcl10 (ENSRNOG00000042389) Ddah1 (ENSRNOG00000014613) Ccn1 (ENSRNOG00000014350) Znhit6 (ENSRNOG00000030049) Col24a1 (ENSRNOG00000014143) Cricetidae ANCESTRAL SPECIES 6 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b.uc ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892.j ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Cricetinae ANCESTRAL SPECIES 12 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b.uc ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892.j ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Golden Hamster MODERN SPECIES 735 ENSMAUG00000011447 Prkacb (ENSMAUG00000002887) ENSMAUG00000019018 Uox (ENSMAUG00000014563) #19 Dnase2b (ENSMAUG00000019185) #20 Rpf1 (ENSMAUG00000006030) #22 ENSMAUG00000019525 Spata1 (ENSMAUG00000008313) #23 ENSMAUG00000008498 Ssx2ip (ENSMAUG00000013155) #27 Mcoln2 (ENSMAUG00000006761) #30 Mcoln3 (ENSMAUG00000018992) ##30 Dnai3 (ENSMAUG00000005774) Syde2 (ENSMAUG00000017505) 2410004B18Rik (ENSMAUG00000019352) ENSMAUG00000011334 Ddah1 (ENSMAUG00000012623) ENSMAUG00000017168 Ccn1 (ENSMAUG00000006075) ENSMAUG00000020898 Col24a1 (ENSMAUG00000010161) Chinese hamster chok1gshd MODERN SPECIES 219 Miga1 (ENSCGRG00001014599) Nexn (ENSCGRG00001020243) Fubp1 (ENSCGRG00001007103) Dnajb4 (ENSCGRG00001022849) Gipc2 (ENSCGRG00001023752) Ptgfr (ENSCGRG00001024153) ##10 Ifi44 (ENSCGRG00001024261) Adgrl4 (ENSCGRG00001000370) #14 Adgrl2 (ENSCGRG00001003175) ##15 Ttll7 (ENSCGRG00001012935) #16 PRKACB (ENSCGRG00001022775) Samd13 (ENSCGRG00001015430) #18 4930503B20Rik (ENSCGRG00001018506) Uox (ENSCGRG00001021254) #19 Dnase2b (ENSCGRG00001000256) #20 Rpf1 (ENSCGRG00001001189) #22 ENSCGRG00001011533 Spata1 (ENSCGRG00001008771) #23 Ctbs (ENSCGRG00001014407) #24 Ssx2ip (ENSCGRG00001019268) #27 Lpar3 (ENSCGRG00001024413) #29 Mcoln2 (ENSCGRG00001001707) #30 Mcoln3 (ENSCGRG00001004877) ##30 ENSCGRG00001011030 Syde2 (ENSCGRG00001014086) 2410004B18Rik (ENSCGRG00001015888) Bcl10 (ENSCGRG00001018169) Ddah1 (ENSCGRG00001019335) ENSCGRG00001016514 Ccn1 (ENSCGRG00001017662) Znhit6 (ENSCGRG00001018263) Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00910000147767 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00900000143848 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b.uc ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892.j ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Northern American deer mouse MODERN SPECIES 19 Gipc2 (ENSPEMG00000009983) Ptgfr (ENSPEMG00000029819) ##10 ENSPEMG00000030105 Ifi44 (ENSPEMG00000020837) Adgrl4 (ENSPEMG00000020379) #14 ENSPEMG00000030917 Adgrl2 (ENSPEMG00000021407) ##15 ENSPEMG00000022352 Ttll7 (ENSPEMG00000021600) #16 ENSPEMG00000024491 Prkacb (ENSPEMG00000030921) 4930503B20Rik (ENSPEMG00000023951) ENSPEMG00000028095 Uox (ENSPEMG00000023036) #19 Dnase2b (ENSPEMG00000023363) #20 Rpf1 (ENSPEMG00000023196) #22 Spata1 (ENSPEMG00000023282) #23 Ctbs (ENSPEMG00000006184) #24 Ssx2ip (ENSPEMG00000023032) #27 Lpar3 (ENSPEMG00000022406) #29 Mcoln2 (ENSPEMG00000015343) #30 Mcoln3 (ENSPEMG00000014566) ##30 Dnai3 (ENSPEMG00000023437) Syde2 (ENSPEMG00000022180) ENSPEMG00000028265 Bcl10 (ENSPEMG00000026389) Ddah1 (ENSPEMG00000027558) ENSPEMG00000031409 Ccn1 (ENSPEMG00000000386) Znhit6 (ENSPEMG00000022716) Col24a1 (ENSPEMG00000010634) Prairie vole MODERN SPECIES 8 Cth (ENSMOCG00000016949) #9 ENSMOCG00000002252 Ankrd13c (ENSMOCG00000022501) #8 Srsf11 (ENSMOCG00000011388) #7 Lrrc40 (ENSMOCG00000021998) Lrrc7 (ENSMOCG00000017587) Depdc1a (ENSMOCG00000021306) Rpe65 (ENSMOCG00000004259) Wls (ENSMOCG00000008906) ENSMOCG00000009024 ENSMOCG00000014236 Prkacb (ENSMOCG00000001336) Samd13 (ENSMOCG00000010216) #18 Uox (ENSMOCG00000016256) #19 Dnase2b (ENSMOCG00000000354) #20 Rpf1 (ENSMOCG00000018274) #22 ENSMOCG00000005222 ENSMOCG00000000334 #23 ENSMOCG00000022893 #23 Ctbs (ENSMOCG00000020087) #24 Ssx2ip (ENSMOCG00000014448) #27 Lpar3 (ENSMOCG00000012201) #29 Mcoln2 (ENSMOCG00000005258) #30 Mcoln3 (ENSMOCG00000011948) ##30 Dnai3 (ENSMOCG00000004827) Syde2 (ENSMOCG00000011613) 2410004B18Rik (ENSMOCG00000000971) Bcl10 (ENSMOCG00000004469) Ddah1 (ENSMOCG00000018589) ENSMOCG00000009612 Ccn1 (ENSMOCG00000013502) Rodentia_A ANCESTRAL SPECIES ENSGT00940000156826 ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Sciuridae ANCESTRAL SPECIES 3 ENSGT00940000160043 ENSGT00940000156826.r ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Marmotini ANCESTRAL SPECIES ENSGT00940000156826.r ENSGT00950000185225 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163189 ENSGT00940000162964 ENSGT00940000158252 #14 ENSGT01030000238694 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00390000003718.d.kd.b ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b Marmotini_b ANCESTRAL SPECIES 166 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398.i ENSGT00390000003718.d.kd.b ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b Arctic ground squirrel MODERN SPECIES 330 PRKACB (ENSUPAG00010011454) SAMD13 (ENSUPAG00010011529) #18 ENSUPAG00010011541 ENSUPAG00010011547 #19 DNASE2B (ENSUPAG00010011561) #20 RPF1 (ENSUPAG00010011580) #22 ENSUPAG00010011592 ENSUPAG00010011599 #23 CTBS (ENSUPAG00010011611) #24 SSX2IP (ENSUPAG00010011627) #27 LPAR3 (ENSUPAG00010011664) #29 MCOLN2 (ENSUPAG00010011678) #30 MCOLN3 (ENSUPAG00010011700) ##30 DNAI3 (ENSUPAG00010011711) SYDE2 (ENSUPAG00010011732) ENSUPAG00010011740 ENSUPAG00010011746 BCL10 (ENSUPAG00010011755) DDAH1 (ENSUPAG00010011761) ENSUPAG00010011773 CCN1 (ENSUPAG00010011774) Squirrel MODERN SPECIES 208 ADGRL2 (ENSSTOG00000023859) ##15 TTLL7 (ENSSTOG00000024406) #16 PRKACB (ENSSTOG00000003074) SAMD13 (ENSSTOG00000003083) #18 ENSSTOG00000022835 #19 DNASE2B (ENSSTOG00000023007) #20 RPF1 (ENSSTOG00000008635) #22 GNG5 (ENSSTOG00000008641) ENSSTOG00000033029 #23 ENSSTOG00000021329 #23 CTBS (ENSSTOG00000015319) #24 SSX2IP (ENSSTOG00000008644) #27 LPAR3 (ENSSTOG00000005282) #29 MCOLN2 (ENSSTOG00000011302) #30 MCOLN3 (ENSSTOG00000011310) ##30 DNAI3 (ENSSTOG00000012564) SYDE2 (ENSSTOG00000012586) C1orf52 (ENSSTOG00000010698) BCL10 (ENSSTOG00000027214) DDAH1 (ENSSTOG00000012594) ENSSTOG00000031250 CCN1 (ENSSTOG00000019882) Alpin marmot MODERN SPECIES 96 TTLL7 (ENSMMMG00000009236) #16 ENSMMMG00000009232 ENSMMMG00000009169 ENSMMMG00000009152 SAMD13 (ENSMMMG00000009129) #18 ENSMMMG00000009120 #19 DNASE2B (ENSMMMG00000009098) #20 RPF1 (ENSMMMG00000009079) #22 GNG5 (ENSMMMG00000009067) ENSMMMG00000009057 #23 CTBS (ENSMMMG00000009025) #24 SSX2IP (ENSMMMG00000008964) #27 LPAR3 (ENSMMMG00000008955) #29 MCOLN2 (ENSMMMG00000008910) #30 MCOLN3 (ENSMMMG00000008888) ##30 DNAI3 (ENSMMMG00000008854) SYDE2 (ENSMMMG00000008839) C1orf52 (ENSMMMG00000008832) ENSMMMG00000008825 ENSMMMG00000008820 DDAH1 (ENSMMMG00000008813) ENSMMMG00000008810 CCN1 (ENSMMMG00000008796) Eurasian red squirrel MODERN SPECIES ENSSVLG00005021876 DNAJB4 (ENSSVLG00005021899) ENSSVLG00005021924 GIPC2 (ENSSVLG00005021955) ENSSVLG00005022018 PTGFR (ENSSVLG00005022071) ##10 IFI44L (ENSSVLG00005022109) IFI44 (ENSSVLG00005022202) ADGRL4 (ENSSVLG00005022352) #14 ADGRL2 (ENSSVLG00005022731) ##15 TTLL7 (ENSSVLG00005022891) #16 PRKACB (ENSSVLG00005023190) SAMD13 (ENSSVLG00005000161) #18 ENSSVLG00005000176 #19 DNASE2B (ENSSVLG00005000189) #20 RPF1 (ENSSVLG00005000206) #22 ENSSVLG00005000219 SPATA1 (ENSSVLG00005000234) #23 CTBS (ENSSVLG00005000249) #24 SSX2IP (ENSSVLG00005000274) #27 LPAR3 (ENSSVLG00005000296) #29 MCOLN2 (ENSSVLG00005000331) #30 MCOLN3 (ENSSVLG00005000388) ##30 DNAI3 (ENSSVLG00005000535) SYDE2 (ENSSVLG00005000635) GABARAP (ENSSVLG00005000657) C1orf52 (ENSSVLG00005000674) BCL10 (ENSSVLG00005000684) ENSSVLG00005000702 ENSSVLG00005000713 DDAH1 (ENSSVLG00005000747) Hystricomorpha ANCESTRAL SPECIES 44 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Hystricomorpha_a ANCESTRAL SPECIES 14 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00960000186747 ENSGT00940000155151.b ENSGT00390000017201 Guinea pig MODERN SPECIES 2 USP33 (ENSCPOG00000003926) MIGA1 (ENSCPOG00000012285) NEXN (ENSCPOG00000002750) FUBP1 (ENSCPOG00000002757) DNAJB4 (ENSCPOG00000010555) GIPC2 (ENSCPOG00000000873) PTGFR (ENSCPOG00000036183) ##10 ADGRL4 (ENSCPOG00000010776) #14 ADGRL2 (ENSCPOG00000002947) ##15 ENSCPOG00000024579 TTLL7 (ENSCPOG00000009630) #16 PRKACB (ENSCPOG00000036250) SAMD13 (ENSCPOG00000031933) #18 ENSCPOG00000024987 #19 DNASE2B (ENSCPOG00000011531) #20 RPF1 (ENSCPOG00000014316) #22 ENSCPOG00000030942 ENSCPOG00000019991 #23 ENSCPOG00000033072 #23 CTBS (ENSCPOG00000009243) #24 SSX2IP (ENSCPOG00000012045) #27 LPAR3 (ENSCPOG00000035050) #29 MCOLN2 (ENSCPOG00000006755) #30 MCOLN3 (ENSCPOG00000030466) ##30 DNAI3 (ENSCPOG00000001550) SYDE2 (ENSCPOG00000001552) C1orf52 (ENSCPOG00000011795) BCL10 (ENSCPOG00000033375) DDAH1 (ENSCPOG00000035239) ENSCPOG00000034357 CCN1 (ENSCPOG00000010120) Hystricomorpha_b ANCESTRAL SPECIES 6 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B.w #22 ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000160313.k ENSGT00940000155151.b ENSGT00390000017201 Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 330 ENSODEG00000003080 #22 ENSODEG00000003099 ENSODEG00000018897 RTTN (ENSODEG00000003158) ENSODEG00000003185 CD226 (ENSODEG00000003216) DOK6 (ENSODEG00000000455) Degu MODERN SPECIES 144 ENSODEG00000001423 ENSODEG00000003179 BRWD3 (ENSODEG00000003272) SH3BGRL (ENSODEG00000003326) ENSODEG00000003422 ENSODEG00000003430 POU3F4 (ENSODEG00000019055) RPS6KA6 (ENSODEG00000003590) HDX (ENSODEG00000000832) ENSODEG00000000866 APOOL (ENSODEG00000000970) ENSODEG00000000990 ENSODEG00000001004 ZNF711 (ENSODEG00000001046) POF1B (ENSODEG00000001140) ENSODEG00000001180 #22 CHM (ENSODEG00000001208) ENSODEG00000018560 DACH2 (ENSODEG00000000554) ENSODEG00000000657 ENSODEG00000000679 KLHL4 (ENSODEG00000000734) ENSODEG00000000810 ENSODEG00000000827 ENSODEG00000000850 ENSODEG00000000697 Degu DUPLICATION Degu MODERN SPECIES 150 ADGRL2 (ENSODEG00000004117) ##15 ENSODEG00000002962 TTLL7 (ENSODEG00000002933) #16 PRKACB (ENSODEG00000003354) ENSODEG00000003211 SAMD13 (ENSODEG00000003201) #18 DNASE2B (ENSODEG00000003140) #20 ENSODEG00000003125 ENSODEG00000003070 #22 ENSODEG00000003027 ENSODEG00000002981 #23 ENSODEG00000005441 #23 CTBS (ENSODEG00000005131) #24 SSX2IP (ENSODEG00000004753) #27 ENSODEG00000019111 LPAR3 (ENSODEG00000004676) #29 MCOLN2 (ENSODEG00000004650) #30 MCOLN3 (ENSODEG00000004499) ##30 DNAI3 (ENSODEG00000003772) SYDE2 (ENSODEG00000003681) ENSODEG00000003641 ENSODEG00000003582 BCL10 (ENSODEG00000003555) DDAH1 (ENSODEG00000003545) Degu MODERN SPECIES 50 ENSODEG00000013715 FER (ENSODEG00000013121) PJA2 (ENSODEG00000013325) MAN2A1 (ENSODEG00000012752) ENSODEG00000012222 MDM4 (ENSODEG00000013499) PIK3C2B (ENSODEG00000012433) PPP1R15B (ENSODEG00000014053) PLEKHA6 (ENSODEG00000011957) GOLT1A (ENSODEG00000013193) KISS1 (ENSODEG00000015011) REN (ENSODEG00000013805) ETNK2 (ENSODEG00000011893) SOX13 (ENSODEG00000014124) ENSODEG00000020001 ENSODEG00000013517 #22 ENSODEG00000019942 SNRPE (ENSODEG00000013393) ENSODEG00000012788 ZBED6 (ENSODEG00000019959) ATP2B4 (ENSODEG00000013312) ENSODEG00000020037 OPTC (ENSODEG00000011941) PRELP (ENSODEG00000013597) FMOD (ENSODEG00000012164) BTG2 (ENSODEG00000012528) CHIT1 (ENSODEG00000012946) CHI3L1 (ENSODEG00000011673) MYBPH (ENSODEG00000011869) ADORA1 (ENSODEG00000012258) MYOG (ENSODEG00000011506) Long-tailed chinchilla MODERN SPECIES 130 USP33 (ENSCLAG00000004816) MIGA1 (ENSCLAG00000004098) NEXN (ENSCLAG00000005059) FUBP1 (ENSCLAG00000005621) DNAJB4 (ENSCLAG00000004442) GIPC2 (ENSCLAG00000004082) PTGFR (ENSCLAG00000007068) ##10 ADGRL4 (ENSCLAG00000011340) #14 ADGRL2 (ENSCLAG00000009367) ##15 TTLL7 (ENSCLAG00000006882) #16 PRKACB (ENSCLAG00000005809) ENSCLAG00000005050 SAMD13 (ENSCLAG00000004824) #18 DNASE2B (ENSCLAG00000004420) #20 ENSCLAG00000003910 #19 RPF1 (ENSCLAG00000007607) #22 ENSCLAG00000006867 #23 ENSCLAG00000009170 #23 CTBS (ENSCLAG00000013866) #24 SSX2IP (ENSCLAG00000012846) #27 LPAR3 (ENSCLAG00000005453) #29 MCOLN2 (ENSCLAG00000004888) #30 MCOLN3 (ENSCLAG00000004543) ##30 DNAI3 (ENSCLAG00000004279) SYDE2 (ENSCLAG00000004038) C1orf52 (ENSCLAG00000003961) BCL10 (ENSCLAG00000003932) DDAH1 (ENSCLAG00000003885) ENSCLAG00000017789 CCN1 (ENSCLAG00000015005) ZNHIT6 (ENSCLAG00000011251) Naked mole-rat female MODERN SPECIES 10 ELTD1 (ENSHGLG00000010852) #14 ENSHGLG00000021211 ENSHGLG00000020333 ENSHGLG00000050080 ENSHGLG00000008691 ##15 ENSHGLG00000049492 ENSHGLG00000014280 ENSHGLG00000005941 ENSHGLG00000004615 TTLL7 (ENSHGLG00000004763) #16 PRKACB (ENSHGLG00000037604) ENSHGLG00000049403 SAMD13 (ENSHGLG00000010026) #18 DNASE2B (ENSHGLG00000048352) #20 ENSHGLG00000009023 #19 RPF1 (ENSHGLG00000048402) #22 GNG5 (ENSHGLG00000005854) SPATA1 (ENSHGLG00000005825) #23 CTBS (ENSHGLG00000008383) #24 SSX2IP (ENSHGLG00000007408) #27 ENSHGLG00000035667 LPAR3 (ENSHGLG00000033915) #29 ENSHGLG00000005122 #30 MCOLN3 (ENSHGLG00000009140) ##30 ENSHGLG00000047666 ENSHGLG00000006816 SYDE2 (ENSHGLG00000005398) ENSHGLG00000039413 C1orf52 (ENSHGLG00000004452) BCL10 (ENSHGLG00000004369) ENSHGLG00000041300 Tree shrew DUPLICATION Tree shrew MODERN SPECIES 706 ENSTBEG00000013600 #22 ENSTBEG00000013935 Tree shrew MODERN SPECIES 5682 ENSTBEG00000012389 #22 Platypus MODERN SPECIES 15 USP33 (ENSOANG00000002941) MIGA1 (ENSOANG00000005105) NEXN (ENSOANG00000009778) ENSOANG00000009777 DNAJB4 (ENSOANG00000009776) GIPC2 (ENSOANG00000045789) PTGFR (ENSOANG00000004586) ##10 ADGRL4 (ENSOANG00000014561) #14 ENSOANG00000047211 ADGRL2 (ENSOANG00000004818) ##15 TTLL7 (ENSOANG00000005061) #16 ENSOANG00000041206 #17 ENSOANG00000038831 SAMD13 (ENSOANG00000049080) #18 ENSOANG00000014419 #19 RPF1 (ENSOANG00000043157) #22 ENSOANG00000021004 ENSOANG00000044361 CTBS (ENSOANG00000036257) #24 ENSOANG00000021944 #26 SSX2IP (ENSOANG00000003514) #27 LPAR3 (ENSOANG00000012529) #29 MCOLN2 (ENSOANG00000003513) #30 MCOLN3 (ENSOANG00000006237) ##30 DNAI3 (ENSOANG00000021511) SYDE2 (ENSOANG00000006822) ENSOANG00000047143 ENSOANG00000006824 CCN1 (ENSOANG00000009120) ENSOANG00000032029 ENSOANG00000047756 Sauria ANCESTRAL SPECIES 7 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163581 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01030000235381 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 Lepidosauria ANCESTRAL SPECIES 11 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163581 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01030000235381 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 Episquamata ANCESTRAL SPECIES 1 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163581 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01030000235381 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891.i #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 Toxicofera ANCESTRAL SPECIES 1 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891.i #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892 ENSGT00940000155151.b ENSGT00390000017201 ENSGT00940000163583 Elapidae ANCESTRAL SPECIES 1 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298.a #23 ENSGT00390000012891.i.d #24 ENSGT00390000012891.i.c #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00490000043442 ENSGT00940000157892.e ENSGT00940000155151.b ENSGT00390000017201 Elapidae_a ANCESTRAL SPECIES 7 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298.a #23 ENSGT00390000012891.i.d #24 ENSGT00390000012891.i.c #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892.e ENSGT00940000155151.b ENSGT00390000017201 Acanthophiinae ANCESTRAL SPECIES 5 ENSGT00730000111176.g ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000154721.b ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298.a #23 ENSGT00390000012891.i.d #24 ENSGT00390000012891.i.c #24 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892.e ENSGT00940000155151.b ENSGT00390000017201 Mainland tiger snake MODERN SPECIES 101 PTGFR (ENSNSUG00000006415) ##10 ENSNSUG00000006413 #13 ADGRL4 (ENSNSUG00000006408) #14 ENSNSUG00000006407 ADGRL2 (ENSNSUG00000006294) ##15 ENSNSUG00000006292 ENSNSUG00000006291 ENSNSUG00000006290 TTLL7 (ENSNSUG00000006289) #16 ENSNSUG00000006233 #17 ENSNSUG00000006232 SAMD13 (ENSNSUG00000006231) #18 ENSNSUG00000006229 #19 RPF1 (ENSNSUG00000006227) #22 ENSNSUG00000006226 SPATA1 (ENSNSUG00000006224) #23 ENSNSUG00000006222 #24 Eastern brown snake MODERN SPECIES 13 NEXN (ENSPTXG00000006345) FUBP1 (ENSPTXG00000006346) DNAJB4 (ENSPTXG00000006347) GIPC2 (ENSPTXG00000006348) PTGFR (ENSPTXG00000006349) ##10 ADGRL4 (ENSPTXG00000006350) #14 ADGRL2 (ENSPTXG00000006351) ##15 ENSPTXG00000006352 ENSPTXG00000006353 ENSPTXG00000006354 TTLL7 (ENSPTXG00000006355) #16 ENSPTXG00000006356 #17 SAMD13 (ENSPTXG00000006357) #18 ENSPTXG00000006358 ENSPTXG00000006359 #19 RPF1 (ENSPTXG00000006364) #22 ENSPTXG00000006365 SPATA1 (ENSPTXG00000006366) #23 ENSPTXG00000006367 #24 ENSPTXG00000006369 #24 ENSPTXG00000006370 ##26 SSX2IP (ENSPTXG00000006371) #27 LPAR3 (ENSPTXG00000006372) #29 MCOLN2 (ENSPTXG00000006373) #30 MCOLN3 (ENSPTXG00000006374) ##30 DNAI3 (ENSPTXG00000006375) SYDE2 (ENSPTXG00000006376) C1orf52 (ENSPTXG00000006377) ENSPTXG00000006378 DDAH1 (ENSPTXG00000006379) CCN1 (ENSPTXG00000006381) Blue-lipped sea krait MODERN SPECIES 1407 RPF1 (ENSLLTG00000002104) #22 ENSLLTG00000002098 Indian cobra MODERN SPECIES 2 USP33 (ENSNNAG00000001269) ENSNNAG00000001365 NEXN (ENSNNAG00000001464) FUBP1 (ENSNNAG00000001553) DNAJB4 (ENSNNAG00000001660) PTGFR (ENSNNAG00000001677) ##10 ADGRL4 (ENSNNAG00000001707) #14 ADGRL2 (ENSNNAG00000001776) ##15 ENSNNAG00000001845 TTLL7 (ENSNNAG00000001857) #16 ENSNNAG00000001881 #17 SAMD13 (ENSNNAG00000001902) #18 ENSNNAG00000001912 ENSNNAG00000001919 ENSNNAG00000001944 #19 RPF1 (ENSNNAG00000002000) #22 ENSNNAG00000002012 ENSNNAG00000002018 ENSNNAG00000002026 #23 ENSNNAG00000002030 #24 ENSNNAG00000002040 #24 SSX2IP (ENSNNAG00000002055) #27 LPAR3 (ENSNNAG00000002065) #29 MCOLN2 (ENSNNAG00000002081) #30 MCOLN3 (ENSNNAG00000002119) ##30 DNAI3 (ENSNNAG00000002193) SYDE2 (ENSNNAG00000002219) C1orf52 (ENSNNAG00000002225) BCL10 (ENSNNAG00000002231) DDAH1 (ENSNNAG00000002237) CCN1 (ENSNNAG00000002243) Lizard MODERN SPECIES 808 ENSACAG00000035508 ADGRL4 (ENSACAG00000006559) #14 ENSACAG00000006566 ENSACAG00000042877 ENSACAG00000040715 ADGRL2 (ENSACAG00000006572) ##15 ENSACAG00000038563 ENSACAG00000043312 ENSACAG00000042217 ENSACAG00000036494 TTLL7 (ENSACAG00000005860) #16 ENSACAG00000005844 #17 SAMD13 (ENSACAG00000044653) #18 ENSACAG00000005810 #19 DNASE2B (ENSACAG00000005782) #20 RPF1 (ENSACAG00000005753) #22 ENSACAG00000005743 SPATA1 (ENSACAG00000029579) #23 ENSACAG00000029634 #24 ENSACAG00000005676 #24 ENSACAG00000040254 ENSACAG00000041285 SSX2IP (ENSACAG00000005540) #27 LPAR3 (ENSACAG00000041455) #29 ENSACAG00000027083 MCOLN2 (ENSACAG00000012899) #30 ENSACAG00000023545 MCOLN3 (ENSACAG00000012969) ##30 DNAI3 (ENSACAG00000013029) SYDE2 (ENSACAG00000013112) C1orf52 (ENSACAG00000034963) Laterata ANCESTRAL SPECIES 3 ENSGT00940000156826 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163581 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01030000235381 ENSGT00530000063936.b #18 ENSGT00940000163788 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891.i.a #24 ENSGT00390000012891.j #24 ENSGT00390000012891.i.b #24 ENSGT00530000064273.a.b #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 Common wall lizard MODERN SPECIES 14 ENSPMRG00000009971 ENSPMRG00000009940 #13 ADGRL4 (ENSPMRG00000009916) #14 ENSPMRG00000008563 ENSPMRG00000008560 ENSPMRG00000008553 ENSPMRG00000008549 ADGRL2 (ENSPMRG00000008455) ##15 ENSPMRG00000008439 TTLL7 (ENSPMRG00000008385) #16 ENSPMRG00000008345 #17 ENSPMRG00000008328 SAMD13 (ENSPMRG00000008309) #18 ENSPMRG00000008278 #19 DNASE2B (ENSPMRG00000008269) #20 RPF1 (ENSPMRG00000008261) #22 ENSPMRG00000008254 SPATA1 (ENSPMRG00000008241) #23 ENSPMRG00000008232 #24 ENSPMRG00000008223 #24 ENSPMRG00000008194 #26 SSX2IP (ENSPMRG00000008172) #27 LPAR3 (ENSPMRG00000008163) #29 MCOLN2 (ENSPMRG00000008153) #30 MCOLN3 (ENSPMRG00000008145) ##30 DNAI3 (ENSPMRG00000008062) ENSPMRG00000008035 SYDE2 (ENSPMRG00000008032) C1orf52 (ENSPMRG00000008029) ENSPMRG00000008025 DDAH1 (ENSPMRG00000008019) Argentine black and white tegu MODERN SPECIES 31 DNAJB4 (ENSSMRG00000020197) ENSSMRG00000020198 GIPC2 (ENSSMRG00000020199) PTGFR (ENSSMRG00000020200) ##10 ENSSMRG00000020201 ADGRL4 (ENSSMRG00000020202) #14 ENSSMRG00000020203 ENSSMRG00000020205 ADGRL2 (ENSSMRG00000020209) ##15 TTLL7 (ENSSMRG00000020211) #16 ENSSMRG00000020212 #17 SAMD13 (ENSSMRG00000020213) #18 ENSSMRG00000020214 ENSSMRG00000020215 #19 DNASE2B (ENSSMRG00000020396) #20 RPF1 (ENSSMRG00000020397) #22 ENSSMRG00000020398 SPATA1 (ENSSMRG00000020399) #23 ENSSMRG00000020400 #24 ENSSMRG00000020401 #24 tuatara MODERN SPECIES 1845 ENSSPUG00000016976 TTLL7 (ENSSPUG00000016955) #16 ENSSPUG00000016912 #17 ENSSPUG00000016893 SAMD13 (ENSSPUG00000016886) #18 ENSSPUG00000016791 #19 RPF1 (ENSSPUG00000016759) #22 ENSSPUG00000016754 SPATA1 (ENSSPUG00000016732) #23 CTBS (ENSSPUG00000016662) #24 SSX2IP (ENSSPUG00000016641) #27 LPAR3 (ENSSPUG00000016634) #29 MCOLN2 (ENSSPUG00000016595) #30 MCOLN3 (ENSSPUG00000016549) ##30 DNAI3 (ENSSPUG00000016535) SYDE2 (ENSSPUG00000016501) C1orf52 (ENSSPUG00000016490) ENSSPUG00000016484 DDAH1 (ENSSPUG00000016477) ENSSPUG00000016472 CCN1 (ENSSPUG00000016465) ENSSPUG00000016457 Archelosauria ANCESTRAL SPECIES 9 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163581 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Archosauria ANCESTRAL SPECIES 11 ENSGT00940000156826 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00940000163581 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Aves ANCESTRAL SPECIES 7 ENSGT00940000160043 ENSGT00940000156826 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Neognathae ANCESTRAL SPECIES 8 ENSGT00940000156826 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00960000189609 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Galloanserae ANCESTRAL SPECIES 8 ENSGT00940000160043 ENSGT00940000156826 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00960000189609 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Anatidae ANCESTRAL SPECIES 5 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00960000189609 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Duck MODERN SPECIES 26 DNAJB4 (ENSAPLG00000005935) ENSAPLG00000030011 GIPC2 (ENSAPLG00000005690) PTGFR (ENSAPLG00000005684) ##10 ENSAPLG00000003957 #13 ADGRL4 (ENSAPLG00000003585) #14 ENSAPLG00000025178 ENSAPLG00000024586 ADGRL2 (ENSAPLG00000004072) ##15 TTLL7 (ENSAPLG00000016057) #16 ENSAPLG00000016236 #17 ENSAPLG00000029314 SAMD13 (ENSAPLG00000016342) #18 DNASE2B (ENSAPLG00000026479) #20 ENSAPLG00000016344 #19 RPF1 (ENSAPLG00000016382) #22 ENSAPLG00000000630 SPATA1 (ENSAPLG00000016401) #23 CTBS (ENSAPLG00000016415) #24 ENSAPLG00000021250 #26 ENSAPLG00000016418 #26 SSX2IP (ENSAPLG00000002969) #27 LPAR3 (ENSAPLG00000003113) #29 MCOLN2 (ENSAPLG00000003123) #30 MCOLN3 (ENSAPLG00000003304) ##30 DNAI3 (ENSAPLG00000003460) SYDE2 (ENSAPLG00000003510) C1orf52 (ENSAPLG00000029539) ENSAPLG00000003517 DDAH1 (ENSAPLG00000017443) CCN1 (ENSAPLG00000003558) Pink-footed goose MODERN SPECIES 1 NEXN (ENSABRG00000018218) FUBP1 (ENSABRG00000018222) DNAJB4 (ENSABRG00000018232) ENSABRG00000018235 ENSABRG00000018241 PTGFR (ENSABRG00000018247) ##10 ENSABRG00000018257 #13 ADGRL4 (ENSABRG00000018306) #14 ENSABRG00000018347 ADGRL2 (ENSABRG00000018355) ##15 TTLL7 (ENSABRG00000018431) #16 ENSABRG00000018455 #17 SAMD13 (ENSABRG00000018468) #18 ENSABRG00000018473 #19 DNASE2B (ENSABRG00000018484) #20 RPF1 (ENSABRG00000018488) #22 ENSABRG00000018492 ENSABRG00000018495 #23 CTBS (ENSABRG00000018498) #24 ENSABRG00000018506 #26 ENSABRG00000018543 #26 SSX2IP (ENSABRG00000018577) #27 LPAR3 (ENSABRG00000018582) #29 MCOLN2 (ENSABRG00000018585) #30 MCOLN3 (ENSABRG00000018595) ##30 DNAI3 (ENSABRG00000018607) SYDE2 (ENSABRG00000018635) C1orf52 (ENSABRG00000018640) ENSABRG00000018642 DDAH1 (ENSABRG00000018643) CCN1 (ENSABRG00000018644) Phasianidae ANCESTRAL SPECIES 7 ENSGT00940000160043 ENSGT00940000156826 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00960000189609 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Phasianidae_b ANCESTRAL SPECIES 7 ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00960000189609 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00940000165410 ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 Chicken MODERN SPECIES 37 FUBP1 (ENSGALG00010022228) DNAJB4 (ENSGALG00010022186) ENSGALG00010022175 GIPC2 (ENSGALG00010022172) PTGFR (ENSGALG00010020693) ##10 VTG1 (ENSGALG00010021630) #13 ADGRL4 (ENSGALG00010021613) #14 ENSGALG00010024215 ADGRL2 (ENSGALG00010021575) ##15 TTLL7 (ENSGALG00010021080) #16 PRKACB (ENSGALG00010021072) #17 ENSGALG00010020749 THAP10 (ENSGALG00010020742) #18 DNASE2B (ENSGALG00010024505) #20 ENSGALG00010020715 #19 RPF1 (ENSGALG00010020957) #22 GNG5 (ENSGALG00010020952) CTBS (ENSGALG00010020946) #24 VTG3 (ENSGALG00010020897) #26 ENSGALG00010020884 VTG2 (ENSGALG00010020856) #26 SSX2IP (ENSGALG00010021533) #27 LPAR3 (ENSGALG00010020840) #29 MCOLN2 (ENSGALG00010020811) #30 MCOLN3 (ENSGALG00010020776) ##30 DNAI3 (ENSGALG00010020758) SYDE2 (ENSGALG00010020753) C1orf52 (ENSGALG00010020686) BCL10 (ENSGALG00010020681) DDAH1 (ENSGALG00010024494) CYR61 (ENSGALG00010020677) Turkey MODERN SPECIES 1 ENSMGAG00000012152 ENSMGAG00000012149 ENSMGAG00000012156 ENSMGAG00000012180 ENSMGAG00000012203 ENSMGAG00000012201 ENSMGAG00000012185 ENSMGAG00000021962 ADGRL2 (ENSMGAG00000009284) ##15 TTLL7 (ENSMGAG00000009259) #16 ENSMGAG00000006417 #17 SAMD13 (ENSMGAG00000016531) #18 ENSMGAG00000020035 DNASE2B (ENSMGAG00000009219) #20 ENSMGAG00000009240 #19 RPF1 (ENSMGAG00000009207) #22 ENSMGAG00000022687 ENSMGAG00000009196 #23 CTBS (ENSMGAG00000009191) #24 ENSMGAG00000019075 #26 ENSMGAG00000009088 #26 SSX2IP (ENSMGAG00000009038) #27 LPAR3 (ENSMGAG00000009028) #29 MCOLN2 (ENSMGAG00000009009) #30 MCOLN3 (ENSMGAG00000008983) ##30 DNAI3 (ENSMGAG00000008955) SYDE2 (ENSMGAG00000008940) C1orf52 (ENSMGAG00000019997) ENSMGAG00000008930 DDAH1 (ENSMGAG00000008919) CCN1 (ENSMGAG00000008895) Japanese quail MODERN SPECIES 26 FUBP1 (ENSCJPG00005008428) DNAJB4 (ENSCJPG00005008417) ENSCJPG00005008416 PTGFR (ENSCJPG00005008414) ##10 ENSCJPG00005008413 #13 ADGRL4 (ENSCJPG00005008404) #14 ENSCJPG00005008389 ENSCJPG00005008381 ADGRL2 (ENSCJPG00005008376) ##15 TTLL7 (ENSCJPG00005008366) #16 ENSCJPG00005008353 #17 SAMD13 (ENSCJPG00005008347) #18 ENSCJPG00005008346 DNASE2B (ENSCJPG00005008343) #20 ENSCJPG00005008342 #19 RPF1 (ENSCJPG00005008339) #22 ENSCJPG00005008338 SPATA1 (ENSCJPG00005008337) #23 CTBS (ENSCJPG00005008336) #24 ENSCJPG00005008334 #26 ENSCJPG00005008333 #26 SSX2IP (ENSCJPG00005008332) #27 LPAR3 (ENSCJPG00005008331) #29 MCOLN2 (ENSCJPG00005008325) #30 MCOLN3 (ENSCJPG00005008324) ##30 DNAI3 (ENSCJPG00005008321) SYDE2 (ENSCJPG00005008320) C1orf52 (ENSCJPG00005008317) ENSCJPG00005008315 DDAH1 (ENSCJPG00005008314) CCN1 (ENSCJPG00005008310) Neognathae_b ANCESTRAL SPECIES 10 ENSGT00940000156826 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00960000189609 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Neognathae_c ANCESTRAL SPECIES 7 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C.f ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Kakapo MODERN SPECIES 25 ENSSHBG00005014512 NEXN (ENSSHBG00005014263) FUBP1 (ENSSHBG00005014194) DNAJB4 (ENSSHBG00005014177) GIPC2 (ENSSHBG00005014165) PTGFR (ENSSHBG00005014158) ##10 ENSSHBG00005014080 #13 ENSSHBG00005014051 ADGRL4 (ENSSHBG00005014044) #14 ADGRL2 (ENSSHBG00005014012) ##15 TTLL7 (ENSSHBG00005011997) #16 ENSSHBG00005011770 #17 SAMD13 (ENSSHBG00005011750) #18 ENSSHBG00005011396 #19 DNASE2B (ENSSHBG00005011317) #20 RPF1 (ENSSHBG00005011295) #22 SPATA1 (ENSSHBG00005011245) #23 CTBS (ENSSHBG00005011197) #24 ENSSHBG00005011058 #26 ENSSHBG00005010730 #26 SSX2IP (ENSSHBG00005010615) #27 LPAR3 (ENSSHBG00005010585) #29 MCOLN2 (ENSSHBG00005010531) #30 MCOLN3 (ENSSHBG00005010500) ##30 DNAI3 (ENSSHBG00005010404) NRROS (ENSSHBG00005010360) FBXO45 (ENSSHBG00005010348) WDR53 (ENSSHBG00005010326) RNF168 (ENSSHBG00005000535) UBXN7 (ENSSHBG00005000533) TM4SF19 (ENSSHBG00005019776) Golden eagle MODERN SPECIES 3 MIGA1 (ENSACCG00020004183) NEXN (ENSACCG00020004141) FUBP1 (ENSACCG00020004073) DNAJB4 (ENSACCG00020004058) GIPC2 (ENSACCG00020004046) PTGFR (ENSACCG00020004040) ##10 ENSACCG00020004023 #13 ADGRL4 (ENSACCG00020003993) #14 ADGRL2 (ENSACCG00020003921) ##15 TTLL7 (ENSACCG00020003837) #16 ENSACCG00020003796 #17 ENSACCG00020003763 SAMD13 (ENSACCG00020003750) #18 ENSACCG00020003719 #19 DNASE2B (ENSACCG00020003684) #20 RPF1 (ENSACCG00020003670) #22 ENSACCG00020003655 SPATA1 (ENSACCG00020003637) #23 CTBS (ENSACCG00020003598) #24 ENSACCG00020003527 #26 ENSACCG00020003402 #26 SSX2IP (ENSACCG00020003322) #27 LPAR3 (ENSACCG00020003306) #29 MCOLN2 (ENSACCG00020003279) #30 MCOLN3 (ENSACCG00020003253) ##30 DNAI3 (ENSACCG00020003229) SYDE2 (ENSACCG00020003214) C1orf52 (ENSACCG00020003204) ENSACCG00020003194 DDAH1 (ENSACCG00020003181) CCN1 (ENSACCG00020003153) Passeriformes ANCESTRAL SPECIES 8 ENSGT00940000156826 ENSGT00960000189519 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00960000189609 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Great tit MODERN SPECIES 28 NEXN (ENSPMJG00000019470) FUBP1 (ENSPMJG00000019469) DNAJB4 (ENSPMJG00000019468) ENSPMJG00000019467 GIPC2 (ENSPMJG00000019466) PTGFR (ENSPMJG00000019465) ##10 ENSPMJG00000019464 #13 ADGRL4 (ENSPMJG00000019463) #14 ADGRL2 (ENSPMJG00000019455) ##15 TTLL7 (ENSPMJG00000019452) #16 ENSPMJG00000019451 #17 ENSPMJG00000019450 SAMD13 (ENSPMJG00000019449) #18 ENSPMJG00000019448 #19 DNASE2B (ENSPMJG00000019447) #20 RPF1 (ENSPMJG00000019446) #22 ENSPMJG00000019445 CTBS (ENSPMJG00000019443) #24 ENSPMJG00000019442 #26 ENSPMJG00000019441 #26 SSX2IP (ENSPMJG00000019440) #27 LPAR3 (ENSPMJG00000019438) #29 MCOLN2 (ENSPMJG00000019437) #30 MCOLN3 (ENSPMJG00000019436) ##30 DNAI3 (ENSPMJG00000019435) SYDE2 (ENSPMJG00000019434) C1orf52 (ENSPMJG00000019433) ENSPMJG00000019432 DDAH1 (ENSPMJG00000019431) CCN1 (ENSPMJG00000019429) ZNHIT6 (ENSPMJG00000019428) Passeriformes_d ANCESTRAL SPECIES 9 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00960000189609 ENSGT00940000156348.C ##15 ENSGT01030000235287 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Flycatcher MODERN SPECIES 27 MIGA1 (ENSFALG00000005734) NEXN (ENSFALG00000005748) FUBP1 (ENSFALG00000005768) DNAJB4 (ENSFALG00000028100) PTGFR (ENSFALG00000024097) ##10 ENSFALG00000005842 #13 ADGRL4 (ENSFALG00000005951) #14 ENSFALG00000029030 ADGRL2 (ENSFALG00000005968) ##15 ENSFALG00000024886 TTLL7 (ENSFALG00000005994) #16 ENSFALG00000026962 #17 DNASE2B (ENSFALG00000028878) #20 ENSFALG00000028997 ENSFALG00000006014 #19 RPF1 (ENSFALG00000026271) #22 ENSFALG00000025344 SPATA1 (ENSFALG00000006040) #23 CTBS (ENSFALG00000006047) #24 ENSFALG00000006054 #26 ENSFALG00000006095 #26 SSX2IP (ENSFALG00000006170) #27 LPAR3 (ENSFALG00000006179) #29 MCOLN2 (ENSFALG00000006182) #30 MCOLN3 (ENSFALG00000006184) ##30 DNAI3 (ENSFALG00000006192) SYDE2 (ENSFALG00000024732) C1orf52 (ENSFALG00000006212) ENSFALG00000006213 DDAH1 (ENSFALG00000006215) CCN1 (ENSFALG00000006221) Passeriformes_g ANCESTRAL SPECIES 10 ENSGT00390000005307 ENSGT00940000157311 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Medium ground finch MODERN SPECIES 39 TTLL7 (ENSGFOG00000004463) #16 ENSGFOG00000004525 #17 DNASE2B (ENSGFOG00000004566) #20 ENSGFOG00000004605 #19 RPF1 (ENSGFOG00000005079) #22 ENSGFOG00000005288 SPATA1 (ENSGFOG00000005293) #23 CTBS (ENSGFOG00000005314) #24 ENSGFOG00000005334 #26 SSX2IP (ENSGFOG00000005417) #27 LPAR3 (ENSGFOG00000005436) #29 MCOLN2 (ENSGFOG00000005488) #30 MCOLN3 (ENSGFOG00000005942) ##30 DNAI3 (ENSGFOG00000005954) SYDE2 (ENSGFOG00000005969) ENSGFOG00000005977 CCN1 (ENSGFOG00000005984) ZNHIT6 (ENSGFOG00000006014) ENSGFOG00000006039 SH3GLB1 (ENSGFOG00000006050) Passeroidea ANCESTRAL SPECIES 9 ENSGT00390000008565.b ENSGT00730000111176 ENSGT00940000160043 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Zebra finch MODERN SPECIES 30 USP33 (ENSTGUG00000006953) MIGA1 (ENSTGUG00000006940) NEXN (ENSTGUG00000006920) FUBP1 (ENSTGUG00000006841) DNAJB4 (ENSTGUG00000006835) GIPC2 (ENSTGUG00000023052) PTGFR (ENSTGUG00000006816) ##10 ENSTGUG00000006778 #13 ADGRL4 (ENSTGUG00000006751) #14 ADGRL2 (ENSTGUG00000006679) ##15 TTLL7 (ENSTGUG00000006665) #16 ENSTGUG00000006643 #17 DNASE2B (ENSTGUG00000006605) #20 ENSTGUG00000025734 ENSTGUG00000006616 #19 RPF1 (ENSTGUG00000006591) #22 GNG5 (ENSTGUG00000021033) SPATA1 (ENSTGUG00000028467) #23 CTBS (ENSTGUG00000006581) #24 ENSTGUG00000029760 #26 ENSTGUG00000006544 #26 SSX2IP (ENSTGUG00000006524) #27 LPAR3 (ENSTGUG00000006518) #29 MCOLN2 (ENSTGUG00000006506) #30 MCOLN3 (ENSTGUG00000006482) ##30 DNAI3 (ENSTGUG00000006462) SYDE2 (ENSTGUG00000006457) C1orf52 (ENSTGUG00000025081) ENSTGUG00000019476 DDAH1 (ENSTGUG00000027174) CCN1 (ENSTGUG00000006428) Common canary MODERN SPECIES 9 USP33 (ENSSCAG00000014458) MIGA1 (ENSSCAG00000014424) NEXN (ENSSCAG00000014397) FUBP1 (ENSSCAG00000014379) DNAJB4 (ENSSCAG00000014373) PTGFR (ENSSCAG00000014364) ##10 ENSSCAG00000014340 #13 ADGRL4 (ENSSCAG00000014322) #14 ADGRL2 (ENSSCAG00000014298) ##15 TTLL7 (ENSSCAG00000014266) #16 ENSSCAG00000014250 #17 ENSSCAG00000014239 SAMD13 (ENSSCAG00000014234) #18 DNASE2B (ENSSCAG00000014229) #20 ENSSCAG00000014221 #19 RPF1 (ENSSCAG00000014213) #22 ENSSCAG00000014208 SPATA1 (ENSSCAG00000014197) #23 CTBS (ENSSCAG00000014189) #24 ENSSCAG00000014185 #26 ENSSCAG00000014174 #26 SSX2IP (ENSSCAG00000014169) #27 LPAR3 (ENSSCAG00000014166) #29 MCOLN2 (ENSSCAG00000014159) #30 MCOLN3 (ENSSCAG00000014142) ##30 ENSSCAG00000014135 SYDE2 (ENSSCAG00000014128) ENSSCAG00000014119 DDAH1 (ENSSCAG00000014109) CCN1 (ENSSCAG00000014106) ZNHIT6 (ENSSCAG00000014098) African ostrich MODERN SPECIES 546 TTLL7 (ENSSCUG00000006307) #16 ENSSCUG00000006302 ENSSCUG00000006298 #17 ENSSCUG00000006293 SAMD13 (ENSSCUG00000006289) #18 ENSSCUG00000006285 #19 DNASE2B (ENSSCUG00000006283) #20 RPF1 (ENSSCUG00000006275) #22 ENSSCUG00000006272 SPATA1 (ENSSCUG00000006268) #23 CTBS (ENSSCUG00000006264) #24 ENSSCUG00000006256 ENSSCUG00000006248 #26 SSX2IP (ENSSCUG00000006242) #27 LPAR3 (ENSSCUG00000006241) #29 MCOLN3 (ENSSCUG00000006237) ##30 DNAI3 (ENSSCUG00000006232) SYDE2 (ENSSCUG00000006228) ENSSCUG00000006225 DDAH1 (ENSSCUG00000006224) CCN1 (ENSSCUG00000006221) ZNHIT6 (ENSSCUG00000006216) ENSSCUG00000006212 Australian saltwater crocodile MODERN SPECIES 28 KHSRP (ENSCPRG00005017210) DNAJB4 (ENSCPRG00005017205) ENSCPRG00005017203 PTGFR (ENSCPRG00005017199) ##10 ENSCPRG00005017197 ENSCPRG00005017191 #13 ADGRL4 (ENSCPRG00005017183) #14 ADGRL2 (ENSCPRG00005017162) ##15 ENSCPRG00005017152 TTLL7 (ENSCPRG00005017130) #16 ENSCPRG00005017123 #17 ENSCPRG00005017121 SAMD13 (ENSCPRG00005017120) #18 ENSCPRG00005017105 #19 DNASE2B (ENSCPRG00005017097) #20 RPF1 (ENSCPRG00005017093) #22 ENSCPRG00005017090 SPATA1 (ENSCPRG00005017072) #23 CTBS (ENSCPRG00005017066) #24 ENSCPRG00005017056 #26 ENSCPRG00005017034 #26 SSX2IP (ENSCPRG00005017026) #27 LPAR3 (ENSCPRG00005017021) #29 MCOLN2 (ENSCPRG00005017018) #30 MCOLN3 (ENSCPRG00005016998) ##30 DNAI3 (ENSCPRG00005016988) SYDE2 (ENSCPRG00005016985) C1orf52 (ENSCPRG00005016982) ENSCPRG00005016978 DDAH1 (ENSCPRG00005016967) CCN1 (ENSCPRG00005016962) Cryptodira ANCESTRAL SPECIES 8 ENSGT01030000234559.a.b ##10 ENSGT00940000163581 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT00940000163788 ENSGT00530000063936.b #18 ENSGT00940000153229.B.f #19 ENSGT00390000002634.b #20 ENSGT00940000153229.B.e #19 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Testudinoidea ANCESTRAL SPECIES 5 ENSGT00940000163581 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT01030000235381.a ENSGT00530000063936.b #18 ENSGT00940000153229.B.f #19 ENSGT01030000235381.b ENSGT00390000002634.b #20 ENSGT00940000153229.B.e #19 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Emydidae ANCESTRAL SPECIES 22 ENSGT01030000234559.a.b ##10 ENSGT00940000163581 ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01030000235381.a ENSGT00530000063936.b #18 ENSGT00940000153229.B.f #19 ENSGT01030000235381.b ENSGT00390000002634.b #20 ENSGT00940000153229.B.e #19 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 97 ENSTMTG00000012931 ENSTMTG00000012676 ENSTMTG00000012559 #13 ENSTMTG00000012517 #14 ENSTMTG00000012498 ENSTMTG00000012448 ##15 ENSTMTG00000012421 ENSTMTG00000012364 #16 ENSTMTG00000012342 #17 ENSTMTG00000012326 ENSTMTG00000012310 #18 ENSTMTG00000012291 #19 ENSTMTG00000012281 ENSTMTG00000012268 ENSTMTG00000012240 #20 ENSTMTG00000012211 #22 ENSTMTG00000012197 ENSTMTG00000012168 #23 ENSTMTG00000012158 #24 ENSTMTG00000011969 #26 ENSTMTG00000011870 #26 ENSTMTG00000011816 #27 ENSTMTG00000011803 #29 ENSTMTG00000011777 #30 ENSTMTG00000011742 ##30 ENSTMTG00000011718 ENSTMTG00000011702 ENSTMTG00000011694 ENSTMTG00000011688 ENSTMTG00000011678 ENSTMTG00000011673 Three-toed box turtle MODERN SPECIES 98 ENSTMTG00000007971 ##10 ENSTMTG00000007951 ENSTMTG00000007927 ENSTMTG00000007853 #13 ENSTMTG00000009648 #14 ENSTMTG00000009548 ##15 ENSTMTG00000009501 ENSTMTG00000009456 #16 ENSTMTG00000009411 #17 ENSTMTG00000009390 ENSTMTG00000009379 #18 ENSTMTG00000009263 #19 ENSTMTG00000009245 ENSTMTG00000009229 ENSTMTG00000009218 #20 ENSTMTG00000009199 #22 ENSTMTG00000009188 ENSTMTG00000009164 #23 ENSTMTG00000009154 #24 ENSTMTG00000008997 #26 ENSTMTG00000008502 #26 ENSTMTG00000008410 #27 ENSTMTG00000008389 #29 ENSTMTG00000008382 ENSTMTG00000008334 #30 ENSTMTG00000008305 ##30 ENSTMTG00000008283 ENSTMTG00000008273 ENSTMTG00000008260 ENSTMTG00000008249 ENSTMTG00000008240 painted turtle MODERN SPECIES 17 SOAT1 (ENSCPBG00000025847) ENSCPBG00000025855 ENSCPBG00000025866 ODF2L (ENSCPBG00000025869) CLCA2 (ENSCPBG00000025872) ENSCPBG00000025875 ENSCPBG00000025883 ENSCPBG00000025899 ENSCPBG00000025902 #17 SAMD13 (ENSCPBG00000025904) #18 ENSCPBG00000025905 ENSCPBG00000025906 ENSCPBG00000025907 #19 DNASE2B (ENSCPBG00000025908) #20 ENSCPBG00000025910 #19 RPF1 (ENSCPBG00000025911) #22 ENSCPBG00000025912 SPATA1 (ENSCPBG00000025913) #23 CTBS (ENSCPBG00000025914) #24 ENSCPBG00000025915 #26 ENSCPBG00000025916 #26 SSX2IP (ENSCPBG00000000257) #27 LPAR3 (ENSCPBG00000000291) #29 MCOLN2 (ENSCPBG00000000312) #30 MCOLN3 (ENSCPBG00000000550) ##30 DNAI3 (ENSCPBG00000000595) SYDE2 (ENSCPBG00000000651) C1orf52 (ENSCPBG00000000673) ENSCPBG00000000682 DDAH1 (ENSCPBG00000000692) CCN1 (ENSCPBG00000000725) Testudinidae ANCESTRAL SPECIES 41 ENSGT00940000163581.a ENSGT00530000064273.a.a #13 ENSGT00940000158252 #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000166568 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT01040000241459 ENSGT01030000235381.a ENSGT00530000063936.b #18 ENSGT00940000153229.B.f #19 ENSGT01030000235381.b ENSGT00390000002634.b #20 ENSGT00940000153229.B.e #19 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.c #26 ENSGT00530000064273.a.b.d #26 ENSGT00390000007688 #27 ENSGT01050000244941.B.d #29 ENSGT00950000183036.a.b #30 ENSGT00950000183036.a.a ##30 ENSGT00940000156924 ENSGT01030000234635.a.a.a.a ENSGT00390000017398 ENSGT00940000167202 ENSGT00940000157892 ENSGT00940000155151.b Goode s thornscrub tortoise MODERN SPECIES 22 PTGFR (ENSGEVG00005014980) ##10 ENSGEVG00005014949 ENSGEVG00005014689 #13 ADGRL4 (ENSGEVG00005014535) #14 ENSGEVG00005014497 ADGRL2 (ENSGEVG00005011909) ##15 ENSGEVG00005011361 TTLL7 (ENSGEVG00005011254) #16 ENSGEVG00005011189 #17 ENSGEVG00005011138 SAMD13 (ENSGEVG00005011088) #18 ENSGEVG00005011057 #19 ENSGEVG00005011038 DNASE2B (ENSGEVG00005011013) #20 ENSGEVG00005010973 #19 RPF1 (ENSGEVG00005010919) #22 ENSGEVG00005010887 SPATA1 (ENSGEVG00005010819) #23 CTBS (ENSGEVG00005010771) #24 ENSGEVG00005010203 #26 ENSGEVG00005009529 #26 SSX2IP (ENSGEVG00005009418) #27 LPAR3 (ENSGEVG00005009383) #29 MCOLN2 (ENSGEVG00005009299) #30 MCOLN3 (ENSGEVG00005009204) ##30 DNAI3 (ENSGEVG00005009007) SYDE2 (ENSGEVG00005008926) C1orf52 (ENSGEVG00005008893) ENSGEVG00005008877 DDAH1 (ENSGEVG00005008857) CCN1 (ENSGEVG00005008830) Abingdon island giant tortoise MODERN SPECIES 2065 ENSCABG00000001031 TTLL7 (ENSCABG00000001027) #16 ENSCABG00000001025 ENSCABG00000001010 #17 ENSCABG00000001006 SAMD13 (ENSCABG00000001003) #18 ENSCABG00000000728 #19 ENSCABG00000000722 DNASE2B (ENSCABG00000000718) #20 ENSCABG00000000646 #19 RPF1 (ENSCABG00000000632) #22 ENSCABG00000000627 SPATA1 (ENSCABG00000000602) #23 CTBS (ENSCABG00000000594) #24 ENSCABG00000000569 #26 ENSCABG00000000480 #26 SSX2IP (ENSCABG00000000451) #27 LPAR3 (ENSCABG00000000444) #29 MCOLN2 (ENSCABG00000000407) #30 MCOLN3 (ENSCABG00000000330) ##30 DNAI3 (ENSCABG00000000313) SYDE2 (ENSCABG00000000305) C1orf52 (ENSCABG00000000299) ENSCABG00000000289 DDAH1 (ENSCABG00000000262) Chinese turtle MODERN SPECIES 867 ENSPSIG00000001804 ENSPSIG00000007555 TTLL7 (ENSPSIG00000007544) #16 ENSPSIG00000006903 #17 ENSPSIG00000006868 SAMD13 (ENSPSIG00000006863) #18 ENSPSIG00000006858 #19 DNASE2B (ENSPSIG00000006801) #20 ENSPSIG00000017540 #19 RPF1 (ENSPSIG00000017437) #22 SPATA1 (ENSPSIG00000017323) #23 CTBS (ENSPSIG00000017282) #24 ENSPSIG00000017211 #26 ENSPSIG00000017070 #26 SSX2IP (ENSPSIG00000016706) #27 LPAR3 (ENSPSIG00000016421) #29 MCOLN2 (ENSPSIG00000015749) #30 MCOLN3 (ENSPSIG00000015503) ##30 DNAI3 (ENSPSIG00000014927) SYDE2 (ENSPSIG00000014791) C1orf52 (ENSPSIG00000014776) ENSPSIG00000014531 DDAH1 (ENSPSIG00000014329) CCN1 (ENSPSIG00000014026) ZNHIT6 (ENSPSIG00000013856) Anura ANCESTRAL SPECIES 17 ENSGT00730000111176 ENSGT00940000156051 ENSGT00940000159428 ENSGT00940000156826 ENSGT00390000003420.a.b ENSGT01030000234559.a.b ##10 ENSGT00530000064273.a.a #13 ENSGT00940000158252.c #14 ENSGT01030000235287 ENSGT00940000156348.C ##15 ENSGT00940000159078 #16 ENSGT00940000163111.a.b.b #17 ENSGT00530000063936.b #18 ENSGT00940000153229.B #19 ENSGT00390000002634.b #20 ENSGT00940000153231.B #22 ENSGT01100000263525.a.b.b ENSGT00390000003298 #23 ENSGT00390000012891 #24 ENSGT00530000064273.a.b.e #26 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 11 ENSLLEG00000022206 #13 PTGFR (ENSLLEG00000022172) ##10 ENSLLEG00000022156 GIPC2 (ENSLLEG00000022115) DNAJB4 (ENSLLEG00000022046) ENSLLEG00000020933 NEXN (ENSLLEG00000019266) MIGA1 (ENSLLEG00000019097) USP33 (ENSLLEG00000018773) ZZZ3 (ENSLLEG00000018432) AK5 (ENSLLEG00000018222) ENSLLEG00000018174 PIGK (ENSLLEG00000029426) ENSLLEG00000029387 ST6GALNAC5 (ENSLLEG00000029357) ENSLLEG00000029346 #22 ST6GALNAC3 (ENSLLEG00000029317) MSH4 (ENSLLEG00000029274) RABGGTB (ENSLLEG00000029213) ACADM (ENSLLEG00000029026) SLC44A5 (ENSLLEG00000028564) LHX8 (ENSLLEG00000028451) ENSLLEG00000028427 TYW3 (ENSLLEG00000028400) CRYZ (ENSLLEG00000028367) ENSLLEG00000028349 ENSLLEG00000027987 TNNI3K (ENSLLEG00000027700) ENSLLEG00000027582 ENSLLEG00000027544 ENSLLEG00000027523 Leishan spiny toad MODERN SPECIES 11 MPL (ENSLLEG00000025946) TIE1 (ENSLLEG00000024464) EBNA1BP2 (ENSLLEG00000024080) ENSLLEG00000024008 PIF1 (ENSLLEG00000023533) USP24 (ENSLLEG00000022661) C1orf210 (ENSLLEG00000022590) TMEM125 (ENSLLEG00000022550) CFAP57 (ENSLLEG00000022224) ENSLLEG00000022189 ENSLLEG00000022152 ENSLLEG00000022075 ENSLLEG00000022048 PLPP3 (ENSLLEG00000021924) PRKAA2 (ENSLLEG00000021761) ENSLLEG00000021633 #22 ENSLLEG00000021567 ENSLLEG00000021548 SPATA1 (ENSLLEG00000021464) #23 CTBS (ENSLLEG00000020755) #24 ENSLLEG00000020695 ENSLLEG00000020679 ENSLLEG00000020664 ENSLLEG00000020248 #26 ENSLLEG00000020218 SSX2IP (ENSLLEG00000020104) #27 ENSLLEG00000019640 #28 ENSLLEG00000019585 SYDE2 (ENSLLEG00000019516) DNAI3 (ENSLLEG00000018794) ENSLLEG00000018336 Frog MODERN SPECIES 4 gipc2 (ENSXETG00000013148) ENSXETG00000041803 ptgfr (ENSXETG00000030932) ##10 ENSXETG00000045528 adgrl4 (ENSXETG00000039849) #14 ENSXETG00000043288 ENSXETG00000039769 adgrl2 (ENSXETG00000031189) ##15 ENSXETG00000039535 ttll7 (ENSXETG00000008651) #16 prkacb (ENSXETG00000008649) #17 samd13 (ENSXETG00000025078) #18 ENSXETG00000043636 uox (ENSXETG00000008648) #19 dnase2b (ENSXETG00000025076) #20 rpf1 (ENSXETG00000008642) #22 spata1 (ENSXETG00000008645) #23 gng5 (ENSXETG00000040021) #24 ctbs (ENSXETG00000008640) #24 vtga2 (ENSXETG00000025072) #26 ssx2ip (ENSXETG00000008635) #27 lpar3 (ENSXETG00000008631) #29 mcoln3 (ENSXETG00000008633) ##30 dnai3 (ENSXETG00000008630) syde2 (ENSXETG00000008629) bcl10 (ENSXETG00000003096) ddah1 (ENSXETG00000047913) ccn1 (ENSXETG00000003094) znhit6 (ENSXETG00000037309) col24a1 (ENSXETG00000003092) ENSXETG00000044401 Coelacanth MODERN SPECIES 406 TTLL7 (ENSLACG00000010892) #16 ASF1A (ENSLACG00000012211) prkacbb (ENSLACG00000012597) #17 uox (ENSLACG00000013884) #19 RPF1 (ENSLACG00000014263) #22 SPATA1 (ENSLACG00000014462) #23 CTBS (ENSLACG00000014703) #24 ENSLACG00000014924 #26 ENSLACG00000015239 #26 SSX2IP (ENSLACG00000015496) #27 ENSLACG00000015737 #28 MCOLN2 (ENSLACG00000016212) #30 MCOLN3 (ENSLACG00000016339) ##30 DNAI3 (ENSLACG00000016526) SYDE2 (ENSLACG00000016777) ENSLACG00000016954 ENSLACG00000017073 DDAH1 (ENSLACG00000017127) ENSLACG00000017143 CCN1 (ENSLACG00000017295) Elephant shark MODERN SPECIES 1492 nexn (ENSCMIG00000009457) fubp1 (ENSCMIG00000009439) dnajb4 (ENSCMIG00000009420) gipc2 (ENSCMIG00000009416) ptgfr (ENSCMIG00000009413) ##10 ifi44f1 (ENSCMIG00000009410) ENSCMIG00000009370 #26 ADGRL4 (ENSCMIG00000009341) #14 ADGRL2 (ENSCMIG00000008996) ##15 ttll7 (ENSCMIG00000008882) #16 ASF1A (ENSCMIG00000008871) prkacbb (ENSCMIG00000008615) #17 ENSCMIG00000008525 #18 uox (ENSCMIG00000008523) #19 DNASE2B (ENSCMIG00000008519) #20 rpf1 (ENSCMIG00000008516) #22 ENSCMIG00000008513 ENSCMIG00000008509 #23 ctbs (ENSCMIG00000008497) #24 ENSCMIG00000008446 #26 ssx2ipa (ENSCMIG00000008382) #27 ENSCMIG00000008366 #28 lpar3 (ENSCMIG00000008360) #29 mcoln2 (ENSCMIG00000008343) #30 MCOLN3 (ENSCMIG00000008299) ##30 DNAI3 (ENSCMIG00000008279) SYDE2 (ENSCMIG00000008277) zgc:65873 (ENSCMIG00000008275) DDAH1 (ENSCMIG00000008274) ccn1 (ENSCMIG00000008269) ENSCMIG00000008267 Cyclostomata ANCESTRAL SPECIES ENSGT00940000153231.B #22 Hagfish MODERN SPECIES 590 snrnp200 (ENSEBUG00000016524) ENSEBUG00000014289 adck5 (ENSEBUG00000000402) WDR59 (ENSEBUG00000003703) gnao1b (ENSEBUG00000003692) ENSEBUG00000003689 ENSEBUG00000009827 ENSEBUG00000009728 ENSEBUG00000002504 ENSEBUG00000006320 ENSEBUG00000012549 ENSEBUG00000015072 ENSEBUG00000001940 ENSEBUG00000007279 polr2eb (ENSEBUG00000010159) rpf1 (ENSEBUG00000010623) #22 ENSEBUG00000008245 ENSEBUG00000012890 snai1a (ENSEBUG00000011515) ube2v1 (ENSEBUG00000004508) MVD (ENSEBUG00000009160) ENSEBUG00000001997 ENSEBUG00000008437 ENSEBUG00000015016 ENSEBUG00000005513 npepl1 (ENSEBUG00000008405) ptpn1 (ENSEBUG00000008832) ENSEBUG00000006378 ENSEBUG00000001398 Ciona ANCESTRAL SPECIES 444 ENSGT00940000173389 ENSGT00530000064862.a.a ENSGT00940000153231.B #22 Ciona intestinalis MODERN SPECIES 12 ENSCING00000007502 ENSCING00000007504 ENSCING00000021350 ENSCING00000007507 ENSCING00000013179 zf(c2h2)-43 (ENSCING00000007508) ENSCING00000019889 ENSCING00000013178 ENSCING00000007509 ENSCING00000025119 ENSCING00000021949 ENSCING00000020540 ENSCING00000007511 ENSCING00000007512 ENSCING00000013176 ENSCING00000007514 #22 ENSCING00000007515 ENSCING00000013175 ENSCING00000021071 ENSCING00000013174 ENSCING00000013173 ENSCING00000024155 ENSCING00000007516 ENSCING00000013172 ENSCING00000013171 ENSCING00000007518 ENSCING00000007519 ENSCING00000007520 ENSCING00000022443 ENSCING00000019094 ENSCING00000022505 Ciona savignyi MODERN SPECIES 165 ENSCSAVG00000003891 ENSCSAVG00000003887 ENSCSAVG00000003813 ENSCSAVG00000003757 ENSCSAVG00000003732 ENSCSAVG00000003724 ENSCSAVG00000003719 ENSCSAVG00000003717 ENSCSAVG00000003642 #22 ENSCSAVG00000003007 ENSCSAVG00000003002