Artiodactyla ANCESTRAL SPECIES 31 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Suina ANCESTRAL SPECIES 56 ENSGT01090000260018.A.a.a.a.b.a ENSGT01090000260018.A.a.a.a.b.b ENSGT01090000260018.A.a.a.b.b.s.a.a ENSGT01090000260018.A.a.a.b.a ENSGT01090000260018.A.a.a.b.b.s.a.b ENSGT01090000259995.a.a.a ENSGT00390000010671 #37 ENSGT00730000111648 #36 ENSGT00570000079564 #35 ENSGT00390000018500.a #34 ENSGT01100000263521.a.a.b.a.b.b ENSGT00940000161175 #32 ENSGT00940000163610 #31 ENSGT00940000162327 #30 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00940000155815 #19 ENSGT00390000010309 #18 ENSGT00390000005590 #17 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00940000160510 #15 ENSGT00940000159618 #14 ENSGT00940000154494.a.b #13 ENSGT00950000182843.b #12 Chacoan peccary MODERN SPECIES 953 SHANK3 (ENSCWAG00000020472) #7 ENSCWAG00000020508 #8 ENSCWAG00000020519 #9 OR4A16 (ENSCWAG00000020533) #10 JMJD4 (ENSCWAG00000020541) #11 SNAP47 (ENSCWAG00000020551) #12 PRSS38 (ENSCWAG00000020558) #13 WNT9A (ENSCWAG00000020570) #14 WNT3A (ENSCWAG00000020576) #15 ARF1 (ENSCWAG00000020582) #16 C1orf35 (ENSCWAG00000020590) #17 MRPL55 (ENSCWAG00000020597) #18 GUK1 (ENSCWAG00000020604) #19 GJC2 (ENSCWAG00000020627) #20 IBA57 (ENSCWAG00000020636) #21 OBSCN (ENSCWAG00000020667) #22 TRIM11 (ENSCWAG00000020837) #23 TRIM17 (ENSCWAG00000020852) #24 H2AC25 (ENSCWAG00000020876) #25 H2BC26 (ENSCWAG00000020885) #26 RNF187 (ENSCWAG00000020893) #27 ENSCWAG00000020902 #28 ENSCWAG00000020908 #29 PGBD2 (ENSCWAG00000008376) #30 ENSCWAG00000008433 #31 ZNF692 (ENSCWAG00000008595) #32 ENSCWAG00000008779 #33 SH3BP5L (ENSCWAG00000008801) #34 LYPD8 (ENSCWAG00000008831) #35 ENSCWAG00000008871 #36 ENSCWAG00000008915 #37 Pig MODERN SPECIES 10 ENSSSCG00000032924 ENSSSCG00000040165 ENSSSCG00000014467 ENSSSCG00000036276 JMJD4 (ENSSSCG00000013983) #11 SNAP47 (ENSSSCG00000013984) #12 ENSSSCG00000057198 ENSSSCG00000048546 WNT9A (ENSSSCG00000024671) #14 WNT3A (ENSSSCG00000029870) #15 ARF1 (ENSSSCG00000013992) #16 C1orf35 (ENSSSCG00000013991) #17 MRPL55 (ENSSSCG00000029050) #18 ENSSSCG00000013990 #19 GJC2 (ENSSSCG00000013989) #20 OBSCN (ENSSSCG00000034569) #22 RNF187 (ENSSSCG00000032994) #27 H2BC26 (ENSSSCG00000061158) #26 H2AC25 (ENSSSCG00000047900) #25 TRIM17 (ENSSSCG00000014000) #24 TRIM11 (ENSSSCG00000035985) #23 ENSSSCG00000059454 ENSSSCG00000026598 ENSSSCG00000013980 ENSSSCG00000039611 PGBD2 (ENSSSCG00000033305) #30 ENSSSCG00000013976 #31 ZNF692 (ENSSSCG00000030672) #32 ZNF672 (ENSSSCG00000013978) SH3BP5L (ENSSSCG00000025900) #34 LYPD8 (ENSSSCG00000013973) #35 Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT01030000234648.a.b.a.b ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 Camelidae ANCESTRAL SPECIES 109 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00940000163657.j ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 Arabian camel MODERN SPECIES 22 ENSCDRG00005007599 #36 LYPD8 (ENSCDRG00005007575) #35 SH3BP5L (ENSCDRG00005007520) #34 ENSCDRG00005007493 #33 ENSCDRG00005007466 #32 JMJD4 (ENSCDRG00005007427) #11 SNAP47 (ENSCDRG00005007395) #12 PRSS38 (ENSCDRG00005007311) #13 WNT9A (ENSCDRG00005007206) #14 WNT3A (ENSCDRG00005007136) #15 ENSCDRG00005007080 MRPL55 (ENSCDRG00005007045) #18 GUK1 (ENSCDRG00005006904) #19 GJC2 (ENSCDRG00005006871) #20 IBA57 (ENSCDRG00005006837) #21 ENSCDRG00005006705 #22 TRIM11 (ENSCDRG00005006600) #23 TRIM17 (ENSCDRG00005006573) #24 H3-4 (ENSCDRG00005006553) H2AC25 (ENSCDRG00005006540) #25 H2BC26 (ENSCDRG00005006528) #26 ENSCDRG00005006516 #27 ENSCDRG00005006493 ENSCDRG00005006375 #31 Artiodactyla_b DUPLICATION Artiodactyla_b DUPLICATION Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00940000154756.A.kd.a #22 ENSGT00390000009510 #27 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263514.A.e.b ENSGT00940000162155 #24 ENSGT00940000160371 #23 ENSGT00940000154756.A.ld #22 ENSGT00390000006465 #21 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00940000155815 #19 ENSGT00390000010309 #18 ENSGT00390000005590 #17 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00940000160510 #15 ENSGT00940000159618 #14 Pecora ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Percora_a ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Bovidae ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Bovinae ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Bos ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Bos_a ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Wild yak MODERN SPECIES 610 ZNF354B (ENSBMUG00000013110) JMJD4 (ENSBMUG00000013129) #11 SNAP47 (ENSBMUG00000013160) #12 PRSS38 (ENSBMUG00000013170) #13 WNT9A (ENSBMUG00000013188) #14 WNT3A (ENSBMUG00000013208) #15 ARF1 (ENSBMUG00000013231) #16 C1orf35 (ENSBMUG00000013244) #17 MRPL55 (ENSBMUG00000013341) #18 GUK1 (ENSBMUG00000013370) #19 GJC2 (ENSBMUG00000013389) #20 IBA57 (ENSBMUG00000013400) #21 ENSBMUG00000013430 #22 ENSBMUG00000013541 #22 ENSBMUG00000013557 #22 Cetacea ANCESTRAL SPECIES 1 ENSGT01030000234648.a.b.a.b ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.rb.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.a #22 ENSGT00390000009510 #27 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00940000162155 #24 ENSGT00940000160371 #23 ENSGT01090000259995.a.a.b.a.a.a.a ENSGT00940000162327 #30 ENSGT00940000161175 #32 ENSGT01100000263552.g.b.a.a ENSGT00390000018500.a #34 ENSGT00570000079564 #35 ENSGT00730000111648 #36 ENSGT01090000259995.a.a.a ENSGT00940000162246 ENSGT01090000260045.C.e.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b Odontoceti ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Sperm whale MODERN SPECIES 11 JMJD4 (ENSPCTG00005001672) #11 SNAP47 (ENSPCTG00005001687) #12 PRSS38 (ENSPCTG00005001709) #13 WNT9A (ENSPCTG00005001728) #14 WNT3A (ENSPCTG00005001738) #15 ARF1 (ENSPCTG00005001753) #16 C1orf35 (ENSPCTG00005001766) #17 ENSPCTG00005001780 #18 GUK1 (ENSPCTG00005001793) #19 GJC2 (ENSPCTG00005001808) #20 IBA57 (ENSPCTG00005001814) #21 ENSPCTG00005001819 ENSPCTG00005001826 ENSPCTG00005001837 #22 ENSPCTG00005001845 #22 ENSPCTG00005001857 #22 RNF187 (ENSPCTG00005001868) #27 H2BC26 (ENSPCTG00005001875) #26 H2AC25 (ENSPCTG00005001884) #25 ENSPCTG00005001893 TRIM11 (ENSPCTG00005001906) #23 ENSPCTG00005001917 PGBD2 (ENSPCTG00005001930) #30 ZNF692 (ENSPCTG00005001942) #32 ZNF672 (ENSPCTG00005001950) SH3BP5L (ENSPCTG00005001958) #34 LYPD8 (ENSPCTG00005001972) #35 ENSPCTG00005001987 #36 TRIM58 (ENSPCTG00005002006) ENSPCTG00005002014 OR2G2 (ENSPCTG00005002019) Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b #22 Pecora ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b #22 Percora_a ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b #22 Bovidae ANCESTRAL SPECIES ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b #22 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 Bovinae DUPLICATION Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES 34 ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b.a.a #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 ENSGT00940000153503.a.a Bos DUPLICATION Bos ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.a.a.a #22 Bos_b ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.a.a.a #22 Cow DUPLICATION Cow MODERN SPECIES 26 ENSBTAG00000052161 ZNF354B (ENSBTAG00000017123) JMJD4 (ENSBTAG00000004191) #11 SNAP47 (ENSBTAG00000004188) #12 PRSS38 (ENSBTAG00000013977) #13 WNT9A (ENSBTAG00000020267) #14 WNT3A (ENSBTAG00000039397) #15 ARF1 (ENSBTAG00000007725) #16 C7H1orf35 (ENSBTAG00000020720) #17 MRPL55 (ENSBTAG00000020721) #18 GUK1 (ENSBTAG00000014775) #19 GJC2 (ENSBTAG00000014916) #20 IBA57 (ENSBTAG00000014918) #21 ENSBTAG00000049190 #22 ENSBTAG00000051744 #22 ENSBTAG00000040028 #22 ENSBTAG00000007820 TRIM11 (ENSBTAG00000039246) #23 TRIM17 (ENSBTAG00000018673) #24 H3-4 (ENSBTAG00000055153) H2AC25 (ENSBTAG00000037964) #25 H2BC26 (ENSBTAG00000053467) #26 RNF187 (ENSBTAG00000019667) #27 ENSBTAG00000052690 ZFP2 (ENSBTAG00000007122) ZNF454 (ENSBTAG00000004262) GRM6 (ENSBTAG00000016187) ENSBTAG00000034973 ZNF879 (ENSBTAG00000038541) ENSBTAG00000055301 ZNF354C (ENSBTAG00000002281) Cow MODERN SPECIES 26 ATP13A1 (ENSBTAG00000007128) ENSBTAG00000052161 ZNF354B (ENSBTAG00000017123) JMJD4 (ENSBTAG00000004191) #11 SNAP47 (ENSBTAG00000004188) #12 PRSS38 (ENSBTAG00000013977) #13 WNT9A (ENSBTAG00000020267) #14 WNT3A (ENSBTAG00000039397) #15 ARF1 (ENSBTAG00000007725) #16 C7H1orf35 (ENSBTAG00000020720) #17 MRPL55 (ENSBTAG00000020721) #18 GUK1 (ENSBTAG00000014775) #19 GJC2 (ENSBTAG00000014916) #20 IBA57 (ENSBTAG00000014918) #21 ENSBTAG00000049190 #22 ENSBTAG00000051744 #22 ENSBTAG00000040028 #22 ENSBTAG00000007820 TRIM11 (ENSBTAG00000039246) #23 TRIM17 (ENSBTAG00000018673) #24 H3-4 (ENSBTAG00000055153) H2AC25 (ENSBTAG00000037964) #25 H2BC26 (ENSBTAG00000053467) #26 RNF187 (ENSBTAG00000019667) #27 ENSBTAG00000052690 ZFP2 (ENSBTAG00000007122) ZNF454 (ENSBTAG00000004262) GRM6 (ENSBTAG00000016187) ENSBTAG00000034973 ZNF879 (ENSBTAG00000038541) ENSBTAG00000055301 Bos_a ANCESTRAL SPECIES 29 ENSGT01050000244941.B.c ENSGT00950000183110.a ENSGT00550000075064 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b.a.a.a #22 ENSGT00390000009312.n.b ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 Wild yak MODERN SPECIES 610 ZNF354B (ENSBMUG00000013110) JMJD4 (ENSBMUG00000013129) #11 SNAP47 (ENSBMUG00000013160) #12 PRSS38 (ENSBMUG00000013170) #13 WNT9A (ENSBMUG00000013188) #14 WNT3A (ENSBMUG00000013208) #15 ARF1 (ENSBMUG00000013231) #16 C1orf35 (ENSBMUG00000013244) #17 MRPL55 (ENSBMUG00000013341) #18 GUK1 (ENSBMUG00000013370) #19 GJC2 (ENSBMUG00000013389) #20 IBA57 (ENSBMUG00000013400) #21 ENSBMUG00000013430 #22 ENSBMUG00000013541 #22 ENSBMUG00000013557 #22 Bos ANCESTRAL SPECIES 34 ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b.a.a.b #22 ENSGT00390000009312.n.b ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 Bos_b ANCESTRAL SPECIES 36 ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b.a.a.b #22 ENSGT00390000009312.n.b ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 ENSGT00940000153503.a.a ENSGT00940000153137.a.b.a Cow MODERN SPECIES 26 GMIP (ENSBTAG00000015144) ATP13A1 (ENSBTAG00000007128) ENSBTAG00000052161 ZNF354B (ENSBTAG00000017123) JMJD4 (ENSBTAG00000004191) #11 SNAP47 (ENSBTAG00000004188) #12 PRSS38 (ENSBTAG00000013977) #13 WNT9A (ENSBTAG00000020267) #14 WNT3A (ENSBTAG00000039397) #15 ARF1 (ENSBTAG00000007725) #16 C7H1orf35 (ENSBTAG00000020720) #17 MRPL55 (ENSBTAG00000020721) #18 GUK1 (ENSBTAG00000014775) #19 GJC2 (ENSBTAG00000014916) #20 IBA57 (ENSBTAG00000014918) #21 ENSBTAG00000049190 #22 ENSBTAG00000051744 #22 ENSBTAG00000040028 #22 ENSBTAG00000007820 TRIM11 (ENSBTAG00000039246) #23 TRIM17 (ENSBTAG00000018673) #24 H3-4 (ENSBTAG00000055153) H2AC25 (ENSBTAG00000037964) #25 H2BC26 (ENSBTAG00000053467) #26 RNF187 (ENSBTAG00000019667) #27 ENSBTAG00000052690 ZFP2 (ENSBTAG00000007122) ZNF454 (ENSBTAG00000004262) GRM6 (ENSBTAG00000016187) ENSBTAG00000034973 ZNF879 (ENSBTAG00000038541) American bison DUPLICATION American bison MODERN SPECIES 3165 JMJD4 (ENSBBBG00000016083) #11 SNAP47 (ENSBBBG00000007139) #12 PRSS38 (ENSBBBG00000016108) #13 WNT9A (ENSBBBG00000016116) #14 WNT3A (ENSBBBG00000016145) #15 ARF1 (ENSBBBG00000016170) #16 C1orf35 (ENSBBBG00000016183) #17 MRPL55 (ENSBBBG00000004037) #18 GUK1 (ENSBBBG00000004041) #19 IBA57 (ENSBBBG00000016303) #21 ENSBBBG00000016321 ENSBBBG00000016327 #22 ENSBBBG00000016344 #22 ENSBBBG00000016350 #22 ENSBBBG00000016357 #22 ENSBBBG00000016369 #22 TRIM11 (ENSBBBG00000016378) #23 TRIM17 (ENSBBBG00000016399) #24 H3-4 (ENSBBBG00000004059) American bison MODERN SPECIES 3165 ZNF354B (ENSBBBG00000016063) JMJD4 (ENSBBBG00000016083) #11 SNAP47 (ENSBBBG00000007139) #12 PRSS38 (ENSBBBG00000016108) #13 WNT9A (ENSBBBG00000016116) #14 WNT3A (ENSBBBG00000016145) #15 ARF1 (ENSBBBG00000016170) #16 C1orf35 (ENSBBBG00000016183) #17 MRPL55 (ENSBBBG00000004037) #18 GUK1 (ENSBBBG00000004041) #19 IBA57 (ENSBBBG00000016303) #21 ENSBBBG00000016321 ENSBBBG00000016327 #22 ENSBBBG00000016344 #22 ENSBBBG00000016350 #22 ENSBBBG00000016357 #22 ENSBBBG00000016369 #22 TRIM11 (ENSBBBG00000016378) #23 TRIM17 (ENSBBBG00000016399) #24 H3-4 (ENSBBBG00000004059) Bovinae ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.a.b #22 Bos ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.a.b #22 Bos_a ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.a.b #22 Wild yak MODERN SPECIES 610 ZNF354B (ENSBMUG00000013110) JMJD4 (ENSBMUG00000013129) #11 SNAP47 (ENSBMUG00000013160) #12 PRSS38 (ENSBMUG00000013170) #13 WNT9A (ENSBMUG00000013188) #14 WNT3A (ENSBMUG00000013208) #15 ARF1 (ENSBMUG00000013231) #16 C1orf35 (ENSBMUG00000013244) #17 MRPL55 (ENSBMUG00000013341) #18 GUK1 (ENSBMUG00000013370) #19 GJC2 (ENSBMUG00000013389) #20 IBA57 (ENSBMUG00000013400) #21 ENSBMUG00000013430 #22 ENSBMUG00000013541 #22 ENSBMUG00000013557 #22 Bovinae ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.b #22 American bison MODERN SPECIES 3165 ENSBBBG00000016056 ZNF354B (ENSBBBG00000016063) JMJD4 (ENSBBBG00000016083) #11 SNAP47 (ENSBBBG00000007139) #12 PRSS38 (ENSBBBG00000016108) #13 WNT9A (ENSBBBG00000016116) #14 WNT3A (ENSBBBG00000016145) #15 ARF1 (ENSBBBG00000016170) #16 C1orf35 (ENSBBBG00000016183) #17 MRPL55 (ENSBBBG00000004037) #18 GUK1 (ENSBBBG00000004041) #19 IBA57 (ENSBBBG00000016303) #21 ENSBBBG00000016321 ENSBBBG00000016327 #22 ENSBBBG00000016344 #22 ENSBBBG00000016350 #22 ENSBBBG00000016357 #22 ENSBBBG00000016369 #22 TRIM11 (ENSBBBG00000016378) #23 TRIM17 (ENSBBBG00000016399) #24 H3-4 (ENSBBBG00000004059) Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT01030000234648.a.b.a.b ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00940000154756.A.kd.a #22 Cetacea ANCESTRAL SPECIES 113 ENSGT00550000074800.x ENSGT00940000154756.A.ld #22 Blue whale DUPLICATION Blue whale MODERN SPECIES 14 ZFP2 (ENSBMSG00010008682) ZNF354B (ENSBMSG00010008689) JMJD4 (ENSBMSG00010008694) #11 SNAP47 (ENSBMSG00010008703) #12 PRSS38 (ENSBMSG00010008714) #13 WNT9A (ENSBMSG00010008726) #14 WNT3A (ENSBMSG00010008734) #15 ENSBMSG00010008747 #16 C1orf35 (ENSBMSG00010008763) #17 ENSBMSG00010008778 #18 GUK1 (ENSBMSG00010008805) #19 GJC2 (ENSBMSG00010008838) #20 IBA57 (ENSBMSG00010008847) #21 ENSBMSG00010008859 ENSBMSG00010008882 #22 ENSBMSG00010000077 #22 RNF187 (ENSBMSG00010000103) #27 H2BC26 (ENSBMSG00010000114) #26 H2AC25 (ENSBMSG00010000131) #25 TRIM11 (ENSBMSG00010000144) #23 ENSBMSG00010000168 #28 ENSBMSG00010000187 ENSBMSG00010000207 PGBD2 (ENSBMSG00010000226) #30 ZNF692 (ENSBMSG00010000267) #32 ENSBMSG00010000289 SH3BP5L (ENSBMSG00010000308) #34 LYPD8 (ENSBMSG00010000338) #35 ENSBMSG00010000371 #36 ENSBMSG00010000389 ENSBMSG00010000428 Blue whale MODERN SPECIES 14 ZNF454 (ENSBMSG00010008671) ZFP2 (ENSBMSG00010008682) ZNF354B (ENSBMSG00010008689) JMJD4 (ENSBMSG00010008694) #11 SNAP47 (ENSBMSG00010008703) #12 PRSS38 (ENSBMSG00010008714) #13 WNT9A (ENSBMSG00010008726) #14 WNT3A (ENSBMSG00010008734) #15 ENSBMSG00010008747 #16 C1orf35 (ENSBMSG00010008763) #17 ENSBMSG00010008778 #18 GUK1 (ENSBMSG00010008805) #19 GJC2 (ENSBMSG00010008838) #20 IBA57 (ENSBMSG00010008847) #21 ENSBMSG00010008859 ENSBMSG00010008882 #22 ENSBMSG00010000077 #22 RNF187 (ENSBMSG00010000103) #27 H2BC26 (ENSBMSG00010000114) #26 H2AC25 (ENSBMSG00010000131) #25 TRIM11 (ENSBMSG00010000144) #23 ENSBMSG00010000168 #28 ENSBMSG00010000187 ENSBMSG00010000207 PGBD2 (ENSBMSG00010000226) #30 ZNF692 (ENSBMSG00010000267) #32 ENSBMSG00010000289 SH3BP5L (ENSBMSG00010000308) #34 LYPD8 (ENSBMSG00010000338) #35 ENSBMSG00010000371 #36 ENSBMSG00010000389 Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.rb.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00990000211596 ENSGT00550000074800.x ENSGT00940000154756.A.ld #22 ENSGT00390000009510 #27 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263514.A.e.a.a.u.b ENSGT00940000162155 #24 ENSGT00940000160371 #23 ENSGT01090000259995.a.a.b.a.a.a.a ENSGT00940000162327 #30 ENSGT00940000161175 #32 ENSGT01100000263552.g.b.a.a ENSGT00390000018500.a #34 ENSGT00570000079564 #35 ENSGT00730000111648 #36 ENSGT00940000162246 ENSGT01090000260045.C.e.a.b Sperm whale DUPLICATION Sperm whale MODERN SPECIES 11 ZFP2 (ENSPCTG00005001642) ZNF354B (ENSPCTG00005001661) JMJD4 (ENSPCTG00005001672) #11 SNAP47 (ENSPCTG00005001687) #12 PRSS38 (ENSPCTG00005001709) #13 WNT9A (ENSPCTG00005001728) #14 WNT3A (ENSPCTG00005001738) #15 ARF1 (ENSPCTG00005001753) #16 C1orf35 (ENSPCTG00005001766) #17 ENSPCTG00005001780 #18 GUK1 (ENSPCTG00005001793) #19 GJC2 (ENSPCTG00005001808) #20 IBA57 (ENSPCTG00005001814) #21 ENSPCTG00005001819 ENSPCTG00005001826 ENSPCTG00005001837 #22 ENSPCTG00005001845 #22 ENSPCTG00005001857 #22 RNF187 (ENSPCTG00005001868) #27 H2BC26 (ENSPCTG00005001875) #26 H2AC25 (ENSPCTG00005001884) #25 ENSPCTG00005001893 TRIM11 (ENSPCTG00005001906) #23 ENSPCTG00005001917 PGBD2 (ENSPCTG00005001930) #30 ZNF692 (ENSPCTG00005001942) #32 ZNF672 (ENSPCTG00005001950) SH3BP5L (ENSPCTG00005001958) #34 LYPD8 (ENSPCTG00005001972) #35 ENSPCTG00005001987 #36 TRIM58 (ENSPCTG00005002006) Sperm whale MODERN SPECIES 11 ZNF354B (ENSPCTG00005001661) JMJD4 (ENSPCTG00005001672) #11 SNAP47 (ENSPCTG00005001687) #12 PRSS38 (ENSPCTG00005001709) #13 WNT9A (ENSPCTG00005001728) #14 WNT3A (ENSPCTG00005001738) #15 ARF1 (ENSPCTG00005001753) #16 C1orf35 (ENSPCTG00005001766) #17 ENSPCTG00005001780 #18 GUK1 (ENSPCTG00005001793) #19 GJC2 (ENSPCTG00005001808) #20 IBA57 (ENSPCTG00005001814) #21 ENSPCTG00005001819 ENSPCTG00005001826 ENSPCTG00005001837 #22 ENSPCTG00005001845 #22 ENSPCTG00005001857 #22 RNF187 (ENSPCTG00005001868) #27 H2BC26 (ENSPCTG00005001875) #26 H2AC25 (ENSPCTG00005001884) #25 ENSPCTG00005001893 TRIM11 (ENSPCTG00005001906) #23 ENSPCTG00005001917 PGBD2 (ENSPCTG00005001930) #30 ZNF692 (ENSPCTG00005001942) #32 ZNF672 (ENSPCTG00005001950) SH3BP5L (ENSPCTG00005001958) #34 LYPD8 (ENSPCTG00005001972) #35 ENSPCTG00005001987 #36 TRIM58 (ENSPCTG00005002006) ENSPCTG00005002014 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.rb.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00990000211596 ENSGT00550000074800.x ENSGT00940000154756.A.ld #22 ENSGT00390000009510 #27 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263514.A.e.a.a.u.b ENSGT00940000162155 #24 ENSGT00940000160371 #23 ENSGT01090000259995.a.a.b.a.a.a.a ENSGT00940000162327 #30 ENSGT00940000161175 #32 ENSGT01100000263552.g.b.a.a ENSGT00390000018500.a #34 ENSGT00570000079564 #35 ENSGT00730000111648 #36 ENSGT00940000162246 ENSGT01090000260045.C.e.a.b Dolphin MODERN SPECIES 1162 OBSCN (ENSTTRG00000014296) #22 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.rb.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00990000211596 ENSGT00550000074800.x ENSGT00940000154756.A.ld #22 ENSGT00390000009510 #27 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263514.A.e.a.a.u.b ENSGT00940000162155 #24 ENSGT00940000160371 #23 ENSGT01090000259995.a.a.b.a.a.a.a ENSGT00940000162327 #30 ENSGT00940000161175 #32 ENSGT01100000263552.g.b.a.a ENSGT00390000018500.a #34 ENSGT00570000079564 #35 ENSGT00730000111648 #36 ENSGT00940000162246 ENSGT01090000260045.C.e.a.b Monodontidae ANCESTRAL SPECIES ENSGT00940000154756.A.ld #22 Narwhal MODERN SPECIES 150 ENSMMNG00015002347 #22 Vaquita DUPLICATION Vaquita MODERN SPECIES 14 ZFP2 (ENSPSNG00000007917) ZNF354B (ENSPSNG00000007886) JMJD4 (ENSPSNG00000007858) #11 SNAP47 (ENSPSNG00000007830) #12 PRSS38 (ENSPSNG00000007771) #13 WNT9A (ENSPSNG00000007743) #14 WNT3A (ENSPSNG00000007708) #15 ENSPSNG00000007683 #16 C1orf35 (ENSPSNG00000007656) #17 MRPL55 (ENSPSNG00000007632) #18 GUK1 (ENSPSNG00000007583) #19 GJC2 (ENSPSNG00000007534) #20 IBA57 (ENSPSNG00000007499) #21 ENSPSNG00000003866 ENSPSNG00000003825 #22 ENSPSNG00000003780 #22 RNF187 (ENSPSNG00000003755) #27 H2BC26 (ENSPSNG00000003742) #26 H2AC25 (ENSPSNG00000003735) #25 ENSPSNG00000003725 TRIM17 (ENSPSNG00000003706) #24 TRIM11 (ENSPSNG00000003681) #23 ENSPSNG00000003658 PGBD2 (ENSPSNG00000003638) #30 ZNF692 (ENSPSNG00000003614) #32 ENSPSNG00000003603 SH3BP5L (ENSPSNG00000003579) #34 ENSPSNG00000003568 LYPD8 (ENSPSNG00000003552) #35 ENSPSNG00000003536 #36 TRIM58 (ENSPSNG00000003501) Vaquita MODERN SPECIES 14 ZNF454 (ENSPSNG00000007949) ZFP2 (ENSPSNG00000007917) ZNF354B (ENSPSNG00000007886) JMJD4 (ENSPSNG00000007858) #11 SNAP47 (ENSPSNG00000007830) #12 PRSS38 (ENSPSNG00000007771) #13 WNT9A (ENSPSNG00000007743) #14 WNT3A (ENSPSNG00000007708) #15 ENSPSNG00000007683 #16 C1orf35 (ENSPSNG00000007656) #17 MRPL55 (ENSPSNG00000007632) #18 GUK1 (ENSPSNG00000007583) #19 GJC2 (ENSPSNG00000007534) #20 IBA57 (ENSPSNG00000007499) #21 ENSPSNG00000003866 ENSPSNG00000003825 #22 ENSPSNG00000003780 #22 RNF187 (ENSPSNG00000003755) #27 H2BC26 (ENSPSNG00000003742) #26 H2AC25 (ENSPSNG00000003735) #25 ENSPSNG00000003725 TRIM17 (ENSPSNG00000003706) #24 TRIM11 (ENSPSNG00000003681) #23 ENSPSNG00000003658 PGBD2 (ENSPSNG00000003638) #30 ZNF692 (ENSPSNG00000003614) #32 ENSPSNG00000003603 SH3BP5L (ENSPSNG00000003579) #34 ENSPSNG00000003568 LYPD8 (ENSPSNG00000003552) #35 ENSPSNG00000003536 #36 Pecora ANCESTRAL SPECIES ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 ENSGT00940000153503.a.a ENSGT00940000153137.a.b.a Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 32 ZNF354B (ENSCHYG00000010723) ENSCHYG00000010707 JMJD4 (ENSCHYG00000010663) #11 SNAP47 (ENSCHYG00000010619) #12 PRSS38 (ENSCHYG00000010560) #13 WNT9A (ENSCHYG00000010511) #14 WNT3A (ENSCHYG00000010445) #15 ENSCHYG00000010399 #16 C1orf35 (ENSCHYG00000010289) #17 MRPL55 (ENSCHYG00000010212) #18 GUK1 (ENSCHYG00000010059) #19 GJC2 (ENSCHYG00000010036) #20 IBA57 (ENSCHYG00000010014) #21 ENSCHYG00000009985 ENSCHYG00000009774 #22 ENSCHYG00000009620 #22 TRIM11 (ENSCHYG00000009542) #23 TRIM17 (ENSCHYG00000009461) #24 H3-4 (ENSCHYG00000009438) H2AC25 (ENSCHYG00000009419) #25 ENSCHYG00000009390 ##26 RNF187 (ENSCHYG00000009353) #27 ENSCHYG00000009333 ENSCHYG00000009280 ZFP2 (ENSCHYG00000009266) ZNF454 (ENSCHYG00000009231) GRM6 (ENSCHYG00000025499) ZNF879 (ENSCHYG00000025473) ZNF354C (ENSCHYG00000025442) ENSCHYG00000025422 ADAMTS2 (ENSCHYG00000025226) Yarkand deer MODERN SPECIES 32 ENSCHYG00000010766 ZNF354B (ENSCHYG00000010723) ENSCHYG00000010707 JMJD4 (ENSCHYG00000010663) #11 SNAP47 (ENSCHYG00000010619) #12 PRSS38 (ENSCHYG00000010560) #13 WNT9A (ENSCHYG00000010511) #14 WNT3A (ENSCHYG00000010445) #15 ENSCHYG00000010399 #16 C1orf35 (ENSCHYG00000010289) #17 MRPL55 (ENSCHYG00000010212) #18 GUK1 (ENSCHYG00000010059) #19 GJC2 (ENSCHYG00000010036) #20 IBA57 (ENSCHYG00000010014) #21 ENSCHYG00000009985 ENSCHYG00000009774 #22 ENSCHYG00000009620 #22 TRIM11 (ENSCHYG00000009542) #23 TRIM17 (ENSCHYG00000009461) #24 H3-4 (ENSCHYG00000009438) H2AC25 (ENSCHYG00000009419) #25 ENSCHYG00000009390 ##26 RNF187 (ENSCHYG00000009353) #27 ENSCHYG00000009333 ENSCHYG00000009280 ZFP2 (ENSCHYG00000009266) ZNF454 (ENSCHYG00000009231) GRM6 (ENSCHYG00000025499) ZNF879 (ENSCHYG00000025473) ZNF354C (ENSCHYG00000025442) ENSCHYG00000025422 Percora_a ANCESTRAL SPECIES ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 ENSGT00940000153503.a.a ENSGT00940000153137.a.b.a Siberian musk deer MODERN SPECIES 1213 ENSMMSG00000022637 ZNF354B (ENSMMSG00000022631) JMJD4 (ENSMMSG00000022617) #11 SNAP47 (ENSMMSG00000022600) #12 ENSMMSG00000022591 PRSS38 (ENSMMSG00000022575) #13 WNT9A (ENSMMSG00000022550) #14 WNT3A (ENSMMSG00000022541) #15 ARF1 (ENSMMSG00000022533) #16 C1orf35 (ENSMMSG00000022529) #17 MRPL55 (ENSMMSG00000022520) #18 GUK1 (ENSMMSG00000022498) #19 GJC2 (ENSMMSG00000022491) #20 IBA57 (ENSMMSG00000022482) #21 OBSCN (ENSMMSG00000020369) #22 TRIM11 (ENSMMSG00000020106) #23 TRIM17 (ENSMMSG00000020070) #24 H3-4 (ENSMMSG00000020062) H2AC25 (ENSMMSG00000020054) #25 H2BC26 (ENSMMSG00000020045) #26 RNF187 (ENSMMSG00000020017) #27 ZNF454 (ENSMMSG00000019980) GRM6 (ENSMMSG00000019933) ZNF879 (ENSMMSG00000019906) ZNF354C (ENSMMSG00000024233) FLT4 (ENSMMSG00000024202) Bovidae ANCESTRAL SPECIES ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b #22 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 ENSGT00940000153503.a.a Caprinae ANCESTRAL SPECIES 32 ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334.a ENSGT00940000153503.a.a Rambouillet Sheep MODERN SPECIES 21 C1orf35 (ENSOARG00020018506) #17 MRPL55 (ENSOARG00020018459) #18 GUK1 (ENSOARG00020018354) #19 GJC2 (ENSOARG00020018337) #20 IBA57 (ENSOARG00020018299) #21 TRIM11 (ENSOARG00020017090) #23 TRIM17 (ENSOARG00020017007) #24 H3-4 (ENSOARG00020016979) H2AC25 (ENSOARG00020016951) #25 HIST3H2BB (ENSOARG00020016921) #26 RNF187 (ENSOARG00020016886) #27 ZFP2 (ENSOARG00020016872) ZNF454 (ENSOARG00020016811) GRM6 (ENSOARG00020016554) ZNF354C (ENSOARG00020016338) ENSOARG00020016295 #22 ADAMTS2 (ENSOARG00020015867) ENSOARG00020015796 ENSOARG00020015427 HNRNPH1 (ENSOARG00020015212) ENSOARG00020015166 CANX (ENSOARG00020014950) MAML1 (ENSOARG00020014863) LTC4S (ENSOARG00020014721) MGAT4B (ENSOARG00020014516) ENSOARG00020014482 SQSTM1 (ENSOARG00020014013) ENSOARG00020013856 ENSOARG00020013782 ENSOARG00020013747 ENSOARG00020013692 Goat MODERN SPECIES 26 GMIP (ENSCHIG00000006935) ATP13A1 (ENSCHIG00000027146) ENSCHIG00000027175 ZNF354B (ENSCHIG00000024384) JMJD4 (ENSCHIG00000001908) #11 SNAP47 (ENSCHIG00000025042) #12 ENSCHIG00000004906 WNT9A (ENSCHIG00000009523) #14 WNT3A (ENSCHIG00000016159) #15 ARF1 (ENSCHIG00000010924) #16 C1orf35 (ENSCHIG00000020666) #17 MRPL55 (ENSCHIG00000024153) #18 GUK1 (ENSCHIG00000020301) #19 GJC2 (ENSCHIG00000012045) #20 IBA57 (ENSCHIG00000025813) #21 OBSCN (ENSCHIG00000026141) #22 TRIM11 (ENSCHIG00000010660) #23 TRIM17 (ENSCHIG00000017072) #24 H3-4 (ENSCHIG00000008243) H2AC25 (ENSCHIG00000006649) #25 H2BC26 (ENSCHIG00000009284) #26 RNF187 (ENSCHIG00000012732) #27 ENSCHIG00000025835 ZFP2 (ENSCHIG00000010314) ZNF454 (ENSCHIG00000013008) GRM6 (ENSCHIG00000024892) ZNF879 (ENSCHIG00000020873) ZNF354C (ENSCHIG00000014371) ADAMTS2 (ENSCHIG00000027055) RUFY1 (ENSCHIG00000025380) HNRNPH1 (ENSCHIG00000021285) Bovinae ANCESTRAL SPECIES ENSGT00940000154756.A.ld #22 Bos ANCESTRAL SPECIES ENSGT00940000154756.A.ld #22 Bos_b ANCESTRAL SPECIES ENSGT00940000154756.A.ld #22 Hybrid Bos Indicus MODERN SPECIES 26 ENSBIXG00005000504 JMJD4 (ENSBIXG00005005916) #11 SNAP47 (ENSBIXG00005011285) #12 ENSBIXG00005011259 ENSBIXG00005001061 ENSBIXG00005011249 PRSS38 (ENSBIXG00005011238) #13 WNT9A (ENSBIXG00005006783) #14 WNT3A (ENSBIXG00005011222) #15 ARF1 (ENSBIXG00005011212) #16 C1orf35 (ENSBIXG00005001035) #17 MRPL55 (ENSBIXG00005011160) #18 GUK1 (ENSBIXG00005011045) #19 IBA57 (ENSBIXG00005010975) #21 ENSBIXG00005010951 OBSCN (ENSBIXG00005010529) #22 ENSBIXG00005029278 TRIM11 (ENSBIXG00005029289) #23 TRIM17 (ENSBIXG00005029306) #24 H3-4 (ENSBIXG00005029320) ENSBIXG00005029327 H2AC25 (ENSBIXG00005029330) #25 H2BC26 (ENSBIXG00005029334) #26 RNF187 (ENSBIXG00005029336) #27 ZNF454 (ENSBIXG00005029356) GRM6 (ENSBIXG00005029370) ZNF354C (ENSBIXG00005029390) ADAMTS2 (ENSBIXG00005029444) RUFY1 (ENSBIXG00005029537) HNRNPH1 (ENSBIXG00005029588) ENSBIXG00005029650 American bison DUPLICATION American bison MODERN SPECIES 3165 GMIP (ENSBBBG00000016022) ATP13A1 (ENSBBBG00000003990) ENSBBBG00000016056 ZNF354B (ENSBBBG00000016063) JMJD4 (ENSBBBG00000016083) #11 SNAP47 (ENSBBBG00000007139) #12 PRSS38 (ENSBBBG00000016108) #13 WNT9A (ENSBBBG00000016116) #14 WNT3A (ENSBBBG00000016145) #15 ARF1 (ENSBBBG00000016170) #16 C1orf35 (ENSBBBG00000016183) #17 MRPL55 (ENSBBBG00000004037) #18 GUK1 (ENSBBBG00000004041) #19 IBA57 (ENSBBBG00000016303) #21 ENSBBBG00000016321 ENSBBBG00000016327 #22 ENSBBBG00000016344 #22 ENSBBBG00000016350 #22 ENSBBBG00000016357 #22 ENSBBBG00000016369 #22 TRIM11 (ENSBBBG00000016378) #23 TRIM17 (ENSBBBG00000016399) #24 H3-4 (ENSBBBG00000004059) American bison MODERN SPECIES 3165 ATP13A1 (ENSBBBG00000003990) ENSBBBG00000016056 ZNF354B (ENSBBBG00000016063) JMJD4 (ENSBBBG00000016083) #11 SNAP47 (ENSBBBG00000007139) #12 PRSS38 (ENSBBBG00000016108) #13 WNT9A (ENSBBBG00000016116) #14 WNT3A (ENSBBBG00000016145) #15 ARF1 (ENSBBBG00000016170) #16 C1orf35 (ENSBBBG00000016183) #17 MRPL55 (ENSBBBG00000004037) #18 GUK1 (ENSBBBG00000004041) #19 IBA57 (ENSBBBG00000016303) #21 ENSBBBG00000016321 ENSBBBG00000016327 #22 ENSBBBG00000016344 #22 ENSBBBG00000016350 #22 ENSBBBG00000016357 #22 ENSBBBG00000016369 #22 TRIM11 (ENSBBBG00000016378) #23 TRIM17 (ENSBBBG00000016399) #24 H3-4 (ENSBBBG00000004059)