Eutheria ANCESTRAL SPECIES 46 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00390000016274 Boreoeutheria ANCESTRAL SPECIES 24 ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Laurasiatheria ANCESTRAL SPECIES 30 ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Laurasiatheria_a ANCESTRAL SPECIES 23 ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Artiodactyla ANCESTRAL SPECIES 31 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Suina ANCESTRAL SPECIES 56 ENSGT01090000260018.A.a.a.a.b.a ENSGT01090000260018.A.a.a.a.b.b ENSGT01090000260018.A.a.a.b.b.s.a.a ENSGT01090000260018.A.a.a.b.a ENSGT01090000260018.A.a.a.b.b.s.a.b ENSGT01090000259995.a.a.a ENSGT00390000010671 #37 ENSGT00730000111648 #36 ENSGT00570000079564 #35 ENSGT00390000018500.a #34 ENSGT01100000263521.a.a.b.a.b.b ENSGT00940000161175 #32 ENSGT00940000163610 #31 ENSGT00940000162327 #30 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00940000155815 #19 ENSGT00390000010309 #18 ENSGT00390000005590 #17 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00940000160510 #15 ENSGT00940000159618 #14 ENSGT00940000154494.a.b #13 ENSGT00950000182843.b #12 Chacoan peccary MODERN SPECIES 953 SHANK3 (ENSCWAG00000020472) #7 ENSCWAG00000020508 #8 ENSCWAG00000020519 #9 OR4A16 (ENSCWAG00000020533) #10 JMJD4 (ENSCWAG00000020541) #11 SNAP47 (ENSCWAG00000020551) #12 PRSS38 (ENSCWAG00000020558) #13 WNT9A (ENSCWAG00000020570) #14 WNT3A (ENSCWAG00000020576) #15 ARF1 (ENSCWAG00000020582) #16 C1orf35 (ENSCWAG00000020590) #17 MRPL55 (ENSCWAG00000020597) #18 GUK1 (ENSCWAG00000020604) #19 GJC2 (ENSCWAG00000020627) #20 IBA57 (ENSCWAG00000020636) #21 OBSCN (ENSCWAG00000020667) #22 TRIM11 (ENSCWAG00000020837) #23 TRIM17 (ENSCWAG00000020852) #24 H2AC25 (ENSCWAG00000020876) #25 H2BC26 (ENSCWAG00000020885) #26 RNF187 (ENSCWAG00000020893) #27 ENSCWAG00000020902 #28 ENSCWAG00000020908 #29 PGBD2 (ENSCWAG00000008376) #30 ENSCWAG00000008433 #31 ZNF692 (ENSCWAG00000008595) #32 ENSCWAG00000008779 #33 SH3BP5L (ENSCWAG00000008801) #34 LYPD8 (ENSCWAG00000008831) #35 ENSCWAG00000008871 #36 ENSCWAG00000008915 #37 Pig MODERN SPECIES 10 ENSSSCG00000032924 ENSSSCG00000040165 ENSSSCG00000014467 ENSSSCG00000036276 JMJD4 (ENSSSCG00000013983) #11 SNAP47 (ENSSSCG00000013984) #12 ENSSSCG00000057198 ENSSSCG00000048546 WNT9A (ENSSSCG00000024671) #14 WNT3A (ENSSSCG00000029870) #15 ARF1 (ENSSSCG00000013992) #16 C1orf35 (ENSSSCG00000013991) #17 MRPL55 (ENSSSCG00000029050) #18 ENSSSCG00000013990 #19 GJC2 (ENSSSCG00000013989) #20 OBSCN (ENSSSCG00000034569) #22 RNF187 (ENSSSCG00000032994) #27 H2BC26 (ENSSSCG00000061158) #26 H2AC25 (ENSSSCG00000047900) #25 TRIM17 (ENSSSCG00000014000) #24 TRIM11 (ENSSSCG00000035985) #23 ENSSSCG00000059454 ENSSSCG00000026598 ENSSSCG00000013980 ENSSSCG00000039611 PGBD2 (ENSSSCG00000033305) #30 ENSSSCG00000013976 #31 ZNF692 (ENSSSCG00000030672) #32 ZNF672 (ENSSSCG00000013978) SH3BP5L (ENSSSCG00000025900) #34 LYPD8 (ENSSSCG00000013973) #35 Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT01030000234648.a.b.a.b ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 Camelidae ANCESTRAL SPECIES 109 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00940000163657.j ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 Arabian camel MODERN SPECIES 22 ENSCDRG00005007599 #36 LYPD8 (ENSCDRG00005007575) #35 SH3BP5L (ENSCDRG00005007520) #34 ENSCDRG00005007493 #33 ENSCDRG00005007466 #32 JMJD4 (ENSCDRG00005007427) #11 SNAP47 (ENSCDRG00005007395) #12 PRSS38 (ENSCDRG00005007311) #13 WNT9A (ENSCDRG00005007206) #14 WNT3A (ENSCDRG00005007136) #15 ENSCDRG00005007080 MRPL55 (ENSCDRG00005007045) #18 GUK1 (ENSCDRG00005006904) #19 GJC2 (ENSCDRG00005006871) #20 IBA57 (ENSCDRG00005006837) #21 ENSCDRG00005006705 #22 TRIM11 (ENSCDRG00005006600) #23 TRIM17 (ENSCDRG00005006573) #24 H3-4 (ENSCDRG00005006553) H2AC25 (ENSCDRG00005006540) #25 H2BC26 (ENSCDRG00005006528) #26 ENSCDRG00005006516 #27 ENSCDRG00005006493 ENSCDRG00005006375 #31 Artiodactyla_b DUPLICATION Artiodactyla_b DUPLICATION Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00940000154756.A.kd.a #22 ENSGT00390000009510 #27 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263514.A.e.b ENSGT00940000162155 #24 ENSGT00940000160371 #23 ENSGT00940000154756.A.ld #22 ENSGT00390000006465 #21 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00940000155815 #19 ENSGT00390000010309 #18 ENSGT00390000005590 #17 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00940000160510 #15 ENSGT00940000159618 #14 Pecora ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Percora_a ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Bovidae ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Bovinae ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Bos ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Bos_a ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Wild yak MODERN SPECIES 610 ZNF354B (ENSBMUG00000013110) JMJD4 (ENSBMUG00000013129) #11 SNAP47 (ENSBMUG00000013160) #12 PRSS38 (ENSBMUG00000013170) #13 WNT9A (ENSBMUG00000013188) #14 WNT3A (ENSBMUG00000013208) #15 ARF1 (ENSBMUG00000013231) #16 C1orf35 (ENSBMUG00000013244) #17 MRPL55 (ENSBMUG00000013341) #18 GUK1 (ENSBMUG00000013370) #19 GJC2 (ENSBMUG00000013389) #20 IBA57 (ENSBMUG00000013400) #21 ENSBMUG00000013430 #22 ENSBMUG00000013541 #22 ENSBMUG00000013557 #22 Cetacea ANCESTRAL SPECIES 1 ENSGT01030000234648.a.b.a.b ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.rb.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.a #22 ENSGT00390000009510 #27 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00940000162155 #24 ENSGT00940000160371 #23 ENSGT01090000259995.a.a.b.a.a.a.a ENSGT00940000162327 #30 ENSGT00940000161175 #32 ENSGT01100000263552.g.b.a.a ENSGT00390000018500.a #34 ENSGT00570000079564 #35 ENSGT00730000111648 #36 ENSGT01090000259995.a.a.a ENSGT00940000162246 ENSGT01090000260045.C.e.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b Odontoceti ANCESTRAL SPECIES ENSGT00940000154756.A.kd.a #22 Sperm whale MODERN SPECIES 11 JMJD4 (ENSPCTG00005001672) #11 SNAP47 (ENSPCTG00005001687) #12 PRSS38 (ENSPCTG00005001709) #13 WNT9A (ENSPCTG00005001728) #14 WNT3A (ENSPCTG00005001738) #15 ARF1 (ENSPCTG00005001753) #16 C1orf35 (ENSPCTG00005001766) #17 ENSPCTG00005001780 #18 GUK1 (ENSPCTG00005001793) #19 GJC2 (ENSPCTG00005001808) #20 IBA57 (ENSPCTG00005001814) #21 ENSPCTG00005001819 ENSPCTG00005001826 ENSPCTG00005001837 #22 ENSPCTG00005001845 #22 ENSPCTG00005001857 #22 RNF187 (ENSPCTG00005001868) #27 H2BC26 (ENSPCTG00005001875) #26 H2AC25 (ENSPCTG00005001884) #25 ENSPCTG00005001893 TRIM11 (ENSPCTG00005001906) #23 ENSPCTG00005001917 PGBD2 (ENSPCTG00005001930) #30 ZNF692 (ENSPCTG00005001942) #32 ZNF672 (ENSPCTG00005001950) SH3BP5L (ENSPCTG00005001958) #34 LYPD8 (ENSPCTG00005001972) #35 ENSPCTG00005001987 #36 TRIM58 (ENSPCTG00005002006) ENSPCTG00005002014 OR2G2 (ENSPCTG00005002019) Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b #22 Pecora ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b #22 Percora_a ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b #22 Bovidae ANCESTRAL SPECIES ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b #22 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 Bovinae DUPLICATION Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES 34 ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b.a.a #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 ENSGT00940000153503.a.a Bos DUPLICATION Bos ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.a.a.a #22 Bos_b ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.a.a.a #22 Cow DUPLICATION Cow MODERN SPECIES 26 ENSBTAG00000052161 ZNF354B (ENSBTAG00000017123) JMJD4 (ENSBTAG00000004191) #11 SNAP47 (ENSBTAG00000004188) #12 PRSS38 (ENSBTAG00000013977) #13 WNT9A (ENSBTAG00000020267) #14 WNT3A (ENSBTAG00000039397) #15 ARF1 (ENSBTAG00000007725) #16 C7H1orf35 (ENSBTAG00000020720) #17 MRPL55 (ENSBTAG00000020721) #18 GUK1 (ENSBTAG00000014775) #19 GJC2 (ENSBTAG00000014916) #20 IBA57 (ENSBTAG00000014918) #21 ENSBTAG00000049190 #22 ENSBTAG00000051744 #22 ENSBTAG00000040028 #22 ENSBTAG00000007820 TRIM11 (ENSBTAG00000039246) #23 TRIM17 (ENSBTAG00000018673) #24 H3-4 (ENSBTAG00000055153) H2AC25 (ENSBTAG00000037964) #25 H2BC26 (ENSBTAG00000053467) #26 RNF187 (ENSBTAG00000019667) #27 ENSBTAG00000052690 ZFP2 (ENSBTAG00000007122) ZNF454 (ENSBTAG00000004262) GRM6 (ENSBTAG00000016187) ENSBTAG00000034973 ZNF879 (ENSBTAG00000038541) ENSBTAG00000055301 ZNF354C (ENSBTAG00000002281) Cow MODERN SPECIES 26 ATP13A1 (ENSBTAG00000007128) ENSBTAG00000052161 ZNF354B (ENSBTAG00000017123) JMJD4 (ENSBTAG00000004191) #11 SNAP47 (ENSBTAG00000004188) #12 PRSS38 (ENSBTAG00000013977) #13 WNT9A (ENSBTAG00000020267) #14 WNT3A (ENSBTAG00000039397) #15 ARF1 (ENSBTAG00000007725) #16 C7H1orf35 (ENSBTAG00000020720) #17 MRPL55 (ENSBTAG00000020721) #18 GUK1 (ENSBTAG00000014775) #19 GJC2 (ENSBTAG00000014916) #20 IBA57 (ENSBTAG00000014918) #21 ENSBTAG00000049190 #22 ENSBTAG00000051744 #22 ENSBTAG00000040028 #22 ENSBTAG00000007820 TRIM11 (ENSBTAG00000039246) #23 TRIM17 (ENSBTAG00000018673) #24 H3-4 (ENSBTAG00000055153) H2AC25 (ENSBTAG00000037964) #25 H2BC26 (ENSBTAG00000053467) #26 RNF187 (ENSBTAG00000019667) #27 ENSBTAG00000052690 ZFP2 (ENSBTAG00000007122) ZNF454 (ENSBTAG00000004262) GRM6 (ENSBTAG00000016187) ENSBTAG00000034973 ZNF879 (ENSBTAG00000038541) ENSBTAG00000055301 Bos_a ANCESTRAL SPECIES 29 ENSGT01050000244941.B.c ENSGT00950000183110.a ENSGT00550000075064 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b.a.a.a #22 ENSGT00390000009312.n.b ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 Wild yak MODERN SPECIES 610 ZNF354B (ENSBMUG00000013110) JMJD4 (ENSBMUG00000013129) #11 SNAP47 (ENSBMUG00000013160) #12 PRSS38 (ENSBMUG00000013170) #13 WNT9A (ENSBMUG00000013188) #14 WNT3A (ENSBMUG00000013208) #15 ARF1 (ENSBMUG00000013231) #16 C1orf35 (ENSBMUG00000013244) #17 MRPL55 (ENSBMUG00000013341) #18 GUK1 (ENSBMUG00000013370) #19 GJC2 (ENSBMUG00000013389) #20 IBA57 (ENSBMUG00000013400) #21 ENSBMUG00000013430 #22 ENSBMUG00000013541 #22 ENSBMUG00000013557 #22 Bos ANCESTRAL SPECIES 34 ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b.a.a.b #22 ENSGT00390000009312.n.b ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 Bos_b ANCESTRAL SPECIES 36 ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b.a.a.b #22 ENSGT00390000009312.n.b ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 ENSGT00940000153503.a.a ENSGT00940000153137.a.b.a Cow MODERN SPECIES 26 GMIP (ENSBTAG00000015144) ATP13A1 (ENSBTAG00000007128) ENSBTAG00000052161 ZNF354B (ENSBTAG00000017123) JMJD4 (ENSBTAG00000004191) #11 SNAP47 (ENSBTAG00000004188) #12 PRSS38 (ENSBTAG00000013977) #13 WNT9A (ENSBTAG00000020267) #14 WNT3A (ENSBTAG00000039397) #15 ARF1 (ENSBTAG00000007725) #16 C7H1orf35 (ENSBTAG00000020720) #17 MRPL55 (ENSBTAG00000020721) #18 GUK1 (ENSBTAG00000014775) #19 GJC2 (ENSBTAG00000014916) #20 IBA57 (ENSBTAG00000014918) #21 ENSBTAG00000049190 #22 ENSBTAG00000051744 #22 ENSBTAG00000040028 #22 ENSBTAG00000007820 TRIM11 (ENSBTAG00000039246) #23 TRIM17 (ENSBTAG00000018673) #24 H3-4 (ENSBTAG00000055153) H2AC25 (ENSBTAG00000037964) #25 H2BC26 (ENSBTAG00000053467) #26 RNF187 (ENSBTAG00000019667) #27 ENSBTAG00000052690 ZFP2 (ENSBTAG00000007122) ZNF454 (ENSBTAG00000004262) GRM6 (ENSBTAG00000016187) ENSBTAG00000034973 ZNF879 (ENSBTAG00000038541) American bison DUPLICATION American bison MODERN SPECIES 3165 JMJD4 (ENSBBBG00000016083) #11 SNAP47 (ENSBBBG00000007139) #12 PRSS38 (ENSBBBG00000016108) #13 WNT9A (ENSBBBG00000016116) #14 WNT3A (ENSBBBG00000016145) #15 ARF1 (ENSBBBG00000016170) #16 C1orf35 (ENSBBBG00000016183) #17 MRPL55 (ENSBBBG00000004037) #18 GUK1 (ENSBBBG00000004041) #19 IBA57 (ENSBBBG00000016303) #21 ENSBBBG00000016321 ENSBBBG00000016327 #22 ENSBBBG00000016344 #22 ENSBBBG00000016350 #22 ENSBBBG00000016357 #22 ENSBBBG00000016369 #22 TRIM11 (ENSBBBG00000016378) #23 TRIM17 (ENSBBBG00000016399) #24 H3-4 (ENSBBBG00000004059) American bison MODERN SPECIES 3165 ZNF354B (ENSBBBG00000016063) JMJD4 (ENSBBBG00000016083) #11 SNAP47 (ENSBBBG00000007139) #12 PRSS38 (ENSBBBG00000016108) #13 WNT9A (ENSBBBG00000016116) #14 WNT3A (ENSBBBG00000016145) #15 ARF1 (ENSBBBG00000016170) #16 C1orf35 (ENSBBBG00000016183) #17 MRPL55 (ENSBBBG00000004037) #18 GUK1 (ENSBBBG00000004041) #19 IBA57 (ENSBBBG00000016303) #21 ENSBBBG00000016321 ENSBBBG00000016327 #22 ENSBBBG00000016344 #22 ENSBBBG00000016350 #22 ENSBBBG00000016357 #22 ENSBBBG00000016369 #22 TRIM11 (ENSBBBG00000016378) #23 TRIM17 (ENSBBBG00000016399) #24 H3-4 (ENSBBBG00000004059) Bovinae ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.a.b #22 Bos ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.a.b #22 Bos_a ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.a.b #22 Wild yak MODERN SPECIES 610 ZNF354B (ENSBMUG00000013110) JMJD4 (ENSBMUG00000013129) #11 SNAP47 (ENSBMUG00000013160) #12 PRSS38 (ENSBMUG00000013170) #13 WNT9A (ENSBMUG00000013188) #14 WNT3A (ENSBMUG00000013208) #15 ARF1 (ENSBMUG00000013231) #16 C1orf35 (ENSBMUG00000013244) #17 MRPL55 (ENSBMUG00000013341) #18 GUK1 (ENSBMUG00000013370) #19 GJC2 (ENSBMUG00000013389) #20 IBA57 (ENSBMUG00000013400) #21 ENSBMUG00000013430 #22 ENSBMUG00000013541 #22 ENSBMUG00000013557 #22 Bovinae ANCESTRAL SPECIES ENSGT00940000154756.A.kd.b.b #22 American bison MODERN SPECIES 3165 ENSBBBG00000016056 ZNF354B (ENSBBBG00000016063) JMJD4 (ENSBBBG00000016083) #11 SNAP47 (ENSBBBG00000007139) #12 PRSS38 (ENSBBBG00000016108) #13 WNT9A (ENSBBBG00000016116) #14 WNT3A (ENSBBBG00000016145) #15 ARF1 (ENSBBBG00000016170) #16 C1orf35 (ENSBBBG00000016183) #17 MRPL55 (ENSBBBG00000004037) #18 GUK1 (ENSBBBG00000004041) #19 IBA57 (ENSBBBG00000016303) #21 ENSBBBG00000016321 ENSBBBG00000016327 #22 ENSBBBG00000016344 #22 ENSBBBG00000016350 #22 ENSBBBG00000016357 #22 ENSBBBG00000016369 #22 TRIM11 (ENSBBBG00000016378) #23 TRIM17 (ENSBBBG00000016399) #24 H3-4 (ENSBBBG00000004059) Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT01030000234648.a.b.a.b ENSGT00940000162181 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00940000154756.A.kd.a #22 Cetacea ANCESTRAL SPECIES 113 ENSGT00550000074800.x ENSGT00940000154756.A.ld #22 Blue whale DUPLICATION Blue whale MODERN SPECIES 14 ZFP2 (ENSBMSG00010008682) ZNF354B (ENSBMSG00010008689) JMJD4 (ENSBMSG00010008694) #11 SNAP47 (ENSBMSG00010008703) #12 PRSS38 (ENSBMSG00010008714) #13 WNT9A (ENSBMSG00010008726) #14 WNT3A (ENSBMSG00010008734) #15 ENSBMSG00010008747 #16 C1orf35 (ENSBMSG00010008763) #17 ENSBMSG00010008778 #18 GUK1 (ENSBMSG00010008805) #19 GJC2 (ENSBMSG00010008838) #20 IBA57 (ENSBMSG00010008847) #21 ENSBMSG00010008859 ENSBMSG00010008882 #22 ENSBMSG00010000077 #22 RNF187 (ENSBMSG00010000103) #27 H2BC26 (ENSBMSG00010000114) #26 H2AC25 (ENSBMSG00010000131) #25 TRIM11 (ENSBMSG00010000144) #23 ENSBMSG00010000168 #28 ENSBMSG00010000187 ENSBMSG00010000207 PGBD2 (ENSBMSG00010000226) #30 ZNF692 (ENSBMSG00010000267) #32 ENSBMSG00010000289 SH3BP5L (ENSBMSG00010000308) #34 LYPD8 (ENSBMSG00010000338) #35 ENSBMSG00010000371 #36 ENSBMSG00010000389 ENSBMSG00010000428 Blue whale MODERN SPECIES 14 ZNF454 (ENSBMSG00010008671) ZFP2 (ENSBMSG00010008682) ZNF354B (ENSBMSG00010008689) JMJD4 (ENSBMSG00010008694) #11 SNAP47 (ENSBMSG00010008703) #12 PRSS38 (ENSBMSG00010008714) #13 WNT9A (ENSBMSG00010008726) #14 WNT3A (ENSBMSG00010008734) #15 ENSBMSG00010008747 #16 C1orf35 (ENSBMSG00010008763) #17 ENSBMSG00010008778 #18 GUK1 (ENSBMSG00010008805) #19 GJC2 (ENSBMSG00010008838) #20 IBA57 (ENSBMSG00010008847) #21 ENSBMSG00010008859 ENSBMSG00010008882 #22 ENSBMSG00010000077 #22 RNF187 (ENSBMSG00010000103) #27 H2BC26 (ENSBMSG00010000114) #26 H2AC25 (ENSBMSG00010000131) #25 TRIM11 (ENSBMSG00010000144) #23 ENSBMSG00010000168 #28 ENSBMSG00010000187 ENSBMSG00010000207 PGBD2 (ENSBMSG00010000226) #30 ZNF692 (ENSBMSG00010000267) #32 ENSBMSG00010000289 SH3BP5L (ENSBMSG00010000308) #34 LYPD8 (ENSBMSG00010000338) #35 ENSBMSG00010000371 #36 ENSBMSG00010000389 Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.rb.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00990000211596 ENSGT00550000074800.x ENSGT00940000154756.A.ld #22 ENSGT00390000009510 #27 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263514.A.e.a.a.u.b ENSGT00940000162155 #24 ENSGT00940000160371 #23 ENSGT01090000259995.a.a.b.a.a.a.a ENSGT00940000162327 #30 ENSGT00940000161175 #32 ENSGT01100000263552.g.b.a.a ENSGT00390000018500.a #34 ENSGT00570000079564 #35 ENSGT00730000111648 #36 ENSGT00940000162246 ENSGT01090000260045.C.e.a.b Sperm whale DUPLICATION Sperm whale MODERN SPECIES 11 ZFP2 (ENSPCTG00005001642) ZNF354B (ENSPCTG00005001661) JMJD4 (ENSPCTG00005001672) #11 SNAP47 (ENSPCTG00005001687) #12 PRSS38 (ENSPCTG00005001709) #13 WNT9A (ENSPCTG00005001728) #14 WNT3A (ENSPCTG00005001738) #15 ARF1 (ENSPCTG00005001753) #16 C1orf35 (ENSPCTG00005001766) #17 ENSPCTG00005001780 #18 GUK1 (ENSPCTG00005001793) #19 GJC2 (ENSPCTG00005001808) #20 IBA57 (ENSPCTG00005001814) #21 ENSPCTG00005001819 ENSPCTG00005001826 ENSPCTG00005001837 #22 ENSPCTG00005001845 #22 ENSPCTG00005001857 #22 RNF187 (ENSPCTG00005001868) #27 H2BC26 (ENSPCTG00005001875) #26 H2AC25 (ENSPCTG00005001884) #25 ENSPCTG00005001893 TRIM11 (ENSPCTG00005001906) #23 ENSPCTG00005001917 PGBD2 (ENSPCTG00005001930) #30 ZNF692 (ENSPCTG00005001942) #32 ZNF672 (ENSPCTG00005001950) SH3BP5L (ENSPCTG00005001958) #34 LYPD8 (ENSPCTG00005001972) #35 ENSPCTG00005001987 #36 TRIM58 (ENSPCTG00005002006) Sperm whale MODERN SPECIES 11 ZNF354B (ENSPCTG00005001661) JMJD4 (ENSPCTG00005001672) #11 SNAP47 (ENSPCTG00005001687) #12 PRSS38 (ENSPCTG00005001709) #13 WNT9A (ENSPCTG00005001728) #14 WNT3A (ENSPCTG00005001738) #15 ARF1 (ENSPCTG00005001753) #16 C1orf35 (ENSPCTG00005001766) #17 ENSPCTG00005001780 #18 GUK1 (ENSPCTG00005001793) #19 GJC2 (ENSPCTG00005001808) #20 IBA57 (ENSPCTG00005001814) #21 ENSPCTG00005001819 ENSPCTG00005001826 ENSPCTG00005001837 #22 ENSPCTG00005001845 #22 ENSPCTG00005001857 #22 RNF187 (ENSPCTG00005001868) #27 H2BC26 (ENSPCTG00005001875) #26 H2AC25 (ENSPCTG00005001884) #25 ENSPCTG00005001893 TRIM11 (ENSPCTG00005001906) #23 ENSPCTG00005001917 PGBD2 (ENSPCTG00005001930) #30 ZNF692 (ENSPCTG00005001942) #32 ZNF672 (ENSPCTG00005001950) SH3BP5L (ENSPCTG00005001958) #34 LYPD8 (ENSPCTG00005001972) #35 ENSPCTG00005001987 #36 TRIM58 (ENSPCTG00005002006) ENSPCTG00005002014 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.rb.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00990000211596 ENSGT00550000074800.x ENSGT00940000154756.A.ld #22 ENSGT00390000009510 #27 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263514.A.e.a.a.u.b ENSGT00940000162155 #24 ENSGT00940000160371 #23 ENSGT01090000259995.a.a.b.a.a.a.a ENSGT00940000162327 #30 ENSGT00940000161175 #32 ENSGT01100000263552.g.b.a.a ENSGT00390000018500.a #34 ENSGT00570000079564 #35 ENSGT00730000111648 #36 ENSGT00940000162246 ENSGT01090000260045.C.e.a.b Dolphin MODERN SPECIES 1162 OBSCN (ENSTTRG00000014296) #22 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000162743 ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.rb.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00990000211596 ENSGT00550000074800.x ENSGT00940000154756.A.ld #22 ENSGT00390000009510 #27 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263514.A.e.a.a.u.b ENSGT00940000162155 #24 ENSGT00940000160371 #23 ENSGT01090000259995.a.a.b.a.a.a.a ENSGT00940000162327 #30 ENSGT00940000161175 #32 ENSGT01100000263552.g.b.a.a ENSGT00390000018500.a #34 ENSGT00570000079564 #35 ENSGT00730000111648 #36 ENSGT00940000162246 ENSGT01090000260045.C.e.a.b Monodontidae ANCESTRAL SPECIES ENSGT00940000154756.A.ld #22 Narwhal MODERN SPECIES 150 ENSMMNG00015002347 #22 Vaquita DUPLICATION Vaquita MODERN SPECIES 14 ZFP2 (ENSPSNG00000007917) ZNF354B (ENSPSNG00000007886) JMJD4 (ENSPSNG00000007858) #11 SNAP47 (ENSPSNG00000007830) #12 PRSS38 (ENSPSNG00000007771) #13 WNT9A (ENSPSNG00000007743) #14 WNT3A (ENSPSNG00000007708) #15 ENSPSNG00000007683 #16 C1orf35 (ENSPSNG00000007656) #17 MRPL55 (ENSPSNG00000007632) #18 GUK1 (ENSPSNG00000007583) #19 GJC2 (ENSPSNG00000007534) #20 IBA57 (ENSPSNG00000007499) #21 ENSPSNG00000003866 ENSPSNG00000003825 #22 ENSPSNG00000003780 #22 RNF187 (ENSPSNG00000003755) #27 H2BC26 (ENSPSNG00000003742) #26 H2AC25 (ENSPSNG00000003735) #25 ENSPSNG00000003725 TRIM17 (ENSPSNG00000003706) #24 TRIM11 (ENSPSNG00000003681) #23 ENSPSNG00000003658 PGBD2 (ENSPSNG00000003638) #30 ZNF692 (ENSPSNG00000003614) #32 ENSPSNG00000003603 SH3BP5L (ENSPSNG00000003579) #34 ENSPSNG00000003568 LYPD8 (ENSPSNG00000003552) #35 ENSPSNG00000003536 #36 TRIM58 (ENSPSNG00000003501) Vaquita MODERN SPECIES 14 ZNF454 (ENSPSNG00000007949) ZFP2 (ENSPSNG00000007917) ZNF354B (ENSPSNG00000007886) JMJD4 (ENSPSNG00000007858) #11 SNAP47 (ENSPSNG00000007830) #12 PRSS38 (ENSPSNG00000007771) #13 WNT9A (ENSPSNG00000007743) #14 WNT3A (ENSPSNG00000007708) #15 ENSPSNG00000007683 #16 C1orf35 (ENSPSNG00000007656) #17 MRPL55 (ENSPSNG00000007632) #18 GUK1 (ENSPSNG00000007583) #19 GJC2 (ENSPSNG00000007534) #20 IBA57 (ENSPSNG00000007499) #21 ENSPSNG00000003866 ENSPSNG00000003825 #22 ENSPSNG00000003780 #22 RNF187 (ENSPSNG00000003755) #27 H2BC26 (ENSPSNG00000003742) #26 H2AC25 (ENSPSNG00000003735) #25 ENSPSNG00000003725 TRIM17 (ENSPSNG00000003706) #24 TRIM11 (ENSPSNG00000003681) #23 ENSPSNG00000003658 PGBD2 (ENSPSNG00000003638) #30 ZNF692 (ENSPSNG00000003614) #32 ENSPSNG00000003603 SH3BP5L (ENSPSNG00000003579) #34 ENSPSNG00000003568 LYPD8 (ENSPSNG00000003552) #35 ENSPSNG00000003536 #36 Pecora ANCESTRAL SPECIES ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 ENSGT00940000153503.a.a ENSGT00940000153137.a.b.a Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 32 ZNF354B (ENSCHYG00000010723) ENSCHYG00000010707 JMJD4 (ENSCHYG00000010663) #11 SNAP47 (ENSCHYG00000010619) #12 PRSS38 (ENSCHYG00000010560) #13 WNT9A (ENSCHYG00000010511) #14 WNT3A (ENSCHYG00000010445) #15 ENSCHYG00000010399 #16 C1orf35 (ENSCHYG00000010289) #17 MRPL55 (ENSCHYG00000010212) #18 GUK1 (ENSCHYG00000010059) #19 GJC2 (ENSCHYG00000010036) #20 IBA57 (ENSCHYG00000010014) #21 ENSCHYG00000009985 ENSCHYG00000009774 #22 ENSCHYG00000009620 #22 TRIM11 (ENSCHYG00000009542) #23 TRIM17 (ENSCHYG00000009461) #24 H3-4 (ENSCHYG00000009438) H2AC25 (ENSCHYG00000009419) #25 ENSCHYG00000009390 ##26 RNF187 (ENSCHYG00000009353) #27 ENSCHYG00000009333 ENSCHYG00000009280 ZFP2 (ENSCHYG00000009266) ZNF454 (ENSCHYG00000009231) GRM6 (ENSCHYG00000025499) ZNF879 (ENSCHYG00000025473) ZNF354C (ENSCHYG00000025442) ENSCHYG00000025422 ADAMTS2 (ENSCHYG00000025226) Yarkand deer MODERN SPECIES 32 ENSCHYG00000010766 ZNF354B (ENSCHYG00000010723) ENSCHYG00000010707 JMJD4 (ENSCHYG00000010663) #11 SNAP47 (ENSCHYG00000010619) #12 PRSS38 (ENSCHYG00000010560) #13 WNT9A (ENSCHYG00000010511) #14 WNT3A (ENSCHYG00000010445) #15 ENSCHYG00000010399 #16 C1orf35 (ENSCHYG00000010289) #17 MRPL55 (ENSCHYG00000010212) #18 GUK1 (ENSCHYG00000010059) #19 GJC2 (ENSCHYG00000010036) #20 IBA57 (ENSCHYG00000010014) #21 ENSCHYG00000009985 ENSCHYG00000009774 #22 ENSCHYG00000009620 #22 TRIM11 (ENSCHYG00000009542) #23 TRIM17 (ENSCHYG00000009461) #24 H3-4 (ENSCHYG00000009438) H2AC25 (ENSCHYG00000009419) #25 ENSCHYG00000009390 ##26 RNF187 (ENSCHYG00000009353) #27 ENSCHYG00000009333 ENSCHYG00000009280 ZFP2 (ENSCHYG00000009266) ZNF454 (ENSCHYG00000009231) GRM6 (ENSCHYG00000025499) ZNF879 (ENSCHYG00000025473) ZNF354C (ENSCHYG00000025442) ENSCHYG00000025422 Percora_a ANCESTRAL SPECIES ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 ENSGT00940000153503.a.a ENSGT00940000153137.a.b.a Siberian musk deer MODERN SPECIES 1213 ENSMMSG00000022637 ZNF354B (ENSMMSG00000022631) JMJD4 (ENSMMSG00000022617) #11 SNAP47 (ENSMMSG00000022600) #12 ENSMMSG00000022591 PRSS38 (ENSMMSG00000022575) #13 WNT9A (ENSMMSG00000022550) #14 WNT3A (ENSMMSG00000022541) #15 ARF1 (ENSMMSG00000022533) #16 C1orf35 (ENSMMSG00000022529) #17 MRPL55 (ENSMMSG00000022520) #18 GUK1 (ENSMMSG00000022498) #19 GJC2 (ENSMMSG00000022491) #20 IBA57 (ENSMMSG00000022482) #21 OBSCN (ENSMMSG00000020369) #22 TRIM11 (ENSMMSG00000020106) #23 TRIM17 (ENSMMSG00000020070) #24 H3-4 (ENSMMSG00000020062) H2AC25 (ENSMMSG00000020054) #25 H2BC26 (ENSMMSG00000020045) #26 RNF187 (ENSMMSG00000020017) #27 ZNF454 (ENSMMSG00000019980) GRM6 (ENSMMSG00000019933) ZNF879 (ENSMMSG00000019906) ZNF354C (ENSMMSG00000024233) FLT4 (ENSMMSG00000024202) Bovidae ANCESTRAL SPECIES ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.kd.b #22 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334 ENSGT00940000153503.a.a Caprinae ANCESTRAL SPECIES 32 ENSGT00950000183110.a ENSGT00550000075064 ENSGT00730000111029.e.a ENSGT00940000162570 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a.b #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.ld #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00390000008694.b.b.c.b.cb.b ENSGT00940000162743 ENSGT00940000162181 ENSGT01030000234648.a.b.a.b ENSGT00940000162816 ENSGT00940000162715 ENSGT00940000156647 ENSGT00940000158334.a ENSGT00940000153503.a.a Rambouillet Sheep MODERN SPECIES 21 C1orf35 (ENSOARG00020018506) #17 MRPL55 (ENSOARG00020018459) #18 GUK1 (ENSOARG00020018354) #19 GJC2 (ENSOARG00020018337) #20 IBA57 (ENSOARG00020018299) #21 TRIM11 (ENSOARG00020017090) #23 TRIM17 (ENSOARG00020017007) #24 H3-4 (ENSOARG00020016979) H2AC25 (ENSOARG00020016951) #25 HIST3H2BB (ENSOARG00020016921) #26 RNF187 (ENSOARG00020016886) #27 ZFP2 (ENSOARG00020016872) ZNF454 (ENSOARG00020016811) GRM6 (ENSOARG00020016554) ZNF354C (ENSOARG00020016338) ENSOARG00020016295 #22 ADAMTS2 (ENSOARG00020015867) ENSOARG00020015796 ENSOARG00020015427 HNRNPH1 (ENSOARG00020015212) ENSOARG00020015166 CANX (ENSOARG00020014950) MAML1 (ENSOARG00020014863) LTC4S (ENSOARG00020014721) MGAT4B (ENSOARG00020014516) ENSOARG00020014482 SQSTM1 (ENSOARG00020014013) ENSOARG00020013856 ENSOARG00020013782 ENSOARG00020013747 ENSOARG00020013692 Goat MODERN SPECIES 26 GMIP (ENSCHIG00000006935) ATP13A1 (ENSCHIG00000027146) ENSCHIG00000027175 ZNF354B (ENSCHIG00000024384) JMJD4 (ENSCHIG00000001908) #11 SNAP47 (ENSCHIG00000025042) #12 ENSCHIG00000004906 WNT9A (ENSCHIG00000009523) #14 WNT3A (ENSCHIG00000016159) #15 ARF1 (ENSCHIG00000010924) #16 C1orf35 (ENSCHIG00000020666) #17 MRPL55 (ENSCHIG00000024153) #18 GUK1 (ENSCHIG00000020301) #19 GJC2 (ENSCHIG00000012045) #20 IBA57 (ENSCHIG00000025813) #21 OBSCN (ENSCHIG00000026141) #22 TRIM11 (ENSCHIG00000010660) #23 TRIM17 (ENSCHIG00000017072) #24 H3-4 (ENSCHIG00000008243) H2AC25 (ENSCHIG00000006649) #25 H2BC26 (ENSCHIG00000009284) #26 RNF187 (ENSCHIG00000012732) #27 ENSCHIG00000025835 ZFP2 (ENSCHIG00000010314) ZNF454 (ENSCHIG00000013008) GRM6 (ENSCHIG00000024892) ZNF879 (ENSCHIG00000020873) ZNF354C (ENSCHIG00000014371) ADAMTS2 (ENSCHIG00000027055) RUFY1 (ENSCHIG00000025380) HNRNPH1 (ENSCHIG00000021285) Bovinae ANCESTRAL SPECIES ENSGT00940000154756.A.ld #22 Bos ANCESTRAL SPECIES ENSGT00940000154756.A.ld #22 Bos_b ANCESTRAL SPECIES ENSGT00940000154756.A.ld #22 Hybrid Bos Indicus MODERN SPECIES 26 ENSBIXG00005000504 JMJD4 (ENSBIXG00005005916) #11 SNAP47 (ENSBIXG00005011285) #12 ENSBIXG00005011259 ENSBIXG00005001061 ENSBIXG00005011249 PRSS38 (ENSBIXG00005011238) #13 WNT9A (ENSBIXG00005006783) #14 WNT3A (ENSBIXG00005011222) #15 ARF1 (ENSBIXG00005011212) #16 C1orf35 (ENSBIXG00005001035) #17 MRPL55 (ENSBIXG00005011160) #18 GUK1 (ENSBIXG00005011045) #19 IBA57 (ENSBIXG00005010975) #21 ENSBIXG00005010951 OBSCN (ENSBIXG00005010529) #22 ENSBIXG00005029278 TRIM11 (ENSBIXG00005029289) #23 TRIM17 (ENSBIXG00005029306) #24 H3-4 (ENSBIXG00005029320) ENSBIXG00005029327 H2AC25 (ENSBIXG00005029330) #25 H2BC26 (ENSBIXG00005029334) #26 RNF187 (ENSBIXG00005029336) #27 ZNF454 (ENSBIXG00005029356) GRM6 (ENSBIXG00005029370) ZNF354C (ENSBIXG00005029390) ADAMTS2 (ENSBIXG00005029444) RUFY1 (ENSBIXG00005029537) HNRNPH1 (ENSBIXG00005029588) ENSBIXG00005029650 American bison DUPLICATION American bison MODERN SPECIES 3165 GMIP (ENSBBBG00000016022) ATP13A1 (ENSBBBG00000003990) ENSBBBG00000016056 ZNF354B (ENSBBBG00000016063) JMJD4 (ENSBBBG00000016083) #11 SNAP47 (ENSBBBG00000007139) #12 PRSS38 (ENSBBBG00000016108) #13 WNT9A (ENSBBBG00000016116) #14 WNT3A (ENSBBBG00000016145) #15 ARF1 (ENSBBBG00000016170) #16 C1orf35 (ENSBBBG00000016183) #17 MRPL55 (ENSBBBG00000004037) #18 GUK1 (ENSBBBG00000004041) #19 IBA57 (ENSBBBG00000016303) #21 ENSBBBG00000016321 ENSBBBG00000016327 #22 ENSBBBG00000016344 #22 ENSBBBG00000016350 #22 ENSBBBG00000016357 #22 ENSBBBG00000016369 #22 TRIM11 (ENSBBBG00000016378) #23 TRIM17 (ENSBBBG00000016399) #24 H3-4 (ENSBBBG00000004059) American bison MODERN SPECIES 3165 ATP13A1 (ENSBBBG00000003990) ENSBBBG00000016056 ZNF354B (ENSBBBG00000016063) JMJD4 (ENSBBBG00000016083) #11 SNAP47 (ENSBBBG00000007139) #12 PRSS38 (ENSBBBG00000016108) #13 WNT9A (ENSBBBG00000016116) #14 WNT3A (ENSBBBG00000016145) #15 ARF1 (ENSBBBG00000016170) #16 C1orf35 (ENSBBBG00000016183) #17 MRPL55 (ENSBBBG00000004037) #18 GUK1 (ENSBBBG00000004041) #19 IBA57 (ENSBBBG00000016303) #21 ENSBBBG00000016321 ENSBBBG00000016327 #22 ENSBBBG00000016344 #22 ENSBBBG00000016350 #22 ENSBBBG00000016357 #22 ENSBBBG00000016369 #22 TRIM11 (ENSBBBG00000016378) #23 TRIM17 (ENSBBBG00000016399) #24 H3-4 (ENSBBBG00000004059) Laurasiatheria_b ANCESTRAL SPECIES 24 ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 Carnivora ANCESTRAL SPECIES 28 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT01030000234553.b.b.d.c.a ENSGT01090000259995.a.a.b.a.b.a ENSGT00940000161967 ENSGT00940000162415 ENSGT01100000263548.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b Felidae ANCESTRAL SPECIES 6 ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000158017.d ENSGT01090000259995.a.a.b.a.b.a ENSGT00940000161967 ENSGT00940000162415 ENSGT01100000263548.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b ENSGT01090000260044.A.b.a.a.a.a.a ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01100000263548.a.b.b Panthera ANCESTRAL SPECIES 6 ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00940000161967 ENSGT00940000162415 ENSGT01100000263548.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b ENSGT01090000260044.A.b.a.a.a.a.a ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01100000263548.a.b.b ENSGT01100000263486.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT00940000158134.A Panthera_a ANCESTRAL SPECIES 3 ENSGT01090000260018.A.a.b.a ENSGT00940000160338 ENSGT00940000162750 ENSGT00530000063632.B ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00940000161967 ENSGT00940000162415 ENSGT01100000263548.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b ENSGT01090000260044.A.b.a.a.a.a.a ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01100000263548.a.b.b ENSGT01100000263486.a.b.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT00940000158134.A lion DUPLICATION lion MODERN SPECIES ENSPLOG00000002906 ZFP62 (ENSPLOG00000002927) MGAT1 (ENSPLOG00000002940) JMJD4 (ENSPLOG00000002956) #11 SNAP47 (ENSPLOG00000002987) #12 ENSPLOG00000003011 PRSS38 (ENSPLOG00000003023) #13 WNT9A (ENSPLOG00000000004) #14 WNT3A (ENSPLOG00000000013) #15 ARF1 (ENSPLOG00000000016) #16 C1orf35 (ENSPLOG00000000019) #17 MRPL55 (ENSPLOG00000000024) #18 GUK1 (ENSPLOG00000000033) #19 GJC2 (ENSPLOG00000000039) #20 IBA57 (ENSPLOG00000000043) #21 ENSPLOG00000000051 #22 ENSPLOG00000000078 #22 TRIM11 (ENSPLOG00000000094) #23 TRIM17 (ENSPLOG00000000102) #24 H2AC25 (ENSPLOG00000000118) #25 H2BC26 (ENSPLOG00000000122) #26 RNF187 (ENSPLOG00000000130) #27 ENSPLOG00000000153 #28 ENSPLOG00000000167 #28 ENSPLOG00000000176 ZNF496 (ENSPLOG00000000182) NLRP3 (ENSPLOG00000000198) ENSPLOG00000000215 OR2B11 (ENSPLOG00000000220) ENSPLOG00000000228 OR2C3 (ENSPLOG00000000232) lion MODERN SPECIES ZFP62 (ENSPLOG00000002927) MGAT1 (ENSPLOG00000002940) JMJD4 (ENSPLOG00000002956) #11 SNAP47 (ENSPLOG00000002987) #12 ENSPLOG00000003011 PRSS38 (ENSPLOG00000003023) #13 WNT9A (ENSPLOG00000000004) #14 WNT3A (ENSPLOG00000000013) #15 ARF1 (ENSPLOG00000000016) #16 C1orf35 (ENSPLOG00000000019) #17 MRPL55 (ENSPLOG00000000024) #18 GUK1 (ENSPLOG00000000033) #19 GJC2 (ENSPLOG00000000039) #20 IBA57 (ENSPLOG00000000043) #21 ENSPLOG00000000051 #22 ENSPLOG00000000078 #22 TRIM11 (ENSPLOG00000000094) #23 TRIM17 (ENSPLOG00000000102) #24 H2AC25 (ENSPLOG00000000118) #25 H2BC26 (ENSPLOG00000000122) #26 RNF187 (ENSPLOG00000000130) #27 ENSPLOG00000000153 #28 ENSPLOG00000000167 #28 ENSPLOG00000000176 ZNF496 (ENSPLOG00000000182) NLRP3 (ENSPLOG00000000198) ENSPLOG00000000215 OR2B11 (ENSPLOG00000000220) ENSPLOG00000000228 OR2C3 (ENSPLOG00000000232) GCSAML (ENSPLOG00000000252) Caniformia ANCESTRAL SPECIES 34 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT01030000234553.b.b.d.c.a Canidae ANCESTRAL SPECIES 64 ENSGT01090000259995.b.b.a.a.b.i.a.a.a.b ENSGT01090000259995.b.b.a.a.b.j.b ENSGT00940000162666 ENSGT01090000260086.E.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815.c #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Canis_lupus DUPLICATION Canis_lupus ANCESTRAL SPECIES 51 ENSGT00390000000053.t ENSGT01090000259995.b.b.a.a.b.j.b ENSGT00940000162666 ENSGT01090000260086.E.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.jb #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815.c #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.ed #22 ENSGT00940000154756.A.fd #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT00940000160426 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997.g #28 ENSGT00940000163997.h #28 Dog MODERN SPECIES 5 OR2L3B (ENSCAFG00845008326) ENSCAFG00845008294 ENSCAFG00845008271 ENSCAFG00845008246 JMJD4 (ENSCAFG00845008215) #11 SNAP47 (ENSCAFG00845008129) #12 PRSS38 (ENSCAFG00845008050) #13 WNT9A (ENSCAFG00845008006) #14 WNT3A (ENSCAFG00845007960) #15 ARF1 (ENSCAFG00845007924) #16 C1orf35 (ENSCAFG00845007876) #17 MRPL55 (ENSCAFG00845007834) #18 GUK1 (ENSCAFG00845007785) #19 GJC2 (ENSCAFG00845007738) #20 IBA57 (ENSCAFG00845007710) #21 ENSCAFG00845007646 #22 ENSCAFG00845007619 #22 ENSCAFG00845007586 #22 ENSCAFG00845007457 #22 TRIM17 (ENSCAFG00845007329) #23 HIST3H2A (ENSCAFG00845007204) #25 H2BC26 (ENSCAFG00845007167) #26 ENSCAFG00845007128 ##26 ENSCAFG00845007077 #27 ENSCAFG00845006991 #28 ENSCAFG00845006907 #28 ENSCAFG00845006866 #12 ENSCAFG00845006842 ENSCAFG00845006817 Dingo MODERN SPECIES 372 ENSCAFG00020005648 ENSCAFG00020005654 OR13G1 (ENSCAFG00020005659) OR6F1 (ENSCAFG00020005660) ENSCAFG00020005667 JMJD4 (ENSCAFG00020005670) #11 SNAP47 (ENSCAFG00020005687) #12 PRSS38 (ENSCAFG00020005690) #13 WNT9A (ENSCAFG00020005694) #14 WNT3A (ENSCAFG00020005706) #15 ARF1 (ENSCAFG00020005724) #16 ENSCAFG00020005738 #17 MRPL55 (ENSCAFG00020005742) #18 ENSCAFG00020005747 #19 IBA57 (ENSCAFG00020005762) #21 ENSCAFG00020005770 #22 ENSCAFG00020005782 #22 ENSCAFG00020005800 #22 ENSCAFG00020005812 #22 ENSCAFG00020005814 #22 ENSCAFG00020005817 #22 ENSCAFG00020005824 #22 TRIM11 (ENSCAFG00020005850) #23 TRIM17 (ENSCAFG00020005854) #24 ENSCAFG00020005861 H2BC26 (ENSCAFG00020005888) #26 ENSCAFG00020005896 ##26 RNF187 (ENSCAFG00020005898) #27 ENSCAFG00020005906 #28 ENSCAFG00020005924 #28 ENSCAFG00020005930 Canis_lupus ANCESTRAL SPECIES 51 ENSGT01090000259995.b.b.a.a.b.j.b ENSGT00940000162666 ENSGT01090000260086.E.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.jb #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815.c #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.ed #22 ENSGT00940000154756.A.fd #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT00940000160426 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997.g #28 ENSGT00940000163997.h #28 Dingo DUPLICATION Dingo DUPLICATION Dingo DUPLICATION Dingo DUPLICATION Dingo DUPLICATION Dingo MODERN SPECIES 372 SNAP47 (ENSCAFG00020005687) #12 PRSS38 (ENSCAFG00020005690) #13 WNT9A (ENSCAFG00020005694) #14 WNT3A (ENSCAFG00020005706) #15 ARF1 (ENSCAFG00020005724) #16 ENSCAFG00020005738 #17 MRPL55 (ENSCAFG00020005742) #18 ENSCAFG00020005747 #19 IBA57 (ENSCAFG00020005762) #21 ENSCAFG00020005770 #22 ENSCAFG00020005782 #22 ENSCAFG00020005800 #22 ENSCAFG00020005812 #22 ENSCAFG00020005814 #22 ENSCAFG00020005817 #22 ENSCAFG00020005824 #22 TRIM11 (ENSCAFG00020005850) #23 TRIM17 (ENSCAFG00020005854) #24 ENSCAFG00020005861 H2BC26 (ENSCAFG00020005888) #26 ENSCAFG00020005896 ##26 RNF187 (ENSCAFG00020005898) #27 ENSCAFG00020005906 #28 ENSCAFG00020005924 #28 ENSCAFG00020005930 Dingo MODERN SPECIES 372 ENSCAFG00020005667 JMJD4 (ENSCAFG00020005670) #11 SNAP47 (ENSCAFG00020005687) #12 PRSS38 (ENSCAFG00020005690) #13 WNT9A (ENSCAFG00020005694) #14 WNT3A (ENSCAFG00020005706) #15 ARF1 (ENSCAFG00020005724) #16 ENSCAFG00020005738 #17 MRPL55 (ENSCAFG00020005742) #18 ENSCAFG00020005747 #19 IBA57 (ENSCAFG00020005762) #21 ENSCAFG00020005770 #22 ENSCAFG00020005782 #22 ENSCAFG00020005800 #22 ENSCAFG00020005812 #22 ENSCAFG00020005814 #22 ENSCAFG00020005817 #22 ENSCAFG00020005824 #22 TRIM11 (ENSCAFG00020005850) #23 TRIM17 (ENSCAFG00020005854) #24 ENSCAFG00020005861 H2BC26 (ENSCAFG00020005888) #26 ENSCAFG00020005896 ##26 RNF187 (ENSCAFG00020005898) #27 ENSCAFG00020005906 #28 ENSCAFG00020005924 #28 ENSCAFG00020005930 Dingo MODERN SPECIES 372 JMJD4 (ENSCAFG00020005670) #11 SNAP47 (ENSCAFG00020005687) #12 PRSS38 (ENSCAFG00020005690) #13 WNT9A (ENSCAFG00020005694) #14 WNT3A (ENSCAFG00020005706) #15 ARF1 (ENSCAFG00020005724) #16 ENSCAFG00020005738 #17 MRPL55 (ENSCAFG00020005742) #18 ENSCAFG00020005747 #19 IBA57 (ENSCAFG00020005762) #21 ENSCAFG00020005770 #22 ENSCAFG00020005782 #22 ENSCAFG00020005800 #22 ENSCAFG00020005812 #22 ENSCAFG00020005814 #22 ENSCAFG00020005817 #22 ENSCAFG00020005824 #22 TRIM11 (ENSCAFG00020005850) #23 TRIM17 (ENSCAFG00020005854) #24 ENSCAFG00020005861 H2BC26 (ENSCAFG00020005888) #26 ENSCAFG00020005896 ##26 RNF187 (ENSCAFG00020005898) #27 ENSCAFG00020005906 #28 ENSCAFG00020005924 #28 ENSCAFG00020005930 Dingo MODERN SPECIES 372 ENSCAFG00020005654 OR13G1 (ENSCAFG00020005659) OR6F1 (ENSCAFG00020005660) ENSCAFG00020005667 JMJD4 (ENSCAFG00020005670) #11 SNAP47 (ENSCAFG00020005687) #12 PRSS38 (ENSCAFG00020005690) #13 WNT9A (ENSCAFG00020005694) #14 WNT3A (ENSCAFG00020005706) #15 ARF1 (ENSCAFG00020005724) #16 ENSCAFG00020005738 #17 MRPL55 (ENSCAFG00020005742) #18 ENSCAFG00020005747 #19 IBA57 (ENSCAFG00020005762) #21 ENSCAFG00020005770 #22 ENSCAFG00020005782 #22 ENSCAFG00020005800 #22 ENSCAFG00020005812 #22 ENSCAFG00020005814 #22 ENSCAFG00020005817 #22 ENSCAFG00020005824 #22 TRIM11 (ENSCAFG00020005850) #23 TRIM17 (ENSCAFG00020005854) #24 ENSCAFG00020005861 H2BC26 (ENSCAFG00020005888) #26 ENSCAFG00020005896 ##26 RNF187 (ENSCAFG00020005898) #27 ENSCAFG00020005906 #28 ENSCAFG00020005924 #28 ENSCAFG00020005930 Dingo MODERN SPECIES 372 OR13G1 (ENSCAFG00020005659) OR6F1 (ENSCAFG00020005660) ENSCAFG00020005667 JMJD4 (ENSCAFG00020005670) #11 SNAP47 (ENSCAFG00020005687) #12 PRSS38 (ENSCAFG00020005690) #13 WNT9A (ENSCAFG00020005694) #14 WNT3A (ENSCAFG00020005706) #15 ARF1 (ENSCAFG00020005724) #16 ENSCAFG00020005738 #17 MRPL55 (ENSCAFG00020005742) #18 ENSCAFG00020005747 #19 IBA57 (ENSCAFG00020005762) #21 ENSCAFG00020005770 #22 ENSCAFG00020005782 #22 ENSCAFG00020005800 #22 ENSCAFG00020005812 #22 ENSCAFG00020005814 #22 ENSCAFG00020005817 #22 ENSCAFG00020005824 #22 TRIM11 (ENSCAFG00020005850) #23 TRIM17 (ENSCAFG00020005854) #24 ENSCAFG00020005861 H2BC26 (ENSCAFG00020005888) #26 ENSCAFG00020005896 ##26 RNF187 (ENSCAFG00020005898) #27 ENSCAFG00020005906 #28 ENSCAFG00020005924 #28 ENSCAFG00020005930 Dingo MODERN SPECIES 372 OR6F1 (ENSCAFG00020005660) ENSCAFG00020005667 JMJD4 (ENSCAFG00020005670) #11 SNAP47 (ENSCAFG00020005687) #12 PRSS38 (ENSCAFG00020005690) #13 WNT9A (ENSCAFG00020005694) #14 WNT3A (ENSCAFG00020005706) #15 ARF1 (ENSCAFG00020005724) #16 ENSCAFG00020005738 #17 MRPL55 (ENSCAFG00020005742) #18 ENSCAFG00020005747 #19 IBA57 (ENSCAFG00020005762) #21 ENSCAFG00020005770 #22 ENSCAFG00020005782 #22 ENSCAFG00020005800 #22 ENSCAFG00020005812 #22 ENSCAFG00020005814 #22 ENSCAFG00020005817 #22 ENSCAFG00020005824 #22 TRIM11 (ENSCAFG00020005850) #23 TRIM17 (ENSCAFG00020005854) #24 ENSCAFG00020005861 H2BC26 (ENSCAFG00020005888) #26 ENSCAFG00020005896 ##26 RNF187 (ENSCAFG00020005898) #27 ENSCAFG00020005906 #28 ENSCAFG00020005924 #28 ENSCAFG00020005930 Dog DUPLICATION Dog DUPLICATION Dog MODERN SPECIES 5 ENSCAFG00845008246 JMJD4 (ENSCAFG00845008215) #11 SNAP47 (ENSCAFG00845008129) #12 PRSS38 (ENSCAFG00845008050) #13 WNT9A (ENSCAFG00845008006) #14 WNT3A (ENSCAFG00845007960) #15 ARF1 (ENSCAFG00845007924) #16 C1orf35 (ENSCAFG00845007876) #17 MRPL55 (ENSCAFG00845007834) #18 GUK1 (ENSCAFG00845007785) #19 GJC2 (ENSCAFG00845007738) #20 IBA57 (ENSCAFG00845007710) #21 ENSCAFG00845007646 #22 ENSCAFG00845007619 #22 ENSCAFG00845007586 #22 ENSCAFG00845007457 #22 TRIM17 (ENSCAFG00845007329) #23 HIST3H2A (ENSCAFG00845007204) #25 H2BC26 (ENSCAFG00845007167) #26 ENSCAFG00845007128 ##26 ENSCAFG00845007077 #27 ENSCAFG00845006991 #28 ENSCAFG00845006907 #28 ENSCAFG00845006866 #12 ENSCAFG00845006842 ENSCAFG00845006817 Dog MODERN SPECIES 5 ENSCAFG00845008271 ENSCAFG00845008246 JMJD4 (ENSCAFG00845008215) #11 SNAP47 (ENSCAFG00845008129) #12 PRSS38 (ENSCAFG00845008050) #13 WNT9A (ENSCAFG00845008006) #14 WNT3A (ENSCAFG00845007960) #15 ARF1 (ENSCAFG00845007924) #16 C1orf35 (ENSCAFG00845007876) #17 MRPL55 (ENSCAFG00845007834) #18 GUK1 (ENSCAFG00845007785) #19 GJC2 (ENSCAFG00845007738) #20 IBA57 (ENSCAFG00845007710) #21 ENSCAFG00845007646 #22 ENSCAFG00845007619 #22 ENSCAFG00845007586 #22 ENSCAFG00845007457 #22 TRIM17 (ENSCAFG00845007329) #23 HIST3H2A (ENSCAFG00845007204) #25 H2BC26 (ENSCAFG00845007167) #26 ENSCAFG00845007128 ##26 ENSCAFG00845007077 #27 ENSCAFG00845006991 #28 ENSCAFG00845006907 #28 ENSCAFG00845006866 #12 ENSCAFG00845006842 ENSCAFG00845006817 Dog MODERN SPECIES 5 ENSCAFG00845008294 ENSCAFG00845008271 ENSCAFG00845008246 JMJD4 (ENSCAFG00845008215) #11 SNAP47 (ENSCAFG00845008129) #12 PRSS38 (ENSCAFG00845008050) #13 WNT9A (ENSCAFG00845008006) #14 WNT3A (ENSCAFG00845007960) #15 ARF1 (ENSCAFG00845007924) #16 C1orf35 (ENSCAFG00845007876) #17 MRPL55 (ENSCAFG00845007834) #18 GUK1 (ENSCAFG00845007785) #19 GJC2 (ENSCAFG00845007738) #20 IBA57 (ENSCAFG00845007710) #21 ENSCAFG00845007646 #22 ENSCAFG00845007619 #22 ENSCAFG00845007586 #22 ENSCAFG00845007457 #22 TRIM17 (ENSCAFG00845007329) #23 HIST3H2A (ENSCAFG00845007204) #25 H2BC26 (ENSCAFG00845007167) #26 ENSCAFG00845007128 ##26 ENSCAFG00845007077 #27 ENSCAFG00845006991 #28 ENSCAFG00845006907 #28 ENSCAFG00845006866 #12 ENSCAFG00845006842 ENSCAFG00845006817 Caniformia_b DUPLICATION Caniformia_b DUPLICATION Caniformia_b ANCESTRAL SPECIES ENSGT00940000154756.A.gd.a #22 Mustelinae ANCESTRAL SPECIES ENSGT00940000154756.A.gd.a #22 Ferret MODERN SPECIES 525 JMJD4 (ENSMPUG00000000927) #11 SNAP47 (ENSMPUG00000000929) #12 PRSS38 (ENSMPUG00000000932) #13 WNT9A (ENSMPUG00000000947) #14 WNT3A (ENSMPUG00000000960) #15 ARF1 (ENSMPUG00000000962) #16 C1orf35 (ENSMPUG00000000996) #17 MRPL55 (ENSMPUG00000001004) #18 GUK1 (ENSMPUG00000001011) #19 IBA57 (ENSMPUG00000001035) #21 ENSMPUG00000001039 #22 ENSMPUG00000001077 #22 ENSMPUG00000001079 TRIM11 (ENSMPUG00000001081) #23 H3-4 (ENSMPUG00000018529) H2AC25 (ENSMPUG00000018534) #25 H2BC26 (ENSMPUG00000018539) #26 ENSMPUG00000001083 ##26 ENSMPUG00000001085 #27 ENSMPUG00000001088 #28 ENSMPUG00000018546 ENSMPUG00000001090 ENSMPUG00000001091 Caniformia_b ANCESTRAL SPECIES 41 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.gd.b #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT01030000234553.b.b.d.c.a.d Mustelinae ANCESTRAL SPECIES 159 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A.gd.b #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT01030000234553.b.b.d.c.a.d American mink DUPLICATION American mink MODERN SPECIES 522 JMJD4 (ENSNVIG00000023741) #11 SNAP47 (ENSNVIG00000023746) #12 PRSS38 (ENSNVIG00000023749) #13 WNT9A (ENSNVIG00000023751) #14 WNT3A (ENSNVIG00000023755) #15 ARF1 (ENSNVIG00000000852) #16 C1orf35 (ENSNVIG00000000876) #17 MRPL55 (ENSNVIG00000000896) #18 GUK1 (ENSNVIG00000000938) #19 GJC2 (ENSNVIG00000001001) #20 IBA57 (ENSNVIG00000001008) #21 ENSNVIG00000001052 #22 ENSNVIG00000001101 #22 TRIM11 (ENSNVIG00000001136) #23 TRIM17 (ENSNVIG00000001165) #24 H3-4 (ENSNVIG00000001199) H2AC25 (ENSNVIG00000001203) #25 H2BC26 (ENSNVIG00000001207) #26 ENSNVIG00000001218 ##26 American mink MODERN SPECIES 522 JMJD4 (ENSNVIG00000023741) #11 SNAP47 (ENSNVIG00000023746) #12 PRSS38 (ENSNVIG00000023749) #13 WNT9A (ENSNVIG00000023751) #14 WNT3A (ENSNVIG00000023755) #15 ARF1 (ENSNVIG00000000852) #16 C1orf35 (ENSNVIG00000000876) #17 MRPL55 (ENSNVIG00000000896) #18 GUK1 (ENSNVIG00000000938) #19 GJC2 (ENSNVIG00000001001) #20 IBA57 (ENSNVIG00000001008) #21 ENSNVIG00000001052 #22 ENSNVIG00000001101 #22 TRIM11 (ENSNVIG00000001136) #23 TRIM17 (ENSNVIG00000001165) #24 H3-4 (ENSNVIG00000001199) H2AC25 (ENSNVIG00000001203) #25 H2BC26 (ENSNVIG00000001207) #26 ENSNVIG00000001218 ##26 Ferret MODERN SPECIES 525 JMJD4 (ENSMPUG00000000927) #11 SNAP47 (ENSMPUG00000000929) #12 PRSS38 (ENSMPUG00000000932) #13 WNT9A (ENSMPUG00000000947) #14 WNT3A (ENSMPUG00000000960) #15 ARF1 (ENSMPUG00000000962) #16 C1orf35 (ENSMPUG00000000996) #17 MRPL55 (ENSMPUG00000001004) #18 GUK1 (ENSMPUG00000001011) #19 IBA57 (ENSMPUG00000001035) #21 ENSMPUG00000001039 #22 ENSMPUG00000001077 #22 ENSMPUG00000001079 TRIM11 (ENSMPUG00000001081) #23 H3-4 (ENSMPUG00000018529) H2AC25 (ENSMPUG00000018534) #25 H2BC26 (ENSMPUG00000018539) #26 ENSMPUG00000001083 ##26 ENSMPUG00000001085 #27 ENSMPUG00000001088 #28 ENSMPUG00000018546 ENSMPUG00000001090 ENSMPUG00000001091 Ursidae ANCESTRAL SPECIES 59 ENSGT01030000234553.b.b.d.c.a.d ENSGT00940000163997 #28 ENSGT00390000009510 #27 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263514.A.e.b ENSGT00940000162155 #24 ENSGT00940000160371 #23 ENSGT00940000154756.A.hd #22 ENSGT00390000006465 #21 ENSGT00940000154756.A.gd.b #22 ENSGT00940000155815 #19 ENSGT00390000010309.a #18 ENSGT00390000005590 #17 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00940000160510 #15 ENSGT00940000159618 #14 ENSGT00940000154494.a #13 ENSGT00950000182843.b #12 ENSGT00940000159380 #11 Ursus ANCESTRAL SPECIES ENSGT00940000154756.A.gd.b #22 Polar bear DUPLICATION Polar bear MODERN SPECIES 314 JMJD4 (ENSUMAG00000001003) #11 ENSUMAG00000000990 SNAP47 (ENSUMAG00000000986) #12 PRSS38 (ENSUMAG00000000967) #13 WNT9A (ENSUMAG00000000953) #14 WNT3A (ENSUMAG00000000923) #15 ARF1 (ENSUMAG00000000918) #16 MRPL55 (ENSUMAG00000000905) #18 GUK1 (ENSUMAG00000000901) #19 ENSUMAG00000000883 #22 ENSUMAG00000000847 #22 TRIM17 (ENSUMAG00000000819) #24 ENSUMAG00000000803 ENSUMAG00000000792 H2BC26 (ENSUMAG00000000733) #26 ENSUMAG00000000715 ##26 ENSUMAG00000000704 #27 ENSUMAG00000000672 #28 ENSUMAG00000000653 #28 ENSUMAG00000000615 Polar bear MODERN SPECIES 314 JMJD4 (ENSUMAG00000001003) #11 ENSUMAG00000000990 SNAP47 (ENSUMAG00000000986) #12 PRSS38 (ENSUMAG00000000967) #13 WNT9A (ENSUMAG00000000953) #14 WNT3A (ENSUMAG00000000923) #15 ARF1 (ENSUMAG00000000918) #16 MRPL55 (ENSUMAG00000000905) #18 GUK1 (ENSUMAG00000000901) #19 ENSUMAG00000000883 #22 ENSUMAG00000000847 #22 TRIM17 (ENSUMAG00000000819) #24 ENSUMAG00000000803 ENSUMAG00000000792 H2BC26 (ENSUMAG00000000733) #26 ENSUMAG00000000715 ##26 ENSUMAG00000000704 #27 ENSUMAG00000000672 #28 ENSUMAG00000000653 #28 ENSUMAG00000000615 Giant Panda MODERN SPECIES 13 ENSAMEG00000014310 #27 ENSAMEG00000024010 ENSAMEG00000028006 ##26 H2BC26 (ENSAMEG00000026668) #26 H2AW (ENSAMEG00000025465) #25 H3-4 (ENSAMEG00000031491) TRIM17 (ENSAMEG00000014312) #24 ENSAMEG00000023964 #23 ENSAMEG00000023921 #21 ENSAMEG00000016258 #22 ENSAMEG00000016280 #19 ENSAMEG00000016292 #18 C1orf35 (ENSAMEG00000016295) #17 ARF1 (ENSAMEG00000030995) #16 WNT3A (ENSAMEG00000004256) #15 WNT9A (ENSAMEG00000027387) #14 PRSS38 (ENSAMEG00000007189) #13 SNAP47 (ENSAMEG00000009252) #12 JMJD4 (ENSAMEG00000018153) #11 ENSAMEG00000029442 ENSAMEG00000030449 ENSAMEG00000029726 OR14C36 (ENSAMEG00000013199) ENSAMEG00000028922 ENSAMEG00000019418 Caniformia_b ANCESTRAL SPECIES ENSGT00940000154756.A.hd #22 Ursidae ANCESTRAL SPECIES 59 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309.a #18 ENSGT00940000155815 #19 ENSGT00940000154756.A.gd.b #22 ENSGT00390000006465 #21 ENSGT00940000154756.A.hd #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT01030000234553.b.b.d.c.a.d Ursus ANCESTRAL SPECIES 192 ENSGT00940000159380 #11 ENSGT00940000169575 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309.a #18 ENSGT00940000155815 #19 ENSGT00390000006465 #21 ENSGT00940000154756.A.hd #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.f ENSGT01020000230360.c.b.a.b.b.d ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT01030000234553.b.b.d.c.a.d American black bear MODERN SPECIES 2400 ENSUAMG00000013620 #22 TRIM11 (ENSUAMG00000013614) #23 TRIM17 (ENSUAMG00000013611) #24 ENSUAMG00000013599 H2AC25 (ENSUAMG00000013568) #25 H2BC26 (ENSUAMG00000013549) #26 ENSUAMG00000013542 ##26 ENSUAMG00000013539 #27 Laurasiatheria_c ANCESTRAL SPECIES 29 ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT01030000234553.b.b.d.c.a Equus ANCESTRAL SPECIES 6 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997.m #28 ENSGT01030000234553.b.b.d.d ENSGT00940000161967 ENSGT00940000162415 ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.b ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b.c.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b.c.b ENSGT00940000158134.A ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b ENSGT01060000248581.C.a.b.a.a Horse MODERN SPECIES 5 JMJD4 (ENSECAG00000021407) #11 SNAP47 (ENSECAG00000020954) #12 PRSS38 (ENSECAG00000020942) #13 WNT9A (ENSECAG00000020178) #14 WNT3A (ENSECAG00000028812) #15 ARF1 (ENSECAG00000032327) #16 GUK1 (ENSECAG00000019280) #19 ENSECAG00000059239 #17 GJC2 (ENSECAG00000037673) #20 IBA57 (ENSECAG00000006335) #21 OBSCN (ENSECAG00000016720) #22 TRIM11 (ENSECAG00000016373) #23 TRIM17 (ENSECAG00000039891) #24 ENSECAG00000059949 ##26 H2BC26 (ENSECAG00000048080) #26 RNF187 (ENSECAG00000016200) #27 ENSECAG00000040368 #28 ENSECAG00000032464 #28 ENSECAG00000033206 ZNF496 (ENSECAG00000015844) NLRP3 (ENSECAG00000015382) OR2B11 (ENSECAG00000002900) OR2W29 (ENSECAG00000001770) OR2C3F (ENSECAG00000031551) OR2C3 (ENSECAG00000036826) OR2C3D (ENSECAG00000028047) Donkey MODERN SPECIES 29 JMJD4 (ENSEASG00005017516) #11 SNAP47 (ENSEASG00005017519) #12 ENSEASG00005023983 PRSS38 (ENSEASG00005017526) #13 WNT9A (ENSEASG00005017530) #14 WNT3A (ENSEASG00005010564) #15 ENSEASG00005036953 C1orf35 (ENSEASG00005017537) #17 MRPL55 (ENSEASG00005024877) #18 GUK1 (ENSEASG00005017539) #19 GJC2 (ENSEASG00005017541) #20 ENSEASG00005033564 #21 OBSCN (ENSEASG00005017625) #22 TRIM11 (ENSEASG00005017954) #23 TRIM17 (ENSEASG00005017955) #24 ENSEASG00005035131 H2BC26 (ENSEASG00005026831) #26 ENSEASG00005029469 ENSEASG00005017961 #27 ENSEASG00005024868 #28 ENSEASG00005035367 #28 ENSEASG00005017951 ENSEASG00005017964 NLRP3 (ENSEASG00005017967) OR2B11 (ENSEASG00005017975) ENSEASG00005017978 ENSEASG00005038196 ENSEASG00005028368 #28 Chiroptera ANCESTRAL SPECIES 75 ENSGT00940000158134.A ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT01030000234553.b.b.d.c.a Megabat MODERN SPECIES 1486 OBSCN (ENSPVAG00000009411) #22 Microchiroptera ANCESTRAL SPECIES 63 ENSGT00940000158134.A ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT01030000234553.b.b.d.c.a Greater horseshoe bat MODERN SPECIES 16 GRM6 (ENSRFEG00010020725) ZNF454 (ENSRFEG00010020708) ZFP2 (ENSRFEG00010020696) ENSRFEG00010020667 JMJD4 (ENSRFEG00010020639) #11 SNAP47 (ENSRFEG00010020620) #12 PRSS38 (ENSRFEG00010020586) #13 WNT9A (ENSRFEG00010020564) #14 WNT3A (ENSRFEG00010020529) #15 ENSRFEG00010020502 #16 ENSRFEG00010020459 #17 MRPL55 (ENSRFEG00010020427) #18 ENSRFEG00010020344 #19 GJC2 (ENSRFEG00010020305) #20 IBA57 (ENSRFEG00010020284) #21 OBSCN (ENSRFEG00010012968) #22 TRIM11 (ENSRFEG00010012738) #23 TRIM17 (ENSRFEG00010012551) #24 H3-4 (ENSRFEG00010012529) H2AC25 (ENSRFEG00010012511) #25 RNF187 (ENSRFEG00010012412) #27 ENSRFEG00010012392 #28 ENSRFEG00010012356 ZNF496 (ENSRFEG00010012279) ENSRFEG00010012199 NLRP3 (ENSRFEG00010011921) OR2B11 (ENSRFEG00010011877) GCSAML (ENSRFEG00010011703) OR2G2 (ENSRFEG00010011520) OR2G3 (ENSRFEG00010011480) OR14K1 (ENSRFEG00010011310) Microbat DUPLICATION Microbat DUPLICATION Microbat MODERN SPECIES 1239 OR2B11 (ENSMLUG00000014384) NLRP3 (ENSMLUG00000014375) ZNF496 (ENSMLUG00000026878) ENSMLUG00000024170 #11 ENSMLUG00000009770 SNAP47 (ENSMLUG00000013515) #12 PRSS38 (ENSMLUG00000012972) #13 WNT9A (ENSMLUG00000013086) #14 ENSMLUG00000026050 #15 ENSMLUG00000007020 #16 MRPL55 (ENSMLUG00000007037) #18 GUK1 (ENSMLUG00000013049) #19 GJC2 (ENSMLUG00000006940) #20 IBA57 (ENSMLUG00000008724) #21 ENSMLUG00000025341 #22 ENSMLUG00000013117 #22 ENSMLUG00000027104 #22 TRIM11 (ENSMLUG00000009420) #23 RNF187 (ENSMLUG00000002610) #27 TRIM58 (ENSMLUG00000004402) OR2W3 (ENSMLUG00000005916) ENSMLUG00000027552 #37 SH3BP5L (ENSMLUG00000002392) #34 ZNF692 (ENSMLUG00000002398) #32 Microbat MODERN SPECIES 1239 OR2B11 (ENSMLUG00000014384) NLRP3 (ENSMLUG00000014375) ZNF496 (ENSMLUG00000026878) ENSMLUG00000024170 #11 ENSMLUG00000009770 SNAP47 (ENSMLUG00000013515) #12 PRSS38 (ENSMLUG00000012972) #13 WNT9A (ENSMLUG00000013086) #14 ENSMLUG00000026050 #15 ENSMLUG00000007020 #16 MRPL55 (ENSMLUG00000007037) #18 GUK1 (ENSMLUG00000013049) #19 GJC2 (ENSMLUG00000006940) #20 IBA57 (ENSMLUG00000008724) #21 ENSMLUG00000025341 #22 ENSMLUG00000013117 #22 ENSMLUG00000027104 #22 TRIM11 (ENSMLUG00000009420) #23 RNF187 (ENSMLUG00000002610) #27 TRIM58 (ENSMLUG00000004402) OR2W3 (ENSMLUG00000005916) ENSMLUG00000027552 #37 SH3BP5L (ENSMLUG00000002392) #34 ZNF692 (ENSMLUG00000002398) #32 Microbat MODERN SPECIES 1239 NLRP3 (ENSMLUG00000014375) ZNF496 (ENSMLUG00000026878) ENSMLUG00000024170 #11 ENSMLUG00000009770 SNAP47 (ENSMLUG00000013515) #12 PRSS38 (ENSMLUG00000012972) #13 WNT9A (ENSMLUG00000013086) #14 ENSMLUG00000026050 #15 ENSMLUG00000007020 #16 MRPL55 (ENSMLUG00000007037) #18 GUK1 (ENSMLUG00000013049) #19 GJC2 (ENSMLUG00000006940) #20 IBA57 (ENSMLUG00000008724) #21 ENSMLUG00000025341 #22 ENSMLUG00000013117 #22 ENSMLUG00000027104 #22 TRIM11 (ENSMLUG00000009420) #23 RNF187 (ENSMLUG00000002610) #27 TRIM58 (ENSMLUG00000004402) OR2W3 (ENSMLUG00000005916) ENSMLUG00000027552 #37 SH3BP5L (ENSMLUG00000002392) #34 ZNF692 (ENSMLUG00000002398) #32 Eulipotyphla ANCESTRAL SPECIES 2563 ENSGT00940000154756.A #22 ENSGT00390000016274 Common shrew DUPLICATION Common shrew MODERN SPECIES 3800 ENSSARG00000009329 #22 ENSSARG00000009473 #22 Common shrew MODERN SPECIES 3800 ENSSARG00000009329 #22 ENSSARG00000009473 #22 Hedgehog MODERN SPECIES 5498 ENSEEUG00000012792 #22 ENSEEUG00000013297 Euarchontoglires ANCESTRAL SPECIES 25 ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Primates ANCESTRAL SPECIES 30 ENSGT01090000260044.A.b.a.a.a.b ENSGT01100000263548.b.a.a.a.a.a ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Strepsirrhini ANCESTRAL SPECIES 52 ENSGT00940000164205 ENSGT01100000263507.D.a.a.b.b.b.b.b ENSGT00940000153165.a.a.d.j ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Bushbaby MODERN SPECIES 400 ENSOGAG00000028076 ENSOGAG00000003566 JMJD4 (ENSOGAG00000004942) #11 SNAP47 (ENSOGAG00000004945) #12 PRSS38 (ENSOGAG00000026355) #13 WNT9A (ENSOGAG00000013474) #14 WNT3A (ENSOGAG00000013493) #15 ARF1 (ENSOGAG00000010974) #16 C1orf35 (ENSOGAG00000010978) #17 MRPL55 (ENSOGAG00000010981) #18 GUK1 (ENSOGAG00000029450) #19 GJC2 (ENSOGAG00000033132) #20 IBA57 (ENSOGAG00000009178) #21 ENSOGAG00000030331 #22 TRIM11 (ENSOGAG00000009216) #23 TRIM17 (ENSOGAG00000009217) #24 H3-4 (ENSOGAG00000031879) H2AC25 (ENSOGAG00000009219) #25 H2BC26 (ENSOGAG00000009221) #26 ENSOGAG00000031086 ##26 RNF187 (ENSOGAG00000011214) #27 ENSOGAG00000030822 Lemuriformes ANCESTRAL SPECIES 18 ENSGT00940000160555 ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Lemuriformes_a ANCESTRAL SPECIES 88 ENSGT00940000160555 ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT00940000159259.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 769 ENSPSMG00000013201 #15 ARF1 (ENSPSMG00000013226) #16 C1orf35 (ENSPSMG00000013245) #17 MRPL55 (ENSPSMG00000013256) #18 GUK1 (ENSPSMG00000013269) #19 GJC2 (ENSPSMG00000013273) #20 IBA57 (ENSPSMG00000013279) #21 ENSPSMG00000013283 #22 ENSPSMG00000013289 #22 TRIM11 (ENSPSMG00000013308) #23 TRIM17 (ENSPSMG00000013322) #24 ENSPSMG00000013327 ENSPSMG00000013337 ##25 H2BC26 (ENSPSMG00000013352) #26 ENSPSMG00000013365 ##26 Greater bamboo lemur MODERN SPECIES 769 ENSPSMG00000013201 #15 ARF1 (ENSPSMG00000013226) #16 C1orf35 (ENSPSMG00000013245) #17 MRPL55 (ENSPSMG00000013256) #18 GUK1 (ENSPSMG00000013269) #19 GJC2 (ENSPSMG00000013273) #20 IBA57 (ENSPSMG00000013279) #21 ENSPSMG00000013283 #22 ENSPSMG00000013289 #22 TRIM11 (ENSPSMG00000013308) #23 TRIM17 (ENSPSMG00000013322) #24 ENSPSMG00000013327 ENSPSMG00000013337 ##25 H2BC26 (ENSPSMG00000013352) #26 ENSPSMG00000013365 ##26 Coquerels sifaka MODERN SPECIES 234 PARP4 (ENSPCOG00000022852) CENPJ (ENSPCOG00000016218) RNF17 (ENSPCOG00000020211) ATP12A (ENSPCOG00000025271) ENSPCOG00000024700 JMJD4 (ENSPCOG00000019446) #11 SNAP47 (ENSPCOG00000012484) #12 PRSS38 (ENSPCOG00000019582) #13 WNT9A (ENSPCOG00000015468) #14 WNT3A (ENSPCOG00000024931) #15 ARF1 (ENSPCOG00000026770) #16 C1orf35 (ENSPCOG00000025028) #17 MRPL55 (ENSPCOG00000013827) #18 GUK1 (ENSPCOG00000009766) #19 IBA57 (ENSPCOG00000028589) #21 OBSCN (ENSPCOG00000028285) #22 TRIM11 (ENSPCOG00000016532) #23 TRIM17 (ENSPCOG00000026287) #24 H3-4 (ENSPCOG00000026493) H2AC25 (ENSPCOG00000013826) #25 H2BC26 (ENSPCOG00000003934) #26 ENSPCOG00000005164 ##26 RNF187 (ENSPCOG00000002810) #27 ENSPCOG00000024361 ENSPCOG00000026534 Mouse lemur MODERN SPECIES 4 PARP4 (ENSMICG00000028028) CENPJ (ENSMICG00000010400) RNF17 (ENSMICG00000010364) ATP12A (ENSMICG00000007697) ENSMICG00000042765 JMJD4 (ENSMICG00000036474) #11 SNAP47 (ENSMICG00000029011) #12 PRSS38 (ENSMICG00000042943) #13 WNT9A (ENSMICG00000047095) #14 WNT3A (ENSMICG00000010671) #15 ARF1 (ENSMICG00000047362) #16 C1orf35 (ENSMICG00000027688) #17 MRPL55 (ENSMICG00000031760) #18 GUK1 (ENSMICG00000003322) #19 IBA57 (ENSMICG00000041871) #21 OBSCN (ENSMICG00000000557) #22 TRIM11 (ENSMICG00000029090) #23 TRIM17 (ENSMICG00000013315) #24 H3-4 (ENSMICG00000045112) H2AC25 (ENSMICG00000044054) #25 H2BC26 (ENSMICG00000041996) #26 ENSMICG00000048090 ##26 ENSMICG00000038421 ENSMICG00000046509 ENSMICG00000045969 ENSMICG00000026371 ENSMICG00000026956 ENSMICG00000047302 MCF2L (ENSMICG00000033069) F7 (ENSMICG00000032148) F10 (ENSMICG00000028391) Haplorrhini ANCESTRAL SPECIES 46 ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Tarsier MODERN SPECIES 5065 ZNF669 (ENSTSYG00000003204) ENSTSYG00000034800 ENSTSYG00000002726 ENSTSYG00000028507 JMJD4 (ENSTSYG00000000484) #11 SNAP47 (ENSTSYG00000034505) #12 PRSS38 (ENSTSYG00000011299) #13 WNT9A (ENSTSYG00000025543) #14 WNT3A (ENSTSYG00000027346) #15 ARF1 (ENSTSYG00000027538) #16 CUNH1orf35 (ENSTSYG00000031003) #17 MRPL55 (ENSTSYG00000002932) #18 GUK1 (ENSTSYG00000001325) #19 IBA57 (ENSTSYG00000014591) #21 ENSTSYG00000006833 OBSCN (ENSTSYG00000031392) #22 TRIM11 (ENSTSYG00000029832) #23 TRIM17 (ENSTSYG00000008473) #24 H3-4 (ENSTSYG00000037257) H2AC25 (ENSTSYG00000026130) #25 H2BC26 (ENSTSYG00000029005) #26 ENSTSYG00000036415 ##26 Simiiformes ANCESTRAL SPECIES 33 ENSGT00940000162415 ENSGT00940000161967 ENSGT00910000148176 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Catarrhini ANCESTRAL SPECIES 10 ENSGT00910000148176 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00390000017697.a.n ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Cercopithecidae ANCESTRAL SPECIES 20 ENSGT00940000153165.a.a.d.i.a ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00390000017697.a.n ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 Cercopithecinae ANCESTRAL SPECIES 18 ENSGT01090000260030.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00390000017697.a.n ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 Vervet Monkey MODERN SPECIES 17 COQ8A (ENSCSAG00000016382) CDC42BPA (ENSCSAG00000016402) ENSCSAG00000016411 JMJD4 (ENSCSAG00000016420) #11 SNAP47 (ENSCSAG00000016423) #12 PRSS38 (ENSCSAG00000016434) #13 WNT9A (ENSCSAG00000016440) #14 WNT3A (ENSCSAG00000016455) #15 ARF1 (ENSCSAG00000016460) #16 C1orf35 (ENSCSAG00000016465) #17 MRPL55 (ENSCSAG00000016477) #18 GUK1 (ENSCSAG00000016494) #19 GJC2 (ENSCSAG00000000269) #20 IBA57 (ENSCSAG00000016503) #21 ENSCSAG00000000270 OBSCN (ENSCSAG00000016528) #22 TRIM11 (ENSCSAG00000016542) #23 TRIM17 (ENSCSAG00000016546) #24 H2AC25 (ENSCSAG00000000271) #25 H2BC26 (ENSCSAG00000000272) #26 ENSCSAG00000000273 ##26 RNF187 (ENSCSAG00000016553) #27 Cercopithecinae_a DUPLICATION Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000154756.A.uc #22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000154756.A.uc #22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000154756.A.uc #22 Sooty mangabey MODERN SPECIES 269 SNAP47 (ENSCATG00000017110) #12 ENSCATG00000032383 PRSS38 (ENSCATG00000028007) #13 WNT9A (ENSCATG00000037437) #14 WNT3A (ENSCATG00000024249) #15 ENSCATG00000026444 ENSCATG00000034162 #16 C1orf35 (ENSCATG00000036828) #17 MRPL55 (ENSCATG00000001114) #18 ENSCATG00000030372 #19 GJC2 (ENSCATG00000043427) #20 IBA57 (ENSCATG00000033547) #21 ENSCATG00000033121 ENSCATG00000015518 #22 ENSCATG00000018563 ENSCATG00000028342 #22 TRIM11 (ENSCATG00000037992) #23 TRIM17 (ENSCATG00000004723) #24 H3-4 (ENSCATG00000015110) H2AC25 (ENSCATG00000019930) #25 H2BC26 (ENSCATG00000043414) #26 ENSCATG00000016310 ##26 ENSCATG00000036222 #27 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00910000148086 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b.`b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00390000017697.a.n ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A.vc #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00390000013340 ENSGT00550000076417 ENSGT00940000154842.a.b ENSGT00940000153464.A.b.a ENSGT00940000157769 ENSGT00940000168189 ENSGT00940000163577 ENSGT00510000046975.b.t Macaca ANCESTRAL SPECIES ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00910000148086 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b.`b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00390000017697.a.n ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A.vc #22 ENSGT00440000034918.q.a.a.a.d.l.a.b ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00390000013340 ENSGT00940000154842.a.b ENSGT00940000153464.A.b.a ENSGT00940000157769 ENSGT00940000163577 ENSGT00510000046975.b.t ENSGT00390000007598 Pig-tailed macaque MODERN SPECIES 288 WNT9A (ENSMNEG00000028905) #14 WNT3A (ENSMNEG00000037152) #15 ENSMNEG00000038219 ARF1 (ENSMNEG00000037278) #16 C1orf35 (ENSMNEG00000029724) #17 MRPL55 (ENSMNEG00000036387) #18 ENSMNEG00000035833 ENSMNEG00000028444 #19 GJC2 (ENSMNEG00000000224) #20 IBA57 (ENSMNEG00000037320) #21 ENSMNEG00000033684 OBSCN (ENSMNEG00000039875) #22 ENSMNEG00000022017 TRIM11 (ENSMNEG00000029145) #23 TRIM17 (ENSMNEG00000033783) #24 H3-4 (ENSMNEG00000018662) H2AC25 (ENSMNEG00000011405) #25 H2BC26 (ENSMNEG00000007106) #26 ENSMNEG00000023271 ##26 RNF187 (ENSMNEG00000041115) #27 Cercopithecinae_b ANCESTRAL SPECIES 3 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00910000148086 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b.`b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00440000034918.q.a.a.a.d.l.a.b ENSGT00390000016274 ENSGT00940000154756.A.vc #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510.a #27 ENSGT00390000013340 ENSGT00550000076417 ENSGT00940000154842.a.b ENSGT00940000153464.A.b.a ENSGT00940000157769 ENSGT00940000168189 ENSGT00940000163577 ENSGT00510000046975.b.t Olive baboon MODERN SPECIES CDC42BPA (ENSPANG00000007777) ENSPANG00000048983 ENSPANG00000048924 JMJD4 (ENSPANG00000031507) #11 SNAP47 (ENSPANG00000017951) #12 PRSS38 (ENSPANG00000024006) #13 WNT9A (ENSPANG00000048565) #14 WNT3A (ENSPANG00000019711) #15 ENSPANG00000004523 #16 C1orf35 (ENSPANG00000009889) #17 MRPL55 (ENSPANG00000017717) #18 ENSPANG00000020945 #19 GJC2 (ENSPANG00000035104) #20 IBA57 (ENSPANG00000021033) #21 ENSPANG00000030630 ENSPANG00000035184 #22 TRIM11 (ENSPANG00000004478) #23 TRIM17 (ENSPANG00000014849) #24 H3-4 (ENSPANG00000032788) H2AC25 (ENSPANG00000039633) #25 H2BC26 (ENSPANG00000042066) #26 ENSPANG00000050063 ##26 HSD17B7 (ENSPANG00000026079) ENSPANG00000045838 DDR2 (ENSPANG00000011453) ENSPANG00000046218 UAP1 (ENSPANG00000001322) UHMK1 (ENSPANG00000001321) SH2D1B (ENSPANG00000041929) SPATA46 (ENSPANG00000004524) ENSPANG00000023226 Cercopithecinae_d ANCESTRAL SPECIES 160 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00910000148086 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b.`b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00440000034918.q.a.a.a.d.l.a.b ENSGT00390000016274 ENSGT00940000154756.A.vc #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510.a #27 Sooty mangabey MODERN SPECIES 269 ENSCATG00000028870 JMJD4 (ENSCATG00000030697) #11 SNAP47 (ENSCATG00000017110) #12 ENSCATG00000032383 PRSS38 (ENSCATG00000028007) #13 WNT9A (ENSCATG00000037437) #14 WNT3A (ENSCATG00000024249) #15 ENSCATG00000026444 ENSCATG00000034162 #16 C1orf35 (ENSCATG00000036828) #17 MRPL55 (ENSCATG00000001114) #18 ENSCATG00000030372 #19 GJC2 (ENSCATG00000043427) #20 IBA57 (ENSCATG00000033547) #21 ENSCATG00000033121 ENSCATG00000015518 #22 ENSCATG00000018563 ENSCATG00000028342 #22 TRIM11 (ENSCATG00000037992) #23 TRIM17 (ENSCATG00000004723) #24 H3-4 (ENSCATG00000015110) H2AC25 (ENSCATG00000019930) #25 H2BC26 (ENSCATG00000043414) #26 ENSCATG00000016310 ##26 ENSCATG00000036222 #27 Drill MODERN SPECIES 1468 ZNF678 (ENSMLEG00000030111) ENSMLEG00000029152 JMJD4 (ENSMLEG00000038450) #11 SNAP47 (ENSMLEG00000028118) #12 PRSS38 (ENSMLEG00000031236) #13 WNT9A (ENSMLEG00000041830) #14 WNT3A (ENSMLEG00000034108) #15 ENSMLEG00000010724 ARF1 (ENSMLEG00000040308) #16 C1orf35 (ENSMLEG00000044367) #17 MRPL55 (ENSMLEG00000043407) #18 ENSMLEG00000033820 #19 IBA57 (ENSMLEG00000035651) #21 ENSMLEG00000000202 OBSCN (ENSMLEG00000039921) #22 TRIM11 (ENSMLEG00000035665) #23 TRIM17 (ENSMLEG00000036683) #24 H3-4 (ENSMLEG00000027834) H2AC25 (ENSMLEG00000019082) #25 H2BC26 (ENSMLEG00000011931) #26 ENSMLEG00000027649 ##26 Rhinopithecus ANCESTRAL SPECIES 247 ENSGT00390000012563.m.b.b ENSGT00910000147389 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 Black snub-nosed monkey MODERN SPECIES 736 WNT9A (ENSRBIG00000036258) #14 WNT3A (ENSRBIG00000039877) #15 ENSRBIG00000040413 ARF1 (ENSRBIG00000043809) #16 C1orf35 (ENSRBIG00000032408) #17 MRPL55 (ENSRBIG00000038180) #18 ENSRBIG00000030901 #19 GJC2 (ENSRBIG00000039202) #20 IBA57 (ENSRBIG00000042111) #21 ENSRBIG00000031054 OBSCN (ENSRBIG00000044496) #22 TRIM11 (ENSRBIG00000027735) #23 TRIM17 (ENSRBIG00000017974) #24 H3-4 (ENSRBIG00000029468) H2AC25 (ENSRBIG00000024183) #25 H2BC26 (ENSRBIG00000013451) #26 ENSRBIG00000029298 ##26 Golden snub-nosed monkey MODERN SPECIES 1428 OBSCN (ENSRROG00000044144) #22 TRIM11 (ENSRROG00000036560) #23 TRIM17 (ENSRROG00000035878) #24 H3-4 (ENSRROG00000010623) H2AC25 (ENSRROG00000007919) #25 H2BC26 (ENSRROG00000024891) #26 ENSRROG00000023607 ##26 RNF187 (ENSRROG00000024808) #27 Hominoidea ANCESTRAL SPECIES 7 ENSGT00910000147389 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00390000017697.a.n ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00940000156644 ENSGT00910000146652 ENSGT00940000157464 ENSGT00500000045533 ENSGT00390000003512 ENSGT00940000156048.b ENSGT00390000011529 Gibbon MODERN SPECIES 20 CDC42BPA (ENSNLEG00000013980) ZNF678 (ENSNLEG00000008917) ENSNLEG00000031801 JMJD4 (ENSNLEG00000032639) #11 SNAP47 (ENSNLEG00000014097) #12 PRSS38 (ENSNLEG00000014112) #13 WNT9A (ENSNLEG00000014116) #14 WNT3A (ENSNLEG00000014118) #15 ENSNLEG00000029254 ARF1 (ENSNLEG00000014137) #16 ENSNLEG00000033210 #17 ENSNLEG00000014215 #18 ENSNLEG00000014235 #19 IBA57 (ENSNLEG00000014263) #21 ENSNLEG00000033321 ENSNLEG00000014265 #22 TRIM11 (ENSNLEG00000014315) #23 TRIM17 (ENSNLEG00000014332) #24 H3-4 (ENSNLEG00000031785) H2AC25 (ENSNLEG00000033352) #25 H2BC26 (ENSNLEG00000033656) #26 ENSNLEG00000029943 ##26 RHOU (ENSNLEG00000027920) ENSNLEG00000027599 RAB4A (ENSNLEG00000014339) ENSNLEG00000032941 ENSNLEG00000014345 ACTA1 (ENSNLEG00000014347) NUP133 (ENSNLEG00000014372) ABCB10 (ENSNLEG00000014442) TAF5L (ENSNLEG00000014446) Hominidae ANCESTRAL SPECIES 6 ENSGT00940000154251.A.a.a.a ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00390000017697.a.n ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00940000156644 ENSGT00940000157464 ENSGT00390000003512 ENSGT00940000156048.b ENSGT00390000011529 ENSGT00910000148069 ENSGT00940000157680 Orangutan MODERN SPECIES COQ8A (ENSPPYG00000000159) CDC42BPA (ENSPPYG00000000158) ENSPPYG00000000155 JMJD4 (ENSPPYG00000000154) #11 SNAP47 (ENSPPYG00000000153) #12 PRSS38 (ENSPPYG00000000152) #13 WNT9A (ENSPPYG00000000151) #14 WNT3A (ENSPPYG00000000150) #15 ENSPPYG00000000149 ARF1 (ENSPPYG00000000148) #16 C1orf35 (ENSPPYG00000000147) #17 ENSPPYG00000000146 #18 ENSPPYG00000000145 #19 GJC2 (ENSPPYG00000000144) #20 IBA57 (ENSPPYG00000039751) #21 ENSPPYG00000000139 #22 ENSPPYG00000000138 #23 TRIM17 (ENSPPYG00000000137) #24 H3-4 (ENSPPYG00000000136) H2AC25 (ENSPPYG00000030037) #25 H2BC26 (ENSPPYG00000039326) #26 ENSPPYG00000040985 ##26 RNF187 (ENSPPYG00000041257) #27 ENSPPYG00000000133 #28 ENSPPYG00000000131 RHOU (ENSPPYG00000000130) RAB4A (ENSPPYG00000000128) CCSAP (ENSPPYG00000039997) ACTA1 (ENSPPYG00000000127) NUP133 (ENSPPYG00000000126) ABCB10 (ENSPPYG00000000125) Homo/Pan/Gorilla group ANCESTRAL SPECIES 6 ENSGT00940000159380 #11 ENSGT00910000147389 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00390000017697.a.n ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000156644 ENSGT00940000157464 ENSGT00390000003512 ENSGT00940000156048.b ENSGT00390000011529 ENSGT00910000148069 ENSGT00940000157680 ENSGT00940000153342.b.w Homo/Pan group ANCESTRAL SPECIES 7 ENSGT00940000159380 #11 ENSGT00910000147389 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00390000017697.a.n ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000156644 ENSGT00940000157464 ENSGT00390000003512 ENSGT00940000156048.b ENSGT00390000011529 ENSGT00910000148069 ENSGT00940000157680 ENSGT00940000153342.b.w Pan ANCESTRAL SPECIES ENSGT00940000159380 #11 ENSGT00910000147389 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00860000136121 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00390000017697.a.n ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000156644 ENSGT00940000157464 ENSGT00390000003512 ENSGT00940000156048.b ENSGT00390000011529 ENSGT00910000148069 ENSGT00940000157680 ENSGT00940000153342.b.w Bonobo MODERN SPECIES ENSPPAG00000042694 JMJD4 (ENSPPAG00000041921) #11 ENSPPAG00000043934 SNAP47 (ENSPPAG00000030087) #12 PRSS38 (ENSPPAG00000029608) #13 WNT9A (ENSPPAG00000040433) #14 WNT3A (ENSPPAG00000033514) #15 ENSPPAG00000003062 ARF1 (ENSPPAG00000029612) #16 ENSPPAG00000031412 #17 ENSPPAG00000030545 #18 ENSPPAG00000030143 ENSPPAG00000031110 #19 ENSPPAG00000034125 #21 ENSPPAG00000037707 OBSCN (ENSPPAG00000039604) #22 TRIM11 (ENSPPAG00000018913) #23 TRIM17 (ENSPPAG00000018691) #24 H3-4 (ENSPPAG00000020018) H2AC25 (ENSPPAG00000013459) #25 H2BC26 (ENSPPAG00000025721) #26 ENSPPAG00000001893 ##26 ENSPPAG00000034335 RAB4A (ENSPPAG00000036595) ACTA1 (ENSPPAG00000033916) NUP133 (ENSPPAG00000035148) ENSPPAG00000025609 ABCB10 (ENSPPAG00000012448) TAF5L (ENSPPAG00000034307) URB2 (ENSPPAG00000040629) ENSPPAG00000004114 Chimpanzee MODERN SPECIES JMJD4 (ENSPTRG00000002059) #11 ENSPTRG00000048948 SNAP47 (ENSPTRG00000002060) #12 PRSS38 (ENSPTRG00000002061) #13 WNT9A (ENSPTRG00000002062) #14 WNT3A (ENSPTRG00000002064) #15 ENSPTRG00000046943 ARF1 (ENSPTRG00000002066) #16 C1H1orf35 (ENSPTRG00000002067) #17 MRPL55 (ENSPTRG00000002068) #18 ENSPTRG00000051540 GUK1 (ENSPTRG00000002069) #19 GJC2 (ENSPTRG00000002070) #20 IBA57 (ENSPTRG00000002072) #21 ENSPTRG00000002073 OBSCN (ENSPTRG00000046375) #22 TRIM11 (ENSPTRG00000002071) #23 TRIM17 (ENSPTRG00000002076) #24 H3-4 (ENSPTRG00000052362) H2AC25 (ENSPTRG00000047640) #25 H2BC26 (ENSPTRG00000050958) #26 ENSPTRG00000048372 H2BC27 (ENSPTRG00000049906) ##26 RNF187 (ENSPTRG00000002079) #27 RHOU (ENSPTRG00000045909) RAB4A (ENSPTRG00000002083) CCSAP (ENSPTRG00000002085) ACTA1 (ENSPTRG00000002086) NUP133 (ENSPTRG00000002088) ABCB10 (ENSPTRG00000002090) TAF5L (ENSPTRG00000002091) Human MODERN SPECIES PSEN2 (ENSG00000143801) COQ8A (ENSG00000163050) CDC42BPA (ENSG00000143776) ZNF678 (ENSG00000181450) SNAP47 (ENSG00000143740) #12 JMJD4 (ENSG00000081692) #11 PRSS38 (ENSG00000185888) #13 WNT9A (ENSG00000143816) #14 WNT3A (ENSG00000154342) #15 ARF1 (ENSG00000143761) #16 C1orf35 (ENSG00000143793) #17 MRPL55 (ENSG00000162910) #18 GUK1 (ENSG00000143774) #19 GJC2 (ENSG00000198835) #20 IBA57 (ENSG00000181873) #21 OBSCN (ENSG00000154358) #22 TRIM11 (ENSG00000154370) #23 TRIM17 (ENSG00000162931) #24 H3-4 (ENSG00000168148) H2AC25 (ENSG00000181218) #25 H2BC26 (ENSG00000196890) #26 RNF187 (ENSG00000168159) #27 RHOU (ENSG00000116574) RAB4A (ENSG00000168118) CCSAP (ENSG00000154429) ACTA1 (ENSG00000143632) NUP133 (ENSG00000069248) ABCB10 (ENSG00000135776) TAF5L (ENSG00000135801) URB2 (ENSG00000135763) GALNT2 (ENSG00000143641) Gorilla MODERN SPECIES ENSGGOG00000037683 SNAP47 (ENSGGOG00000008442) #12 PRSS38 (ENSGGOG00000012849) #13 WNT9A (ENSGGOG00000004569) #14 ENSGGOG00000037788 WNT3A (ENSGGOG00000006562) #15 ENSGGOG00000023449 ARF1 (ENSGGOG00000011263) #16 C1orf35 (ENSGGOG00000015702) #17 ENSGGOG00000015709 #18 ENSGGOG00000039931 ENSGGOG00000013567 #19 ENSGGOG00000027354 #20 IBA57 (ENSGGOG00000013646) #21 ENSGGOG00000012820 ENSGGOG00000012717 #22 TRIM11 (ENSGGOG00000016890) #23 TRIM17 (ENSGGOG00000016899) #24 ENSGGOG00000027960 H2AC25 (ENSGGOG00000037094) #25 H2BC26 (ENSGGOG00000039267) #26 ENSGGOG00000037971 ##26 ENSGGOG00000026023 #27 ENSGGOG00000011409 ENSGGOG00000007918 ENSGGOG00000040773 RAB4A (ENSGGOG00000015714) CCSAP (ENSGGOG00000014931) ACTA1 (ENSGGOG00000011599) NUP133 (ENSGGOG00000000930) ABCB10 (ENSGGOG00000008699) Platyrrhini ANCESTRAL SPECIES 55 ENSGT00940000162415 ENSGT00940000161967 ENSGT00910000148176 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.bb.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Cebidae ANCESTRAL SPECIES 23 ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.bb.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263504.a.b.b.b.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00390000018900 ENSGT00390000004799 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b ENSGT00940000156766 ENSGT00940000156992 ENSGT00940000160590 Marmoset MODERN SPECIES 10 ENSCJAG00000066453 ENSCJAG00000082577 ZNF124 (ENSCJAG00000011765) ZNF670 (ENSCJAG00000011738) ZNF669 (ENSCJAG00000048657) JMJD4 (ENSCJAG00000011727) #11 SNAP47 (ENSCJAG00000039821) #12 WNT9A (ENSCJAG00000080517) #14 WNT3A (ENSCJAG00000016650) #15 ARF1 (ENSCJAG00000041786) #16 C1orf35 (ENSCJAG00000016721) #17 MRPL55 (ENSCJAG00000016730) #18 ENSCJAG00000016738 #19 GJC2 (ENSCJAG00000016746) #20 IBA57 (ENSCJAG00000016749) #21 OBSCN (ENSCJAG00000054288) #22 TRIM11 (ENSCJAG00000016757) #23 TRIM17 (ENSCJAG00000016765) #24 H2AC25 (ENSCJAG00000083637) #25 H2BC26 (ENSCJAG00000077602) #26 ENSCJAG00000071519 ##26 RNF187 (ENSCJAG00000016779) #27 ENSCJAG00000059253 #28 ENSCJAG00000082135 AHCTF1 (ENSCJAG00000016790) SCCPDH (ENSCJAG00000016806) CNST (ENSCJAG00000016834) TFB2M (ENSCJAG00000016845) ENSCJAG00000055715 SMYD3 (ENSCJAG00000016856) ENSCJAG00000079381 Cebidae_a ANCESTRAL SPECIES 11 ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.bb.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00390000016274 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263504.a.b.b.b.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00390000018900 ENSGT00390000004799 ENSGT00390000005861 ENSGT00950000183142.a.b.a.b ENSGT00940000156766 ENSGT00940000156992 ENSGT00940000160590 Capuchin MODERN SPECIES 75 ZNF670 (ENSCCAG00000027449) ENSCCAG00000031402 ENSCCAG00000021671 JMJD4 (ENSCCAG00000035807) #11 SNAP47 (ENSCCAG00000027134) #12 PRSS38 (ENSCCAG00000020907) #13 WNT9A (ENSCCAG00000030978) #14 WNT3A (ENSCCAG00000009359) #15 ENSCCAG00000023374 #16 C1orf35 (ENSCCAG00000020266) #17 MRPL55 (ENSCCAG00000031724) #18 GUK1 (ENSCCAG00000035707) #19 GJC2 (ENSCCAG00000020287) #20 IBA57 (ENSCCAG00000019844) #21 ENSCCAG00000023630 OBSCN (ENSCCAG00000032571) #22 ENSCCAG00000016195 TRIM11 (ENSCCAG00000036943) #23 TRIM17 (ENSCCAG00000025121) #24 ENSCCAG00000036407 H2AW (ENSCCAG00000012315) #25 H2BU1 (ENSCCAG00000015023) #26 ENSCCAG00000012567 ##26 RNF187 (ENSCCAG00000028705) #27 ENSCCAG00000025344 #28 ENSCCAG00000018435 AHCTF1 (ENSCCAG00000023436) SCCPDH (ENSCCAG00000022176) ENSCCAG00000020404 CNST (ENSCCAG00000038009) TFB2M (ENSCCAG00000028811) Bolivian squirrel monkey MODERN SPECIES 114 OR2C3 (ENSSBOG00000028292) OR2B11 (ENSSBOG00000031196) NLRP3 (ENSSBOG00000030084) ZNF496 (ENSSBOG00000005783) ENSSBOG00000021324 JMJD4 (ENSSBOG00000026344) #11 ENSSBOG00000025438 #12 PRSS38 (ENSSBOG00000025229) #13 WNT9A (ENSSBOG00000025218) #14 WNT3A (ENSSBOG00000020846) #15 ENSSBOG00000030557 #16 C1orf35 (ENSSBOG00000023673) #17 MRPL55 (ENSSBOG00000035388) #18 GUK1 (ENSSBOG00000026897) #19 IBA57 (ENSSBOG00000022497) #21 OBSCN (ENSSBOG00000032380) #22 TRIM11 (ENSSBOG00000005125) #23 TRIM17 (ENSSBOG00000030344) #24 H2AC25 (ENSSBOG00000019953) #25 H2BC26 (ENSSBOG00000008375) #26 ENSSBOG00000019925 ##26 AHCTF1 (ENSSBOG00000004404) SCCPDH (ENSSBOG00000021995) CNST (ENSSBOG00000028424) TFB2M (ENSSBOG00000033950) ENSSBOG00000035160 SMYD3 (ENSSBOG00000026164) KIF26B (ENSSBOG00000034697) EFCAB2 (ENSSBOG00000034755) HNRNPU (ENSSBOG00000026500) COX20 (ENSSBOG00000029804) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1116 ZNF496 (ENSANAG00000022228) ZNF124 (ENSANAG00000029658) ZNF670 (ENSANAG00000033492) ZNF669 (ENSANAG00000013317) ENSANAG00000022916 JMJD4 (ENSANAG00000028105) #11 SNAP47 (ENSANAG00000035151) #12 WNT9A (ENSANAG00000032624) #14 WNT3A (ENSANAG00000021377) #15 ENSANAG00000036021 #16 C1orf35 (ENSANAG00000020714) #17 MRPL55 (ENSANAG00000036592) #18 GUK1 (ENSANAG00000027172) #19 IBA57 (ENSANAG00000022164) #21 ENSANAG00000029250 OBSCN (ENSANAG00000024031) #22 TRIM11 (ENSANAG00000034240) #23 ENSANAG00000028749 #24 ENSANAG00000022375 H2AC25 (ENSANAG00000031714) #25 H2BC26 (ENSANAG00000010772) #26 ENSANAG00000031738 ##26 ENSANAG00000026087 Mas night monkey MODERN SPECIES 119 ENSANAG00000024508 #22 Euarchontoglires_A ANCESTRAL SPECIES 28 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Glires ANCESTRAL SPECIES 29 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Lagomorpha ANCESTRAL SPECIES 245 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b Pika MODERN SPECIES 1849 ENSOPRG00000006266 #19 GJC2 (ENSOPRG00000006277) #20 IBA57 (ENSOPRG00000006282) #21 ENSOPRG00000006299 #22 ENSOPRG00000006380 TRIM11 (ENSOPRG00000006293) #23 Rabbit MODERN SPECIES 793 ENSOCUG00000011505 #22 TRIM11 (ENSOCUG00000038242) #23 TRIM17 (ENSOCUG00000014636) #24 H2BC26 (ENSOCUG00000033562) ##26 ENSOCUG00000022340 #28 Rodentia ANCESTRAL SPECIES 7 ENSGT01090000260044.A.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Rodentia_A ANCESTRAL SPECIES 31 ENSGT01090000260044.A.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Hystricomorpha ANCESTRAL SPECIES 63 ENSGT01090000260044.A.b.a.a.a.a.a.c ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Naked mole-rat female MODERN SPECIES ENSHGLG00000000671 ENSHGLG00000043542 ENSHGLG00000001102 ENSHGLG00000047340 JMJD4 (ENSHGLG00000001365) #11 ENSHGLG00000001357 #12 PRSS38 (ENSHGLG00000043627) #13 WNT9A (ENSHGLG00000038418) #14 WNT3A (ENSHGLG00000001502) #15 ARF1 (ENSHGLG00000038119) #16 ENSHGLG00000001640 #17 MRPL55 (ENSHGLG00000048301) #18 GUK1 (ENSHGLG00000000309) #19 GJC2 (ENSHGLG00000033969) #20 IBA57 (ENSHGLG00000002132) #21 OBSCN (ENSHGLG00000047806) #22 TRIM11 (ENSHGLG00000002253) #23 TRIM17 (ENSHGLG00000006970) #24 H3-4 (ENSHGLG00000020558) H2AC25 (ENSHGLG00000037975) #25 H2BC26 (ENSHGLG00000044541) #26 ENSHGLG00000035981 ##26 ENSHGLG00000000597 #27 ENSHGLG00000038457 #28 ENSHGLG00000049243 ENSHGLG00000033964 ENSHGLG00000032928 ENSHGLG00000046686 ENSHGLG00000047273 ENSHGLG00000019679 ENSHGLG00000019790 Hystricomorpha_a ANCESTRAL SPECIES 79 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Hystricomorpha_b ANCESTRAL SPECIES 106 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00940000160177 Long-tailed chinchilla MODERN SPECIES 288 OR9H1P (ENSCLAG00000017416) OR2G3 (ENSCLAG00000017414) ENSCLAG00000000375 OR2B11 (ENSCLAG00000017578) NLRP3 (ENSCLAG00000000708) ZNF496 (ENSCLAG00000000579) JMJD4 (ENSCLAG00000000501) #11 SNAP47 (ENSCLAG00000000744) #12 WNT9A (ENSCLAG00000000535) #14 WNT3A (ENSCLAG00000000529) #15 ARF1 (ENSCLAG00000000520) #16 C1orf35 (ENSCLAG00000001077) #17 MRPL55 (ENSCLAG00000000917) #18 GUK1 (ENSCLAG00000000853) #19 IBA57 (ENSCLAG00000000741) #21 ENSCLAG00000000505 #22 TRIM11 (ENSCLAG00000000197) #23 TRIM17 (ENSCLAG00000000538) #24 H2BC26 (ENSCLAG00000017444) #26 ENSCLAG00000017452 ##26 RNF187 (ENSCLAG00000001629) #27 ENSCLAG00000001526 ENSCLAG00000001377 Sciuridae ANCESTRAL SPECIES 55 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Eurasian red squirrel MODERN SPECIES 15 OR2C3 (ENSSVLG00005004659) NLRP3 (ENSSVLG00005004506) JMJD4 (ENSSVLG00005004411) #11 SNAP47 (ENSSVLG00005004391) #12 PRSS38 (ENSSVLG00005004365) #13 WNT9A (ENSSVLG00005004346) #14 WNT3A (ENSSVLG00005004327) #15 ENSSVLG00005004310 #16 C1orf35 (ENSSVLG00005004286) #17 MRPL55 (ENSSVLG00005004258) #18 ENSSVLG00005004242 GUK1 (ENSSVLG00005004220) #19 ENSSVLG00005004192 GJC2 (ENSSVLG00005004174) #20 IBA57 (ENSSVLG00005004163) #21 OBSCN (ENSSVLG00005004022) #22 TRIM11 (ENSSVLG00005003920) #23 TRIM17 (ENSSVLG00005003894) #24 H3-4 (ENSSVLG00005003884) H2AC25 (ENSSVLG00005003875) #25 H2BC26 (ENSSVLG00005003865) #26 ENSSVLG00005003856 ##26 RNF187 (ENSSVLG00005003848) #27 ENSSVLG00005003828 #28 ENSSVLG00005003818 ZNF496 (ENSSVLG00005003801) Marmotini ANCESTRAL SPECIES 100 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 Alpin marmot MODERN SPECIES 56 OR2B11 (ENSMMMG00000017357) NLRP3 (ENSMMMG00000017362) ZNF496 (ENSMMMG00000017364) ENSMMMG00000017372 ENSMMMG00000017378 JMJD4 (ENSMMMG00000017399) #11 SNAP47 (ENSMMMG00000017415) #12 PRSS38 (ENSMMMG00000017421) #13 WNT9A (ENSMMMG00000017429) #14 WNT3A (ENSMMMG00000017437) #15 ENSMMMG00000017464 #16 MRPL55 (ENSMMMG00000017475) #18 GUK1 (ENSMMMG00000017488) #19 GJC2 (ENSMMMG00000017501) #20 IBA57 (ENSMMMG00000017504) #21 OBSCN (ENSMMMG00000017510) #22 TRIM11 (ENSMMMG00000017547) #23 TRIM17 (ENSMMMG00000017550) #24 H3-4 (ENSMMMG00000017555) H2AC25 (ENSMMMG00000017567) #25 H2BC26 (ENSMMMG00000017570) #26 ENSMMMG00000017596 ##26 RNF187 (ENSMMMG00000017598) #27 ENSMMMG00000017603 #28 ENSMMMG00000017616 Rodentia_B ANCESTRAL SPECIES 46 ENSGT01090000260044.A.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00940000162246 ENSGT01090000260018.A.a.a.b.b ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000259995.a.a.a ENSGT00390000010671 #37 ENSGT00730000111648 #36 Kangaroo rat MODERN SPECIES 346 ENSDORG00000027626 Nlrp3 (ENSDORG00000010673) Zkscan17 (ENSDORG00000028040) Wnt9a (ENSDORG00000005390) #14 ENSDORG00000027855 #16 Guk1 (ENSDORG00000007614) #19 Obscn (ENSDORG00000016208) #22 Trim11 (ENSDORG00000029829) #23 H2ac25 (ENSDORG00000026130) #25 H2bc26-ps (ENSDORG00000024270) #26 ENSDORG00000005512 Sh3bp5l (ENSDORG00000007183) #34 Fasl (ENSDORG00000011897) Suco (ENSDORG00000011895) Pigc (ENSDORG00000030248) Dnm3 (ENSDORG00000002505) Mettl13 (ENSDORG00000011976) Prrc2c (ENSDORG00000001422) Fmo1 (ENSDORG00000029306) Fmo2 (ENSDORG00000004731) Fmo3 (ENSDORG00000006804) ENSDORG00000003154 Myomorpha ANCESTRAL SPECIES 28 ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000182755.b.a.a.a.a.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00390000006224 ENSGT01090000260018.C.b.a.a ENSGT01090000260018.C.a ENSGT01090000259995.b.b.a.b ENSGT01100000263486.a.b.a.b.b.a.a ENSGT00940000162246 Lesser Egyptian jerboa MODERN SPECIES 63 Or2b11 (ENSJJAG00000004515) Nlrp3 (ENSJJAG00000007323) Zkscan17 (ENSJJAG00000022828) Zfp867 (ENSJJAG00000008459) Jmjd4 (ENSJJAG00000012776) #11 Snap47 (ENSJJAG00000023009) #12 Prss38 (ENSJJAG00000022512) #13 Wnt9a (ENSJJAG00000020971) #14 Wnt3a (ENSJJAG00000020598) #15 ENSJJAG00000020245 #16 2310033P09Rik (ENSJJAG00000001888) #17 Mrpl55 (ENSJJAG00000021164) #18 Guk1 (ENSJJAG00000021658) #19 Gjc2 (ENSJJAG00000011405) #20 Iba57 (ENSJJAG00000023432) #21 Obscn (ENSJJAG00000023196) #22 Trim11 (ENSJJAG00000019654) #23 Trim17 (ENSJJAG00000017850) #24 ENSJJAG00000017460 H2ac25 (ENSJJAG00000004184) #25 H2bc26-ps (ENSJJAG00000003959) #26 ENSJJAG00000011864 #27 Btnl10 (ENSJJAG00000023413) #28 Zfp39 (ENSJJAG00000018925) ENSJJAG00000000550 Fam183b (ENSJJAG00000018849) Or2t44 (ENSJJAG00000018515) ENSJJAG00000003913 Trim58 (ENSJJAG00000016816) Or11l3 (ENSJJAG00000002201) ENSJJAG00000012885 Muroidea ANCESTRAL SPECIES 10 ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000182755.b.a.a.a.a.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00390000006224 ENSGT01090000260018.C.b.a.a ENSGT01090000260018.C.a ENSGT01090000259995.b.b.a.b ENSGT01100000263486.a.b.a.b.b.a.a ENSGT00940000162246 Upper Galilee mountains blind mole rat MODERN SPECIES 540 Guk1 (ENSNGAG00000022722) #19 Gjc2 (ENSNGAG00000022035) #20 Iba57 (ENSNGAG00000021761) #21 Obscn (ENSNGAG00000023799) #22 Trim11 (ENSNGAG00000023375) #23 Trim17 (ENSNGAG00000023965) #24 ENSNGAG00000011099 H2ac25 (ENSNGAG00000012071) #25 H2bc26-ps (ENSNGAG00000012301) #26 H2bc27 (ENSNGAG00000010344) ##26 ENSNGAG00000019603 #27 Btnl10 (ENSNGAG00000011467) #28 Zfp39 (ENSNGAG00000019853) ENSNGAG00000012548 2810021J22Rik (ENSNGAG00000011744) ENSNGAG00000024130 Fam183b (ENSNGAG00000019487) ENSNGAG00000003871 ENSNGAG00000011228 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000162415 ENSGT00900000143207 ENSGT00940000161967 ENSGT00950000182755.b.a.a.a.a.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00940000159981.e.a ENSGT00940000159981.e.b ENSGT01060000248581.C.a.b.a.a ENSGT00390000006224 ENSGT01090000260018.C.b.a.a ENSGT01090000260018.C.a Murinae ANCESTRAL SPECIES 7 ENSGT00940000162415 ENSGT00900000143207 ENSGT00940000161967 ENSGT00950000182755.b.a.a.a.a.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00950000183522 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00940000159981.e.a ENSGT00940000159981.e.b ENSGT01060000248581.C.a.b.a.a ENSGT00390000006224 ENSGT01090000260018.C.b.a.a ENSGT01090000260018.C.a Mus ANCESTRAL SPECIES 2 ENSGT00940000162415 ENSGT00900000143207 ENSGT00940000161967 ENSGT00950000182755.b.a.a.a.a.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00950000183522 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00940000159981.e.a ENSGT00940000159981.e.b ENSGT00390000006224 ENSGT01090000260018.C.b.a.a ENSGT01090000260018.C.a ENSGT01090000259995.b.b.a.b.i Mus_A ANCESTRAL SPECIES 2 ENSGT00940000162415 ENSGT00900000143207 ENSGT00940000161967 ENSGT00950000182755.b.a.a.a.a.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.g.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00950000183522 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00940000159981.e.a ENSGT00940000159981.e.b ENSGT00390000006224 ENSGT01090000260018.C.b.a.a ENSGT01090000260018.C.a ENSGT01090000259995.b.b.a.b.i.c.b Ryukyu mouse MODERN SPECIES 2 Nlrp3 (MGP_CAROLIEiJ_G0016439) Zkscan17 (MGP_CAROLIEiJ_G0016438) Zfp867 (MGP_CAROLIEiJ_G0016437) Jmjd4 (MGP_CAROLIEiJ_G0016436) #11 MGP_CAROLIEiJ_G0016435 #12 Prss38 (MGP_CAROLIEiJ_G0016434) #13 Wnt9a (MGP_CAROLIEiJ_G0016433) #14 Wnt3a (MGP_CAROLIEiJ_G0016432) #15 MGP_CAROLIEiJ_G0016431 #16 MGP_CAROLIEiJ_G0016430 #16 2310033P09Rik (MGP_CAROLIEiJ_G0016429) #17 Mrpl55 (MGP_CAROLIEiJ_G0016428) #18 Guk1 (MGP_CAROLIEiJ_G0016427) #19 Gjc2 (MGP_CAROLIEiJ_G0016426) #20 Iba57 (MGP_CAROLIEiJ_G0016425) #21 MGP_CAROLIEiJ_G0016424 #22 Trim11 (MGP_CAROLIEiJ_G0016423) #23 Trim17 (MGP_CAROLIEiJ_G0016421) #24 H2ac25 (MGP_CAROLIEiJ_G0016422) #25 H2bc27 (MGP_CAROLIEiJ_G0016420) ##26 MGP_CAROLIEiJ_G0016419 Btnl10 (MGP_CAROLIEiJ_G0016418) #28 Zfp39 (MGP_CAROLIEiJ_G0016417) 2810021J22Rik (MGP_CAROLIEiJ_G0016416) Gm12258 (MGP_CAROLIEiJ_G0016415) Fam183b (MGP_CAROLIEiJ_G0016414) Or2t44 (MGP_CAROLIEiJ_G0016413) Or2t45 (MGP_CAROLIEiJ_G0016412) MGP_CAROLIEiJ_G0016411 MGP_CAROLIEiJ_G0016410 MGP_CAROLIEiJ_G0016409 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000162415 ENSGT00900000143207 ENSGT00940000161967 ENSGT00950000182755.b.a.a.a.a.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.g.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00950000183522 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00940000159981.e.a ENSGT00940000159981.e.b ENSGT01060000248581.C.a.b.a.a.l ENSGT00390000006224 ENSGT01090000260018.C.b.a.a ENSGT01090000260018.C.a Mouse MODERN SPECIES 2 Or2b11 (ENSMUSG00000059610) Nlrp3 (ENSMUSG00000032691) Zkscan17 (ENSMUSG00000020472) Zfp867 (ENSMUSG00000054519) Jmjd4 (ENSMUSG00000036819) #11 Snap47 (ENSMUSG00000009894) #12 Prss38 (ENSMUSG00000049291) #13 Wnt9a (ENSMUSG00000000126) #14 Wnt3a (ENSMUSG00000009900) #15 Arf1 (ENSMUSG00000048076) #16 2310033P09Rik (ENSMUSG00000020441) #17 Mrpl55 (ENSMUSG00000036860) #18 Guk1 (ENSMUSG00000020444) #19 Gjc2 (ENSMUSG00000043448) #20 Iba57 (ENSMUSG00000049287) #21 Obscn (ENSMUSG00000061462) #22 Trim11 (ENSMUSG00000020455) #23 H3f4 (ENSMUSG00000080152) Trim17 (ENSMUSG00000036964) #24 H2ac25 (ENSMUSG00000078851) #25 H2bc26-ps (ENSMUSG00000080712) #26 H2bc27 (ENSMUSG00000056895) ##26 Rnf187 (ENSMUSG00000020496) Btnl10 (ENSMUSG00000020490) #28 Zfp39 (ENSMUSG00000037001) 2810021J22Rik (ENSMUSG00000020491) Gm12258 (ENSMUSG00000072915) Or9e1 (ENSMUSG00000094805) Or5af1 (ENSMUSG00000096806) Or5af2 (ENSMUSG00000070438) Fam183b (ENSMUSG00000049154) Mus_C ANCESTRAL SPECIES 3 ENSGT00940000162415 ENSGT00900000143207 ENSGT00940000161967 ENSGT00950000182755.b.a.a.a.a.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.g.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00950000183522 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00940000159981.e.a ENSGT00940000159981.e.b ENSGT01060000248581.C.a.b.a.a.l ENSGT00390000006224 ENSGT01090000260018.C.b.a.a ENSGT01090000260018.C.a Steppe mouse MODERN SPECIES 3105 Zkscan17 (ENSMSIG00000020997) ENSMSIG00000021018 Zfp867 (ENSMSIG00000021023) Jmjd4 (ENSMSIG00000021041) #11 Snap47 (ENSMSIG00000021067) #12 Prss38 (ENSMSIG00000021101) #13 Wnt9a (ENSMSIG00000021113) #14 Wnt3a (ENSMSIG00000021119) #15 ENSMSIG00000021128 #16 2310033P09Rik (ENSMSIG00000021149) #17 Mrpl55 (ENSMSIG00000021173) #18 Guk1 (ENSMSIG00000021189) #19 Gjc2 (ENSMSIG00000021219) #20 Iba57 (ENSMSIG00000021231) #21 ENSMSIG00000021247 Obscn (ENSMSIG00000021262) #22 ENSMSIG00000021680 Trim11 (ENSMSIG00000021692) #23 Trim17 (ENSMSIG00000021747) #24 H3f4 (ENSMSIG00000021760) H2ac25 (ENSMSIG00000021773) #25 H2bc26-ps (ENSMSIG00000021777) #26 H2bc27 (ENSMSIG00000021813) ##26 ENSMSIG00000021818 Btnl10 (ENSMSIG00000021827) #28 Zfp39 (ENSMSIG00000021841) 2810021J22Rik (ENSMSIG00000021856) Gm12258 (ENSMSIG00000021863) Or5af2 (ENSMSIG00000021882) ENSMSIG00000021888 Or2t44 (ENSMSIG00000021908) spretus MODERN SPECIES 2 MGP_SPRETEiJ_G0017276 Or2b11 (MGP_SPRETEiJ_G0017275) Nlrp3 (MGP_SPRETEiJ_G0017274) Zkscan17 (MGP_SPRETEiJ_G0017273) Zfp867 (MGP_SPRETEiJ_G0017272) Jmjd4 (MGP_SPRETEiJ_G0017271) #11 Snap47 (MGP_SPRETEiJ_G0017270) #12 Prss38 (MGP_SPRETEiJ_G0017269) #13 Wnt9a (MGP_SPRETEiJ_G0017268) #14 Wnt3a (MGP_SPRETEiJ_G0017267) #15 2310033P09Rik (MGP_SPRETEiJ_G0017266) #17 Mrpl55 (MGP_SPRETEiJ_G0017265) #18 Guk1 (MGP_SPRETEiJ_G0017264) #19 Gjc2 (MGP_SPRETEiJ_G0017263) #20 Iba57 (MGP_SPRETEiJ_G0017262) #21 Obscn (MGP_SPRETEiJ_G0017261) #22 Trim11 (MGP_SPRETEiJ_G0017260) #23 Trim17 (MGP_SPRETEiJ_G0017259) #24 H2ac25 (MGP_SPRETEiJ_G0017258) #25 H2bc27 (MGP_SPRETEiJ_G0017257) ##26 MGP_SPRETEiJ_G0017256 Btnl10 (MGP_SPRETEiJ_G0017255) #28 Zfp39 (MGP_SPRETEiJ_G0017254) 2810021J22Rik (MGP_SPRETEiJ_G0017253) Gm12258 (MGP_SPRETEiJ_G0017252) Fam183b (MGP_SPRETEiJ_G0017251) Or2t44 (MGP_SPRETEiJ_G0017250) Or2t45 (MGP_SPRETEiJ_G0017249) MGP_SPRETEiJ_G0017248 MGP_SPRETEiJ_G0017247 Or11l3 (MGP_SPRETEiJ_G0017246) Shrew mouse MODERN SPECIES 5 Or2b11 (MGP_PahariEiJ_G0017570) MGP_PahariEiJ_G0017569 Zkscan17 (MGP_PahariEiJ_G0017568) Zfp867 (MGP_PahariEiJ_G0017567) Jmjd4 (MGP_PahariEiJ_G0017566) #11 MGP_PahariEiJ_G0017565 #12 Prss38 (MGP_PahariEiJ_G0017564) #13 Wnt9a (MGP_PahariEiJ_G0017563) #14 Wnt3a (MGP_PahariEiJ_G0017562) #15 Arf1 (MGP_PahariEiJ_G0017561) #16 2310033P09Rik (MGP_PahariEiJ_G0017560) #17 Mrpl55 (MGP_PahariEiJ_G0017559) #18 Guk1 (MGP_PahariEiJ_G0017558) #19 Gjc2 (MGP_PahariEiJ_G0017557) #20 Iba57 (MGP_PahariEiJ_G0017556) #21 Obscn (MGP_PahariEiJ_G0017555) #22 Trim11 (MGP_PahariEiJ_G0017554) #23 Trim17 (MGP_PahariEiJ_G0017553) #24 H2ac25 (MGP_PahariEiJ_G0017552) #25 H2bc27 (MGP_PahariEiJ_G0017551) ##26 MGP_PahariEiJ_G0017550 Btnl10 (MGP_PahariEiJ_G0017549) #28 Zfp39 (MGP_PahariEiJ_G0017548) 2810021J22Rik (MGP_PahariEiJ_G0017547) Gm12258 (MGP_PahariEiJ_G0017546) Fam183b (MGP_PahariEiJ_G0017545) Or2t44 (MGP_PahariEiJ_G0017544) Or2t45 (MGP_PahariEiJ_G0017543) Trim58 (MGP_PahariEiJ_G0017542) Or11l3 (MGP_PahariEiJ_G0017541) MGP_PahariEiJ_G0017540 #36 Rat MODERN SPECIES 1 Nlrp3 (ENSRNOG00000003170) Zfp496 (ENSRNOG00000003129) Ftl1 (ENSRNOG00000020843) Zfp867 (ENSRNOG00000022431) Jmjd4 (ENSRNOG00000022438) #11 Snap47 (ENSRNOG00000022472) #12 Prss38 (ENSRNOG00000022548) #13 Wnt9a (ENSRNOG00000003066) #14 Wnt3a (ENSRNOG00000003039) #15 Arf1 (ENSRNOG00000060229) #16 C10h1orf35 (ENSRNOG00000002944) #17 Mrpl55 (ENSRNOG00000002943) #18 Guk1 (ENSRNOG00000002928) #19 Gjc2 (ENSRNOG00000038328) #20 Iba57 (ENSRNOG00000068756) #21 Obscn (ENSRNOG00000058068) #22 Trim11 (ENSRNOG00000002915) #23 H2ac25 (ENSRNOG00000022983) #24 H2ac25 (ENSRNOG00000064520) #25 H2bu1 (ENSRNOG00000066919) #26 Hist3h2ba (ENSRNOG00000043419) ##26 Rnf187 (ENSRNOG00000049219) Btnl10 (ENSRNOG00000043019) #28 Zfp39 (ENSRNOG00000014712) LOC102555635 (ENSRNOG00000023431) RGD1561277 (ENSRNOG00000051868) Or9e1b (ENSRNOG00000062948) Or5af1c (ENSRNOG00000069086) Or5af1 (ENSRNOG00000069128) Or5af1b (ENSRNOG00000065010) Cfap144 (ENSRNOG00000002873) Cricetidae ANCESTRAL SPECIES ENSGT00940000162415 ENSGT00900000143207 ENSGT00940000161967 ENSGT00950000182755.b.a.a.a.a.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00940000159981.e.a ENSGT00940000159981.e.b ENSGT01060000248581.C.a.b.a.a ENSGT00390000006224 ENSGT01090000260018.C.b.a.a ENSGT01090000260018.C.a Cricetinae ANCESTRAL SPECIES ENSGT00940000162415 ENSGT00900000143207 ENSGT00940000161967 ENSGT00950000182755.b.a.a.a.a.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00940000159981.e.a ENSGT00940000159981.e.b ENSGT01060000248581.C.a.b.a.a ENSGT00390000006224 ENSGT01090000260018.C.b.a.a ENSGT01090000260018.C.a Golden Hamster MODERN SPECIES 627 Nlrp3 (ENSMAUG00000020051) ENSMAUG00000006329 ENSMAUG00000017910 Zkscan17 (ENSMAUG00000016630) ENSMAUG00000019046 Jmjd4 (ENSMAUG00000017265) #11 Snap47 (ENSMAUG00000020014) #12 Prss38 (ENSMAUG00000019978) #13 Wnt9a (ENSMAUG00000021643) #14 Wnt3a (ENSMAUG00000021475) #15 ENSMAUG00000022253 #16 2310033P09Rik (ENSMAUG00000019958) #17 Guk1 (ENSMAUG00000022283) #19 Gjc2 (ENSMAUG00000020150) #20 Iba57 (ENSMAUG00000020575) #21 Obscn (ENSMAUG00000022279) #22 Trim11 (ENSMAUG00000001510) #23 Trim17 (ENSMAUG00000004817) #24 H3f4 (ENSMAUG00000010700) ENSMAUG00000010470 H2ac25 (ENSMAUG00000010628) #25 H2bc26-ps (ENSMAUG00000010794) #26 H2bc27 (ENSMAUG00000010540) ##26 ENSMAUG00000021471 #27 ENSMAUG00000020727 Btnl10 (ENSMAUG00000021399) #28 Zfp39 (ENSMAUG00000001536) ENSMAUG00000002461 ENSMAUG00000002837 Fam183b (ENSMAUG00000021857) ENSMAUG00000010641 Chinese hamster chok1gshd MODERN SPECIES 229 Nlrp3 (ENSCGRG00001021138) ENSCGRG00001021260 Zkscan17 (ENSCGRG00001020767) Zfp867 (ENSCGRG00001016010) Jmjd4 (ENSCGRG00001013252) #11 Snap47 (ENSCGRG00001004500) #12 Prss38 (ENSCGRG00001019522) #13 Wnt9a (ENSCGRG00001016816) #14 Wnt3a (ENSCGRG00001015217) #15 Arf1 (ENSCGRG00001013922) #16 2310033P09Rik (ENSCGRG00001021154) #17 Mrpl55 (ENSCGRG00001020506) #18 ENSCGRG00001016847 #19 Gjc2 (ENSCGRG00001008796) #20 Iba57 (ENSCGRG00001007484) #21 Obscn (ENSCGRG00001023809) #22 Trim11 (ENSCGRG00001016227) #23 Trim17 (ENSCGRG00001017038) #24 ENSCGRG00001009610 H2bc27 (ENSCGRG00001005703) ##26 H2bc26-ps (ENSCGRG00001013795) #26 H2ac25 (ENSCGRG00001008750) #25 ENSCGRG00001017170 #27 ENSCGRG00001015992 Zfp39 (ENSCGRG00001002406) 2810021J22Rik (ENSCGRG00001001041) ENSCGRG00001012941 ENSCGRG00001007292 ENSCGRG00001008023 Fam183b (ENSCGRG00001024113) Or2t44 (ENSCGRG00001022873) Cricetidae_B ANCESTRAL SPECIES ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 ENSGT00940000161967 ENSGT00950000182755.b.a.a.a.a.b ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b ENSGT00940000153092.a.a.c.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #26 ENSGT01100000263474.a.b.b.e.b.a.b ##26 ENSGT00390000009510 #27 ENSGT00940000163997 #28 ENSGT00940000160177 ENSGT00940000159981.e.a ENSGT00940000159981.e.b ENSGT01060000248581.C.a.b.a.a ENSGT00390000006224 ENSGT01090000260018.C.b.a.a ENSGT01090000260018.C.a Northern American deer mouse MODERN SPECIES 21 Nlrp3 (ENSPEMG00000018349) Zkscan17 (ENSPEMG00000028678) Zfp867 (ENSPEMG00000015201) Jmjd4 (ENSPEMG00000025158) #11 Snap47 (ENSPEMG00000003186) #12 Prss38 (ENSPEMG00000000315) #13 ENSPEMG00000026476 Wnt9a (ENSPEMG00000008917) #14 Wnt3a (ENSPEMG00000014970) #15 Arf1 (ENSPEMG00000024884) #16 2310033P09Rik (ENSPEMG00000016726) #17 Mrpl55 (ENSPEMG00000010381) #18 Guk1 (ENSPEMG00000007733) #19 Gjc2 (ENSPEMG00000015748) #20 Iba57 (ENSPEMG00000029448) #21 Obscn (ENSPEMG00000017360) #22 Trim11 (ENSPEMG00000013300) #23 Trim17 (ENSPEMG00000012957) #24 H3f4 (ENSPEMG00000028465) H2ac25 (ENSPEMG00000025825) #25 H2bc26-ps (ENSPEMG00000029564) #26 H2bc27 (ENSPEMG00000029370) ##26 ENSPEMG00000024885 #27 Btnl10 (ENSPEMG00000010544) #28 Zfp39 (ENSPEMG00000009428) 2810021J22Rik (ENSPEMG00000028205) Gm12258 (ENSPEMG00000029020) ENSPEMG00000027643 ENSPEMG00000025827 Fam183b (ENSPEMG00000020878) Or2t44 (ENSPEMG00000022635) Prairie vole MODERN SPECIES 15 ENSMOCG00000004021 ENSMOCG00000007500 Zkscan17 (ENSMOCG00000021773) Zfp867 (ENSMOCG00000017475) Jmjd4 (ENSMOCG00000019517) #11 Snap47 (ENSMOCG00000021698) #12 Prss38 (ENSMOCG00000020492) #13 Wnt9a (ENSMOCG00000022972) #14 Wnt3a (ENSMOCG00000022805) #15 Arf1 (ENSMOCG00000005344) #16 2310033P09Rik (ENSMOCG00000020633) #17 Mrpl55 (ENSMOCG00000022355) #18 Guk1 (ENSMOCG00000020868) #19 Gjc2 (ENSMOCG00000015445) #20 Iba57 (ENSMOCG00000019048) #21 Obscn (ENSMOCG00000009245) #22 Trim11 (ENSMOCG00000021941) #23 Trim17 (ENSMOCG00000016644) #24 H3f4 (ENSMOCG00000002973) H2ac25 (ENSMOCG00000002942) #25 H2bc26-ps (ENSMOCG00000003080) #26 H2bc27 (ENSMOCG00000002061) ##26 Rnf187 (ENSMOCG00000021645) Btnl10 (ENSMOCG00000005486) #28 Zfp39 (ENSMOCG00000017961) ENSMOCG00000003250 ENSMOCG00000006893 Fam183b (ENSMOCG00000013813) ENSMOCG00000011805 ENSMOCG00000002169 Trim58 (ENSMOCG00000019086) Tree shrew DUPLICATION Tree shrew DUPLICATION Tree shrew MODERN SPECIES 3043 ENSTBEG00000011028 #22 ENSTBEG00000011545 ENSTBEG00000011639 #22 Tree shrew MODERN SPECIES 3043 ENSTBEG00000011028 #22 ENSTBEG00000011545 ENSTBEG00000011639 #22 Tree shrew MODERN SPECIES 9772 ENSTBEG00000003110 #22 Atlantogenata ANCESTRAL SPECIES 148 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000155138.f ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00390000016274 Afrotheria ANCESTRAL SPECIES 186 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000155138.f ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00390000016274 Tenrec MODERN SPECIES 4743 ENSETEG00000006375 #22 Afrotheria_a ANCESTRAL SPECIES 187 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000155138.f ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00390000016274 Elephant MODERN SPECIES 27 H3-4 (ENSLAFG00000031137) TRIM11 (ENSLAFG00000017039) #23 ENSLAFG00000032186 #24 JMJD4 (ENSLAFG00000022162) #11 SNAP47 (ENSLAFG00000028954) #12 PRSS38 (ENSLAFG00000005934) #13 ENSLAFG00000031393 WNT9A (ENSLAFG00000017352) #14 ENSLAFG00000031881 #15 ARF1 (ENSLAFG00000006987) #16 C1orf35 (ENSLAFG00000003007) #17 MRPL55 (ENSLAFG00000003008) #18 GUK1 (ENSLAFG00000026666) #19 GJC2 (ENSLAFG00000010220) #20 IBA57 (ENSLAFG00000010222) #21 ENSLAFG00000022315 #22 ENSLAFG00000030495 PRMT2 (ENSLAFG00000009604) S100B (ENSLAFG00000014935) Hyrax MODERN SPECIES 4537 OBSCN (ENSPCAG00000005964) #22 ENSPCAG00000006677 Xenarthra ANCESTRAL SPECIES 596 ENSGT00940000155138.f ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 904 ENSDNOG00000044665 #22 ENSDNOG00000040332 ENSDNOG00000049210 #24 TRIM11 (ENSDNOG00000046467) #23 TRIM17 (ENSDNOG00000001170) #24 H3-4 (ENSDNOG00000047581) ENSDNOG00000041071 #25 H2BC26 (ENSDNOG00000043947) #26 ENSDNOG00000044676 ##26 ENSDNOG00000012828 #27 ENSDNOG00000044824 #25 ENSDNOG00000045637 #28 NABP1 (ENSDNOG00000023585) Armadillo DUPLICATION Armadillo MODERN SPECIES 2365 ENSDNOG00000039640 ENSDNOG00000049106 ENSDNOG00000047752 WNT9A (ENSDNOG00000007791) #14 WNT3A (ENSDNOG00000037172) #15 ENSDNOG00000049038 #16 C1orf35 (ENSDNOG00000040335) #17 MRPL55 (ENSDNOG00000024342) #18 ENSDNOG00000023608 #21 ENSDNOG00000040893 #22 ENSDNOG00000035986 #22 Armadillo MODERN SPECIES 2365 ENSDNOG00000039640 ENSDNOG00000049106 ENSDNOG00000047752 WNT9A (ENSDNOG00000007791) #14 WNT3A (ENSDNOG00000037172) #15 ENSDNOG00000049038 #16 C1orf35 (ENSDNOG00000040335) #17 MRPL55 (ENSDNOG00000024342) #18 ENSDNOG00000023608 #21 ENSDNOG00000040893 #22 ENSDNOG00000035986 #22 Armadillo MODERN SPECIES 2121 ENSDNOG00000037026 #22