Laurasiatheria_c	ANCESTRAL SPECIES	29	ENSGT01100000263486.a.b.a.a.a.a.b ##35	ENSGT01090000260044.A.b.a.a.a.b #33	ENSGT00940000162415 #32	ENSGT00940000161967 #30	ENSGT00940000159380 #11	ENSGT00950000182843.b #12	ENSGT00940000154494.a #13	ENSGT00940000159618 #14	ENSGT00940000160510 #15	ENSGT00950000183080.a.b.a.b.b #16	ENSGT00390000005590 #17	ENSGT00390000010309 #18	ENSGT00940000155815 #19	ENSGT01090000260005.a.a.a.b.a.a.a #20	ENSGT00390000006465 #21	ENSGT00940000154756.A #22	ENSGT00940000160371 #23	ENSGT00940000162155 #24	ENSGT01100000263514.A.e.b #25	ENSGT00940000153092.a.a.c.b #26	ENSGT01100000263474.a.b.b.e.b.a.a	ENSGT00390000009510 #27	ENSGT00940000163997 #28	ENSGT01030000234553.b.b.d.c.a #29
Chiroptera	ANCESTRAL SPECIES	75	ENSGT00940000158134.A #34	ENSGT01090000260044.A.b.a.a.a.b #33	ENSGT00940000162415 #32	ENSGT00940000161967 #30	ENSGT00940000159380 #11	ENSGT00950000182843.b #12	ENSGT00940000154494.a #13	ENSGT00940000159618 #14	ENSGT00940000160510 #15	ENSGT00950000183080.a.b.a.b.b #16	ENSGT00390000005590 #17	ENSGT00390000010309 #18	ENSGT00940000155815 #19	ENSGT01090000260005.a.a.a.b.a.a.a #20	ENSGT00390000006465 #21	ENSGT00940000154756.A #22	ENSGT00940000160371 #23	ENSGT00940000162155 #24	ENSGT01100000263514.A.e.b #25	ENSGT00940000153092.a.a.c.b #26	ENSGT00390000009510 #27	ENSGT00940000163997 #28	ENSGT01030000234553.b.b.d.c.a #29
Microchiroptera	ANCESTRAL SPECIES	63	ENSGT00940000158134.A #34	ENSGT01090000260044.A.b.a.a.a.b #33	ENSGT00940000162415 #32	ENSGT00940000161967 #30	ENSGT00940000159380 #11	ENSGT00950000182843.b #12	ENSGT00940000154494.a #13	ENSGT00940000159618 #14	ENSGT00940000160510 #15	ENSGT00950000183080.a.b.a.b.b #16	ENSGT00390000005590 #17	ENSGT00390000010309 #18	ENSGT00940000155815 #19	ENSGT01090000260005.a.a.a.b.a.a.a #20	ENSGT00390000006465 #21	ENSGT00940000154756.A #22	ENSGT00940000160371 #23	ENSGT00940000162155 #24	ENSGT01100000263514.A.e.b #25	ENSGT00940000153092.a.a.c.b #26	ENSGT00390000009510 #27	ENSGT00940000163997 #28	ENSGT01030000234553.b.b.d.c.a #29
Greater horseshoe bat	MODERN SPECIES	16	GRM6 (ENSRFEG00010020725) #7	ZNF454 (ENSRFEG00010020708) #8	ZFP2 (ENSRFEG00010020696) #9	ENSRFEG00010020667 #10	JMJD4 (ENSRFEG00010020639) #11	SNAP47 (ENSRFEG00010020620) #12	PRSS38 (ENSRFEG00010020586) #13	WNT9A (ENSRFEG00010020564) #14	WNT3A (ENSRFEG00010020529) #15	ENSRFEG00010020502 #16	ENSRFEG00010020459 #17	MRPL55 (ENSRFEG00010020427) #18	ENSRFEG00010020344 #19	GJC2 (ENSRFEG00010020305) #20	IBA57 (ENSRFEG00010020284) #21	OBSCN (ENSRFEG00010012968) #22	TRIM11 (ENSRFEG00010012738) #23	TRIM17 (ENSRFEG00010012551) #24	H3-4 (ENSRFEG00010012529) #25	H2AC25 (ENSRFEG00010012511) #26	RNF187 (ENSRFEG00010012412) #27	ENSRFEG00010012392 #28	ENSRFEG00010012356 #29	ZNF496 (ENSRFEG00010012279) #30	ENSRFEG00010012199 #31	NLRP3 (ENSRFEG00010011921) #32	OR2B11 (ENSRFEG00010011877) #33	GCSAML (ENSRFEG00010011703) #34	OR2G2 (ENSRFEG00010011520) #35	OR2G3 (ENSRFEG00010011480) #36	OR14K1 (ENSRFEG00010011310) #37
Microbat	DUPLICATION
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1239		OR2B11 (ENSMLUG00000014384) #33	NLRP3 (ENSMLUG00000014375) #32	ZNF496 (ENSMLUG00000026878) #30	ENSMLUG00000024170 #11	ENSMLUG00000009770	SNAP47 (ENSMLUG00000013515) #12	PRSS38 (ENSMLUG00000012972) #13	WNT9A (ENSMLUG00000013086) #14	ENSMLUG00000026050 #15	ENSMLUG00000007020 #16	MRPL55 (ENSMLUG00000007037) #18	GUK1 (ENSMLUG00000013049) #19	GJC2 (ENSMLUG00000006940) #20	IBA57 (ENSMLUG00000008724) #21	ENSMLUG00000025341 #22	ENSMLUG00000013117 #22	ENSMLUG00000027104 #22	TRIM11 (ENSMLUG00000009420) #23	RNF187 (ENSMLUG00000002610) #27	TRIM58 (ENSMLUG00000004402)	OR2W3 (ENSMLUG00000005916) ##35	ENSMLUG00000027552	SH3BP5L (ENSMLUG00000002392)	ZNF692 (ENSMLUG00000002398)
Microbat	MODERN SPECIES	1239	OR2B11 (ENSMLUG00000014384) #33	NLRP3 (ENSMLUG00000014375) #32	ZNF496 (ENSMLUG00000026878) #30	ENSMLUG00000024170 #11	ENSMLUG00000009770	SNAP47 (ENSMLUG00000013515) #12	PRSS38 (ENSMLUG00000012972) #13	WNT9A (ENSMLUG00000013086) #14	ENSMLUG00000026050 #15	ENSMLUG00000007020 #16	MRPL55 (ENSMLUG00000007037) #18	GUK1 (ENSMLUG00000013049) #19	GJC2 (ENSMLUG00000006940) #20	IBA57 (ENSMLUG00000008724) #21	ENSMLUG00000025341 #22	ENSMLUG00000013117 #22	ENSMLUG00000027104 #22	TRIM11 (ENSMLUG00000009420) #23	RNF187 (ENSMLUG00000002610) #27	TRIM58 (ENSMLUG00000004402)	OR2W3 (ENSMLUG00000005916) ##35	ENSMLUG00000027552	SH3BP5L (ENSMLUG00000002392)	ZNF692 (ENSMLUG00000002398)
Microbat	MODERN SPECIES	1239	NLRP3 (ENSMLUG00000014375) #32	ZNF496 (ENSMLUG00000026878) #30	ENSMLUG00000024170 #11	ENSMLUG00000009770	SNAP47 (ENSMLUG00000013515) #12	PRSS38 (ENSMLUG00000012972) #13	WNT9A (ENSMLUG00000013086) #14	ENSMLUG00000026050 #15	ENSMLUG00000007020 #16	MRPL55 (ENSMLUG00000007037) #18	GUK1 (ENSMLUG00000013049) #19	GJC2 (ENSMLUG00000006940) #20	IBA57 (ENSMLUG00000008724) #21	ENSMLUG00000025341 #22	ENSMLUG00000013117 #22	ENSMLUG00000027104 #22	TRIM11 (ENSMLUG00000009420) #23	RNF187 (ENSMLUG00000002610) #27	TRIM58 (ENSMLUG00000004402)	OR2W3 (ENSMLUG00000005916) ##35	ENSMLUG00000027552	SH3BP5L (ENSMLUG00000002392)	ZNF692 (ENSMLUG00000002398)
Megabat	MODERN SPECIES	1486																OBSCN (ENSPVAG00000009411) #22
Equus	ANCESTRAL SPECIES	6					ENSGT00940000159380 #11	ENSGT00950000182843.b #12	ENSGT00940000154494.a #13	ENSGT00940000159618 #14	ENSGT00940000160510 #15	ENSGT00950000183080.a.b.a.b.b #16	ENSGT00390000005590 #17	ENSGT00390000010309 #18	ENSGT00940000155815 #19	ENSGT01090000260005.a.a.a.b.a.a.a #20	ENSGT00390000006465 #21	ENSGT00940000154756.A #22	ENSGT00940000160371 #23	ENSGT00940000162155 #24	ENSGT01100000263474.a.b.b.e.b.a.b	ENSGT00390000009510 #27	ENSGT00940000163997.m #28	ENSGT01030000234553.b.b.d.d ##29	ENSGT00940000161967 #30	ENSGT00940000162415 #32	ENSGT01090000260044.A.b.a.a.a.b #33	ENSGT01100000263486.a.b.a.a.a.a.b ##35	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b.c.a ##35	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b.c.b ##35	ENSGT00940000158134.A #34	ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.b #35	ENSGT01060000248581.C.a.b.a.a
Horse	MODERN SPECIES	5						JMJD4 (ENSECAG00000021407) #11	SNAP47 (ENSECAG00000020954) #12	PRSS38 (ENSECAG00000020942) #13	WNT9A (ENSECAG00000020178) #14	WNT3A (ENSECAG00000028812) #15	ARF1 (ENSECAG00000032327) #16	GUK1 (ENSECAG00000019280) #19	ENSECAG00000059239 #17	GJC2 (ENSECAG00000037673) #20	IBA57 (ENSECAG00000006335) #21	OBSCN (ENSECAG00000016720) #22	TRIM11 (ENSECAG00000016373) #23	TRIM17 (ENSECAG00000039891) #24	ENSECAG00000059949	H2BC26 (ENSECAG00000048080)	RNF187 (ENSECAG00000016200) #27	ENSECAG00000040368 #28	ENSECAG00000032464 #28	ENSECAG00000033206 ##29	ZNF496 (ENSECAG00000015844) #30	NLRP3 (ENSECAG00000015382) #32	OR2B11 (ENSECAG00000002900) #33	OR2W29 (ENSECAG00000001770) ##35	OR2C3F (ENSECAG00000031551) ##35	OR2C3 (ENSECAG00000036826) ##35	OR2C3D (ENSECAG00000028047) ##35
Donkey	MODERN SPECIES	29				JMJD4 (ENSEASG00005017516) #11	SNAP47 (ENSEASG00005017519) #12	ENSEASG00005023983	PRSS38 (ENSEASG00005017526) #13	WNT9A (ENSEASG00005017530) #14	WNT3A (ENSEASG00005010564) #15	ENSEASG00005036953	C1orf35 (ENSEASG00005017537) #17	MRPL55 (ENSEASG00005024877) #18	GUK1 (ENSEASG00005017539) #19	GJC2 (ENSEASG00005017541) #20	ENSEASG00005033564 #21	OBSCN (ENSEASG00005017625) #22	TRIM11 (ENSEASG00005017954) #23	TRIM17 (ENSEASG00005017955) #24	ENSEASG00005035131	H2BC26 (ENSEASG00005026831)	ENSEASG00005029469	ENSEASG00005017961 #27	ENSEASG00005024868 #28	ENSEASG00005035367 #28	ENSEASG00005017951 ##29	ENSEASG00005017964 #30	NLRP3 (ENSEASG00005017967) #32	OR2B11 (ENSEASG00005017975) #33	ENSEASG00005017978 ##35	ENSEASG00005038196 ##35	ENSEASG00005028368 #28